Citrus Sinensis ID: 002186
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 955 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FII5 | 1041 | Leucine-rich repeat recep | no | no | 0.945 | 0.867 | 0.396 | 0.0 | |
| Q9FRS6 | 1029 | Leucine-rich repeat recep | no | no | 0.988 | 0.917 | 0.341 | 1e-161 | |
| Q9M0G7 | 1013 | Leucine-rich repeat recep | no | no | 0.963 | 0.908 | 0.357 | 1e-158 | |
| O49545 | 1003 | Leucine-rich repeat recep | no | no | 0.953 | 0.908 | 0.357 | 1e-149 | |
| Q9M2Z1 | 1002 | Leucine-rich repeat recep | no | no | 0.944 | 0.900 | 0.355 | 1e-148 | |
| Q9SYQ8 | 980 | Receptor protein kinase C | no | no | 0.923 | 0.9 | 0.346 | 1e-147 | |
| O65440 | 992 | Leucine-rich repeat recep | no | no | 0.940 | 0.905 | 0.340 | 1e-141 | |
| Q9SGP2 | 996 | Receptor-like protein kin | no | no | 0.901 | 0.864 | 0.324 | 1e-126 | |
| O82318 | 960 | Probably inactive leucine | no | no | 0.928 | 0.923 | 0.336 | 1e-126 | |
| C0LGX3 | 993 | LRR receptor-like serine/ | no | no | 0.914 | 0.879 | 0.321 | 1e-124 |
| >sp|Q9FII5|TDR_ARATH Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana GN=TDR PE=1 SV=1 | Back alignment and function desciption |
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Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/963 (39%), Positives = 547/963 (56%), Gaps = 60/963 (6%)
Query: 44 SLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNEL 103
+ DW VP VN CSWSGV C+ V+ ++LS + LSG +P + +R + L
Sbjct: 52 AFQDWKVP--VNGQNDAVWCSWSGVVCDNVTAQVISLDLSHRNLSGRIPIQ-IRYLSSLL 108
Query: 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSG 163
NS G FP IF+LT L +LDISRN+F FP GI L+ L V +AFSN+F G
Sbjct: 109 YLNLSG-NSLEGSFPTSIFDLTKLTTLDISRNSFDSSFPPGISKLKFLKVFNAFSNNFEG 167
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
+P+++S+L L+ LN GSYF G IP+ +G + L+F+HLAGN+L ++P LG+L +
Sbjct: 168 LLPSDVSRLRFLEELNFGGSYFEGEIPAAYGGLQRLKFIHLAGNVLGGKLPPRLGLLTEL 227
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG 283
HMEIGYN + GNIP + +S ++Y D++ +LSGS+P+EL NL+ LE+LFLF+N G
Sbjct: 228 QHMEIGYNHFNGNIPSEFALLSNLKYFDVSNCSLSGSLPQELGNLSNLETLFLFQNGFTG 287
Query: 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSL 343
++P +S + +LK LD S N+LSG IP F+ LKNL LSL+ N +SG VPE + +LP L
Sbjct: 288 EIPESYSNLKSLKLLDFSSNQLSGSIPSGFSTLKNLTWLSLISNNLSGEVPEGIGELPEL 347
Query: 344 EILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
LF+WNN F+G LP LG N KL +DVS N+F G+IP +C G L+KLILFSN F G
Sbjct: 348 TTLFLWNNNFTGVLPHKLGSNGKLETMDVSNNSFTGTIPSSLCHGNKLYKLILFSNMFEG 407
Query: 404 SLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKL 463
L SL+ C SL R R ++N +G IP+ F L ++ ++DLS N FT IP D A L
Sbjct: 408 ELPKSLTRCESLWRFRSQNNRLNGTIPIGFGSLRNLTFVDLSNNRFTDQIPADFATAPVL 467
Query: 464 EYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSG 523
+Y N+S N +P W P+LQ FSAS N+ G +P + CKS IE N+L+G
Sbjct: 468 QYLNLSTN-FFHRKLPENIWKAPNLQIFSASFSNLIGEIPNYVGCKSFYRIELQGNSLNG 526
Query: 524 TIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSL 583
TIP + +C +L ++L+ N L G IP ++ LP + +DLSHN L+G IP+ FGS ++
Sbjct: 527 TIPWDIGHCEKLLCLNLSQNHLNGIIPWEISTLPSIADVDLSHNLLTGTIPSDFGSSKTI 586
Query: 584 TVLNVSFNDISGSIPSGKVLRLMGSSAYAGNPKLCGAPL-QPCHASVAILG--------- 633
T NVS+N + G IPSG L S ++ N LCG + +PC++ G
Sbjct: 587 TTFNVSYNQLIGPIPSGSFAHL-NPSFFSSNEGLCGDLVGKPCNSDRFNAGNADIDGHHK 645
Query: 634 -----KGTGKLKFVLLLCAGIVMFIAAALLGIFFFRRGGKGH-----------WKMISFL 677
K G + ++L G+ F+ A F G + WK+ +F
Sbjct: 646 EERPKKTAGAIVWILAAAIGVGFFVLVAATRCFQKSYGNRVDGGGRNGGDIGPWKLTAFQ 705
Query: 678 GLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT--------R 729
L FTA+DV+ + T+ + KA +P G ++VKK+ WG R
Sbjct: 706 RL-NFTADDVVECLSKTD-NILGMGSTGTVYKAEMPNGEIIAVKKL-WGKNKENGKIRRR 762
Query: 730 IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE-------KIRTKRD 782
V + +G VRH+N++RLLG C NR LLY+Y+PNG+L + + +
Sbjct: 763 KSGVLAEVDVLGNVRHRNIVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHGGDKTMTAAAE 822
Query: 783 WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842
W A Y+I +GVA+G+C+LHHDC P I H DLK SNI+ D + E +A+FG L Q +
Sbjct: 823 WTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDES 882
Query: 843 -SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLG 901
S A + E+ ++ + D+Y +G I+LEI+T R N +D +
Sbjct: 883 MSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFGEGNSIVDWVRS 942
Query: 902 EMYNENEV--------GSSSSL-QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952
++ + +V G S SL ++E+K +L +ALLCT +P+DRP M + L +L KP
Sbjct: 943 KLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQEAKP 1002
Query: 953 HGK 955
K
Sbjct: 1003 KRK 1005
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Acts with CLE41p and CLE44p peptides as a ligand-receptor pair in a signal transduction pathway involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Mediates repression of tracheary element differentiation and the promotion of procambial cells formation and polar division adjacent to phloem cells in the veins. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9FRS6|PXL1_ARATH Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana GN=PXL1 PE=2 SV=1 | Back alignment and function description |
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Score = 570 bits (1469), Expect = e-161, Method: Compositional matrix adjust.
Identities = 346/1014 (34%), Positives = 563/1014 (55%), Gaps = 70/1014 (6%)
Query: 2 EIFHCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIY 61
+F Y F FV + + + E LL+ KS+L D N+L DW P ++
Sbjct: 5 RLFFLFYYIGFALFPFVSSETFQNSEQEILLAFKSDLFDPSNNLQDWKRPENATTFSELV 64
Query: 62 ACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEI 121
C W+GV C+ N V + LS LSG + + F L L+LS+N+F P +
Sbjct: 65 HCHWTGVHCDANG-YVAKLLLSNMNLSGNVSDQIQS--FPSLQALDLSNNAFESSLPKSL 121
Query: 122 FNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181
NLTSL +D+S N+F G FP G+ L ++A SN+FSG +P ++ L+VL+
Sbjct: 122 SNLTSLKVIDVSVNSFFGTFPYGLGMATGLTHVNASSNNFSGFLPEDLGNATTLEVLDFR 181
Query: 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQL 241
G YF G +PS F + K+L+FL L+GN ++P +G L ++ + +GYN + G IP +
Sbjct: 182 GGYFEGSVPSSFKNLKNLKFLGLSGNNFGGKVPKVIGELSSLETIILGYNGFMGEIPEEF 241
Query: 242 GNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLS 301
G ++ +QYLD+A NL+G IP L L +L +++L++N+L G++P E +T+L LDLS
Sbjct: 242 GKLTRLQYLDLAVGNLTGQIPSSLGQLKQLTTVYLYQNRLTGKLPRELGGMTSLVFLDLS 301
Query: 302 DNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL 361
DN+++G IP +LKNL+LL+LM N+++G +P + +LP+LE+L +W N GSLP +L
Sbjct: 302 DNQITGEIPMEVGELKNLQLLNLMRNQLTGIIPSKIAELPNLEVLELWQNSLMGSLPVHL 361
Query: 362 GRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLE 421
G+NS L+W+DVS+N +G IP +C L KLILF+N+F+G + + +C +LVR+R++
Sbjct: 362 GKNSPLKWLDVSSNKLSGDIPSGLCYSRNLTKLILFNNSFSGQIPEEIFSCPTLVRVRIQ 421
Query: 422 DNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQ 481
N SG IP LP + +++L++N TG IP DI ++ L + ++S N + +
Sbjct: 422 KNHISGSIPAGSGDLPMLQHLELAKNNLTGKIPDDIALSTSLSFIDISFNHLS--SLSSS 479
Query: 482 TWSLPSLQNFSASACNITGNLP-PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDL 540
+S P+LQ F AS N G +P + S+SV++ N+ SG IPE +++ +L ++L
Sbjct: 480 IFSSPNLQTFIASHNNFAGKIPNQIQDRPSLSVLDLSFNHFSGGIPERIASFEKLVSLNL 539
Query: 541 ANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG 600
+N+L+G IP+ LA + +L VLDLS+NSL+G IPA G+ +L +LNVSFN + G IPS
Sbjct: 540 KSNQLVGEIPKALAGMHMLAVLDLSNNSLTGNIPADLGASPTLEMLNVSFNKLDGPIPSN 599
Query: 601 KVLRLMGSSAYAGNPKLCGAPLQPCHASVAILGKGT--GKLK-------FVL---LLCAG 648
+ + GN LCG L PC S+A+ KG G++ F++ ++ A
Sbjct: 600 MLFAAIDPKDLVGNNGLCGGVLPPCSKSLALSAKGRNPGRIHVNHAVFGFIVGTSVIVAM 659
Query: 649 IVMFIAA-------------ALLGIFFFRRGGKGHWKMISFLGLPQFTANDVLRSFNSTE 695
+MF+A A IF + + W++++F L FTA D+L +
Sbjct: 660 GMMFLAGRWIYTRWDLYSNFAREYIFCKKPREEWPWRLVAFQRL-CFTAGDILSHIKESN 718
Query: 696 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---------------TRIKIVSEFITRI 740
+ + +TV+VKK+ W + I+ E + +
Sbjct: 719 IIGMGAIGIVYKAEVMRRPLLTVAVKKL-WRSPSPQNDIEDHHQEEDEEDDILRE-VNLL 776
Query: 741 GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTK------RDWAAKYKIVLGVA 794
G +RH+N++++LG+ +N + ++Y+Y+PNGNL + +K RDW ++Y + +GV
Sbjct: 777 GGLRHRNIVKILGYVHNEREVMMVYEYMPNGNLGTALHSKDEKFLLRDWLSRYNVAVGVV 836
Query: 795 RGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTE-- 852
+GL +LH+DCYP I H D+K++NI+ D N+E +A+FG + L + +A +
Sbjct: 837 QGLNYLHNDCYPPIIHRDIKSNNILLDSNLEARIADFGLAKM-MLHKNETVSMVAGSYGY 895
Query: 853 -SGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE--- 908
+ E+ +K + D+Y G ++LE++T G++ S + + + +NE
Sbjct: 896 IAPEYGYTLKIDEKSDIYSLGVVLLELVT-GKMPIDPSFEDSIDVVEWIRRKVKKNESLE 954
Query: 909 -------VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPHGK 955
G + +E+ L L +ALLCT P DRPS+ + + +L+ KP K
Sbjct: 955 EVIDASIAGDCKHVIEEMLLALRIALLCTAKLPKDRPSIRDVITMLAEAKPRRK 1008
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Involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9M0G7|PXL2_ARATH Leucine-rich repeat receptor-like protein kinase PXL2 OS=Arabidopsis thaliana GN=PXL2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 560 bits (1442), Expect = e-158, Method: Compositional matrix adjust.
Identities = 358/1002 (35%), Positives = 557/1002 (55%), Gaps = 82/1002 (8%)
Query: 11 LFIWLVFVPAVSA------NDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACS 64
LF++ ++ + S+ N LLS+KS LVD N L DW + + C+
Sbjct: 8 LFLYYCYIGSTSSVLASIDNVNELSVLLSVKSTLVDPLNFLKDWKLSDTSD------HCN 61
Query: 65 WSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNL 124
W+GV+CN N V ++L+ L+G + ++ + LV N+S N F P I
Sbjct: 62 WTGVRCNSNGN-VEKLDLAGMNLTGKISDSISQL--SSLVSFNISCNGFESLLPKSI--- 115
Query: 125 TSLISLDISRNNFSGH-FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183
L S+DIS+N+FSG F +SL L+ L+A N+ SG++ ++ L L+VL+L G+
Sbjct: 116 PPLKSIDISQNSFSGSLFLFSNESL-GLVHLNASGNNLSGNLTEDLGNLVSLEVLDLRGN 174
Query: 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGN 243
+F G +PS F + + L FL L+GN L ++P+ LG L ++ +GYN ++G IP + GN
Sbjct: 175 FFQGSLPSSFKNLQKLRFLGLSGNNLTGELPSVLGQLPSLETAILGYNEFKGPIPPEFGN 234
Query: 244 MSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDN 303
++ ++YLD+A LSG IP EL L LE+L L+ N G +P E +TTLK LD SDN
Sbjct: 235 INSLKYLDLAIGKLSGEIPSELGKLKSLETLLLYENNFTGTIPREIGSITTLKVLDFSDN 294
Query: 304 RLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 363
L+G IP LKNL+LL+LM N++SG++P ++ L L++L +WNN SG LP +LG+
Sbjct: 295 ALTGEIPMEITKLKNLQLLNLMRNKLSGSIPPAISSLAQLQVLELWNNTLSGELPSDLGK 354
Query: 364 NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDN 423
NS L+W+DVS+N+F+G IP +C+ G L KLILF+N FTG + +LS C SLVR+R+++N
Sbjct: 355 NSPLQWLDVSSNSFSGEIPSTLCNKGNLTKLILFNNTFTGQIPATLSTCQSLVRVRMQNN 414
Query: 424 SFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTW 483
+G IP+ F +L + ++L+ N +GGIP DI+ + L + + S N ++ +P+
Sbjct: 415 LLNGSIPIGFGKLEKLQRLELAGNRLSGGIPGDISDSVSLSFIDFSRN-QIRSSLPSTIL 473
Query: 484 SLPSLQNFSASACNITGNLP-PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLAN 542
S+ +LQ F + I+G +P F+ C S+S ++ N L+GTIP S+++C +L ++L N
Sbjct: 474 SIHNLQAFLVADNFISGEVPDQFQDCPSLSNLDLSSNTLTGTIPSSIASCEKLVSLNLRN 533
Query: 543 NKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKV 602
N L G IP + + L VLDLS+NSL+G +P G+ +L +LNVS+N ++G +P
Sbjct: 534 NNLTGEIPRQITTMSALAVLDLSNNSLTGVLPESIGTSPALELLNVSYNKLTGPVPINGF 593
Query: 603 LRLMGSSAYAGNPKLCGAPLQPC-------------HASVAILGKGTGKLKFVLLLCAGI 649
L+ + GN LCG L PC H + G G +L GI
Sbjct: 594 LKTINPDDLRGNSGLCGGVLPPCSKFQRATSSHSSLHGKRIVAGWLIG---IASVLALGI 650
Query: 650 VMFIAAALLGIFFF------RRGGKGH--WKMISFLGLPQFTANDVLRSFNSTECEEAAR 701
+ + L ++ KG W++++F L FTA+D+L E
Sbjct: 651 LTIVTRTLYKKWYSNGFCGDETASKGEWPWRLMAFHRL-GFTASDILACIK--ESNMIGM 707
Query: 702 PQSAAGCKAVLPTGITV-SVKKIEWGATRIK--IVSEFITRI---GTVRHKNLIRLLGFC 755
+ KA + TV +VKK+ A I+ +F+ + G +RH+N++RLLGF
Sbjct: 708 GATGIVYKAEMSRSSTVLAVKKLWRSAADIEDGTTGDFVGEVNLLGKLRHRNIVRLLGFL 767
Query: 756 YNRHQAYLLYDYLPNGNLSEKIRTKR-------DWAAKYKIVLGVARGLCFLHHDCYPAI 808
YN ++Y+++ NGNL + I K DW ++Y I LGVA GL +LHHDC+P +
Sbjct: 768 YNDKNMMIVYEFMLNGNLGDAIHGKNAAGRLLVDWVSRYNIALGVAHGLAYLHHDCHPPV 827
Query: 809 PHGDLKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMK 861
H D+K++NI+ D N++ +A+FG K + GS+ IA E+ +K
Sbjct: 828 IHRDIKSNNILLDANLDARIADFGLARMMARKKETVSMVAGSY-GYIA----PEYGYTLK 882
Query: 862 EEMYMDVYGFGEIILEILTN--------GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913
+ +D+Y +G ++LE+LT G + ++ K D + E + VG+
Sbjct: 883 VDEKIDIYSYGVVLLELLTGRRPLEPEFGESVDIVEWVRRKIRDNISLEEALDPNVGNCR 942
Query: 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPHGK 955
+Q+E+ LVL +ALLCT P DRPSM + + +L KP K
Sbjct: 943 YVQEEMLLVLQIALLCTTKLPKDRPSMRDVISMLGEAKPRRK 984
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Involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49545|BAME1_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 530 bits (1364), Expect = e-149, Method: Compositional matrix adjust.
Identities = 345/965 (35%), Positives = 519/965 (53%), Gaps = 54/965 (5%)
Query: 22 SANDPYSE--ALLSLKSELV---DDFNS-LHDWFVPPGVNPAGKIYACSWSGVKCNKNNT 75
+A+ P SE ALLSLK+ L DD NS L W V C+W GV C+ +
Sbjct: 18 TASRPISEFRALLSLKTSLTGAGDDKNSPLSSWKVSTSF--------CTWIGVTCDVSRR 69
Query: 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN 135
V ++LS LSG L P L +L+L+ N SG P EI +L+ L L++S N
Sbjct: 70 HVTSLDLSGLNLSGTL--SPDVSHLRLLQNLSLAENLISGPIPPEISSLSGLRHLNLSNN 127
Query: 136 NFSGHFPGGIQS-LRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFG 194
F+G FP I S L NL VLD ++N+ +G +P ++ L L+ L+L G+YF+G IP +G
Sbjct: 128 VFNGSFPDEISSGLVNLRVLDVYNNNLTGDLPVSVTNLTQLRHLHLGGNYFAGKIPPSYG 187
Query: 195 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGY-NFYQGNIPWQLGNMSEVQYLDIA 253
S+ +E+L ++GN L +IP E+G L T+ + IGY N ++ +P ++GN+SE+ D A
Sbjct: 188 SWPVIEYLAVSGNELVGKIPPEIGNLTTLRELYIGYYNAFEDGLPPEIGNLSELVRFDGA 247
Query: 254 GANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESF 313
L+G IP E+ L KL++LFL N +G + WE +++LKS+DLS+N +G IP SF
Sbjct: 248 NCGLTGEIPPEIGKLQKLDTLFLQVNVFSGPLTWELGTLSSLKSMDLSNNMFTGEIPASF 307
Query: 314 ADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVS 373
A+LKNL LL+L N++ G +PE + LP LE+L +W N F+GS+P+ LG N KL VD+S
Sbjct: 308 AELKNLTLLNLFRNKLHGEIPEFIGDLPELEVLQLWENNFTGSIPQKLGENGKLNLVDLS 367
Query: 374 TNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKF 433
+N G++PP++CSG L LI N GS+ SL C SL R+R+ +N +G IP
Sbjct: 368 SNKLTGTLPPNMCSGNKLETLITLGNFLFGSIPDSLGKCESLTRIRMGENFLNGSIPKGL 427
Query: 434 SQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSA 493
LP + ++L N +G +P + L ++SNN +L G +P + +Q
Sbjct: 428 FGLPKLTQVELQDNYLSGELPVAGGVSVNLGQISLSNN-QLSGPLPPAIGNFTGVQKLLL 486
Query: 494 SACNITGNLP-PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEV 552
G +P + +S I+ N SG I +S C L +DL+ N+L G IP
Sbjct: 487 DGNKFQGPIPSEVGKLQQLSKIDFSHNLFSGRIAPEISRCKLLTFVDLSRNELSGEIPNE 546
Query: 553 LARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSAYA 612
+ + +L L+LS N L G IP S SLT L+ S+N++SG +P +++
Sbjct: 547 ITAMKILNYLNLSRNHLVGSIPGSISSMQSLTSLDFSYNNLSGLVPGTGQFSYFNYTSFL 606
Query: 613 GNPKLCGAPLQPCHASVAILGK---------GTGKLKFVLLLCAGIVMFIAAALLGIFFF 663
GNP LCG L PC VA G + KL VL L + F A++
Sbjct: 607 GNPDLCGPYLGPCKDGVAKGGHQSHSKGPLSASMKLLLVLGLLVCSIAFAVVAIIKARSL 666
Query: 664 RRGGKGH-WKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGC--KAVLPTGITVSV 720
++ + W++ +F L FT +DVL S E+ + AG K V+P G V+V
Sbjct: 667 KKASESRAWRLTAFQRL-DFTCDDVLDSLK----EDNIIGKGGAGIVYKGVMPNGDLVAV 721
Query: 721 KKI---EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 777
K++ G++ + I +G +RH++++RLLGFC N L+Y+Y+PNG+L E +
Sbjct: 722 KRLAAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVL 781
Query: 778 RTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833
K+ W +YKI L A+GLC+LHHDC P I H D+K++NI+ D N E H+A+FG
Sbjct: 782 HGKKGGHLHWDTRYKIALEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGL 841
Query: 834 -KYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEILTN----GRLT 885
K+L + IA + + E+ +K + DVY FG ++LE++T G
Sbjct: 842 AKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFG 901
Query: 886 NAGSSLQ--NKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 943
+ +Q K D + + SS E+ V VA+LC +RP+M E
Sbjct: 902 DGVDIVQWVRKMTDSNKDSVLKVLDPRLSSIPIHEVTHVFYVAMLCVEEQAVERPTMREV 961
Query: 944 LKLLS 948
+++L+
Sbjct: 962 VQILT 966
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9M2Z1|BAME2_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 OS=Arabidopsis thaliana GN=BAM2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 526 bits (1356), Expect = e-148, Method: Compositional matrix adjust.
Identities = 338/952 (35%), Positives = 516/952 (54%), Gaps = 50/952 (5%)
Query: 29 EALLSLKSELVDDFNS--LHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKG 86
ALLSLKS D +S L W + CSW+GV C+ + V ++LS
Sbjct: 29 HALLSLKSSFTIDEHSPLLTSWNL--------STTFCSWTGVTCDVSLRHVTSLDLSGLN 80
Query: 87 LSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQ 146
LSG L + L +L+L+ N SG P +I NL L L++S N F+G FP +
Sbjct: 81 LSGTLSSDVAHLPL--LQNLSLAANQISGPIPPQISNLYELRHLNLSNNVFNGSFPDELS 138
Query: 147 S-LRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205
S L NL VLD ++N+ +G +P ++ L L+ L+L G+YFSG IP+ +G++ LE+L ++
Sbjct: 139 SGLVNLRVLDLYNNNLTGDLPVSLTNLTQLRHLHLGGNYFSGKIPATYGTWPVLEYLAVS 198
Query: 206 GNLLNDQIPAELGMLKTVTHMEIGY-NFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264
GN L +IP E+G L T+ + IGY N ++ +P ++GN+SE+ D A L+G IP E
Sbjct: 199 GNELTGKIPPEIGNLTTLRELYIGYYNAFENGLPPEIGNLSELVRFDAANCGLTGEIPPE 258
Query: 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSL 324
+ L KL++LFL N G + E +++LKS+DLS+N +G IP SF+ LKNL LL+L
Sbjct: 259 IGKLQKLDTLFLQVNAFTGTITQELGLISSLKSMDLSNNMFTGEIPTSFSQLKNLTLLNL 318
Query: 325 MYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD 384
N++ G +PE + ++P LE+L +W N F+GS+P+ LG N +L +D+S+N G++PP+
Sbjct: 319 FRNKLYGAIPEFIGEMPELEVLQLWENNFTGSIPQKLGENGRLVILDLSSNKLTGTLPPN 378
Query: 385 ICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDL 444
+CSG L LI N GS+ SL C SL R+R+ +N +G IP + LP ++ ++L
Sbjct: 379 MCSGNRLMTLITLGNFLFGSIPDSLGKCESLTRIRMGENFLNGSIPKELFGLPKLSQVEL 438
Query: 445 SRNGFTGGIPTDINQAS-KLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLP 503
N TG +P S L ++SNN +L G +PA +L +Q +G++P
Sbjct: 439 QDNYLTGELPISGGGVSGDLGQISLSNN-QLSGSLPAAIGNLSGVQKLLLDGNKFSGSIP 497
Query: 504 P-FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVL 562
P + +S ++ N SG I +S C L +DL+ N+L G IP L + +L L
Sbjct: 498 PEIGRLQQLSKLDFSHNLFSGRIAPEISRCKLLTFVDLSRNELSGDIPNELTGMKILNYL 557
Query: 563 DLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSAYAGNPKLCGAPL 622
+LS N L G IP S SLT ++ S+N++SG +PS +++ GN LCG L
Sbjct: 558 NLSRNHLVGSIPVTIASMQSLTSVDFSYNNLSGLVPSTGQFSYFNYTSFVGNSHLCGPYL 617
Query: 623 QPC----HASVAILGKGTGKLKFVLLLCAGIVMFIAAALLGIFFFRRGGKGH-WKMISFL 677
PC H S T KL VL L ++F A++ R + W++ +F
Sbjct: 618 GPCGKGTHQSHVKPLSATTKLLLVLGLLFCSMVFAIVAIIKARSLRNASEAKAWRLTAFQ 677
Query: 678 GLPQFTANDVLRSFNSTECEEAARPQSAAGC--KAVLPTGITVSVKKI---EWGATRIKI 732
L FT +DVL S E+ + AG K +P G V+VK++ G++
Sbjct: 678 RL-DFTCDDVLDSLK----EDNIIGKGGAGIVYKGTMPKGDLVAVKRLATMSHGSSHDHG 732
Query: 733 VSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR----DWAAKYK 788
+ I +G +RH++++RLLGFC N L+Y+Y+PNG+L E + K+ W +YK
Sbjct: 733 FNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWNTRYK 792
Query: 789 IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-KYLTQLADGSFPAK 847
I L A+GLC+LHHDC P I H D+K++NI+ D N E H+A+FG K+L +
Sbjct: 793 IALEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSA 852
Query: 848 IAWTE---SGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY 904
IA + + E+ +K + DVY FG ++LE++T + G I + M
Sbjct: 853 IAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGKK--PVGEFGDGVDIVQWVRSMT 910
Query: 905 NEN--------EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948
+ N ++ SS E+ V VALLC +RP+M E +++L+
Sbjct: 911 DSNKDCVLKVIDLRLSSVPVHEVTHVFYVALLCVEEQAVERPTMREVVQILT 962
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SYQ8|CLV1_ARATH Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 523 bits (1347), Expect = e-147, Method: Compositional matrix adjust.
Identities = 339/978 (34%), Positives = 534/978 (54%), Gaps = 96/978 (9%)
Query: 29 EALLSLKSELVD-DFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGL 87
E LL+LKS ++ + LHDW ++ + CS+SGV C+ ++ V+ +N+S L
Sbjct: 29 EVLLNLKSSMIGPKGHGLHDW-----IHSSSPDAHCSFSGVSCD-DDARVISLNVSFTPL 82
Query: 88 SGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN-NFSGHFPGGI- 145
G + P LV+L L+ N+F+G+ P+E+ +LTSL L+IS N N +G FPG I
Sbjct: 83 FGTI--SPEIGMLTHLVNLTLAANNFTGELPLEMKSLTSLKVLNISNNGNLTGTFPGEIL 140
Query: 146 QSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205
+++ +L VLD ++N+F+G +P E+S+L+ LK L+ G++FSG IP +G +SLE+L L
Sbjct: 141 KAMVDLEVLDTYNNNFNGKLPPEMSELKKLKYLSFGGNFFSGEIPESYGDIQSLEYLGLN 200
Query: 206 GNLLNDQIPAELGMLKTVTHMEIGY-NFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264
G L+ + PA L LK + M IGY N Y G +P + G +++++ LD+A L+G IP
Sbjct: 201 GAGLSGKSPAFLSRLKNLREMYIGYYNSYTGGVPPEFGGLTKLEILDMASCTLTGEIPTS 260
Query: 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSL 324
LSNL L +LFL N L G +P E S + +LKSLDLS N+L+G IP+SF +L N+ L++L
Sbjct: 261 LSNLKHLHTLFLHINNLTGHIPPELSGLVSLKSLDLSINQLTGEIPQSFINLGNITLINL 320
Query: 325 MYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD 384
N + G +PE++ +LP LE+ +W N F+ LP NLGRN L +DVS N+ G IP D
Sbjct: 321 FRNNLYGQIPEAIGELPKLEVFEVWENNFTLQLPANLGRNGNLIKLDVSDNHLTGLIPKD 380
Query: 385 ICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDL 444
+C G L LIL +N F G + L C SL ++R+ N +G +P LP + I+L
Sbjct: 381 LCRGEKLEMLILSNNFFFGPIPEELGKCKSLTKIRIVKNLLNGTVPAGLFNLPLVTIIEL 440
Query: 445 SRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLP- 503
+ N F+G +P ++ L+ +SNN G IP + P+LQ GN+P
Sbjct: 441 TDNFFSGELPVTMS-GDVLDQIYLSNN-WFSGEIPPAIGNFPNLQTLFLDRNRFRGNIPR 498
Query: 504 PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLD 563
K +S I + NN++G IP+S+S C L +DL+ N++ G IP+ + + LG L+
Sbjct: 499 EIFELKHLSRINTSANNITGGIPDSISRCSTLISVDLSRNRINGEIPKGINNVKNLGTLN 558
Query: 564 LSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSAYAGNPKLC----- 618
+S N L+G IP G+ +SLT L++SFND+SG +P G + +++AGN LC
Sbjct: 559 ISGNQLTGSIPTGIGNMTSLTTLDLSFNDLSGRVPLGGQFLVFNETSFAGNTYLCLPHRV 618
Query: 619 GAPLQPCHASVAILGKGTGKLKFVLLLCAGIVMFIAAALLGIFF----FRRGGKGH---- 670
P +P G+ + L + IV+ + AA+ G+ R+ K
Sbjct: 619 SCPTRP--------GQTSDHNHTALFSPSRIVITVIAAITGLILISVAIRQMNKKKNQKS 670
Query: 671 --WKMISFLGLPQFTANDVLRSFNSTEC--EEAARPQSAAGC--KAVLPTGITVSVKKI- 723
WK+ +F L F + DVL EC EE + AG + +P + V++K++
Sbjct: 671 LAWKLTAFQKL-DFKSEDVL------ECLKEENIIGKGGAGIVYRGSMPNNVDVAIKRLV 723
Query: 724 --EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR 781
G + +E I +G +RH++++RLLG+ N+ LLY+Y+PNG+L E + +
Sbjct: 724 GRGTGRSDHGFTAE-IQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSK 782
Query: 782 ----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-KYL 836
W ++++ + A+GLC+LHHDC P I H D+K++NI+ D + E H+A+FG K+L
Sbjct: 783 GGHLQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFL 842
Query: 837 TQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 893
A + IA + + E+ +K + DVY FG ++LE++ AG
Sbjct: 843 VDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELI-------AGK---- 891
Query: 894 KPIDGLLGEMYN--------ENEVGSSSSLQDEIKL---------------VLDVALLCT 930
KP+ G GE + E E+ S + + V +A++C
Sbjct: 892 KPV-GEFGEGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRLTGYPLTSVIHVFKIAMMCV 950
Query: 931 RSTPSDRPSMEEALKLLS 948
+ RP+M E + +L+
Sbjct: 951 EEEAAARPTMREVVHMLT 968
|
Involved in the detection of CLV3 and CLV3-like peptides, that act as extracellular signals regulating meristem maintenance. Acts with CLV3 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O65440|BAME3_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana GN=BAM3 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 501 bits (1291), Expect = e-141, Method: Compositional matrix adjust.
Identities = 333/979 (34%), Positives = 512/979 (52%), Gaps = 81/979 (8%)
Query: 28 SEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGL 87
+ L+SLK SL W +P N CSW+GV C+ N + ++LS +
Sbjct: 35 ANVLISLKQSFDSYDPSLDSWNIP-NFNSL-----CSWTGVSCDNLNQSITRLDLSNLNI 88
Query: 88 SGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPG-GIQ 146
SG + + R+ LV L++S NSFSG+ P EI+ L+ L L+IS N F G G
Sbjct: 89 SGTISPEISRLS-PSLVFLDISSNSFSGELPKEIYELSGLEVLNISSNVFEGELETRGFS 147
Query: 147 SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 206
+ L+ LDA+ NSF+GS+P ++ L L+ L+L G+YF G IP +GSF SL+FL L+G
Sbjct: 148 QMTQLVTLDAYDNSFNGSLPLSLTTLTRLEHLDLGGNYFDGEIPRSYGSFLSLKFLSLSG 207
Query: 207 NLLNDQIPAELGMLKTVTHMEIGY-NFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKEL 265
N L +IP EL + T+ + +GY N Y+G IP G + + +LD+A +L GSIP EL
Sbjct: 208 NDLRGRIPNELANITTLVQLYLGYYNDYRGGIPADFGRLINLVHLDLANCSLKGSIPAEL 267
Query: 266 SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325
NL LE LFL N+L G VP E +T+LK+LDLS+N L G IP + L+ L+L +L
Sbjct: 268 GNLKNLEVLFLQTNELTGSVPRELGNMTSLKTLDLSNNFLEGEIPLELSGLQKLQLFNLF 327
Query: 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDI 385
+N + G +PE + +LP L+IL +W+N F+G +P LG N L +D+STN G IP +
Sbjct: 328 FNRLHGEIPEFVSELPDLQILKLWHNNFTGKIPSKLGSNGNLIEIDLSTNKLTGLIPESL 387
Query: 386 CSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLS 445
C G L LILF+N G L L C L R RL N + ++P LP+++ ++L
Sbjct: 388 CFGRRLKILILFNNFLFGPLPEDLGQCEPLWRFRLGQNFLTSKLPKGLIYLPNLSLLELQ 447
Query: 446 RNGFTGGIPTDI---NQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNL 502
N TG IP + Q S L N+SNN +L G IP +L SLQ A ++G +
Sbjct: 448 NNFLTGEIPEEEAGNAQFSSLTQINLSNN-RLSGPIPGSIRNLRSLQILLLGANRLSGQI 506
Query: 503 P-PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGV 561
P S KS+ I+ NN SG P +C+ L +DL++N++ G IP ++++ +L
Sbjct: 507 PGEIGSLKSLLKIDMSRNNFSGKFPPEFGDCMSLTYLDLSHNQISGQIPVQISQIRILNY 566
Query: 562 LDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSAYAGNPKLCGAP 621
L++S NS + +P + G SLT + S N+ SGS+P+ ++++ GNP LCG
Sbjct: 567 LNVSWNSFNQSLPNELGYMKSLTSADFSHNNFSGSVPTSGQFSYFNNTSFLGNPFLCGFS 626
Query: 622 LQPCHAS-----VAILGKGTGKLKFVLLLCAGIVMFIAAALLGIFF----------FRRG 666
PC+ S +L + + + + + + + F R+
Sbjct: 627 SNPCNGSQNQSQSQLLNQNNARSRGEISAKFKLFFGLGLLGFFLVFVVLAVVKNRRMRKN 686
Query: 667 GKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAG----CKAVLPTGITVSVKK 722
WK+I F L RS + EC + G K V+P G V+VKK
Sbjct: 687 NPNLWKLIGFQKLG-------FRSEHILECVKENHVIGKGGRGIVYKGVMPNGEEVAVKK 739
Query: 723 ---IEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRT 779
I G++ ++ I +G +RH+N++RLL FC N+ L+Y+Y+PNG+L E +
Sbjct: 740 LLTITKGSSHDNGLAAEIQTLGRIRHRNIVRLLAFCSNKDVNLLVYEYMPNGSLGEVLHG 799
Query: 780 KR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835
K W + +I L A+GLC+LHHDC P I H D+K++NI+ E H+A+FG
Sbjct: 800 KAGVFLKWETRLQIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLGPEFEAHVADFGLAK 859
Query: 836 LTQLADGSFP--AKIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSS 890
+G+ + IA + + E+ ++ + DVY FG ++LE++T GR
Sbjct: 860 FMMQDNGASECMSSIAGSYGYIAPEYAYTLRIDEKSDVYSFGVVLLELIT-GR------- 911
Query: 891 LQNKPIDGLLGE---MYNENEVGSSSSLQDEIKLVLD---------------VALLCTRS 932
KP+D E + +++ ++ + Q +K++ VA+LC +
Sbjct: 912 ---KPVDNFGEEGIDIVQWSKIQTNCNRQGVVKIIDQRLSNIPLAEAMELFFVAMLCVQE 968
Query: 933 TPSDRPSMEEALKLLSGLK 951
+RP+M E ++++S K
Sbjct: 969 HSVERPTMREVVQMISQAK 987
|
Necessary for male gametophyte development, as well as ovule specification and function. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 304/936 (32%), Positives = 477/936 (50%), Gaps = 75/936 (8%)
Query: 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF 122
C WSGV C + + V ++LS L+G P R+ + L L+L +NS + P+ I
Sbjct: 48 CRWSGVSCAGDFSSVTSVDLSSANLAGPFPSVICRL--SNLAHLSLYNNSINSTLPLNIA 105
Query: 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182
SL +LD+S+N +G P + + L+ LD N+FSG +PA + E+L+VL+L
Sbjct: 106 ACKSLQTLDLSQNLLTGELPQTLADIPTLVHLDLTGNNFSGDIPASFGKFENLEVLSLVY 165
Query: 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLN-DQIPAELGMLKTVTHMEIGYNFYQGNIPWQL 241
+ G IP G+ +L+ L+L+ N + +IP E G L + M + G IP L
Sbjct: 166 NLLDGTIPPFLGNISTLKMLNLSYNPFSPSRIPPEFGNLTNLEVMWLTECHLVGQIPDSL 225
Query: 242 GNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLS 301
G +S++ LD+A +L G IP L LT + + L+ N L G++P E + +L+ LD S
Sbjct: 226 GQLSKLVDLDLALNDLVGHIPPSLGGLTNVVQIELYNNSLTGEIPPELGNLKSLRLLDAS 285
Query: 302 DNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL 361
N+L+G IP+ + L L+L N + G +P S+ P+L + I+ N +G LP++L
Sbjct: 286 MNQLTGKIPDELCRVP-LESLNLYENNLEGELPASIALSPNLYEIRIFGNRLTGGLPKDL 344
Query: 362 GRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLE 421
G NS LRW+DVS N F+G +P D+C+ G L +L++ N+F+G + SL++C SL R+RL
Sbjct: 345 GLNSPLRWLDVSENEFSGDLPADLCAKGELEELLIIHNSFSGVIPESLADCRSLTRIRLA 404
Query: 422 DNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQ 481
N FSG +P F LP +N ++L N F+G I I AS L +SNN + G +P +
Sbjct: 405 YNRFSGSVPTGFWGLPHVNLLELVNNSFSGEISKSIGGASNLSLLILSNN-EFTGSLPEE 463
Query: 482 TWSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDL 540
SL +L SAS +G+LP S + ++ H N SG + + + +L ++L
Sbjct: 464 IGSLDNLNQLSASGNKFSGSLPDSLMSLGELGTLDLHGNQFSGELTSGIKSWKKLNELNL 523
Query: 541 ANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG 600
A+N+ G IP+ + L VL LDLS N SG+IP S L LN+S+N +SG +P
Sbjct: 524 ADNEFTGKIPDEIGSLSVLNYLDLSGNMFSGKIPVSLQSL-KLNQLNLSYNRLSGDLPP- 581
Query: 601 KVLRLMGSSAYAGNPKLCGAPLQPCHASVAILGKGTGKLKFVLLLCAGIVMFIAAALLGI 660
+ + M +++ GNP LCG C + +G L + + A +V+ A
Sbjct: 582 SLAKDMYKNSFIGNPGLCGDIKGLCGSENEAKKRGYVWLLRSIFVLAAMVLLAGVAW--- 638
Query: 661 FFF--------RRGGKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVL 712
F+F R + W ++SF L F+ +++L S + A S K VL
Sbjct: 639 FYFKYRTFKKARAMERSKWTLMSFHKL-GFSEHEILESLDEDNVIGAG--ASGKVYKVVL 695
Query: 713 PTGITVSVKKIEWGATR----------------IKIVSEFITRIGTVRHKNLIRLLGFCY 756
G TV+VK++ G+ + + + +G +RHKN+++L C
Sbjct: 696 TNGETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCS 755
Query: 757 NRHQAYLLYDYLPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGD 812
R L+Y+Y+PNG+L + + + + W ++KI+L A GL +LHHD P I H D
Sbjct: 756 TRDCKLLVYEYMPNGSLGDLLHSSKGGMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRD 815
Query: 813 LKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESG------EFYNAMKEEMYM 866
+K++NI+ D + +A+FG L G P ++ E+ ++
Sbjct: 816 IKSNNILIDGDYGARVADFGVAKAVDLT-GKAPKSMSVIAGSCGYIAPEYAYTLRVNEKS 874
Query: 867 DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS-------------- 912
D+Y FG +ILEI+T R P+D LGE V S+
Sbjct: 875 DIYSFGVVILEIVTRKR-----------PVDPELGEKDLVKWVCSTLDQKGIEHVIDPKL 923
Query: 913 -SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 947
S ++EI +L+V LLCT P +RPSM +K+L
Sbjct: 924 DSCFKEEISKILNVGLLCTSPLPINRPSMRRVVKML 959
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O82318|Y2579_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS=Arabidopsis thaliana GN=At2g25790 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 330/981 (33%), Positives = 499/981 (50%), Gaps = 94/981 (9%)
Query: 7 LYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWS 66
L LF + + AN+ E LLS KS + D L W + + C WS
Sbjct: 13 LITTLFFLFLNFSCLHANEL--ELLLSFKSSIQDPLKHLSSW------SYSSTNDVCLWS 64
Query: 67 GVKCNKNNTIVVGINLSMKGLSGA-LPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLT 125
GV CN N + VV ++LS K +SG L R+ F L +NLS+N+ SG P +IF +
Sbjct: 65 GVVCN-NISRVVSLDLSGKNMSGQILTAATFRLPF--LQTINLSNNNLSGPIPHDIFTTS 121
Query: 126 S--LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183
S L L++S NNFSG P G L NL LD +N F+G + +I +L+VL+L G+
Sbjct: 122 SPSLRYLNLSNNNFSGSIPRGF--LPNLYTLDLSNNMFTGEIYNDIGVFSNLRVLDLGGN 179
Query: 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGN 243
+G +P G+ LEFL LA N L +P ELG +K + + +GYN G IP+Q+G
Sbjct: 180 VLTGHVPGYLGNLSRLEFLTLASNQLTGGVPVELGKMKNLKWIYLGYNNLSGEIPYQIGG 239
Query: 244 MSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDN 303
+S + +LD+ NLSG IP L +L KLE +FL++N+L+GQ+P + L SLD SDN
Sbjct: 240 LSSLNHLDLVYNNLSGPIPPSLGDLKKLEYMFLYQNKLSGQIPPSIFSLQNLISLDFSDN 299
Query: 304 RLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 363
LSG IPE A +++L +L L N ++G +PE + LP L++L +W+N FSG +P NLG+
Sbjct: 300 SLSGEIPELVAQMQSLEILHLFSNNLTGKIPEGVTSLPRLKVLQLWSNRFSGGIPANLGK 359
Query: 364 NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDN 423
++ L +D+STNN G +P +C G L KLILFSN+ + PSL C SL R+RL++N
Sbjct: 360 HNNLTVLDLSTNNLTGKLPDTLCDSGHLTKLILFSNSLDSQIPPSLGMCQSLERVRLQNN 419
Query: 424 SFSGEIPLKFSQLPDINYIDLSRNGFTGGIPT-DINQASKLEYFNVSNNPKLGGMIPAQT 482
FSG++P F++L +N++DLS N G I T D+ Q LE ++S N K G +P +
Sbjct: 420 GFSGKLPRGFTKLQLVNFLDLSNNNLQGNINTWDMPQ---LEMLDLSVN-KFFGELPDFS 475
Query: 483 WSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLA 541
S L+ S I+G +P + I ++ N ++G IP +S+C L +DL+
Sbjct: 476 RS-KRLKKLDLSRNKISGVVPQGLMTFPEIMDLDLSENEITGVIPRELSSCKNLVNLDLS 534
Query: 542 NNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGK 601
+N G IP A VL LDLS N LSG+IP G+ SL +N+S N + GS+P
Sbjct: 535 HNNFTGEIPSSFAEFQVLSDLDLSCNQLSGEIPKNLGNIESLVQVNISHNLLHGSLPFTG 594
Query: 602 VLRLMGSSAYAGNPKLC----GAPLQPCHASVAILGKGTGKLKFVLLLCAGIVMFIAAAL 657
+ ++A GN LC + L+PC ++ K + K + L++ + F+A +
Sbjct: 595 AFLAINATAVEGNIDLCSENSASGLRPC----KVVRKRSTK-SWWLIITSTFAAFLAVLV 649
Query: 658 LGIFFFRRGGKGH---------------WKMISFLGLPQFTANDVLRSFNSTECEEAARP 702
G F + H W+ QF + ++SF + +
Sbjct: 650 SGFFIVLVFQRTHNVLEVKKVEQEDGTKWET-------QFFDSKFMKSFTVNTILSSLKD 702
Query: 703 QSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQA 761
Q+ V G+ VK+++ + + E I+ + + HKN+++++ C + A
Sbjct: 703 QNV----LVDKNGVHFVVKEVK----KYDSLPEMISDMRKLSDHKNILKIVATCRSETVA 754
Query: 762 YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
YL+++ + LS+ + + W + KI+ G+ L FLH C PA+ G+L NIV D
Sbjct: 755 YLIHEDVEGKRLSQ-VLSGLSWERRRKIMKGIVEALRFLHCRCSPAVVAGNLSPENIVID 813
Query: 822 ENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT- 880
EP L D ++ A E+ E + D+YGFG ++L +LT
Sbjct: 814 VTDEPRLCL--GLPGLLCMDAAYMAP----ETREHKEMTSKS---DIYGFGILLLHLLTG 864
Query: 881 -------------NGRLTN-AGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926
NG L A S N ID + + +S Q EI V+++A
Sbjct: 865 KCSSSNEDIESGVNGSLVKWARYSYSNCHIDTWIDSSID------TSVHQREIVHVMNLA 918
Query: 927 LLCTRSTPSDRPSMEEALKLL 947
L CT P +RP L+ L
Sbjct: 919 LKCTAIDPQERPCTNNVLQAL 939
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|C0LGX3|HSL2_ARATH LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 446 bits (1148), Expect = e-124, Method: Compositional matrix adjust.
Identities = 321/999 (32%), Positives = 494/999 (49%), Gaps = 126/999 (12%)
Query: 35 KSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGK 94
K+ L D +L DW + G N + C+W+G+ C+ KG S A+
Sbjct: 36 KTRLFDPDGNLQDWVIT-GDNRS----PCNWTGITCHIR-----------KGSSLAV--- 76
Query: 95 PLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSL-RNLLV 153
++LS + SG FP + +LI++ +S+NN +G SL L
Sbjct: 77 ---------TTIDLSGYNISGGFPYGFCRIRTLINITLSQNNLNGTIDSAPLSLCSKLQN 127
Query: 154 LDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQI 213
L N+FSG +P + L+VL L + F+G IP +G +L+ L+L GN L+ +
Sbjct: 128 LILNQNNFSGKLPEFSPEFRKLRVLELESNLFTGEIPQSYGRLTALQVLNLNGNPLSGIV 187
Query: 214 PAELGMLKTVTHMEIGY-NFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLE 272
PA LG L +T +++ Y +F IP LGN+S + L + +NL G IP + NL LE
Sbjct: 188 PAFLGYLTELTRLDLAYISFDPSPIPSTLGNLSNLTDLRLTHSNLVGEIPDSIMNLVLLE 247
Query: 273 SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332
+L L N L G++P R+ ++ ++L DNRLSG +PES +L LR + N ++G
Sbjct: 248 NLDLAMNSLTGEIPESIGRLESVYQIELYDNRLSGKLPESIGNLTELRNFDVSQNNLTGE 307
Query: 333 VPESLVQL-----------------------PSLEILFIWNNYFSGSLPENLGRNSKLRW 369
+PE + L P+L I+NN F+G+LP NLG+ S++
Sbjct: 308 LPEKIAALQLISFNLNDNFFTGGLPDVVALNPNLVEFKIFNNSFTGTLPRNLGKFSEISE 367
Query: 370 VDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEI 429
DVSTN F+G +PP +C L K+I FSN +G + S +C SL +R+ DN SGE+
Sbjct: 368 FDVSTNRFSGELPPYLCYRRKLQKIITFSNQLSGEIPESYGDCHSLNYIRMADNKLSGEV 427
Query: 430 PLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQ 489
P +F +LP + N G IP I++A L +S N G+IP + L L+
Sbjct: 428 PARFWELPLTRLELANNNQLQGSIPPSISKARHLSQLEISAN-NFSGVIPVKLCDLRDLR 486
Query: 490 NFSASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGS 548
S + G++P K++ +E N L G IP SVS+C EL ++L+NN+L G
Sbjct: 487 VIDLSRNSFLGSIPSCINKLKNLERVEMQENMLDGEIPSSVSSCTELTELNLSNNRLRGG 546
Query: 549 IPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGS 608
IP L LPVL LDLS+N L+G+IPA+ L NVS N + G IPSG +
Sbjct: 547 IPPELGDLPVLNYLDLSNNQLTGEIPAELLRL-KLNQFNVSDNKLYGKIPSGFQQDIFRP 605
Query: 609 SAYAGNPKLCGA---PLQPCHASVAILGKGTGKLKFVLLLCAGIVMFIAAALLGIF---- 661
S + GNP LC P++PC + + +++L + ++ + AL+ +F
Sbjct: 606 S-FLGNPNLCAPNLDPIRPCRSK--------RETRYILPISILCIVALTGALVWLFIKTK 656
Query: 662 -FFRRGGKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSV 720
F+R K K+ F + FT D+ TE S + L +G T++V
Sbjct: 657 PLFKRKPKRTNKITIFQRV-GFTEEDIYPQL--TEDNIIGSGGSGLVYRVKLKSGQTLAV 713
Query: 721 KKIEWGATRIKIVSEFITR-----IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE 775
KK+ WG T K SE + R +G VRH N+++LL C +L+Y+++ NG+L +
Sbjct: 714 KKL-WGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGD 772
Query: 776 KIRTKR--------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
+ +++ DW ++ I +G A+GL +LHHD P I H D+K++NI+ D M+P
Sbjct: 773 VLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPR 832
Query: 828 LAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEM--------YMDVYGFGEIILEIL 879
+A+FG + D + ++ + Y + E DVY FG ++LE++
Sbjct: 833 VADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELI 892
Query: 880 TNGRLTNAGSSLQNKPIDGLLGE-------------MYNENEVGSSSSLQ---------- 916
T G+ N S +NK I E N++ +G+ L
Sbjct: 893 T-GKRPNDSSFGENKDIVKFAMEAALCYPSPSAEDGAMNQDSLGNYRDLSKLVDPKMKLS 951
Query: 917 ----DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951
+EI+ VLDVALLCT S P +RP+M + ++LL K
Sbjct: 952 TREYEEIEKVLDVALLCTSSFPINRPTMRKVVELLKEKK 990
|
Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 955 | ||||||
| 224088234 | 955 | predicted protein [Populus trichocarpa] | 0.993 | 0.993 | 0.724 | 0.0 | |
| 224144009 | 953 | predicted protein [Populus trichocarpa] | 0.995 | 0.997 | 0.726 | 0.0 | |
| 255565085 | 958 | Receptor protein kinase CLAVATA1 precurs | 0.998 | 0.995 | 0.722 | 0.0 | |
| 359484751 | 972 | PREDICTED: leucine-rich repeat receptor- | 0.994 | 0.977 | 0.711 | 0.0 | |
| 356556623 | 960 | PREDICTED: leucine-rich repeat receptor- | 0.988 | 0.983 | 0.679 | 0.0 | |
| 449443009 | 959 | PREDICTED: leucine-rich repeat receptor- | 0.993 | 0.989 | 0.658 | 0.0 | |
| 356533009 | 960 | PREDICTED: leucine-rich repeat receptor- | 0.989 | 0.984 | 0.669 | 0.0 | |
| 297795941 | 894 | predicted protein [Arabidopsis lyrata su | 0.905 | 0.967 | 0.587 | 0.0 | |
| 15242059 | 895 | putative leucine-rich repeat transmembra | 0.915 | 0.976 | 0.568 | 0.0 | |
| 357448387 | 923 | Receptor-like kinase [Medicago truncatul | 0.906 | 0.938 | 0.543 | 0.0 |
| >gi|224088234|ref|XP_002308383.1| predicted protein [Populus trichocarpa] gi|222854359|gb|EEE91906.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1415 bits (3662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 690/953 (72%), Positives = 797/953 (83%), Gaps = 4/953 (0%)
Query: 1 MEIFHCLYLNLFIWLVFVPAVS-ANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGK 59
MEIFHCLY + + F+ AV A +PYSEALLSLKSEL+DD NSL DW VPPG +
Sbjct: 1 MEIFHCLYFRILLTFTFIVAVVVATNPYSEALLSLKSELIDDSNSLDDWSVPPGGQTGER 60
Query: 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV 119
+ ACSWSGV+CN N+T+V+ ++LSMK L G L GK +F ELVDLN S+NSFSGQ PV
Sbjct: 61 VQACSWSGVRCNNNSTVVIALDLSMKNLGGELSGKQFSVF-TELVDLNFSYNSFSGQLPV 119
Query: 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179
IFNLT+L LDISRNNFSG FP GI LRNL+VLDAFSNSFSG +P E+SQL++LK+LN
Sbjct: 120 GIFNLTNLKILDISRNNFSGQFPEGISGLRNLVVLDAFSNSFSGPLPVEVSQLDYLKILN 179
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPW 239
LAGSYF GPIPS++GSFKSLEF+HLAGN L IP ELG LKTVTHMEIGYN Y+G++PW
Sbjct: 180 LAGSYFDGPIPSKYGSFKSLEFIHLAGNFLGGTIPPELGQLKTVTHMEIGYNSYEGSVPW 239
Query: 240 QLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299
QL NMSE+QYLDIA ANLSG IPK+LSNLTKLESLFLFRNQL G VPWEF ++ L SLD
Sbjct: 240 QLSNMSELQYLDIASANLSGPIPKQLSNLTKLESLFLFRNQLTGSVPWEFGKIVPLASLD 299
Query: 300 LSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE 359
LSDN LSGPIPESFA+LKNL+LLSLMYNEM+GTVP+ + QLPSLE IWNN+FSGSLP
Sbjct: 300 LSDNHLSGPIPESFAELKNLKLLSLMYNEMNGTVPQGIGQLPSLETFLIWNNFFSGSLPR 359
Query: 360 NLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419
+LGRN KL+WVDVSTNNF GSIPPDIC+GG L KLILFSNNFTG LSPS+SNCSSLVRLR
Sbjct: 360 DLGRNLKLKWVDVSTNNFIGSIPPDICAGG-LVKLILFSNNFTGKLSPSISNCSSLVRLR 418
Query: 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIP 479
+EDNSFSGEIPLKFSQLPDI Y+DLS N F+GGIPTDI+QAS L YFN+SNNP LGGMIP
Sbjct: 419 IEDNSFSGEIPLKFSQLPDITYVDLSGNEFSGGIPTDISQASNLRYFNISNNPGLGGMIP 478
Query: 480 AQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERID 539
A+TWS P LQNFSASACNI+GNLPPF SCKS+SVIE H NNL+G++P SVS+C L ++D
Sbjct: 479 AKTWSSPLLQNFSASACNISGNLPPFHSCKSVSVIELHTNNLAGSVPGSVSDCQALRKMD 538
Query: 540 LANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPS 599
LA NK G IPE LA LP L VLDLSHN+ SG IPAKFG+ SSL +LNVSFNDISGSIPS
Sbjct: 539 LAFNKFTGHIPEDLASLPGLSVLDLSHNNFSGPIPAKFGASSSLVLLNVSFNDISGSIPS 598
Query: 600 GKVLRLMGSSAYAGNPKLCGAPLQPCHASVAIL-GKGTGKLKFVLLLCAGIVMFIAAALL 658
V RLMGS+AY GNPKLCGAPL+PC AS+AI GKGT KL +VLLLCAG+V+ I A++L
Sbjct: 599 NNVFRLMGSNAYEGNPKLCGAPLKPCSASIAIFGGKGTRKLTWVLLLCAGLVVLIVASIL 658
Query: 659 GIFFFRRGGKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVLPTGITV 718
GIF+ RRG KG WKM+SF GLP+FTANDVLRSF+STE EA +S++ CKAVLPTGITV
Sbjct: 659 GIFYIRRGSKGQWKMVSFSGLPRFTANDVLRSFSSTESMEAVPAESSSVCKAVLPTGITV 718
Query: 719 SVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIR 778
SVKKIE R+K +EF+TR+G RHKNLIRLLGFCYN+ AY+L+DY PNGNL+EKI
Sbjct: 719 SVKKIELETKRMKKATEFMTRLGVARHKNLIRLLGFCYNKQLAYVLHDYQPNGNLAEKIS 778
Query: 779 TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838
KRDW AKYK+V+G+ARGLCFLHHDCYPAIPHGDLK SNI+FDENMEPHLAEFGFKYL +
Sbjct: 779 LKRDWMAKYKLVIGIARGLCFLHHDCYPAIPHGDLKLSNILFDENMEPHLAEFGFKYLVE 838
Query: 839 LADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG 898
+ GS PA I+ E+GE +A+KEE+ MD Y FGEI+LEILTNGRL NAG S+Q+KP +
Sbjct: 839 MTKGSSPATISMRETGELNSAIKEELCMDTYKFGEIVLEILTNGRLANAGGSIQSKPKEV 898
Query: 899 LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951
LL E+Y+ N+ GS+ ++Q+EIKLV +VALLC RS PSDRPSME+ALKLLSG+K
Sbjct: 899 LLREIYSANQTGSADAMQEEIKLVFEVALLCMRSRPSDRPSMEDALKLLSGVK 951
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224144009|ref|XP_002325155.1| predicted protein [Populus trichocarpa] gi|222866589|gb|EEF03720.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1403 bits (3631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 695/957 (72%), Positives = 806/957 (84%), Gaps = 6/957 (0%)
Query: 1 MEIFHCLYLNLFIWLVFVPAVS-ANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGK 59
MEIFHC+Y + + L + AV A+DPYSEALLSLKSEL+DD +SL DW VPPG N K
Sbjct: 1 MEIFHCMYFGVLLALTCIVAVVLADDPYSEALLSLKSELIDDDSSLDDWLVPPGGNTEEK 60
Query: 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV 119
I ACSWSGVKC+KN+T+VV ++LSMK L G L GK +F ELVDLNLS+NSFSGQ PV
Sbjct: 61 IQACSWSGVKCDKNSTVVVALDLSMKNLGGELTGKQFGVF-AELVDLNLSYNSFSGQLPV 119
Query: 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179
IFNLT+L S DISRNNFSG FPGGI SLRNL+VLDAFSNSFSG +P E+SQLE+LKV N
Sbjct: 120 GIFNLTNLKSFDISRNNFSGQFPGGISSLRNLVVLDAFSNSFSGPLPVEVSQLEYLKVFN 179
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPW 239
LAGSYF GPIPS++GSFKSLEF+HLAGN L+ IP ELG LKTVTHMEIGYN Y+G+IPW
Sbjct: 180 LAGSYFDGPIPSEYGSFKSLEFIHLAGNSLSGNIPPELGQLKTVTHMEIGYNSYEGSIPW 239
Query: 240 QLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299
Q+GNMSE+QYLDIAGANLSG IPK+LSNLTKLESLFLFRNQL G VPWEF ++ L SLD
Sbjct: 240 QMGNMSELQYLDIAGANLSGPIPKQLSNLTKLESLFLFRNQLTGLVPWEFRQIVPLASLD 299
Query: 300 LSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE 359
LSDN+LSGPIPESFA+LKNL+LLSLMYNEM+GTVP + QLPSLE L IWNN+FSGSLP
Sbjct: 300 LSDNQLSGPIPESFAELKNLKLLSLMYNEMNGTVPPGIGQLPSLETLLIWNNFFSGSLPN 359
Query: 360 NLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419
+LG+N KL+WVDVSTNNF GSIPPDIC+GG L KLILFSNNFTGSL+PS+SNCSSLVRLR
Sbjct: 360 DLGKNLKLKWVDVSTNNFIGSIPPDICAGG-LVKLILFSNNFTGSLTPSISNCSSLVRLR 418
Query: 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIP 479
+EDNSFSGEIPLKFS LPDI Y+DLSRN FTGGIPTDI+QAS+L+YFN+SNNP LGGMIP
Sbjct: 419 IEDNSFSGEIPLKFSHLPDITYVDLSRNKFTGGIPTDISQASRLQYFNISNNPGLGGMIP 478
Query: 480 AQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERID 539
A+TWSL LQNFSASACNI+GNLPPF SCKS+SVIE MNNLSG++P VSNC L ++D
Sbjct: 479 AKTWSLQLLQNFSASACNISGNLPPFHSCKSVSVIELRMNNLSGSVPGDVSNCQALGKMD 538
Query: 540 LANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPS 599
LA+NK G IPE LA LP L VLDLSH++ SG IPAKFG+ SSL +LNVSFNDISGSIPS
Sbjct: 539 LADNKFTGHIPEDLASLPALSVLDLSHDNFSGPIPAKFGASSSLVLLNVSFNDISGSIPS 598
Query: 600 GKVLRLMGSSAYAGNPKLCGAPLQPCHASVAILG-KGTGKLKFVLLLCAGIVMFIAAALL 658
V +LMG+SAY GNPKLCGAPL+PC AS+ I G KGT K ++LLLCAG+V+ I A+
Sbjct: 599 SNVFKLMGTSAYQGNPKLCGAPLEPCSASITIFGSKGTRKHTWILLLCAGVVVLIVASAF 658
Query: 659 GIFFFRRGGKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVLPTGITV 718
G+F+ RRG KGHWKM+SF GLP+FTA+DVLRSF+STE EA P+S + CKAVLPTGITV
Sbjct: 659 GVFYIRRGSKGHWKMVSFSGLPRFTASDVLRSFSSTESMEAVPPESNSVCKAVLPTGITV 718
Query: 719 SVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIR 778
SVKKIE A +K +EF+TR+G RHKNLIRLLGFCYN+ AY+LYDY PNGNL+EKI
Sbjct: 719 SVKKIELEAKTMKKATEFMTRLGVARHKNLIRLLGFCYNKQLAYVLYDYQPNGNLAEKIT 778
Query: 779 TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838
KRDW AKYK+V+G+ARGLCFLHHDCYPAIPHGDLK SNI+FDENMEPHLA+FGFKYL +
Sbjct: 779 LKRDWVAKYKLVIGIARGLCFLHHDCYPAIPHGDLKLSNILFDENMEPHLADFGFKYLVE 838
Query: 839 LADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG 898
+ GS PA I E+GE +++KEE+YMD+Y FGEIIL+ILTN L NAG ++ +KP +
Sbjct: 839 MTKGSSPATIFMGETGELNSSIKEELYMDIYRFGEIILQILTN--LANAGGTIHSKPKEV 896
Query: 899 LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPHGK 955
LL E+Y+EN+ GS+ S Q+EIKLVL+VALLC +S PSDRPSME+ALKLLSG+K K
Sbjct: 897 LLREIYSENQTGSTDSTQEEIKLVLEVALLCIKSRPSDRPSMEDALKLLSGMKSQRK 953
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255565085|ref|XP_002523535.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis] gi|223537242|gb|EEF38874.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1397 bits (3617), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/959 (72%), Positives = 806/959 (84%), Gaps = 5/959 (0%)
Query: 1 MEIFHCLYLNLFIWLVFVPAV-SANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGK 59
MEIF LYLN+F+ L+F AV SA DPYSEALLSLKSEL+DD NSL DW +P NP+ K
Sbjct: 1 MEIFRFLYLNIFLILIFTAAVVSATDPYSEALLSLKSELMDDDNSLADWLLPSVGNPSKK 60
Query: 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV 119
I+ACSWSGVKCNKN+T+V+ +++S K L GA PGK +F ELVDLNLS+NSFSG+ PV
Sbjct: 61 IHACSWSGVKCNKNSTVVIALDISFKNLGGAFPGKHFSVF-TELVDLNLSYNSFSGRLPV 119
Query: 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179
EIFNLT+L SLD SRNNFSG FP GI SL+NL+VLDAFSNSFSG +P EISQLE++K++N
Sbjct: 120 EIFNLTNLRSLDFSRNNFSGQFPSGISSLQNLVVLDAFSNSFSGLLPVEISQLEYIKIVN 179
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPW 239
LAGSYF GPIP ++GSF+SLEF+HLAGNLL+ IP ELG LKTVTHMEIGYN YQG+IPW
Sbjct: 180 LAGSYFDGPIPPEYGSFRSLEFIHLAGNLLSGNIPPELGRLKTVTHMEIGYNSYQGSIPW 239
Query: 240 QLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299
QLGNMSE+QYLDIAGA+L+GSIPKELSNLTKL SLFLFRN L G VPWEF R+ L SLD
Sbjct: 240 QLGNMSEIQYLDIAGASLTGSIPKELSNLTKLRSLFLFRNHLTGLVPWEFGRIEPLSSLD 299
Query: 300 LSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE 359
LSDN+LSGPIPESF++LKNL+LLSLMYNEM+GTVP+ + QLPSL+ L IWNN+FSGSLPE
Sbjct: 300 LSDNQLSGPIPESFSELKNLKLLSLMYNEMNGTVPQGIAQLPSLDTLLIWNNFFSGSLPE 359
Query: 360 NLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419
+LGRNSKL+WVDVSTNNF GSIPPDIC+GGVLFKLILFSNNFTGSLSPS+S CSSLVRLR
Sbjct: 360 DLGRNSKLKWVDVSTNNFVGSIPPDICAGGVLFKLILFSNNFTGSLSPSISKCSSLVRLR 419
Query: 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIP 479
+EDNSF GEIPLKF+ LPDI Y+DLSRN FTGGIP DI QA +L+YFN+SNNP+LGG IP
Sbjct: 420 IEDNSFWGEIPLKFNNLPDITYVDLSRNKFTGGIPIDIFQAPQLQYFNISNNPELGGTIP 479
Query: 480 AQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERID 539
+TWS P LQNFSAS CNI+GN+PPF SCKS+SVIE MNNL G +P S+S C LE++D
Sbjct: 480 TKTWSSPLLQNFSASGCNISGNVPPFHSCKSVSVIELDMNNLEGNVPVSISKCHNLEKMD 539
Query: 540 LANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPS 599
LA+NK G IPE LA LP L +DLSHN+ SG IPAKFG S L +LNVSFNDISGSIP
Sbjct: 540 LASNKFSGHIPEELASLPALSFIDLSHNNFSGHIPAKFGDPSRLKLLNVSFNDISGSIPP 599
Query: 600 GKVLRLMGSSAYAGNPKLCGAPLQPCHASVAILG-KGTGKLKFVLLLCAGIVMFIAAALL 658
K+ RL+GSSA++GN KLCGAPL+PCHAS+AILG KGT KL +VLLL AG+V+FI A+
Sbjct: 600 KKLFRLIGSSAFSGNSKLCGAPLRPCHASMAILGSKGTRKLTWVLLLSAGVVLFIVASAW 659
Query: 659 GIFFFRRGGKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVLPTGITV 718
GIF+ RRG KG WKM+SF GLP+FTANDVLRSF+ TE EAA P SA+ CKAVLPTGITV
Sbjct: 660 GIFYIRRGSKGQWKMVSFNGLPRFTANDVLRSFSFTESMEAAPPLSASVCKAVLPTGITV 719
Query: 719 SVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIR 778
SVKKIE+ A R+ +V+EF+ R+G RHKNLIRLLG CYN+ AYLLYDYLPNGNL+EKI
Sbjct: 720 SVKKIEFEAKRMMMVTEFVMRMGNARHKNLIRLLGLCYNKQLAYLLYDYLPNGNLAEKIN 779
Query: 779 TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838
KRDW AKYK+V G+ARGLCFLHHDCYPAIPHGDL++SNIVFDENMEPHLAEFG K+L +
Sbjct: 780 VKRDWPAKYKLVTGIARGLCFLHHDCYPAIPHGDLRSSNIVFDENMEPHLAEFGIKFLAE 839
Query: 839 LADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID 897
+ GS A I+ E+GE N+ +KEE+YMD+Y FGEIILEILTNGR+ NAG S+Q+KP +
Sbjct: 840 MIKGSSLATISMKETGEILNSRIKEELYMDIYSFGEIILEILTNGRMANAGGSIQSKPKE 899
Query: 898 GLLGEMYN-ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPHGK 955
LL E+YN SS S+Q+EIK VL+VALLCTRS P+DRP ME+ALKLLSG +P K
Sbjct: 900 VLLREIYNENEASSSSESMQEEIKQVLEVALLCTRSRPADRPPMEDALKLLSGFRPQRK 958
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484751|ref|XP_002264530.2| PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1391 bits (3600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/957 (71%), Positives = 804/957 (84%), Gaps = 7/957 (0%)
Query: 1 MEIFHCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKI 60
MEIF +++ L+ + AV A D +S+ALLSLKSE VDD NSL DWFVPPGV K+
Sbjct: 1 MEIFRSFCVSVLGALLVIEAVLAADLFSDALLSLKSEFVDDSNSLADWFVPPGVEEYDKV 60
Query: 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVE 120
YACSW V CNKN+++V+G++LS K L G + GK +F ELVDLNLS+NSFS Q PVE
Sbjct: 61 YACSWFEVTCNKNSSLVIGLDLSSKNLGGIISGKQFSVF-TELVDLNLSYNSFSEQLPVE 119
Query: 121 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180
IFNLT+L SLDISRNNFSGHFPGG+ L +L+VLDAFSNSFSG +P E+SQLE+LKVLNL
Sbjct: 120 IFNLTNLRSLDISRNNFSGHFPGGVSRLEHLVVLDAFSNSFSGPLPTEVSQLEYLKVLNL 179
Query: 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQ 240
AGSYF GPIPS++GSFKSLEF+HLAGNLL+ IP ELG L TVTHMEIGYN YQG+IPWQ
Sbjct: 180 AGSYFKGPIPSEYGSFKSLEFIHLAGNLLSGSIPPELGKLSTVTHMEIGYNSYQGSIPWQ 239
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
LGNM+E+QYLDIAGA+LSGSIPK+LSNLTKL+SLFLFRNQL G +P EFSR+ TL LDL
Sbjct: 240 LGNMTEIQYLDIAGADLSGSIPKQLSNLTKLQSLFLFRNQLTGLIPSEFSRIVTLTDLDL 299
Query: 301 SDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN 360
SDN+LSG IPESF++LKNLRLLSLMYN+MSGTVPES+ +LP L+ L IWNN+FSGSLP++
Sbjct: 300 SDNQLSGSIPESFSELKNLRLLSLMYNDMSGTVPESIAELPLLDTLLIWNNFFSGSLPQS 359
Query: 361 LGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRL 420
LG NSKL+WVDVSTNNFNG IPP+IC+GGVLFKLILFSNNFTG LSPSLSNCSSLVRLRL
Sbjct: 360 LGTNSKLKWVDVSTNNFNGPIPPEICTGGVLFKLILFSNNFTGGLSPSLSNCSSLVRLRL 419
Query: 421 EDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPA 480
E+NSFSGEIPL+FS LP+I Y+DLS NGFTGGIPTDI+QAS L+YFNVS N +LGGM+PA
Sbjct: 420 ENNSFSGEIPLRFSHLPEITYVDLSGNGFTGGIPTDISQASNLQYFNVSKNSELGGMLPA 479
Query: 481 QTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDL 540
+ WSLP LQNFSAS+C I+G++P F+ CK+I+VIE MNNLSG IPES+S+C LE ++L
Sbjct: 480 KIWSLPLLQNFSASSCKISGHIPAFQVCKNITVIEVSMNNLSGIIPESISSCQALEMVNL 539
Query: 541 ANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG 600
ANN G IPE LA L L V+DLSHN+L+G IP K + SSL ++NVSFNDISGSIPS
Sbjct: 540 ANNNFTGHIPEQLASLHELAVVDLSHNNLTGPIPEKLSNLSSLLLINVSFNDISGSIPSE 599
Query: 601 KVLRLMGSSAYAGNPKLCGAPLQPCHASVAI-----LG-KGTGKLKFVLLLCAGIVMFIA 654
K+ R+MGSSA+ GN KLCG PL+PC S I LG K KLK+VLLLCAG+++FI
Sbjct: 600 KIFRVMGSSAFVGNSKLCGEPLKPCADSEGIQHGFKLGSKSKDKLKWVLLLCAGVLLFIL 659
Query: 655 AALLGIFFFRRGGKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVLPT 714
++LGIF+FRRG KG W+M+SF GLP+FTANDVLRSF+STE E P S++ CKAVLPT
Sbjct: 660 VSVLGIFYFRRGSKGRWEMVSFSGLPRFTANDVLRSFSSTESMETTPPLSSSVCKAVLPT 719
Query: 715 GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774
GITVSVKKIEW A R+K++SEFITRIG RHKNLIRLLGFCYN+H AYLLYDYLPNGNL+
Sbjct: 720 GITVSVKKIEWEAKRMKVMSEFITRIGNARHKNLIRLLGFCYNKHVAYLLYDYLPNGNLA 779
Query: 775 EKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834
EKIR KRDW AKYKIV+G+ARGL +LHH+CYPAIPHGDLK+S+I+FDENMEPHLAEFGFK
Sbjct: 780 EKIRMKRDWTAKYKIVIGIARGLHYLHHECYPAIPHGDLKSSDILFDENMEPHLAEFGFK 839
Query: 835 YLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK 894
L +L S P+ I+ TE+GEF A+KEE+Y D+Y FGE+I+E +TNGRLTNAG S+Q+K
Sbjct: 840 LLAELNKASLPSTISRTETGEFNPAIKEELYTDIYSFGEVIMETITNGRLTNAGGSIQSK 899
Query: 895 PIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951
P + LL E+YNENEVGS+ S+Q+EIKLV +VALLCTRS PSDRPSME+ L LLSGLK
Sbjct: 900 PREALLREIYNENEVGSADSMQEEIKLVFEVALLCTRSRPSDRPSMEDVLNLLSGLK 956
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356556623|ref|XP_003546623.1| PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1267 bits (3279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/955 (67%), Positives = 758/955 (79%), Gaps = 11/955 (1%)
Query: 1 MEIFHCLYLNLFIWLVFV---PAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPA 57
MEIF C Y+ I + F AV A DPYSEALLSLKSELVDD NSLH+W VP G
Sbjct: 1 MEIFKCFYIKNLILVTFFMVSSAVLAIDPYSEALLSLKSELVDDDNSLHNWVVPSGGKLT 60
Query: 58 GKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQF 117
GK YACSWSG+KCN ++TIV I+LSMK L G + GK IF N L LNLSHN FSGQ
Sbjct: 61 GKSYACSWSGIKCNNDSTIVTSIDLSMKKLGGVVSGKQFIIFTN-LTSLNLSHNFFSGQL 119
Query: 118 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177
P EIFNLTSL SLDISRNNFSG FPGGI L+NL+VLDAFSNSFSG +PAE SQLE+LKV
Sbjct: 120 PAEIFNLTSLTSLDISRNNFSGPFPGGIPRLQNLVVLDAFSNSFSGPLPAEFSQLENLKV 179
Query: 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI 237
LNLAGSYF G IP ++GSFKSLEFLHLAGN L IP ELG LKTVTHMEIGYN YQG I
Sbjct: 180 LNLAGSYFRGSIPPEYGSFKSLEFLHLAGNSLTGSIPPELGHLKTVTHMEIGYNEYQGFI 239
Query: 238 PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKS 297
P +LGNMS++QYLDIAGANLSG IPK+LSNLT L+S+FLFRNQL G +P E S + L
Sbjct: 240 PPELGNMSQLQYLDIAGANLSGPIPKQLSNLTSLQSIFLFRNQLTGSIPSELSIIEPLTD 299
Query: 298 LDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL 357
LDLSDN L G IPESF++L+NLRLLS+MYN+MSGTVPES+ +LPSLE L IWNN FSGSL
Sbjct: 300 LDLSDNFLIGSIPESFSELENLRLLSVMYNDMSGTVPESIAKLPSLETLLIWNNRFSGSL 359
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVR 417
P +LGRNSKL+WVD STN+ GSIPPDIC+ G LFKLILFSN FTG LS S+SNCSSLVR
Sbjct: 360 PPSLGRNSKLKWVDASTNDLVGSIPPDICASGELFKLILFSNKFTGGLS-SISNCSSLVR 418
Query: 418 LRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGM 477
LRLEDNSFSGEI LKFS LPDI Y+DLS+N F GGIP+DI+QA++LEYFNVS NP+LGG+
Sbjct: 419 LRLEDNSFSGEITLKFSHLPDILYVDLSKNNFVGGIPSDISQATQLEYFNVSYNPQLGGI 478
Query: 478 IPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELER 537
IP+QTWSLP LQNFSAS+C I+ +LP F+SCKSISVI+ N+LSGTIP VS C LE+
Sbjct: 479 IPSQTWSLPQLQNFSASSCGISSDLPLFESCKSISVIDLDSNSLSGTIPNGVSKCQALEK 538
Query: 538 IDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSI 597
I+L+NN L G IP+ LA +PVLGV+DLS+N +G IPAKFGS S+L +LNVSFN+ISGSI
Sbjct: 539 INLSNNNLTGHIPDELASIPVLGVVDLSNNKFNGPIPAKFGSSSNLQLLNVSFNNISGSI 598
Query: 598 PSGKVLRLMGSSAYAGNPKLCGAPLQPCHASVAILG-KGTGKLKFVLLLCAGIVMFIAAA 656
P+ K +LMG SA+ GN +LCGAPLQPC SV ILG KGT K+ ++LL G+++ +
Sbjct: 599 PTAKSFKLMGRSAFVGNSELCGAPLQPCPDSVGILGSKGTWKVTRIVLLSVGLLIVLLGL 658
Query: 657 LLGIFFFRRGGKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVLPTGI 716
+ GI + RRG K WKM SF GLPQFTAND+L S ++T + QS + K VLPTGI
Sbjct: 659 VFGILYLRRGIKSQWKMASFAGLPQFTANDILTSLSAT--TKPTDIQSPSVTKTVLPTGI 716
Query: 717 TVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEK 776
TV VKKIE A IK+VSEFI R+G RHKNLIRLLGFC+N+H YLLYDYLPNGNL+EK
Sbjct: 717 TVLVKKIELEARSIKVVSEFIMRLGNARHKNLIRLLGFCHNQHLVYLLYDYLPNGNLAEK 776
Query: 777 IRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836
+ K DWAAK++ V+G+ARGLCFLHH+CYPAIPHGDL+ SNIVFDENMEPHLAEFGFK++
Sbjct: 777 MEMKWDWAAKFRTVVGIARGLCFLHHECYPAIPHGDLRPSNIVFDENMEPHLAEFGFKHV 836
Query: 837 TQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 896
++ + GS P W E+ A KEE+ MD+Y FGE+ILEILT RL N+G+S+ +KP
Sbjct: 837 SRWSKGSSPTTTKWET--EYNEATKEELSMDIYKFGEMILEILTRERLANSGASIHSKPW 894
Query: 897 DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951
+ LL E+YNEN S+SSLQ EIKLVL+VA+LCTRS SDRPSME+ LKLLSGLK
Sbjct: 895 EVLLREIYNENGASSASSLQ-EIKLVLEVAMLCTRSRSSDRPSMEDVLKLLSGLK 948
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449443009|ref|XP_004139273.1| PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Cucumis sativus] gi|449493663|ref|XP_004159400.1| PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1266 bits (3277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/951 (65%), Positives = 755/951 (79%), Gaps = 2/951 (0%)
Query: 6 CLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSW 65
CL L ++L+F A ++ D YSEALLSLKSE +DDF SL DW V NP GKI+ CSW
Sbjct: 6 CLCFYLLVFLLFCVAAASTDRYSEALLSLKSEFLDDFGSLSDWIVDSRENPFGKIHGCSW 65
Query: 66 SGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLT 125
SG+KC+KN+TIV+GI+LSMK L G + G+ +F ELVDLNLSHN SG+ PV IFNLT
Sbjct: 66 SGIKCDKNSTIVIGIDLSMKRLGGGISGEQFHVF-KELVDLNLSHNYISGKLPVGIFNLT 124
Query: 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185
+L SLDISRNNFSGHFP GI SL+NL+VLDAFSNSF+GS+P ++SQLE+LK LN AGSYF
Sbjct: 125 NLRSLDISRNNFSGHFPLGISSLQNLVVLDAFSNSFAGSLPVDLSQLENLKFLNFAGSYF 184
Query: 186 SGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMS 245
GPIPS++GSFK LEF+HLAGN L+ +P ELG LKTVTHMEIGYN +QGN+PW+ GNMS
Sbjct: 185 KGPIPSEYGSFKKLEFIHLAGNFLSGNLPPELGKLKTVTHMEIGYNNFQGNLPWEFGNMS 244
Query: 246 EVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL 305
+QYLDIA ANLSGSIPKE NLTKLESLFLFRNQL+G +P E S++ +L +LDLSDN +
Sbjct: 245 NLQYLDIASANLSGSIPKEFGNLTKLESLFLFRNQLSGFLPDELSKIISLVNLDLSDNHI 304
Query: 306 SGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS 365
SGPIPESF++LKNLRLLS+MYNEMSG+VP+ + +LPSLE L IW+N FSGSLP NLG N
Sbjct: 305 SGPIPESFSELKNLRLLSVMYNEMSGSVPKGIGELPSLETLLIWSNQFSGSLPNNLGSNK 364
Query: 366 KLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSF 425
KL+WVDVSTNNF G IPPDIC GG+LFKLILFSN F+G LSPSL+NCSSLVRLRLEDN F
Sbjct: 365 KLKWVDVSTNNFVGVIPPDICQGGLLFKLILFSNKFSGGLSPSLTNCSSLVRLRLEDNVF 424
Query: 426 SGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSL 485
SG+I L F+ L ++YIDLSRN F+GG+P DIN+AS L+Y N+S+NP+LGG+ P +TW
Sbjct: 425 SGDISLNFNDLAHVSYIDLSRNNFSGGVPLDINKASNLQYLNISHNPQLGGVFPVETWIS 484
Query: 486 PSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKL 545
P LQNFSAS C I GNLP F+ CKSIS IE + N LSG IPES++NC L R+DL+ N L
Sbjct: 485 PLLQNFSASGCGIRGNLPKFQVCKSISTIELNNNKLSGKIPESIANCQALVRMDLSYNNL 544
Query: 546 IGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRL 605
G IPE LA LP + +LDLSHN +G IP KF SSL +LNVS+NDISGSIP +V R
Sbjct: 545 SGHIPEELAHLPSINILDLSHNDFNGTIPDKFKDSSSLLLLNVSYNDISGSIPEKEVFRS 604
Query: 606 MGSSAYAGNPKLCGAPLQPCHASVAIL-GKGTGKLKFVLLLCAGIVMFIAAALLGIFFFR 664
MG SA+ GN KLCGAPL+PC S+A++ GKG GK +L+LCAG+ + +LL IFF R
Sbjct: 605 MGRSAFTGNSKLCGAPLRPCSGSLAMIGGKGMGKFILILILCAGLAIITVISLLWIFFVR 664
Query: 665 RGGKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIE 724
RG KG WKM+SF GLP FTAND+LRSF+STE +EA P SA+ KAVLPTGITVS+KKI+
Sbjct: 665 RGSKGKWKMVSFTGLPPFTANDILRSFDSTESKEAILPLSASIFKAVLPTGITVSIKKID 724
Query: 725 WGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWA 784
W A R+K +SEFIT++G++RHKNL+RLLGFCYN+ YLLYDYLPNGNL+EKI TKR+W
Sbjct: 725 WEAKRMKTISEFITQLGSLRHKNLVRLLGFCYNKQMVYLLYDYLPNGNLAEKISTKREWP 784
Query: 785 AKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844
K K+++G+ARG+ FLHHDC PAIPHGDLK +NI+FDENMEP LAEFG ++L QL + +
Sbjct: 785 TKLKLIIGIARGVHFLHHDCSPAIPHGDLKPNNIIFDENMEPRLAEFGLRFLQQLNEDTL 844
Query: 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY 904
P F NA +EE++MDV+ FGEIILEI++NGRLT AGSS QNK D LL E+
Sbjct: 845 PLSSTTKGGDNFNNATEEELWMDVHSFGEIILEIISNGRLTTAGSSTQNKARDLLLREIC 904
Query: 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPHGK 955
EN S +S Q+EI+ VLD+ALLCTRS PS+RPSME+ LKLLS +KP K
Sbjct: 905 KENGTSSPNSSQEEIEQVLDLALLCTRSRPSNRPSMEDILKLLSDIKPEVK 955
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356533009|ref|XP_003535061.1| PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1248 bits (3230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/955 (66%), Positives = 753/955 (78%), Gaps = 10/955 (1%)
Query: 1 MEIF---HCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPA 57
ME+F H L L ++V ++ +DPYSEALLSLK+ELVDD NSL +W VP G
Sbjct: 1 MEVFKYSHIKNLLLATFMVSSAVLAIDDPYSEALLSLKAELVDDDNSLQNWVVPSGGKLT 60
Query: 58 GKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQF 117
GK YACSWSG+KCN +TIV I+LSMK L G + GK IF N L LNLSHN FSG
Sbjct: 61 GKSYACSWSGIKCNNGSTIVTSIDLSMKKLGGVVSGKQFSIFTN-LTSLNLSHNFFSGNL 119
Query: 118 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177
P +IFNLTSL SLDISRNNFSG FPGGI L+NL+VLDAFSNSFSGS+PAE SQL LKV
Sbjct: 120 PAKIFNLTSLTSLDISRNNFSGPFPGGIPRLQNLIVLDAFSNSFSGSLPAEFSQLASLKV 179
Query: 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI 237
LNLAGSYF G IPS++GSFKSLEFLHLAGN L+ IP ELG L TVTHMEIGYN YQG I
Sbjct: 180 LNLAGSYFRGSIPSEYGSFKSLEFLHLAGNSLSGSIPPELGHLNTVTHMEIGYNLYQGFI 239
Query: 238 PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKS 297
P ++GNMS++QYLDIAGANLSG IPK+LSNL+ L+SLFLF NQL G +P E S + L
Sbjct: 240 PPEIGNMSQLQYLDIAGANLSGLIPKQLSNLSNLQSLFLFSNQLTGSIPSELSNIEPLTD 299
Query: 298 LDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL 357
LDLSDN +G IPESF+DL+NLRLLS+MYN+MSGTVPE + QLPSLE L IWNN FSGSL
Sbjct: 300 LDLSDNFFTGSIPESFSDLENLRLLSVMYNDMSGTVPEGIAQLPSLETLLIWNNKFSGSL 359
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVR 417
P +LGRNSKL+WVD STN+ G+IPPDIC G LFKLILFSN FTG LS S+SNCSSLVR
Sbjct: 360 PRSLGRNSKLKWVDASTNDLVGNIPPDICVSGELFKLILFSNKFTGGLS-SISNCSSLVR 418
Query: 418 LRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGM 477
LRLEDN FSGEI LKFS LPDI Y+DLSRN F GGIP+DI+QA++LEYFNVS N +LGG+
Sbjct: 419 LRLEDNLFSGEITLKFSLLPDILYVDLSRNNFVGGIPSDISQATQLEYFNVSYNQQLGGI 478
Query: 478 IPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELER 537
IP+QTWSLP LQNFSAS+C I+ +LPPF+SCKSISV++ NNLSGTIP SVS C LE+
Sbjct: 479 IPSQTWSLPQLQNFSASSCGISSDLPPFESCKSISVVDLDSNNLSGTIPNSVSKCQTLEK 538
Query: 538 IDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSI 597
I+L+NN L G IP+ LA +PVLGV+DLS+N+ +G IPAKFGSCS+L +LNVSFN+ISGSI
Sbjct: 539 INLSNNNLTGHIPDELATIPVLGVVDLSNNNFNGTIPAKFGSCSNLQLLNVSFNNISGSI 598
Query: 598 PSGKVLRLMGSSAYAGNPKLCGAPLQPCHASVAILG-KGTGKLKFVLLLCAGIVMFIAAA 656
P+GK +LMG SA+ GN +LCGAPLQPC SV ILG K + K+ ++LL G+++ +
Sbjct: 599 PAGKSFKLMGRSAFVGNSELCGAPLQPCPDSVGILGSKCSWKVTRIVLLSVGLLIVLLGL 658
Query: 657 LLGIFFFRRGGKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVLPTGI 716
G+ + RRG K WKM+SF GLPQFTANDVL S ++T + QS + KAVLPTGI
Sbjct: 659 AFGMSYLRRGIKSQWKMVSFAGLPQFTANDVLTSLSAT--TKPTEVQSPSVTKAVLPTGI 716
Query: 717 TVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEK 776
TV VKKIEW K+ SEFI R+G RHKNL+RLLGFC+N H YLLYDYLPNGNL+EK
Sbjct: 717 TVLVKKIEWEERSSKVASEFIVRLGNARHKNLVRLLGFCHNPHLVYLLYDYLPNGNLAEK 776
Query: 777 IRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836
+ K DWAAK++ V+G+ARGLCFLHH+CYPAIPHGDLK SNIVFDENMEPHLAEFGFK +
Sbjct: 777 MEMKWDWAAKFRTVVGIARGLCFLHHECYPAIPHGDLKPSNIVFDENMEPHLAEFGFKQV 836
Query: 837 TQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 896
+ + GS P + W E+G KEE+ MD+Y FGE+ILEI+T GRLTNAG+S+ +KP
Sbjct: 837 LRWSKGSSPTRNKW-ETGMTNKFTKEELCMDIYKFGEMILEIVTGGRLTNAGASIHSKPW 895
Query: 897 DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951
+ LL E+YNENE S+SSL EIKLVL+VA+LCT+S SDRPSME+ LKLLSGLK
Sbjct: 896 EVLLREIYNENEGTSASSLH-EIKLVLEVAMLCTQSRSSDRPSMEDVLKLLSGLK 949
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297795941|ref|XP_002865855.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297311690|gb|EFH42114.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1050 bits (2714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/954 (58%), Positives = 696/954 (72%), Gaps = 89/954 (9%)
Query: 6 CLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFV-PPGVNPAGKIYAC- 63
C YL LF+ LV A DP +E+LL+LKS+L D+ NSL DWF+ PGV + K+ AC
Sbjct: 12 CFYLCLFLTLV------AADPQTESLLTLKSQLTDNSNSLKDWFIITPGV--SDKVVACC 63
Query: 64 SWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF- 122
SWSGV+CN+N+T VV ++LS K L+G+L GK + + F EL++LN+S NSFSG+FP EIF
Sbjct: 64 SWSGVRCNQNSTSVVSLDLSSKNLAGSLSGK-VFLVFTELLELNISDNSFSGEFPTEIFF 122
Query: 123 NLTSLISLDISRNNFSGHFP----GGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178
NLT+L SLDISRNNFSG FP GG SL+NL++LDA SNSFSG +P +SQLE+LKVL
Sbjct: 123 NLTNLRSLDISRNNFSGRFPDGNGGGGSSLKNLILLDALSNSFSGPLPIHLSQLENLKVL 182
Query: 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238
NLAGSYF+G IPSQ+GSFK+LEFLHL GNLL+ IP ELG L T+THMEIGYN Y+G IP
Sbjct: 183 NLAGSYFTGSIPSQYGSFKNLEFLHLGGNLLSGHIPQELGNLTTLTHMEIGYNSYEGVIP 242
Query: 239 WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSL 298
WQ+G MSE++YLDIAGANLSG +PK SNLTKLESLFLFRN L+ ++PWE ++T+L +L
Sbjct: 243 WQIGYMSELKYLDIAGANLSGFLPKHFSNLTKLESLFLFRNHLSREIPWELGQITSLVNL 302
Query: 299 DLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLP 358
DLSDN +SG IPESF+ LKNLRLL+LMYNEMSGT+P+ + QLPSL+ LFIWNNYFSGSLP
Sbjct: 303 DLSDNHISGTIPESFSGLKNLRLLNLMYNEMSGTLPQVIAQLPSLDTLFIWNNYFSGSLP 362
Query: 359 ENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRL 418
++LG NSKLRWVDVSTN+F G IP ICSGGVLFK+ILFSNNFTG+LSPSLSNCS+LVR+
Sbjct: 363 KSLGMNSKLRWVDVSTNSFEGEIPQGICSGGVLFKVILFSNNFTGTLSPSLSNCSTLVRI 422
Query: 419 RLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMI 478
RLEDNSFSG IP FS++PDI+YIDLSRN TGGIP DI++A+KL+YFN+SNNP+LGG +
Sbjct: 423 RLEDNSFSGVIPFSFSEIPDISYIDLSRNKLTGGIPLDISKATKLDYFNISNNPELGGKL 482
Query: 479 PAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERI 538
P Q WS P LQNFSAS+C+I+G+LP F+SCK+I+VIE NN+SG + +VS C LE++
Sbjct: 483 PPQIWSAPRLQNFSASSCSISGSLPEFESCKAITVIELSNNNISGMLTPTVSTCGSLEKM 542
Query: 539 DLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIP 598
DL SHN+LSG I P
Sbjct: 543 DL------------------------SHNNLSGSI------------------------P 554
Query: 599 SGKVLRLMGSSAYAGNPKLCGAPLQPCHASVAILGKGTGKLKFVLLLCAGIVMFIAAALL 658
S KV + MG AY GN LCG PL+ C A + KL VL+ C ++ + A L
Sbjct: 555 SDKVFQSMGKHAYEGNANLCGLPLKSCSA------YSSKKLVSVLVACLVSILLMVVAAL 608
Query: 659 GIFFFRRGGKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVLPTGITV 718
+++ R+ +G WKM+SF GLP FTA+DVLRSF S E EA P S + KAVLPTGITV
Sbjct: 609 ALYYIRQRSQGQWKMVSFAGLPHFTADDVLRSFGSPEPSEAV-PASVS--KAVLPTGITV 665
Query: 719 SVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD-YLPNGNLSEKI 777
V+KIE + +V F+T++G RH NL+RLLGFCYN H Y+LYD L G L+EK+
Sbjct: 666 IVRKIELQDKKKSVVLNFLTQMGNARHVNLVRLLGFCYNNHLVYVLYDNNLHTGTLAEKM 725
Query: 778 RT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKY 835
RT K+DWA K +I+ GVA+GLCFLHH+CYPAIPHGD+K+SNI+FD++ +EP+L EFGFKY
Sbjct: 726 RTKKKDWATKKRIITGVAKGLCFLHHECYPAIPHGDVKSSNILFDDDKIEPYLGEFGFKY 785
Query: 836 LTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGS-SLQNK 894
+ L + + + ++ E D+Y FGE+ILEILTNG+L NAG +QNK
Sbjct: 786 MLHL------------NTDQMNDVIRAEQQKDIYNFGELILEILTNGKLMNAGGLMIQNK 833
Query: 895 PIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948
P D LL E+Y ENEVGSS Q E+K V++VALLC RS SDRP ME+AL+LLS
Sbjct: 834 PKDVLLREVYTENEVGSSDFKQGEVKRVVEVALLCIRSDQSDRPCMEDALRLLS 887
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15242059|ref|NP_199948.1| putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] gi|9759281|dbj|BAB09746.1| receptor protein kinase-like [Arabidopsis thaliana] gi|224589717|gb|ACN59390.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gi|332008686|gb|AED96069.1| putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1038 bits (2685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/953 (56%), Positives = 680/953 (71%), Gaps = 79/953 (8%)
Query: 5 HCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACS 64
H + F +F+ V+A +P +E+LL+LKS+L D+FNSL DWF+ + CS
Sbjct: 6 HNKLCSFFYLCLFLTLVAAAEPQTESLLTLKSQLTDNFNSLKDWFINTPEVSDNLVACCS 65
Query: 65 WSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF-N 123
WSGV+CN+N+T VV ++LS K L+G+L GK +F EL++LN+S NSFSG+FP EIF N
Sbjct: 66 WSGVRCNQNSTSVVSVDLSSKNLAGSLSGKEFLVF-TELLELNISDNSFSGEFPAEIFFN 124
Query: 124 LTSLISLDISRNNFSGHFP---GGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180
+T+L SLDISRNNFSG FP GG SL+NL+ LDA SNSFSG +P +SQLE+LKVLNL
Sbjct: 125 MTNLRSLDISRNNFSGRFPDGNGGDSSLKNLIFLDALSNSFSGPLPIHLSQLENLKVLNL 184
Query: 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQ 240
AGSYF+G IPSQ+GSFK+LEFLHL GNLL+ IP ELG L T+THMEIGYN Y+G IPW+
Sbjct: 185 AGSYFTGSIPSQYGSFKNLEFLHLGGNLLSGHIPQELGNLTTLTHMEIGYNSYEGVIPWE 244
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
+G MSE++YLDIAGANLSG +PK SNLTKLESLFLFRN L+ ++PWE +T+L +LDL
Sbjct: 245 IGYMSELKYLDIAGANLSGFLPKHFSNLTKLESLFLFRNHLSREIPWELGEITSLVNLDL 304
Query: 301 SDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN 360
SDN +SG IPESF+ LKNLRLL+LM+NEMSGT+PE + QLPSL+ LFIWNNYFSGSLP++
Sbjct: 305 SDNHISGTIPESFSGLKNLRLLNLMFNEMSGTLPEVIAQLPSLDTLFIWNNYFSGSLPKS 364
Query: 361 LGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRL 420
LG NSKLRWVDVSTN+F G IP ICS GVLFKLILFSNNFTG+LSPSLSNCS+LVR+RL
Sbjct: 365 LGMNSKLRWVDVSTNSFQGEIPQGICSRGVLFKLILFSNNFTGTLSPSLSNCSTLVRIRL 424
Query: 421 EDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPA 480
EDNSFSG IP FS++PDI+YIDLSRN TGGIP DI++A+KL+YFN+SNNP+LGG +P
Sbjct: 425 EDNSFSGVIPFSFSEIPDISYIDLSRNKLTGGIPLDISKATKLDYFNISNNPELGGKLPP 484
Query: 481 QTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDL 540
WS PSLQNFSAS+C+I+G LP F+SCKSI+VIE NN+SG + +VS C L+++DL
Sbjct: 485 HIWSAPSLQNFSASSCSISGGLPVFESCKSITVIELSNNNISGMLTPTVSTCGSLKKMDL 544
Query: 541 ANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG 600
++N L G+IP S
Sbjct: 545 SHNNLRGAIP------------------------------------------------SD 556
Query: 601 KVLRLMGSSAYAGNPKLCGAPLQPCHASVAILGKGTGKLKFVLLLCAGIVMFIAAALLGI 660
KV + MG AY N LCG PL+ C A + KL VL+ C ++ + A L +
Sbjct: 557 KVFQSMGKHAYESNANLCGLPLKSCSA------YSSRKLVSVLVACLVSILLMVVAALAL 610
Query: 661 FFFRRGGKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSV 720
++ R+ +G WKM+SF GLP FTA+DVLRSF S E EA P S + KAVLPTGITV V
Sbjct: 611 YYIRQRSQGQWKMVSFAGLPHFTADDVLRSFGSPEPSEAV-PASVS--KAVLPTGITVIV 667
Query: 721 KKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD-YLPNG-NLSEKIR 778
+KIE + +V +T++G RH NL+RLLGFCYN H Y+LYD L G L+EK++
Sbjct: 668 RKIELHDKKKSVVLNVLTQMGNARHVNLVRLLGFCYNNHLVYVLYDNNLHTGTTLAEKMK 727
Query: 779 T-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYL 836
T K+DW K +I+ GVA+GLCFLHH+C PAIPHGD+K+SNI+FD++ +EP L EFGFKY+
Sbjct: 728 TKKKDWQTKKRIITGVAKGLCFLHHECLPAIPHGDVKSSNILFDDDKIEPCLGEFGFKYM 787
Query: 837 TQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGS-SLQNKP 895
L + + + ++ E DVY FG++ILEILTNG+L NAG +QNKP
Sbjct: 788 LHL------------NTDQMNDVIRVEKQKDVYNFGQLILEILTNGKLMNAGGLMIQNKP 835
Query: 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948
DGLL E+Y ENEV SS Q E+K V++VALLC RS SDRP ME+AL+LLS
Sbjct: 836 KDGLLREVYTENEVSSSDFKQGEVKRVVEVALLCIRSDQSDRPCMEDALRLLS 888
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357448387|ref|XP_003594469.1| Receptor-like kinase [Medicago truncatula] gi|355483517|gb|AES64720.1| Receptor-like kinase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/955 (54%), Positives = 650/955 (68%), Gaps = 89/955 (9%)
Query: 23 ANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPA--GKIYACSWSGVKCNKNNTIVVGI 80
A DPYS+ALLSLKSEL+D+ NSLHDW VP G N A G YACSWSG+KCNK++ V I
Sbjct: 25 AIDPYSQALLSLKSELIDNDNSLHDWVVPSGGNLAKSGSSYACSWSGIKCNKDSN-VTSI 83
Query: 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140
+LSMK L G L GK L +F E++D NLS+N FSG+ P EIFNLT+L SLDI NNFSG
Sbjct: 84 DLSMKKLGGVLSGKQLSVF-TEVIDFNLSNNLFSGKLPPEIFNLTNLKSLDIDTNNFSGQ 142
Query: 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLE 200
FP GI L++L+V DA+ N+FSG +PAE S+LE+LK+LNL G+ FSG IPS++GSF+SLE
Sbjct: 143 FPKGISKLKSLVVFDAWENNFSGQLPAEFSELENLKILNLYGNSFSGSIPSEYGSFRSLE 202
Query: 201 FLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260
L LA N L IP ELG LKTVT MEIG N YQG IP QLGNMS++Q L+IA ANLSGS
Sbjct: 203 SLLLAANSLTGSIPPELGNLKTVTSMEIGSNSYQGFIPPQLGNMSQLQNLEIADANLSGS 262
Query: 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLR 320
IPKEL +LT L+ LFL NQL G +P EFS++ L LDLSDN LSG IPESF++LK+L
Sbjct: 263 IPKELFSLTNLQILFLSINQLTGSIPSEFSKIKLLTFLDLSDNLLSGSIPESFSELKSLI 322
Query: 321 LLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGS 380
+LSL N+MSG VPE + +LPSLE L I +N FSGSLP++LG+NSKL+ VDVS NNFNGS
Sbjct: 323 ILSLGSNDMSGIVPEGIAELPSLEFLLISHNRFSGSLPKSLGKNSKLKSVDVSVNNFNGS 382
Query: 381 IPPDICSG------GVLFKLILFSN------------NFT-------GSLSPSLSNCSSL 415
IPP IC V + + L N NF+ G+L PS +C S+
Sbjct: 383 IPPSICQATQLSYFSVSYNMQLGGNIPSQIWSMPQLQNFSAYSCGILGNL-PSFESCKSI 441
Query: 416 VRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLG 475
+RL N+ SG IP S+ + I+LS N TG IP ++ LE ++SNN KL
Sbjct: 442 STIRLGRNNLSGTIPKSVSKCQALMIIELSDNNLTGQIPEELADIPILESVDLSNN-KLN 500
Query: 476 GMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVEL 535
G+IP + F S S+ ++ NN+SG+IPE +++ L
Sbjct: 501 GLIPEK-----------------------FGSSSSLKLLNVSFNNISGSIPEELADIPIL 537
Query: 536 ERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISG 595
E +DL+NNKL G IPE KFGS SS+ +LNVSFN+ISG
Sbjct: 538 ESVDLSNNKLNGLIPE------------------------KFGSSSSIKLLNVSFNNISG 573
Query: 596 SIPSGKVLRLMGSSAYAGNPKLCGAPLQPCHASVAILGK-GTGKLKFVLLLCAGIVMFIA 654
SIP GK +LM +SA+ GN +LCG PL+PC SV ILG T KL +LLL G+++ +
Sbjct: 574 SIPKGKSFKLMDTSAFVGNSELCGVPLRPCIKSVGILGSTNTWKLTHILLLSVGLLIILM 633
Query: 655 AALLGIFFFRRGGKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVLPT 714
GI F++G + WKMISF+GLPQFT NDVL SFN E KAVLPT
Sbjct: 634 VLGFGILHFKKGFESRWKMISFVGLPQFTPNDVLTSFNVVAAEHTEV------TKAVLPT 687
Query: 715 GITVSVKKIEWGATRIKIVSEFITRIG-TVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773
GITV VKKIEW IK+VSEFI R+G RHKNLIRLLGFCYN+ YLLYDYLPNGNL
Sbjct: 688 GITVLVKKIEWETRSIKLVSEFIMRLGNAARHKNLIRLLGFCYNQQLVYLLYDYLPNGNL 747
Query: 774 SEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833
+EKI + DW+ K++ ++G+ARGLCFLHH+CYPAIPHGDL ++N+VFDE+MEPHLAEFGF
Sbjct: 748 AEKIGMEWDWSGKFRTIVGIARGLCFLHHECYPAIPHGDLNSTNVVFDEDMEPHLAEFGF 807
Query: 834 KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 893
K++ +L+ GS P + E+ +M+EE+ DVY FG++ILEILT RLT+A +++ +
Sbjct: 808 KHVIELSKGSSPTTTK--QETEYNESMEEELGSDVYNFGKMILEILTGRRLTSAAANIHS 865
Query: 894 KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948
K + LL E+YN+NEV S+SS++ EIKLVL+VA+LCTRS SDRPSME+ALKLLS
Sbjct: 866 KSHETLLREVYNDNEVTSASSME-EIKLVLEVAMLCTRSRSSDRPSMEDALKLLS 919
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 955 | ||||||
| TAIR|locus:2163665 | 895 | MOL1 "MORE LATERAL GROWTH1" [A | 0.569 | 0.607 | 0.638 | 5.4e-189 | |
| TAIR|locus:2204350 | 980 | CLV1 "AT1G75820" [Arabidopsis | 0.895 | 0.872 | 0.353 | 8.8e-158 | |
| TAIR|locus:2025545 | 1029 | AT1G08590 [Arabidopsis thalian | 0.657 | 0.610 | 0.389 | 3e-155 | |
| TAIR|locus:2169965 | 1003 | BAM1 "BARELY ANY MERISTEM 1" [ | 0.967 | 0.921 | 0.351 | 5.3e-143 | |
| TAIR|locus:2097310 | 1002 | BAM2 "BARELY ANY MERISTEM 2" [ | 0.898 | 0.856 | 0.355 | 1.3e-137 | |
| TAIR|locus:2161158 | 1041 | PXY "PHLOEM INTERCALATED WITH | 0.648 | 0.594 | 0.439 | 5.8e-137 | |
| TAIR|locus:2032553 | 996 | HSL1 "HAESA-like 1" [Arabidops | 0.792 | 0.760 | 0.320 | 1e-128 | |
| UNIPROTKB|Q5Z9N5 | 994 | P0481E08.42 "Os06g0717200 prot | 0.841 | 0.808 | 0.349 | 1.4e-128 | |
| TAIR|locus:2005540 | 999 | HAE "HAESA" [Arabidopsis thali | 0.804 | 0.768 | 0.325 | 1.2e-123 | |
| TAIR|locus:2043540 | 960 | AT2G25790 [Arabidopsis thalian | 0.936 | 0.931 | 0.333 | 3.2e-120 |
| TAIR|locus:2163665 MOL1 "MORE LATERAL GROWTH1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1832 (650.0 bits), Expect = 5.4e-189, P = 5.4e-189
Identities = 352/551 (63%), Positives = 436/551 (79%)
Query: 5 HCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFV-PPGVNPAGKIYAC 63
H + F +F+ V+A +P +E+LL+LKS+L D+FNSL DWF+ P V+ + C
Sbjct: 6 HNKLCSFFYLCLFLTLVAAAEPQTESLLTLKSQLTDNFNSLKDWFINTPEVSD-NLVACC 64
Query: 64 SWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF- 122
SWSGV+CN+N+T VV ++LS K L+G+L GK +F EL++LN+S NSFSG+FP EIF
Sbjct: 65 SWSGVRCNQNSTSVVSVDLSSKNLAGSLSGKEFLVF-TELLELNISDNSFSGEFPAEIFF 123
Query: 123 NLTSLISLDISRNNFSGHFP---GGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179
N+T+L SLDISRNNFSG FP GG SL+NL+ LDA SNSFSG +P +SQLE+LKVLN
Sbjct: 124 NMTNLRSLDISRNNFSGRFPDGNGGDSSLKNLIFLDALSNSFSGPLPIHLSQLENLKVLN 183
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPW 239
LAGSYF+G IPSQ+GSFK+LEFLHL GNLL+ IP ELG L T+THMEIGYN Y+G IPW
Sbjct: 184 LAGSYFTGSIPSQYGSFKNLEFLHLGGNLLSGHIPQELGNLTTLTHMEIGYNSYEGVIPW 243
Query: 240 QLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299
++G MSE++YLDIAGANLSG +PK SNLTKLESLFLFRN L+ ++PWE +T+L +LD
Sbjct: 244 EIGYMSELKYLDIAGANLSGFLPKHFSNLTKLESLFLFRNHLSREIPWELGEITSLVNLD 303
Query: 300 LSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE 359
LSDN +SG IPESF+ LKNLRLL+LM+NEMSGT+PE + QLPSL+ LFIWNNYFSGSLP+
Sbjct: 304 LSDNHISGTIPESFSGLKNLRLLNLMFNEMSGTLPEVIAQLPSLDTLFIWNNYFSGSLPK 363
Query: 360 NLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGXXXXXXXXXXXXVRLR 419
+LG NSKLRWVDVSTN+F G IP ICS GVLFKLILFSNNFTG VR+R
Sbjct: 364 SLGMNSKLRWVDVSTNSFQGEIPQGICSRGVLFKLILFSNNFTGTLSPSLSNCSTLVRIR 423
Query: 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIP 479
LEDNSFSG IP FS++PDI+YIDLSRN TGGIP DI++A+KL+YFN+SNNP+LGG +P
Sbjct: 424 LEDNSFSGVIPFSFSEIPDISYIDLSRNKLTGGIPLDISKATKLDYFNISNNPELGGKLP 483
Query: 480 AQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERID 539
WS PSLQNFSAS+C+I+G LP F+SCKSI+VIE NN+SG + +VS C L+++D
Sbjct: 484 PHIWSAPSLQNFSASSCSISGGLPVFESCKSITVIELSNNNISGMLTPTVSTCGSLKKMD 543
Query: 540 LANNKLIGSIP 550
L++N L G+IP
Sbjct: 544 LSHNNLRGAIP 554
|
|
| TAIR|locus:2204350 CLV1 "AT1G75820" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1359 (483.5 bits), Expect = 8.8e-158, Sum P(2) = 8.8e-158
Identities = 318/900 (35%), Positives = 503/900 (55%)
Query: 5 HCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDF-NSLHDWFVPPGVNPAGKIYAC 63
H L+L+L+++ F P + D E LL+LKS ++ + LHDW ++ + C
Sbjct: 9 HLLFLHLYLF--FSPCFAYTD--MEVLLNLKSSMIGPKGHGLHDW-----IHSSSPDAHC 59
Query: 64 SWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFN 123
S+SGV C+ ++ V+ +N+S L G + P LV+L L+ N+F+G+ P+E+ +
Sbjct: 60 SFSGVSCD-DDARVISLNVSFTPLFGTI--SPEIGMLTHLVNLTLAANNFTGELPLEMKS 116
Query: 124 LTSLISLDISRN-NFSGHFPGGI-QSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181
LTSL L+IS N N +G FPG I +++ +L VLD ++N+F+G +P E+S+L+ LK L+
Sbjct: 117 LTSLKVLNISNNGNLTGTFPGEILKAMVDLEVLDTYNNNFNGKLPPEMSELKKLKYLSFG 176
Query: 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGY-NFYQGNIPWQ 240
G++FSG IP +G +SLE+L L G L+ + PA L LK + M IGY N Y G +P +
Sbjct: 177 GNFFSGEIPESYGDIQSLEYLGLNGAGLSGKSPAFLSRLKNLREMYIGYYNSYTGGVPPE 236
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
G +++++ LD+A L+G IP LSNL L +LFL N L G +P E S + +LKSLDL
Sbjct: 237 FGGLTKLEILDMASCTLTGEIPTSLSNLKHLHTLFLHINNLTGHIPPELSGLVSLKSLDL 296
Query: 301 SDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN 360
S N+L+G IP+SF +L N+ L++L N + G +PE++ +LP LE+ +W N F+ LP N
Sbjct: 297 SINQLTGEIPQSFINLGNITLINLFRNNLYGQIPEAIGELPKLEVFEVWENNFTLQLPAN 356
Query: 361 LGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGXXXXXXXXXXXXVRLRL 420
LGRN L +DVS N+ G IP D+C G L LIL +N F G ++R+
Sbjct: 357 LGRNGNLIKLDVSDNHLTGLIPKDLCRGEKLEMLILSNNFFFGPIPEELGKCKSLTKIRI 416
Query: 421 EDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPA 480
N +G +P LP + I+L+ N F+G +P ++ L+ +SNN G IP
Sbjct: 417 VKNLLNGTVPAGLFNLPLVTIIELTDNFFSGELPVTMS-GDVLDQIYLSNN-WFSGEIPP 474
Query: 481 QTWSLPSLQNFSASACNITGNLP-PFKSCKSISVIESHMNNLSGTIPESVSNCVELERID 539
+ P+LQ GN+P K +S I + NN++G IP+S+S C L +D
Sbjct: 475 AIGNFPNLQTLFLDRNRFRGNIPREIFELKHLSRINTSANNITGGIPDSISRCSTLISVD 534
Query: 540 LANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPS 599
L+ N++ G IP+ + + LG L++S N L+G IP G+ +SLT L++SFND+SG +P
Sbjct: 535 LSRNRINGEIPKGINNVKNLGTLNISGNQLTGSIPTGIGNMTSLTTLDLSFNDLSGRVPL 594
Query: 600 GKVLRLMGSSAYAGNPKLC-----GAPLQPCHASVAILGKGTGKLKFVLLLCAGIV-MXX 653
G + +++AGN LC P +P S + V+ + A I +
Sbjct: 595 GGQFLVFNETSFAGNTYLCLPHRVSCPTRPGQTSDHNHTALFSPSRIVITVIAAITGLIL 654
Query: 654 XXXXXXXXXXRRGGKG-HWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGC--KA 710
++ K WK+ +F L F + DVL EE + AG +
Sbjct: 655 ISVAIRQMNKKKNQKSLAWKLTAFQKL-DFKSEDVLECLK----EENIIGKGGAGIVYRG 709
Query: 711 VLPTGITVSVKKIEW---GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767
+P + V++K++ G + +E T +G +RH++++RLLG+ N+ LLY+Y
Sbjct: 710 SMPNNVDVAIKRLVGRGTGRSDHGFTAEIQT-LGRIRHRHIVRLLGYVANKDTNLLLYEY 768
Query: 768 LPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 823
+PNG+L E + + W ++++ + A+GLC+LHHDC P I H D+K++NI+ D +
Sbjct: 769 MPNGSLGELLHGSKGGHLQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSD 828
Query: 824 MEPHLAEFGF-KYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEIL 879
E H+A+FG K+L A + IA + + E+ +K + DVY FG ++LE++
Sbjct: 829 FEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELI 888
|
|
| TAIR|locus:2025545 AT1G08590 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1187 (422.9 bits), Expect = 3.0e-155, Sum P(2) = 3.0e-155
Identities = 247/634 (38%), Positives = 378/634 (59%)
Query: 3 IFHCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYA 62
+F Y F FV + + + E LL+ KS+L D N+L DW P ++
Sbjct: 6 LFFLFYYIGFALFPFVSSETFQNSEQEILLAFKSDLFDPSNNLQDWKRPENATTFSELVH 65
Query: 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF 122
C W+GV C+ N V + LS LSG + + F L L+LS+N+F P +
Sbjct: 66 CHWTGVHCDANG-YVAKLLLSNMNLSGNVSDQIQS--FPSLQALDLSNNAFESSLPKSLS 122
Query: 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182
NLTSL +D+S N+F G FP G+ L ++A SN+FSG +P ++ L+VL+ G
Sbjct: 123 NLTSLKVIDVSVNSFFGTFPYGLGMATGLTHVNASSNNFSGFLPEDLGNATTLEVLDFRG 182
Query: 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG 242
YF G +PS F + K+L+FL L+GN ++P +G L ++ + +GYN + G IP + G
Sbjct: 183 GYFEGSVPSSFKNLKNLKFLGLSGNNFGGKVPKVIGELSSLETIILGYNGFMGEIPEEFG 242
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
++ +QYLD+A NL+G IP L L +L +++L++N+L G++P E +T+L LDLSD
Sbjct: 243 KLTRLQYLDLAVGNLTGQIPSSLGQLKQLTTVYLYQNRLTGKLPRELGGMTSLVFLDLSD 302
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362
N+++G IP +LKNL+LL+LM N+++G +P + +LP+LE+L +W N GSLP +LG
Sbjct: 303 NQITGEIPMEVGELKNLQLLNLMRNQLTGIIPSKIAELPNLEVLELWQNSLMGSLPVHLG 362
Query: 363 RNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGXXXXXXXXXXXXVRLRLED 422
+NS L+W+DVS+N +G IP +C L KLILF+N+F+G VR+R++
Sbjct: 363 KNSPLKWLDVSSNKLSGDIPSGLCYSRNLTKLILFNNSFSGQIPEEIFSCPTLVRVRIQK 422
Query: 423 NSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQT 482
N SG IP LP + +++L++N TG IP DI ++ L + ++S N L + +
Sbjct: 423 NHISGSIPAGSGDLPMLQHLELAKNNLTGKIPDDIALSTSLSFIDISFN-HLSSL-SSSI 480
Query: 483 WSLPSLQNFSASACNITGNLP-PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLA 541
+S P+LQ F AS N G +P + S+SV++ N+ SG IPE +++ +L ++L
Sbjct: 481 FSSPNLQTFIASHNNFAGKIPNQIQDRPSLSVLDLSFNHFSGGIPERIASFEKLVSLNLK 540
Query: 542 NNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGK 601
+N+L+G IP+ LA + +L VLDLS+NSL+G IPA G+ +L +LNVSFN + G IPS
Sbjct: 541 SNQLVGEIPKALAGMHMLAVLDLSNNSLTGNIPADLGASPTLEMLNVSFNKLDGPIPSNM 600
Query: 602 VLRLMGSSAYAGNPKLCGAPLQPCHASVAILGKG 635
+ + GN LCG L PC S+A+ KG
Sbjct: 601 LFAAIDPKDLVGNNGLCGGVLPPCSKSLALSAKG 634
|
|
| TAIR|locus:2169965 BAM1 "BARELY ANY MERISTEM 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1398 (497.2 bits), Expect = 5.3e-143, P = 5.3e-143
Identities = 345/982 (35%), Positives = 518/982 (52%)
Query: 9 LNLFIWLVFVPAVS----ANDPYSE--ALLSLKSELV---DDFNS-LHDWFVPPGVNPAG 58
+ LF+ L+F+ +S A+ P SE ALLSLK+ L DD NS L W V
Sbjct: 1 MKLFLLLLFLLHISHTFTASRPISEFRALLSLKTSLTGAGDDKNSPLSSWKVSTSF---- 56
Query: 59 KIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFP 118
C+W GV C+ + V ++LS LSG L P L +L+L+ N SG P
Sbjct: 57 ----CTWIGVTCDVSRRHVTSLDLSGLNLSGTL--SPDVSHLRLLQNLSLAENLISGPIP 110
Query: 119 VEIFNLTSLISLDISRNNFSGHFPGGIQS-LRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177
EI +L+ L L++S N F+G FP I S L NL VLD ++N+ +G +P ++ L L+
Sbjct: 111 PEISSLSGLRHLNLSNNVFNGSFPDEISSGLVNLRVLDVYNNNLTGDLPVSVTNLTQLRH 170
Query: 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGY-NFYQGN 236
L+L G+YF+G IP +GS+ +E+L ++GN L +IP E+G L T+ + IGY N ++
Sbjct: 171 LHLGGNYFAGKIPPSYGSWPVIEYLAVSGNELVGKIPPEIGNLTTLRELYIGYYNAFEDG 230
Query: 237 IPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK 296
+P ++GN+SE+ D A L+G IP E+ L KL++LFL N +G + WE +++LK
Sbjct: 231 LPPEIGNLSELVRFDGANCGLTGEIPPEIGKLQKLDTLFLQVNVFSGPLTWELGTLSSLK 290
Query: 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGS 356
S+DLS+N +G IP SFA+LKNL LL+L N++ G +PE + LP LE+L +W N F+GS
Sbjct: 291 SMDLSNNMFTGEIPASFAELKNLTLLNLFRNKLHGEIPEFIGDLPELEVLQLWENNFTGS 350
Query: 357 LPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGXXXXXXXXXXXXV 416
+P+ LG N KL VD+S+N G++PP++CSG L LI N G
Sbjct: 351 IPQKLGENGKLNLVDLSSNKLTGTLPPNMCSGNKLETLITLGNFLFGSIPDSLGKCESLT 410
Query: 417 RLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGG 476
R+R+ +N +G IP LP + ++L N +G +P + L ++SNN +L G
Sbjct: 411 RIRMGENFLNGSIPKGLFGLPKLTQVELQDNYLSGELPVAGGVSVNLGQISLSNN-QLSG 469
Query: 477 MIPAQTWSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVEL 535
+P + +Q G +P + +S I+ N SG I +S C L
Sbjct: 470 PLPPAIGNFTGVQKLLLDGNKFQGPIPSEVGKLQQLSKIDFSHNLFSGRIAPEISRCKLL 529
Query: 536 ERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISG 595
+DL+ N+L G IP + + +L L+LS N L G IP S SLT L+ S+N++SG
Sbjct: 530 TFVDLSRNELSGEIPNEITAMKILNYLNLSRNHLVGSIPGSISSMQSLTSLDFSYNNLSG 589
Query: 596 SIPSGKVLRLMGSSAYAGNPKLCGAPLQPCHASVAILG-----KGTGKLKFVLLLCAGIV 650
+P +++ GNP LCG L PC VA G KG LLL G++
Sbjct: 590 LVPGTGQFSYFNYTSFLGNPDLCGPYLGPCKDGVAKGGHQSHSKGPLSASMKLLLVLGLL 649
Query: 651 MXXXXXXXXXXXXRRGGKGH-----WKMISFLGLPQFTANDVLRSFNSTECEEAARPQSA 705
+ R K W++ +F L FT +DVL S E+ +
Sbjct: 650 VCSIAFAVVAIIKARSLKKASESRAWRLTAFQRL-DFTCDDVLDSLK----EDNIIGKGG 704
Query: 706 AGC--KAVLPTGITVSVKKI---EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 760
AG K V+P G V+VK++ G++ + I +G +RH++++RLLGFC N
Sbjct: 705 AGIVYKGVMPNGDLVAVKRLAAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHET 764
Query: 761 AYLLYDYLPNGNLSEKIRTKRD----WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKAS 816
L+Y+Y+PNG+L E + K+ W +YKI L A+GLC+LHHDC P I H D+K++
Sbjct: 765 NLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIALEAAKGLCYLHHDCSPLIVHRDVKSN 824
Query: 817 NIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFG 872
NI+ D N E H+A+FG K+L + IA + + E+ +K + DVY FG
Sbjct: 825 NILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFG 884
Query: 873 EIILEILTN----GRLTNAGSSLQ--NKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926
++LE++T G + +Q K D + + SS E+ V VA
Sbjct: 885 VVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKDSVLKVLDPRLSSIPIHEVTHVFYVA 944
Query: 927 LLCTRSTPSDRPSMEEALKLLS 948
+LC +RP+M E +++L+
Sbjct: 945 MLCVEEQAVERPTMREVVQILT 966
|
|
| TAIR|locus:2097310 BAM2 "BARELY ANY MERISTEM 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1347 (479.2 bits), Expect = 1.3e-137, P = 1.3e-137
Identities = 320/900 (35%), Positives = 485/900 (53%)
Query: 7 LYLNLFIWLVFVPAVSANDPYSE--ALLSLKSELVDDFNS--LHDWFVPPGVNPAGKIYA 62
L L L + L + + P +E ALLSLKS D +S L W N +
Sbjct: 5 LLLLLLLLLHISHSFTVAKPITELHALLSLKSSFTIDEHSPLLTSW------NLSTTF-- 56
Query: 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF 122
CSW+GV C+ + V ++LS LSG L + L +L+L+ N SG P +I
Sbjct: 57 CSWTGVTCDVSLRHVTSLDLSGLNLSGTLSSDVAHLPL--LQNLSLAANQISGPIPPQIS 114
Query: 123 NLTSLISLDISRNNFSGHFPGGIQS-LRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181
NL L L++S N F+G FP + S L NL VLD ++N+ +G +P ++ L L+ L+L
Sbjct: 115 NLYELRHLNLSNNVFNGSFPDELSSGLVNLRVLDLYNNNLTGDLPVSLTNLTQLRHLHLG 174
Query: 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGY-NFYQGNIPWQ 240
G+YFSG IP+ +G++ LE+L ++GN L +IP E+G L T+ + IGY N ++ +P +
Sbjct: 175 GNYFSGKIPATYGTWPVLEYLAVSGNELTGKIPPEIGNLTTLRELYIGYYNAFENGLPPE 234
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
+GN+SE+ D A L+G IP E+ L KL++LFL N G + E +++LKS+DL
Sbjct: 235 IGNLSELVRFDAANCGLTGEIPPEIGKLQKLDTLFLQVNAFTGTITQELGLISSLKSMDL 294
Query: 301 SDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN 360
S+N +G IP SF+ LKNL LL+L N++ G +PE + ++P LE+L +W N F+GS+P+
Sbjct: 295 SNNMFTGEIPTSFSQLKNLTLLNLFRNKLYGAIPEFIGEMPELEVLQLWENNFTGSIPQK 354
Query: 361 LGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGXXXXXXXXXXXXVRLRL 420
LG N +L +D+S+N G++PP++CSG L LI N G R+R+
Sbjct: 355 LGENGRLVILDLSSNKLTGTLPPNMCSGNRLMTLITLGNFLFGSIPDSLGKCESLTRIRM 414
Query: 421 EDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQAS-KLEYFNVSNNPKLGGMIP 479
+N +G IP + LP ++ ++L N TG +P S L ++SNN +L G +P
Sbjct: 415 GENFLNGSIPKELFGLPKLSQVELQDNYLTGELPISGGGVSGDLGQISLSNN-QLSGSLP 473
Query: 480 AQTWSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELERI 538
A +L +Q +G++PP + +S ++ N SG I +S C L +
Sbjct: 474 AAIGNLSGVQKLLLDGNKFSGSIPPEIGRLQQLSKLDFSHNLFSGRIAPEISRCKLLTFV 533
Query: 539 DLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIP 598
DL+ N+L G IP L + +L L+LS N L G IP S SLT ++ S+N++SG +P
Sbjct: 534 DLSRNELSGDIPNELTGMKILNYLNLSRNHLVGSIPVTIASMQSLTSVDFSYNNLSGLVP 593
Query: 599 SGKVLRLMGSSAYAGNPKLCGAPLQPC----HASVAILGKGTGKLKFVL-LLCAGIVMXX 653
S +++ GN LCG L PC H S T KL VL LL +V
Sbjct: 594 STGQFSYFNYTSFVGNSHLCGPYLGPCGKGTHQSHVKPLSATTKLLLVLGLLFCSMVFAI 653
Query: 654 XXXXXXXXXXRRGGKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGC--KAV 711
W++ +F L FT +DVL S E+ + AG K
Sbjct: 654 VAIIKARSLRNASEAKAWRLTAFQRL-DFTCDDVLDSLK----EDNIIGKGGAGIVYKGT 708
Query: 712 LPTGITVSVKKI---EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768
+P G V+VK++ G++ + I +G +RH++++RLLGFC N L+Y+Y+
Sbjct: 709 MPKGDLVAVKRLATMSHGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYM 768
Query: 769 PNGNLSEKIRTKRD----WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM 824
PNG+L E + K+ W +YKI L A+GLC+LHHDC P I H D+K++NI+ D N
Sbjct: 769 PNGSLGEVLHGKKGGHLHWNTRYKIALEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNF 828
Query: 825 EPHLAEFGF-KYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEILT 880
E H+A+FG K+L + IA + + E+ +K + DVY FG ++LE++T
Sbjct: 829 EAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT 888
|
|
| TAIR|locus:2161158 PXY "PHLOEM INTERCALATED WITH XYLEM" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1341 (477.1 bits), Expect = 5.8e-137, P = 5.8e-137
Identities = 275/626 (43%), Positives = 384/626 (61%)
Query: 3 IFHCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYA 62
+ H L L L + F P +LLSLK+ L ++ DW VP VN
Sbjct: 11 VLHPLLLLLLPFFAFNSLALKFSPQLLSLLSLKTSLSGPPSAFQDWKVP--VNGQNDAVW 68
Query: 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF 122
CSWSGV C+ V+ ++LS + LSG +P + +R + + L+ LNLS NS G FP IF
Sbjct: 69 CSWSGVVCDNVTAQVISLDLSHRNLSGRIPIQ-IR-YLSSLLYLNLSGNSLEGSFPTSIF 126
Query: 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182
+LT L +LDISRN+F FP GI L+ L V +AFSN+F G +P+++S+L L+ LN G
Sbjct: 127 DLTKLTTLDISRNSFDSSFPPGISKLKFLKVFNAFSNNFEGLLPSDVSRLRFLEELNFGG 186
Query: 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG 242
SYF G IP+ +G + L+F+HLAGN+L ++P LG+L + HMEIGYN + GNIP +
Sbjct: 187 SYFEGEIPAAYGGLQRLKFIHLAGNVLGGKLPPRLGLLTELQHMEIGYNHFNGNIPSEFA 246
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
+S ++Y D++ +LSGS+P+EL NL+ LE+LFLF+N G++P +S + +LK LD S
Sbjct: 247 LLSNLKYFDVSNCSLSGSLPQELGNLSNLETLFLFQNGFTGEIPESYSNLKSLKLLDFSS 306
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362
N+LSG IP F+ LKNL LSL+ N +SG VPE + +LP L LF+WNN F+G LP LG
Sbjct: 307 NQLSGSIPSGFSTLKNLTWLSLISNNLSGEVPEGIGELPELTTLFLWNNNFTGVLPHKLG 366
Query: 363 RNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGXXXXXXXXXXXXVRLRLED 422
N KL +DVS N+F G+IP +C G L+KLILFSN F G R R ++
Sbjct: 367 SNGKLETMDVSNNSFTGTIPSSLCHGNKLYKLILFSNMFEGELPKSLTRCESLWRFRSQN 426
Query: 423 NSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQT 482
N +G IP+ F L ++ ++DLS N FT IP D A L+Y N+S N +P
Sbjct: 427 NRLNGTIPIGFGSLRNLTFVDLSNNRFTDQIPADFATAPVLQYLNLSTN-FFHRKLPENI 485
Query: 483 WSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLAN 542
W P+LQ FSAS N+ G +P + CKS IE N+L+GTIP + +C +L ++L+
Sbjct: 486 WKAPNLQIFSASFSNLIGEIPNYVGCKSFYRIELQGNSLNGTIPWDIGHCEKLLCLNLSQ 545
Query: 543 NKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKV 602
N L G IP ++ LP + +DLSHN L+G IP+ FGS ++T NVS+N + G IPSG
Sbjct: 546 NHLNGIIPWEISTLPSIADVDLSHNLLTGTIPSDFGSSKTITTFNVSYNQLIGPIPSGSF 605
Query: 603 LRLMGSSAYAGNPKLCGAPL-QPCHA 627
L S ++ N LCG + +PC++
Sbjct: 606 AHL-NPSFFSSNEGLCGDLVGKPCNS 630
|
|
| TAIR|locus:2032553 HSL1 "HAESA-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 981 (350.4 bits), Expect = 1.0e-128, Sum P(2) = 1.0e-128
Identities = 256/798 (32%), Positives = 405/798 (50%)
Query: 7 LYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWS 66
+YL LF++L+F S N L +K L D + L W N A C WS
Sbjct: 1 MYL-LFLFLLFPTVFSLNQD-GFILQQVKLSLDDPDSYLSSW----NSNDASP---CRWS 51
Query: 67 GVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTS 126
GV C + + V ++LS L+G P R+ + L L+L +NS + P+ I S
Sbjct: 52 GVSCAGDFSSVTSVDLSSANLAGPFPSVICRL--SNLAHLSLYNNSINSTLPLNIAACKS 109
Query: 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFS 186
L +LD+S+N +G P + + L+ LD N+FSG +PA + E+L+VL+L +
Sbjct: 110 LQTLDLSQNLLTGELPQTLADIPTLVHLDLTGNNFSGDIPASFGKFENLEVLSLVYNLLD 169
Query: 187 GPIPSQFGSFKSLEFLHLAGNLLN-DQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMS 245
G IP G+ +L+ L+L+ N + +IP E G L + M + G IP LG +S
Sbjct: 170 GTIPPFLGNISTLKMLNLSYNPFSPSRIPPEFGNLTNLEVMWLTECHLVGQIPDSLGQLS 229
Query: 246 EVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL 305
++ LD+A +L G IP L LT + + L+ N L G++P E + +L+ LD S N+L
Sbjct: 230 KLVDLDLALNDLVGHIPPSLGGLTNVVQIELYNNSLTGEIPPELGNLKSLRLLDASMNQL 289
Query: 306 SGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS 365
+G IP+ + L L+L N + G +P S+ P+L + I+ N +G LP++LG NS
Sbjct: 290 TGKIPDELCRVP-LESLNLYENNLEGELPASIALSPNLYEIRIFGNRLTGGLPKDLGLNS 348
Query: 366 KLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGXXXXXXXXXXXXVRLRLEDNSF 425
LRW+DVS N F+G +P D+C+ G L +L++ N+F+G R+RL N F
Sbjct: 349 PLRWLDVSENEFSGDLPADLCAKGELEELLIIHNSFSGVIPESLADCRSLTRIRLAYNRF 408
Query: 426 SGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSL 485
SG +P F LP +N ++L N F+G I I AS L +SNN + G +P + SL
Sbjct: 409 SGSVPTGFWGLPHVNLLELVNNSFSGEISKSIGGASNLSLLILSNN-EFTGSLPEEIGSL 467
Query: 486 PSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNK 544
+L SAS +G+LP S + ++ H N SG + + + +L ++LA+N+
Sbjct: 468 DNLNQLSASGNKFSGSLPDSLMSLGELGTLDLHGNQFSGELTSGIKSWKKLNELNLADNE 527
Query: 545 LIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLR 604
G IP+ + L VL LDLS N SG+IP S L LN+S+N +SG +P + +
Sbjct: 528 FTGKIPDEIGSLSVLNYLDLSGNMFSGKIPVSLQSLK-LNQLNLSYNRLSGDLPPS-LAK 585
Query: 605 LMGSSAYAGNPKLCGAPLQPCHASVAILGKG-TGKLKFVLLLCAGIVMXXXX----XXXX 659
M +++ GNP LCG C + +G L+ + +L A +++
Sbjct: 586 DMYKNSFIGNPGLCGDIKGLCGSENEAKKRGYVWLLRSIFVLAAMVLLAGVAWFYFKYRT 645
Query: 660 XXXXRRGGKGHWKMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVS 719
R + W ++SF L F+ +++L S + A S K VL G TV+
Sbjct: 646 FKKARAMERSKWTLMSFHKLG-FSEHEILESLDEDNVIGAGA--SGKVYKVVLTNGETVA 702
Query: 720 VKKIEWGATR----------IK--IVSE-F---ITRIGTVRHKNLIRLLGFCYNRHQAYL 763
VK++ G+ + K + E F + +G +RHKN+++L C R L
Sbjct: 703 VKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLL 762
Query: 764 LYDYLPNGNLSEKIRTKR 781
+Y+Y+PNG+L + + + +
Sbjct: 763 VYEYMPNGSLGDLLHSSK 780
|
|
| UNIPROTKB|Q5Z9N5 P0481E08.42 "Os06g0717200 protein" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 1262 (449.3 bits), Expect = 1.4e-128, P = 1.4e-128
Identities = 301/861 (34%), Positives = 470/861 (54%)
Query: 11 LFIWLVFVPAVSANDPYSEALLSLKSELVDDFNS-----LHDWFVPPGVNPAGKIYACSW 65
L + L+ P++++ D AL LK+ LV ++ L DW P +PA C++
Sbjct: 6 LLLLLLLPPSLASPDRDIYALAKLKAALVPSPSATAPPPLADWD-PAATSPAH----CTF 60
Query: 66 SGVKCNKNNTIVVGINLSMKGL-SGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNL 124
SGV C+ + VV INL+ L SG LP P + L +L ++ G P+E+ L
Sbjct: 61 SGVTCDGRSR-VVAINLTALPLHSGYLP--PEIALLDSLANLTIAACCLPGHVPLELPTL 117
Query: 125 TSLISLDISRNNFSGHFP----GGIQS--LRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178
SL L++S NN SGHFP GG S +L ++DA++N+ SG +P + L+ L
Sbjct: 118 PSLRHLNLSNNNLSGHFPVPDSGGGASPYFPSLELIDAYNNNLSGLLPPFSASHARLRYL 177
Query: 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGY-NFYQGNI 237
+L G+YF+G IP +G +LE+L L GN L+ +P L L + M IGY N Y G +
Sbjct: 178 HLGGNYFTGAIPDSYGDLAALEYLGLNGNTLSGHVPVSLSRLTRLREMYIGYYNQYDGGV 237
Query: 238 PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKS 297
P + G++ + LD++ NL+G +P EL L +L++LFL N+L+G++P + +++L S
Sbjct: 238 PPEFGDLGALLRLDMSSCNLTGPVPPELGRLQRLDTLFLQWNRLSGEIPPQLGDLSSLAS 297
Query: 298 LDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL 357
LDLS N L+G IP S A+L NL+LL+L N + G++P+ + LE+L +W+N +G++
Sbjct: 298 LDLSVNDLAGEIPPSLANLSNLKLLNLFRNHLRGSIPDFVAGFAQLEVLQLWDNNLTGNI 357
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGXXXXXXXXXXXXVR 417
P LG+N +L+ +D++TN+ G IP D+C+G L L+L N G R
Sbjct: 358 PAGLGKNGRLKTLDLATNHLTGPIPADLCAGRRLEMLVLMENGLFGPIPDSLGDCKTLTR 417
Query: 418 LRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGM 477
+RL N +G +P LP N ++L+ N TG +P D+ K+ + NN +GG
Sbjct: 418 VRLAKNFLTGPVPAGLFNLPQANMVELTDNLLTGELP-DVIGGDKIGMLLLGNNG-IGGR 475
Query: 478 IPAQTWSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELE 536
IP +LP+LQ S + N +G LPP + K++S + N L+G IP+ + C L
Sbjct: 476 IPPAIGNLPALQTLSLESNNFSGALPPEIGNLKNLSRLNVSGNALTGAIPDELIRCASLA 535
Query: 537 RIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGS 596
+DL+ N G IPE + L +L L++S N L+G++P + + +SLT L+VS+N +SG
Sbjct: 536 AVDLSRNGFSGEIPESITSLKILCTLNVSRNRLTGELPPEMSNMTSLTTLDVSYNSLSGP 595
Query: 597 IP-SGKVLRLMGSSAYAGNPKLCGAPL-QPCHASVAILGKGTG---KLKF-VLLLCAGIV 650
+P G+ L + S++ GNP LCG P+ C S+A G G G +L++ + +V
Sbjct: 596 VPMQGQFL-VFNESSFVGNPGLCGGPVADACPPSMAGGGGGAGSQLRLRWDSKKMLVALV 654
Query: 651 MXXXXXXXXXXXXRRG----------GKGHWKMISFLGLPQFTANDVLRSFNSTECEEAA 700
R+G G WKM +F L +F+A DV+ EC +
Sbjct: 655 AAFAAVAVAFLGARKGCSAWRSAARRRSGAWKMTAFQKL-EFSAEDVV------ECVKED 707
Query: 701 RPQSAAGCKAV---LPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFC 755
G V + G +++K++ G + S +T +G +RH+N++RLLGF
Sbjct: 708 NIIGKGGAGIVYHGVTRGAELAIKRLVGRGGGEHDRGFSAEVTTLGRIRHRNIVRLLGFV 767
Query: 756 YNRHQAYLLYDYLPNGNLSEKIRTKRD----WAAKYKIVLGVARGLCFLHHDCYPAIPHG 811
NR LLY+Y+PNG+L E + + W A+ ++ A GLC+LHHDC P I H
Sbjct: 768 SNRETNLLLYEYMPNGSLGEMLHGGKGGHLGWEARARVAAEAACGLCYLHHDCAPRIIHR 827
Query: 812 DLKASNIVFDENMEPHLAEFG 832
D+K++NI+ D E H+A+FG
Sbjct: 828 DVKSNNILLDSAFEAHVADFG 848
|
|
| TAIR|locus:2005540 HAE "HAESA" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 944 (337.4 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 264/811 (32%), Positives = 403/811 (49%)
Query: 3 IFHCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYA 62
+ +CL L L + ++P++S N + L K L D SL W V P
Sbjct: 1 MLYCLILLLCLSSTYLPSLSLNQD-ATILRQAKLGLSDPAQSLSSWSDNNDVTP------ 53
Query: 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF 122
C W GV C+ + VV ++LS L G P + L L+L +NS +G + F
Sbjct: 54 CKWLGVSCDATSN-VVSVDLSSFMLVGPFPS--ILCHLPSLHSLSLYNNSINGSLSADDF 110
Query: 123 NLT-SLISLDISRNNFSGHFPGGIQ-SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180
+ +LISLD+S N G P + +L NL L+ N+ S ++P+ + L+ LNL
Sbjct: 111 DTCHNLISLDLSENLLVGSIPKSLPFNLPNLKFLEISGNNLSDTIPSSFGEFRKLESLNL 170
Query: 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLN-DQIPAELGMLKTVTHMEI-GYNFYQGNIP 238
AG++ SG IP+ G+ +L+ L LA NL + QIP++LG L + + + G N G IP
Sbjct: 171 AGNFLSGTIPASLGNVTTLKELKLAYNLFSPSQIPSQLGNLTELQVLWLAGCNLV-GPIP 229
Query: 239 WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSL 298
L ++ + LD+ L+GSIP ++ L +E + LF N +G++P +TTLK
Sbjct: 230 PSLSRLTSLVNLDLTFNQLTGSIPSWITQLKTVEQIELFNNSFSGELPESMGNMTTLKRF 289
Query: 299 DLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLP 358
D S N+L+G IP++ +L NL L+L N + G +PES+ + +L L ++NN +G LP
Sbjct: 290 DASMNKLTGKIPDNL-NLLNLESLNLFENMLEGPLPESITRSKTLSELKLFNNRLTGVLP 348
Query: 359 ENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGXXXXXXXXXXXXVRL 418
LG NS L++VD+S N F+G IP ++C G L LIL N+F+G R+
Sbjct: 349 SQLGANSPLQYVDLSYNRFSGEIPANVCGEGKLEYLILIDNSFSGEISNNLGKCKSLTRV 408
Query: 419 RLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMI 478
RL +N SG+IP F LP ++ ++LS N FTG IP I A L +S N + G I
Sbjct: 409 RLSNNKLSGQIPHGFWGLPRLSLLELSDNSFTGSIPKTIIGAKNLSNLRISKN-RFSGSI 467
Query: 479 PAQTWSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELER 537
P + SL + S + + +G +P K +S ++ N LSG IP + L
Sbjct: 468 PNEIGSLNGIIEISGAENDFSGEIPESLVKLKQLSRLDLSKNQLSGEIPRELRGWKNLNE 527
Query: 538 IDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSI 597
++LANN L G IP+ + LPVL LDLS N SG+IP + + L VLN+S+N +SG I
Sbjct: 528 LNLANNHLSGEIPKEVGILPVLNYLDLSSNQFSGEIPLELQNLK-LNVLNLSYNHLSGKI 586
Query: 598 PSGKVLRLMGSSAYAGNPKLCGAPLQPCHASVAILGKGTGKLKFVLLLCAGIVMXXXXXX 657
P ++ + GNP LC C G + + L AG+V
Sbjct: 587 PPLYANKIYAHD-FIGNPGLCVDLDGLCRKITRSKNIGYVWILLTIFLLAGLVFVVGIVM 645
Query: 658 XXXXXXR-RGGKGHW----KMISFLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVL 712
+ R K K SF L F+ +++ + E S K L
Sbjct: 646 FIAKCRKLRALKSSTLAASKWRSFHKL-HFSEHEIADCLD--EKNVIGFGSSGKVYKVEL 702
Query: 713 PTGITVSVKKI---------EWGATRIK--IVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761
G V+VKK+ E+ + + + + + +GT+RHK+++RL C +
Sbjct: 703 RGGEVVAVKKLNKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDCK 762
Query: 762 YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLG 792
L+Y+Y+PNG+L++ + R K +VLG
Sbjct: 763 LLVYEYMPNGSLADVLHGDR----KGGVVLG 789
|
|
| TAIR|locus:2043540 AT2G25790 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1183 (421.5 bits), Expect = 3.2e-120, P = 3.2e-120
Identities = 321/963 (33%), Positives = 503/963 (52%)
Query: 12 FIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCN 71
F++L F + AN+ E LLS KS + D L W N C WSGV CN
Sbjct: 19 FLFLNF-SCLHANE--LELLLSFKSSIQDPLKHLSSWSYS-STNDV-----CLWSGVVCN 69
Query: 72 KNNTIVVGINLSMKGLSGA-LPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTS--LI 128
N + VV ++LS K +SG L R+ F L +NLS+N+ SG P +IF +S L
Sbjct: 70 -NISRVVSLDLSGKNMSGQILTAATFRLPF--LQTINLSNNNLSGPIPHDIFTTSSPSLR 126
Query: 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP 188
L++S NNFSG P G L NL LD +N F+G + +I +L+VL+L G+ +G
Sbjct: 127 YLNLSNNNFSGSIPRGF--LPNLYTLDLSNNMFTGEIYNDIGVFSNLRVLDLGGNVLTGH 184
Query: 189 IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ 248
+P G+ LEFL LA N L +P ELG +K + + +GYN G IP+Q+G +S +
Sbjct: 185 VPGYLGNLSRLEFLTLASNQLTGGVPVELGKMKNLKWIYLGYNNLSGEIPYQIGGLSSLN 244
Query: 249 YLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGP 308
+LD+ NLSG IP L +L KLE +FL++N+L+GQ+P + L SLD SDN LSG
Sbjct: 245 HLDLVYNNLSGPIPPSLGDLKKLEYMFLYQNKLSGQIPPSIFSLQNLISLDFSDNSLSGE 304
Query: 309 IPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLR 368
IPE A +++L +L L N ++G +PE + LP L++L +W+N FSG +P NLG+++ L
Sbjct: 305 IPELVAQMQSLEILHLFSNNLTGKIPEGVTSLPRLKVLQLWSNRFSGGIPANLGKHNNLT 364
Query: 369 WVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGXXXXXXXXXXXXVRLRLEDNSFSGE 428
+D+STNN G +P +C G L KLILFSN+ R+RL++N FSG+
Sbjct: 365 VLDLSTNNLTGKLPDTLCDSGHLTKLILFSNSLDSQIPPSLGMCQSLERVRLQNNGFSGK 424
Query: 429 IPLKFSQLPDINYIDLSRNGFTGGIPT-DINQASKLEYFNVSNNPKLGGMIPAQTWSLPS 487
+P F++L +N++DLS N G I T D+ Q LE ++S N K G +P + S
Sbjct: 425 LPRGFTKLQLVNFLDLSNNNLQGNINTWDMPQ---LEMLDLSVN-KFFGELPDFSRS-KR 479
Query: 488 LQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLI 546
L+ S I+G +P + I ++ N ++G IP +S+C L +DL++N
Sbjct: 480 LKKLDLSRNKISGVVPQGLMTFPEIMDLDLSENEITGVIPRELSSCKNLVNLDLSHNNFT 539
Query: 547 GSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLM 606
G IP A VL LDLS N LSG+IP G+ SL +N+S N + GS+P +
Sbjct: 540 GEIPSSFAEFQVLSDLDLSCNQLSGEIPKNLGNIESLVQVNISHNLLHGSLPFTGAFLAI 599
Query: 607 GSSAYAGNPKLCG----APLQPCHASVAILGKGTGKLKFVLL---LCAGIVMXXXXXXXX 659
++A GN LC + L+PC ++ K + K ++++ A + +
Sbjct: 600 NATAVEGNIDLCSENSASGLRPCK----VVRKRSTKSWWLIITSTFAAFLAVLVSGFFIV 655
Query: 660 XXXXRRGGKGHWKMISFL-GLP---QFTANDVLRSFNSTECEEAARPQSAAGCKAVLPTG 715
R K + G QF + ++SF + + Q+ K G
Sbjct: 656 LVFQRTHNVLEVKKVEQEDGTKWETQFFDSKFMKSFTVNTILSSLKDQNVLVDK----NG 711
Query: 716 ITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE 775
+ VK+++ + +++S+ + ++ HKN+++++ C + AYL+++ + LS+
Sbjct: 712 VHFVVKEVKKYDSLPEMISD-MRKLSD--HKNILKIVATCRSETVAYLIHEDVEGKRLSQ 768
Query: 776 KIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835
+ + W + KI+ G+ L FLH C PA+ G+L NIV D EP L G
Sbjct: 769 -VLSGLSWERRRKIMKGIVEALRFLHCRCSPAVVAGNLSPENIVIDVTDEPRLC-LGLPG 826
Query: 836 LTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP 895
L + D ++ A E+ E + M + D+YGFG ++L +LT G+ +++ +++
Sbjct: 827 LLCM-DAAYMAP----ETRE-HKEMTSKS--DIYGFGILLLHLLT-GKCSSSNEDIESG- 876
Query: 896 IDGLLGEM----YNENEVGS--SSSL-----QDEIKLVLDVALLCTRSTPSDRPSMEEAL 944
++G L + Y+ + + SS+ Q EI V+++AL CT P +RP L
Sbjct: 877 VNGSLVKWARYSYSNCHIDTWIDSSIDTSVHQREIVHVMNLALKCTAIDPQERPCTNNVL 936
Query: 945 KLL 947
+ L
Sbjct: 937 QAL 939
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.7.11 | 0.766 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.00061244 | hypothetical protein (955 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 955 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-178 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 6e-19 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-16 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 2e-16 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 5e-16 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-15 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-15 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 3e-15 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 5e-15 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 6e-15 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 4e-14 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 7e-14 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 9e-14 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 2e-13 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 1e-12 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 2e-12 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 6e-12 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 5e-11 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 8e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-10 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 2e-10 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 7e-10 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 2e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-09 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 4e-09 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 6e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 9e-09 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-08 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-08 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 3e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-08 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 4e-08 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 5e-08 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 5e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 6e-08 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 7e-08 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 8e-08 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 8e-08 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 1e-07 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 1e-07 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 1e-07 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 1e-07 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 2e-07 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-07 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-07 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 3e-07 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 4e-07 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 4e-07 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 5e-07 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 6e-07 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 1e-06 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 1e-06 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 2e-06 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 3e-06 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 3e-06 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 4e-06 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 5e-06 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 6e-06 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-05 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 1e-05 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 1e-05 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 2e-05 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 2e-05 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-05 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 3e-05 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 4e-05 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-05 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 5e-05 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 5e-05 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 6e-05 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 7e-05 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 7e-05 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 1e-04 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 1e-04 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 1e-04 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 1e-04 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 2e-04 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 2e-04 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-04 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 2e-04 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 3e-04 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 3e-04 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 3e-04 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 3e-04 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 4e-04 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 4e-04 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 4e-04 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 4e-04 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-04 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 6e-04 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 6e-04 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 7e-04 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 7e-04 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 0.001 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.002 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 0.002 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 0.002 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 0.003 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 0.003 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 0.003 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 0.003 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 0.003 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 0.003 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 542 bits (1397), Expect = e-178
Identities = 336/972 (34%), Positives = 508/972 (52%), Gaps = 60/972 (6%)
Query: 5 HCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACS 64
HC YL ++ +F+ + E LLS KS + D L +W N + + C
Sbjct: 8 HCPYLIFMLFFLFLNFSMLHAEELELLLSFKSSINDPLKYLSNW------NSSADV--CL 59
Query: 65 WSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNL 124
W G+ CN N++ VV I+LS K +SG + R+ + + + NLS+N SG P +IF
Sbjct: 60 WQGITCN-NSSRVVSIDLSGKNISGKISSAIFRLPYIQTI--NLSNNQLSGPIPDDIFTT 116
Query: 125 T-SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183
+ SL L++S NNF+G P G S+ NL LD +N SG +P +I LKVL+L G+
Sbjct: 117 SSSLRYLNLSNNNFTGSIPRG--SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGN 174
Query: 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGN 243
G IP+ + SLEFL LA N L QIP ELG +K++ + +GYN G IP+++G
Sbjct: 175 VLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGG 234
Query: 244 MSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDN 303
++ + +LD+ NL+G IP L NL L+ LFL++N+L+G +P + L SLDLSDN
Sbjct: 235 LTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDN 294
Query: 304 RLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 363
LSG IPE L+NL +L L N +G +P +L LP L++L +W+N FSG +P+NLG+
Sbjct: 295 SLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGK 354
Query: 364 NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDN 423
++ L +D+STNN G IP +CS G LFKLILFSN+ G + SL C SL R+RL+DN
Sbjct: 355 HNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDN 414
Query: 424 SFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTW 483
SFSGE+P +F++LP + ++D+S N G I + L+ +++ N GG+ ++
Sbjct: 415 SFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGL--PDSF 472
Query: 484 SLPSLQNFSASACNITGNLP-PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLAN 542
L+N S +G +P S + ++ N LSG IP+ +S+C +L +DL++
Sbjct: 473 GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSH 532
Query: 543 NKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKV 602
N+L G IP + +PVL LDLS N LSG+IP G+ SL +N+S N + GS+PS
Sbjct: 533 NQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGA 592
Query: 603 LRLMGSSAYAGNPKLCG----APLQPCHASVAILGKGTGKLKFVLLLCAGIVMFIAAALL 658
+ +SA AGN LCG + L PC + K ++ ++ A
Sbjct: 593 FLAINASAVAGNIDLCGGDTTSGLPPCK----RVRKTPSWWFYITCTLGAFLVLALVAFG 648
Query: 659 GIFFFRRGG---------KGHWKMISFLG--LPQFTANDVLRSFNSTECEEAARPQSAAG 707
+F R G W++ F T ND+L S + ++
Sbjct: 649 FVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYK 708
Query: 708 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767
K++ G+ VK+I I S I +G ++H N+++L+G C + AYL+++Y
Sbjct: 709 GKSIK-NGMQFVVKEIN---DVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY 764
Query: 768 LPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
+ NLSE +R W + KI +G+A+ L FLH C PA+ G+L I+ D EPH
Sbjct: 765 IEGKNLSEVLRN-LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPH 823
Query: 828 LAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT------- 880
L L F + + E+ D+YGFG I++E+LT
Sbjct: 824 LR-LSLPGLLCTDTKCFISSAYVAPETRETKDITEK--SDIYGFGLILIELLTGKSPADA 880
Query: 881 ----NGRLTN-AGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPS 935
+G + A + +D + + S Q+EI V+++AL CT + P+
Sbjct: 881 EFGVHGSIVEWARYCYSDCHLDMWIDPSIRGD----VSVNQNEIVEVMNLALHCTATDPT 936
Query: 936 DRPSMEEALKLL 947
RP + LK L
Sbjct: 937 ARPCANDVLKTL 948
|
Length = 968 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 6e-19
Identities = 68/258 (26%), Positives = 103/258 (39%), Gaps = 50/258 (19%)
Query: 714 TGITVSVKKI------EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767
TG V+VK + E I + + H N++RL+ ++ YL+ +Y
Sbjct: 23 TGKIVAVKILKKRSEKSK--KDQTARRE-IRILRRLSHPNIVRLIDAFEDKDHLYLVMEY 79
Query: 768 LPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM 824
G+L + + + AK KI L + RGL +LH + I H DLK NI+ DEN
Sbjct: 80 CEGGDLFDYLSRGGPLSEDEAK-KIALQILRGLEYLHSN---GIIHRDLKPENILLDENG 135
Query: 825 EPHLAEFGFKYLTQLADGSFPAKIAWTESGEF--------YNA----MKEEMY---MDVY 869
+A+FG AK S Y A + Y +DV+
Sbjct: 136 VVKIADFGL------------AKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVW 183
Query: 870 GFGEIILEILTNGRL--TNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927
G +IL L G+ + Q + I +LG +E SS ++ L+
Sbjct: 184 SLG-VILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKK--- 239
Query: 928 LCTRSTPSDRPSMEEALK 945
C PS RP+ EE L+
Sbjct: 240 -CLNKDPSKRPTAEEILQ 256
|
Length = 260 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 84.5 bits (209), Expect = 1e-16
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 14/150 (9%)
Query: 521 LSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSC 580
L G IP +S L+ I+L+ N + G+IP L + L VLDLS+NS +G IP G
Sbjct: 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL 489
Query: 581 SSLTVLNVSFNDISGSIPSGKVLRLM--GSSAYAGNPKLCGAP-LQPC--HASVAILGKG 635
+SL +LN++ N +SG +P+ RL+ S + N LCG P L+ C H SV
Sbjct: 490 TSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACGPHLSVGA---- 545
Query: 636 TGKLKFVLLLCAGIVMFIAAALLGIFFFRR 665
K+ + + + A + +++R
Sbjct: 546 --KIGIAFGVSVAFLFLVICA---MCWWKR 570
|
Length = 623 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 79.9 bits (198), Expect = 2e-16
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 43/254 (16%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
+ V+VK ++ A+ +I EF+ + H N+++LLG C Y++ +Y+
Sbjct: 27 KKVEVAVKTLKEDASEQQI-EEFLREARIMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEG 85
Query: 771 GNLSEKIRTKRD---WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
G+L +R R + L +ARG+ +L + I H DL A N + EN+
Sbjct: 86 GDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESKNF--I-HRDLAARNCLVGENLVVK 142
Query: 828 LAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEII 875
+++FG Y + G P I W ES G+F + DV+ FG ++
Sbjct: 143 ISDFGLSRDLYDDDYYRK-RGGKLP--IRWMAPESLKEGKFTSK------SDVWSFGVLL 193
Query: 876 LEILTNGRLTNAGSSLQNKPIDGLLG-EMYNENEVGSSSSLQDEI-KLVLDVALLCTRST 933
EI T G +P G+ E+ + G + D+ L C
Sbjct: 194 WEIFTLGE----------QPYPGMSNEEVLEYLKNGYRLPQPPNCPPELYDLMLQCWAED 243
Query: 934 PSDRPSMEEALKLL 947
P DRP+ E +++L
Sbjct: 244 PEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 77.7 bits (192), Expect = 5e-16
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 26/181 (14%)
Query: 714 TGITVSVKKI---EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
TG V++K I + + +++ E I + + H N+++L G + + YL+ +Y
Sbjct: 17 TGKKVAIKIIKKEDSSSLLEELLRE-IEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEG 75
Query: 771 GNLSEKIRTKR---DWAAKYKIVLGVARGLCFLH-HDCYPAIPHGDLKASNIVFDE-NME 825
G+L + ++ +I+L + GL +LH + I H DLK NI+ D N +
Sbjct: 76 GSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNG----IIHRDLKPENILLDSDNGK 131
Query: 826 PHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNA---MKEEMY----MDVYGFGEIILE 877
LA+FG K LT D S I T Y A + + Y D++ G I+ E
Sbjct: 132 VKLADFGLSKLLTS--DKSLLKTIVGT---PAYMAPEVLLGKGYYSEKSDIWSLGVILYE 186
Query: 878 I 878
+
Sbjct: 187 L 187
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 77.6 bits (192), Expect = 1e-15
Identities = 64/259 (24%), Positives = 108/259 (41%), Gaps = 50/259 (19%)
Query: 713 PTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
+ V+VK ++ A+ +I EF+ + H N+++LLG C ++ +Y+P
Sbjct: 26 GKEVEVAVKTLKEDASEQQI-EEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMP 84
Query: 770 NGNLSEKIRTKRD----WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
G+L + +R R + L +ARG+ +L + I H DL A N + EN+
Sbjct: 85 GGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNF--I-HRDLAARNCLVGENLV 141
Query: 826 PHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGE 873
+++FG Y G P I W ES G+F + DV+ FG
Sbjct: 142 VKISDFGLSRDLYDDDYYKV-KGGKLP--IRWMAPESLKEGKFTSK------SDVWSFGV 192
Query: 874 IILEILTNGRLTNAGSSLQNKPIDGLLG-EMYNENEVGSS----SSLQDEIKLVLDVALL 928
++ EI T G +P G+ E+ + G + E+ + L
Sbjct: 193 LLWEIFTLGE----------EPYPGMSNAEVLEYLKKGYRLPKPPNCPPEL---YKLMLQ 239
Query: 929 CTRSTPSDRPSMEEALKLL 947
C P DRP+ E +++L
Sbjct: 240 CWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 76.8 bits (190), Expect = 2e-15
Identities = 59/272 (21%), Positives = 104/272 (38%), Gaps = 70/272 (25%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
V+VK ++ A+ + +F+ + H N++RLLG C YL+ +Y+
Sbjct: 22 KTTEVAVKTLKEDASEEER-KDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80
Query: 771 GNLSEKIRTKRDWAA-----------KYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 819
G+L + +R R + +A+G+ +L H DL A N +
Sbjct: 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCL 137
Query: 820 FDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMYM---D 867
E++ +++FG Y + G P + W ES +K+ ++ D
Sbjct: 138 VGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIR--WMAPES------LKDGIFTSKSD 189
Query: 868 VYGFGEIILEILTNGRLTNAGSSLQN------------KPIDGLLGEMYNENEVGSSSSL 915
V+ FG ++ EI T G G S + KP + E+Y
Sbjct: 190 VWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKP-EYCPDELY----------- 237
Query: 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 947
++ L C + P DRP+ E ++ L
Sbjct: 238 --------ELMLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 76.4 bits (189), Expect = 3e-15
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 58/257 (22%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
T V+VK ++ GA+ + EF+ + H N++RLLG C Y++ +Y+P
Sbjct: 27 TETKVAVKTLKEGASEEER-EEFLEEASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPG 85
Query: 771 GNLSEKIRTKRD---WAAKYKIVLGVARGLCFLH-HDCYPAIPHGDLKASNIVFDENMEP 826
G+L + +R + ++ L +A+G+ +L + H DL A N + EN+
Sbjct: 86 GDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESKNF----VHRDLAARNCLVTENLVV 141
Query: 827 HLAEFG-------FKYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEI 874
+++FG Y + G P I W ES G+F + DV+ FG +
Sbjct: 142 KISDFGLSRDIYEDDYYRKRGGGKLP--IKWMAPESLKDGKFTSK------SDVWSFGVL 193
Query: 875 ILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL---------VLDV 925
+ EI T G G S + E+ L+D +L + ++
Sbjct: 194 LWEIFTLGEQPYPGMSNE---------EVLE--------LLEDGYRLPRPENCPDELYEL 236
Query: 926 ALLCTRSTPSDRPSMEE 942
L C P DRP+ E
Sbjct: 237 MLQCWAYDPEDRPTFSE 253
|
Length = 258 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 75.6 bits (187), Expect = 5e-15
Identities = 68/258 (26%), Positives = 106/258 (41%), Gaps = 43/258 (16%)
Query: 708 CKAV-LPTGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAY 762
A TG V++K I+ +IK E I R + ++H N++RL + + Y
Sbjct: 16 YLARDKKTGKLVAIKVIK--KKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLY 73
Query: 763 LLYDYLPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 818
L+ +Y G+L + ++ + D A Y + + L +LH I H DLK NI
Sbjct: 74 LVMEYCEGGDLFDLLKKRGRLSEDEARFY--LRQILSALEYLHSKG---IVHRDLKPENI 128
Query: 819 VFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESG-EFYNA---MKEEMY---MDVYGF 871
+ DE+ LA+FG QL G T G Y A + + Y +D++
Sbjct: 129 LLDEDGHVKLADFGLA--RQLDPGEK----LTTFVGTPEYMAPEVLLGKGYGKAVDIWSL 182
Query: 872 GEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN--ENEVGSSSSLQDEIK--LVLDVAL 927
G I+ E+LT G+ G + + E S +D I+ LV D
Sbjct: 183 GVILYELLT-GKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKD--- 238
Query: 928 LCTRSTPSDRPSMEEALK 945
P R + EEAL+
Sbjct: 239 ------PEKRLTAEEALQ 250
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 6e-15
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 279 NQ-LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL 337
NQ L G +P + S++ L+S++LS N + G IP S + +L +L L YN +G++PESL
Sbjct: 427 NQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESL 486
Query: 338 VQLPSLEILFIWNNYFSGSLPENLG 362
QL SL IL + N SG +P LG
Sbjct: 487 GQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 73.0 bits (179), Expect = 4e-14
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 36/244 (14%)
Query: 715 GITVSVKKIEWGATRIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771
+TV+VK ++ ++ EF+ + ++H NL++LLG C Y++ +++ G
Sbjct: 31 SLTVAVKTLKEDTMEVE---EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG 87
Query: 772 NLSEKIR----TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
NL + +R + + + ++ + +L + H DL A N + EN
Sbjct: 88 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVK 144
Query: 828 LAEFGFKYL------TQLADGSFPAKIAWT--ESGEFYNAMKEEMYMDVYGFGEIILEIL 879
+A+FG L T A FP I WT ES + K + DV+ FG ++ EI
Sbjct: 145 VADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN---KFSIKSDVWAFGVLLWEIA 199
Query: 880 TNGRLTNAGSSLQNKPIDGLLGEMYN-ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP 938
T G G L + LL + Y E G V ++ C + PSDRP
Sbjct: 200 TYGMSPYPGIDLSQ--VYELLEKGYRMERPEGCPPK-------VYELMRACWQWNPSDRP 250
Query: 939 SMEE 942
S E
Sbjct: 251 SFAE 254
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 75.6 bits (186), Expect = 7e-14
Identities = 36/92 (39%), Positives = 52/92 (56%)
Query: 250 LDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPI 309
L + L G IP ++S L L+S+ L N + G +P +T+L+ LDLS N +G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 310 PESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
PES L +LR+L+L N +SG VP +L
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGRL 514
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 74.9 bits (184), Expect = 9e-14
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 30/134 (22%)
Query: 65 WSGVKC----NKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVE 120
WSG C K + G+ L +GL G +P + L +NLS NS G P
Sbjct: 404 WSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISK--LRHLQSINLSGNSIRGNIPPS 461
Query: 121 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180
+ ++TSL LD+S N SF+GS+P + QL L++LNL
Sbjct: 462 LGSITSLEVLDLSYN------------------------SFNGSIPESLGQLTSLRILNL 497
Query: 181 AGSYFSGPIPSQFG 194
G+ SG +P+ G
Sbjct: 498 NGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 2e-13
Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 46/262 (17%)
Query: 716 ITVSVKKIEWGATRIKIVSEFITRIGTV----RHKNLIRLLGFCYNRHQAYLLYDYLPNG 771
+TV+VK ++ AT K +S+ ++ + + +HKN+I LLG C Y++ +Y G
Sbjct: 48 VTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 106
Query: 772 NLSEKIRTKRDWAAKYKIVLG------------------VARGLCFL-HHDCYPAIPHGD 812
NL E +R +R +Y + VARG+ +L C H D
Sbjct: 107 NLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCI----HRD 162
Query: 813 LKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMY 865
L A N++ EN +A+FG Y + +G P K W ++ +
Sbjct: 163 LAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVK--WMAPEALFDRVYTHQ- 219
Query: 866 MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925
DV+ FG ++ EI T G GS P++ L + + + ++ +E+ +++
Sbjct: 220 SDVWSFGVLMWEIFTLG-----GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 274
Query: 926 ALLCTRSTPSDRPSMEEALKLL 947
C + PS RP+ ++ ++ L
Sbjct: 275 ---CWHAIPSHRPTFKQLVEDL 293
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 1e-12
Identities = 69/266 (25%), Positives = 109/266 (40%), Gaps = 54/266 (20%)
Query: 716 ITVSVKKIEWGATR---IKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
TV+VK ++ AT +VSE + IG +HKN+I LLG C Y++ +Y +
Sbjct: 43 STVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGVCTQEGPLYVVVEYAAH 100
Query: 771 GNLSEKIRTKRDWAAKYKIVLG------------------VARGLCFLHHDCYPAIPHGD 812
GNL + +R +R VARG+ FL H D
Sbjct: 101 GNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRD 157
Query: 813 LKASNIVFDENMEPHLAEFGFK-------YLTQLADGSFPAKIAWTESGEFYNAMKEEMY 865
L A N++ E+ +A+FG Y + +G P K E A+ + +Y
Sbjct: 158 LAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPE------ALFDRVY 211
Query: 866 M---DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KL 921
DV+ FG ++ EI T G GS P++ L + + + E+ L
Sbjct: 212 THQSDVWSFGVLLWEIFTLG-----GSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHL 266
Query: 922 VLDVALLCTRSTPSDRPSMEEALKLL 947
+ D C PS RP+ ++ ++ L
Sbjct: 267 MRD----CWHEVPSQRPTFKQLVEDL 288
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 2e-12
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 47/274 (17%)
Query: 705 AAGCKAVLPTGIT-VSVKKIEWGATRIKIVSEFITRIGTVR----HKNLIRLLGFCYNRH 759
A G P +T V+VK ++ AT K +S+ I+ + ++ HKN+I LLG C
Sbjct: 39 AIGLDKEKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97
Query: 760 QAYLLYDYLPNGNLSEKIRTKRDWAAKY------------------KIVLGVARGLCFL- 800
Y++ +Y GNL E +R +R +Y VARG+ +L
Sbjct: 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA 157
Query: 801 HHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWTES 853
C H DL A N++ E+ +A+FG Y + +G P K W
Sbjct: 158 SKKCI----HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK--WMAP 211
Query: 854 GEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913
++ + DV+ FG ++ EI T G GS P++ L + + + S
Sbjct: 212 EALFDRIYTHQ-SDVWSFGVLLWEIFTLG-----GSPYPGVPVEELFKLLKEGHRMDKPS 265
Query: 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 947
+ +E+ +++ C + PS RP+ ++ ++ L
Sbjct: 266 NCTNELYMMMRD---CWHAVPSQRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 6e-12
Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 46/257 (17%)
Query: 716 ITVSVKKIEWGATRIKIVSEFITRIGTVR----HKNLIRLLGFCYNRHQAYLLYDYLPNG 771
+TV+VK ++ AT K +S+ ++ + ++ HKN+I LLG C Y+L +Y G
Sbjct: 45 VTVAVKMLKDDATD-KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKG 103
Query: 772 NLSEKIRTKRDWAAKYKI------------------VLGVARGLCFL-HHDCYPAIPHGD 812
NL E +R +R Y VARG+ +L C H D
Sbjct: 104 NLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCI----HRD 159
Query: 813 LKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMY 865
L A N++ E+ +A+FG Y + +G P K W ++ +
Sbjct: 160 LAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVK--WMAPEALFDRVYTHQ- 216
Query: 866 MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925
DV+ FG ++ EI T G GS P++ L + + + ++ E+ +++
Sbjct: 217 SDVWSFGVLLWEIFTLG-----GSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRE 271
Query: 926 ALLCTRSTPSDRPSMEE 942
C + PS RP+ ++
Sbjct: 272 ---CWHAVPSQRPTFKQ 285
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 5e-11
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 15/176 (8%)
Query: 718 VSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 777
V++K I GA + E + + H L++L G C R L+++++ +G LS+ +
Sbjct: 31 VAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYL 90
Query: 778 RTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834
R +R ++ ++ L V G+ +L + H DL A N + EN +++FG
Sbjct: 91 RAQRGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMT 147
Query: 835 YL------TQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 884
T FP K W+ S E ++ K DV+ FG ++ E+ + G+
Sbjct: 148 RFVLDDQYTSSTGTKFPVK--WS-SPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKT 200
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 8e-11
Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 52/265 (19%)
Query: 716 ITVSVKKIEWGATRIKIVSEFITRIGTV----RHKNLIRLLGFCYNRHQAYLLYDYLPNG 771
+TV+VK ++ AT K +++ I+ + + +HKN+I LLG C Y++ +Y G
Sbjct: 45 VTVAVKMLKDNATD-KDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKG 103
Query: 772 NLSEKIRTKRDWAAKYKI------------------VLGVARGLCFLH-HDCYPAIPHGD 812
NL E +R +R Y VARG+ +L C H D
Sbjct: 104 NLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCI----HRD 159
Query: 813 LKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMY 865
L A N++ E+ +A+FG Y + ++G P K E A+ + +Y
Sbjct: 160 LAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPE------ALFDRVY 213
Query: 866 M---DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922
DV+ FG ++ EI T G GS P++ L + + + S+ E+ ++
Sbjct: 214 THQSDVWSFGILMWEIFTLG-----GSPYPGIPVEELFKLLREGHRMDKPSNCTHELYML 268
Query: 923 LDVALLCTRSTPSDRPSMEEALKLL 947
+ C + P+ RP+ ++ ++ L
Sbjct: 269 MRE---CWHAVPTQRPTFKQLVEAL 290
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 1e-10
Identities = 32/80 (40%), Positives = 45/80 (56%)
Query: 163 GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT 222
G +P +IS+L HL+ +NL+G+ G IP GS SLE L L+ N N IP LG L +
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491
Query: 223 VTHMEIGYNFYQGNIPWQLG 242
+ + + N G +P LG
Sbjct: 492 LRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 2e-10
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 32/219 (14%)
Query: 742 TVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLG----VARGL 797
T+RH NL++LLG + Y++ +Y+ G+L + +R++ LG V G+
Sbjct: 56 TLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGM 115
Query: 798 CFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-KYLTQ-LADGSFPAKIAWT---- 851
+L H DL A N++ E++ +++FG K +Q G P K WT
Sbjct: 116 EYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVK--WTAPEA 170
Query: 852 -ESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910
+F DV+ FG ++ EI + GR+ L+ ++ E G
Sbjct: 171 LREKKFSTK------SDVWSFGILLWEIYSFGRVPYPRIPLK---------DVVPHVEKG 215
Query: 911 SSSSLQDEI-KLVLDVALLCTRSTPSDRPSMEEALKLLS 948
+ V V C P+ RP+ ++ + L+
Sbjct: 216 YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 7e-10
Identities = 63/237 (26%), Positives = 94/237 (39%), Gaps = 48/237 (20%)
Query: 735 EFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLG-- 792
E + ++G H N+I LLG C +R YL +Y P+GNL + +R R +
Sbjct: 59 EVLCKLG--HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 116
Query: 793 ----------------VARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF--- 833
VARG+ +L + H DL A NI+ EN +A+FG
Sbjct: 117 TASTLSSQQLLHFAADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRG 173
Query: 834 -KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ 892
+ + G P + ES N DV+ +G ++ EI+ SL
Sbjct: 174 QEVYVKKTMGRLPVRWMAIES---LNYSVYTTNSDVWSYGVLLWEIV----------SLG 220
Query: 893 NKPIDGLL-GEMYNENEVG----SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEAL 944
P G+ E+Y + G + DE V D+ C R P +RPS + L
Sbjct: 221 GTPYCGMTCAELYEKLPQGYRLEKPLNCDDE---VYDLMRQCWREKPYERPSFAQIL 274
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 2e-09
Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 36/240 (15%)
Query: 718 VSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 777
V+VK ++ G ++ E + T++H L+RL Y++ +Y+ G+L + +
Sbjct: 33 VAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFL 92
Query: 778 RTKR----------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
++ D++A+ +A G+ ++ Y H DL+A+N++ E++
Sbjct: 93 KSDEGGKVLLPKLIDFSAQ------IAEGMAYIERKNY---IHRDLRAANVLVSESLMCK 143
Query: 828 LAEFGFKYLTQLADGSFPAK------IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN 881
+A+FG + + D + A+ I WT + E N + DV+ FG ++ EI+T
Sbjct: 144 IADFGLARVIE--DNEYTAREGAKFPIKWT-APEAINFGSFTIKSDVWSFGILLYEIVTY 200
Query: 882 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 941
G++ G S N + L Y + + DE+ D+ C + +RP+ +
Sbjct: 201 GKIPYPGMS--NSDVMSALQRGYRMPRM---ENCPDEL---YDIMKTCWKEKAEERPTFD 252
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 4e-09
Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 284 QVPWE-----FSRVTT---LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 335
Q PW F + L L + L G IP + L++L+ ++L N + G +P
Sbjct: 401 QHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPP 460
Query: 336 SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLI 395
SL + SLE+L + N F+GS+PE+LG+ + LR ++++ N+ +G +P + GG L
Sbjct: 461 SLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL--GGRLLHRA 518
Query: 396 LFSNNFT 402
F NFT
Sbjct: 519 SF--NFT 523
|
Length = 623 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 4e-09
Identities = 53/240 (22%), Positives = 112/240 (46%), Gaps = 37/240 (15%)
Query: 718 VSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 777
V+VK ++ G+ ++ + T++H L++L + Y++ +++ G+L + +
Sbjct: 33 VAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFL 91
Query: 778 RTKR----------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
++ D++A+ +A G+ F+ Y H DL+A+NI+ ++
Sbjct: 92 KSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQRNYI---HRDLRAANILVSASLVCK 142
Query: 828 LAEFGFKYLTQLADGSFPAK------IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN 881
+A+FG + + D + A+ I WT + E N + DV+ FG +++EI+T
Sbjct: 143 IADFGLARVIE--DNEYTAREGAKFPIKWT-APEAINFGSFTIKSDVWSFGILLMEIVTY 199
Query: 882 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 941
GR+ G S N + L Y + + +E+ ++ + C ++ P +RP+ E
Sbjct: 200 GRIPYPGMS--NPEVIRALERGY---RMPRPENCPEEL---YNIMMRCWKNRPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 59.0 bits (141), Expect = 6e-09
Identities = 42/223 (18%), Positives = 74/223 (33%), Gaps = 27/223 (12%)
Query: 745 HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKY-----KIVLGVARGLCF 799
N+++L F + YL+ +Y+ G+L + ++ I+ + L +
Sbjct: 57 PPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEY 116
Query: 800 LHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLADGSFPAKIAWT------- 851
LH I H D+K NI+ D + L +FG L + +
Sbjct: 117 LHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPG 173
Query: 852 ----ESGEFYNAMKEEMYMDVYGFGEIILEILTN-----GRLTNAGSSLQNKPIDGLLGE 902
E + D++ G + E+LT G ++ +S K I L
Sbjct: 174 YMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP 233
Query: 903 MYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
S S+ + K D+ P +R S L
Sbjct: 234 SLASPL--SPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274
|
Length = 384 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 9e-09
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 209 LNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNL 268
L IP ++ L+ + + + N +GNIP LG+++ ++ LD++ + +GSIP+ L L
Sbjct: 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL 489
Query: 269 TKLESLFLFRNQLAGQVP 286
T L L L N L+G+VP
Sbjct: 490 TSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 1e-08
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 20/179 (11%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQA-YLLYDYLPNG 771
TG V+VK I+ T + E T + T + HKNL+RLLG H Y++ + + G
Sbjct: 28 TGQKVAVKNIKCDVTAQAFLEE--TAVMTKLHHKNLVRLLGVIL--HNGLYIVMELMSKG 83
Query: 772 NLSEKIRTKRDWAAK----YKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
NL +RT+ + L VA G+ +L + H DL A NI+ E+
Sbjct: 84 NLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAK 140
Query: 828 LAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM---DVYGFGEIILEILTNGR 883
+++FG + + + + WT A+K + + DV+ +G ++ E+ + GR
Sbjct: 141 VSDFGLARVGSMGVDNSKLPVKWTAP----EALKHKKFSSKSDVWSYGVLLWEVFSYGR 195
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 1e-08
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
+ V++K ++ G T R +SE + +G H N+IRL G A ++ +Y+ NG
Sbjct: 34 VAVAIKTLKPGYTEKQRQDFLSE-ASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGA 92
Query: 773 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
L + +R + Y++V G+A G+ +L Y H DL A NI+ + N+E ++
Sbjct: 93 LDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNY---VHRDLAARNILVNSNLECKVS 149
Query: 830 EFGF-KYLTQLADGSFPAK-----IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 882
+FG + L +G++ I WT + E K DV+ FG ++ E+++ G
Sbjct: 150 DFGLSRVLEDDPEGTYTTSGGKIPIRWT-APEAIAYRKFTSASDVWSFGIVMWEVMSFG 207
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 55.7 bits (134), Expect = 3e-08
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 19/192 (9%)
Query: 716 ITVSVKKIE--WGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773
I V++K I+ G + +++ + +G++ H ++RLLG C L+ P G+L
Sbjct: 37 IPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA-SLQLVTQLSPLGSL 95
Query: 774 SEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830
+ +R RD +++ + +A+G+ +L + H +L A NI+ + +A+
Sbjct: 96 LDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIAD 152
Query: 831 FGFKYLTQLADGSF-------PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGR 883
FG L D + P K ES F + DV+ +G + E+++ G
Sbjct: 153 FGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQS---DVWSYGVTVWEMMSYGA 209
Query: 884 LTNAGSSLQNKP 895
AG P
Sbjct: 210 EPYAGMRPHEVP 221
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 4e-08
Identities = 26/79 (32%), Positives = 48/79 (60%)
Query: 234 QGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVT 293
+G IP + + +Q ++++G ++ G+IP L ++T LE L L N G +P ++T
Sbjct: 431 RGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLT 490
Query: 294 TLKSLDLSDNRLSGPIPES 312
+L+ L+L+ N LSG +P +
Sbjct: 491 SLRILNLNGNSLSGRVPAA 509
|
Length = 623 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 4e-08
Identities = 61/252 (24%), Positives = 106/252 (42%), Gaps = 61/252 (24%)
Query: 718 VSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 777
V++K ++ G+ + + ++H L+RL + Y++ +Y+ NG+L + +
Sbjct: 33 VAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSLVDFL 91
Query: 778 RTKR----------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
+T D AA+ +A G+ F+ Y H DL+A+NI+ E +
Sbjct: 92 KTPEGIKLTINKLIDMAAQ------IAEGMAFIERKNYI---HRDLRAANILVSETLCCK 142
Query: 828 LAEFGFKYL------TQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN 881
+A+FG L T FP I WT + E N + DV+ FG ++ EI+T
Sbjct: 143 IADFGLARLIEDNEYTAREGAKFP--IKWT-APEAINYGTFTIKSDVWSFGILLTEIVTY 199
Query: 882 GRLTNAGSS----LQN--------KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929
GR+ G + +QN +P D E+Y ++ LC
Sbjct: 200 GRIPYPGMTNPEVIQNLERGYRMPRP-DNCPEELY-------------------ELMRLC 239
Query: 930 TRSTPSDRPSME 941
+ P +RP+ E
Sbjct: 240 WKEKPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 5e-08
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 39/250 (15%)
Query: 716 ITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE 775
I V++K I GA + E + + H L++L G C + Y++ +++ NG L
Sbjct: 29 IKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLN 88
Query: 776 KIRTKRDWAAKYKIVLGVARGLC----FLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 831
+R ++ +K ++L + + +C +L + + H DL A N + +++F
Sbjct: 89 YLRQRQGKLSK-DMLLSMCQDVCEGMEYLERNSF---IHRDLAARNCLVSSTGVVKVSDF 144
Query: 832 GF-KYL-----TQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLT 885
G +Y+ T + FP K W+ E +N K DV+ FG ++ E+ T G++
Sbjct: 145 GMTRYVLDDEYTSSSGAKFPVK--WS-PPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKM- 200
Query: 886 NAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-------KLVLDVALLCTRSTPSDRP 938
P E + EV S + V +V C P RP
Sbjct: 201 ---------PF-----EKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRP 246
Query: 939 SMEEALKLLS 948
+ E L+ ++
Sbjct: 247 TFAELLRAIT 256
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 5e-08
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 715 GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA-YLLYDYLPNGNL 773
G V+VK I+ AT ++E + + +RH NL++LLG Y++ +Y+ G+L
Sbjct: 29 GNKVAVKCIKNDATAQAFLAE-ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 87
Query: 774 SEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
+ +R++ K L V + +L + + H DL A N++ E+ ++
Sbjct: 88 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNF---VHRDLAARNVLVSEDNVAKVS 144
Query: 830 EFGF-KYLTQLAD-GSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNGRL 884
+FG K + D G P K WT A++E+ + DV+ FG ++ EI + GR+
Sbjct: 145 DFGLTKEASSTQDTGKLPVK--WTAP----EALREKKFSTKSDVWSFGILLWEIYSFGRV 198
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 6e-08
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 24/130 (18%)
Query: 350 NNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSL 409
N G +P ++ + L+ +++S N+ G+IPP + S L L L N+F GS+ SL
Sbjct: 427 NQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESL 486
Query: 410 SNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVS 469
+SL L L NS SG +P GG +++AS FN +
Sbjct: 487 GQLTSLRILNLNGNSLSGRVP-----------------AALGGRL--LHRAS----FNFT 523
Query: 470 NNPKLGGMIP 479
+N L G IP
Sbjct: 524 DNAGLCG-IP 532
|
Length = 623 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 7e-08
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 743 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLG----VARGLC 798
+RH LI+L C Y++ + + G+L E ++ A K ++ VA G+
Sbjct: 58 LRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMA 117
Query: 799 FLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL------TQLADGSFPAKIAWTE 852
+L Y H DL A N++ EN +A+FG + FP K WT
Sbjct: 118 YLEAQNYI---HRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIK--WT- 171
Query: 853 SGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912
+ E + + DV+ FG ++ EI+T GR+ G + N + + + Y +
Sbjct: 172 APEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPG--MTNAEVLQQVDQGY---RMPCP 226
Query: 913 SSLQDEIKLVLDVALLCTRSTPSDRPSME 941
E+ D+ L C + P DRP+ E
Sbjct: 227 PGCPKEL---YDIMLDCWKEDPDDRPTFE 252
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 8e-08
Identities = 70/247 (28%), Positives = 107/247 (43%), Gaps = 34/247 (13%)
Query: 714 TGITVSVKKIEWGATRIK-----IVSE--FITRIGTVRHKNLIRLLGFCYNR-HQAYLLY 765
T V++KK+ + + I+ E F+ RI +H N I G CY R H A+L+
Sbjct: 49 TNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI---KHPNSIEYKG-CYLREHTAWLVM 104
Query: 766 DYLPNGNLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
+Y G+ S+ + + + +I G +GL +LH + H D+KA NI+ E
Sbjct: 105 EYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTE 160
Query: 823 NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEIL 879
+ LA+FG + A+ SF W + E AM E Y +DV+ G +E
Sbjct: 161 PGQVKLADFGSASIASPAN-SFVGTPYWM-APEVILAMDEGQYDGKVDVWSLGITCIE-- 216
Query: 880 TNGRLTNAGSSLQN-KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP 938
L L N + L NE+ S+ D + +D C + P DRP
Sbjct: 217 ----LAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDS---CLQKIPQDRP 269
Query: 939 SMEEALK 945
+ EE LK
Sbjct: 270 TSEELLK 276
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 8e-08
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 46/221 (20%)
Query: 742 TVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR----------DWAAKYKIVL 791
+RH L++L C Y++ +Y+ G+L + +++ D AA+
Sbjct: 57 KLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQ----- 111
Query: 792 GVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK---- 847
+A G+ +L Y H DL A NI+ EN+ +A+FG L + D + A+
Sbjct: 112 -IAEGMAYLESRNY---IHRDLAARNILVGENLVCKIADFGLARL--IEDDEYTAREGAK 165
Query: 848 --IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLG-EMY 904
I WT + E N + + DV+ FG ++ EI+T GR+ P G+ E+
Sbjct: 166 FPIKWT-APEAANYGRFTIKSDVWSFGILLTEIVTYGRV----------PYPGMTNREVL 214
Query: 905 NENEVG----SSSSLQDEIKLVLDVALLCTRSTPSDRPSME 941
+ E G + +E+ D+ L C P +RP+ E
Sbjct: 215 EQVERGYRMPRPPNCPEELY---DLMLQCWDKDPEERPTFE 252
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 1e-07
Identities = 68/260 (26%), Positives = 104/260 (40%), Gaps = 44/260 (16%)
Query: 702 PQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRI-GTVRHKNLIRLLGFCYNRHQ 760
P + CK LP + +IK +SE RI H N+++L+G C R
Sbjct: 21 PVAVKTCKEDLPQEL------------KIKFLSE--ARILKQYDHPNIVKLIGVCTQRQP 66
Query: 761 AYLLYDYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLH-HDCYPAIPHGDLKAS 816
Y++ + +P G+ +R K+D ++V L A G+ +L +C H DL A
Sbjct: 67 IYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCI----HRDLAAR 122
Query: 817 NIVFDENMEPHLAEFGFKYLTQLADGSFPAK------IAWTESGEFYNAMKEEMYMDVYG 870
N + EN +++FG Q DG + + I WT + E N + DV+
Sbjct: 123 NCLVGENNVLKISDFGMS--RQEDDGIYSSSGLKQIPIKWT-APEALNYGRYSSESDVWS 179
Query: 871 FGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVG-SSSSLQDEIKLVLDVALL 928
+G ++ E SL P G+ + E E G S Q V V
Sbjct: 180 YGILLWETF----------SLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQR 229
Query: 929 CTRSTPSDRPSMEEALKLLS 948
C P +RP E K L+
Sbjct: 230 CWDYKPENRPKFSELQKELA 249
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 1e-07
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 43/218 (19%)
Query: 743 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR----------DWAAKYKIVLG 792
+RH+ L++L + Y++ +Y+ G+L + ++ + D AA+
Sbjct: 58 LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ------ 110
Query: 793 VARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK----- 847
+A G+ ++ Y H DL+A+NI+ EN+ +A+FG L + D + A+
Sbjct: 111 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIE--DNEYTARQGAKF 165
Query: 848 -IAWTE-SGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLG-EMY 904
I WT Y + + DV+ FG ++ E+ T GR+ P G++ E+
Sbjct: 166 PIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRV----------PYPGMVNREVL 213
Query: 905 NENEVGSSSSLQDEIKLVL-DVALLCTRSTPSDRPSME 941
++ E G E L D+ C R P +RP+ E
Sbjct: 214 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 1e-07
Identities = 64/240 (26%), Positives = 96/240 (40%), Gaps = 49/240 (20%)
Query: 735 EFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR------DWAAKY- 787
E + ++G H N+I LLG C +R YL +Y P+GNL + +R R +A
Sbjct: 47 EVLCKLG--HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 104
Query: 788 -----------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF--- 833
VARG+ +L + H DL A NI+ EN +A+FG
Sbjct: 105 TASTLSSQQLLHFAADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRG 161
Query: 834 -KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ 892
+ + G P + ES N DV+ +G ++ EI+ SL
Sbjct: 162 QEVYVKKTMGRLPVRWMAIES---LNYSVYTTNSDVWSYGVLLWEIV----------SLG 208
Query: 893 NKPIDGLL-GEMYNENEVG----SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEE-ALKL 946
P G+ E+Y + G + DE V D+ C R P +RPS + + L
Sbjct: 209 GTPYCGMTCAELYEKLPQGYRLEKPLNCDDE---VYDLMRQCWREKPYERPSFAQILVSL 265
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 48.7 bits (117), Expect = 1e-07
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 295 LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
LKSLDLS+NRL+ +F L NL++L L N ++ PE+ LPSL L + N
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 2e-07
Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 48/235 (20%)
Query: 735 EFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR------DWAAKY- 787
E + ++G H N+I LLG C NR Y+ +Y P GNL + +R R +A ++
Sbjct: 54 EVLCKLG--HHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHG 111
Query: 788 -----------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF--- 833
+ VA G+ +L + H DL A N++ EN+ +A+FG
Sbjct: 112 TASTLTSQQLLQFASDVATGMQYLSEKQF---IHRDLAARNVLVGENLASKIADFGLSRG 168
Query: 834 -KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ 892
+ + G P + ES N DV+ FG ++ EI+ SL
Sbjct: 169 EEVYVKKTMGRLPVRWMAIES---LNYSVYTTKSDVWSFGVLLWEIV----------SLG 215
Query: 893 NKPIDGLL-GEMYNENEVG----SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEE 942
P G+ E+Y + G + DE V ++ C R P +RP +
Sbjct: 216 GTPYCGMTCAELYEKLPQGYRMEKPRNCDDE---VYELMRQCWRDRPYERPPFAQ 267
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 56/232 (24%), Positives = 94/232 (40%), Gaps = 38/232 (16%)
Query: 730 IKIVS--------EFITRIGT---VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIR 778
IKI+ +F + +RHK+LI L C Y++ + + G+L +R
Sbjct: 35 IKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLR 94
Query: 779 TKRDWAAKYKIVLG----VARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834
+ ++ VA G+ +L H DL A NI+ E++ +A+FG
Sbjct: 95 SPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLA 151
Query: 835 -------YLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 887
YL+ D P K WT + E + DV+ FG ++ E+ T G++
Sbjct: 152 RLIKEDVYLSS--DKKIPYK--WT-APEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYP 206
Query: 888 GSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS 939
G + N + + Y + + EI ++ L C + P DRPS
Sbjct: 207 GMN--NHEVYDQITAGY---RMPCPAKCPQEIYKIM---LECWAAEPEDRPS 250
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 35/254 (13%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLL--YDYL 768
TG V+VK + + + S+F I +R H+N+++ G C L +YL
Sbjct: 32 TGEQVAVKSLN-HSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYL 90
Query: 769 PNGNLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
P+G+L + ++ RD +++L + +G+ +L Y H DL A NI+ +
Sbjct: 91 PSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYI---HRDLAARNILVESEDL 147
Query: 826 PHLAEFGF--------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILE 877
+++FG Y G P I W + E K DV+ FG + E
Sbjct: 148 VKISDFGLAKVLPEDKDYYYVKEPGESP--IFWY-APECLRTSKFSSASDVWSFGVTLYE 204
Query: 878 ILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL---------VLDVALL 928
+ T G + + + + I G+M + L++ +L V D+ L
Sbjct: 205 LFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL---ELLKEGERLPRPPSCPDEVYDLMKL 261
Query: 929 CTRSTPSDRPSMEE 942
C + P DRPS +
Sbjct: 262 CWEAEPQDRPSFAD 275
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 3e-07
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
I V++K ++ G++ R+ ++E + +G H N+IRL G ++ +Y+ NG+
Sbjct: 33 IDVAIKTLKAGSSDKQRLDFLTE-ASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGS 91
Query: 773 LSEKIRTKRD---WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
L + +R ++ G+A G+ +L Y H DL A NI+ + N+ ++
Sbjct: 92 LDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYV---HRDLAARNILVNSNLVCKVS 148
Query: 830 EFGFKYLTQLADGSFPAK-----IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 882
+FG + ++ ++ K I WT + E K DV+ FG ++ E+++ G
Sbjct: 149 DFGLSRRLEDSEATYTTKGGKIPIRWT-APEAIAYRKFTSASDVWSFGIVMWEVMSYG 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 4e-07
Identities = 75/258 (29%), Positives = 108/258 (41%), Gaps = 54/258 (20%)
Query: 714 TGITVSVKKIEWGATRIK-----IVSEFITRIGTVRHKNLIRLLGFCYNR-HQAYLLYDY 767
T V++KK+ + + I+ E + + +RH N I G CY R H A+L+ +Y
Sbjct: 39 TNEVVAIKKMSYSGKQSNEKWQDIIKE-VRFLQQLRHPNTIEYKG-CYLREHTAWLVMEY 96
Query: 768 LPNGNLSEKIRTKR------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
G+ S+ + + + AA I G +GL +LH H D+KA NI+
Sbjct: 97 CL-GSASDILEVHKKPLQEVEIAA---ICHGALQGLAYLHSHE---RIHRDIKAGNILLT 149
Query: 822 ENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEI 878
E LA+FG L A+ SF W + E AM E Y +DV+ G +E+
Sbjct: 150 EPGTVKLADFGSASLVSPAN-SFVGTPYWM-APEVILAMDEGQYDGKVDVWSLGITCIEL 207
Query: 879 ------LTNGRLTNAGSSL----QNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928
L N NA S+L QN SS+ D + +D
Sbjct: 208 AERKPPLFN---MNAMSALYHIAQNDS------------PTLSSNDWSDYFRNFVD---S 249
Query: 929 CTRSTPSDRPSMEEALKL 946
C + P DRPS EE LK
Sbjct: 250 CLQKIPQDRPSSEELLKH 267
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 4e-07
Identities = 67/236 (28%), Positives = 112/236 (47%), Gaps = 22/236 (9%)
Query: 96 LRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFS------GHFPGGIQSLR 149
L + +DLNL+ + E+ LT+L SLD+ NN + G
Sbjct: 90 LNLLPLPSLDLNLNRLRSN---ISELLELTNLTSLDLDNNNITDIPPLIGLLK------S 140
Query: 150 NLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLL 209
NL LD N S+P+ + L +LK L+L+ + S +P + +L L L+GN +
Sbjct: 141 NLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSD-LPKLLSNLSNLNNLDLSGNKI 198
Query: 210 NDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLT 269
+D +P E+ +L + +++ N + L N+ + L+++ N +P+ + NL+
Sbjct: 199 SD-LPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSN-NKLEDLPESIGNLS 255
Query: 270 KLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325
LE+L L NQ++ + S T L+ LDLS N LS +P L L LL +
Sbjct: 256 NLETLDLSNNQIS-SISSLGSL-TNLRELDLSGNSLSNALPLIALLLLLLELLLNL 309
|
Length = 394 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 5e-07
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 16/185 (8%)
Query: 709 KAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765
K VL V+VK + K + E + H N+++L+G C + Y++
Sbjct: 13 KGVLKGNTEVAVKTCRSTLPPDLKRKFLQE-AEILKQYDHPNIVKLIGVCVQKQPIYIVM 71
Query: 766 DYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
+ +P G+L +R K++ K++ L A G+ +L I H DL A N + E
Sbjct: 72 ELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN--CI-HRDLAARNCLVGE 128
Query: 823 NMEPHLAEFGFK-----YLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILE 877
N +++FG + ++DG I WT + E N + DV+ +G ++ E
Sbjct: 129 NNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWT-APEALNYGRYTSESDVWSYGILLWE 187
Query: 878 ILTNG 882
+ G
Sbjct: 188 TFSLG 192
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 6e-07
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 28/244 (11%)
Query: 714 TGITVSVKKIEWGATRIK-----IVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768
T V+VKK+ + + I+ E + + ++H N I G H A+L+ +Y
Sbjct: 45 TNEVVAVKKMSYSGKQTNEKWQDIIKE-VKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYC 103
Query: 769 PNGNLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
G+ S+ + + + +I G +GL +LH + H D+KA NI+ E +
Sbjct: 104 L-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQ 159
Query: 826 PHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNG 882
LA+FG + A+ SF W + E AM E Y +DV+ G +E
Sbjct: 160 VKLADFGSASKSSPAN-SFVGTPYWM-APEVILAMDEGQYDGKVDVWSLGITCIE----- 212
Query: 883 RLTNAGSSLQN-KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 941
L L N + L N++ S+ D + +D C + P +RP+
Sbjct: 213 -LAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVD---YCLQKIPQERPASA 268
Query: 942 EALK 945
E L+
Sbjct: 269 ELLR 272
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 1e-06
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 535 LERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDI 593
L+ +DL+NN+L LP L VLDLS N+L+ P F SL L++S N++
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 1e-06
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 20/180 (11%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
TG V++KK + + + V + R + +RH+N++ L + + YL+++Y+
Sbjct: 25 TGEIVAIKKFK-ESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVE 83
Query: 770 NGNLS--EKIRTKRDWAAKYKIVLGVARGLCFLH-HDCYPAIPHGDLKASNIVFDENMEP 826
L E A + + + + + H H+ I H D+K NI+ E+
Sbjct: 84 RTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN----IIHRDIKPENILVSESGVL 139
Query: 827 HLAEFGF-KYLTQLADGSFPAKIA--WTESGEFYNAMKEEMY---MDVYGFGEIILEILT 880
L +FGF + L +A W + E + + Y +DV+ G I+ E+L
Sbjct: 140 KLCDFGFARALRARPASPLTDYVATRWYRAPELL--VGDTNYGKPVDVWAIGCIMAELLD 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 2e-06
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 62/264 (23%)
Query: 720 VKKIEWGATR-IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL---------- 768
VKKI A R I+++ + RH+NL+ L+ + + YL+++++
Sbjct: 43 VKKI---AMREIRMLKQL-------RHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEK 92
Query: 769 -PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
PNG ++R K + + RG+ F H I H D+K NI+ ++
Sbjct: 93 YPNGLDESRVR---------KYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVK 140
Query: 828 LAEFGFKYLTQLADGSFPAKIA--WTESGEFYNAMKEEMY---MDVYGFGEIILEILTNG 882
L +FGF + +A W + E + + Y +D++ G ++ E+LT
Sbjct: 141 LCDFGFARTLAAPGEVYTDYVATRWYRAPELL--VGDTKYGRAVDIWAVGCLVTEMLTGE 198
Query: 883 RLTNAGSSL-QNKPIDGLLG-------EMYNENEVGSSSSLQD--EIK-----------L 921
L S + Q I LG E++ +N + + L + EI+ L
Sbjct: 199 PLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGL 258
Query: 922 VLDVALLCTRSTPSDRPSMEEALK 945
VLD+A C R P DRPS + L
Sbjct: 259 VLDLAKQCLRIDPDDRPSSSQLLH 282
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 3e-06
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 11/228 (4%)
Query: 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
+ L +L+LS N P + NL +L +LD+S N+ S P + +L NL LD N
Sbjct: 140 SNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNK 197
Query: 161 FSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGML 220
S +P EI L L+ L+L+ + + S + K+L L L+ N L D +P +G L
Sbjct: 198 IS-DLPPEIELLSALEELDLSNN-SIIELLSSLSNLKNLSGLELSNNKLED-LPESIGNL 254
Query: 221 KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ 280
+ +++ N Q + LG+++ ++ LD++G +LS ++P L LE L
Sbjct: 255 SNLETLDLSNN--QISSISSLGSLTNLRELDLSGNSLSNALPLIALLLLLLELLLNLLLT 312
Query: 281 LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNE 328
L E + L + ++ N + PE+ + L++L L + N
Sbjct: 313 LK---ALELKLNSILLNNNILSNGETS-SPEALSILESLNNLWTLDNA 356
|
Length = 394 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 3e-06
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 745 HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLC----FL 800
H NL++L G C + +++ +Y+ NG L +R ++ + +L + +C +L
Sbjct: 58 HPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGT-EWLLDMCSDVCEAMEYL 116
Query: 801 HHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-KYL-----TQLADGSFPAKIAWTESG 854
+ + H DL A N + E+ +++FG +Y+ T FP K W
Sbjct: 117 ESNGF---IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVK--WA-PP 170
Query: 855 EFYNAMKEEMYMDVYGFGEIILEILTNGRL 884
E ++ + DV+ FG ++ E+ + G++
Sbjct: 171 EVFDYSRFSSKSDVWSFGVLMWEVFSEGKM 200
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 4e-06
Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 44/260 (16%)
Query: 718 VSVKKIEWGATRIKIVSEFIT---RIGTVRHKNLIRLLGFCYNRHQA------YLLYDYL 768
V+VK ++ + EF++ + H N+++L+G C+ ++ ++
Sbjct: 30 VAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFM 89
Query: 769 PNGNL-SEKIRTKRDWAAKY-------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820
+G+L S + ++ + K ++ +A G+ +L + + H DL A N +
Sbjct: 90 KHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFI---HRDLAARNCML 146
Query: 821 DENMEPHLAEFGFK-------YLTQLADGSFPAKIAWTESGEFYNAMKEEMYM---DVYG 870
E+M +A+FG Y Q P K ES + + +Y DV+
Sbjct: 147 REDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES------LADRVYTSKSDVWA 200
Query: 871 FGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCT 930
FG + EI T G+ G ++N I L + N + DE + D+ C
Sbjct: 201 FGVTMWEIATRGQTPYPG--VENHEIYDYL---RHGNRLKQPEDCLDE---LYDLMYSCW 252
Query: 931 RSTPSDRPSMEEALKLLSGL 950
R+ P DRP+ + ++L +
Sbjct: 253 RADPKDRPTFTKLREVLENI 272
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 5e-06
Identities = 54/236 (22%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 718 VSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 777
V+VK ++ G + E + +RH L++L + Y++ +Y+ G+L + +
Sbjct: 33 VAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL 91
Query: 778 RTKRDWAAKY----KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833
+ A K + VA G+ ++ Y H DL+++NI+ + + +A+FG
Sbjct: 92 KDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI---HRDLRSANILVGDGLVCKIADFGL 148
Query: 834 KYLTQLADGSFPAK------IAWTE-SGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTN 886
L + D + A+ I WT Y + + DV+ FG ++ E++T GR+
Sbjct: 149 ARLIE--DNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELVTKGRVPY 204
Query: 887 AGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL-DVALLCTRSTPSDRPSME 941
G + N+ E+ + E G + + L ++ L C + P +RP+ E
Sbjct: 205 PG--MNNR-------EVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 6e-06
Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 59/260 (22%)
Query: 713 PTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
TG V++K I E + KI++E I + +H N+++ G + + +++ ++
Sbjct: 23 RTGKEVAIKVIKLESKEKKEKIINE-IQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81
Query: 771 GNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLH--HDCYPAIPHGDLKASNIVFDEN 823
G+L + +++ A + + +GL +LH I H D+KA+NI+ +
Sbjct: 82 GSLKDLLKSTNQTLTESQIAY--VCKELLKGLEYLHSNG-----IIHRDIKAANILLTSD 134
Query: 824 MEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA---MKEEMY---MDVYGFGEIILE 877
E L +FG QL+D + T ++ A + + Y D++ G +E
Sbjct: 135 GEVKLIDFGLS--AQLSDTKARNTMVGT---PYWMAPEVINGKPYDYKADIWSLGITAIE 189
Query: 878 ILTNGR------------LTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925
L G+ A GL S +D +K
Sbjct: 190 -LAEGKPPYSELPPMKALFKIA-----TNGPPGLRNPEKW------SDEFKDFLK----- 232
Query: 926 ALLCTRSTPSDRPSMEEALK 945
C + P RP+ E+ LK
Sbjct: 233 --KCLQKNPEKRPTAEQLLK 250
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 1e-05
Identities = 76/264 (28%), Positives = 107/264 (40%), Gaps = 34/264 (12%)
Query: 314 ADLKNLRLLSLMYNEM--SGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVD 371
+ L L L L+ S E+L+ L L L + N ++ E L + L +D
Sbjct: 64 SSLSRLLSLDLLSPSGISSLDGSENLLNLLPLPSLDLNLNRLRSNISE-LLELTNLTSLD 122
Query: 372 VSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPL 431
+ NN IPP I K + S+N SL L N +L L L N S ++P
Sbjct: 123 LDNNNIT-DIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLS-DLPK 180
Query: 432 KFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNF 491
S L ++N +DLS N + +P +I S LE ++SNN +
Sbjct: 181 LLSNLSNLNNLDLSGNKISD-LPPEIELLSALEELDLSNNSII----------------- 222
Query: 492 SASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPE 551
L S NN +PES+ N LE +DL+NN++ S
Sbjct: 223 ---------ELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQI--SSIS 271
Query: 552 VLARLPVLGVLDLSHNSLSGQIPA 575
L L L LDLS NSLS +P
Sbjct: 272 SLGSLTNLRELDLSGNSLSNALPL 295
|
Length = 394 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 1e-05
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Query: 744 RHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR----DWAAKY--KIVLGVARGL 797
H +I+L + Y + +Y PNG L + IR Y +I+L +
Sbjct: 60 GHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALE--- 116
Query: 798 CFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 832
+LH I H DLK NI+ D++M + +FG
Sbjct: 117 -YLHSK---GIIHRDLKPENILLDKDMHIKITDFG 147
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 1e-05
Identities = 60/260 (23%), Positives = 102/260 (39%), Gaps = 48/260 (18%)
Query: 714 TGITVSVKKIEW----GATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYD 766
TG ++VK++ + + + ++V I + H ++IR+LG L +
Sbjct: 24 TGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVE 83
Query: 767 YLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
++ G++S + K Y + RGL +LH + I H D+K +N++ D
Sbjct: 84 WMAGGSVSHLLSKYGAFKEAVIINY--TEQLLRGLSYLHEN---QIIHRDVKGANLLIDS 138
Query: 823 N-MEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM------------KEEMY---M 866
+A+FG A AK T +GEF + + E Y
Sbjct: 139 TGQRLRIADFG-------AAARLAAKG--TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSC 189
Query: 867 DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS-SSSLQDEIKLVLDV 925
DV+ G +I+E+ T + N L+ ++ + S L ++ DV
Sbjct: 190 DVWSVGCVIIEMAT-AKPPWNAEKHSNHL--ALIFKIASATTAPSIPEHLSPGLR---DV 243
Query: 926 ALLCTRSTPSDRPSMEEALK 945
L C P DRP E LK
Sbjct: 244 TLRCLELQPEDRPPSRELLK 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 2e-05
Identities = 63/241 (26%), Positives = 101/241 (41%), Gaps = 30/241 (12%)
Query: 718 VSVKKIEWGATRIK-----IVSEFITRIGTVRHKNLIRLLGFCYNR-HQAYLLYDYLPNG 771
V++KK+ + + I+ E + + +RH N I+ G CY R H A+L+ +Y G
Sbjct: 43 VAIKKMSYSGKQSNEKWQDIIKE-VRFLQKLRHPNTIQYRG-CYLREHTAWLVMEYCL-G 99
Query: 772 NLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828
+ S+ + + + +I G +GL +LH + H D+KA NI+ E L
Sbjct: 100 SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKL 156
Query: 829 AEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNGRLT 885
+FG + A+ F W + E AM E Y +DV+ G +T L
Sbjct: 157 GDFGSASIMAPAN-XFVGTPYWM-APEVILAMDEGQYDGKVDVWSLG------ITCIELA 208
Query: 886 NAGSSLQN-KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEAL 944
L N + L NE+ S + + +D C + P DRP+ E L
Sbjct: 209 ERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDS---CLQKIPQDRPTSEVLL 265
Query: 945 K 945
K
Sbjct: 266 K 266
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 2e-05
Identities = 59/253 (23%), Positives = 98/253 (38%), Gaps = 49/253 (19%)
Query: 716 ITVSVKKIEWGATRIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
I V+VK + GAT + EF+ + H N+++LLG C Y++ + + G+
Sbjct: 27 IRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGD 85
Query: 773 LSEKIRTKRDWAAKY-----------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
L +R R ++ I L VA+G +L + H DL A N +
Sbjct: 86 LLSYLRDAR--VERFGPPLLTLKELLDICLDVAKGCVYLEQMHF---IHRDLAARNCLVS 140
Query: 822 ENMEP-----HLAEFGF-------KYLTQLADGSFPAKIAWTES---GEFYNAMKEEMYM 866
E + +FG Y + +G P + ES G+F
Sbjct: 141 EKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKF------TTQS 194
Query: 867 DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926
DV+ FG ++ EILT G+ + Q +L + + + D+I +
Sbjct: 195 DVWSFGVLMWEILTLGQQPYPALNNQE-----VLQHVTAGGRLQKPENCPDKIY---QLM 246
Query: 927 LLCTRSTPSDRPS 939
C PS+RP+
Sbjct: 247 TNCWAQDPSERPT 259
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 2e-05
Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 41/253 (16%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIG---TVRHKNLIRLLGFCYNR-HQAYLLY-DYL 768
TG ++VK +E + + I +++H N++R G + ++ +Y+
Sbjct: 24 TGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYV 83
Query: 769 PNGNLSEKIRTKRDWAAKYKIVLGVAR----GLCFLH-HDCYPAIPHGDLKASNIVFDEN 823
G+LS + K+ ++ R GL +LH + I H D+K +NI+ D +
Sbjct: 84 SGGSLSSLL--KKFGKLPEPVIRKYTRQILEGLAYLHSNG----IVHRDIKGANILVDSD 137
Query: 824 MEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNA---MKEEMY---MDVYGFGEIIL 876
LA+FG K L + G + T ++ A ++ E Y D++ G ++
Sbjct: 138 GVVKLADFGCAKRLGDIETGEGTGSVRGT---PYWMAPEVIRGEEYGRAADIWSLGCTVI 194
Query: 877 EILTNGRLTNAGSSLQNKP---IDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRS 932
E+ T P + + +Y G + + + + D C R
Sbjct: 195 EMATGKP-----------PWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRR 243
Query: 933 TPSDRPSMEEALK 945
P RP+ +E L+
Sbjct: 244 DPKKRPTADELLQ 256
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.3 bits (111), Expect = 3e-05
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 24/132 (18%)
Query: 714 TGITVSVKKIEWG---------ATR-IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763
TG V++KKI A R I ++ E +H N+++LL + + YL
Sbjct: 23 TGEIVALKKIRLDNEEEGIPSTALREISLLKEL-------KHPNIVKLLDVIHTERKLYL 75
Query: 764 LYDYLPN--GNLSEKIRTKRDWAAKYK-IVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820
+++Y +K K I+ + RGL + H I H DLK NI+
Sbjct: 76 VFEYCDMDLKKYLDKRPGPLS-PNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILI 131
Query: 821 DENMEPHLAEFG 832
+ + LA+FG
Sbjct: 132 NRDGVLKLADFG 143
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 4e-05
Identities = 55/242 (22%), Positives = 105/242 (43%), Gaps = 41/242 (16%)
Query: 718 VSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE-- 775
V++K ++ G + + + +RH L+ L + Y++ +++ G+L +
Sbjct: 33 VAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVV-SEEPIYIVTEFMGKGSLLDFL 91
Query: 776 --------KIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
K+ D AA+ +A G+ ++ Y H DL+A+NI+ +N+
Sbjct: 92 KEGDGKYLKLPQLVDMAAQ------IADGMAYIERMNYI---HRDLRAANILVGDNLVCK 142
Query: 828 LAEFGFKYLTQLADGSFPAK------IAWTE-SGEFYNAMKEEMYMDVYGFGEIILEILT 880
+A+FG L + D + A+ I WT Y + + DV+ FG ++ E++T
Sbjct: 143 IADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELVT 198
Query: 881 NGRLTNAGSSLQNKPIDGLLGEMYN-ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS 939
GR+ G + N+ + + Y G SL + +K LC + P +RP+
Sbjct: 199 KGRVPYPG--MVNREVLEQVERGYRMPCPQGCPESLHELMK-------LCWKKDPDERPT 249
Query: 940 ME 941
E
Sbjct: 250 FE 251
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 4e-05
Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 46/260 (17%)
Query: 713 PTGITVSVKKIEWG----ATRIKIVSEF-ITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 765
G + K+I++G + ++VSE I R ++H N++R +R Y++
Sbjct: 23 SDGKILVWKEIDYGNMTEKEKQQLVSEVNILR--ELKHPNIVRYYDRIIDRSNQTLYIVM 80
Query: 766 DYLPNGNLSEKI-RTKRDWAAKY---KIVLGVARGLCFLHHDCY------PAIPHGDLKA 815
+Y G+L++ I + K++ KY + + + L ++C+ + H DLK
Sbjct: 81 EYCEGGDLAQLIQKCKKE--RKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKP 138
Query: 816 SNIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGF 871
+NI D N L +FG K L D SF T S E N M + D++
Sbjct: 139 ANIFLDANNNVKLGDFGLAKILGH--DSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSL 196
Query: 872 GEIILEILT-----NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926
G +I E+ R L +K +G + SS L + IK +L+V
Sbjct: 197 GCLIYELCALSPPFTAR-NQL--QLASKIKEG----KFRRIPYRYSSELNEVIKSMLNV- 248
Query: 927 LLCTRSTPSDRPSMEEALKL 946
P RPS EE L+L
Sbjct: 249 ------DPDKRPSTEELLQL 262
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 5e-05
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 16/200 (8%)
Query: 714 TGITVSVKKI----EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDY 767
+G V++KK+ E I + E IT + +RH N++ L +H +L+ +Y
Sbjct: 31 SGEIVALKKVRMDNERDGIPISSLRE-ITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEY 89
Query: 768 LPN--GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
+L + + T + ++L + RGL +LH + I H DLK SN++ +
Sbjct: 90 CEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGC 146
Query: 826 PHLAEFGFKYLTQLADGSFPAKIA--WTESGEFYNAMKEE-MYMDVYGFGEIILEILTNG 882
+A+FG L K+ W + E +D++ G I+ E+L +
Sbjct: 147 LKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHK 206
Query: 883 RLTNAGSSL-QNKPIDGLLG 901
L S + Q I LLG
Sbjct: 207 PLLPGKSEIEQLDLIIQLLG 226
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 5e-05
Identities = 57/236 (24%), Positives = 87/236 (36%), Gaps = 69/236 (29%)
Query: 745 HKNLIRLLGFC-----------------YNRH---QAYLLYD-------YLPNGNLSEKI 777
H N++RL+G C + +H ++LLY YLP L
Sbjct: 59 HPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQML---- 114
Query: 778 RTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK--- 834
K + +A G+ +L + H DL A N + +ENM +A+FG
Sbjct: 115 ---------VKFMTDIASGMEYLSSKSFI---HRDLAARNCMLNENMNVCVADFGLSKKI 162
Query: 835 ----YLTQLADGSFPAKIAWTESGEFYNAMKEEMYM---DVYGFGEIILEILTNGRLTNA 887
Y Q P K ES + + +Y DV+ FG + EI T G+
Sbjct: 163 YNGDYYRQGRIAKMPVKWIAIES------LADRVYTTKSDVWSFGVTMWEIATRGQTPYP 216
Query: 888 GSSLQNKPIDGLLGEMYNENEVGSS-SSLQDEIKLVLDVALLCTRSTPSDRPSMEE 942
G ++N E+Y+ G+ D + + + C P DRPS E
Sbjct: 217 G--VENS-------EIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFET 263
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 6e-05
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 728 TRIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYL-LYDYLPNGNLSEKIRT-KRD 782
T ++ V +F+ + H N++ LLG C + L + Y+ +G+L IR+ +
Sbjct: 35 TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHN 94
Query: 783 WAAKYKIVLG--VARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG-------- 832
K I G VA+G+ +L + H DL A N + DE+ +A+FG
Sbjct: 95 PTVKDLIGFGLQVAKGMEYLASKKFV---HRDLAARNCMLDESFTVKVADFGLARDIYDK 151
Query: 833 -FKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 882
+ + P K ES + K DV+ FG ++ E++T G
Sbjct: 152 EYYSVHNHTGAKLPVKWMALESLQTQ---KFTTKSDVWSFGVLLWELMTRG 199
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 7e-05
Identities = 53/246 (21%), Positives = 93/246 (37%), Gaps = 29/246 (11%)
Query: 713 PTGITVSVKKI---EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
PTG ++KKI R +++ E T +++ G Y + ++ +Y+
Sbjct: 24 PTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISIVLEYMD 82
Query: 770 NGNLSEKIRTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
G+L++ ++ I + +GL +LH + I H D+K SN++ + E
Sbjct: 83 GGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKPSNLLINSKGEVK 140
Query: 828 LAEFGF-KYLTQLADG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGR- 883
+A+FG K L D +F + + S E D++ G +LE G+
Sbjct: 141 IADFGISKVLENTLDQCNTFVGTVTYM-SPERIQGESYSYAADIWSLGLTLLECAL-GKF 198
Query: 884 -LTNAGSSLQNKPIDGLL----GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP 938
G Q + + G + S +D I C + P RP
Sbjct: 199 PFLPPG---QPSFFELMQAICDGPPPSLPAEEFSPEFRDFIS-------ACLQKDPKKRP 248
Query: 939 SMEEAL 944
S E L
Sbjct: 249 SAAELL 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 7e-05
Identities = 63/229 (27%), Positives = 92/229 (40%), Gaps = 51/229 (22%)
Query: 745 HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIR-----------TKRDWAAKY------ 787
H N+++LLG C LL++Y+ G+L+E +R A K
Sbjct: 67 HPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLP 126
Query: 788 -------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK---YLT 837
I VA G+ +L + H DL N + ENM +A+FG Y
Sbjct: 127 LSCTEQLCIAKQVAAGMAYLSERKFV---HRDLATRNCLVGENMVVKIADFGLSRNIYSA 183
Query: 838 QL--ADGSFPAKIAWT--ESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 893
A + I W ES FYN E DV+ +G ++ EI + G +Q
Sbjct: 184 DYYKASENDAIPIRWMPPES-IFYNRYTTE--SDVWAYGVVLWEIFSYG--------MQ- 231
Query: 894 KPIDGLLGE--MYNENEVGSSSSLQDEIKL-VLDVALLCTRSTPSDRPS 939
P G+ E +Y + G+ S D L + ++ LC PSDRPS
Sbjct: 232 -PYYGMAHEEVIYYVRD-GNVLSCPDNCPLELYNLMRLCWSKLPSDRPS 278
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 1e-04
Identities = 53/222 (23%), Positives = 84/222 (37%), Gaps = 35/222 (15%)
Query: 405 LSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPD-------INYIDLSRNGFTGGIPT-- 455
L+ +L SL L L N +G IP L + +DLS N
Sbjct: 43 LASALRPQPSLKELCLSLN-ETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVL 101
Query: 456 -DINQASKLEYFNVSNNP--KLGGMIPAQ--TWSLPSLQNFSASACNITGN-----LPPF 505
+ ++S L+ ++NN G + A+ P+L+ + G
Sbjct: 102 ESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161
Query: 506 KSCKSISVIESHMNNLSG-----TIPESVSNCVELERIDLANNKL----IGSIPEVLARL 556
++ + + + N + +NC LE +DL NN L ++ E LA L
Sbjct: 162 RANRDLKELNLANNGIGDAGIRALAEGLKANC-NLEVLDLNNNGLTDEGASALAETLASL 220
Query: 557 PVLGVLDLSHNSLSGQIPAKFGS-----CSSLTVLNVSFNDI 593
L VL+L N+L+ A S SL L++S NDI
Sbjct: 221 KSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDI 262
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 1e-04
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 43/143 (30%)
Query: 714 TGITVSVKKIEWG------------ATR-IKIVSEFITRIGTVRHKNLIRLLG-FCYNRH 759
TG V++KKI+ G A R IK++ E +H N+I LL F + +
Sbjct: 24 TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-------KHPNIIGLLDVFGHKSN 76
Query: 760 QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVA----------RGLCFLHHDCYPAIP 809
L+++++ +L + I+ K IVL A RGL +LH + I
Sbjct: 77 -INLVFEFME-TDLEKVIKDK-------SIVLTPADIKSYMLMTLRGLEYLH-SNW--IL 124
Query: 810 HGDLKASNIVFDENMEPHLAEFG 832
H DLK +N++ + LA+FG
Sbjct: 125 HRDLKPNNLLIASDGVLKLADFG 147
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 1e-04
Identities = 62/275 (22%), Positives = 102/275 (37%), Gaps = 64/275 (23%)
Query: 705 AAGCKAVLPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762
AA C LP V++K+I E T + + + + + H N+++ + +
Sbjct: 19 AAIC---LPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELW 75
Query: 763 LLYDYLPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASN 817
L+ YL G+L + +++ D A ++ V +GL +LH + H D+KA N
Sbjct: 76 LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGN 132
Query: 818 IVFDENMEPHLAEFG-----FKY--LTQLADGSFPAKIAWT-----ESGEFYNAMKEEMY 865
I+ E+ +A+FG T+ +F W E Y+
Sbjct: 133 ILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFK----- 187
Query: 866 MDVYGFGEIILEILTNGR---------------LTNAGSSLQNKPIDGLLGEMYNENEVG 910
D++ FG +E L G L N SL+ +
Sbjct: 188 ADIWSFGITAIE-LATGAAPYSKYPPMKVLMLTLQNDPPSLE-----------TGADYKK 235
Query: 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
S S + I LC + PS RP+ EE LK
Sbjct: 236 YSKSFRKMIS-------LCLQKDPSKRPTAEELLK 263
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 1e-04
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 23/183 (12%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
I V++K ++ G T R +SE + +G H N+I L G ++ +++ NG
Sbjct: 33 IFVAIKTLKSGYTEKQRRDFLSE-ASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGA 91
Query: 773 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
L +R ++V G+A G+ +L Y H DL A NI+ + N+ ++
Sbjct: 92 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNY---VHRDLAARNILVNSNLVCKVS 148
Query: 830 EFGF-KYL---------TQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEIL 879
+FG ++L T G P I WT + E K DV+ +G ++ E++
Sbjct: 149 DFGLSRFLEDDTSDPTYTSSLGGKIP--IRWT-APEAIAYRKFTSASDVWSYGIVMWEVM 205
Query: 880 TNG 882
+ G
Sbjct: 206 SYG 208
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 2e-04
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 740 IGTVRHKNLIRLLGFCYN-RHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIV---LGVAR 795
+ +V H +++RLLG C + + Q L+ +P G L + +R +D ++ + +A+
Sbjct: 63 MASVDHPHVVRLLGICLSSQVQ--LITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAK 120
Query: 796 GLCFL--HHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK-----I 848
G+ +L + H DL A N++ + +FG L + + + A+ I
Sbjct: 121 GMSYLEEKR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPI 175
Query: 849 AWT--ES---GEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 888
W ES + + DV+ +G + E++T G G
Sbjct: 176 KWMALESILHRIYTHK------SDVWSYGVTVWELMTFGAKPYEG 214
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 2e-04
Identities = 58/233 (24%), Positives = 84/233 (36%), Gaps = 60/233 (25%)
Query: 744 RHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLH 801
+H NL++ G +R + Y+ +Y G L E + R D L + GL +LH
Sbjct: 57 KHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLH 116
Query: 802 HDCYPAIPHGDLKASNIVFDENMEPHLAEFG-FKYLTQLADGSFPAKIAWTESGEFYNAM 860
I H D+K +NI D N L +FG L T E +
Sbjct: 117 SH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT---------TMGEEVQSLA 164
Query: 861 KEEMYM-----------------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGE- 902
YM D++ G ++LE+ T G+ +P L E
Sbjct: 165 GTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMAT-GK----------RPWSELDNEF 213
Query: 903 --MYNENEVGS--------SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
M++ VG+ S L E K LD C S P RP+ E L+
Sbjct: 214 QIMFH---VGAGHKPPIPDSLQLSPEGKDFLD---RCLESDPKKRPTASELLQ 260
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 2e-04
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 718 VSVKKIEWGATRIKIVSEFITRIGT---VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774
V++K I+ G+ EFI + H+ L++L G C + Y++ +Y+ NG L
Sbjct: 31 VAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLL 87
Query: 775 EKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 831
+R + ++ V G+ +L + H DL A N + D+ +++F
Sbjct: 88 NYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQF---IHRDLAARNCLVDDQGCVKVSDF 144
Query: 832 GF-KYL-----TQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 884
G +Y+ T FP + W+ E K DV+ FG ++ E+ + G++
Sbjct: 145 GLSRYVLDDEYTSSVGSKFPVR--WSPP-EVLLYSKFSSKSDVWAFGVLMWEVYSLGKM 200
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYDYLPN 770
TG V++KKI + S I I ++ H N+++LL + ++ YL++++
Sbjct: 24 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF--- 80
Query: 771 GNLSEKIRTKRDWAAKYKIVLGVAR--------GLCFLHHDCYPAIPHGDLKASNIVFDE 822
L + ++ D + I L + + GL F H + H DLK N++ +
Sbjct: 81 --LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINT 135
Query: 823 NMEPHLAEFG 832
LA+FG
Sbjct: 136 EGAIKLADFG 145
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-04
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 24/132 (18%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI-------GTVRHKNLIRLLGFCYNRHQAYLLYD 766
TG V++K+I KI E + I ++H N+++ +G Y++ +
Sbjct: 24 TGDFVAIKQIS----LEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79
Query: 767 YLPNGNLSEKIRTKR------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820
Y NG+L + I K+ A Y V V +GL +LH + H D+KA+NI+
Sbjct: 80 YAENGSLRQII--KKFGPFPESLVAVY--VYQVLQGLAYLHEQ---GVIHRDIKAANILT 132
Query: 821 DENMEPHLAEFG 832
++ LA+FG
Sbjct: 133 TKDGVVKLADFG 144
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 39.4 bits (93), Expect = 3e-04
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 270 KLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327
L+SL L N+L +P F + LK LDLS N L+ PE+F+ L +LR L L N
Sbjct: 1 NLKSLDLSNNRLTV-IPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGN 58
|
Length = 60 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 3e-04
Identities = 59/277 (21%), Positives = 106/277 (38%), Gaps = 55/277 (19%)
Query: 712 LPTGITVSVKKIEWGATRIK---IVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768
TV+VK ++ A+ + ++SEF + V H ++I+L G C L+ +Y
Sbjct: 27 RAGYTTVAVKMLKENASSSELRDLLSEF-NLLKQVNHPHVIKLYGACSQDGPLLLIVEYA 85
Query: 769 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIP------------------- 809
G+L +R R Y + R +L + A+
Sbjct: 86 KYGSLRSFLRESRKVGPSY-LGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA 144
Query: 810 -----HGDLKASNIVFDENMEPHLAEFGFK--------YLTQLADGSFPAKIAWTESGEF 856
H DL A N++ E + +++FG Y+ + + G P K ES
Sbjct: 145 EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKR-SKGRIPVKWMAIES--- 200
Query: 857 YNAMKEEMYM---DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913
+ + +Y DV+ FG ++ EI+T G G + + + LL Y + S
Sbjct: 201 ---LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER--LFNLLKTGYRMERPENCS 255
Query: 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950
+ + ++ L C + P RP+ + K L +
Sbjct: 256 ------EEMYNLMLTCWKQEPDKRPTFADISKELEKM 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 3e-04
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 41/257 (15%)
Query: 714 TGITVSVKKIEW-GATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYDYLPN 770
TG V+VKK++ A ++ I + +++H N+++ G CY+ R L+ +YLP
Sbjct: 32 TGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPY 91
Query: 771 GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDC----YPAIP---HGDLKASNIVFDEN 823
G+L RD+ K++ L + L + C Y H DL NI+ +
Sbjct: 92 GSL-------RDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESE 144
Query: 824 MEPHLAEFGF-KYLTQLAD-------GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEII 875
+ +FG K L Q + G P I W + E K + DV+ FG ++
Sbjct: 145 NRVKIGDFGLTKVLPQDKEYYKVREPGESP--IFWY-APESLTESKFSVASDVWSFGVVL 201
Query: 876 LEILTNGR---------LTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQDEIKLVLDV 925
E+ T + G+ Q + I L E+ N + + EI ++
Sbjct: 202 YELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIM-- 259
Query: 926 ALLCTRSTPSDRPSMEE 942
C + PS RPS E
Sbjct: 260 -KECWNNDPSQRPSFSE 275
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 3e-04
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 21/137 (15%)
Query: 762 YLLYDYLPNGNLSEKIRT----KRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKA 815
YL+ +YL G+ + I+T DWA +Y ++VLGV LH I H D+K
Sbjct: 73 YLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVE----DLHQR---GIIHRDIKP 125
Query: 816 SNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFG 872
N++ D+ L +FG G K T + E + ++ D + G
Sbjct: 126 ENLLIDQTGHLKLTDFGLSRN-----GLENKKFVGTPDYLAPETILGVGDDKMSDWWSLG 180
Query: 873 EIILEILTNGRLTNAGS 889
+I E L +A +
Sbjct: 181 CVIFEFLFGYPPFHAET 197
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 4e-04
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 9/206 (4%)
Query: 260 SIPKELSNLT-KLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKN 318
IP + L L+ L L N++ +P + LK+LDLS N LS +P+ ++L N
Sbjct: 130 DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSD-LPKLLSNLSN 187
Query: 319 LRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 378
L L L N++S +P + L +LE L + NN L +L L +++S N
Sbjct: 188 LNNLDLSGNKIS-DLPPEIELLSALEELDLSNN-SIIELLSSLSNLKNLSGLELSNNKLE 245
Query: 379 GSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFS-QLP 437
P+ + + SNN S+S SL + ++L L L NS S +PL L
Sbjct: 246 D--LPESIGNLSNLETLDLSNNQISSIS-SLGSLTNLRELDLSGNSLSNALPLIALLLLL 302
Query: 438 DINYIDLSRNGFTGGIPTDINQASKL 463
++L + + +
Sbjct: 303 LELLLNLLLTLKALELKLNSILLNNN 328
|
Length = 394 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 4e-04
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 35/167 (20%)
Query: 743 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE------------------KIRTKRDWA 784
++H N++ LLG C +L++YL +G+L E +++ D +
Sbjct: 65 LQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCS 124
Query: 785 AKYKIVLGVARGLCFL--HHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-------KY 835
I + +A G+ +L HH H DL A N + E + +++FG Y
Sbjct: 125 DFLHIAIQIAAGMEYLSSHHFV-----HRDLAARNCLVGEGLTVKISDFGLSRDIYSADY 179
Query: 836 LTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 882
+ P + E+ + E D++ FG ++ EI + G
Sbjct: 180 YRVQSKSLLPVRWMPPEAILYGKFTTES---DIWSFGVVLWEIFSYG 223
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 4e-04
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 713 PTGITVSVKKIEWGATRIKIVSEFITRI-------GTVRHKNLIRLLGFCYNRHQAYLLY 765
PTG ++VK I R++I +I ++ G YN +
Sbjct: 24 PTGKIMAVKTI-----RLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78
Query: 766 DYLPNGNLSEKIRTKRDWAAKY---KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
+Y+ G+L + ++ + + KI + V +GL +LH I H D+K SNI+ +
Sbjct: 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH--KIIHRDVKPSNILVNS 136
Query: 823 NMEPHLAEFG 832
+ L +FG
Sbjct: 137 RGQIKLCDFG 146
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 56/240 (23%), Positives = 92/240 (38%), Gaps = 60/240 (25%)
Query: 741 GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYK-----------I 789
+ HKN++RLLG C Y++ +Y G+L + +R + K K +
Sbjct: 63 RKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVAL 122
Query: 790 VLGVARGLCFLHHDCYPAIPHGDLKASN-IVFDENM----------EPHLAEFGFKYLTQ 838
+A G+ L + + H DL A N +V + + + +E+ +K
Sbjct: 123 CTQIALGMDHLSNARF---VHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEY-YKLRNA 178
Query: 839 LADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNGRLTNAGSS----- 890
L + W A++E+ + DV+ FG ++ E+ T G L G S
Sbjct: 179 L------IPLRWLA----PEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVL 228
Query: 891 --LQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948
LQ ++ + E G S L KL+ C P DRPS E + L
Sbjct: 229 NRLQAGKLELPVPE-------GCPSRLY---KLMTR----CWAVNPKDRPSFSELVSALG 274
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 5e-04
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 418 LRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGM 477
L L++ G IP S+L + I+LS N G IP + + LE ++S N G
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYN-SFNGS 481
Query: 478 IPAQTWSLPSLQNFSASACNITGNLP 503
IP L SL+ + + +++G +P
Sbjct: 482 IPESLGQLTSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 6e-04
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 29/202 (14%)
Query: 712 LPTGITVSVK---KIEWGATRIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYLLY 765
+P G TV + KI T K EF+ + ++ H +L+RLLG C + L+
Sbjct: 29 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVT 87
Query: 766 DYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
+P+G L + + +D ++ + +A+G+ +L + H DL A N++
Sbjct: 88 QLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKS 144
Query: 823 NMEPHLAEFGFKYLTQLADGSFPAK-----IAWTESGEFYNAMKEEMYMDVYGFGEIILE 877
+ +FG L + + + A I W + E + K DV+ +G I E
Sbjct: 145 PNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM-ALECIHYRKFTHQSDVWSYGVTIWE 203
Query: 878 ILTNGRLTNAGSSLQNKPIDGL 899
++T G KP DG+
Sbjct: 204 LMTFG----------GKPYDGI 215
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 6e-04
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 41/191 (21%)
Query: 714 TGITVSVKKI------EWGATR----IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763
TG V++KKI E IK++ E H N+I+LL ++ YL
Sbjct: 23 TGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-------NHPNIIKLLDVFRHKGDLYL 75
Query: 764 LYDYLPNGNLSEKIRTKRDWAAKYKI---VLGVARGLCFLH-HDCYPAIPHGDLKASNIV 819
+++++ + +L + I+ ++ + I + + +GL F H H H DLK N++
Sbjct: 76 VFEFM-DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGIL----HRDLKPENLL 130
Query: 820 FDENMEPHLAEFGFKYLTQLADGSFPAKIAWTE--SGEFYNA----MKEEMY---MDVYG 870
+ LA+FG L + +T +Y A + ++ Y +D++
Sbjct: 131 INTEGVLKLADFG---LARSFGSPVR---PYTHYVVTRWYRAPELLLGDKGYSTPVDIWS 184
Query: 871 FGEIILEILTN 881
G I E+L+
Sbjct: 185 VGCIFAELLSR 195
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 7e-04
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 8/44 (18%)
Query: 29 EALLSLKSELVDD-FNSLHDWFVPPGVNPAGKIYACSWSGVKCN 71
+ALL+ KS L D +L W P +P CSW+GV C+
Sbjct: 6 DALLAFKSSLNGDPSGALSSW-NPSSSDP------CSWTGVTCD 42
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 7e-04
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 31/186 (16%)
Query: 716 ITVSVKKIEWGATRIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
I V++K ++ G T K +F++ +G H N+I L G ++ +Y+ NG+
Sbjct: 33 IPVAIKTLKAGYTE-KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGS 91
Query: 773 LSEKIRTKRDWAAKYKIVL------GVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826
L +R K D ++ ++ G+A G+ +L Y H DL A NI+ + N+
Sbjct: 92 LDAFLR-KHD--GQFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILVNSNLVC 145
Query: 827 HLAEFGFK----------YLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIIL 876
+++FG Y T+ G P I WT + E K DV+ +G ++
Sbjct: 146 KVSDFGLSRVLEDDPEAAYTTR--GGKIP--IRWT-APEAIAYRKFTSASDVWSYGIVMW 200
Query: 877 EILTNG 882
E+++ G
Sbjct: 201 EVMSYG 206
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.001
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Query: 745 HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLH 801
H N++RL+G C + Y++ + + G+ +RT + ++V A G+ +L
Sbjct: 52 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLE 111
Query: 802 HDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK-------IAWTESG 854
H DL A N + E +++FG + DG + + + WT +
Sbjct: 112 SKH---CIHRDLAARNCLVTEKNVLKISDFGMS--REEEDGVYASTGGMKQIPVKWT-AP 165
Query: 855 EFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ 892
E N + DV+ FG ++ E + G + A S Q
Sbjct: 166 EALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ 203
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 37.1 bits (87), Expect = 0.002
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 519 NNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSL 569
N L+ + L+ +DL+ N L PE + LP L LDLS N+L
Sbjct: 10 NRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.002
Identities = 53/228 (23%), Positives = 87/228 (38%), Gaps = 57/228 (25%)
Query: 743 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVAR----GLC 798
++H N+++ LG Y+ + +P G+L++ + K+ + ++ R GL
Sbjct: 59 LQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLL--KKYGSFPEPVIRLYTRQILLGLE 116
Query: 799 FLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-KYLTQLADG-SFPAKIAWTESGEF 856
+LH H D+K +NI+ D N LA+FG K + + + SF W
Sbjct: 117 YLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYW------ 167
Query: 857 YNAMKEEMYM---------DVYGFGEIILEILTN----------GRLTNAGSSLQNKPID 897
M E+ D++ G +LE+ T + G S + PI
Sbjct: 168 ---MAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPI- 223
Query: 898 GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
L DE K D L C + PS RP+ E L+
Sbjct: 224 --------------PDHLSDEAK---DFILKCLQRDPSLRPTAAELLE 254
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.002
Identities = 49/246 (19%), Positives = 89/246 (36%), Gaps = 71/246 (28%)
Query: 742 TVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAK--------------- 786
+H+N+++ G C ++++Y+ +G+L++ +R+ AA
Sbjct: 64 NFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQ 123
Query: 787 -YKIVLGVARGLCFL--HHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK---YLTQL- 839
+I + +A G+ +L H H DL N + ++ + +FG Y T
Sbjct: 124 LLQIAVQIASGMVYLASQH-----FVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYY 178
Query: 840 -ADGSFPAKIAWTESGEFYNAMKEEMYM--------DVYGFGEIILEILTNGRLTNAGSS 890
G I W M E M DV+ FG ++ EI T G+
Sbjct: 179 RVGGHTMLPIRW---------MPPESIMYRKFTTESDVWSFGVVLWEIFTYGK------- 222
Query: 891 LQNKPIDGLLGEMYNENEVGSSSSLQDEIKL---------VLDVALLCTRSTPSDRPSME 941
+P G + EV + L V D+ L C + P R +++
Sbjct: 223 ---QPWYG-----LSNEEV--IECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIK 272
Query: 942 EALKLL 947
+ + L
Sbjct: 273 DIHERL 278
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.003
Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLG-FCYNRHQAYLLYDYLPNGN 772
TG V++KK+ +++ I + +H N++ + +++ +Y+ G+
Sbjct: 43 TGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDE-LWVVMEYMDGGS 101
Query: 773 LSEKIR------TKRDWAAKYKIVLGVARGLCFLH--HDCYPAIPHGDLKASNIVFDENM 824
L++ I + A + V +GL +LH + + H D+K+ NI+ ++
Sbjct: 102 LTDIITQNFVRMNEPQIAY---VCREVLQGLEYLHSQN-----VIHRDIKSDNILLSKDG 153
Query: 825 EPHLAEFGF 833
LA+FGF
Sbjct: 154 SVKLADFGF 162
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.003
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 708 CKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766
KA+ TG V++K + +I+ E I+ + +++ G + +++ +
Sbjct: 20 YKAIHKETGQVVAIKVVPVEEDLQEIIKE-ISILKQCDSPYIVKYYGSYFKNTDLWIVME 78
Query: 767 YLPNGNLSE--KIRTKRDWAAKYKIVL-GVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 823
Y G++S+ KI K + +L +GL +LH + H D+KA NI+ +E
Sbjct: 79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEE 135
Query: 824 MEPHLAEFG 832
+ LA+FG
Sbjct: 136 GQAKLADFG 144
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.003
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 35/166 (21%)
Query: 788 KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK-------YLTQLA 840
+ ++ +A G+ +L H DL A N + +ENM +A+FG Y Q
Sbjct: 117 RFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGC 173
Query: 841 DGSFPAKIAWTESGEFYNAMKEEMYM---DVYGFGEIILEILTNGRLTNAGSSLQNKPID 897
P K ES + + +Y DV+ FG + EI+T G+ AG ++N
Sbjct: 174 ASKLPVKWLALES------LADNVYTTHSDVWAFGVTMWEIMTRGQTPYAG--VEN---- 221
Query: 898 GLLGEMYNE----NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS 939
E+YN N + ++ V ++ C P RPS
Sbjct: 222 ---SEIYNYLIKGNRLKQPPDCLED---VYELMCQCWSPEPKCRPS 261
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.003
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 41/191 (21%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQA--YLLYDYL 768
TG V+VK ++ + + S + I ++ H+N+++ G C + L+ +Y+
Sbjct: 32 TGEMVAVKTLKRECGQ-QNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYV 90
Query: 769 PNGNLSEKIRTKRDWAAKYKIVLG--------VARGLCFLHHDCYPAIPHGDLKASNIVF 820
P G+L RD+ K+K+ L + G+ +LH Y H DL A N++
Sbjct: 91 PLGSL-------RDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYI---HRDLAARNVLL 140
Query: 821 DENMEPHLAEFGF--------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM---DVY 869
D + + +FG +Y DG P E +KE + DV+
Sbjct: 141 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVE------CLKENKFSYASDVW 194
Query: 870 GFGEIILEILT 880
FG + E+LT
Sbjct: 195 SFGVTLYELLT 205
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.003
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 28/185 (15%)
Query: 716 ITVSVKKIEWGA---TRIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
+ V+VK ++ A R ++SE ++ +G H+N++ LLG C ++ +Y
Sbjct: 66 MKVAVKMLKPTAHSSEREALMSELKIMSHLGN--HENIVNLLGACTIGGPILVITEYCCY 123
Query: 771 GNLSEKIRTKRDWAAKYKIVLG----VARGLCFL-HHDCYPAIPHGDLKASNIVFDENME 825
G+L +R KR+ + +L VA+G+ FL +C H DL A N++
Sbjct: 124 GDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCI----HRDLAARNVLLTHGKI 179
Query: 826 PHLAEFGF--------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILE 877
+ +FG Y+ + + P K ES F E DV+ +G ++ E
Sbjct: 180 VKICDFGLARDIMNDSNYVVK-GNARLPVKWMAPES-IFNCVYTFE--SDVWSYGILLWE 235
Query: 878 ILTNG 882
I + G
Sbjct: 236 IFSLG 240
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.003
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIG---TVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
T T+++KKI + S I I ++H N++RL ++ + YL+++YL +
Sbjct: 26 TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYL-D 84
Query: 771 GNLSEKIRTKRDWAAKYKIV----LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826
+L + + + D+A +++ + RG+ + H + H DLK N++ D
Sbjct: 85 LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNA 141
Query: 827 -HLAEFG 832
LA+FG
Sbjct: 142 LKLADFG 148
|
Length = 294 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.004
Identities = 51/225 (22%), Positives = 88/225 (39%), Gaps = 41/225 (18%)
Query: 745 HKNLIRLLGFCYNRHQA--YLLYDYLPNGNLS---EKIRTKRDWAAKY---KIVLGVARG 796
+++ G + + + +Y G+L +K++ + + KI V +G
Sbjct: 58 SPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKG 117
Query: 797 LCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESG-E 855
L +LH I H D+K SNI+ + L +FG G +A T +G
Sbjct: 118 LSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFG-------VSGELVNSLAGTFTGTS 167
Query: 856 FYNA---MKEEMYM---DVYGFGEIILEILTNGRLTNAGSSLQN-KPIDGLLG------- 901
FY A ++ + Y DV+ G +LE+ R PI+ LL
Sbjct: 168 FYMAPERIQGKPYSITSDVWSLGLTLLEV-AQNRFPFPPEGEPPLGPIE-LLSYIVNMPN 225
Query: 902 -EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
E+ +E G S +E K + L + P+ RP+ + L+
Sbjct: 226 PELKDEPGNGIKWS--EEFKDFIKQCL--EKD-PTRRPTPWDMLE 265
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 955 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.98 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.98 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.98 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.98 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.98 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.98 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.98 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.98 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.98 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.98 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.98 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.98 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.98 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.98 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.98 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.98 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.97 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.97 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.97 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.97 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.97 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.97 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.97 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.97 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.97 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.97 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.97 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.97 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.97 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.97 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.97 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.97 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.97 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.97 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.97 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.97 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.97 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.97 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.97 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.97 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.97 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.97 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.97 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.97 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.97 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.97 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.97 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.97 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.97 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.97 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.97 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.97 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.97 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.97 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.97 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.97 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.97 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.97 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.97 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.97 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.97 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.97 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.97 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.97 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.97 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.97 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.96 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.96 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.96 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.96 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.96 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.96 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.96 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.96 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.96 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.96 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.96 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.95 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.95 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.95 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.95 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.95 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.95 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.95 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.94 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.94 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.93 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.93 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.93 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.93 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.92 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.92 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.91 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.91 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.91 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.91 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.9 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.9 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.9 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.89 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.88 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.87 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.87 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.86 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.86 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.85 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.85 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.83 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.81 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.8 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.8 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.78 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.78 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.76 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.76 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.74 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.74 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.74 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.71 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.71 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.7 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.67 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.67 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.66 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.65 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.65 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.64 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.64 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.64 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.64 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.63 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.63 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.62 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.6 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.57 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.55 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.52 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.5 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.49 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.45 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.39 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.34 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.31 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.29 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.22 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.21 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.21 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.21 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.2 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.15 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.01 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.98 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.95 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.95 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.92 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 98.9 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.88 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.87 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.85 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.83 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.82 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.8 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.79 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.78 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.77 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.76 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.71 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.7 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.68 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.68 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.66 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.63 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.57 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.56 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.53 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.41 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.28 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.17 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.11 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.1 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.06 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.0 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 97.99 | |
| KOG2120 | 419 | consensus SCF ubiquitin ligase, Skp2 component [Po | 97.95 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 97.93 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-119 Score=1137.38 Aligned_cols=920 Identities=36% Similarity=0.618 Sum_probs=781.5
Q ss_pred hHHHHHHHHHHHHhhccCCChhhHHHHHHhhhhCCCCCCCCCCCCCCCCCCCCCCCCCccccceeecCCCCcEEEEEcCC
Q 002186 5 HCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSM 84 (955)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~ 84 (955)
||-|+++++.++++......++|++||++||+++.+|.+.+.+|... .+||.|.||+|++ .++|+.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~--------~~~c~w~gv~c~~-~~~v~~L~L~~ 78 (968)
T PLN00113 8 HCPYLIFMLFFLFLNFSMLHAEELELLLSFKSSINDPLKYLSNWNSS--------ADVCLWQGITCNN-SSRVVSIDLSG 78 (968)
T ss_pred CCChHHHHHHHHHHHccCCCHHHHHHHHHHHHhCCCCcccCCCCCCC--------CCCCcCcceecCC-CCcEEEEEecC
Confidence 44443433333333223336688999999999998888888999643 5799999999986 57899999999
Q ss_pred CCCCccCCCCcchhcCCCCcEEECCCCcCcccCCcccc-CCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCC
Q 002186 85 KGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSG 163 (955)
Q Consensus 85 ~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~ 163 (955)
+++.|.+++.+.. +++|+.|+|++|+++|.+|..+. .+++|++|+|++|++++.+|. +.+++|++|||++|.+++
T Consensus 79 ~~i~~~~~~~~~~--l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~ 154 (968)
T PLN00113 79 KNISGKISSAIFR--LPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSG 154 (968)
T ss_pred CCccccCChHHhC--CCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccc
Confidence 9999999887776 89999999999999999998876 999999999999999998885 568999999999999999
Q ss_pred CCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccC
Q 002186 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGN 243 (955)
Q Consensus 164 ~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~ 243 (955)
.+|..++++++|++|+|++|.+.+.+|..|+++++|++|+|++|.+++.+|..++.+++|++|++++|.+.+.+|..+++
T Consensus 155 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 234 (968)
T PLN00113 155 EIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGG 234 (968)
T ss_pred cCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEe
Q 002186 244 MSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323 (955)
Q Consensus 244 l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 323 (955)
+++|++|++++|++++.+|..++++++|++|++++|++.+.+|..+.++++|++|++++|.+.+.+|..+..+++|+.|+
T Consensus 235 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 314 (968)
T PLN00113 235 LTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILH 314 (968)
T ss_pred CCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCC
Q 002186 324 LMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403 (955)
Q Consensus 324 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~ 403 (955)
+++|.+.+.+|..+..+++|+.|++++|.+++.+|..++.+.+|+.|++++|++++.+|..++....++.+++++|++.+
T Consensus 315 l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~ 394 (968)
T PLN00113 315 LFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEG 394 (968)
T ss_pred CCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccC
Q 002186 404 SLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTW 483 (955)
Q Consensus 404 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~ 483 (955)
.+|..+..+++|+.|++++|++++.+|..|..+++|++|++++|++++.+|..+..+++|++|++++| .+.+.+|..+
T Consensus 395 ~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n-~~~~~~p~~~- 472 (968)
T PLN00113 395 EIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARN-KFFGGLPDSF- 472 (968)
T ss_pred cCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCc-eeeeecCccc-
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 6777777655
Q ss_pred CCCccccccCcccccCCCCCC-CCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEE
Q 002186 484 SLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVL 562 (955)
Q Consensus 484 ~l~~L~~l~ls~n~l~~~~p~-~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 562 (955)
..++|+.|++++|++++.+|. +..+++|+.|+++.|++.+.+|..+.++++|++|+|++|+++|.+|..+..+++|+.|
T Consensus 473 ~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 552 (968)
T PLN00113 473 GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQL 552 (968)
T ss_pred ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEE
Confidence 468999999999999999886 4789999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCcccccccCCCccCCCCCCCCCCC----CCCCcccccccCCCCc
Q 002186 563 DLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSAYAGNPKLCGAPL----QPCHASVAILGKGTGK 638 (955)
Q Consensus 563 ~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lcg~~l----~~c~~~~~~~~~~~~~ 638 (955)
||++|+++|.+|..+..+++|++|++++|+++|.+|..+++..+...++.||+.+||.+. .+|... .+....
T Consensus 553 ~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~----~~~~~~ 628 (968)
T PLN00113 553 DLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV----RKTPSW 628 (968)
T ss_pred ECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccc----ccccee
Confidence 999999999999999999999999999999999999999999999999999999998653 356421 111111
Q ss_pred eeeeehhHHHHHHHHHHHH-HhheeeecCC--C------CCcceeeccC--CCCcchhhHhhhcccchhhhccCCCCCce
Q 002186 639 LKFVLLLCAGIVMFIAAAL-LGIFFFRRGG--K------GHWKMISFLG--LPQFTANDVLRSFNSTECEEAARPQSAAG 707 (955)
Q Consensus 639 ~~~~i~~~~~~vv~~~~~~-~~~~~~~r~~--~------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~g~~g~v 707 (955)
..+++++++++++++++++ ++++++|++. + +.|....+.. ...++..++.+.+. +.+.+|+|+||+|
T Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ig~G~~g~V 706 (968)
T PLN00113 629 WFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLK--EENVISRGKKGAS 706 (968)
T ss_pred eeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHHHHhhCC--cccEEccCCCeeE
Confidence 1112122222222222222 2222222111 1 1233322211 11234556666676 7788999999999
Q ss_pred EEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChhHHhhcCCCHHHH
Q 002186 708 CKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAK 786 (955)
Q Consensus 708 y~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~ 786 (955)
|+|+. .+|+.||||+++.... ...+|++.+++++|||||+++|+|.+++..|+|||||++|+|.++++. .+|.++
T Consensus 707 y~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-l~~~~~ 782 (968)
T PLN00113 707 YKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-LSWERR 782 (968)
T ss_pred EEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc-CCHHHH
Confidence 99995 6899999999864322 123468899999999999999999999999999999999999999974 899999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCcccccccCchhhhhccCCcccc
Q 002186 787 YKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM 866 (955)
Q Consensus 787 ~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 866 (955)
.+|+.|+|+|++|||+.+.++|+|||+||+||+++.++.+++. ||......... ...+...|++||+..+..++.++
T Consensus 783 ~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~s 859 (968)
T PLN00113 783 RKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDT--KCFISSAYVAPETRETKDITEKS 859 (968)
T ss_pred HHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCC--CccccccccCcccccCCCCCccc
Confidence 9999999999999998888899999999999999999988875 66543322111 11234568889999888899999
Q ss_pred cchhHHHHHHHHHhCCCCCCCCCCC----CCcccc----ccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCC
Q 002186 867 DVYGFGEIILEILTNGRLTNAGSSL----QNKPID----GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP 938 (955)
Q Consensus 867 DV~S~Gvvl~Elltg~~p~~~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RP 938 (955)
|||||||++|||+||+.|+...... ..|... .......++......+...+++.++.+++.+||+.||++||
T Consensus 860 Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP 939 (968)
T PLN00113 860 DIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARP 939 (968)
T ss_pred chhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCc
Confidence 9999999999999999998632211 111111 11112223321111222345667889999999999999999
Q ss_pred CHHHHHHHhhccCC
Q 002186 939 SMEEALKLLSGLKP 952 (955)
Q Consensus 939 t~~ev~~~L~~~~~ 952 (955)
||+||+++|+++.+
T Consensus 940 t~~evl~~L~~~~~ 953 (968)
T PLN00113 940 CANDVLKTLESASR 953 (968)
T ss_pred CHHHHHHHHHHhhc
Confidence 99999999998754
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-63 Score=630.59 Aligned_cols=517 Identities=34% Similarity=0.577 Sum_probs=492.6
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCcccc-CCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQ-SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
.+++.|||++|.++|.+|..|..+++|++|+|++|++++.+|..+. .+++|++|||++|++++.+|. +.+++|++|+
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~ 146 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLD 146 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEE
Confidence 3689999999999999999999999999999999999999997754 999999999999999998886 5689999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++.+|..|+++++|++|+|++|.+.+.+|..++++++|++|++++|.+.+.+|..++++++|++|++++|++++
T Consensus 147 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 226 (968)
T PLN00113 147 LSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSG 226 (968)
T ss_pred CcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
.+|..++++++|++|++++|++++.+|..+.++++|++|++++|++++.+|.++..+++|+.|++++|.+.+.+|..+..
T Consensus 227 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~ 306 (968)
T PLN00113 227 EIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQ 306 (968)
T ss_pred cCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+++|+.|++++|.+.+.+|..+..+++|+.|++++|.+.+.+|..+.....|+.+++++|++.+.+|.++..+++|+.|+
T Consensus 307 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~ 386 (968)
T PLN00113 307 LQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLI 386 (968)
T ss_pred CCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccC
Q 002186 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNIT 499 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~ 499 (955)
+++|++.+.+|..+..+++|+.|++++|++++.+|..+..+++|++|++++| .+.+.+|..++.+++|+.|++++|.+.
T Consensus 387 l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~L~~n~~~ 465 (968)
T PLN00113 387 LFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNN-NLQGRINSRKWDMPSLQMLSLARNKFF 465 (968)
T ss_pred CcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCC-cccCccChhhccCCCCcEEECcCceee
Confidence 9999999999999999999999999999999999999999999999999999 788999999999999999999999999
Q ss_pred CCCCCCCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCC
Q 002186 500 GNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGS 579 (955)
Q Consensus 500 ~~~p~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 579 (955)
+.+|......+|+.|++++|++++.+|..+.++++|+.|+|++|++.+.+|..+.++++|++|+|++|.++|.+|..|..
T Consensus 466 ~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 545 (968)
T PLN00113 466 GGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSE 545 (968)
T ss_pred eecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhC
Confidence 99998877889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEECCCCcceeccCCc-ccccccCCCccCCCCCCCCC
Q 002186 580 CSSLTVLNVSFNDISGSIPSG-KVLRLMGSSAYAGNPKLCGA 620 (955)
Q Consensus 580 l~~L~~L~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~lcg~ 620 (955)
+++|++|++++|+++|.+|.. ..+..+....+.+|+..+..
T Consensus 546 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~ 587 (968)
T PLN00113 546 MPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSL 587 (968)
T ss_pred cccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeC
Confidence 999999999999999999975 23444555667778765533
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-50 Score=446.02 Aligned_cols=268 Identities=30% Similarity=0.528 Sum_probs=224.2
Q ss_pred Ccchh---hHhhhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccch-HHHHHHHHHHHhccCCCCceeEeEEEE
Q 002186 681 QFTAN---DVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR-IKIVSEFITRIGTVRHKNLIRLLGFCY 756 (955)
Q Consensus 681 ~~~~~---~~~~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~-~~~~~~e~~~l~~l~H~niv~l~g~~~ 756 (955)
.|+.. .+++.|+ ..+.||+|+||.||||.+++|..||||++...... .++|..|++++++++|||+|+|+|||.
T Consensus 64 ~fs~~el~~AT~~Fs--~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~ 141 (361)
T KOG1187|consen 64 SFSYDELRKATNNFS--ESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCL 141 (361)
T ss_pred eeeHHHHHHHHhCCc--hhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEe
Confidence 45554 4556788 88999999999999999999999999998765544 667999999999999999999999999
Q ss_pred cCC-eeEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcc
Q 002186 757 NRH-QAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 831 (955)
Q Consensus 757 ~~~-~~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~Df 831 (955)
+.+ +.+||||||++|+|+++|+. .++|.+|++||.++|+||+|||..+.|+||||||||+|||||+++++||+||
T Consensus 142 e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDF 221 (361)
T KOG1187|consen 142 EGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDF 221 (361)
T ss_pred cCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCc
Confidence 988 59999999999999999987 4489999999999999999999999999999999999999999999999999
Q ss_pred cccccccc-cCCCC-c-ccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCC-----CCCCcccc----cc
Q 002186 832 GFKYLTQL-ADGSF-P-AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGS-----SLQNKPID----GL 899 (955)
Q Consensus 832 Gl~~~~~~-~~~~~-~-~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~-----~~~~~~~~----~~ 899 (955)
|+|+.... ..... . .++..|.+|||+.....+.|+||||||||++|++||+++.+... ....|... ..
T Consensus 222 GLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~ 301 (361)
T KOG1187|consen 222 GLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGK 301 (361)
T ss_pred cCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcc
Confidence 99976543 22211 1 45666899999999999999999999999999999998877432 12233211 34
Q ss_pred ccccccccccCCCCch-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 900 LGEMYNENEVGSSSSL-QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 900 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
+.+++|+.... .... .+++.++..++.+|++.+|++||+|.||+++|+.+.
T Consensus 302 ~~eiiD~~l~~-~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 302 LREIVDPRLKE-GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred hhheeCCCccC-CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 56777776331 2222 267888999999999999999999999999997654
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-44 Score=388.43 Aligned_cols=246 Identities=22% Similarity=0.261 Sum_probs=198.0
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCC-eeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-QAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv~ey~~~ 770 (955)
..+.+|+|+||+||+|....-..||||++..... ..+.|.+|+.+|.+++|||||+++|+|.++. ..++|||||++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 4455999999999999986444499999976432 2568999999999999999999999999887 79999999999
Q ss_pred CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCC-cccCCCCCCCeeeCCCC-CceECccccccccccc--CC
Q 002186 771 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPA-IPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLA--DG 842 (955)
Q Consensus 771 gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~-iiHrdlk~~NiLl~~~~-~~ki~DfGl~~~~~~~--~~ 842 (955)
|+|.++++. .++|..+++++.|||+||.|||+. + ||||||||+|||++.++ ++||+|||+++..... ..
T Consensus 125 GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~ 201 (362)
T KOG0192|consen 125 GSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSM 201 (362)
T ss_pred CcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeeccccccc
Confidence 999999965 679999999999999999999998 6 99999999999999997 9999999999876542 22
Q ss_pred CCcccccccCchhhhh--ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 843 SFPAKIAWTESGEFYN--AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~--~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
....++..+++||++. ..+++.|+||||||||+|||+||+.||..-...+ ....+...... ++.......
T Consensus 202 ~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~------~~~~v~~~~~R--p~~p~~~~~ 273 (362)
T KOG0192|consen 202 TSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ------VASAVVVGGLR--PPIPKECPP 273 (362)
T ss_pred cCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhcCCC--CCCCccCCH
Confidence 2234556678889998 5689999999999999999999999997544311 11111111101 111112445
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+..++.+||+.||++||++.|++..|+.+.
T Consensus 274 ~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~ 304 (362)
T KOG0192|consen 274 HLSSLMERCWLVDPSRRPSFLEIVSRLESIM 304 (362)
T ss_pred HHHHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence 6778888899999999999999999998653
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=363.30 Aligned_cols=247 Identities=19% Similarity=0.219 Sum_probs=201.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeec--ccchHHHHHHHHHHHhccCCCCceeEeEEEEcCC-eeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEW--GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-QAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv~ey~~~ 770 (955)
....||+|..|+|||+.. ++++.+|+|.+.. +..-.+++.+|++++.+.+||+||+++|+|+.++ +.+|+||||.+
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDg 162 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDG 162 (364)
T ss_pred hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCC
Confidence 667899999999999995 6899999999954 3344778899999999999999999999999988 59999999999
Q ss_pred CChhHHhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCcccc
Q 002186 771 GNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKI 848 (955)
Q Consensus 771 gsL~~~l~~~~--~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~ 848 (955)
|||++++++.. +...--+|+.+|.+||.|||+. ++||||||||+|||++..|++||||||.++.....-...-.++
T Consensus 163 GSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT 240 (364)
T KOG0581|consen 163 GSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGT 240 (364)
T ss_pred CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhccccccc
Confidence 99999998644 4555568999999999999963 2999999999999999999999999999886654432233356
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..|++||...+..|+.++||||||+.++|+++|+.|+...... .......+..+.+..+...+.. ....++.+++-.
T Consensus 241 ~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~-~~~~~~Ll~~Iv~~ppP~lP~~--~fS~ef~~FV~~ 317 (364)
T KOG0581|consen 241 SAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP-YLDIFELLCAIVDEPPPRLPEG--EFSPEFRSFVSC 317 (364)
T ss_pred ccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC-CCCHHHHHHHHhcCCCCCCCcc--cCCHHHHHHHHH
Confidence 6689999999999999999999999999999999998754111 1112244555555443322222 356678889999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 002186 929 CTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~ 946 (955)
|+++||.+|||++|++++
T Consensus 318 CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 318 CLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HhcCCcccCCCHHHHhcC
Confidence 999999999999999863
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=375.20 Aligned_cols=245 Identities=24% Similarity=0.366 Sum_probs=200.4
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|.||+|+.|.......||||.++.+....+.|.+|+++|++++|+|||+++|+|..++.+|||||||+.|+|.
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl 289 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLL 289 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHH
Confidence 66889999999999999977779999999988778888999999999999999999999999988999999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--C--Ccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--S--FPA 846 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~--~~~ 846 (955)
++|+. .+...+-+.++.|||+||+||++. .+|||||.++|||++++..+||+|||+|+......- + ..-
T Consensus 290 ~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kf 366 (468)
T KOG0197|consen 290 DYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKF 366 (468)
T ss_pred HHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCC
Confidence 99986 346778889999999999999999 999999999999999999999999999995433221 1 112
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
.+.| .+||.+...+++.|||||||||+||||+|-++.++.+....+ .+..+-....++.+ +.++..+.++|
T Consensus 367 PIkW-tAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e-----v~~~le~GyRlp~P---~~CP~~vY~lM 437 (468)
T KOG0197|consen 367 PIKW-TAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE-----VLELLERGYRLPRP---EGCPDEVYELM 437 (468)
T ss_pred Ccee-cCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH-----HHHHHhccCcCCCC---CCCCHHHHHHH
Confidence 4554 467989999999999999999999999996665554433221 11111111112212 23455677899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhccC
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
..||+.+|++|||++.+...|+++.
T Consensus 438 ~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 438 KSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred HHHhhCCcccCCCHHHHHHHHHHhh
Confidence 9999999999999999998888764
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-42 Score=354.11 Aligned_cols=191 Identities=24% Similarity=0.310 Sum_probs=169.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
....||+|+||+||||+. .+|.+||||.+.... ...+....|+.+|+.++|||||++++++++++.+|||||||.+
T Consensus 14 ~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~g 93 (429)
T KOG0595|consen 14 LSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNG 93 (429)
T ss_pred ehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCC
Confidence 666799999999999995 578999999997542 3356678999999999999999999999999999999999999
Q ss_pred CChhHHhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC------CCceECcccccccccccCC
Q 002186 771 GNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN------MEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 771 gsL~~~l~~~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~------~~~ki~DfGl~~~~~~~~~ 842 (955)
|||.++|+++ ++......++.|+|.|+++||++ +||||||||+||||+.. -.+||+|||+|+.......
T Consensus 94 GDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~ 170 (429)
T KOG0595|consen 94 GDLSDYIRRRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSM 170 (429)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhH
Confidence 9999999874 57777889999999999999999 99999999999999865 4689999999998775432
Q ss_pred C-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCC
Q 002186 843 S-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 888 (955)
Q Consensus 843 ~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~ 888 (955)
. +.++.+.|++||+....+|+.|+|+||.|+|+|||+||+.||...
T Consensus 171 a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 171 AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 2 234778899999999999999999999999999999999999743
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-41 Score=364.17 Aligned_cols=238 Identities=19% Similarity=0.245 Sum_probs=199.6
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeec----ccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEW----GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~----~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
....+|+|||+.+|+++. .+|+.||+|++.+ .....+...+||++.++++|||||++++||++.+.+|||.|+|+
T Consensus 22 ~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~ 101 (592)
T KOG0575|consen 22 RGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCH 101 (592)
T ss_pred eeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecC
Confidence 888999999999999996 8999999999976 34456778899999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCc
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFP 845 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~ 845 (955)
+|+|.+++++ .++.++...+.+||+.||.|||++ +|||||||-.|++|++++++||+|||+|........ .+-
T Consensus 102 ~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~Tl 178 (592)
T KOG0575|consen 102 RGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTL 178 (592)
T ss_pred CccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCccccccee
Confidence 9999999984 667888889999999999999999 999999999999999999999999999987664422 234
Q ss_pred ccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 846 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
++++.|-+||+......+..+||||+|||||.|++|++||+... ..+....+...... .+.....+..++
T Consensus 179 CGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~------vkety~~Ik~~~Y~----~P~~ls~~A~dL 248 (592)
T KOG0575|consen 179 CGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT------VKETYNKIKLNEYS----MPSHLSAEAKDL 248 (592)
T ss_pred cCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch------HHHHHHHHHhcCcc----cccccCHHHHHH
Confidence 48888999999998899999999999999999999999997431 11111111111101 111233456688
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 002186 926 ALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+.+.|+.||.+|||+++|+.
T Consensus 249 I~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 249 IRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHHHhcCCcccCCCHHHHhc
Confidence 88899999999999999985
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=336.03 Aligned_cols=247 Identities=20% Similarity=0.318 Sum_probs=193.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
...++|+|+||+|||++. .+|+.||||++..... -.+...+||++|++++|||+|.++++|......+||+|||+.
T Consensus 6 ~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh 85 (396)
T KOG0593|consen 6 KLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH 85 (396)
T ss_pred hhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch
Confidence 778899999999999995 5899999999965332 366789999999999999999999999999999999999986
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCc--
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP-- 845 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~-- 845 (955)
++.+-|.. ..+......|+.|+++|+.|+|++ +||||||||+|||+..++.+|+||||+|+.........+
T Consensus 86 -TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDY 161 (396)
T KOG0593|consen 86 -TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDY 161 (396)
T ss_pred -HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhh
Confidence 44444433 557777789999999999999999 999999999999999999999999999998764333222
Q ss_pred ccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc-cccccccc-------cccc------ccC
Q 002186 846 AKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-IDGLLGEM-------YNEN------EVG 910 (955)
Q Consensus 846 ~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~-~~~~~~~~-------~~~~------~~~ 910 (955)
..+.||.+||..-+ ..|+..+|||+.||++.||+||.+.|++..++.+.. +...+++. +... .++
T Consensus 162 VATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP 241 (396)
T KOG0593|consen 162 VATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLP 241 (396)
T ss_pred hhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecC
Confidence 26889999998766 689999999999999999999988777554432211 11111111 1100 011
Q ss_pred CCC---c----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 911 SSS---S----LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 911 ~~~---~----~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..+ . .+....-+++++..|++.||++|++.+|++.
T Consensus 242 ~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 242 EPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111 1 1233456789999999999999999999875
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=345.92 Aligned_cols=244 Identities=16% Similarity=0.189 Sum_probs=194.8
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc--------hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT--------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~--------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.+|.|+||.|-+|. ..+|+.||||++.+... ......+|+++|++++|||||++++++..++..||||
T Consensus 176 i~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVl 255 (475)
T KOG0615|consen 176 ISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVL 255 (475)
T ss_pred eeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEE
Confidence 77889999999999998 57999999999976321 1334579999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC---CCceECccccccccccc
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~DfGl~~~~~~~ 840 (955)
|||+||+|.+.+-. .+....-+.+++|++.|+.|||+. +|+||||||+|||+..+ ..+||+|||+|+.....
T Consensus 256 E~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~ 332 (475)
T KOG0615|consen 256 EYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG 332 (475)
T ss_pred EEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccchhhccccc
Confidence 99999999998854 345556678999999999999999 99999999999999766 77999999999987532
Q ss_pred CC-CCcccccccCchhhhhccC---CcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 841 DG-SFPAKIAWTESGEFYNAMK---EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 841 ~~-~~~~~~~~~~~~e~~~~~~---~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
.- .+.++++.|.+||+..+.. +..|+|+||+|||+|-++||-.||.+..... .. ..++........++.+.
T Consensus 333 sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl---~eQI~~G~y~f~p~~w~ 407 (475)
T KOG0615|consen 333 SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SL---KEQILKGRYAFGPLQWD 407 (475)
T ss_pred eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cH---HHHHhcCcccccChhhh
Confidence 21 1234677788999886543 3457899999999999999999997433211 01 12222222222244556
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+..++.++++.++|..||++|||++|++++
T Consensus 408 ~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 408 RISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred hhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 677889999999999999999999999863
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=328.70 Aligned_cols=244 Identities=17% Similarity=0.231 Sum_probs=193.9
Q ss_pred cccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeE-EEEcCCe-eEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLG-FCYNRHQ-AYLL 764 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g-~~~~~~~-~~lv 764 (955)
|. ..++||+|.||+|||+. +.+|..||.|+++-+ .+..+....|+.+|++++|||||++++ -+.++++ .+||
T Consensus 21 y~--Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 21 YQ--ILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HH--HHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 55 88899999999999998 789999999999753 334567789999999999999999998 4445555 8999
Q ss_pred EeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCC--cccCCCCCCCeeeCCCCCceECccccccc
Q 002186 765 YDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~--iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
||||..|||...|+. ..+....+++..|++.||+++|+. .|. |+||||||.||+|+.++.+|++|||+++.
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 999999999999964 346777899999999999999984 235 99999999999999999999999999998
Q ss_pred ccccCCC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCc
Q 002186 837 TQLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 914 (955)
Q Consensus 837 ~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (955)
....... .-.++++|++||.....+|+.|+||||+||++|||+.-++||.+..-. .....+-+.. . ++.
T Consensus 178 l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~------~L~~KI~qgd-~--~~~ 248 (375)
T KOG0591|consen 178 LSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLL------SLCKKIEQGD-Y--PPL 248 (375)
T ss_pred hcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHH------HHHHHHHcCC-C--CCC
Confidence 7654322 223889999999999999999999999999999999999999865211 1111111111 1 112
Q ss_pred h-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 915 L-QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 915 ~-~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+ .-....+.+++..|+..||+.||+.-..+..
T Consensus 249 p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 249 PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred cHHHhhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence 2 2234567788888999999999985444433
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=340.86 Aligned_cols=251 Identities=20% Similarity=0.293 Sum_probs=196.8
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAY 762 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~ 762 (955)
+.|+ ..++||+|.||.||||+ +.+|+.||+|++..+.. ......+||.+|++++|||||+|.|...++ +.+|
T Consensus 117 ~~fe--ki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 117 DSFE--KIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred HHHH--HHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 3466 88999999999999999 67999999999976442 245678999999999999999999988776 6899
Q ss_pred EEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
||+|||+. ||..++.. +.+..+.+.++.|++.||+|+|+. +|+|||||.+|||||.+|.+||+|||+|+++..
T Consensus 195 lVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 195 LVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 99999986 89888876 568889999999999999999999 999999999999999999999999999997765
Q ss_pred cCCC---CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Cccccccc
Q 002186 840 ADGS---FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLL 900 (955)
Q Consensus 840 ~~~~---~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~ 900 (955)
.... ...-+.||.+||...+ ..|+..+|+||.|||+.||++|++++.+..... .|.....-
T Consensus 271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP 350 (560)
T KOG0600|consen 271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLP 350 (560)
T ss_pred CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCC
Confidence 4422 1235779999998765 579999999999999999999998887543221 12211110
Q ss_pred c-cccccccc---CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 901 G-EMYNENEV---GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 901 ~-~~~~~~~~---~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
. ..+.+... ...+.........++++...|..||++|.|+.++++
T Consensus 351 ~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 351 HATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0 11111100 000111223456778888899999999999999874
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=317.37 Aligned_cols=248 Identities=20% Similarity=0.269 Sum_probs=197.7
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccch---HHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|+|.||.||+|. ..+|+.||||+++.+... .....+||+.|+.++|||||.+++++-+.+...||+|||+.
T Consensus 6 ~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t 85 (318)
T KOG0659|consen 6 KLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT 85 (318)
T ss_pred hhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc
Confidence 77899999999999999 579999999999876543 45678999999999999999999999999999999999985
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC--c
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF--P 845 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~--~ 845 (955)
||+.+|+. .+.....+.++.++.+|++|+|.+ .|+|||+||.|+|+++++.+||+|||+|+......... .
T Consensus 86 -dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~ 161 (318)
T KOG0659|consen 86 -DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQ 161 (318)
T ss_pred -cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccc
Confidence 99999987 346777889999999999999999 99999999999999999999999999999876544332 2
Q ss_pred ccccccCchhhhh-ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------cccccccccccccccc
Q 002186 846 AKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLGEMYNENEV 909 (955)
Q Consensus 846 ~~~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~~~~~~~~~ 909 (955)
..+.||.+||... +..|+..+||||.|||+.||+-|.+.+.+..++.+ |+.-..+.+...-...
T Consensus 162 V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~ 241 (318)
T KOG0659|consen 162 VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQF 241 (318)
T ss_pred eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcC
Confidence 4678999999765 56799999999999999999998766654443322 2211111111100000
Q ss_pred C---CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 910 G---SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 910 ~---~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+ .......+..+.++++..++..||.+|.|++|++++
T Consensus 242 P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 242 PKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 0 001123445667899999999999999999999864
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-40 Score=345.53 Aligned_cols=255 Identities=18% Similarity=0.214 Sum_probs=198.9
Q ss_pred hHhhhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccch--HHHHHHHHHHHhccC-CCCceeEeEEEEcCC-e
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATR--IKIVSEFITRIGTVR-HKNLIRLLGFCYNRH-Q 760 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~--~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~-~ 760 (955)
.+.++|. ..+++|.|.||.||+|+ ..+|..||||+|+..-.. .-.-.+|+..|+++. |||||++.+++.+.+ .
T Consensus 7 ~~m~RY~--~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYT--VIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHH--HHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 3445666 88999999999999999 568999999999865433 334578999999999 999999999999887 9
Q ss_pred eEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
.|+|||||+ .+|++.++. ..+......|+.||.+||+|+|.+ |+.|||+||+|||+.....+||+|||+|+..
T Consensus 85 L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 85 LYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred EeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 999999997 599999976 346778889999999999999999 9999999999999999999999999999876
Q ss_pred cccCCCCc-ccccccCchhhh-hccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc-cccccccc-----------
Q 002186 838 QLADGSFP-AKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-IDGLLGEM----------- 903 (955)
Q Consensus 838 ~~~~~~~~-~~~~~~~~~e~~-~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~-~~~~~~~~----------- 903 (955)
......+. ..+.||.+||+. +...|+.++|||++|||++|+.+-++.|.+.....+.. +.+.++..
T Consensus 161 ~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~L 240 (538)
T KOG0661|consen 161 RSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNL 240 (538)
T ss_pred ccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHH
Confidence 55443322 368899999976 55678999999999999999999988887543321111 00111100
Q ss_pred ---cc---cc--ccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 904 ---YN---EN--EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 904 ---~~---~~--~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.. +. +.....-.+....++++++.+|+++||++|||++|++++
T Consensus 241 a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 241 ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 00 00 000011113356678899999999999999999999875
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=368.99 Aligned_cols=245 Identities=22% Similarity=0.262 Sum_probs=198.5
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
..+++|+|+||+||+|+. ++.+.||||.++.... ..++|++|+++++.++|||||+|+|+|..++..+||+|
T Consensus 490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFE 569 (774)
T KOG1026|consen 490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFE 569 (774)
T ss_pred ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEE
Confidence 567899999999999984 2456799999986433 57789999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc------------C----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECc
Q 002186 767 YLPNGNLSEKIRT------------K----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830 (955)
Q Consensus 767 y~~~gsL~~~l~~------------~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~D 830 (955)
||..|||.++|+. . +...+.+.||.|||.||+||-++ .+|||||-.+|+|+.++..+||+|
T Consensus 570 Ym~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~VKIsD 646 (774)
T KOG1026|consen 570 YMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVVKISD 646 (774)
T ss_pred ecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEEEecc
Confidence 9999999999974 1 45677899999999999999998 999999999999999999999999
Q ss_pred ccccccccccC-----CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccc
Q 002186 831 FGFKYLTQLAD-----GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 831 fGl~~~~~~~~-----~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
||+++.....+ +..-..+. +++||.+.+.+++++||||||||||||+.| |+.|+++-.+.+ .+..+.
T Consensus 647 fGLsRdiYssDYYk~~~~t~lPIR-WMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E------VIe~i~ 719 (774)
T KOG1026|consen 647 FGLSRDIYSSDYYKVRGNTLLPIR-WMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE------VIECIR 719 (774)
T ss_pred cccchhhhhhhhhcccCCceeeee-cCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH------HHHHHH
Confidence 99987543322 12222566 457798899999999999999999999988 666766433211 111222
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
+...+ +.+++++.++.++|..||+..|++||+++||-.+|+....
T Consensus 720 ~g~lL---~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 720 AGQLL---SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred cCCcc---cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 22211 2334566778899999999999999999999999986543
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=344.87 Aligned_cols=247 Identities=20% Similarity=0.253 Sum_probs=194.8
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|.||+||||.+.. .||||.++.. ....+.|..|+..+++-||.||+-+.|||..++. .||+.+|+|-
T Consensus 396 l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGs 472 (678)
T KOG0193|consen 396 LGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGS 472 (678)
T ss_pred ccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCc
Confidence 56789999999999999864 4999999764 3357789999999999999999999999998877 9999999999
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC----C
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----F 844 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~----~ 844 (955)
+|+.+||. +++..+-..||.|||+||.|||.+ +|||||+|+.||++++++++||+|||++.....-.+. .
T Consensus 473 SLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~q 549 (678)
T KOG0193|consen 473 SLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQ 549 (678)
T ss_pred hhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCC
Confidence 99999986 557778889999999999999999 9999999999999999999999999998654332221 2
Q ss_pred cccccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 845 PAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 845 ~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
+.+..-|++||+++ ..++++.+||||||||+|||+||.-|+. .....+ .+-..-+....+.. .....++.++
T Consensus 550 p~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dq-IifmVGrG~l~pd~---s~~~s~~pk~ 624 (678)
T KOG0193|consen 550 PHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQ-IIFMVGRGYLMPDL---SKIRSNCPKA 624 (678)
T ss_pred CccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhh-eEEEecccccCccc---hhhhccCHHH
Confidence 22333366777765 3478899999999999999999999987 222111 11111112111211 1222455667
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
+.+++..||..++++||.+.+++..|+.+.+
T Consensus 625 mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 625 MKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred HHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 8889999999999999999999998776544
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=339.38 Aligned_cols=237 Identities=23% Similarity=0.269 Sum_probs=188.5
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
+.+-+|.|+-|+||.|++. +++||||+++ +.-+.+|+-|++++|||||.+.|+|.....+|||||||+.|-|.
T Consensus 128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~------elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVR------ELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhhccCcccceeeeecc-CceehhHHHh------hhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 6677899999999999984 7889999986 22345688899999999999999999999999999999999999
Q ss_pred HHhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcccccc
Q 002186 775 EKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIAW 850 (955)
Q Consensus 775 ~~l~~~~--~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~~~ 850 (955)
.+|+... ....-..+..|||.||.|||.+ .|||||||+-||||..+..+||+|||-++....... ++.++++
T Consensus 201 ~VLka~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVa- 276 (904)
T KOG4721|consen 201 EVLKAGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVA- 276 (904)
T ss_pred HHHhccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHh-
Confidence 9998744 4445578999999999999999 999999999999999999999999999876654322 2334555
Q ss_pred cCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCC-CccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 851 TESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ-NKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 851 ~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
+++||++...+.++|+||||||||||||+||..|+.+-+... .| +.-...+. ++.+. .+.+-+.-++..|
T Consensus 277 WMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw---GVGsNsL~---LpvPs---tcP~GfklL~Kqc 347 (904)
T KOG4721|consen 277 WMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW---GVGSNSLH---LPVPS---TCPDGFKLLLKQC 347 (904)
T ss_pred hhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE---eccCCccc---ccCcc---cCchHHHHHHHHH
Confidence 567899999999999999999999999999999986322211 01 11011111 11122 2334455677789
Q ss_pred cCCCCCCCCCHHHHHHHhhccC
Q 002186 930 TRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 930 l~~dp~~RPt~~ev~~~L~~~~ 951 (955)
|+..|..||++.+++.+|.-..
T Consensus 348 w~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 348 WNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred HhcCCCCCccHHHHHHHHhhcC
Confidence 9999999999999999987544
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=356.01 Aligned_cols=476 Identities=26% Similarity=0.391 Sum_probs=364.7
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
.++.|++++|.+. .+.+.+.+|..|.+|++++|+++ ..|++++.+..++.|+.++|+++ .+|++++.+.+|+.|+.+
T Consensus 46 ~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 4677888888887 44556778888888888888887 56777888888888888888887 678888888888888888
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCC
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~ 261 (955)
+|.+. .+|++++.+..|+.|+..+|+++ ..|..+.++.+|..+++.+|.+....|..+. |+.|++||...|-+. .+
T Consensus 123 ~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tl 198 (565)
T KOG0472|consen 123 SNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TL 198 (565)
T ss_pred cccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cC
Confidence 88887 57777888888888888888886 5777888888888888888887755555444 888888888888776 68
Q ss_pred CccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCccc-CCCCCCcEEecccccCCCCCccccCCC
Q 002186 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESF-ADLKNLRLLSLMYNEMSGTVPESLVQL 340 (955)
Q Consensus 262 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~l~~l 340 (955)
|++++.+.+|+.|+|..|++.. +| +|.++..|++|+++.|+++ .+|... .++.++.+|||..|+++ .+|+.++-+
T Consensus 199 P~~lg~l~~L~~LyL~~Nki~~-lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clL 274 (565)
T KOG0472|consen 199 PPELGGLESLELLYLRRNKIRF-LP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLL 274 (565)
T ss_pred ChhhcchhhhHHHHhhhccccc-CC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHh
Confidence 8888888999999999998874 45 7888888999999999887 455554 48888999999999988 688888888
Q ss_pred CCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCc---cceee-------ccCCC----CCCCCC
Q 002186 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV---LFKLI-------LFSNN----FTGSLS 406 (955)
Q Consensus 341 ~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~---l~~l~-------l~~n~----l~~~~p 406 (955)
.+|+.||+|+|.++ .+|..++++ .|+.|-+.+|.+. +|-.++-+.+. |++|. ++... -.+..|
T Consensus 275 rsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlr-TiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~ 351 (565)
T KOG0472|consen 275 RSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLR-TIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLP 351 (565)
T ss_pred hhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchH-HHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCC
Confidence 88999999999888 467788888 8888888888765 22222211111 11111 00000 001111
Q ss_pred -cC---ccCCCCCcEEECcCCccccccchhccCCC---CCCEEECCCCcCCCCCCcchhhccCCcc-cccCCCCCCCCCC
Q 002186 407 -PS---LSNCSSLVRLRLEDNSFSGEIPLKFSQLP---DINYIDLSRNGFTGGIPTDINQASKLEY-FNVSNNPKLGGMI 478 (955)
Q Consensus 407 -~~---~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~---~L~~L~Ls~N~l~~~ip~~~~~~~~L~~-L~ls~N~~l~~~~ 478 (955)
.. ....-+.+.|++++-+++. +|....... -....+++.|++. .+|..+..+..+.+ +++++| ..+.+
T Consensus 352 ~~~~~~~~~~i~tkiL~~s~~qlt~-VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn--~isfv 427 (565)
T KOG0472|consen 352 SESFPDIYAIITTKILDVSDKQLTL-VPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNN--KISFV 427 (565)
T ss_pred CCcccchhhhhhhhhhccccccccc-CCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcC--ccccc
Confidence 11 2234577889999999884 454433322 2778999999998 68888877777655 455554 44778
Q ss_pred CcccCCCCccccccCcccccCCCCC-CCCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCC
Q 002186 479 PAQTWSLPSLQNFSASACNITGNLP-PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLP 557 (955)
Q Consensus 479 p~~~~~l~~L~~l~ls~n~l~~~~p-~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 557 (955)
|..+..+++|..|++++|-+.. +| .++.+..|+.+|++.|+|. .+|..+..+..++.+-.++|++....|+.+.+|.
T Consensus 428 ~~~l~~l~kLt~L~L~NN~Ln~-LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~ 505 (565)
T KOG0472|consen 428 PLELSQLQKLTFLDLSNNLLND-LPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMR 505 (565)
T ss_pred hHHHHhhhcceeeecccchhhh-cchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhh
Confidence 8888899999999999876654 44 4578888999999999887 6888888888888888888999888888899999
Q ss_pred CCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCc
Q 002186 558 VLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG 600 (955)
Q Consensus 558 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~ 600 (955)
+|.+|||.+|.+. .+|..++++++|++|++++|+|. .|..
T Consensus 506 nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr--~Pr~ 545 (565)
T KOG0472|consen 506 NLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR--QPRH 545 (565)
T ss_pred hcceeccCCCchh-hCChhhccccceeEEEecCCccC--CCHH
Confidence 9999999999998 68889999999999999999998 5544
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=355.94 Aligned_cols=243 Identities=20% Similarity=0.295 Sum_probs=199.7
Q ss_pred hhhhccCCCCCceEEEeCC----CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..++||.|.||+||+|+++ ....||||.++.+.. +..+|..|..+|++..||||++|.|+......++||.|||
T Consensus 633 Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyM 712 (996)
T KOG0196|consen 633 IEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYM 712 (996)
T ss_pred EEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhh
Confidence 5578999999999999964 245799999998643 4668999999999999999999999999999999999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-C
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-F 844 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-~ 844 (955)
+||+|+.+|+. +..|.+-..+.++||.||.||-+. +.|||||.++|||++.+..+||+|||+++...++... .
T Consensus 713 ENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~y 789 (996)
T KOG0196|consen 713 ENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY 789 (996)
T ss_pred hCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccCCCccc
Confidence 99999999986 457788889999999999999988 9999999999999999999999999999987554321 1
Q ss_pred cc-----cccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 845 PA-----KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 845 ~~-----~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
.. .+. +++||.+...+.+..+|||||||||||.++ |.+|+++-.+ .+.+..+-+...+ +.+.++
T Consensus 790 tt~GGKIPiR-WTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN------QdVIkaIe~gyRL---PpPmDC 859 (996)
T KOG0196|consen 790 TTLGGKIPIR-WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN------QDVIKAIEQGYRL---PPPMDC 859 (996)
T ss_pred cccCCcccee-ecChhHhhhcccCchhhccccceEEEEecccCCCcccccch------HHHHHHHHhccCC---CCCCCC
Confidence 11 355 457798899999999999999999999876 7788764322 1122222111111 223456
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
...+.++|+.||++|-.+||++.|++..|.++
T Consensus 860 P~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl 891 (996)
T KOG0196|consen 860 PAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL 891 (996)
T ss_pred cHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 67888999999999999999999999999765
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=339.52 Aligned_cols=242 Identities=16% Similarity=0.225 Sum_probs=202.5
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
...+||+|+.|.||.|. ..+++.||||++....+ ..+...+|+.+|+..+|+|||.++..|...++.|.|||||++|+
T Consensus 277 ~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggs 356 (550)
T KOG0578|consen 277 DFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGS 356 (550)
T ss_pred chhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCc
Confidence 66789999999999998 56899999999987554 46667899999999999999999999988899999999999999
Q ss_pred hhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccccc
Q 002186 773 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIA 849 (955)
Q Consensus 773 L~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~~ 849 (955)
|.|++.. .++..+...|++++++||+|||.. +|+|||||+.|||++.++.+||+|||++........ ....+++
T Consensus 357 LTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTP 433 (550)
T KOG0578|consen 357 LTDVVTKTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTP 433 (550)
T ss_pred hhhhhhcccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCC
Confidence 9999876 578889999999999999999999 999999999999999999999999999876544332 2334889
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
|+++||++....|++|+||||+|++++||+-|.+||..+.++...... .+.. .+.-...+.....+.++..+|
T Consensus 434 YWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI------a~ng-~P~lk~~~klS~~~kdFL~~c 506 (550)
T KOG0578|consen 434 YWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI------ATNG-TPKLKNPEKLSPELKDFLDRC 506 (550)
T ss_pred CccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH------hhcC-CCCcCCccccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999865543321111 1111 111122234556788888999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 002186 930 TRSTPSDRPSMEEALKL 946 (955)
Q Consensus 930 l~~dp~~RPt~~ev~~~ 946 (955)
|..|+++||+++|++++
T Consensus 507 L~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 507 LVVDVEQRASAKELLEH 523 (550)
T ss_pred hhcchhcCCCHHHHhcC
Confidence 99999999999999874
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=335.75 Aligned_cols=244 Identities=17% Similarity=0.222 Sum_probs=191.8
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccch----HHHHHHHHHHHhccCCCCceeEeEEEEc----CCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR----IKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~----~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~e 766 (955)
....+|+|++|.||+|.. +|+.||||+++..... .+.+.+|+++|++++|||||+++|++.+ ....++|||
T Consensus 24 ~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 24 TSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred CCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence 446789999999999998 7999999999754322 3567899999999999999999999976 346899999
Q ss_pred ecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 767 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 767 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
|+++|+|.++++. ..+|....+++.|++.|++|+|+.. +++||||||+||+++.++.+||+|||+++....... .
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~-~ 179 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF-K 179 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhccccc-c
Confidence 9999999999975 4678899999999999999999732 678999999999999999999999999875433221 1
Q ss_pred cccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccc-ccCCCCchHHHHHH
Q 002186 845 PAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQDEIKL 921 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 921 (955)
..+...|.+||+... ..++.++|||||||++|||+||+.||....... ....+.... ....+ ......
T Consensus 180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~------~~~~i~~~~~~~~~~---~~~~~~ 250 (283)
T PHA02988 180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE------IYDLIINKNNSLKLP---LDCPLE 250 (283)
T ss_pred ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhcCCCCCCC---CcCcHH
Confidence 223344678888765 578999999999999999999999987432110 111111110 01111 123345
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
+.+++.+||+.||++||||+|+++.|+.++
T Consensus 251 l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 251 IKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 778999999999999999999999998765
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=331.50 Aligned_cols=243 Identities=20% Similarity=0.213 Sum_probs=188.9
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCC--eeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~ey~~~ 770 (955)
..+.+|+|+||.||.+... +|...|||.+..... ..+.+.+|+++|.+++|||||+++|...... .+++.|||+++
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~ 100 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPG 100 (313)
T ss_pred hhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCC
Confidence 7788999999999999965 599999999875422 2566899999999999999999999865544 69999999999
Q ss_pred CChhHHhhcC---CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-CCCceECcccccccccc--c---C
Q 002186 771 GNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQL--A---D 841 (955)
Q Consensus 771 gsL~~~l~~~---~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-~~~~ki~DfGl~~~~~~--~---~ 841 (955)
|||.+++.+. ++.....++..||++||+|||++ +||||||||+|||++. ++.+||+|||+++.... . .
T Consensus 101 GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~ 177 (313)
T KOG0198|consen 101 GSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDS 177 (313)
T ss_pred CcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccccccccccc
Confidence 9999999863 57888899999999999999998 9999999999999999 79999999999876552 1 1
Q ss_pred CCCcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 842 GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
.....+++.+++||+.... ....++||||+||++.||+||++|+........+........ ..| ..+.....
T Consensus 178 ~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-~~P------~ip~~ls~ 250 (313)
T KOG0198|consen 178 ELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-SLP------EIPDSLSD 250 (313)
T ss_pred cccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-CCC------CCCcccCH
Confidence 1122356778889988752 333589999999999999999988874211111111000011 111 11122345
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHh
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALKLL 947 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~~L 947 (955)
+..+++.+|++.||++|||++|++++-
T Consensus 251 ~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 251 EAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred HHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 567888899999999999999999764
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=320.76 Aligned_cols=244 Identities=20% Similarity=0.232 Sum_probs=192.0
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..++||.|..++||+|. .+++..||||++..+. ...+.+++|+..|+.++|||||+++..|..+...|+||.||.+|
T Consensus 30 L~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~G 109 (516)
T KOG0582|consen 30 LQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGG 109 (516)
T ss_pred EEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCC
Confidence 77889999999999998 7899999999997643 33578899999999999999999999999999999999999999
Q ss_pred ChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-----
Q 002186 772 NLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----- 842 (955)
Q Consensus 772 sL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~----- 842 (955)
|+.+.++. .++......|.+++.+||.|||++ +-||||||+.|||||.+|.+|++|||.+........
T Consensus 110 S~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~r 186 (516)
T KOG0582|consen 110 SLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTR 186 (516)
T ss_pred cHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEe
Confidence 99999986 345566778899999999999999 999999999999999999999999998643322211
Q ss_pred -CCcccccccCchhhhh--ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccc---cCC--CCc
Q 002186 843 -SFPAKIAWTESGEFYN--AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE---VGS--SSS 914 (955)
Q Consensus 843 -~~~~~~~~~~~~e~~~--~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~ 914 (955)
.+-.+++++++||+.. -..|+.|+|||||||...||++|..||..-.+.. ..+..+-...+ ... .+.
T Consensus 187 f~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk-----vLl~tLqn~pp~~~t~~~~~d~ 261 (516)
T KOG0582|consen 187 FNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK-----VLLLTLQNDPPTLLTSGLDKDE 261 (516)
T ss_pred eccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH-----HHHHHhcCCCCCcccccCChHH
Confidence 1123566778888843 3469999999999999999999999997432211 11111111110 000 011
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 915 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 915 ~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.......+.+++..|++.||++|||++++++.
T Consensus 262 ~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 262 DKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred hhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 12234578889999999999999999999863
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=320.34 Aligned_cols=235 Identities=16% Similarity=0.167 Sum_probs=188.4
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||+||.++ ..+|+.+|+|++++.. .+.+....|..+|.+++||.||++.-.+++++..|+|
T Consensus 26 dF~--~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 26 DFE--ILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hee--eeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 477 88999999999999998 4689999999998642 2355678899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhcCCCH--HHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc--
Q 002186 765 YDYLPNGNLSEKIRTKRDW--AAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA-- 840 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~~~~~--~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~-- 840 (955)
+||+.||+|.-+|.++..+ .+..-++..|+.||.|||+. +|||||+||+|||||.+|+++++|||+++..-..
T Consensus 104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence 9999999999999875544 44566888999999999999 9999999999999999999999999999854332
Q ss_pred CCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 841 DGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 841 ~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
....-++++.|++||+.....++..+|.||+||++|||+||.+||....... ....+........+.. ...
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~------~~~~I~~~k~~~~p~~---ls~ 251 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK------MYDKILKGKLPLPPGY---LSE 251 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH------HHHHHhcCcCCCCCcc---CCH
Confidence 2222347778999999999999999999999999999999999998543211 1122222210111111 224
Q ss_pred HHHHHHHHccCCCCCCCC
Q 002186 921 LVLDVALLCTRSTPSDRP 938 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RP 938 (955)
++.+++...+..||++|-
T Consensus 252 ~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 252 EARDLLKKLLKRDPRQRL 269 (357)
T ss_pred HHHHHHHHHhccCHHHhc
Confidence 456777778899999995
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=343.84 Aligned_cols=247 Identities=20% Similarity=0.241 Sum_probs=189.3
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcC-CeeEEE
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR-HQAYLL 764 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~-~~~~lv 764 (955)
..+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|++++.++ +|||||+++|+|... +..++|
T Consensus 11 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv 90 (338)
T cd05102 11 LGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVI 90 (338)
T ss_pred eeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEE
Confidence 678899999999999963 356789999997532 2345688899999999 899999999998764 468999
Q ss_pred EeecCCCChhHHhhcC----------------------------------------------------------------
Q 002186 765 YDYLPNGNLSEKIRTK---------------------------------------------------------------- 780 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~~---------------------------------------------------------------- 780 (955)
|||+++|+|.+++...
T Consensus 91 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (338)
T cd05102 91 VEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSP 170 (338)
T ss_pred EecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCC
Confidence 9999999999998641
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC----CcccccccCchhh
Q 002186 781 RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEF 856 (955)
Q Consensus 781 ~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~ 856 (955)
+++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ .......|.+||+
T Consensus 171 l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 247 (338)
T cd05102 171 LTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPES 247 (338)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHH
Confidence 45667788999999999999998 9999999999999999999999999998754322111 1112234678898
Q ss_pred hhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCC
Q 002186 857 YNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPS 935 (955)
Q Consensus 857 ~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~ 935 (955)
.....++.++|||||||++|||+| |..||....... ... ....+......+ ......+.+++.+||+.||+
T Consensus 248 ~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~~~---~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dp~ 319 (338)
T cd05102 248 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--EFC---QRLKDGTRMRAP---ENATPEIYRIMLACWQGDPK 319 (338)
T ss_pred hhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--HHH---HHHhcCCCCCCC---CCCCHHHHHHHHHHccCChh
Confidence 888888999999999999999997 888876432111 000 011111101101 12234677899999999999
Q ss_pred CCCCHHHHHHHhhccCC
Q 002186 936 DRPSMEEALKLLSGLKP 952 (955)
Q Consensus 936 ~RPt~~ev~~~L~~~~~ 952 (955)
+|||+.|+++.|+++..
T Consensus 320 ~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 320 ERPTFSALVEILGDLLQ 336 (338)
T ss_pred hCcCHHHHHHHHHHHHh
Confidence 99999999999987654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=330.74 Aligned_cols=241 Identities=19% Similarity=0.214 Sum_probs=191.3
Q ss_pred cccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecc----cchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWG----ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~----~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 764 (955)
|. ..+.+|+|+|++||+|+ ..+++.+|||++.+. ....+-+..|-++|.++ .||-||+|+--|++....|+|
T Consensus 75 F~--Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 75 FK--FGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred cc--hhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 66 77899999999999998 568999999999753 22334456777888888 899999999999999999999
Q ss_pred EeecCCCChhHHhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~~~--~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
+||+++|+|.++|++.. +......++.+|+.|++|||+. +||||||||+|||+|+||++||+|||-|+.......
T Consensus 153 Le~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~ 229 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQK 229 (604)
T ss_pred EEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCChhhc
Confidence 99999999999999854 4445567899999999999999 999999999999999999999999999887543221
Q ss_pred C-----------C----cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccc
Q 002186 843 S-----------F----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN 907 (955)
Q Consensus 843 ~-----------~----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (955)
. . -.+++.|.+||+......+..+|+|+||||+|.|+.|++||.+.... ... ..+..-.
T Consensus 230 ~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney---liF---qkI~~l~ 303 (604)
T KOG0592|consen 230 SQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY---LIF---QKIQALD 303 (604)
T ss_pred cccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH---HHH---HHHHHhc
Confidence 1 1 12677788999999999999999999999999999999999865432 111 1111111
Q ss_pred ccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 908 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...++.. .+.+.+++.+.+..||.+|+|.+|+-++
T Consensus 304 -y~fp~~f---p~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 304 -YEFPEGF---PEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred -ccCCCCC---CHHHHHHHHHHHccCccccccHHHHhhC
Confidence 1111112 2445677777888999999999888654
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=362.01 Aligned_cols=246 Identities=20% Similarity=0.284 Sum_probs=195.6
Q ss_pred hhhhccCCCCCceEEEeCC--CC----cEEEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVLP--TG----ITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~--~g----~~vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
....||+|.||.||+|+.. +| ..||||.++.. .+...+|.+|..+|++++|||||+++|+|.+....+|++|
T Consensus 696 l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~le 775 (1025)
T KOG1095|consen 696 LLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLE 775 (1025)
T ss_pred eeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEeh
Confidence 5567999999999999853 34 35999999864 4457789999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcC---------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 767 YLPNGNLSEKIRTK---------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 767 y~~~gsL~~~l~~~---------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
||++|||..+|++. +...+-+.++.|||+|+.||++. ++|||||.++|+||+....+||+|||+|+..
T Consensus 776 yM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGlArDi 852 (1025)
T KOG1095|consen 776 YMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGLARDI 852 (1025)
T ss_pred hcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccchhHhh
Confidence 99999999999873 35667789999999999999999 9999999999999999999999999999843
Q ss_pred cccC-----CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCC
Q 002186 838 QLAD-----GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 838 ~~~~-----~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
.... +.....+. +++||......++.|+|||||||++||++|.+.+++.+.+..+... .......+..+
T Consensus 853 y~~~yyr~~~~a~lPvk-Wm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~-----~~~~ggRL~~P 926 (1025)
T KOG1095|consen 853 YDKDYYRKHGEAMLPVK-WMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL-----DVLEGGRLDPP 926 (1025)
T ss_pred hhchheeccCcccccee-cCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH-----HHHhCCccCCC
Confidence 2211 11111344 5678998889999999999999999999997766665444322111 11111112212
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
..+...+.++|..||+.+|++||++..+++++..+.+
T Consensus 927 ---~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 927 ---SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred ---CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 2344567799999999999999999999998877644
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=339.19 Aligned_cols=243 Identities=21% Similarity=0.286 Sum_probs=190.6
Q ss_pred hhhccCCCCCceEEEeCCC--C--cE-EEEEEeecc----cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 696 CEEAARPQSAAGCKAVLPT--G--IT-VSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~--g--~~-vAvK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
...+|+|+||.||+|++.. + .. ||||..+.. .....++..|.++|+.++|||||+++|++......|+|||
T Consensus 162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmE 241 (474)
T KOG0194|consen 162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVME 241 (474)
T ss_pred cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEE
Confidence 3789999999999999643 3 23 899998742 2346789999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC--
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 841 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~-- 841 (955)
+|.||+|.++|++ ..+..++.+++.++|+||+|||+. .+|||||-++|+|++.+..+||+|||+++......
T Consensus 242 l~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~ 318 (474)
T KOG0194|consen 242 LCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMK 318 (474)
T ss_pred ecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCCcceeec
Confidence 9999999999987 378999999999999999999999 99999999999999999999999999986543111
Q ss_pred C-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccc-ccccccCCCCchHHH
Q 002186 842 G-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM-YNENEVGSSSSLQDE 918 (955)
Q Consensus 842 ~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 918 (955)
. .....+.| .+||......+++++|||||||++||+.+ |..|+.+-... +....+ ........+...+
T Consensus 319 ~~~~klPirW-LAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~------~v~~kI~~~~~r~~~~~~~p-- 389 (474)
T KOG0194|consen 319 KFLKKLPIRW-LAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY------EVKAKIVKNGYRMPIPSKTP-- 389 (474)
T ss_pred cccccCccee-cChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH------HHHHHHHhcCccCCCCCCCH--
Confidence 1 11234554 56788888899999999999999999999 66666543221 111111 1111111122223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
..+..++.+||..||++||||.++.+.++.+.
T Consensus 390 -~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~ 421 (474)
T KOG0194|consen 390 -KELAKVMKQCWKKDPEDRPTMSTIKKKLEALE 421 (474)
T ss_pred -HHHHHHHHHhccCChhhccCHHHHHHHHHHHH
Confidence 34556667999999999999999999988654
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=305.66 Aligned_cols=254 Identities=19% Similarity=0.213 Sum_probs=191.0
Q ss_pred HhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccch---HHHHHHHHHHHhccCCCCceeEeEEEEc--CCe
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQ 760 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~ 760 (955)
-.+.|+ ..+.|++|+||.||+|+. .|++.||+|+++..... .-.-.+||.+|.+++|||||.+..+... -+.
T Consensus 74 sv~efe--~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~ 151 (419)
T KOG0663|consen 74 SVEEFE--KLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDK 151 (419)
T ss_pred cHHHHH--HHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccce
Confidence 344576 899999999999999996 47899999999764422 1134688999999999999999988764 457
Q ss_pred eEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
+|||||||+. ||..++.. .....+.+.++.|+.+|++|||++ -|+|||+|++|+|+...|.+||+|||+|+.+
T Consensus 152 iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhh
Confidence 9999999986 88888875 446677889999999999999999 9999999999999999999999999999987
Q ss_pred cccCCCCc--ccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cccccccccccc----
Q 002186 838 QLADGSFP--AKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLGEMYNENEV---- 909 (955)
Q Consensus 838 ~~~~~~~~--~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~---- 909 (955)
.......+ .-+.||.+||..-+ ..|++.+|+||+|||+.||+++++.|.+...+.+.... ..++..-+..|.
T Consensus 228 gsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 228 GSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred cCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccc
Confidence 65533322 25779999997755 56899999999999999999998887754332211100 000000000000
Q ss_pred -------CCCCc--------hHH--HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 910 -------GSSSS--------LQD--EIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 910 -------~~~~~--------~~~--~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..+.. ... ......+++-..+..||++|-|++|.++.
T Consensus 308 lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 308 LPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred cchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 00000 001 22456677778889999999999999863
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=327.61 Aligned_cols=237 Identities=16% Similarity=0.190 Sum_probs=194.5
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|.||.||||+.+ +++.||+|.+.+... +.+...+|++++++++|||||.++++|++..++++|.|||.+
T Consensus 6 v~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g 85 (808)
T KOG0597|consen 6 VYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG 85 (808)
T ss_pred HHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh
Confidence 7789999999999999964 789999999976432 355688999999999999999999999999999999999976
Q ss_pred CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Ccc
Q 002186 771 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 846 (955)
Q Consensus 771 gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~ 846 (955)
+|..+|.. .++......|+.+++.||.|||+. +|+|||+||+|||++..+.+|++|||+|+.......- ...
T Consensus 86 -~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsik 161 (808)
T KOG0597|consen 86 -DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIK 161 (808)
T ss_pred -hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccCceeeeecc
Confidence 99999975 667888899999999999999999 9999999999999999999999999999875432211 122
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
+++.|++||.+.+..++..+|.||+|||+||+++|++||..... ...+..+..+. +..+ ......+..++
T Consensus 162 GtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si------~~Lv~~I~~d~-v~~p---~~~S~~f~nfl 231 (808)
T KOG0597|consen 162 GTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI------TQLVKSILKDP-VKPP---STASSSFVNFL 231 (808)
T ss_pred CcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH------HHHHHHHhcCC-CCCc---ccccHHHHHHH
Confidence 67889999999999999999999999999999999999974321 11222222222 1111 13445567777
Q ss_pred HHccCCCCCCCCCHHHHHH
Q 002186 927 LLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~ 945 (955)
.-.+.+||.+|-|-.+++.
T Consensus 232 ~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 232 QGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HHHhhcChhhcccHHHHhc
Confidence 7788999999999887764
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=330.86 Aligned_cols=239 Identities=20% Similarity=0.199 Sum_probs=192.4
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecc----c--chHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWG----A--TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~----~--~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~e 766 (955)
....+|+|.||+||.|. ..+|..||||.++.. . ...+.+.+|+.++++++ ||||++++.++......|+|||
T Consensus 21 ~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmE 100 (370)
T KOG0583|consen 21 LGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVME 100 (370)
T ss_pred eeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEE
Confidence 77889999999999997 458899999977543 1 12445678999999999 9999999999999999999999
Q ss_pred ecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC-CCceECccccccccc-c-cC
Q 002186 767 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQ-L-AD 841 (955)
Q Consensus 767 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~-~~~ki~DfGl~~~~~-~-~~ 841 (955)
||.+|+|.+++.+ .+.......++.|++.|++|+|+. +|+||||||+|||+|.+ +++||+|||++.... . ..
T Consensus 101 y~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~ 177 (370)
T KOG0583|consen 101 YCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGL 177 (370)
T ss_pred ecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCc
Confidence 9999999999976 445667788999999999999999 99999999999999999 999999999998763 2 22
Q ss_pred CCCcccccccCchhhhhccC-Cc-ccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 GSFPAKIAWTESGEFYNAMK-EE-MYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~~~~-~~-~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
-....+.+.|++||++.+.. |+ .++||||+||+||.|++|+.||.+..... ....+.... ...+.... .
T Consensus 178 l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~------l~~ki~~~~-~~~p~~~~--S 248 (370)
T KOG0583|consen 178 LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN------LYRKIRKGE-FKIPSYLL--S 248 (370)
T ss_pred ccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH------HHHHHhcCC-ccCCCCcC--C
Confidence 23344777799999998866 64 77999999999999999999998632111 111111111 11111111 5
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.++..++.+|+..||.+|+|+.||++
T Consensus 249 ~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 249 PEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 66788999999999999999999983
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=329.29 Aligned_cols=249 Identities=20% Similarity=0.230 Sum_probs=186.2
Q ss_pred hhhhccCCCCCceEEEeCC-----------------CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEE
Q 002186 695 ECEEAARPQSAAGCKAVLP-----------------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFC 755 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-----------------~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~ 755 (955)
..+.||+|+||.||+|... ++..||||.+.... .....+.+|++++++++|||||+++|++
T Consensus 9 ~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 88 (304)
T cd05096 9 FKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVC 88 (304)
T ss_pred eeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE
Confidence 6678999999999999742 34579999987532 2345788999999999999999999999
Q ss_pred EcCCeeEEEEeecCCCChhHHhhc---------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCC
Q 002186 756 YNRHQAYLLYDYLPNGNLSEKIRT---------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLK 814 (955)
Q Consensus 756 ~~~~~~~lv~ey~~~gsL~~~l~~---------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk 814 (955)
.+.+..++||||+++|+|.+++.. ..+|.+...++.|++.||+|||+. +|+|||||
T Consensus 89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH~dlk 165 (304)
T cd05096 89 VDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVHRDLA 165 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---CccccCcc
Confidence 999999999999999999998854 135677889999999999999998 99999999
Q ss_pred CCCeeeCCCCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhC--CCCCCCC
Q 002186 815 ASNIVFDENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN--GRLTNAG 888 (955)
Q Consensus 815 ~~NiLl~~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg--~~p~~~~ 888 (955)
|+||+++.++.+||+|||+++........ .......|.+||+.....++.++|||||||++|||+++ ..|+...
T Consensus 166 p~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 245 (304)
T cd05096 166 TRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGEL 245 (304)
T ss_pred hhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcC
Confidence 99999999999999999998754322111 11122346788988877899999999999999999975 4455432
Q ss_pred CCCCCccccccccccccccccC-CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 889 SSLQNKPIDGLLGEMYNENEVG-SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
.... .. ............. .....+.....+.+++.+||+.||++||||+||.+.|++
T Consensus 246 ~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 246 TDEQ--VI-ENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CHHH--HH-HHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 1110 00 0000000000000 000011223467889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=341.57 Aligned_cols=471 Identities=25% Similarity=0.376 Sum_probs=352.8
Q ss_pred EEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCC
Q 002186 80 INLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159 (955)
Q Consensus 80 l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N 159 (955)
+.++.+.+.- +.+.+.+ +..+++|++++|.++ ..|++++.+.+++.|+.|+|+++ .+|..++++.+|+.||.++|
T Consensus 50 lils~N~l~~-l~~dl~n--L~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n 124 (565)
T KOG0472|consen 50 LILSHNDLEV-LREDLKN--LACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSN 124 (565)
T ss_pred hhhccCchhh-ccHhhhc--ccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccc
Confidence 3444444432 2333444 778999999999998 78889999999999999999998 78999999999999999999
Q ss_pred CCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCc
Q 002186 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPW 239 (955)
Q Consensus 160 ~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~ 239 (955)
.+. .+|++++.+..|..|+..+|+++ ..|+.++++.+|..|++.+|++....|..+. ++.|+++|...|.+. .+|.
T Consensus 125 ~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~ 200 (565)
T KOG0472|consen 125 ELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPP 200 (565)
T ss_pred cee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCCh
Confidence 998 68899999999999999999998 6788999999999999999999866665555 999999999988765 7899
Q ss_pred cccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCcc-CcCCCccCEEEccCCCCCCCCCcccCCCCC
Q 002186 240 QLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKN 318 (955)
Q Consensus 240 ~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 318 (955)
.++.|.+|..|++..|.+. .+| +|..++.|.+|+++.|++.- +|.+ ...+.++..|||.+|++. ..|+.+.-+.+
T Consensus 201 ~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~-lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrs 276 (565)
T KOG0472|consen 201 ELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEM-LPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRS 276 (565)
T ss_pred hhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHh-hHHHHhcccccceeeeccccccc-cCchHHHHhhh
Confidence 9999999999999999998 566 89999999999999999984 5555 458999999999999998 68999999999
Q ss_pred CcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCC--CCCeee-------cCCC----cccccCCCCC
Q 002186 319 LRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS--KLRWVD-------VSTN----NFNGSIPPDI 385 (955)
Q Consensus 319 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~--~L~~L~-------ls~N----~l~g~ip~~~ 385 (955)
|++||+|+|.+++ +|.+++++ .|+.|-+.+|.+...--+.+.+-+ -|+||. +|.- .=.+..|.+.
T Consensus 277 L~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~ 354 (565)
T KOG0472|consen 277 LERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSES 354 (565)
T ss_pred hhhhcccCCcccc-CCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCc
Confidence 9999999999995 78889999 999999999988532111110000 011110 0000 0001111111
Q ss_pred ----CCCCccceeeccCCCCCCCCCcCccCC--CCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhh
Q 002186 386 ----CSGGVLFKLILFSNNFTGSLSPSLSNC--SSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQ 459 (955)
Q Consensus 386 ----~~~~~l~~l~l~~n~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~ 459 (955)
......+.|+++.-+++......|..- .-.+..+++.|++. ++|..+..+..+.+.-+..|+..+-+|..++.
T Consensus 355 ~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~ 433 (565)
T KOG0472|consen 355 FPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQ 433 (565)
T ss_pred ccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHh
Confidence 122345556666666654333333221 12566777777777 66666666555544333333344467777777
Q ss_pred ccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCC-CcCCccceEeccccccccccCCCCCccccccee
Q 002186 460 ASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPF-KSCKSISVIESHMNNLSGTIPESVSNCVELERI 538 (955)
Q Consensus 460 ~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~-~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L 538 (955)
+++|..|++++|. + ..+|..++.+..||.++++.|.|. .+|.+ ..+..++.+-.+.|++...-|+.+.++.+|..|
T Consensus 434 l~kLt~L~L~NN~-L-n~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tL 510 (565)
T KOG0472|consen 434 LQKLTFLDLSNNL-L-NDLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTL 510 (565)
T ss_pred hhcceeeecccch-h-hhcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhccee
Confidence 7777777777772 2 456777777777788888777654 34544 344556666667777765555668899999999
Q ss_pred eeccccccccchhhhcCCCCCcEEECCCCCCc
Q 002186 539 DLANNKLIGSIPEVLARLPVLGVLDLSHNSLS 570 (955)
Q Consensus 539 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 570 (955)
||.+|.+. .+|..++++.+|+.|+|++|.|.
T Consensus 511 DL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 511 DLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 99999987 77888999999999999999998
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=293.33 Aligned_cols=243 Identities=16% Similarity=0.214 Sum_probs=197.2
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+.|+ ....+|+|.||.||.|+ ..++..||+|++.+.+- -..++.+|+++-+.++||||.+++||+.+....||
T Consensus 22 ~dfe--igr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 22 DDFE--IGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred hhcc--ccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 3477 88899999999999998 45788999999976432 25678999999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
++||.++|++...|.. +.+......++.|+|.|+.|+|.. .||||||||+|+|++.++..|++|||.+.....
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~ 176 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 176 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecCC
Confidence 9999999999999983 345566678999999999999998 999999999999999999999999999876543
Q ss_pred cCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 840 ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 840 ~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
....+-+++.-|-+||..++...+.++|+|++||+.||++.|.+||.... .. +...++..-. ...++ ...
T Consensus 177 ~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--~~----etYkrI~k~~-~~~p~---~is 246 (281)
T KOG0580|consen 177 NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--HS----ETYKRIRKVD-LKFPS---TIS 246 (281)
T ss_pred CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--hH----HHHHHHHHcc-ccCCc---ccC
Confidence 33334445566889999999999999999999999999999999997432 11 1111111111 11111 123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..+.+++.+|+..+|.+|.+..||+.+
T Consensus 247 ~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 247 GGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred hhHHHHHHHHhccCccccccHHHHhhh
Confidence 456688999999999999999999864
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=314.64 Aligned_cols=247 Identities=21% Similarity=0.229 Sum_probs=183.9
Q ss_pred cchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----eeEEEEe
Q 002186 693 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-----QAYLLYD 766 (955)
Q Consensus 693 ~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~lv~e 766 (955)
+...+++|.|+||.||+|++ .+++.||||+...+.. .-.+|+++|++++|||||++.-+|.... ...+|||
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVle 102 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLE 102 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC---cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHH
Confidence 34788999999999999995 5689999999864432 2346899999999999999999887432 3468999
Q ss_pred ecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC-CCceECcccccccccc
Q 002186 767 YLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQL 839 (955)
Q Consensus 767 y~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~-~~~ki~DfGl~~~~~~ 839 (955)
|||. +|.++++. +.+.-..+-++.|+.+||+|||+. +|+||||||+|+|+|.+ +.+||||||-|+....
T Consensus 103 ymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~ 178 (364)
T KOG0658|consen 103 YMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK 178 (364)
T ss_pred hchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeecc
Confidence 9986 99999983 445555667899999999999998 99999999999999976 8999999999998765
Q ss_pred cCCCCcc-cccccCchhhhh-ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cccc---------------
Q 002186 840 ADGSFPA-KIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLG--------------- 901 (955)
Q Consensus 840 ~~~~~~~-~~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~~--------------- 901 (955)
......- -..+|.|||... +..|+.+.||||.|||+.||+-|++.|.+.....+.... ..++
T Consensus 179 ~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~ 258 (364)
T KOG0658|consen 179 GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYT 258 (364)
T ss_pred CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccc
Confidence 4433222 346788888664 568999999999999999999999888764432211110 0000
Q ss_pred ccccccccCCC--C-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 902 EMYNENEVGSS--S-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 902 ~~~~~~~~~~~--~-~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+...+...... . .......+.++++.++++.+|.+|.++.|++.+
T Consensus 259 ~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 259 EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 00001000000 0 112234567899999999999999999998853
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-36 Score=318.76 Aligned_cols=242 Identities=20% Similarity=0.259 Sum_probs=192.1
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|...++..+|+|.++......+.+.+|++.+++++||||++++++|..++..++||||+++|+|.
T Consensus 8 ~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 87 (256)
T cd05114 8 FMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLL 87 (256)
T ss_pred EeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHH
Confidence 56789999999999999888889999998765555667888999999999999999999999999999999999999999
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---cccc
Q 002186 775 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAKI 848 (955)
Q Consensus 775 ~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~~~~ 848 (955)
++++. ..+|.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||.++......... ....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~ 164 (256)
T cd05114 88 NYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFP 164 (256)
T ss_pred HHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCc
Confidence 99974 368889999999999999999998 99999999999999999999999999886542211111 1112
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
..|.+||......++.++|||||||++|||+| |+.|+....... .............+. .....+.+++.
T Consensus 165 ~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~------~~~~i~~~~~~~~~~---~~~~~~~~li~ 235 (256)
T cd05114 165 VKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE------VVEMISRGFRLYRPK---LASMTVYEVMY 235 (256)
T ss_pred hhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH------HHHHHHCCCCCCCCC---CCCHHHHHHHH
Confidence 23678888887788999999999999999999 777775332111 001111110010011 12245789999
Q ss_pred HccCCCCCCCCCHHHHHHHhh
Q 002186 928 LCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
+||+.+|++||+|+|+++.|.
T Consensus 236 ~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 236 SCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HHccCCcccCcCHHHHHHhhC
Confidence 999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=331.10 Aligned_cols=367 Identities=21% Similarity=0.226 Sum_probs=284.2
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
.-+.||+|+|.++.+-+..|.++++|+.+++.+|.++ .||...+...+|+.|+|.+|.|+..-.+++.-++.|+.||||
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 4567999999999998999999999999999999998 688777777789999999999998878889999999999999
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCC
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~ 261 (955)
.|.++...-.+|..-.++++|+|++|.|+..--..|..+.+|..|.|+.|.++...+..|.++++|+.|||..|.+.-.-
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive 237 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVE 237 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeeh
Confidence 99999665577888889999999999999888888888888888888888888666667777888888888888876433
Q ss_pred CccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCC
Q 002186 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341 (955)
Q Consensus 262 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 341 (955)
--.|..|++|+.|.|..|.+...-...|..+.++++|+|+.|+++..-..|+.+++.|+.|++|+|.+...-++.+.-.+
T Consensus 238 ~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftq 317 (873)
T KOG4194|consen 238 GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQ 317 (873)
T ss_pred hhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcc
Confidence 44577788888888888888877777788888888888888888877777888888888888888888877777777778
Q ss_pred CccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCc---CccCCCCCcEE
Q 002186 342 SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSP---SLSNCSSLVRL 418 (955)
Q Consensus 342 ~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~---~~~~l~~L~~L 418 (955)
+|+.|+|++|+++...+..|..++.|+.|+|++|++...--..+-.+.+|++|+|++|.+++.+.+ .|.++++|+.|
T Consensus 318 kL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL 397 (873)
T KOG4194|consen 318 KLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKL 397 (873)
T ss_pred cceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhe
Confidence 888888888888877777788888888888888877633222333445566666666666655443 34556666666
Q ss_pred ECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCC
Q 002186 419 RLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSN 470 (955)
Q Consensus 419 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~ 470 (955)
+|.+|++....-..|.+++.|+.|||.+|.+...-|..|..+ .|+.|.++.
T Consensus 398 ~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 398 RLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred eecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcc
Confidence 666666664444556666666666666666665556666555 555555543
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=304.27 Aligned_cols=252 Identities=21% Similarity=0.252 Sum_probs=193.8
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCC-ceeEeEEEEcCC------eeEE
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKN-LIRLLGFCYNRH------QAYL 763 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~n-iv~l~g~~~~~~------~~~l 763 (955)
..+++|+|+||+||||+ ..+|+.||+|++..... ......+|+.++++++|+| ||++++++.+.+ ..++
T Consensus 15 ~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~l 94 (323)
T KOG0594|consen 15 KVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYL 94 (323)
T ss_pred HHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEE
Confidence 78889999999999999 46899999999976533 2445678999999999999 999999999877 7899
Q ss_pred EEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 764 LYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
|+||+.. +|.+++.. ..+-...+.++.|+.+|++|||++ +|+||||||+|||+++++.+|++|||+|+..
T Consensus 95 vfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~ 170 (323)
T KOG0594|consen 95 VFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLARAF 170 (323)
T ss_pred EEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchHHHh
Confidence 9999964 99998865 234456789999999999999999 9999999999999999999999999999876
Q ss_pred cccCCCC--cccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCC---------------CCcccccc
Q 002186 838 QLADGSF--PAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSL---------------QNKPIDGL 899 (955)
Q Consensus 838 ~~~~~~~--~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~---------------~~~~~~~~ 899 (955)
....... ...+-||.+||+..+. .|++.+||||+|||+.||++++..|.+..+. ..|+....
T Consensus 171 ~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~ 250 (323)
T KOG0594|consen 171 SIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSS 250 (323)
T ss_pred cCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccc
Confidence 5333322 2267789999987665 7899999999999999999988877754321 22322211
Q ss_pred ccccccccccCC-CCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhcc
Q 002186 900 LGEMYNENEVGS-SSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGL 950 (955)
Q Consensus 900 ~~~~~~~~~~~~-~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~ 950 (955)
..+.-.+.+... .... +.......+++.+|++.+|++|.|++.++.+ +..+
T Consensus 251 ~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 251 LPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred cccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 111100000000 0111 1112467899999999999999999999976 5544
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=335.19 Aligned_cols=247 Identities=18% Similarity=0.222 Sum_probs=189.6
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCe
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~ 760 (955)
+|. ..+.||+|+||.||+|+. .++..||||+++... ...+.+.+|+++++.+ +|||||+++|+|.+.+.
T Consensus 36 ~~~--~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 36 RLS--FGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred Hee--hhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 355 789999999999999962 356789999997532 2345678899999999 89999999999999999
Q ss_pred eEEEEeecCCCChhHHhhc-------------------------------------------------------------
Q 002186 761 AYLLYDYLPNGNLSEKIRT------------------------------------------------------------- 779 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~------------------------------------------------------------- 779 (955)
.++|||||++|+|.++++.
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999998853
Q ss_pred ----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 780 ----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 780 ----------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
.++|.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 246777889999999999999998 9999999999999999999999999998754322111
Q ss_pred C----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 844 F----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 844 ~----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
. ......|.+||......++.++|||||||++|||+| |..|+........ ....+....... . +. ..
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~--~~~~~~~~~~~~-~--~~---~~ 342 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK--FYKMIKEGYRML-S--PE---CA 342 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH--HHHHHHhCccCC-C--CC---CC
Confidence 1 111223678898888889999999999999999998 6666653211100 000011100000 0 11 11
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
..++.+++.+||+.||++||||+||+++|++
T Consensus 343 ~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 343 PSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 2457789999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-36 Score=335.72 Aligned_cols=248 Identities=16% Similarity=0.215 Sum_probs=190.8
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCe
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~ 760 (955)
+|. ..+.||+|+||.||+|+. .++..||||+++.... ..+.+.+|+++++++ +|||||+++|+|.+.+.
T Consensus 39 ~~~--~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 39 NLQ--FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred Hce--ehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 355 788999999999999872 2456899999975322 345678899999999 89999999999999999
Q ss_pred eEEEEeecCCCChhHHhhc-------------------------------------------------------------
Q 002186 761 AYLLYDYLPNGNLSEKIRT------------------------------------------------------------- 779 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~------------------------------------------------------------- 779 (955)
.++|||||++|+|.++++.
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999999999999998853
Q ss_pred -----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC----
Q 002186 780 -----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---- 844 (955)
Q Consensus 780 -----------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---- 844 (955)
..++.+..+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 145677789999999999999998 99999999999999999999999999987543221111
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
......|++||+.....++.++|||||||++|||+| |+.||........ ............ .+. ....++.
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~--~~~~~~~~~~~~---~~~---~~~~~l~ 345 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK--FYKMVKRGYQMS---RPD---FAPPEIY 345 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH--HHHHHHcccCcc---CCC---CCCHHHH
Confidence 111233678898887889999999999999999997 8888864321110 000010100100 011 1134677
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+++.+||+.||++|||+.||+++|+++
T Consensus 346 ~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 346 SIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=323.08 Aligned_cols=242 Identities=14% Similarity=0.120 Sum_probs=189.8
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|.. .+|+.||||.+.... .....+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05631 4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMN 83 (285)
T ss_pred EEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecC
Confidence 667899999999999985 689999999986532 123456789999999999999999999999999999999999
Q ss_pred CCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-CC
Q 002186 770 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SF 844 (955)
Q Consensus 770 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-~~ 844 (955)
+|+|.+++.. ..++.+...++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........ ..
T Consensus 84 ~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05631 84 GGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG 160 (285)
T ss_pred CCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence 9999988753 357888899999999999999998 999999999999999999999999999876432221 11
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..+...|++||+.....++.++|||||||++|||+||+.||......... ........... . .........+.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~-~---~~~~~~s~~~~~ 234 (285)
T cd05631 161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR--EEVDRRVKEDQ-E---EYSEKFSEDAKS 234 (285)
T ss_pred CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH--HHHHHHhhccc-c---cCCccCCHHHHH
Confidence 22455688899998888999999999999999999999999754321110 00000010100 1 111122345778
Q ss_pred HHHHccCCCCCCCCC-----HHHHHH
Q 002186 925 VALLCTRSTPSDRPS-----MEEALK 945 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt-----~~ev~~ 945 (955)
++.+||+.||++||+ ++|+++
T Consensus 235 li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 235 ICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred HHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 899999999999997 788876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=317.94 Aligned_cols=244 Identities=16% Similarity=0.218 Sum_probs=191.1
Q ss_pred hhhhccCCCCCceEEEeC----CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.||+|+||.||+|.. ..+..||+|.++... ...+.+.+|+..+++++|||||+++|++..++..++||||+
T Consensus 9 ~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 88 (266)
T cd05064 9 IERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYM 88 (266)
T ss_pred EeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeC
Confidence 678899999999999974 246789999987543 23456889999999999999999999999999999999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
++|+|.+++.. ..++.+...++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+.........
T Consensus 89 ~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 165 (266)
T cd05064 89 SNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTT 165 (266)
T ss_pred CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccccccchhcc
Confidence 99999999875 468899999999999999999998 9999999999999999999999999986543221111
Q ss_pred -CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 844 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 844 -~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
.......+.+||......++.++|||||||++||+++ |+.||....... ....+.+... . +........
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~~~~~~~~~---~---~~~~~~~~~ 236 (266)
T cd05064 166 MSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VIKAVEDGFR---L---PAPRNCPNL 236 (266)
T ss_pred cCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHHHCCCC---C---CCCCCCCHH
Confidence 1112234678898888889999999999999999775 888876432110 0001111100 1 111223356
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+.+++.+||+.+|++||+++|+.+.|.++
T Consensus 237 ~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 237 LHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 77899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=321.64 Aligned_cols=249 Identities=21% Similarity=0.281 Sum_probs=194.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..++||+|.||.|-.++...+..||||+++.+.. ..++|.+||++|++++|||||+++|+|..++.+++|+|||++|+
T Consensus 542 ~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGD 621 (807)
T KOG1094|consen 542 FKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGD 621 (807)
T ss_pred hhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCc
Confidence 6789999999999999998889999999987543 36789999999999999999999999999999999999999999
Q ss_pred hhHHhhcCC----CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC-----CC
Q 002186 773 LSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-----GS 843 (955)
Q Consensus 773 L~~~l~~~~----~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~-----~~ 843 (955)
|.+++.+.. +-..-.+|+.|||.||+||.+. .+||||+.++|+|+|.++++||+|||+++.....+ +.
T Consensus 622 LnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr 698 (807)
T KOG1094|consen 622 LNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGR 698 (807)
T ss_pred HHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCceeeecc
Confidence 999998742 2233468999999999999998 99999999999999999999999999998543322 22
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHh--CCCCCCCCCCCCCccccccccccccccccC-CCCchHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT--NGRLTNAGSSLQNKPIDGLLGEMYNENEVG-SSSSLQDEIK 920 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 920 (955)
....+.| ++.|..--.+.++++|||+|||.+||+++ ..+|+..-.+ ....+...++.+..... ....+..+..
T Consensus 699 ~vlpiRw-mawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~---e~vven~~~~~~~~~~~~~l~~P~~cp~ 774 (807)
T KOG1094|consen 699 AVLPIRW-MAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD---EQVVENAGEFFRDQGRQVVLSRPPACPQ 774 (807)
T ss_pred eeeeeee-hhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH---HHHHHhhhhhcCCCCcceeccCCCcCcH
Confidence 2224664 45576666789999999999999999976 5567653221 11111122222221110 0111123445
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+.+++++||..|-++||+++++...|++.
T Consensus 775 ~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 775 GLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 677999999999999999999999988764
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-37 Score=326.87 Aligned_cols=404 Identities=21% Similarity=0.195 Sum_probs=221.9
Q ss_pred CcEEECCCCcCcccCCccccCC--CCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNL--TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
-+.||.+.+.+..+....+..+ +.-+.||+|+|+++...+..|.++++|+.+++..|.++ .+|.......+|+.|+|
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L 132 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDL 132 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEee
Confidence 4567777777653322221111 22344666666666655555666666666666666655 45554444455666666
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~ 260 (955)
.+|.++..-.+++..++.|++||||.|.++...-.++..-. ++++|+|++|.++..
T Consensus 133 ~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~------------------------ni~~L~La~N~It~l 188 (873)
T KOG4194|consen 133 RHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKV------------------------NIKKLNLASNRITTL 188 (873)
T ss_pred eccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCC------------------------CceEEeecccccccc
Confidence 66655544445555555555555555555432222222222 334444444444333
Q ss_pred CCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCC
Q 002186 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (955)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 340 (955)
-...|.++.+|.+|.|+.|.++...+..|.++++|+.|+|..|+|.-.---.|.++++|+.|.|..|.+...-...|..+
T Consensus 189 ~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l 268 (873)
T KOG4194|consen 189 ETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGL 268 (873)
T ss_pred ccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeee
Confidence 33334444444444444444443333334444444444444444432222233344444444444444433333333333
Q ss_pred CCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEEC
Q 002186 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRL 420 (955)
Q Consensus 341 ~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~L 420 (955)
..+++|+|+.|+++..-..++.+ ++.|+.|+++.|.+...-+.++..+++|++|+|
T Consensus 269 ~kme~l~L~~N~l~~vn~g~lfg------------------------Lt~L~~L~lS~NaI~rih~d~WsftqkL~~LdL 324 (873)
T KOG4194|consen 269 EKMEHLNLETNRLQAVNEGWLFG------------------------LTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDL 324 (873)
T ss_pred cccceeecccchhhhhhcccccc------------------------cchhhhhccchhhhheeecchhhhcccceeEec
Confidence 33344444433333333333333 333333333333333344445566677777777
Q ss_pred cCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCC
Q 002186 421 EDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITG 500 (955)
Q Consensus 421 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~ 500 (955)
++|+++...+..|..+..|+.|+|++|.+...-...|..+++|+.|||++| .+++.+..
T Consensus 325 s~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N-~ls~~IED-------------------- 383 (873)
T KOG4194|consen 325 SSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSN-ELSWCIED-------------------- 383 (873)
T ss_pred cccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCC-eEEEEEec--------------------
Confidence 777777666777777777777778777777554555666667777777666 22211110
Q ss_pred CCCCCCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCC
Q 002186 501 NLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSC 580 (955)
Q Consensus 501 ~~p~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 580 (955)
-...|.++++|+.|+|.+|++......+|.+++.|+.|||.+|.|...-|.+|..+
T Consensus 384 ------------------------aa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m 439 (873)
T KOG4194|consen 384 ------------------------AAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM 439 (873)
T ss_pred ------------------------chhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc
Confidence 01235567888888888888886666789999999999999999999999999988
Q ss_pred CCCcEEECCCCcceeccCCcc
Q 002186 581 SSLTVLNVSFNDISGSIPSGK 601 (955)
Q Consensus 581 ~~L~~L~ls~N~l~g~ip~~~ 601 (955)
.|+.|-+..-.|-+.+--.+
T Consensus 440 -~Lk~Lv~nSssflCDCql~W 459 (873)
T KOG4194|consen 440 -ELKELVMNSSSFLCDCQLKW 459 (873)
T ss_pred -hhhhhhhcccceEEeccHHH
Confidence 88888887777666554333
|
|
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=315.69 Aligned_cols=246 Identities=18% Similarity=0.276 Sum_probs=195.9
Q ss_pred cccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 691 FNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
|. ..+++|+|++|.||+|...++..||+|.+.......+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 8 ~~--~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05072 8 IK--LVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAK 85 (261)
T ss_pred eE--EeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCC
Confidence 55 7788999999999999988889999999876555567888999999999999999999999999999999999999
Q ss_pred CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC--
Q 002186 771 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF-- 844 (955)
Q Consensus 771 gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~-- 844 (955)
|+|.++++. ..++.++..++.|+++|++|||+. +++||||||+||+++.++.+|++|||++..........
T Consensus 86 ~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05072 86 GSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 162 (261)
T ss_pred CcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCceeccC
Confidence 999999864 357888899999999999999998 99999999999999999999999999987653321111
Q ss_pred -cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 845 -PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 845 -~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
......|.+||+.....++.++|||||||++|||+| |+.|+....... ... .+..... . +.......++
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~-~~~~~~~---~---~~~~~~~~~~ 233 (261)
T cd05072 163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMS-ALQRGYR---M---PRMENCPDEL 233 (261)
T ss_pred CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHH-HHHcCCC---C---CCCCCCCHHH
Confidence 112234778888887788899999999999999999 777775322110 000 0011110 0 0111223457
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+++.+|+..+|++||+++++.+.|+.+
T Consensus 234 ~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 234 YDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 7899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=308.28 Aligned_cols=248 Identities=22% Similarity=0.296 Sum_probs=190.1
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeec---ccchHHHHHHHHHHHhccCCCCceeEeEEEEc-----CCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEW---GATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-----RHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-----~~~~~lv~ 765 (955)
..+.+|+|+||.|++|+ ..+|+.||||++.. .....+...+|++.|+.++|+|||.+...... -+.+|+|+
T Consensus 26 ~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~ 105 (359)
T KOG0660|consen 26 LIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVF 105 (359)
T ss_pred ccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEeh
Confidence 46789999999999998 46899999999973 23346777899999999999999999998875 24789999
Q ss_pred eecCCCChhHHhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc--C
Q 002186 766 DYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA--D 841 (955)
Q Consensus 766 ey~~~gsL~~~l~~~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~--~ 841 (955)
|+|+ -||...++.. +.-.....+++|+.+||.|+|+. +|+|||+||+|++++.+...||+|||+|+..... .
T Consensus 106 elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~ 181 (359)
T KOG0660|consen 106 ELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFED 181 (359)
T ss_pred hHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeeccccCcc
Confidence 9995 5999999874 44555567889999999999999 9999999999999999999999999999987532 1
Q ss_pred C--CCcccccccCchhhhh-ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-----------------cccc
Q 002186 842 G--SFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-----------------GLLG 901 (955)
Q Consensus 842 ~--~~~~~~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-----------------~~~~ 901 (955)
+ ..-..+.||.+||+.. ...|+..+||||.|||+.||++|++.|.+.+...+.... ..+.
T Consensus 182 ~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar 261 (359)
T KOG0660|consen 182 GFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKAR 261 (359)
T ss_pred cchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHH
Confidence 1 1122678999999764 567899999999999999999999888865543321110 0011
Q ss_pred ccccccc-cCC---CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 902 EMYNENE-VGS---SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 902 ~~~~~~~-~~~---~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..+..-+ .+. ....+......+++..+++..||.+|+|++|++++
T Consensus 262 ~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 262 PYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1111000 000 00112334567889999999999999999999864
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=314.63 Aligned_cols=244 Identities=20% Similarity=0.235 Sum_probs=195.5
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.+|+|++|.||+|...+++.||||.++......+.+.+|++.+++++||||+++++++...+..++||||+++|+|.
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (261)
T cd05068 10 LLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLL 89 (261)
T ss_pred eEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHH
Confidence 67889999999999999888889999999866555677889999999999999999999999999999999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccc---
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK--- 847 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~--- 847 (955)
+++.. ..++.+...++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...........+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 166 (261)
T cd05068 90 EYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKF 166 (261)
T ss_pred HHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcC
Confidence 99964 468999999999999999999998 99999999999999999999999999987654221111111
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||+.....++.++|||||||++|||+| |+.|+....... ... ....... . +........+.+++
T Consensus 167 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~-~~~~~~~---~---~~~~~~~~~~~~li 237 (261)
T cd05068 167 PIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE--VLQ-QVDQGYR---M---PCPPGCPKELYDIM 237 (261)
T ss_pred ceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHH-HHHcCCC---C---CCCCcCCHHHHHHH
Confidence 123678898888888999999999999999999 777775322110 000 0000000 0 01112335678899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhcc
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+|++.||++||+++++.+.|+.+
T Consensus 238 ~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 238 LDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HHHhhcCcccCCCHHHHHHHHhcC
Confidence 999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=324.85 Aligned_cols=191 Identities=17% Similarity=0.199 Sum_probs=164.4
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||++.. .+|..||+|.+.... ...+.+.+|++++++++|||||++++++..++..++||||+++|
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 88 (331)
T cd06649 9 RISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 88 (331)
T ss_pred EEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCC
Confidence 778899999999999995 478999999987542 23457889999999999999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 849 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~ 849 (955)
+|.+++.. ..++.....++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||+++...........+..
T Consensus 89 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~ 166 (331)
T cd06649 89 SLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166 (331)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCc
Confidence 99999975 4577788899999999999999752 6999999999999999999999999998754332222223455
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCC
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 887 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~ 887 (955)
.|.+||+..+..++.++|||||||++|||+||+.||..
T Consensus 167 ~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 167 SYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred CcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 67889998888899999999999999999999999863
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=327.57 Aligned_cols=235 Identities=13% Similarity=0.073 Sum_probs=187.0
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
.||+|+||.||+|.. .+|+.||||+++... .....+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 589999999999985 589999999997532 223456789999999999999999999999999999999999999
Q ss_pred hhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcccc
Q 002186 773 LSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 848 (955)
Q Consensus 773 L~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~ 848 (955)
|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....++
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 158 (323)
T cd05571 82 LFFHLSRERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence 9999865 457888889999999999999998 999999999999999999999999999864322111 112255
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..|.+||......++.++||||+||++|||+||+.||....... ....+.... ...+. .....+.+++.+
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~------~~~~~~~~~-~~~p~---~~~~~~~~li~~ 228 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK------LFELILMEE-IRFPR---TLSPEAKSLLAG 228 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH------HHHHHHcCC-CCCCC---CCCHHHHHHHHH
Confidence 66889999988889999999999999999999999986432110 011111111 11111 223456788889
Q ss_pred ccCCCCCCCC-----CHHHHHH
Q 002186 929 CTRSTPSDRP-----SMEEALK 945 (955)
Q Consensus 929 Cl~~dp~~RP-----t~~ev~~ 945 (955)
||+.||++|| +++|+++
T Consensus 229 ~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 229 LLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HccCCHHHcCCCCCCCHHHHHc
Confidence 9999999999 7998875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=325.50 Aligned_cols=234 Identities=15% Similarity=0.101 Sum_probs=185.1
Q ss_pred ccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 699 AARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 699 ~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
||+|+||.||+|.. .+|+.||||+++... .....+.+|++++++++|||||++++++.+++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999995 478899999997532 2345677899999999999999999999999999999999999999
Q ss_pred hHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccccc
Q 002186 774 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIA 849 (955)
Q Consensus 774 ~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~~ 849 (955)
.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....++.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 999965 467888889999999999999998 999999999999999999999999999875322211 1122456
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
.|.+||...+..++.++||||+||++|||+||+.||...... .......... ...+. .....+.+++.+|
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~------~~~~~~~~~~-~~~~~---~~~~~~~~li~~~ 227 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN------EMYRKILQEP-LRFPD---GFDRDAKDLLIGL 227 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH------HHHHHHHcCC-CCCCC---cCCHHHHHHHHHH
Confidence 688999998888999999999999999999999998743211 1111111111 11111 2234567888999
Q ss_pred cCCCCCCCCC---HHHHHH
Q 002186 930 TRSTPSDRPS---MEEALK 945 (955)
Q Consensus 930 l~~dp~~RPt---~~ev~~ 945 (955)
|+.||++||+ +.|+++
T Consensus 228 L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 228 LSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred cCCCHHHcCCCCCHHHHHc
Confidence 9999999975 566654
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=314.37 Aligned_cols=244 Identities=21% Similarity=0.252 Sum_probs=194.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
..+.||+|++|.||+|.. .+++.||+|.++......+.+.+|++.+++++||||++++++|..++..++||||+++|+|
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (263)
T cd05052 10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 89 (263)
T ss_pred EeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcH
Confidence 667899999999999985 4688999999876655567788999999999999999999999999999999999999999
Q ss_pred hHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCc---c
Q 002186 774 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP---A 846 (955)
Q Consensus 774 ~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~---~ 846 (955)
.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++|||++........... .
T Consensus 90 ~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~ 166 (263)
T cd05052 90 LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 166 (263)
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCC
Confidence 999864 367888999999999999999998 999999999999999999999999999875433211111 1
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
....|.+||+..+..++.++|||||||++|||+| |..|+..... ... .......... +........+.++
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-~~~--~~~~~~~~~~------~~~~~~~~~~~~l 237 (263)
T cd05052 167 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQV--YELLEKGYRM------ERPEGCPPKVYEL 237 (263)
T ss_pred CccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHH--HHHHHCCCCC------CCCCCCCHHHHHH
Confidence 1223778898888888999999999999999998 7777753221 110 0011111111 0111223557789
Q ss_pred HHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 926 ALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+.+||+.||++|||++|++++|+.+
T Consensus 238 i~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 238 MRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHccCCcccCCCHHHHHHHHHhh
Confidence 9999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-36 Score=320.35 Aligned_cols=241 Identities=23% Similarity=0.346 Sum_probs=181.0
Q ss_pred hhhhccCCCCCceEEEeCC-----CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVLP-----TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-----~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||.|.||.||+|+.. .+..||||.++.... ..+.+.+|++.+++++||||++++|+|...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3467999999999999865 367899999965322 367889999999999999999999999988889999999
Q ss_pred cCCCChhHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC--
Q 002186 768 LPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 841 (955)
Q Consensus 768 ~~~gsL~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~-- 841 (955)
|++|+|.++|+.. .++.++..|+.|+|+||+|||+. +|+|+||+++||+++.++.+||+|||+++......
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence 9999999999874 68999999999999999999998 99999999999999999999999999987652111
Q ss_pred --CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 842 --GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 842 --~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
.........+.+||......++.++||||||+++|||+| |+.|+.... .. .....+.+....... ...
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~-~~-----~~~~~~~~~~~~~~~---~~~ 230 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD-NE-----EIIEKLKQGQRLPIP---DNC 230 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC-HH-----HHHHHHHTTEETTSB---TTS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc-cc-----cccccccccccceec---cch
Confidence 111112223568898888889999999999999999999 566654321 11 111111111111111 122
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKLL 947 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L 947 (955)
...+.+++..||+.||++||||+|+++.|
T Consensus 231 ~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 231 PKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp BHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 34567889999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=292.69 Aligned_cols=251 Identities=21% Similarity=0.240 Sum_probs=200.3
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccch---------HHHHHHHHHHHhcc-CCCCceeEeE
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATR---------IKIVSEFITRIGTV-RHKNLIRLLG 753 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~---------~~~~~~e~~~l~~l-~H~niv~l~g 753 (955)
++...++. ..+++|+|..++|-++. .++|.++|||++...... .+.-.+|+.+|+++ .||+|+++.+
T Consensus 13 ~~fy~~y~--pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D 90 (411)
T KOG0599|consen 13 KGFYAKYE--PKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD 90 (411)
T ss_pred hhHHhhcC--hHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence 44455565 88999999999999887 468999999999753221 33456789999987 5999999999
Q ss_pred EEEcCCeeEEEEeecCCCChhHHhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcc
Q 002186 754 FCYNRHQAYLLYDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 831 (955)
Q Consensus 754 ~~~~~~~~~lv~ey~~~gsL~~~l~~~~--~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~Df 831 (955)
+|+++..+++|+|.|+.|.|.|+|.... +..+..+|++|+.+|++|||.. .|||||+||+|||+|++.++||+||
T Consensus 91 ~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 91 VYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred eccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecc
Confidence 9999999999999999999999998754 5556678999999999999999 9999999999999999999999999
Q ss_pred cccccccccCCC-CcccccccCchhhhh------ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccc
Q 002186 832 GFKYLTQLADGS-FPAKIAWTESGEFYN------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 832 Gl~~~~~~~~~~-~~~~~~~~~~~e~~~------~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
|++........- ..++++.|.+||... ...|+..+|+|+.|||||.++.|.+||+....+. +++.+.
T Consensus 168 GFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml------MLR~Im 241 (411)
T KOG0599|consen 168 GFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML------MLRMIM 241 (411)
T ss_pred ceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH------HHHHHH
Confidence 999876544322 234777788887654 2457777999999999999999999997432110 111222
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....-..++.+.+......+++.+|++.||.+|-|++|++++
T Consensus 242 eGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 242 EGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred hcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 222122356677778888999999999999999999999863
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=313.72 Aligned_cols=240 Identities=19% Similarity=0.214 Sum_probs=194.9
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|.||.||||. ..+++.||+|.+..... ..+..++|+.+++..+|+||.+++|.+......+++||||.+|
T Consensus 17 ~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gG 96 (467)
T KOG0201|consen 17 KLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGG 96 (467)
T ss_pred cchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCc
Confidence 66899999999999999 46899999999986543 4567889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Cccc
Q 002186 772 NLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAK 847 (955)
Q Consensus 772 sL~~~l~~~~--~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~~ 847 (955)
++.+.++... +.....-|.+++..|+.|+|.+ +.+|||||+.|||+..++.+|++|||.+......... .-.+
T Consensus 97 sv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvG 173 (467)
T KOG0201|consen 97 SVLDLLKSGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVG 173 (467)
T ss_pred chhhhhccCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhccccccc
Confidence 9999998633 4445566888999999999999 9999999999999999999999999998654433222 2237
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
++++++||+.....|+.|+||||+|+..+||++|.+|+..-.+.. . --.+.....+... ....+.+.+++.
T Consensus 174 TPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr-----v--lflIpk~~PP~L~--~~~S~~~kEFV~ 244 (467)
T KOG0201|consen 174 TPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR-----V--LFLIPKSAPPRLD--GDFSPPFKEFVE 244 (467)
T ss_pred cccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce-----E--EEeccCCCCCccc--cccCHHHHHHHH
Confidence 888999999998899999999999999999999999876433211 1 1111111111011 144566788888
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 002186 928 LCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~ 946 (955)
.|+..||+.||++.+++++
T Consensus 245 ~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 245 ACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred HHhhcCcccCcCHHHHhhh
Confidence 9999999999999999864
|
|
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=311.48 Aligned_cols=242 Identities=19% Similarity=0.235 Sum_probs=191.9
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.+|+|+||.||+|...++..+|||.+.......+.+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 87 (256)
T cd05059 8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLL 87 (256)
T ss_pred hhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHH
Confidence 77889999999999999888888999998765555667888999999999999999999999999999999999999999
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCcc---cc
Q 002186 775 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA---KI 848 (955)
Q Consensus 775 ~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~---~~ 848 (955)
++++. ..++.....++.|+++|++|||+. +|+||||||+||+++.++.+|++|||+++........... ..
T Consensus 88 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 164 (256)
T cd05059 88 NYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFP 164 (256)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCC
Confidence 99964 357888999999999999999998 9999999999999999999999999998654322111111 11
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
..|.+||+.....++.++|||||||++|||+| |+.|+........ ......... ...+ .....++.+++.
T Consensus 165 ~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~~~~~~~~~---~~~~---~~~~~~~~~li~ 235 (256)
T cd05059 165 VKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV---VESVSAGYR---LYRP---KLAPTEVYTIMY 235 (256)
T ss_pred ccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH---HHHHHcCCc---CCCC---CCCCHHHHHHHH
Confidence 23678898888888999999999999999999 6777653221110 000111100 0001 112356789999
Q ss_pred HccCCCCCCCCCHHHHHHHhh
Q 002186 928 LCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
+||..+|++||||+|+++.|.
T Consensus 236 ~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 236 SCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred HHhcCChhhCcCHHHHHHHhC
Confidence 999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=327.35 Aligned_cols=246 Identities=15% Similarity=0.095 Sum_probs=192.6
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|++++.+++|||||++++++.+.+..|+||||++
T Consensus 5 ~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~ 84 (333)
T cd05600 5 ILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVP 84 (333)
T ss_pred EEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCC
Confidence 6788999999999999964 68999999997532 234567889999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccc
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 847 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~ 847 (955)
+|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ....+
T Consensus 85 g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~-~~~~g 160 (333)
T cd05600 85 GGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYA-NSVVG 160 (333)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccccc-CCccc
Confidence 9999999975 457788888999999999999998 99999999999999999999999999987544321 12234
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
+..|.+||+..+..++.++|||||||++|||+||+.||...................... .. .........++.+++.
T Consensus 161 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~-~~~~~~~s~~~~~li~ 238 (333)
T cd05600 161 SPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRP-VY-DDPRFNLSDEAWDLIT 238 (333)
T ss_pred CccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCC-CC-CccccccCHHHHHHHH
Confidence 556889999888889999999999999999999999987432211000000000111100 00 0000123456778889
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 002186 928 LCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~ 946 (955)
+|+..+|++||+++|++++
T Consensus 239 ~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 239 KLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHhhChhhhcCCHHHHHhC
Confidence 9999999999999999865
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-35 Score=311.70 Aligned_cols=242 Identities=17% Similarity=0.216 Sum_probs=191.8
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.+|+|+||.||+|...++..||||.++......+.+.+|++.+++++||||++++++|.+.+..++||||+++|+|.
T Consensus 8 ~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 87 (256)
T cd05113 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLL 87 (256)
T ss_pred EeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHH
Confidence 66789999999999998877778999998765555667889999999999999999999999888999999999999999
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---cccc
Q 002186 775 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAKI 848 (955)
Q Consensus 775 ~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~~~~ 848 (955)
+++.. ..++.++..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||.++......... ....
T Consensus 88 ~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~ 164 (256)
T cd05113 88 NYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFP 164 (256)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccC
Confidence 99964 468889999999999999999998 99999999999999999999999999986543221111 1122
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
..|.+||...+..++.++|||||||++|||+| |+.|+....... ............... .....+.+++.
T Consensus 165 ~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~li~ 235 (256)
T cd05113 165 VRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE------TVEKVSQGLRLYRPH---LASEKVYAIMY 235 (256)
T ss_pred hhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH------HHHHHhcCCCCCCCC---CCCHHHHHHHH
Confidence 34678888887788999999999999999999 888875322110 000111110000011 12356788999
Q ss_pred HccCCCCCCCCCHHHHHHHhh
Q 002186 928 LCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
+||+.||++||++.++++.++
T Consensus 236 ~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 236 SCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHcCCCcccCCCHHHHHHhhC
Confidence 999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=304.35 Aligned_cols=242 Identities=15% Similarity=0.202 Sum_probs=190.6
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.+|+ ..+.+|+|.||+|-+|.- ..|+.||||.+++..- ..-.+++||++|+.++||||+.++.+|+..+.+.|
T Consensus 53 HRyE--~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 53 HRYE--ITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hHHH--HHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 3455 788999999999999985 6899999999976432 23457899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||..+|.|+|++.+ .++..+..++++||..|+.|+|.+ +++|||+|.+|||+|.+.++||+|||++.++....
T Consensus 131 vMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k 207 (668)
T KOG0611|consen 131 VMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK 207 (668)
T ss_pred EEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcccc
Confidence 9999999999999986 455666678999999999999999 99999999999999999999999999987665432
Q ss_pred C-CCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 G-SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~-~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
- .+-++.+-|+.||+..+.+| .+.+|.||+||+||.++.|..||++.+.. ....+.-...+.+. +.+
T Consensus 208 fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk--~lvrQIs~GaYrEP-----~~P---- 276 (668)
T KOG0611|consen 208 FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK--RLVRQISRGAYREP-----ETP---- 276 (668)
T ss_pred HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH--HHHHHhhcccccCC-----CCC----
Confidence 1 11125566889999988766 46799999999999999999999865421 11111111222211 111
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....-++.+++..+|++|.|+.+|..+
T Consensus 277 SdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 277 SDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred chHHHHHHHHHhcCcccchhHHHHhhh
Confidence 112345556777899999999999754
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=293.15 Aligned_cols=195 Identities=17% Similarity=0.192 Sum_probs=173.5
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|+ ....+|.|+||.|..++. .+|..+|+|++++.. .+.+...+|..+|+.+.||.+|++.+-|.+.+..|||
T Consensus 45 dfe--~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 45 DFE--RLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhh--heeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 366 778899999999999884 579999999998643 2355667899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||++||.|..++++ +.+......+|.||+.|++|||+. .|++||+||+|||+|.+|.+||.|||+|+..... .
T Consensus 123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r-T 198 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR-T 198 (355)
T ss_pred EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCc-E
Confidence 999999999999998 556667778999999999999999 9999999999999999999999999999876544 3
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCC
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSS 890 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~ 890 (955)
.+-++++.|.+||+..+..++..+|.|||||++|||+.|.+||.+...
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 344578889999999999999999999999999999999999986554
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=319.69 Aligned_cols=245 Identities=23% Similarity=0.329 Sum_probs=195.4
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
...++|-|.||.||.|+++ -.-+||||.++.+....++|..|..+|+.++|||+|+|+|+|..+..+|||+|||.+|+|
T Consensus 271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNL 350 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNL 350 (1157)
T ss_pred eeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccH
Confidence 5678999999999999975 467899999998888899999999999999999999999999999999999999999999
Q ss_pred hHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-C---c
Q 002186 774 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-F---P 845 (955)
Q Consensus 774 ~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-~---~ 845 (955)
.|+|++ ..+----+.++.||+.||+||... .+||||+-++|+|+.++..+||+|||++++...+.-. . .
T Consensus 351 LdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAK 427 (1157)
T KOG4278|consen 351 LDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAK 427 (1157)
T ss_pred HHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCcc
Confidence 999986 223333467899999999999998 9999999999999999999999999999976543211 1 1
Q ss_pred ccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 846 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
..+.| ++||-..+..++.|+|||+|||+|||+.|-+..++.+.+..+ ..+.++.-+. .+.++.+...+.++
T Consensus 428 FPIKW-TAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq--VY~LLEkgyR------M~~PeGCPpkVYeL 498 (1157)
T KOG4278|consen 428 FPIKW-TAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYGLLEKGYR------MDGPEGCPPKVYEL 498 (1157)
T ss_pred Ccccc-cCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH--HHHHHhcccc------ccCCCCCCHHHHHH
Confidence 14554 456777777889999999999999999985443333332211 1122222221 11223455678899
Q ss_pred HHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 926 ALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
|..||+.+|.+||++.|+-+.++.|-
T Consensus 499 MraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 499 MRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred HHHHhcCCcccCccHHHHHHHHHHHh
Confidence 99999999999999999998887664
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=322.27 Aligned_cols=238 Identities=15% Similarity=0.124 Sum_probs=189.9
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|... +|+.||||+++... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 84 (291)
T cd05612 5 RIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVP 84 (291)
T ss_pred eeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCC
Confidence 6788999999999999964 79999999997532 234567889999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccc
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 847 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~ 847 (955)
+|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ...+
T Consensus 85 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~-~~~g 160 (291)
T cd05612 85 GGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTW-TLCG 160 (291)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCCcc-cccC
Confidence 9999999875 457778889999999999999998 999999999999999999999999999876543221 1224
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
...|.+||+..+..++.++||||+||++|||+||+.||....... ....+.... ...+. .....+.+++.
T Consensus 161 t~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~-~~~~~---~~~~~~~~li~ 230 (291)
T cd05612 161 TPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG------IYEKILAGK-LEFPR---HLDLYAKDLIK 230 (291)
T ss_pred ChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-cCCCc---cCCHHHHHHHH
Confidence 556788999888888999999999999999999999987432110 111111111 10011 11345678999
Q ss_pred HccCCCCCCCCC-----HHHHHHH
Q 002186 928 LCTRSTPSDRPS-----MEEALKL 946 (955)
Q Consensus 928 ~Cl~~dp~~RPt-----~~ev~~~ 946 (955)
+|++.||.+||+ ++|++++
T Consensus 231 ~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 231 KLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HHcCCCHHHccCCccCCHHHHhcC
Confidence 999999999995 8888754
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=329.70 Aligned_cols=247 Identities=18% Similarity=0.214 Sum_probs=189.9
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeecccc--hHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||.||+|+. .++..||||+++.... ..+.+.+|++++++++ |||||+++|+|.+.+..|+||
T Consensus 41 ~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 120 (400)
T cd05105 41 LGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIIT 120 (400)
T ss_pred hhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEE
Confidence 778999999999999974 2345799999975332 3456889999999996 999999999999999999999
Q ss_pred eecCCCChhHHhhc------------------------------------------------------------------
Q 002186 766 DYLPNGNLSEKIRT------------------------------------------------------------------ 779 (955)
Q Consensus 766 ey~~~gsL~~~l~~------------------------------------------------------------------ 779 (955)
|||++|+|.++++.
T Consensus 121 Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (400)
T cd05105 121 EYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKY 200 (400)
T ss_pred EecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhh
Confidence 99999999998853
Q ss_pred --------------------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCce
Q 002186 780 --------------------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827 (955)
Q Consensus 780 --------------------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~k 827 (955)
.+++.+...++.|+++|++|||+. +|+||||||+||+++.++.+|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~~~~~k 277 (400)
T cd05105 201 SDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQGKIVK 277 (400)
T ss_pred hhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeCCCEEE
Confidence 135666788999999999999998 999999999999999999999
Q ss_pred ECcccccccccccCCCC----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccc
Q 002186 828 LAEFGFKYLTQLADGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGE 902 (955)
Q Consensus 828 i~DfGl~~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~ 902 (955)
++|||+++......... ......|.+||......++.++|||||||++|||++ |+.|+....... .... .
T Consensus 278 L~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~--~~~~---~ 352 (400)
T cd05105 278 ICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS--TFYN---K 352 (400)
T ss_pred EEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH--HHHH---H
Confidence 99999987543221111 112233678888887888999999999999999997 888876321110 0000 0
Q ss_pred cccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 903 MYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
....... +........+.+++.+||+.||++|||+.+|.++|+.+-+
T Consensus 353 ~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 353 IKSGYRM---AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HhcCCCC---CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 0000000 1111234567899999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=321.20 Aligned_cols=239 Identities=19% Similarity=0.223 Sum_probs=190.7
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.+|.|+-|.|-.|+ ..||+.+|||++.+.. .....+++||.+|+-+.||||+++++++++..++|+|.||++
T Consensus 16 LgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~ 95 (786)
T KOG0588|consen 16 LGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVP 95 (786)
T ss_pred ccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecC
Confidence 45678999999999998 4699999999996542 224567899999999999999999999999999999999999
Q ss_pred CCChhHHhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC-CCCcc
Q 002186 770 NGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-GSFPA 846 (955)
Q Consensus 770 ~gsL~~~l~~~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~-~~~~~ 846 (955)
+|.|++++.++ +...+..+++.||..|+.|+|+. +|+|||+||+|+|||.+.++||+|||+|.+..... -.+.+
T Consensus 96 gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSC 172 (786)
T KOG0588|consen 96 GGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSC 172 (786)
T ss_pred CchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccCCccccccC
Confidence 99999999764 45566678999999999999999 99999999999999999999999999997654322 12345
Q ss_pred cccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
+-+.|++||+..+.+| +.++||||.|||+|.|+||+-||+++. +... ........++. + .....++.++
T Consensus 173 GSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN-ir~L-LlKV~~G~f~M-----P---s~Is~eaQdL 242 (786)
T KOG0588|consen 173 GSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN-IRVL-LLKVQRGVFEM-----P---SNISSEAQDL 242 (786)
T ss_pred CCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc-HHHH-HHHHHcCcccC-----C---CcCCHHHHHH
Confidence 6777999999998876 588999999999999999999998432 2111 11111111111 1 1222345577
Q ss_pred HHHccCCCCCCCCCHHHHHHH
Q 002186 926 ALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.+++..||++|-|++||.++
T Consensus 243 Lr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 243 LRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred HHHHhccCccccccHHHHhhC
Confidence 777888899999999999985
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=313.06 Aligned_cols=246 Identities=20% Similarity=0.266 Sum_probs=192.7
Q ss_pred cccchhhhccCCCCCceEEEeCC------CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeE
Q 002186 691 FNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 762 (955)
|. ..+.||+|+||.||+|... ++..||+|.++.... ....+.+|++.+++++||||+++++++...+..+
T Consensus 7 ~~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 7 VR--FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred cc--hhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 55 7788999999999999853 236899999875332 3456889999999999999999999999989999
Q ss_pred EEEeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC
Q 002186 763 LLYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM 824 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~ 824 (955)
++|||+++|+|.+++.. ..++.+...++.|+++|++|||+. +|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 99999999999999864 246777889999999999999998 999999999999999999
Q ss_pred CceECcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccc
Q 002186 825 EPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGL 899 (955)
Q Consensus 825 ~~ki~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~ 899 (955)
.+||+|||+++....... ........|.+||+.....++.++|||||||++|||+| |..||...... +.
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~------~~ 235 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ------EV 235 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH------HH
Confidence 999999999875432211 11112344778898877788999999999999999998 88888643211 11
Q ss_pred ccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 900 LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
...+.... . .+.......++.+++.+||+.||++||+++||+++|+++
T Consensus 236 ~~~i~~~~-~--~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 236 IEMIRSRQ-L--LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHHHcCC-c--CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11111111 1 111123446688999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-35 Score=324.97 Aligned_cols=238 Identities=12% Similarity=0.108 Sum_probs=189.8
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++++++|||||++++++.+++..|+||||++
T Consensus 22 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 101 (329)
T PTZ00263 22 MGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVV 101 (329)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCC
Confidence 778899999999999995 478999999997532 234567889999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccc
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 847 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~ 847 (955)
+|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ...+
T Consensus 102 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~g 177 (329)
T PTZ00263 102 GGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF-TLCG 177 (329)
T ss_pred CChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc-eecC
Confidence 9999999976 346777788999999999999998 999999999999999999999999999876533221 2234
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
+..|.+||+..+..++.++|||||||++|||+||+.||....... ....+.... ...+.. ...++.+++.
T Consensus 178 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------~~~~i~~~~-~~~p~~---~~~~~~~li~ 247 (329)
T PTZ00263 178 TPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR------IYEKILAGR-LKFPNW---FDGRARDLVK 247 (329)
T ss_pred ChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH------HHHHHhcCC-cCCCCC---CCHHHHHHHH
Confidence 556888999988888999999999999999999999987433211 011111111 111111 1235678899
Q ss_pred HccCCCCCCCCC-----HHHHHHH
Q 002186 928 LCTRSTPSDRPS-----MEEALKL 946 (955)
Q Consensus 928 ~Cl~~dp~~RPt-----~~ev~~~ 946 (955)
+||+.||++||+ ++|++++
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcC
Confidence 999999999997 6777643
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=320.71 Aligned_cols=244 Identities=17% Similarity=0.237 Sum_probs=188.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCc----EEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGI----TVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~----~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||.||+|+. .+|. .||||.++... ...+.+.+|+.+++.++||||++++|+|... ..++|+||
T Consensus 11 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~ 89 (316)
T cd05108 11 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 89 (316)
T ss_pred eeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceeeeec
Confidence 888999999999999984 3444 48999986432 2356788899999999999999999999874 57899999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
+++|+|.++++. ..++....+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 90 ~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 166 (316)
T cd05108 90 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEY 166 (316)
T ss_pred CCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccccCCCcce
Confidence 999999999976 357888899999999999999998 99999999999999999999999999997654322211
Q ss_pred c----ccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 845 P----AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 845 ~----~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. .....|.+||+.....++.++|||||||++|||+| |+.|+.+..... ........ ...+..+ ...
T Consensus 167 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---~~~~~~~~---~~~~~~~---~~~ 237 (316)
T cd05108 167 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG---ERLPQPP---ICT 237 (316)
T ss_pred eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHhCC---CCCCCCC---CCC
Confidence 1 11223677888888888999999999999999998 888775322110 00001000 0011011 123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
..+.+++.+||+.||++||++.|++..+..+.
T Consensus 238 ~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 238 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 45778999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=315.72 Aligned_cols=247 Identities=17% Similarity=0.198 Sum_probs=186.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|.. .+|+.||+|+++... .....+.+|++++++++||||+++++++.+++..++||||++ |
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~ 87 (288)
T cd07871 9 KLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-S 87 (288)
T ss_pred EeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-c
Confidence 678899999999999985 478999999986532 224466789999999999999999999999999999999997 5
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Ccc
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 846 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~ 846 (955)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 88 ~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~ 164 (288)
T cd07871 88 DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEV 164 (288)
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCce
Confidence 99998864 347788889999999999999998 9999999999999999999999999998754322211 122
Q ss_pred cccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------ccccc---ccccccccc
Q 002186 847 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDG---LLGEMYNEN 907 (955)
Q Consensus 847 ~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~~~~~---~~~~~~~~~ 907 (955)
+...|.+||...+ ..++.++||||+||++|||+||+.||........ |.... .......+.
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (288)
T cd07871 165 VTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQ 244 (288)
T ss_pred ecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCc
Confidence 4556788887654 5678899999999999999999999864321100 00000 000000000
Q ss_pred ccCCC--CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 908 EVGSS--SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 908 ~~~~~--~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..... ........+..+++.+|++.||++|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 245 YRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred cCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000 000112345779999999999999999999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-35 Score=322.34 Aligned_cols=236 Identities=13% Similarity=0.076 Sum_probs=187.0
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
.||+|+||.||++.. .+|+.||||+++... .....+.+|++++++++||||+++++++..++..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 589999999999984 579999999997532 234567789999999999999999999999999999999999999
Q ss_pred hhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcccc
Q 002186 773 LSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 848 (955)
Q Consensus 773 L~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~ 848 (955)
|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....++
T Consensus 82 L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 158 (328)
T cd05593 82 LFFHLSRERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158 (328)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence 9998865 467888899999999999999998 999999999999999999999999999864322111 112245
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..|.+||+.....++.++||||+||++|||+||+.||....... ....+.... ...+. ....++.+++.+
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~------~~~~~~~~~-~~~p~---~~~~~~~~li~~ 228 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK------LFELILMED-IKFPR---TLSADAKSLLSG 228 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH------HHHHhccCC-ccCCC---CCCHHHHHHHHH
Confidence 56888999888888999999999999999999999986432110 001111111 11111 123456788889
Q ss_pred ccCCCCCCCC-----CHHHHHHH
Q 002186 929 CTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 929 Cl~~dp~~RP-----t~~ev~~~ 946 (955)
|++.||++|| +++|++++
T Consensus 229 ~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 229 LLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HcCCCHHHcCCCCCCCHHHHhcC
Confidence 9999999997 89998764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=320.23 Aligned_cols=194 Identities=16% Similarity=0.193 Sum_probs=164.6
Q ss_pred hcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
.|. ..+.||+|+||.||+|... +|..||+|.++... ...+.+.+|++++++++|||||+++++|.+++..++|||
T Consensus 6 ~y~--~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 6 DFE--KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhh--eeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 355 7788999999999999964 78899999987542 234568899999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 767 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 767 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
|+++|+|.+++.. ..++.....++.|+++|++|||+.+ +|+||||||+||+++.++.+||+|||++..........
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~ 161 (333)
T cd06650 84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 161 (333)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcccc
Confidence 9999999999975 4567777899999999999999742 69999999999999999999999999986543222222
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCC
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 887 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~ 887 (955)
..+...|.+||...+..++.++|||||||++|||++|+.||..
T Consensus 162 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 162 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred CCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 2244557889998888889999999999999999999999863
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=310.06 Aligned_cols=248 Identities=13% Similarity=0.153 Sum_probs=193.9
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecc----cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.+|+|+||.||+|+. .+|+.||||+++.. ......+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 6 i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 85 (267)
T cd08228 6 IEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELAD 85 (267)
T ss_pred eeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecC
Confidence 678899999999999995 48899999987642 2224567889999999999999999999999999999999999
Q ss_pred CCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 770 NGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 770 ~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
+|+|.+++.. ..+......++.|+++|++|||+. +|+||||||+||+++.++.++++|||++.........
T Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~ 162 (267)
T cd08228 86 AGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred CCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccchhHH
Confidence 9999988852 256777889999999999999998 9999999999999999999999999998754322211
Q ss_pred --CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 844 --FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 844 --~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
...+...+.+||...+...+.++|||||||++|||+||+.|+........ .....+.....+ +.........
T Consensus 163 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~ 236 (267)
T cd08228 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF-SLCQKIEQCDYP-----PLPTEHYSEK 236 (267)
T ss_pred HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH-HHHHHHhcCCCC-----CCChhhcCHH
Confidence 11233446788988777888999999999999999999999864321110 000111111000 0111233456
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
+.+++.+||+.+|++||+++||++.|+.++
T Consensus 237 ~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 237 LRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 788999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=322.43 Aligned_cols=235 Identities=12% Similarity=0.076 Sum_probs=185.8
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
.||+|+||.||++.. .+|+.||+|+++... .....+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 589999999999985 579999999997532 223456789999999999999999999999999999999999999
Q ss_pred hhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcccc
Q 002186 773 LSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 848 (955)
Q Consensus 773 L~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~ 848 (955)
|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....++
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 158 (323)
T cd05595 82 LFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence 9998865 457888899999999999999998 999999999999999999999999999864322111 112245
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..|.+||+.....++.++|||||||++|||+||+.||....... ....+.... ...+. .....+.+++.+
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~------~~~~~~~~~-~~~p~---~~~~~~~~li~~ 228 (323)
T cd05595 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER------LFELILMEE-IRFPR---TLSPEAKSLLAG 228 (323)
T ss_pred cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHhcCC-CCCCC---CCCHHHHHHHHH
Confidence 56788999888888999999999999999999999986432111 111111111 11111 123456788889
Q ss_pred ccCCCCCCCC-----CHHHHHH
Q 002186 929 CTRSTPSDRP-----SMEEALK 945 (955)
Q Consensus 929 Cl~~dp~~RP-----t~~ev~~ 945 (955)
|++.||++|| ++.|+++
T Consensus 229 ~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 229 LLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HccCCHHHhCCCCCCCHHHHHc
Confidence 9999999998 8888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=324.67 Aligned_cols=241 Identities=17% Similarity=0.197 Sum_probs=184.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++|+|||++++++.+.+..++||||+++|
T Consensus 78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 157 (353)
T PLN00034 78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGG 157 (353)
T ss_pred hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCC
Confidence 678899999999999985 579999999986532 23456889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccccc
Q 002186 772 NLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIA 849 (955)
Q Consensus 772 sL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~~ 849 (955)
+|.+.. .........++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....+..
T Consensus 158 ~L~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 232 (353)
T PLN00034 158 SLEGTH--IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTI 232 (353)
T ss_pred cccccc--cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCc
Confidence 997643 235566778999999999999998 999999999999999999999999999876533211 1123455
Q ss_pred ccCchhhhhc-----cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 850 WTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 850 ~~~~~e~~~~-----~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
+|.+||++.. ...+.++|||||||++|||++|+.||..... ..+... .......... ........++.+
T Consensus 233 ~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~-~~~~~~--~~~~~~~~~~---~~~~~~~~~l~~ 306 (353)
T PLN00034 233 AYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ-GDWASL--MCAICMSQPP---EAPATASREFRH 306 (353)
T ss_pred cccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-ccHHHH--HHHHhccCCC---CCCCccCHHHHH
Confidence 6778887632 2345689999999999999999999873221 111100 0000000000 111123356788
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 002186 925 VALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
++.+||+.||++|||++|++++
T Consensus 307 li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 307 FISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999999875
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=312.00 Aligned_cols=252 Identities=18% Similarity=0.229 Sum_probs=192.0
Q ss_pred hhhhccCCCCCceEEEe-----CCCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-----~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 765 (955)
..+.||+|+||+||.+. ..+|..||+|.++.... ..+.+.+|++.+++++||||++++++|... ...++||
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (283)
T cd05080 8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIM 87 (283)
T ss_pred eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEe
Confidence 66889999999997754 34788999999875432 356678899999999999999999998753 4689999
Q ss_pred eecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 766 DYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 766 ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
||+++|+|.+++.. ..++.++..++.|+++|++|||+. +|+||||||+||+++.++.+|++|||+++........
T Consensus 88 e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 164 (283)
T cd05080 88 EYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 164 (283)
T ss_pred cCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccCCcchhh
Confidence 99999999999875 678999999999999999999998 9999999999999999999999999998754332111
Q ss_pred ----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccc--------cccccccccccCC
Q 002186 844 ----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG--------LLGEMYNENEVGS 911 (955)
Q Consensus 844 ----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 911 (955)
...+...+.+||.......+.++|||||||++|||+||+.|+............. ...+..+....
T Consensus 165 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 242 (283)
T cd05080 165 RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR-- 242 (283)
T ss_pred ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC--
Confidence 1112334567888877788999999999999999999999875322110000000 00001111100
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+........+.+++.+||+.||++|||++++++.|+.+.
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 0111123356888999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=307.05 Aligned_cols=241 Identities=18% Similarity=0.200 Sum_probs=187.2
Q ss_pred hhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 697 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
+.||+|+||.||+|+. .+|+.||+|.+.... .....+.+|++++++++||||++++++|...+..++||||+++|+|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 3689999999999996 479999999886432 2345688999999999999999999999999999999999999999
Q ss_pred hHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC----cc
Q 002186 774 SEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF----PA 846 (955)
Q Consensus 774 ~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~----~~ 846 (955)
.++++. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+|++|||++.......... ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 999965 357888999999999999999998 99999999999999999999999999986533211110 01
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
....|.+||......++.++|||||||++|||++ |..|+....... ....... .... +........+.++
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~---~~~~~~~---~~~~---~~~~~~~~~~~~l 228 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ---TREAIEQ---GVRL---PCPELCPDAVYRL 228 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH---HHHHHHc---CCCC---CCcccCCHHHHHH
Confidence 1123678888877788999999999999999998 666664221100 0000000 0000 1111223567789
Q ss_pred HHHccCCCCCCCCCHHHHHHHhhc
Q 002186 926 ALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
+.+|++.||++|||++|+.++|+.
T Consensus 229 i~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 229 MERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred HHHHcCCChhhCcCHHHHHHHHhC
Confidence 999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=303.65 Aligned_cols=253 Identities=18% Similarity=0.273 Sum_probs=186.8
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHH--hccCCCCceeEeEEEEcCC----eeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRI--GTVRHKNLIRLLGFCYNRH----QAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l--~~l~H~niv~l~g~~~~~~----~~~lv~ey~ 768 (955)
..+++|+|+||.||||.+. ++.||||++... ..+.|..|-++. -.++|+||++++++-.... +++||+||.
T Consensus 214 l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~--~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh 290 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ--EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFH 290 (534)
T ss_pred hHHHhhcCccceeehhhcc-CceeEEEecCHH--HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeec
Confidence 6788999999999999994 589999999743 345565555554 4678999999999987655 899999999
Q ss_pred CCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcC------CCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 769 PNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHD------CYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 769 ~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~------~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
++|||.++|.. ..+|..-.+|+..+++||+|||.. +.|+|+|||||++|||+..|+++.|+|||+|..+....
T Consensus 291 ~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~ 370 (534)
T KOG3653|consen 291 PKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGK 370 (534)
T ss_pred cCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCC
Confidence 99999999987 569999999999999999999974 45799999999999999999999999999997765432
Q ss_pred C----CCcccccccCchhhhhccC-Cc-----ccccchhHHHHHHHHHhCCCCCCCCC-CCCCcccc---------cccc
Q 002186 842 G----SFPAKIAWTESGEFYNAMK-EE-----MYMDVYGFGEIILEILTNGRLTNAGS-SLQNKPID---------GLLG 901 (955)
Q Consensus 842 ~----~~~~~~~~~~~~e~~~~~~-~~-----~~~DV~S~Gvvl~Elltg~~p~~~~~-~~~~~~~~---------~~~~ 901 (955)
. ....++..|++||+.++.- .. .+.||||+|.|+|||+++..-++.+. +..+-+.. +.+.
T Consensus 371 ~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq 450 (534)
T KOG3653|consen 371 PQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQ 450 (534)
T ss_pred CCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHH
Confidence 2 1234677789999887632 11 23799999999999999876554211 11111111 0111
Q ss_pred cc-ccccccC-CCCch--HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 902 EM-YNENEVG-SSSSL--QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 902 ~~-~~~~~~~-~~~~~--~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+. +..+..+ .+..+ ...+.-+.+.+..||+.||+.|-|+.=|.+++..+
T Consensus 451 ~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l 503 (534)
T KOG3653|consen 451 ELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAEL 503 (534)
T ss_pred HHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHH
Confidence 11 1111111 11111 12345567888899999999999998887776544
|
|
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=320.92 Aligned_cols=250 Identities=22% Similarity=0.247 Sum_probs=191.3
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcC-C
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR-H 759 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~-~ 759 (955)
+|. ..+.||+|+||.||+|.. .+++.||+|+++... ...+.+.+|++++.++ +||||++++++|... .
T Consensus 8 ~~~--i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 8 RLK--LGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred Hhh--hhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 355 778999999999999963 346789999987532 2345577899999999 899999999988754 5
Q ss_pred eeEEEEeecCCCChhHHhhc------------------------------------------------------------
Q 002186 760 QAYLLYDYLPNGNLSEKIRT------------------------------------------------------------ 779 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~------------------------------------------------------------ 779 (955)
..++||||+++|+|.+++..
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 78899999999999998853
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC----cccccccC
Q 002186 780 ---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF----PAKIAWTE 852 (955)
Q Consensus 780 ---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~----~~~~~~~~ 852 (955)
.++|..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......... ..+...|.
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 357888899999999999999998 99999999999999999999999999987643222111 11223477
Q ss_pred chhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccC
Q 002186 853 SGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTR 931 (955)
Q Consensus 853 ~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~ 931 (955)
+||+.....++.++|||||||++|||+| |..||....... . ........... ........++.+++.+||+
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~--~----~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~ 314 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE--E----FCRRLKEGTRM--RAPEYATPEIYSIMLDCWH 314 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH--H----HHHHHhccCCC--CCCccCCHHHHHHHHHHcc
Confidence 8898888889999999999999999998 888875322110 0 00010110000 0011223567899999999
Q ss_pred CCCCCCCCHHHHHHHhhccCC
Q 002186 932 STPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 932 ~dp~~RPt~~ev~~~L~~~~~ 952 (955)
.+|++||+++|++++|+.+-+
T Consensus 315 ~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 315 NNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred CChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=283.57 Aligned_cols=247 Identities=22% Similarity=0.242 Sum_probs=192.2
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcC-----CeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~~~lv~ey 767 (955)
..+.+|+|||+.||.++ +.++..+|+|++.... .+.+...+|++..++++||||+++++++..+ .+.||+++|
T Consensus 25 i~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Py 104 (302)
T KOG2345|consen 25 IQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPY 104 (302)
T ss_pred EeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeeh
Confidence 77889999999999998 7799999999998655 4577789999999999999999999987643 368999999
Q ss_pred cCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 768 LPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 768 ~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
...|+|.+.+.. ..+..+.+.|+.|+++||.+||.. .|+.+||||||.|||+.+++.+++.|||-+......-
T Consensus 105 y~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i 183 (302)
T KOG2345|consen 105 YKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQI 183 (302)
T ss_pred hccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccccceEe
Confidence 999999999865 347788899999999999999987 5589999999999999999999999999865322110
Q ss_pred --C----------CCcccccccCchhhhhc---cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc--ccccccc
Q 002186 842 --G----------SFPAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID--GLLGEMY 904 (955)
Q Consensus 842 --~----------~~~~~~~~~~~~e~~~~---~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~--~~~~~~~ 904 (955)
. ....+++ |.+||.+.- ...++++||||+||++|+|+.|..||+.... +..... ..-.++.
T Consensus 184 ~~~~~a~~lQe~a~e~Ct~p-yRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~-~GgSlaLAv~n~q~s 261 (302)
T KOG2345|consen 184 EGSRQALRLQEWAEERCTIP-YRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ-QGGSLALAVQNAQIS 261 (302)
T ss_pred echHHHHHHHHHHHHhCCCc-ccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-cCCeEEEeeeccccc
Confidence 0 1122445 667787653 4578999999999999999999999983211 111110 0011111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
-+. .. ...+.+.+++..|++.||.+||++.|++..++.+.
T Consensus 262 ~P~----~~---~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 262 IPN----SS---RYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred cCC----CC---CccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 111 11 14466788999999999999999999999887653
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=328.99 Aligned_cols=245 Identities=19% Similarity=0.213 Sum_probs=194.0
Q ss_pred chhhhccCCCCCceEEEeCCCC-cEEEEEEeec-ccchHHHHHHHHHHHhccC-CCCceeEeEE-EEc---C---CeeEE
Q 002186 694 TECEEAARPQSAAGCKAVLPTG-ITVSVKKIEW-GATRIKIVSEFITRIGTVR-HKNLIRLLGF-CYN---R---HQAYL 763 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~~~~g-~~vAvK~~~~-~~~~~~~~~~e~~~l~~l~-H~niv~l~g~-~~~---~---~~~~l 763 (955)
...+.|.+|||+.||.|....+ ..||+|++-. +....+...+||++|++++ |||||.+++. ... . -+++|
T Consensus 40 ~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evll 119 (738)
T KOG1989|consen 40 TVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLL 119 (738)
T ss_pred EEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEe
Confidence 3677899999999999996554 9999999854 4445778899999999998 9999999993 322 1 37899
Q ss_pred EEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
.||||++|+|-|++.. .+...+.++|+.|+++|+++||.. .|+|||||||.+||||+.++..|+||||-+.-.-.
T Consensus 120 LmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~ 198 (738)
T KOG1989|consen 120 LMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTKIL 198 (738)
T ss_pred ehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccccC
Confidence 9999999999999874 567889999999999999999975 78999999999999999999999999998643211
Q ss_pred cC-C----------CCcccccccCchhhh---hccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccc
Q 002186 840 AD-G----------SFPAKIAWTESGEFY---NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 840 ~~-~----------~~~~~~~~~~~~e~~---~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
.. . -...+++-|.+||.. .+...++|+|||++||+||-|+....||+++.... +.+
T Consensus 199 ~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la----------Iln 268 (738)
T KOG1989|consen 199 SPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA----------ILN 268 (738)
T ss_pred CCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee----------EEe
Confidence 11 0 012245557788754 56789999999999999999999999998653221 111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.... .+..+.....+.+++..||++||.+||++-||++.+..+.
T Consensus 269 g~Y~--~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~ 312 (738)
T KOG1989|consen 269 GNYS--FPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA 312 (738)
T ss_pred cccc--CCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence 1100 1122455677889999999999999999999999887664
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=308.61 Aligned_cols=247 Identities=19% Similarity=0.279 Sum_probs=193.8
Q ss_pred hcccchhhhccCCCCCceEEEeCC----CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||+||+|... +...||||.++.... ....+.+|+..+++++||||+++++++.+.+..++
T Consensus 5 ~~~--~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 5 YVT--IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred Hce--eeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 355 7788999999999999864 345799999875432 34568889999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||+++|+|.+++.. ..++.+..+++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++.....
T Consensus 83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 9999999999999865 468899999999999999999998 9999999999999999999999999998765421
Q ss_pred CCCC----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 841 DGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 841 ~~~~----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
.... ......|.+||...+..++.++|||||||++|||+| |..|+...... .....+....... ..
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~~---~~ 230 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ------DVIKAVEDGYRLP---PP 230 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH------HHHHHHHcCCCCC---CC
Confidence 1111 111234678888887888999999999999999998 88887532211 0011111110000 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+....+.+++.+||+.+|++||+++||+++|+++
T Consensus 231 ~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 231 MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 12335677999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=324.20 Aligned_cols=248 Identities=20% Similarity=0.275 Sum_probs=185.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcC-----CeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~~~lv~ 765 (955)
..+.||+|+||.||+|+. .+|+.||||+++... .....+.+|++++++++|||||++++++... ...|+||
T Consensus 4 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~ 83 (338)
T cd07859 4 IQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVF 83 (338)
T ss_pred EEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEE
Confidence 667899999999999994 579999999987422 2344678899999999999999999998643 2479999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
|||+ ++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 84 e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 159 (338)
T cd07859 84 ELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 159 (338)
T ss_pred ecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence 9995 699998875 467888899999999999999998 999999999999999999999999999875422211
Q ss_pred ----CCcccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc---------cc--------c-
Q 002186 843 ----SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP---------ID--------G- 898 (955)
Q Consensus 843 ----~~~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~---------~~--------~- 898 (955)
....++.+|.+||+... ..++.++|||||||++|||+||+.||.......... .. .
T Consensus 160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 239 (338)
T cd07859 160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK 239 (338)
T ss_pred cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence 11224566888998765 578889999999999999999999986432110000 00 0
Q ss_pred ---cccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 899 ---LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 899 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+....+.......+.....+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 240 ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000000000000001123456789999999999999999999864
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=311.51 Aligned_cols=239 Identities=13% Similarity=0.103 Sum_probs=185.7
Q ss_pred ccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 699 AARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 699 ~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
||+|+||+||++.. .+|+.||||++..... ..+.+..|++++++++||||+++.+++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 68999999999985 5899999999975322 234567899999999999999999999999999999999999999
Q ss_pred hHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC--c
Q 002186 774 SEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF--P 845 (955)
Q Consensus 774 ~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~--~ 845 (955)
.+.+.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......... .
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 988742 357888899999999999999998 99999999999999999999999999986543322111 1
Q ss_pred ccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 846 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
.++..|.+||+..+..++.++|||||||++|||+||+.||........ ............ . .........+.++
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~-~---~~~~~~~~~~~~l 231 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRILNDS-V---TYPDKFSPASKSF 231 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh--HHHHHHhhcccC-C---CCcccCCHHHHHH
Confidence 234557889999888899999999999999999999999874322110 000111111111 1 1112234567788
Q ss_pred HHHccCCCCCCCC-----CHHHHHHH
Q 002186 926 ALLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 926 ~~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
+.+|++.||++|| +++|++++
T Consensus 232 i~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 232 CEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred HHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 8999999999999 77888753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=311.91 Aligned_cols=243 Identities=20% Similarity=0.226 Sum_probs=188.0
Q ss_pred hhhhccCCCCCceEEEeC-----CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-----~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||+||+|.. .++..||+|.++.... ....+.+|++++++++|||||++++++...+..++||||
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 88 (283)
T cd05090 9 FMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEY 88 (283)
T ss_pred eeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEc
Confidence 567899999999999973 4678999999975322 245688899999999999999999999999999999999
Q ss_pred cCCCChhHHhhc-------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceE
Q 002186 768 LPNGNLSEKIRT-------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828 (955)
Q Consensus 768 ~~~gsL~~~l~~-------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki 828 (955)
+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+|+
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~~~kl 165 (283)
T cd05090 89 LNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQLHVKI 165 (283)
T ss_pred CCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCCcEEe
Confidence 999999999852 246777788999999999999998 9999999999999999999999
Q ss_pred CcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccc
Q 002186 829 AEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 903 (955)
Q Consensus 829 ~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 903 (955)
+|||+++....... ........|.+||+.....++.++|||||||++|||+| |..||...... . +.+.
T Consensus 166 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~--~-----~~~~ 238 (283)
T cd05090 166 SDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ--E-----VIEM 238 (283)
T ss_pred ccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--H-----HHHH
Confidence 99999875432211 11111223678898877788999999999999999999 77777532210 0 0011
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 904 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
....... +.......++.+++.+||+.||++||++.++.++|++
T Consensus 239 ~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 239 VRKRQLL--PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHcCCcC--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111000 0111223457788899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-35 Score=317.00 Aligned_cols=247 Identities=18% Similarity=0.184 Sum_probs=188.2
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|++++++++|||||++++++..++..++||||+++
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (287)
T cd07848 5 VLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEK 84 (287)
T ss_pred EEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCC
Confidence 6788999999999999964 78899999997532 2345677899999999999999999999999999999999998
Q ss_pred CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---CCc
Q 002186 771 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---SFP 845 (955)
Q Consensus 771 gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~---~~~ 845 (955)
+.+..+... ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 85 ~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 161 (287)
T cd07848 85 NMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEY 161 (287)
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccccccccc
Confidence 877655443 467888889999999999999998 999999999999999999999999999876432211 111
Q ss_pred ccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-ccc-----------------ccccccc
Q 002186 846 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLL-----------------GEMYNEN 907 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~-----------------~~~~~~~ 907 (955)
.+...|.+||+..+..++.++||||+||++|||++|+.||............ ... .....+.
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (287)
T cd07848 162 VATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPA 241 (287)
T ss_pred ccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCc
Confidence 2445578899888888899999999999999999999988743211100000 000 0000000
Q ss_pred ccCCCCch-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 908 EVGSSSSL-----QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 908 ~~~~~~~~-----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....... ......+.+++.+|++.||++|||++|+++
T Consensus 242 -~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 242 -VNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred -ccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000 112356889999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-35 Score=305.40 Aligned_cols=248 Identities=17% Similarity=0.177 Sum_probs=190.0
Q ss_pred HhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---------------hHHHHHHHHHHHhccCCCCcee
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------------RIKIVSEFITRIGTVRHKNLIR 750 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---------------~~~~~~~e~~~l~~l~H~niv~ 750 (955)
..+.|. ....||+|.||.|-+|.. .+|+.||||++.+... ..+...+||.+|++++|||||+
T Consensus 95 ~lNqy~--l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 95 QLNQYE--LIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ehhhee--hhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 345576 888999999999999984 5899999999964211 1357889999999999999999
Q ss_pred EeEEEEcC--CeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCc
Q 002186 751 LLGFCYNR--HQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826 (955)
Q Consensus 751 l~g~~~~~--~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ 826 (955)
|+.+--++ +.+|||+|||..|.+...=.. .+...+..+|.+++..||+|||.. +||||||||+|+|+++++++
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~V 249 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGTV 249 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCcE
Confidence 99998764 589999999999987543322 256778889999999999999999 99999999999999999999
Q ss_pred eECcccccccccccC--C-----CCcccccccCchhhhhcc----CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc
Q 002186 827 HLAEFGFKYLTQLAD--G-----SFPAKIAWTESGEFYNAM----KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP 895 (955)
Q Consensus 827 ki~DfGl~~~~~~~~--~-----~~~~~~~~~~~~e~~~~~----~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~ 895 (955)
||+|||.+....... + ....+++...+||..... ..+.+.||||+||.||.|+.|+-||.+....
T Consensus 250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~---- 325 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL---- 325 (576)
T ss_pred EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH----
Confidence 999999876442111 0 113345556677765442 2456689999999999999999999854321
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 947 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L 947 (955)
+....++... +. .+..++..+++.+++.++|.+||.+|.+..+|..+.
T Consensus 326 --~l~~KIvn~p-L~-fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 326 --ELFDKIVNDP-LE-FPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred --HHHHHHhcCc-cc-CCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 2233333332 11 223345567788999999999999999999987654
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=310.85 Aligned_cols=252 Identities=19% Similarity=0.309 Sum_probs=190.2
Q ss_pred hhhhccCCCCCceEEEeC-----CCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-----~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~e 766 (955)
..+.+|+|+||.||+|.. .+|..||||+++.... ..+.+.+|++++++++|||||++++++... ...++|||
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 87 (284)
T cd05081 8 FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVME 87 (284)
T ss_pred eeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEE
Confidence 678899999999999973 3688999999875432 356788999999999999999999988643 46899999
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
|+++|+|.+++.. ..+|..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 88 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 164 (284)
T cd05081 88 YLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEY 164 (284)
T ss_pred ecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccccccCCCcc
Confidence 9999999999964 368999999999999999999998 9999999999999999999999999998765332211
Q ss_pred C----c-ccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-c--------ccccccccccc
Q 002186 844 F----P-AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-G--------LLGEMYNENEV 909 (955)
Q Consensus 844 ~----~-~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~--------~~~~~~~~~~~ 909 (955)
. . .....|.+||+.....++.++|||||||++|||+||..++............ . .+.+.......
T Consensus 165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd05081 165 YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGR 244 (284)
T ss_pred eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCc
Confidence 1 1 1122356788887778899999999999999999987765422110000000 0 00001111100
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+........+.+++.+||+.+|++||||+||++.|+.++
T Consensus 245 --~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 245 --LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 0111122346789999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=321.03 Aligned_cols=241 Identities=15% Similarity=0.100 Sum_probs=190.5
Q ss_pred hcccchhhhccCCCCCceEEEeCC-C-CcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP-T-GITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~-~-g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|... + +..||||++.... ...+.+.+|+++++.++|||||++++++.+++..++
T Consensus 31 ~y~--~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 31 DFN--FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hcE--EEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 355 7788999999999999843 3 4689999986532 234567789999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 109 v~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~ 185 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT 185 (340)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCCCc
Confidence 9999999999999975 457778889999999999999998 99999999999999999999999999987653322
Q ss_pred CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 842 GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
....++..|++||+..+..++.++|||||||++|||+||+.||....... ....+.... ...+... ...
T Consensus 186 -~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~------~~~~i~~~~-~~~p~~~---~~~ 254 (340)
T PTZ00426 186 -YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL------IYQKILEGI-IYFPKFL---DNN 254 (340)
T ss_pred -ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH------HHHHHhcCC-CCCCCCC---CHH
Confidence 12234556889999888888999999999999999999999997433211 011111111 1111111 234
Q ss_pred HHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002186 922 VLDVALLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
+.+++.+|++.||++|+ +++|++++
T Consensus 255 ~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 255 CKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 66888899999999995 89988764
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=306.97 Aligned_cols=244 Identities=18% Similarity=0.236 Sum_probs=194.4
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
..+.||.|+||.||+|...++..||+|.++.... ..+.+.+|++.+++++||||+++++++.+.+..++||||+++|+|
T Consensus 10 ~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (261)
T cd05148 10 LERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSL 89 (261)
T ss_pred HhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCH
Confidence 7789999999999999988899999999976544 456788999999999999999999999999999999999999999
Q ss_pred hHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC--ccc
Q 002186 774 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF--PAK 847 (955)
Q Consensus 774 ~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~--~~~ 847 (955)
.++++. ..++.+...++.|++.|++|||+. +|+||||||+||+++.++.+|++|||++.......... ...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~ 166 (261)
T cd05148 90 LAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKI 166 (261)
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCC
Confidence 999975 357888999999999999999998 99999999999999999999999999986543221111 112
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...+.+||......++.++|||||||++|||++ |+.|+..... . ............ +........+.+++
T Consensus 167 ~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~-~-----~~~~~~~~~~~~---~~~~~~~~~~~~~i 237 (261)
T cd05148 167 PYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN-H-----EVYDQITAGYRM---PCPAKCPQEIYKIM 237 (261)
T ss_pred ceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH-H-----HHHHHHHhCCcC---CCCCCCCHHHHHHH
Confidence 233677888877788899999999999999999 6777753221 0 011111111001 01112235577899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhcc
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+||+.||++|||++|+.+.|+.+
T Consensus 238 ~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 238 LECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHcCCCchhCcCHHHHHHHHhcC
Confidence 999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=313.41 Aligned_cols=240 Identities=17% Similarity=0.194 Sum_probs=196.4
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCe-eEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ-AYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~-~~lv~ey~~ 769 (955)
..+.+|+|+||.++..+. .++..+++|++..... ..+....|+.++++++|||||.+.+.++.++. .+||||||+
T Consensus 8 ~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~e 87 (426)
T KOG0589|consen 8 VLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCE 87 (426)
T ss_pred hhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecC
Confidence 788999999999987764 4677999999976433 24467889999999999999999999998888 999999999
Q ss_pred CCChhHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC--CC
Q 002186 770 NGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GS 843 (955)
Q Consensus 770 ~gsL~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~--~~ 843 (955)
||++.+.|.+. .+..+...++.|+..|+.|||+. .|+|||||++||++..+..+|++|||+|+...... .+
T Consensus 88 Gg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~ 164 (426)
T KOG0589|consen 88 GGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLAS 164 (426)
T ss_pred CCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCchhhhh
Confidence 99999999762 35556679999999999999988 99999999999999999999999999999876654 23
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...++++|+.||...+.+|+.|+||||+||++|||++-+++|.+.... ..........+++. ......++.
T Consensus 165 tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~--~Li~ki~~~~~~Pl-------p~~ys~el~ 235 (426)
T KOG0589|consen 165 TVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS--ELILKINRGLYSPL-------PSMYSSELR 235 (426)
T ss_pred eecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH--HHHHHHhhccCCCC-------CccccHHHH
Confidence 345889999999999999999999999999999999998888743311 11111222222222 223345667
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.++..|++.+|..||++.|++.+
T Consensus 236 ~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 236 SLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHHHhhcCCccCCCHHHHhhC
Confidence 78888999999999999999875
|
|
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=306.70 Aligned_cols=248 Identities=13% Similarity=0.163 Sum_probs=195.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|++|.||+|.. .+|+.||||.+.... .....+.+|++++++++||||+++++++.+++..++||||++
T Consensus 6 ~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~ 85 (267)
T cd08229 6 IEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELAD 85 (267)
T ss_pred hhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecC
Confidence 678899999999999994 689999999886422 234567889999999999999999999999999999999999
Q ss_pred CCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 770 NGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 770 ~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
+++|.+++.. ..++.+...++.|+++|++|||+. +|+|+||||+||+++.++.+|++|||++.........
T Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd08229 86 AGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred CCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcc
Confidence 9999998863 357888899999999999999998 9999999999999999999999999998654332211
Q ss_pred --CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 844 --FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 844 --~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
...+...+.+||+......+.++|||||||++|||++|..|+....... ............+. . ........
T Consensus 163 ~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~-~----~~~~~~~~ 236 (267)
T cd08229 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCKKIEQCDYPP-L----PSDHYSEE 236 (267)
T ss_pred cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH-HHHhhhhhcCCCCC-C----CcccccHH
Confidence 1123445778898888888899999999999999999999986432110 00001111110000 0 11223456
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
+.+++.+||+.||.+||||++|++.++++.
T Consensus 237 ~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 237 LRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 778899999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-34 Score=306.04 Aligned_cols=249 Identities=16% Similarity=0.174 Sum_probs=195.6
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecc----cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.+|+|++|.||+|... +|+.||+|.++.. ....+.+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus 6 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (267)
T cd08224 6 IEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELAD 85 (267)
T ss_pred eeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCC
Confidence 6788999999999999965 8999999988642 1225578899999999999999999999999999999999999
Q ss_pred CCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 770 NGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 770 ~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
+|+|.+++.. ..++.+...++.++++|++|||+. +|+||||||+||+++.++.+|++|||++.........
T Consensus 86 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~ 162 (267)
T cd08224 86 AGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred CCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccCCCcc
Confidence 9999998853 357888899999999999999998 9999999999999999999999999998654332211
Q ss_pred --CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 844 --FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 844 --~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
...+...+.+||+..+..++.++|||||||++|||+||+.|+....................+. + .......
T Consensus 163 ~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~ 236 (267)
T cd08224 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPL----P--ADHYSEE 236 (267)
T ss_pred cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCC----C--hhhcCHH
Confidence 1123344678898888788999999999999999999999986432110000000000011010 0 1123346
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
+.+++.+||..+|++|||+.+|+++|+++++
T Consensus 237 ~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~~ 267 (267)
T cd08224 237 LRDLVSRCINPDPEKRPDISYVLQVAKEMHA 267 (267)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHHHHHHhcC
Confidence 7789999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=312.05 Aligned_cols=245 Identities=19% Similarity=0.234 Sum_probs=193.0
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.+|+|+||.||+|+. .++..||+|.++.... ..+.+.+|++.+++++||||+++++++...+..++||||
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (291)
T cd05094 9 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEY 88 (291)
T ss_pred EeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEec
Confidence 567899999999999973 3466799999875433 345788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 768 LPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 768 ~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
+++|+|.+++.. ..+|..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~ 165 (291)
T cd05094 89 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIG 165 (291)
T ss_pred CCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEEC
Confidence 999999999864 257888999999999999999998 99999999999999999999999
Q ss_pred cccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccc
Q 002186 830 EFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 830 DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
|||+++....... ....+...|.+||+..+..++.++|||||||++|||+| |+.|+....... ......
T Consensus 166 dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------~~~~~~ 239 (291)
T cd05094 166 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE------VIECIT 239 (291)
T ss_pred CCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHh
Confidence 9999865432211 11112345778898888888999999999999999999 888875432111 000111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
...... ........+.+++.+||+.||++|||++||+++|+++.
T Consensus 240 ~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 240 QGRVLE---RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred CCCCCC---CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 111000 01122346779999999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=319.06 Aligned_cols=236 Identities=15% Similarity=0.145 Sum_probs=185.2
Q ss_pred hhccCCCCCceEEEeC----CCCcEEEEEEeeccc-----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 697 EEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
+.||+|+||.||++.. .+|+.||||.++... .....+.+|++++++++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5689999999999974 468899999997532 1234567899999999999999999999999999999999
Q ss_pred cCCCChhHHhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--C
Q 002186 768 LPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--S 843 (955)
Q Consensus 768 ~~~gsL~~~l~~~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~ 843 (955)
+++|+|.+++... ..+.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 9999999999753 45677778899999999999998 999999999999999999999999999864322211 1
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...++..|.+||+.....++.++|||||||++|||+||+.||....... ....+.... ...++ .....+.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~------~~~~~~~~~-~~~~~---~~~~~~~ 228 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK------TIDKILKGK-LNLPP---YLTPEAR 228 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH------HHHHHHcCC-CCCCC---CCCHHHH
Confidence 1224556888999888888899999999999999999999987432211 111111111 11111 1234567
Q ss_pred HHHHHccCCCCCCCC-----CHHHHHH
Q 002186 924 DVALLCTRSTPSDRP-----SMEEALK 945 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RP-----t~~ev~~ 945 (955)
+++.+|++.||++|| +++++++
T Consensus 229 ~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 229 DLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 889999999999999 7888765
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=311.60 Aligned_cols=246 Identities=19% Similarity=0.227 Sum_probs=192.1
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.+|+|+||.||++.. .++..+|||.+.... ...+.+.+|++++++++||||++++++|...+..++||||
T Consensus 9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (288)
T cd05093 9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 88 (288)
T ss_pred eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEc
Confidence 678899999999999973 345679999987543 2355788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc---------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccc
Q 002186 768 LPNGNLSEKIRT---------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 832 (955)
Q Consensus 768 ~~~gsL~~~l~~---------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfG 832 (955)
+++|+|.++++. ..++.+...++.|++.||+|||+. +|+||||||+||++++++.+|++|||
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg 165 (288)
T cd05093 89 MKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFG 165 (288)
T ss_pred CCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEeccCC
Confidence 999999999863 257888999999999999999998 99999999999999999999999999
Q ss_pred ccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccccccc
Q 002186 833 FKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNEN 907 (955)
Q Consensus 833 l~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (955)
+++....... ........|.+||......++.++|||||||++|||+| |..|+...... .....+....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~------~~~~~i~~~~ 239 (288)
T cd05093 166 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------EVIECITQGR 239 (288)
T ss_pred ccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCC
Confidence 9875432211 11112234678898888888999999999999999999 77776532210 0001111111
Q ss_pred ccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 908 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
...... .....+.+++.+||+.||.+|||++||.+.|+++..
T Consensus 240 ~~~~~~---~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 240 VLQRPR---TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred cCCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 000011 122457899999999999999999999999987753
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=311.53 Aligned_cols=245 Identities=20% Similarity=0.239 Sum_probs=189.5
Q ss_pred hhhhccCCCCCceEEEeCC------CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
..+.||+|+||.||+|+.. .+..||+|.+..... ..+.+.+|++.+++++|||||+++++|...+..++|||
T Consensus 4 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (290)
T cd05045 4 LGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVE 83 (290)
T ss_pred ccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEE
Confidence 6678999999999999842 346799998865332 34568889999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc--------------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 767 YLPNGNLSEKIRT--------------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 767 y~~~gsL~~~l~~--------------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
|+++|+|.+++.. ..++.+...++.|++.|++|||+. +|+||||||+||++
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~nill 160 (290)
T cd05045 84 YAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARNVLV 160 (290)
T ss_pred ecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---CeehhhhhhheEEE
Confidence 9999999998853 246778889999999999999988 99999999999999
Q ss_pred CCCCCceECcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
++++.+||+|||+++....... ........|.+||......++.++|||||||++|||+| |+.|+.+......+
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~- 239 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLF- 239 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHH-
Confidence 9999999999999875432211 11112234677888777788999999999999999999 88777532211100
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.......... .......++.+++..|++.+|++||+++|+++.|+++-
T Consensus 240 --~~~~~~~~~~------~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 240 --NLLKTGYRME------RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred --HHHhCCCCCC------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 0011111000 01122356778999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-34 Score=304.95 Aligned_cols=242 Identities=17% Similarity=0.218 Sum_probs=190.8
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.+|+|+||.||+|+..++..||||+++......+.+.+|++++++++||||+++++++.+ +..++||||+++|+|.
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~ 88 (262)
T cd05071 10 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 88 (262)
T ss_pred EeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCCCCcHH
Confidence 677899999999999998777789999998655556678899999999999999999998754 5689999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---ccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 847 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~~~ 847 (955)
++++. ..++..+..++.|+++||+|+|+. +|+||||||+||+++.++.+||+|||.++......... ...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~ 165 (262)
T cd05071 89 DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 165 (262)
T ss_pred HHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcc
Confidence 99975 357889999999999999999998 99999999999999999999999999987543322111 112
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||+.....++.++|||||||++|||+| |..|+...... ............ +...+....+.+++
T Consensus 166 ~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~------~~~~~~~~~~~~---~~~~~~~~~l~~li 236 (262)
T cd05071 166 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------EVLDQVERGYRM---PCPPECPESLHDLM 236 (262)
T ss_pred cceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH------HHHHHHhcCCCC---CCccccCHHHHHHH
Confidence 234678888877788999999999999999999 66566432211 001111111001 11123445678999
Q ss_pred HHccCCCCCCCCCHHHHHHHhhc
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
.+|++.||++||+++++.+.|+.
T Consensus 237 ~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 237 CQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred HHHccCCcccCCCHHHHHHHHHH
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=323.00 Aligned_cols=242 Identities=18% Similarity=0.141 Sum_probs=186.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
..+.||+|+||.||+|.. .+++.||+|+.. .+.+.+|++++++++|||||++++++..++..++||||+. ++|
T Consensus 96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L 169 (391)
T PHA03212 96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDL 169 (391)
T ss_pred EEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCH
Confidence 778899999999999985 588999999754 2346789999999999999999999999999999999995 789
Q ss_pred hHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---CCcccc
Q 002186 774 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---SFPAKI 848 (955)
Q Consensus 774 ~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~---~~~~~~ 848 (955)
.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....++
T Consensus 170 ~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt 246 (391)
T PHA03212 170 YCYLAAKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGT 246 (391)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCc
Confidence 888865 467888899999999999999998 999999999999999999999999999864322111 112245
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc-----ccc------------------ccccccc-
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK-----PID------------------GLLGEMY- 904 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~-----~~~------------------~~~~~~~- 904 (955)
..|.+||+.....++.++||||+||++|||+||+.|+......... ... ......+
T Consensus 247 ~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~ 326 (391)
T PHA03212 247 IATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYI 326 (391)
T ss_pred cCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHH
Confidence 6678899988888999999999999999999999887643221100 000 0000000
Q ss_pred ---ccc--ccCCCCch---HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 905 ---NEN--EVGSSSSL---QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 905 ---~~~--~~~~~~~~---~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
... .....+.+ .+...++.+++.+|++.||++|||++|+++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 327 GLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000 00001111 123456788999999999999999999985
|
|
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=306.88 Aligned_cols=244 Identities=20% Similarity=0.284 Sum_probs=192.0
Q ss_pred hhhhccCCCCCceEEEeCC-CC---cEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLP-TG---ITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g---~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.+|+|+||.||+|+.. +| ..||||+++... ...+.+..|++++++++||||+++.+++.+.+..++||||+
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (268)
T cd05063 9 KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYM 88 (268)
T ss_pred EeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcC
Confidence 6788999999999999864 33 379999987542 23556888999999999999999999999999999999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCc
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP 845 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~ 845 (955)
++|+|.++++. ..++.++..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||++...........
T Consensus 89 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 165 (268)
T cd05063 89 ENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTY 165 (268)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecccccccce
Confidence 99999999964 468899999999999999999998 999999999999999999999999999865432211110
Q ss_pred ----c-cccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 846 ----A-KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 846 ----~-~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....|.+||+.....++.++|||||||++|||+| |+.|+...... .....+...... +...+..
T Consensus 166 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~------~~~~~i~~~~~~---~~~~~~~ 236 (268)
T cd05063 166 TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH------EVMKAINDGFRL---PAPMDCP 236 (268)
T ss_pred eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH------HHHHHHhcCCCC---CCCCCCC
Confidence 0 1123678898887788999999999999999998 88888643211 011111111001 1111234
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.++.+++.+||+.+|++||++++|++.|+++
T Consensus 237 ~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 237 SAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 5678999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=318.25 Aligned_cols=241 Identities=15% Similarity=0.139 Sum_probs=183.4
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
.||+|+||.||+|.. .+|+.||+|+++... ...+.+.+|+.++.++ +|||||++++++.+++..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 689999999999995 578899999997532 2234567788887766 7999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 847 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~ 847 (955)
+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (329)
T cd05618 82 DLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence 99988865 467888889999999999999998 999999999999999999999999999864322111 11224
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCC--Cccccccc-cccccccccCCCCchHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ--NKPIDGLL-GEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
+..|.+||+..+..++.++|||||||++|||+||+.||....... ........ ..+.... ...+ ......+.+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p---~~~~~~~~~ 234 (329)
T cd05618 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIP---RSLSVKAAS 234 (329)
T ss_pred CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC-CCCC---CCCCHHHHH
Confidence 556788999988888999999999999999999999986211100 00000000 1111111 1111 122345678
Q ss_pred HHHHccCCCCCCCCC------HHHHHH
Q 002186 925 VALLCTRSTPSDRPS------MEEALK 945 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt------~~ev~~ 945 (955)
++.+||+.||++||+ +.|+++
T Consensus 235 ll~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05618 235 VLKSFLNKDPKERLGCHPQTGFADIQG 261 (329)
T ss_pred HHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence 899999999999998 467654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=309.01 Aligned_cols=243 Identities=17% Similarity=0.219 Sum_probs=191.1
Q ss_pred hhhhccCCCCCceEEEeCC------CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
..+.+|+|+||.||+|... +++.||||.++.... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 9 ~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 88 (280)
T cd05049 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFE 88 (280)
T ss_pred HHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEe
Confidence 7788999999999999853 357899999875433 35678899999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcC----------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECc
Q 002186 767 YLPNGNLSEKIRTK----------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830 (955)
Q Consensus 767 y~~~gsL~~~l~~~----------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~D 830 (955)
|+++|+|.++++.. .++.+...++.|++.|++|||+. +|+||||||+||+++.++.+|++|
T Consensus 89 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~kl~d 165 (280)
T cd05049 89 YMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVVKIGD 165 (280)
T ss_pred cCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeEEECC
Confidence 99999999999642 46777889999999999999998 999999999999999999999999
Q ss_pred ccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccccc
Q 002186 831 FGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 831 fGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
||+++....... ........|.+||+.....++.++|||||||++|||+| |+.||....... .......
T Consensus 166 ~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~------~~~~~~~ 239 (280)
T cd05049 166 FGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE------VIECITQ 239 (280)
T ss_pred cccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHHc
Confidence 999864322111 11112234778898888889999999999999999999 888876432110 0011111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
..... . .......+.+++.+||+.||++||+++||++.|++
T Consensus 240 ~~~~~-~--~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 240 GRLLQ-R--PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred CCcCC-C--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 11000 0 11223567789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=324.83 Aligned_cols=243 Identities=13% Similarity=0.126 Sum_probs=184.6
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||+||+|+ ..+|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..|+||||++
T Consensus 5 ~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~ 84 (381)
T cd05626 5 KIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 84 (381)
T ss_pred EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCC
Confidence 67889999999999998 4688999999997532 234567889999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC------
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD------ 841 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~------ 841 (955)
+|+|.+++.+ ..++.....++.|++.||+|||.. +|+||||||+|||++.++.+||+|||+++......
T Consensus 85 gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~ 161 (381)
T cd05626 85 GGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ 161 (381)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence 9999999865 356777778899999999999998 99999999999999999999999999875321000
Q ss_pred -------------------------------------------CCCcccccccCchhhhhccCCcccccchhHHHHHHHH
Q 002186 842 -------------------------------------------GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEI 878 (955)
Q Consensus 842 -------------------------------------------~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~El 878 (955)
.....++..|++||+.....++.++|||||||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el 241 (381)
T cd05626 162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM 241 (381)
T ss_pred ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence 0011245668899998888889999999999999999
Q ss_pred HhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH--ccCCCCCCCCCHHHHHHH
Q 002186 879 LTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL--CTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 879 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--Cl~~dp~~RPt~~ev~~~ 946 (955)
+||+.||........ ...... .......+... ....++.+++.+ |+..+|.+||+++|++++
T Consensus 242 ltG~~Pf~~~~~~~~--~~~i~~-~~~~~~~~~~~---~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 242 LVGQPPFLAPTPTET--QLKVIN-WENTLHIPPQV---KLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HhCCCCCcCCCHHHH--HHHHHc-cccccCCCCCC---CCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 999999975432110 000000 00000010011 112334455544 777888889999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=323.43 Aligned_cols=246 Identities=14% Similarity=0.082 Sum_probs=189.8
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|+++++.++||||+++++++.+++..|+|
T Consensus 44 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 44 DFD--VIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HcE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 355 778899999999999985 578999999997532 2344577899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 765 YDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
|||+++|+|.++++. ..+......++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++........
T Consensus 122 ~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~ 198 (370)
T cd05596 122 MEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV 198 (370)
T ss_pred EcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc
Confidence 999999999999876 456667778899999999999998 999999999999999999999999999875432211
Q ss_pred --CCcccccccCchhhhhcc----CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 843 --SFPAKIAWTESGEFYNAM----KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 843 --~~~~~~~~~~~~e~~~~~----~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
....++..|.+||+.... .++.++|||||||++|||+||+.||....... ....+.........+...
T Consensus 199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 272 (370)
T cd05596 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMDHKNSLTFPDDI 272 (370)
T ss_pred cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH------HHHHHHcCCCcCCCCCcC
Confidence 112355667888887543 37789999999999999999999987533211 111111110000011111
Q ss_pred HHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSD--RPSMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~--RPt~~ev~~~ 946 (955)
.....+.+++.+|+..+|++ |||++|++++
T Consensus 273 ~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 273 EISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 22356778889999999988 9999999764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-34 Score=304.12 Aligned_cols=242 Identities=18% Similarity=0.241 Sum_probs=191.8
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.+|+|+||.||+|...++..||+|.++......+.+.+|+.++++++||||+++++++. .+..++||||+++|+|.
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~ 88 (260)
T cd05070 10 LIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLL 88 (260)
T ss_pred hhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHH
Confidence 67889999999999999888889999999865555667889999999999999999999885 45689999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---ccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 847 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~~~ 847 (955)
++++. ..++.++..++.|++.|++|||+. +|+||||||+||++++++.+|++|||++.......... ...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 165 (260)
T cd05070 89 DFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKF 165 (260)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCC
Confidence 99964 368889999999999999999998 99999999999999999999999999987543221111 111
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||+.....++.++|||||||++|||+| |..||...... .....+...... +...+....+.+++
T Consensus 166 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~li 236 (260)
T cd05070 166 PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR------EVLEQVERGYRM---PCPQDCPISLHELM 236 (260)
T ss_pred CccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH------HHHHHHHcCCCC---CCCCcCCHHHHHHH
Confidence 223778888877788999999999999999999 67776532211 011111111001 11122335678999
Q ss_pred HHccCCCCCCCCCHHHHHHHhhc
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
.+|+..||++|||++++.+.|+.
T Consensus 237 ~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 237 LQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHcccCcccCcCHHHHHHHHhc
Confidence 99999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=312.03 Aligned_cols=247 Identities=20% Similarity=0.261 Sum_probs=181.1
Q ss_pred hhhhccCCCCCceEEEeC--CCCcEEEEEEeecccc---hHHHHHHHHHHHhcc---CCCCceeEeEEEEc-----CCee
Q 002186 695 ECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGAT---RIKIVSEFITRIGTV---RHKNLIRLLGFCYN-----RHQA 761 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~--~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l---~H~niv~l~g~~~~-----~~~~ 761 (955)
..+.||+|+||+||+|+. .+|+.||||+++.... ....+.+|+++++++ +|||||+++++|.. ....
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~ 84 (290)
T cd07862 5 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 84 (290)
T ss_pred eeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcE
Confidence 678899999999999985 3578899999875321 233455666666554 79999999999862 3568
Q ss_pred EEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
++||||++ |+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T cd07862 85 TLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 160 (290)
T ss_pred EEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence 99999996 699998864 357888899999999999999998 9999999999999999999999999998764
Q ss_pred cccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------ccccc-cc
Q 002186 838 QLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDG-LL 900 (955)
Q Consensus 838 ~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~~~~~-~~ 900 (955)
..... ....+...|.+||......++.++|||||||++|||+||+.||........ |.... ..
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 240 (290)
T cd07862 161 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 240 (290)
T ss_pred cCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhccc
Confidence 43221 122245568889988888889999999999999999999998874332110 00000 00
Q ss_pred cccccccccCCC-CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 901 GEMYNENEVGSS-SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 901 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...+........ ...++....+.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 241 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred chhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000000000000 000112345678999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-34 Score=302.37 Aligned_cols=240 Identities=21% Similarity=0.228 Sum_probs=188.9
Q ss_pred hhccCCCCCceEEEeCCCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 697 EEAARPQSAAGCKAVLPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
+.||+|+||.||+|...++..||+|.++.... ....+.+|++.+++++||||++++++|...+..++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988899999999875432 2446788999999999999999999999999999999999999999
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---cccc
Q 002186 775 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAKI 848 (955)
Q Consensus 775 ~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~~~~ 848 (955)
+++.. ..++.+...++.|++.|+.|+|.. +++||||||+||+++.++.+|++|||++.......... ....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIP 157 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCc
Confidence 99865 357889999999999999999988 99999999999999999999999999986433211111 1112
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
..|.+||+.....++.++|||||||++||++| |..||....... .......... . .........+.+++.
T Consensus 158 ~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~---~~~~~~~~~~---~---~~~~~~~~~~~~li~ 228 (250)
T cd05085 158 IKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ---AREQVEKGYR---M---SCPQKCPDDVYKVMQ 228 (250)
T ss_pred ccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH---HHHHHHcCCC---C---CCCCCCCHHHHHHHH
Confidence 33778898888888999999999999999999 777875321110 0000000000 0 001123356788999
Q ss_pred HccCCCCCCCCCHHHHHHHhh
Q 002186 928 LCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
+|++.+|++||++.|+++.|.
T Consensus 229 ~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 229 RCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHcccCcccCCCHHHHHHHhc
Confidence 999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=320.12 Aligned_cols=236 Identities=13% Similarity=0.072 Sum_probs=185.8
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
.||+|+||.||++.. .+|+.||||.++... .....+.+|++++++++||||+++.+++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 589999999999984 589999999997532 223456788999999999999999999999999999999999999
Q ss_pred hhHHhhc--CCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Cccc
Q 002186 773 LSEKIRT--KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAK 847 (955)
Q Consensus 773 L~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~~ 847 (955)
|.+++.. ..++.+...++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++........ ...+
T Consensus 82 L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (325)
T cd05594 82 LFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG 158 (325)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence 9998865 46788889999999999999996 6 8999999999999999999999999998643221111 1224
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
+..|.+||+.....++.++|||||||++|||+||+.||....... ....+.... ...+. .....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~------~~~~i~~~~-~~~p~---~~~~~~~~li~ 228 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK------LFELILMEE-IRFPR---TLSPEAKSLLS 228 (325)
T ss_pred CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHH------HHHHHhcCC-CCCCC---CCCHHHHHHHH
Confidence 556888999888888999999999999999999999986432110 001111111 11111 12245678888
Q ss_pred HccCCCCCCCC-----CHHHHHHH
Q 002186 928 LCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 928 ~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
+|++.||++|+ +++|++++
T Consensus 229 ~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 229 GLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHhhcCHHHhCCCCCCCHHHHhcC
Confidence 99999999996 89998754
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=304.54 Aligned_cols=248 Identities=16% Similarity=0.183 Sum_probs=190.4
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
.|. ....+|+|+||.||+|+. .+|+.||+|+++... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 10 ~y~--~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 10 DYE--LIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hcc--hhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 355 788999999999999995 688999999987533 2345678899999999999999999999999999999999
Q ss_pred cCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--C
Q 002186 768 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--S 843 (955)
Q Consensus 768 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~ 843 (955)
+++|+|.++++. ..++.....++.|+++|++|||+. +|+|||+||+||+++.++.+||+|||++........ .
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06646 88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRK 164 (267)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecccccccC
Confidence 999999999865 457788889999999999999998 999999999999999999999999999875432211 1
Q ss_pred CcccccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 844 FPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
...+...|.+||... ...++.++|||||||++|||+||+.|+............ .......+. . ........
T Consensus 165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~-~~~~~~~~~-~---~~~~~~~~ 239 (267)
T cd06646 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM-SKSNFQPPK-L---KDKTKWSS 239 (267)
T ss_pred ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheee-ecCCCCCCC-C---ccccccCH
Confidence 112334567888763 344678899999999999999999998643221110000 000111111 1 11112235
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHh
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALKLL 947 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~~L 947 (955)
.+.+++.+||..||++|||++++++.|
T Consensus 240 ~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 240 TFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 677899999999999999999998754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=311.61 Aligned_cols=249 Identities=20% Similarity=0.208 Sum_probs=185.9
Q ss_pred hhhhccCCCCCceEEEeCCC---------------CcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEc
Q 002186 695 ECEEAARPQSAAGCKAVLPT---------------GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYN 757 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~---------------g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 757 (955)
..+.||+|+||.||++.... ...||||+++... ...+.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 88 (295)
T cd05097 9 LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVS 88 (295)
T ss_pred ehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcC
Confidence 67889999999999987532 2358999987532 234568899999999999999999999999
Q ss_pred CCeeEEEEeecCCCChhHHhhcC--------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC
Q 002186 758 RHQAYLLYDYLPNGNLSEKIRTK--------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 823 (955)
Q Consensus 758 ~~~~~lv~ey~~~gsL~~~l~~~--------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~ 823 (955)
.+..++||||+++|+|.+++... .+|.++..++.|+++|++|||+. +++||||||+||+++.+
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nill~~~ 165 (295)
T cd05097 89 DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCLVGNH 165 (295)
T ss_pred CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEEEcCC
Confidence 99999999999999999998542 46788899999999999999998 99999999999999999
Q ss_pred CCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhC--CCCCCCCCCCCCcccc
Q 002186 824 MEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN--GRLTNAGSSLQNKPID 897 (955)
Q Consensus 824 ~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg--~~p~~~~~~~~~~~~~ 897 (955)
+.+|++|||++......... .......|.+||+.....++.++|||||||++|||+|+ ..|+..... . ....
T Consensus 166 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~-~-~~~~ 243 (295)
T cd05097 166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD-E-QVIE 243 (295)
T ss_pred CcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh-H-HHHH
Confidence 99999999998654322111 11122346778888777889999999999999999984 445542111 0 0000
Q ss_pred cccccccccccc-CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 898 GLLGEMYNENEV-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 898 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
...+....... ............+.+++.+||+.||++||+|++|++.|+.
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 244 -NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred -HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 00000000000 0000011123568899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-34 Score=307.49 Aligned_cols=244 Identities=18% Similarity=0.246 Sum_probs=185.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCc----EEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGI----TVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~----~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||+||+|.. ++|. .||+|.+..... ....+..|+..+++++|||||+++|++.. ...++|+||
T Consensus 11 ~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i~e~ 89 (279)
T cd05111 11 KLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLVTQL 89 (279)
T ss_pred eccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEEEEe
Confidence 678899999999999984 4555 477787754322 23567778888999999999999999864 457899999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
+++|+|.++++. ..+|.....++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++........
T Consensus 90 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T cd05111 90 SPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKY 166 (279)
T ss_pred CCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceeccCCCccc
Confidence 999999999964 457899999999999999999998 9999999999999999999999999998754322211
Q ss_pred ---CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 844 ---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 844 ---~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
...+...|.+||+..+..++.++|||||||++|||+| |+.|+....... ..+..........+ ....
T Consensus 167 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-------~~~~~~~~~~~~~~--~~~~ 237 (279)
T cd05111 167 FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE-------VPDLLEKGERLAQP--QICT 237 (279)
T ss_pred ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHHCCCcCCCC--CCCC
Confidence 1112334677888887889999999999999999998 887875322110 01111111000000 0112
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
..+.+++.+||..||++|||+.|+++.|..+.
T Consensus 238 ~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~ 269 (279)
T cd05111 238 IDVYMVMVKCWMIDENVRPTFKELANEFTRMA 269 (279)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 34677888999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=303.71 Aligned_cols=240 Identities=14% Similarity=0.174 Sum_probs=185.0
Q ss_pred hccCCCCCceEEEeC---CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 698 EAARPQSAAGCKAVL---PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~---~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
.||+|+||.||+|+. .++..||||.++.... ..+.+.+|++++++++|||||+++|+|.. +..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 389999999999974 3466799999875432 24568899999999999999999999864 57899999999999
Q ss_pred hhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---c-
Q 002186 773 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---P- 845 (955)
Q Consensus 773 L~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~- 845 (955)
|.+++.. ..++.+..+++.|+++|++|||+. +++||||||+||+++.++.+|++|||+++......... .
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 9999864 468889999999999999999998 99999999999999999999999999987543222111 1
Q ss_pred -ccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 846 -AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 846 -~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
.....|.+||......++.++|||||||++||+++ |+.|+....... ....+... .....+ .....++.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~---~~~~~~---~~~~~~l~ 228 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE---VMSFIEQG---KRLDCP---AECPPEMY 228 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHHHCC---CCCCCC---CCCCHHHH
Confidence 11234677888877788899999999999999997 888876432110 00000000 000001 12235677
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+++.+||+.||++||++.+|.+.|+.+
T Consensus 229 ~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 229 ALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=310.89 Aligned_cols=246 Identities=19% Similarity=0.254 Sum_probs=184.9
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|... +|+.||||+++.... ....+.+|++++++++|||||++++++.+++..++||||++ |
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~ 87 (303)
T cd07869 9 KLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-T 87 (303)
T ss_pred EeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-c
Confidence 7788999999999999964 799999999875322 23456789999999999999999999999999999999996 6
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcc
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPA 846 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~ 846 (955)
+|.+++.. ..+......++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 88 ~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 164 (303)
T cd07869 88 DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEV 164 (303)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCc
Confidence 88887764 357778889999999999999998 999999999999999999999999999865332211 1122
Q ss_pred cccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc----------------ccccccccccccc
Q 002186 847 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI----------------DGLLGEMYNENEV 909 (955)
Q Consensus 847 ~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~----------------~~~~~~~~~~~~~ 909 (955)
+...|.+||...+ ..++.++||||+||++|||+||+.||.+..+...... ...... ..+...
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 243 (303)
T cd07869 165 VTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH-FKPERF 243 (303)
T ss_pred ccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccc-cccccc
Confidence 4456788887654 4578889999999999999999999974322110000 000000 000000
Q ss_pred --CCCCchHH------HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 910 --GSSSSLQD------EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 910 --~~~~~~~~------~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.......+ ....+.+++.+|++.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 244 TLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000110 1235678899999999999999999986
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=317.10 Aligned_cols=236 Identities=17% Similarity=0.152 Sum_probs=184.2
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
.||+|+||+||+|+. .+|+.||||+++... ...+.+..|++++..+ +||||+++++++.+++..|+||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 589999999999985 468899999997532 2234566778888765 7999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 847 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~ 847 (955)
+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05591 82 DLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG 158 (321)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence 99998865 457888889999999999999998 999999999999999999999999999864322211 11224
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
+..|.+||+.....++.++||||+||++|||+||+.||...... .....+.... ...+. ....++.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~~~~~~~ll~ 228 (321)
T cd05591 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED------DLFESILHDD-VLYPV---WLSKEAVSILK 228 (321)
T ss_pred CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH------HHHHHHHcCC-CCCCC---CCCHHHHHHHH
Confidence 55688999988888999999999999999999999998743211 0111111111 00011 12245678889
Q ss_pred HccCCCCCCCC-------CHHHHHHH
Q 002186 928 LCTRSTPSDRP-------SMEEALKL 946 (955)
Q Consensus 928 ~Cl~~dp~~RP-------t~~ev~~~ 946 (955)
.|++.||++|| ++++++++
T Consensus 229 ~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 229 AFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 99999999999 78887753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=308.47 Aligned_cols=245 Identities=17% Similarity=0.151 Sum_probs=189.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.+|+|+||.||+|+. .+|+.||||.+.... ...+.+.+|++++++++||||++++++|..++..++||||+++|
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 84 (279)
T cd06619 5 YQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGG 84 (279)
T ss_pred heeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCC
Confidence 567899999999999984 588999999986542 23456888999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccccccc
Q 002186 772 NLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWT 851 (955)
Q Consensus 772 sL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~~ 851 (955)
+|..+. ..++.....++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||++............+...|
T Consensus 85 ~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y 159 (279)
T cd06619 85 SLDVYR--KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAY 159 (279)
T ss_pred ChHHhh--cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhh
Confidence 997553 457778889999999999999998 999999999999999999999999999875433222222344457
Q ss_pred CchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-ccccccccccccCCCCchHHHHHHHHHHHHHcc
Q 002186 852 ESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCT 930 (955)
Q Consensus 852 ~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl 930 (955)
.+||+.....++.++|||||||++|||+||+.||............ .......++...... ......++.+++.+|+
T Consensus 160 ~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l 237 (279)
T cd06619 160 MAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLP--VGQFSEKFVHFITQCM 237 (279)
T ss_pred cCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCC--CCcCCHHHHHHHHHHh
Confidence 7889888878899999999999999999999998642221111110 111111111101000 0112345778999999
Q ss_pred CCCCCCCCCHHHHHHH
Q 002186 931 RSTPSDRPSMEEALKL 946 (955)
Q Consensus 931 ~~dp~~RPt~~ev~~~ 946 (955)
+.||++||+++|++++
T Consensus 238 ~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 238 RKQPKERPAPENLMDH 253 (279)
T ss_pred hCChhhCCCHHHHhcC
Confidence 9999999999999864
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-34 Score=303.60 Aligned_cols=242 Identities=19% Similarity=0.253 Sum_probs=192.9
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.+|+|+||.||+|... |+.||||.++......+.+.+|+.++++++|+||+++++++.+.+..++||||+++|+|.
T Consensus 10 ~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 88 (256)
T cd05039 10 LGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLV 88 (256)
T ss_pred ceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHH
Confidence 6788999999999999874 889999999865545667888999999999999999999999989999999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCcccccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAW 850 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~ 850 (955)
++++. ..++.....++.|++.|++|||+. +|+||||||+||+++.++.+|++|||.++........ ......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~ 164 (256)
T cd05039 89 DYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDS-GKLPVK 164 (256)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccccc-CCCccc
Confidence 99965 358999999999999999999998 9999999999999999999999999998765322221 112223
Q ss_pred cCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 851 TESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 851 ~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
+.+||+.....++.++|||||||++|||++ |..|+..... .... ........ ..........+.+++.+|
T Consensus 165 ~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~-~~~~~~~~--~~~~~~~~~~~~~li~~~ 235 (256)
T cd05039 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL------KDVV-PHVEKGYR--MEAPEGCPPEVYKVMKDC 235 (256)
T ss_pred ccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH------HHHH-HHHhcCCC--CCCccCCCHHHHHHHHHH
Confidence 677888877788889999999999999998 8777653211 0000 00000000 001112235677899999
Q ss_pred cCCCCCCCCCHHHHHHHhhcc
Q 002186 930 TRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 930 l~~dp~~RPt~~ev~~~L~~~ 950 (955)
|..+|++|||++|++++|+.+
T Consensus 236 l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 236 WELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred hccChhhCcCHHHHHHHHhcC
Confidence 999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=315.49 Aligned_cols=234 Identities=18% Similarity=0.175 Sum_probs=181.7
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhc-cCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
.||+|+||+||+|.. .+|+.||||.++... ...+....|.+++.. .+||||+++++++.+++..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 589999999999995 468899999997532 223445566777765 58999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 847 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~ 847 (955)
+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05619 82 DLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG 158 (316)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecC
Confidence 99999975 468888899999999999999998 999999999999999999999999999864322111 11224
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
+..|.+||+..+..++.++|||||||++|||+||+.||...... .....+.... ...+. .....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~------~~~~~i~~~~-~~~~~---~~~~~~~~li~ 228 (316)
T cd05619 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE------ELFQSIRMDN-PCYPR---WLTREAKDILV 228 (316)
T ss_pred CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCC-CCCCc---cCCHHHHHHHH
Confidence 55688899988888999999999999999999999998643211 0111110001 00011 12245678889
Q ss_pred HccCCCCCCCCCHH-HHH
Q 002186 928 LCTRSTPSDRPSME-EAL 944 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~-ev~ 944 (955)
+|++.||++||++. ++.
T Consensus 229 ~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 229 KLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHhccCHhhcCCChHHHH
Confidence 99999999999997 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=331.78 Aligned_cols=241 Identities=15% Similarity=0.133 Sum_probs=189.1
Q ss_pred cchhhhccCCCCCceEEEeCC-C-CcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 693 STECEEAARPQSAAGCKAVLP-T-GITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 693 ~~~~~~~g~g~~g~vy~~~~~-~-g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
|...+.+|+|++|.||+|... + +..||+|++..... ....+.+|++++++++|||||+++++|...+..|+||||++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~ 148 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS 148 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence 337888999999999999853 4 67899998754332 34567789999999999999999999999999999999999
Q ss_pred CCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 770 NGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 770 ~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
+|+|.++++. ..++.+...++.|++.||+|+|+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 149 gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 9999988754 356777788999999999999998 999999999999999999999999999876533211
Q ss_pred ---CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 843 ---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 843 ---~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
....++..|.+||+.....++.++|||||||++|||+||+.||...... ............ +......
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~------~~~~~~~~~~~~---~~~~~~s 296 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR------EIMQQVLYGKYD---PFPCPVS 296 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCC---CCCccCC
Confidence 1122556688999988888999999999999999999999998643210 111111111100 0011223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..+.+++.+||+.||++||+++|++.
T Consensus 297 ~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 297 SGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHh
Confidence 45778899999999999999999874
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-34 Score=308.07 Aligned_cols=247 Identities=17% Similarity=0.235 Sum_probs=189.0
Q ss_pred hhcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 760 (955)
++|+ ..+.+|+|+||.||+|.. .++..||||+++... .....+.+|+.++++++|||||++++++.+.+.
T Consensus 6 ~~~~--~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 6 EKIT--MSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred HHce--eeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3466 778899999999999873 246789999986432 234567889999999999999999999999999
Q ss_pred eEEEEeecCCCChhHHhhcC------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceE
Q 002186 761 AYLLYDYLPNGNLSEKIRTK------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~~------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki 828 (955)
.++||||+++|+|.++++.. .+|.+...++.|+++|++|||+. +++||||||+||++++++.+|+
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 99999999999999998641 35777889999999999999998 9999999999999999999999
Q ss_pred CcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccc
Q 002186 829 AEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 903 (955)
Q Consensus 829 ~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 903 (955)
+|||+++....... ........|.+||+.....++.++|||||||++|||+| |..|+..... .. .....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-~~-----~~~~~ 234 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-EQ-----VLRFV 234 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HH-----HHHHH
Confidence 99999865432211 11112334778898887788999999999999999999 5666643211 10 00000
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 904 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
......... ......+.+++.+|++.||++|||+.|++++|++
T Consensus 235 ~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 235 MEGGLLDKP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HcCCcCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 011100001 1223457789999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-34 Score=304.11 Aligned_cols=239 Identities=16% Similarity=0.175 Sum_probs=185.0
Q ss_pred hccCCCCCceEEEeC---CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 698 EAARPQSAAGCKAVL---PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~---~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
+||+|+||.||+|.. .++..||||+++.... ..+.+.+|+.++++++||||++++|++.. +..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 589999999999963 4688999999865332 35578889999999999999999999864 5678999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC----Cc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----FP 845 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~----~~ 845 (955)
+|.+++.. ..++.....++.|++.|++|+|.. +|+||||||+||+++.++.+||+|||+++........ ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 99999965 457888899999999999999998 9999999999999999999999999998754332211 00
Q ss_pred -ccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 846 -AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 846 -~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
.....+.+||......++.++|||||||++|||+| |+.||....... ....+..... ...+ ......+.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~i~~~~~---~~~~---~~~~~~l~ 228 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE---VTQMIESGER---MECP---QRCPPEMY 228 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHCCCC---CCCC---CCCCHHHH
Confidence 11123667888777778889999999999999998 888876432110 0011111000 0011 12234577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
+++.+||+.||++||++++|++.|+.
T Consensus 229 ~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 229 DLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHHHhccCchhCcCHHHHHHHHhc
Confidence 89999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=306.27 Aligned_cols=242 Identities=23% Similarity=0.300 Sum_probs=186.0
Q ss_pred hhccCCCCCceEEEeCC-CCc--EEEEEEeecc--cchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 697 EEAARPQSAAGCKAVLP-TGI--TVSVKKIEWG--ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~-~g~--~vAvK~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
+.+|+|+||.||+|... +|. .+|+|.++.. ....+.+.+|++++.++ +||||++++++|...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999964 444 4788888742 22345788899999999 799999999999999999999999999
Q ss_pred CChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccc
Q 002186 771 GNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 832 (955)
Q Consensus 771 gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfG 832 (955)
|+|.++++. .+++.+...++.|++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 999999864 246888899999999999999988 99999999999999999999999999
Q ss_pred ccccccccCCCC-cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccC
Q 002186 833 FKYLTQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 833 l~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
++.......... ......|.+||+.....++.++|||||||++|||+| |+.||..... . ............
T Consensus 158 l~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-~-----~~~~~~~~~~~~- 230 (270)
T cd05047 158 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-A-----ELYEKLPQGYRL- 230 (270)
T ss_pred CccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-H-----HHHHHHhCCCCC-
Confidence 975322111111 111223678898888888999999999999999997 8888753221 0 001111000000
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+........+.+++.+||+.||.+|||++|+++.|+.+
T Consensus 231 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 231 --EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred --CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 00111234577999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-34 Score=320.78 Aligned_cols=245 Identities=17% Similarity=0.191 Sum_probs=187.4
Q ss_pred hhhhccCCCCCceEEEeCC------CCcEEEEEEeecccc--hHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT--RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||.||+|+.. +++.||||+++.... ..+.+.+|+++++++. |||||+++|+|..++..++||
T Consensus 41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~ 120 (401)
T cd05107 41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIIT 120 (401)
T ss_pred hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEE
Confidence 6789999999999999842 456899999975422 2446788999999997 999999999999999999999
Q ss_pred eecCCCChhHHhhcC-----------------------------------------------------------------
Q 002186 766 DYLPNGNLSEKIRTK----------------------------------------------------------------- 780 (955)
Q Consensus 766 ey~~~gsL~~~l~~~----------------------------------------------------------------- 780 (955)
|||++|+|.+++++.
T Consensus 121 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (401)
T cd05107 121 EYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVK 200 (401)
T ss_pred eccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhh
Confidence 999999999998641
Q ss_pred -----------------------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC
Q 002186 781 -----------------------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825 (955)
Q Consensus 781 -----------------------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~ 825 (955)
++|.+...++.|+++||+|||+. +|+||||||+|||++.++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl~~~~~ 277 (401)
T cd05107 201 YADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLICEGKL 277 (401)
T ss_pred hhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEEeCCCE
Confidence 24556678999999999999988 9999999999999999999
Q ss_pred ceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccc
Q 002186 826 PHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 900 (955)
Q Consensus 826 ~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 900 (955)
+|++|||+++........ .......|.+||......++.++|||||||++|||++ |+.|+....... ..
T Consensus 278 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~------~~ 351 (401)
T cd05107 278 VKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE------QF 351 (401)
T ss_pred EEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH------HH
Confidence 999999998754221110 1112234677888877778899999999999999998 777765321110 00
Q ss_pred cccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 901 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+....... .+.......++.+++.+||..+|.+||+++||++.|+.+
T Consensus 352 ~~~~~~~~~--~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 352 YNAIKRGYR--MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 011111000 000111235677888999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-34 Score=304.52 Aligned_cols=244 Identities=19% Similarity=0.241 Sum_probs=184.9
Q ss_pred hhccCCCCCceEEEeCC----CCcEEEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEc-CCeeEEEEeecC
Q 002186 697 EEAARPQSAAGCKAVLP----TGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYDYLP 769 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ey~~ 769 (955)
+.||+|+||.||+|... ++..||+|++... ....+.+.+|+.++++++||||++++++|.. ++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 36899999999999843 3467999998542 2235677889999999999999999998864 556899999999
Q ss_pred CCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC-----
Q 002186 770 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD----- 841 (955)
Q Consensus 770 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~----- 841 (955)
+|+|.+++++ ...+.....++.|+++|++|||+. +|+||||||+||+++.++.+|++|||+++......
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 9999999975 346777888999999999999998 99999999999999999999999999986432211
Q ss_pred -CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 842 -GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 842 -~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
.........|.+||+.....++.++|||||||++|||+||+.|+........ .............. .....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~~~ 229 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD-----ITVYLLQGRRLLQP---EYCPD 229 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHhcCCCCCCC---CcCCH
Confidence 0011123346788888777889999999999999999997666543221111 01111111101101 11234
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+.+++..||+.+|++||++.|+++.|+++.
T Consensus 230 ~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 230 PLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 6779999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=303.65 Aligned_cols=242 Identities=19% Similarity=0.264 Sum_probs=192.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..++||+|+||.||+|...+++.||||.+.......+.+.+|++++++++||||+++++++. .+..++||||+++|+|.
T Consensus 10 ~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 88 (260)
T cd05067 10 LVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLV 88 (260)
T ss_pred eeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHH
Confidence 67889999999999999999999999999876666678889999999999999999999874 46789999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---ccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 847 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~~~ 847 (955)
+++.. ..++.++..++.|++.||+|||+. +++||||||+||+++.++.++++|||++.......... ...
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 165 (260)
T cd05067 89 DFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKF 165 (260)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcc
Confidence 99864 457888999999999999999988 99999999999999999999999999986544221111 111
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||+.....++.++|||||||++|||+| |+.||....... . ......... . +.......++.+++
T Consensus 166 ~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~-~~~~~~~~~---~---~~~~~~~~~~~~li 236 (260)
T cd05067 166 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE--V-IQNLERGYR---M---PRPDNCPEELYELM 236 (260)
T ss_pred cccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH--H-HHHHHcCCC---C---CCCCCCCHHHHHHH
Confidence 234678898887888899999999999999999 888876332110 0 000101100 0 01111234678899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhc
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
.+|+..+|++|||++++.+.|+.
T Consensus 237 ~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 237 RLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHccCChhhCCCHHHHHHHhhc
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=312.29 Aligned_cols=245 Identities=21% Similarity=0.280 Sum_probs=187.6
Q ss_pred hhhhccCCCCCceEEEeCC-CCc--EEEEEEeecc--cchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGI--TVSVKKIEWG--ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~--~vAvK~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.||+|+||+||+|... +|. .+|+|.++.. ....+.+.+|+++++++ +||||+++++++...+..++||||+
T Consensus 6 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 85 (297)
T cd05089 6 FEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYA 85 (297)
T ss_pred eeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEec
Confidence 6678999999999999864 443 4788888742 22345688899999999 7999999999999999999999999
Q ss_pred CCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECc
Q 002186 769 PNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830 (955)
Q Consensus 769 ~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~D 830 (955)
++|+|.++++. ..++.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~d 162 (297)
T cd05089 86 PYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLASKIAD 162 (297)
T ss_pred CCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeEEECC
Confidence 99999999964 246778889999999999999998 999999999999999999999999
Q ss_pred ccccccccccCCCCcc-cccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccc
Q 002186 831 FGFKYLTQLADGSFPA-KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENE 908 (955)
Q Consensus 831 fGl~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (955)
||++............ ....|.+||+.....++.++|||||||++|||+| |+.||....... ..........
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~------~~~~~~~~~~ 236 (297)
T cd05089 163 FGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE------LYEKLPQGYR 236 (297)
T ss_pred cCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH------HHHHHhcCCC
Confidence 9998643211111111 1223677888887788999999999999999998 888876432110 0011111000
Q ss_pred cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 909 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
...+ ......+.+++.+||+.+|.+|||++|+++.|+.+.
T Consensus 237 ~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 237 MEKP---RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred CCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0001 122345778999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-34 Score=314.63 Aligned_cols=241 Identities=15% Similarity=0.130 Sum_probs=184.6
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|+.++.++ +|||||++++++.+++..|+|||||++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 589999999999985 478999999997532 2234577888888888 6999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 847 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~ 847 (955)
+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (329)
T cd05588 82 DLMFHMQRQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence 99998864 568888899999999999999998 999999999999999999999999999864221111 11224
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCC--Ccccccc-ccccccccccCCCCchHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ--NKPIDGL-LGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
+..|.+||+..+..++.++|||||||++|||+||+.||....... ....... ...+.... ...+. .....+.+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~---~~~~~~~~ 234 (329)
T cd05588 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ-IRIPR---SLSVKASS 234 (329)
T ss_pred CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC-CCCCC---CCCHHHHH
Confidence 556788999888888999999999999999999999986321110 0000000 11111111 11111 12345678
Q ss_pred HHHHccCCCCCCCCC------HHHHHH
Q 002186 925 VALLCTRSTPSDRPS------MEEALK 945 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt------~~ev~~ 945 (955)
++.+|++.||++||+ ++|+++
T Consensus 235 li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 235 VLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 889999999999997 677764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=316.58 Aligned_cols=230 Identities=18% Similarity=0.166 Sum_probs=180.6
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
.||+|+||+||+|+. .+|+.||||+++... ...+.+..|++++... +||||+++++++.+.+..|+||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 689999999999995 478999999997532 2344566777888765 6999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC--CCCccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSFPAK 847 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~--~~~~~~ 847 (955)
+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .....+
T Consensus 82 ~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (320)
T cd05590 82 DLMFHIQKSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG 158 (320)
T ss_pred hHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence 99998865 467888889999999999999998 99999999999999999999999999986432211 111224
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
+..|.+||......++.++|||||||++|||+||+.||...... .....+.... ...+. .....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~------~~~~~i~~~~-~~~~~---~~~~~~~~li~ 228 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED------DLFEAILNDE-VVYPT---WLSQDAVDILK 228 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH------HHHHHHhcCC-CCCCC---CCCHHHHHHHH
Confidence 55688899988888899999999999999999999998743211 1111111111 11111 12345678889
Q ss_pred HccCCCCCCCCCH
Q 002186 928 LCTRSTPSDRPSM 940 (955)
Q Consensus 928 ~Cl~~dp~~RPt~ 940 (955)
+|++.||++||++
T Consensus 229 ~~L~~dP~~R~~~ 241 (320)
T cd05590 229 AFMTKNPTMRLGS 241 (320)
T ss_pred HHcccCHHHCCCC
Confidence 9999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=321.67 Aligned_cols=242 Identities=15% Similarity=0.099 Sum_probs=187.7
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (330)
T cd05601 5 VKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQP 84 (330)
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCC
Confidence 678899999999999985 5799999999976432 34567889999999999999999999999999999999999
Q ss_pred CCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---C
Q 002186 770 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---S 843 (955)
Q Consensus 770 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~---~ 843 (955)
+|+|.+++.+ ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 85 ~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~ 161 (330)
T cd05601 85 GGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSK 161 (330)
T ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeee
Confidence 9999999975 467888888999999999999998 999999999999999999999999999875433221 1
Q ss_pred CcccccccCchhhhh------ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 844 FPAKIAWTESGEFYN------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~------~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
...++..|.+||+.. ...++.++|||||||++|||+||+.||........ ...+.........+....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~------~~~i~~~~~~~~~~~~~~ 235 (330)
T cd05601 162 LPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT------YNNIMNFQRFLKFPEDPK 235 (330)
T ss_pred cccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH------HHHHHcCCCccCCCCCCC
Confidence 123455688889876 34567889999999999999999999875432110 011110000000011111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+.+++..|+. +|++|||+++++++
T Consensus 236 ~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 236 VSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 23456677788887 99999999998853
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=306.78 Aligned_cols=239 Identities=15% Similarity=0.132 Sum_probs=183.9
Q ss_pred ccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 699 AARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 699 ~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
||+|+||.||++.. .+|+.||+|++..... ..+.+..|++++++++||||+++++++.++...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 68999999999985 5799999999964221 233456689999999999999999999999999999999999999
Q ss_pred hHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-Ccccc
Q 002186 774 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-FPAKI 848 (955)
Q Consensus 774 ~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-~~~~~ 848 (955)
.+++.. ..++.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......... ...+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~ 157 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGT 157 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCC
Confidence 988854 357888889999999999999998 9999999999999999999999999998654332211 12234
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..|.+||+.....++.++||||+||++|||+||+.|+........ ............ .... ......++.+++.+
T Consensus 158 ~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~-~~~~--~~~~~~~~~~li~~ 232 (277)
T cd05607 158 NGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA--KEELKRRTLEDE-VKFE--HQNFTEESKDICRL 232 (277)
T ss_pred CCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh--HHHHHHHhhccc-cccc--cccCCHHHHHHHHH
Confidence 457888988887899999999999999999999999864321110 001111111111 0000 01223457789999
Q ss_pred ccCCCCCCCCCHHHHHH
Q 002186 929 CTRSTPSDRPSMEEALK 945 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~ 945 (955)
||+.||++||+++|+++
T Consensus 233 ~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 233 FLAKKPEDRLGSREKND 249 (277)
T ss_pred HhccCHhhCCCCccchh
Confidence 99999999999976653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=309.05 Aligned_cols=246 Identities=16% Similarity=0.213 Sum_probs=194.4
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
.+|. ..+.+|+|++|.||+|.. .+|+.||+|.+..... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 20 ~~y~--~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e 97 (296)
T cd06654 20 KKYT--RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (296)
T ss_pred ccee--eEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence 3455 778899999999999984 5789999999875433 35667889999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 767 YLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 767 y~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
|+++|+|.+++++ ..++.+...++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 98 ~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 174 (296)
T cd06654 98 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (296)
T ss_pred ccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccccccccC
Confidence 9999999999876 468888999999999999999998 9999999999999999999999999987654322211
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+...|.+||.......+.++|||||||++|||+||+.||........+. .. .....+. ..........+.
T Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~-~~----~~~~~~~--~~~~~~~~~~l~ 247 (296)
T cd06654 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LI----ATNGTPE--LQNPEKLSAIFR 247 (296)
T ss_pred cccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH-HH----hcCCCCC--CCCccccCHHHH
Confidence 1224445778898887778899999999999999999999987443211110 00 0011000 111122335577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+++.+||..||++|||++|+++.
T Consensus 248 ~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 248 DFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHHCcCCcccCcCHHHHhhC
Confidence 89999999999999999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=315.24 Aligned_cols=235 Identities=17% Similarity=0.167 Sum_probs=181.8
Q ss_pred hhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhc-cCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 697 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
+.||+|+||.||+|+. .+|+.||||.++... ...+....|++++.. .+||||+++++++.+++..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 3689999999999995 478999999997532 223445566777764 5899999999999999999999999999
Q ss_pred CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcc
Q 002186 771 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPA 846 (955)
Q Consensus 771 gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~ 846 (955)
|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccC
Confidence 999999865 457888889999999999999998 999999999999999999999999999864321111 1122
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
++..|.+||+..+..++.++||||+||++|||+||+.||....... ....+.... ...+. ....++.+++
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~------~~~~~~~~~-~~~~~---~~~~~~~~li 227 (316)
T cd05620 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE------LFESIRVDT-PHYPR---WITKESKDIL 227 (316)
T ss_pred CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CCCCC---CCCHHHHHHH
Confidence 4556888999988889999999999999999999999987432110 111111111 00011 1234567888
Q ss_pred HHccCCCCCCCCCHH-HHH
Q 002186 927 LLCTRSTPSDRPSME-EAL 944 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~-ev~ 944 (955)
.+|++.||++||++. ++.
T Consensus 228 ~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 228 EKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHccCCHHHcCCChHHHH
Confidence 999999999999984 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=305.92 Aligned_cols=244 Identities=19% Similarity=0.219 Sum_probs=184.1
Q ss_pred hhhhccCCCCCceEEEeCCC-Cc--EEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcC------CeeE
Q 002186 695 ECEEAARPQSAAGCKAVLPT-GI--TVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------HQAY 762 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~-g~--~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------~~~~ 762 (955)
..+.||+|+||.||+|...+ +. .||||.++... ...+.+.+|++.+++++||||++++++|... ...+
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence 45789999999999999643 33 69999886532 2355678899999999999999999988542 2468
Q ss_pred EEEeecCCCChhHHhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccc
Q 002186 763 LLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~ 834 (955)
+||||+++|+|.+++.. ..++.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCcc
Confidence 99999999999988732 257888899999999999999998 9999999999999999999999999998
Q ss_pred ccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccccccccc
Q 002186 835 YLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 835 ~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
+....... ........+.+||+.....++.++|||||||++|||++ |+.|+..... .. ...........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~-----~~~~~~~~~~~ 233 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-SE-----IYDYLRQGNRL 233 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-HH-----HHHHHHcCCCC
Confidence 76432211 11112233667788877788999999999999999999 6666653211 10 00011111101
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
... ......+.+++.+||+.||++|||++|+++.|+.+
T Consensus 234 ~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 234 KQP---PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111 12234577899999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-34 Score=311.96 Aligned_cols=245 Identities=23% Similarity=0.289 Sum_probs=187.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCc--EEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGI--TVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~--~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.||+|+||+||+|.. .+|. .+|+|+++... ...+.+.+|++++.++ +||||+++++++.+++..|+||||+
T Consensus 11 ~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 90 (303)
T cd05088 11 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 90 (303)
T ss_pred eeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeC
Confidence 667899999999999985 3564 46888876422 2345678899999999 8999999999999999999999999
Q ss_pred CCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECc
Q 002186 769 PNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830 (955)
Q Consensus 769 ~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~D 830 (955)
++|+|.+++++ .+++.+...++.|+++|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~kl~d 167 (303)
T cd05088 91 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 167 (303)
T ss_pred CCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcEEeCc
Confidence 99999999964 246778899999999999999998 999999999999999999999999
Q ss_pred ccccccccccCCCC-cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccc
Q 002186 831 FGFKYLTQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENE 908 (955)
Q Consensus 831 fGl~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (955)
||+++......... ......|.+||+.....++.++|||||||++|||+| |..||...... . ..........
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~-----~~~~~~~~~~ 241 (303)
T cd05088 168 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-E-----LYEKLPQGYR 241 (303)
T ss_pred cccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-H-----HHHHHhcCCc
Confidence 99986432111111 111223677888877788999999999999999998 88887532211 0 0001101000
Q ss_pred cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 909 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
. +........+.+++.+||+.+|++||++++++.+|+.+.
T Consensus 242 ~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 242 L---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred C---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0 001112345778999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=313.78 Aligned_cols=234 Identities=18% Similarity=0.183 Sum_probs=179.6
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhc-cCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
.||+|+||+||+|.. .+|+.||||.++... ...+....|.+++.. .+||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 589999999999985 578899999997532 123334455666654 58999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 847 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~ 847 (955)
+|.+++.. ..+..+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g 158 (316)
T cd05592 82 DLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG 158 (316)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence 99999865 457777888999999999999998 999999999999999999999999999875322211 11224
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
+..|.+||...+..++.++|||||||++|||++|+.||...... .....+....+. .+. .....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~~~-~~~---~~~~~~~~ll~ 228 (316)
T cd05592 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED------ELFDSILNDRPH-FPR---WISKEAKDCLS 228 (316)
T ss_pred CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCCC-CCC---CCCHHHHHHHH
Confidence 56688899988888899999999999999999999998743211 111111111100 011 12244668888
Q ss_pred HccCCCCCCCCCHH-HHH
Q 002186 928 LCTRSTPSDRPSME-EAL 944 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~-ev~ 944 (955)
+||+.||++||++. ++.
T Consensus 229 ~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 229 KLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHccCCHHHcCCChHHHH
Confidence 99999999999876 443
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-34 Score=315.56 Aligned_cols=238 Identities=18% Similarity=0.167 Sum_probs=184.2
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHH---HhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~---l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|+++ +++++||||+++++++.+.+..|+|||
T Consensus 3 i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E 82 (324)
T cd05589 3 CLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVME 82 (324)
T ss_pred EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEc
Confidence 567899999999999984 579999999997532 123445556554 457789999999999999999999999
Q ss_pred ecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--C
Q 002186 767 YLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--S 843 (955)
Q Consensus 767 y~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~ 843 (955)
|+++|+|...++. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 83 ~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05589 83 YAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTS 159 (324)
T ss_pred CCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCccc
Confidence 9999999998875 568999999999999999999998 999999999999999999999999999764322111 1
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+...|.+||......++.++|||||||++|||+||+.||...... .....+.... ...+. .....+.
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~------~~~~~i~~~~-~~~p~---~~~~~~~ 229 (324)
T cd05589 160 TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE------EVFDSIVNDE-VRYPR---FLSREAI 229 (324)
T ss_pred ccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCC-CCCCC---CCCHHHH
Confidence 122455688899988888899999999999999999999998643211 0111111111 00111 1234567
Q ss_pred HHHHHccCCCCCCCC-----CHHHHHH
Q 002186 924 DVALLCTRSTPSDRP-----SMEEALK 945 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RP-----t~~ev~~ 945 (955)
+++.+|++.||++|| +++++++
T Consensus 230 ~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 230 SIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred HHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 889999999999999 4666654
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=302.53 Aligned_cols=242 Identities=16% Similarity=0.217 Sum_probs=190.2
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
....||+|++|.||+|...++..||+|++..+....+.+.+|++++++++|||++++++++. .+..++||||+++|+|.
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 88 (260)
T cd05069 10 LDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLL 88 (260)
T ss_pred eeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHH
Confidence 66789999999999999877778999998765555667888999999999999999999875 45689999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---ccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 847 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~~~ 847 (955)
++++. ..+|..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|||+++......... ...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 165 (260)
T cd05069 89 DFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKF 165 (260)
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCcc
Confidence 99965 257889999999999999999998 99999999999999999999999999987543221111 111
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||+.....++.++|||||||++|||+| |+.|+.+..... ....+...... +........+.+++
T Consensus 166 ~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~------~~~~~~~~~~~---~~~~~~~~~~~~li 236 (260)
T cd05069 166 PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE------VLEQVERGYRM---PCPQGCPESLHELM 236 (260)
T ss_pred chhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCC---CCCcccCHHHHHHH
Confidence 223677888877788999999999999999999 777775322111 00111110001 11122345677899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhc
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
.+||+.||++||++++|.+.|+.
T Consensus 237 ~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 237 KLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHccCCcccCcCHHHHHHHHhc
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=309.85 Aligned_cols=243 Identities=15% Similarity=0.108 Sum_probs=188.8
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||++.. .+|+.||||++..... ....+.+|++++++++|||||++++++.+++..++||||++
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05605 4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN 83 (285)
T ss_pred EEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccC
Confidence 667899999999999985 5799999999975322 23446789999999999999999999999999999999999
Q ss_pred CCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-C
Q 002186 770 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-F 844 (955)
Q Consensus 770 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-~ 844 (955)
+|+|.+++.. ..++.....++.|+++|++|||+. +|+||||||+||++++++.+||+|||++......... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 84 GGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred CCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 9999988853 367888899999999999999998 9999999999999999999999999998754322211 1
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..+...|.+||+.....++.++||||+||++|||++|+.||........ .. .+......... .........+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~--~~-~~~~~~~~~~~---~~~~~~~~~~~~ 234 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK--RE-EVERRVKEDQE---EYSEKFSEAARS 234 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH--HH-HHHHHhhhccc---ccCcccCHHHHH
Confidence 1234457788988878889999999999999999999999874322110 00 01111111101 111123345778
Q ss_pred HHHHccCCCCCCCC-----CHHHHHHH
Q 002186 925 VALLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 925 l~~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
++.+||+.||++|| ++++++++
T Consensus 235 li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 235 ICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 99999999999999 88888653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=306.00 Aligned_cols=244 Identities=16% Similarity=0.091 Sum_probs=188.6
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|+ ....||+|+||.||.|+ ..+|..+|+|++++.. .+.+-+..|-.+|...++|.||+|+-.|++.+..|||
T Consensus 142 DFe--~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 142 DFE--LLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cch--hheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 366 88899999999999998 5689999999998743 2345677888999999999999999999999999999
Q ss_pred EeecCCCChhHHhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc---
Q 002186 765 YDYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL--- 839 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~--- 839 (955)
|||+||||+..+|.+. ++......++.+++.|++-+|+. ++|||||||+|+|||..|++|++|||++.-...
T Consensus 220 MEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred EEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhhhhh
Confidence 9999999999999873 44455566888899999999999 999999999999999999999999998742110
Q ss_pred ------------c---------C-----C--------------------CCcccccccCchhhhhccCCcccccchhHHH
Q 002186 840 ------------A---------D-----G--------------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGE 873 (955)
Q Consensus 840 ------------~---------~-----~--------------------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gv 873 (955)
. . . ....+++-|.+||+..+..|+..+|.||+||
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ 376 (550)
T KOG0605|consen 297 IESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGC 376 (550)
T ss_pred hhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHH
Confidence 0 0 0 0122466688999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCC---HHHHHH
Q 002186 874 IILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS---MEEALK 945 (955)
Q Consensus 874 vl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt---~~ev~~ 945 (955)
|||||+.|-+||........|.........+. .+.......+..+++.+|+. ||++|-. ++||-+
T Consensus 377 ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~------fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 377 IMYEMLVGYPPFCSETPQETYRKIVNWRETLK------FPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc------CCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence 99999999999986654433222111111111 11111222567788888877 9999964 666644
|
|
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=304.89 Aligned_cols=244 Identities=19% Similarity=0.271 Sum_probs=186.9
Q ss_pred hhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCe------e
Q 002186 695 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ------A 761 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~------~ 761 (955)
..+.+|+|+||+||+|... ++..||||+++... ...+.+.+|++.+++++||||+++++++.+.+. .
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05035 3 LGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKP 82 (273)
T ss_pred cccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCccc
Confidence 5678999999999999853 34789999987532 234578889999999999999999999876544 7
Q ss_pred EEEEeecCCCChhHHhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccc
Q 002186 762 YLLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl 833 (955)
++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 83 ~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 83 MVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred EEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCccc
Confidence 999999999999998843 357888889999999999999998 999999999999999999999999999
Q ss_pred cccccccCCCC----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccc
Q 002186 834 KYLTQLADGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENE 908 (955)
Q Consensus 834 ~~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (955)
++......... ......+.+||+.....++.++|||||||++|||++ |..|+...... . ..........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-~-----~~~~~~~~~~ 233 (273)
T cd05035 160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-E-----IYDYLRHGNR 233 (273)
T ss_pred eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-H-----HHHHHHcCCC
Confidence 87543322111 111223567788777788999999999999999999 66666432211 0 1111111110
Q ss_pred cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 909 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.. ........+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 234 ~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 234 LK---QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC---CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 1112345678899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=319.38 Aligned_cols=233 Identities=16% Similarity=0.117 Sum_probs=183.3
Q ss_pred hhccCCCCCceEEEeC----CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 697 EEAARPQSAAGCKAVL----PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
+.||+|+||.||++.. .+|+.||||+++.... ....+.+|++++++++|||||++++++.+++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 4689999999999873 4789999999975322 23456778999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Cc
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FP 845 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~ 845 (955)
+|+|.+++.+ ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ..
T Consensus 82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 9999999975 467888899999999999999998 9999999999999999999999999998754332111 12
Q ss_pred ccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 846 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
.+...|.+||......++.++|||||||++|||+||+.||...... .....+.... ...+. .....+.++
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~------~~~~~i~~~~-~~~p~---~~~~~~~~l 228 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK------ETMTMILKAK-LGMPQ---FLSPEAQSL 228 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH------HHHHHHHcCC-CCCCC---CCCHHHHHH
Confidence 2455578899888888899999999999999999999998643211 0111111111 11111 123456788
Q ss_pred HHHccCCCCCCCCCHHH
Q 002186 926 ALLCTRSTPSDRPSMEE 942 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~e 942 (955)
+.+||+.||++||++.+
T Consensus 229 i~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 229 LRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHhhcCHhHcCCCCC
Confidence 88999999999999544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=304.76 Aligned_cols=243 Identities=17% Similarity=0.222 Sum_probs=187.4
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcC------Cee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR------HQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~------~~~ 761 (955)
.|. ..+.+|+|+||+||+|.. .+++.||+|.+.........+..|++++.++ +||||++++++|... +..
T Consensus 7 ~y~--~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (272)
T cd06637 7 IFE--LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 84 (272)
T ss_pred hhh--HHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence 355 678899999999999985 4788999999976555566788899999988 699999999998752 468
Q ss_pred EEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
++||||+++|+|.+++.. ..++.....++.|++.|++|||+. +|+|||+||+||+++.++.+||+|||+++..
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 999999999999999875 357888889999999999999998 9999999999999999999999999998754
Q ss_pred cccCCC--CcccccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 838 QLADGS--FPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 838 ~~~~~~--~~~~~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
...... ...+...|.+||+.. ...++.++|||||||++|||++|+.|+........... ......+. .
T Consensus 162 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~---~~~~~~~~-~- 236 (272)
T cd06637 162 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL---IPRNPAPR-L- 236 (272)
T ss_pred ccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH---HhcCCCCC-C-
Confidence 322111 122344577888775 23577889999999999999999999864322111000 00000000 0
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
........+.+++.+||..||.+|||++|+++
T Consensus 237 ---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 237 ---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred ---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00122345778999999999999999999976
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=307.47 Aligned_cols=249 Identities=20% Similarity=0.222 Sum_probs=188.7
Q ss_pred hhhhccCCCCCceEEEeCC-----------------CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEE
Q 002186 695 ECEEAARPQSAAGCKAVLP-----------------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFC 755 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-----------------~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~ 755 (955)
..+.||+|+||.||+|... .+..||+|.+.... ...+.+.+|++++++++||||++++++|
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 88 (296)
T cd05051 9 FVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVC 88 (296)
T ss_pred ccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 7789999999999998753 23568999987543 2356788999999999999999999999
Q ss_pred EcCCeeEEEEeecCCCChhHHhhc-------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC
Q 002186 756 YNRHQAYLLYDYLPNGNLSEKIRT-------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822 (955)
Q Consensus 756 ~~~~~~~lv~ey~~~gsL~~~l~~-------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~ 822 (955)
..++..++||||+++++|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.
T Consensus 89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Nili~~ 165 (296)
T cd05051 89 TVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNCLVGK 165 (296)
T ss_pred ecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---CccccccchhceeecC
Confidence 999999999999999999999865 357888899999999999999998 9999999999999999
Q ss_pred CCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh--CCCCCCCCCCCCCccc
Q 002186 823 NMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT--NGRLTNAGSSLQNKPI 896 (955)
Q Consensus 823 ~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt--g~~p~~~~~~~~~~~~ 896 (955)
++.+|++|||+++........ .......|++||+.....++.++|||||||++|||++ |..|+...... ...
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~--~~~ 243 (296)
T cd05051 166 NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ--QVI 243 (296)
T ss_pred CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH--HHH
Confidence 999999999998654322111 1112234778898877788999999999999999998 55555422111 110
Q ss_pred cccccccccc-cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 897 DGLLGEMYNE-NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 897 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
. ........ ......+.......++.+++.+|++.||++|||+.|+++.|+.
T Consensus 244 ~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 244 E-NAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred H-HHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 0 00011000 0000001111223568899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=306.80 Aligned_cols=243 Identities=19% Similarity=0.203 Sum_probs=188.5
Q ss_pred hhhhccCCCCCceEEEeCC------CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
..+.+|+|+||.||+|... +++.||||+++.... ..+.+.+|++++++++|||||++++++.+.+..++++|
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e 88 (283)
T cd05091 9 FMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFS 88 (283)
T ss_pred HHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEE
Confidence 6788999999999999853 357899999975432 24568889999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceE
Q 002186 767 YLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828 (955)
Q Consensus 767 y~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki 828 (955)
|+++++|.+++.. ..++.....++.|+++||+|+|+. +|+||||||+||++++++.+|+
T Consensus 89 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~kl 165 (283)
T cd05091 89 YCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLNVKI 165 (283)
T ss_pred cCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCceEe
Confidence 9999999999842 256777889999999999999998 9999999999999999999999
Q ss_pred CcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccc
Q 002186 829 AEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 903 (955)
Q Consensus 829 ~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 903 (955)
+|||+++........ .......|.+||......++.++|||||||++|||+| |..|+.+... . .....+
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~-----~~~~~i 239 (283)
T cd05091 166 SDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-Q-----DVIEMI 239 (283)
T ss_pred cccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-H-----HHHHHH
Confidence 999998754322111 1112334778888877778999999999999999998 6666543221 1 111111
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 904 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
.+.... +...+....+.+++..||+.+|++||+++||+..|+.
T Consensus 240 ~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 240 RNRQVL---PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HcCCcC---CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111101 1112233557789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=304.06 Aligned_cols=243 Identities=20% Similarity=0.210 Sum_probs=178.4
Q ss_pred hccCCCCCceEEEeCC---CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 698 EAARPQSAAGCKAVLP---TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~~---~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
.||+|+||.||+|... ++..+|+|+++... .....+.+|+..+++++|||||+++|++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 5899999999999853 45679999987533 234467889999999999999999999999899999999999999
Q ss_pred hhHHhhc-------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 773 LSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 773 L~~~l~~-------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
|.++++. ..++.....++.|+++|++|||+. +++||||||+||+++.++.+|++|||+++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 9999964 235666778999999999999998 9999999999999999999999999998643222110
Q ss_pred --CcccccccCchhhhhcc-------CCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 844 --FPAKIAWTESGEFYNAM-------KEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 844 --~~~~~~~~~~~e~~~~~-------~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
...+...|.+||+.... .++.++|||||||++|||++ |+.||........... ........ ...+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~--~~~~~~~~--~~~~~ 234 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTY--TVREQQLK--LPKPR 234 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHH--HhhcccCC--CCCCc
Confidence 01122336678876532 35788999999999999996 8888864322111000 00000000 00000
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
........+.+++..|| .+|++|||++||++.|+
T Consensus 235 ~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 235 LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00112234567788898 68999999999999875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=301.30 Aligned_cols=241 Identities=20% Similarity=0.235 Sum_probs=188.7
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEE-cCCeeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCY-NRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~-~~~~~~lv~ey~~~gsL 773 (955)
..+.+|+|+||.||+|... |..||+|.++... ..+.+.+|+..+++++|+||++++|++. .++..++||||+++|+|
T Consensus 10 ~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L 87 (256)
T cd05082 10 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 87 (256)
T ss_pred eeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcH
Confidence 6788999999999999864 7889999986433 3456888999999999999999999865 45678999999999999
Q ss_pred hHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccccc
Q 002186 774 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 849 (955)
Q Consensus 774 ~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~ 849 (955)
.++++. ..++.....++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++.......... ...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~-~~~ 163 (256)
T cd05082 88 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPV 163 (256)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccCCCCc-cce
Confidence 999875 257888899999999999999998 999999999999999999999999999875433222111 223
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
.|.+||+.....++.++|||||||++|||+| |+.|+..... ... ...+.....+. ........+.+++.+
T Consensus 164 ~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~-~~~--~~~~~~~~~~~------~~~~~~~~~~~li~~ 234 (256)
T cd05082 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KDV--VPRVEKGYKMD------APDGCPPVVYDVMKQ 234 (256)
T ss_pred eecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH-HHH--HHHHhcCCCCC------CCCCCCHHHHHHHHH
Confidence 4788898888888999999999999999998 7777653211 100 00000000100 111223567789999
Q ss_pred ccCCCCCCCCCHHHHHHHhhcc
Q 002186 929 CTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
|++.+|++|||++++++.|+.+
T Consensus 235 ~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 235 CWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HhcCChhhCcCHHHHHHHHhcC
Confidence 9999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=322.18 Aligned_cols=242 Identities=16% Similarity=0.120 Sum_probs=191.1
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||+||+|... +|+.||||+++... .....+.+|+++++.++||||+++++++.+++..++||||++
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (350)
T cd05573 5 VIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMP 84 (350)
T ss_pred EEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCC
Confidence 6788999999999999964 79999999997532 234567889999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC------
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD------ 841 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~------ 841 (955)
+|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 161 (350)
T cd05573 85 GGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYL 161 (350)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccc
Confidence 9999999976 467788889999999999999998 99999999999999999999999999987543322
Q ss_pred -------------------------CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc
Q 002186 842 -------------------------GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 896 (955)
Q Consensus 842 -------------------------~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~ 896 (955)
.....++..|.+||+.....++.++|||||||++|||+||+.||.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~-- 239 (350)
T cd05573 162 NDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETY-- 239 (350)
T ss_pred cccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHH--
Confidence 11122455678999998888999999999999999999999998754321100
Q ss_pred cccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 002186 897 DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS-MEEALKL 946 (955)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt-~~ev~~~ 946 (955)
.. +.........+... .....+.+++.+|+. ||++||+ ++|++++
T Consensus 240 ~~-i~~~~~~~~~p~~~---~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 240 NK-IINWKESLRFPPDP---PVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HH-HhccCCcccCCCCC---CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 00 00000000010011 123456788888997 9999999 9999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-34 Score=313.15 Aligned_cols=235 Identities=17% Similarity=0.151 Sum_probs=184.7
Q ss_pred hccCCCCCceEEEeCC-CCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 698 EAARPQSAAGCKAVLP-TGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
.||+|+||+||+|... +++.||||+++... ...+.+..|+++++.+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 5899999999999864 68899999997532 2244566788888777 6999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 847 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~ 847 (955)
+|.+++.+ ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (318)
T cd05570 82 DLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG 158 (318)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence 99998875 468888999999999999999998 999999999999999999999999999864222111 11124
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
...|.+||+..+..++.++|||||||++|||+||+.||....... ....+.... ...+. .....+.+++.
T Consensus 159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~------~~~~i~~~~-~~~~~---~~~~~~~~li~ 228 (318)
T cd05570 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE------LFQSILEDE-VRYPR---WLSKEAKSILK 228 (318)
T ss_pred CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH------HHHHHHcCC-CCCCC---cCCHHHHHHHH
Confidence 456788999988889999999999999999999999986432110 111111111 10011 12345778999
Q ss_pred HccCCCCCCCCCH-----HHHHH
Q 002186 928 LCTRSTPSDRPSM-----EEALK 945 (955)
Q Consensus 928 ~Cl~~dp~~RPt~-----~ev~~ 945 (955)
+||+.||++||++ .++++
T Consensus 229 ~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 229 SFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHccCCHHHcCCCCCCCHHHHhc
Confidence 9999999999999 77765
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=303.96 Aligned_cols=235 Identities=17% Similarity=0.230 Sum_probs=176.8
Q ss_pred hccCCCCCceEEEeCC-------------------------CCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeE
Q 002186 698 EAARPQSAAGCKAVLP-------------------------TGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRL 751 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~~-------------------------~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l 751 (955)
.||+|+||.||+|.+. ....||||.++.... ....+.+|++++++++|||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 5899999999998742 124589999865332 24567788999999999999999
Q ss_pred eEEEEcCCeeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC----
Q 002186 752 LGFCYNRHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---- 824 (955)
Q Consensus 752 ~g~~~~~~~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~---- 824 (955)
+|+|.+++..++||||+++|+|.++++. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCcccC
Confidence 9999999999999999999999999864 457888999999999999999998 999999999999997643
Q ss_pred ---CceECcccccccccccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHH-hCCCCCCCCCCCCCcccccc
Q 002186 825 ---EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEIL-TNGRLTNAGSSLQNKPIDGL 899 (955)
Q Consensus 825 ---~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Ell-tg~~p~~~~~~~~~~~~~~~ 899 (955)
.+|++|||++........ ...... |.+||.... ..++.++|||||||++|||+ +|+.|+........
T Consensus 159 ~~~~~kl~d~g~~~~~~~~~~-~~~~~~-~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~------ 230 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSREE-RVERIP-WIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK------ 230 (274)
T ss_pred ccceeeecCCccccccccccc-cccCCc-ccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH------
Confidence 379999998754322111 112233 566776644 56788999999999999995 67777753321110
Q ss_pred ccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 900 LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
......... ... .....+.+++.+||+.+|++||||+||++.|+
T Consensus 231 -~~~~~~~~~-~~~---~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 231 -ERFYEKKHR-LPE---PSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred -HHHHHhccC-CCC---CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 011111100 011 11235778999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=316.07 Aligned_cols=255 Identities=21% Similarity=0.241 Sum_probs=191.5
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCC--
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-- 759 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-- 759 (955)
.+.++|. ..+.||+|+||.||+|.. .+|+.||||++... ......+.+|+.++++++||||+++++++...+
T Consensus 18 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 95 (359)
T cd07876 18 TVLKRYQ--QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSL 95 (359)
T ss_pred hhhhceE--EEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCc
Confidence 3456676 788999999999999985 57999999999643 223456778999999999999999999986543
Q ss_pred ----eeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 760 ----QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 760 ----~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
..|+||||++ +++.+.++...++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 96 EEFQDVYLVMELMD-ANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred cccceeEEEEeCCC-cCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 5799999997 468787877788888889999999999999999 99999999999999999999999999986
Q ss_pred cccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc----------------c
Q 002186 836 LTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------------G 898 (955)
Q Consensus 836 ~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~----------------~ 898 (955)
........ ...++..|.+||...+..++.++||||+||++|||+||+.||........+... .
T Consensus 172 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
T cd07876 172 TACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQP 251 (359)
T ss_pred ccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 54322111 112445578899988888999999999999999999999999744321110000 0
Q ss_pred ccccccccccc---------------CC-CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 899 LLGEMYNENEV---------------GS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 899 ~~~~~~~~~~~---------------~~-~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.........+. +. ..........+.+++.+|++.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 252 TVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000000 00 00000113457789999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-34 Score=319.23 Aligned_cols=246 Identities=13% Similarity=0.085 Sum_probs=186.7
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|+. .+|+.||+|.++... ...+.+.+|+++++.++|||||++++++.+++..|+|
T Consensus 44 ~y~--~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 44 DYD--VVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HCe--EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 355 778899999999999995 478899999996522 2344578899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 765 YDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
||||++|+|.+++.. ..+......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 122 ~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~ 198 (370)
T cd05621 122 MEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 198 (370)
T ss_pred EcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecccCCce
Confidence 999999999999976 457777888999999999999998 999999999999999999999999999876532211
Q ss_pred --CCcccccccCchhhhhcc----CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 843 --SFPAKIAWTESGEFYNAM----KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 843 --~~~~~~~~~~~~e~~~~~----~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
....++..|.+||..... .++.++||||+||++|||+||+.||....... ....+.+.......+...
T Consensus 199 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~------~~~~i~~~~~~~~~p~~~ 272 (370)
T cd05621 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG------TYSKIMDHKNSLNFPEDV 272 (370)
T ss_pred ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCcccCCCCcc
Confidence 122355668889987653 36788999999999999999999997433211 111111110000001111
Q ss_pred HHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSD--RPSMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~--RPt~~ev~~~ 946 (955)
.....+.+++..|+..++.+ ||+++|++++
T Consensus 273 ~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 273 EISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred cCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 12344556777788755543 8999999875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=308.71 Aligned_cols=248 Identities=17% Similarity=0.189 Sum_probs=188.8
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||++.. .+|..||+|.++.... ..+.+.+|++++.+++|||||+++++|.+++..++||||+++|
T Consensus 5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~ 84 (308)
T cd06615 5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 84 (308)
T ss_pred EEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCC
Confidence 678899999999999984 5788999999865322 2456788999999999999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 849 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~ 849 (955)
+|.++++. ..++.....++.|+++||+|||+.+ +++||||||+||+++.++.+|++|||++............+..
T Consensus 85 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 162 (308)
T cd06615 85 SLDQVLKKAGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 162 (308)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCc
Confidence 99999975 4577788899999999999999732 8999999999999999999999999998654322222222344
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccc-ccc---------------------------
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG-LLG--------------------------- 901 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~-~~~--------------------------- 901 (955)
.+.+||...+..++.++|||||||++|||+||+.|+............. ...
T Consensus 163 ~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (308)
T cd06615 163 SYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFEL 242 (308)
T ss_pred CccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHH
Confidence 5778898877778899999999999999999999986332110000000 000
Q ss_pred --ccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 902 --EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 902 --~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
......+.. .+ .......+.+++.+|++.||++|||++|+++.
T Consensus 243 ~~~~~~~~~~~-~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 243 LDYIVNEPPPK-LP-SGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred HHHHhcCCCcc-Cc-CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000 00 00123457899999999999999999999875
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=301.05 Aligned_cols=242 Identities=18% Similarity=0.247 Sum_probs=187.7
Q ss_pred hhccCCCCCceEEEeC--CC--CcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 697 EEAARPQSAAGCKAVL--PT--GITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~--~~--g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
++||+|+||.||+|+. .+ +..||+|.+..... ..+.+.+|++.+++++|||||++++++.. +..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence 3689999999999974 22 37899999976543 45678889999999999999999998864 567999999999
Q ss_pred CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCcc--
Q 002186 771 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA-- 846 (955)
Q Consensus 771 gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~-- 846 (955)
|+|.+++.. ..++..+..++.|++.|++|||.. +|+||||||+||+++.++.+|++|||+++...........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 80 GPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 999999975 467888999999999999999988 9999999999999999999999999998755332221111
Q ss_pred ---cccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 847 ---KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 847 ---~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
....|.+||......++.++|||||||++|||+| |+.|+....... . ...+... ... +........+
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~--~-~~~~~~~---~~~---~~~~~~~~~l 227 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE--V-IAMLESG---ERL---PRPEECPQEI 227 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH--H-HHHHHcC---CcC---CCCCCCCHHH
Confidence 1123677888887788999999999999999998 888775332110 0 0000000 000 1111223567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+++.+||..+|++||++.|+.+.|+++.
T Consensus 228 ~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 228 YSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 78999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=305.75 Aligned_cols=250 Identities=18% Similarity=0.259 Sum_probs=190.6
Q ss_pred hhhhccCCCCCceEEEe-----CCCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-----~~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 765 (955)
..+.||+|+||.||.+. ..++..||+|.++... ...+.+.+|++++++++||||+++.+++... ...++||
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (284)
T cd05079 8 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 87 (284)
T ss_pred hceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEE
Confidence 77889999999999987 3468899999987432 2345788999999999999999999999875 5689999
Q ss_pred eecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 766 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
||+++|+|.+++.+ ..+|.++..++.|++.||+|+|+. +|+||||||+||+++.++.+|++|||+++.......
T Consensus 88 e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~ 164 (284)
T cd05079 88 EFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 164 (284)
T ss_pred EccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccccccCcc
Confidence 99999999999864 368999999999999999999998 999999999999999999999999999875433221
Q ss_pred C-----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc---------ccccccccccccc
Q 002186 843 S-----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP---------IDGLLGEMYNENE 908 (955)
Q Consensus 843 ~-----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~---------~~~~~~~~~~~~~ 908 (955)
. ...+...|.+||+.....++.++|||||||++|||+|++.|........... .............
T Consensus 165 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd05079 165 YYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKR 244 (284)
T ss_pred ceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCcc
Confidence 1 1112233667888777778899999999999999999877643211100000 0000000000000
Q ss_pred cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 909 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
. +........+.+++.+|++.||++|||++|+++.|+.+
T Consensus 245 ~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 245 L---PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred C---CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1 11122345688999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=282.36 Aligned_cols=243 Identities=19% Similarity=0.212 Sum_probs=190.6
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeec---ccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEW---GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..++||+|.|+.||++. .++|+.+|+|.+.. .+...+.+.+|+++-..++|||||++..-+.+.+..|||+|+|.|
T Consensus 15 l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G 94 (355)
T KOG0033|consen 15 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 94 (355)
T ss_pred HHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccc
Confidence 77899999999999998 57999999998864 334567889999999999999999999999999999999999999
Q ss_pred CChhHHhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC---CCceECcccccccccccCC-CC
Q 002186 771 GNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYLTQLADG-SF 844 (955)
Q Consensus 771 gsL~~~l~~~~--~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~DfGl~~~~~~~~~-~~ 844 (955)
|+|..-|-.+. +....-.++.||.+||.|+|.+ +|||||+||+|+++.+. .-+|++|||+|........ ..
T Consensus 95 ~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G 171 (355)
T KOG0033|consen 95 GELFEDIVAREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHG 171 (355)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeCCcccccc
Confidence 99987664432 3444567899999999999999 99999999999999643 4589999999987652221 12
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..+++.+++||+....+++..+|||+-|||+|-++.|..||++...- ....+.....++- .++.++...++..+
T Consensus 172 ~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~--rlye~I~~g~yd~----~~~~w~~is~~Ak~ 245 (355)
T KOG0033|consen 172 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYEQIKAGAYDY----PSPEWDTVTPEAKS 245 (355)
T ss_pred ccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH--HHHHHHhccccCC----CCcccCcCCHHHHH
Confidence 33677889999999999999999999999999999999999863210 0111111111221 12233334455667
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 002186 925 VALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
++.+++..||++|-|+.|.+++
T Consensus 246 LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 246 LIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred HHHHHhccChhhhccHHHHhCC
Confidence 7888889999999999998753
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=322.12 Aligned_cols=242 Identities=13% Similarity=0.092 Sum_probs=186.2
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|+. .+|+.||||+++... .....+.+|+++++.++|||||++++++.+++..|+|||||+
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~ 84 (364)
T cd05599 5 SIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLP 84 (364)
T ss_pred EEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCC
Confidence 678899999999999995 579999999997532 224457789999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-----
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----- 842 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~----- 842 (955)
+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 161 (364)
T cd05599 85 GGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYR 161 (364)
T ss_pred CcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccccccccccc
Confidence 9999999875 457778889999999999999998 999999999999999999999999999864321100
Q ss_pred -----------------------------------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCC
Q 002186 843 -----------------------------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 887 (955)
Q Consensus 843 -----------------------------------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~ 887 (955)
....++..|++||+.....++.++|||||||++|||+||+.||..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~ 241 (364)
T cd05599 162 ILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCS 241 (364)
T ss_pred cccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCC
Confidence 011245668899998888899999999999999999999999874
Q ss_pred CCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 002186 888 GSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS---MEEALKL 946 (955)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt---~~ev~~~ 946 (955)
...... ..... ........+... .....+.+++.+|+. +|.+|++ ++|++++
T Consensus 242 ~~~~~~--~~~i~-~~~~~~~~~~~~---~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 242 DNPQET--YRKII-NWKETLQFPDEV---PLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCHHHH--HHHHH-cCCCccCCCCCC---CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 332110 00000 000000000000 112345667777875 9999998 8888763
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=306.39 Aligned_cols=252 Identities=20% Similarity=0.287 Sum_probs=193.4
Q ss_pred hhhhccCCCCCceEEEeC-----CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEc--CCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-----~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ 765 (955)
..+.+|+|+||.||+|+. .+++.||||.++.... ..+.+.+|++.+++++||||+++++++.. ....++||
T Consensus 8 ~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 87 (284)
T cd05038 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIM 87 (284)
T ss_pred hheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEE
Confidence 667899999999999984 3578999999976544 36678999999999999999999999987 55789999
Q ss_pred eecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 766 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
||+++|+|.+++.. ..++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||++........
T Consensus 88 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 164 (284)
T cd05038 88 EYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKD 164 (284)
T ss_pred ecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccccccCCc
Confidence 99999999999975 368899999999999999999998 999999999999999999999999999876542211
Q ss_pred CC-----cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc-c-------cccccccccccccc
Q 002186 843 SF-----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK-P-------IDGLLGEMYNENEV 909 (955)
Q Consensus 843 ~~-----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~-~-------~~~~~~~~~~~~~~ 909 (955)
.. ......+.+||......++.++|||||||++|||+||+.|+......... . ......+.......
T Consensus 165 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd05038 165 YYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGER 244 (284)
T ss_pred ceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCc
Confidence 11 11122355677777778889999999999999999999987643211100 0 00000011111100
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+.......++.+++.+||+.+|++||||.||+++|+.++
T Consensus 245 --~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 245 --LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred --CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 0111122356889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=316.57 Aligned_cols=254 Identities=20% Similarity=0.220 Sum_probs=191.5
Q ss_pred HhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcC----
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR---- 758 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~---- 758 (955)
+.++|. ..+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 15 VLKRYQ--NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhcee--EEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence 445676 778899999999999985 478999999997532 2345677899999999999999999988643
Q ss_pred --CeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 759 --HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 759 --~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
...++||||++ +++.+.+....++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~~~~~~lv~e~~~-~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 93 EFQDVYLVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_pred ccceeEEEhhhhc-ccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCccccc
Confidence 35799999996 578888887888999999999999999999998 999999999999999999999999999875
Q ss_pred ccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc----------------cc
Q 002186 837 TQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------------GL 899 (955)
Q Consensus 837 ~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~----------------~~ 899 (955)
....... ...++..|.+||+..+..++.++|||||||++|||+||+.||........+... ..
T Consensus 169 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (355)
T cd07874 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248 (355)
T ss_pred CCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHH
Confidence 4332211 122455688899988888999999999999999999999998743311100000 00
Q ss_pred ccccccccc---------------cC-CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 900 LGEMYNENE---------------VG-SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 900 ~~~~~~~~~---------------~~-~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
........+ .. ...........+.+++.+|++.||++|||++|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000000 00 000001123457799999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=317.69 Aligned_cols=191 Identities=13% Similarity=0.120 Sum_probs=163.8
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||+||+|.. .+|+.||||+++... .....+.+|++++.+++|||||++++++.+.+..|+|||||+
T Consensus 5 ~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~ 84 (363)
T cd05628 5 SLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLP 84 (363)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCC
Confidence 678899999999999984 579999999997532 123467789999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-----
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----- 842 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~----- 842 (955)
+|+|.+++.+ ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 85 gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~ 161 (363)
T cd05628 85 GGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYR 161 (363)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccc
Confidence 9999999975 467888889999999999999998 999999999999999999999999999864321100
Q ss_pred --------------------------------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCC
Q 002186 843 --------------------------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 888 (955)
Q Consensus 843 --------------------------------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~ 888 (955)
....++..|.+||+..+..++.++|||||||++|||+||+.||...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~ 239 (363)
T cd05628 162 NLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (363)
T ss_pred cccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence 0112456688999988888999999999999999999999999743
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=314.12 Aligned_cols=236 Identities=18% Similarity=0.174 Sum_probs=189.7
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ...++|+|.||+|+.+.. .+++.+|||.++++. ...+....|.+++.-. +||.++.++.+++++++.|.
T Consensus 369 ~F~--~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 369 DFR--LLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ceE--EEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 366 778999999999999995 578999999998753 2355566666665544 69999999999999999999
Q ss_pred EEeecCCCChhHHhh-cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC-
Q 002186 764 LYDYLPNGNLSEKIR-TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD- 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~-~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~- 841 (955)
||||+.|||+..+++ +..+..+..-|+..|+.||.|||++ +||+||||-.|||||.+|.+||+|||+++.-....
T Consensus 447 vmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~ 523 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGD 523 (694)
T ss_pred EEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccCCCCC
Confidence 999999999877777 4668888888999999999999999 99999999999999999999999999998543222
Q ss_pred -CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 842 -GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 842 -~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
.++-++++.|.+||+.....|+..+|.|||||+||||++|..||.+++.. +....++...+ ..+.....
T Consensus 524 ~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe------e~FdsI~~d~~----~yP~~ls~ 593 (694)
T KOG0694|consen 524 RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE------EVFDSIVNDEV----RYPRFLSK 593 (694)
T ss_pred ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHhcCCC----CCCCcccH
Confidence 22234778899999999999999999999999999999999999854421 12222222221 11123345
Q ss_pred HHHHHHHHccCCCCCCCCCH
Q 002186 921 LVLDVALLCTRSTPSDRPSM 940 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~ 940 (955)
+.+.++.+.+..+|++|-.+
T Consensus 594 ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 594 EAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHHHHHhccCcccccCC
Confidence 67788888999999999866
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=315.76 Aligned_cols=231 Identities=16% Similarity=0.098 Sum_probs=178.3
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHH-HHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFI-TRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~-~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
.||+|+||+||+|.. .+|+.||||++..... ..+.+.+|. .+++.++|||||++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 589999999999996 4799999999975321 223333443 4567899999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 847 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~ 847 (955)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (323)
T cd05575 82 ELFFHLQRERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG 158 (323)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence 99998875 456777888999999999999998 999999999999999999999999999864322111 11224
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
+..|.+||+.....++.++|||||||++|||+||+.||...... .....+.... ....+ .....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~------~~~~~i~~~~-~~~~~---~~~~~~~~li~ 228 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA------EMYDNILNKP-LRLKP---NISVSARHLLE 228 (323)
T ss_pred ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH------HHHHHHHcCC-CCCCC---CCCHHHHHHHH
Confidence 55678899988888999999999999999999999998643211 1111111111 11111 12345778889
Q ss_pred HccCCCCCCCCCHH
Q 002186 928 LCTRSTPSDRPSME 941 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ 941 (955)
+|++.||++||++.
T Consensus 229 ~~l~~~p~~R~~~~ 242 (323)
T cd05575 229 GLLQKDRTKRLGAK 242 (323)
T ss_pred HHhhcCHHhCCCCC
Confidence 99999999999984
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=305.04 Aligned_cols=245 Identities=17% Similarity=0.192 Sum_probs=188.9
Q ss_pred hcccchhhhccCCCCCceEEEeCC------CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.|. ..+.||+|++|.||+|... ++..||+|.+.... .....+.+|+..+++++||||+++++++.+.+..
T Consensus 7 ~~~--~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 7 SIT--LLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HcE--eeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 355 6788999999999999864 46789999886432 2345688899999999999999999999998999
Q ss_pred EEEEeecCCCChhHHhhc---------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC---CceEC
Q 002186 762 YLLYDYLPNGNLSEKIRT---------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EPHLA 829 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~---------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~---~~ki~ 829 (955)
++||||+++|+|.++++. ..+|.++.+++.|+++|++|||+. +++||||||+||+++.++ .+|++
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEec
Confidence 999999999999999865 257888999999999999999998 999999999999998654 58999
Q ss_pred cccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccc
Q 002186 830 EFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 830 DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
|||+++........ .......|.+||+..+..++.++|||||||++|||+| |..||...... . ......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-~-----~~~~~~ 235 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-E-----VMEFVT 235 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-H-----HHHHHH
Confidence 99998754221110 1111234678898888889999999999999999997 77777633211 0 000000
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
...... ........+.+++.+|++.+|++||+++||++.|+
T Consensus 236 ~~~~~~---~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 236 GGGRLD---PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred cCCcCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 000000 01122346778999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=300.38 Aligned_cols=235 Identities=18% Similarity=0.228 Sum_probs=180.8
Q ss_pred hhccCCCCCceEEEeCCC-C----------cEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 697 EEAARPQSAAGCKAVLPT-G----------ITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~-g----------~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
+.||+|+||.||+|...+ + ..||+|.++........+.+|++++++++||||++++|+|.. +..++||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 368999999999999753 3 257888876544436778899999999999999999999988 7789999
Q ss_pred eecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-------CceECcccccc
Q 002186 766 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-------EPHLAEFGFKY 835 (955)
Q Consensus 766 ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~-------~~ki~DfGl~~ 835 (955)
||+++|+|.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+|++|||++.
T Consensus 80 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~ 156 (259)
T cd05037 80 EYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156 (259)
T ss_pred EcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence 99999999999975 467888899999999999999988 999999999999999887 79999999987
Q ss_pred cccccCCCCcccccccCchhhhhcc--CCcccccchhHHHHHHHHHhC-CCCCCCCCCCCCccccccccccccccccCCC
Q 002186 836 LTQLADGSFPAKIAWTESGEFYNAM--KEEMYMDVYGFGEIILEILTN-GRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~DV~S~Gvvl~Elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
...... .......|.+||+.... .++.++|||||||++|||++| ..|+.... ...+.. ... .....+..
T Consensus 157 ~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~-~~~~~~--~~~---~~~~~~~~ 228 (259)
T cd05037 157 TVLSRE--ERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS-SSEKER--FYQ---DQHRLPMP 228 (259)
T ss_pred cccccc--ccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC-chhHHH--HHh---cCCCCCCC
Confidence 543311 11122236778887665 788899999999999999996 44443221 111000 000 11101111
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
. ...+.+++.+||..+|.+|||+.||++.|+
T Consensus 229 ~-----~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 229 D-----CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred C-----chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1 156789999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=308.15 Aligned_cols=248 Identities=17% Similarity=0.200 Sum_probs=192.8
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCe
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~ 760 (955)
.|. ..+.||+|+||.||+|.. .++..||||+++... ...+.+.+|+++++++ +||||++++++|...+.
T Consensus 36 ~~~--~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 36 NLS--FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HeE--EcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 455 778999999999999863 246689999987543 2345688999999999 79999999999999999
Q ss_pred eEEEEeecCCCChhHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
.++||||+++|+|.++++.. .++.+...++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++.
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccccc
Confidence 99999999999999999752 68999999999999999999998 999999999999999999999999999875
Q ss_pred ccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCC
Q 002186 837 TQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 911 (955)
Q Consensus 837 ~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (955)
....... .......|.+||......++.++||||+||++|||+| |+.|+....... ............
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~------~~~~~~~~~~~~- 263 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS------KFYKLIKEGYRM- 263 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH------HHHHHHHcCCcC-
Confidence 4322111 0112234778898877788999999999999999998 888875322110 000111111000
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
........++.+++.+|++.+|++|||+.|+++.|+++
T Consensus 264 -~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 264 -AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00111234678899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=298.85 Aligned_cols=240 Identities=15% Similarity=0.175 Sum_probs=191.6
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|+|++|.||+|+. .+|+.||+|.+... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd08529 4 ILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAEN 83 (256)
T ss_pred EeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCC
Confidence 567899999999999985 47899999998643 23456788899999999999999999999999999999999999
Q ss_pred CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--C
Q 002186 771 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--F 844 (955)
Q Consensus 771 gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~ 844 (955)
++|.++++. ..++.+...++.|+++|+.|||+. +|+||||||+||+++.++.+|++|||+++........ .
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 160 (256)
T cd08529 84 GDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT 160 (256)
T ss_pred CcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence 999999865 356788889999999999999988 9999999999999999999999999998755432211 1
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..+..+|.+||+.....++.++|||||||++|||+||+.|+..... .... ....... . .+........+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~----~~~~~~~-~--~~~~~~~~~~~~~ 231 (256)
T cd08529 161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--GALI----LKIIRGV-F--PPVSQMYSQQLAQ 231 (256)
T ss_pred cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HHHH----HHHHcCC-C--CCCccccCHHHHH
Confidence 1234567889998888889999999999999999999999864331 1000 1111110 0 0111123356788
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 002186 925 VALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
++.+||+.+|++||+|.|+++.
T Consensus 232 ~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 232 LIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHHHHccCCcccCcCHHHHhhC
Confidence 9999999999999999999864
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=308.24 Aligned_cols=247 Identities=22% Similarity=0.248 Sum_probs=191.1
Q ss_pred cccchhhhccCCCCCceEEEeCC------CCcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCee
Q 002186 691 FNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 761 (955)
|. ..+.||+|+||.||+|... +...||+|.+.... .....+.+|++++.++ +||||++++++|..++..
T Consensus 14 ~~--~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 91 (293)
T cd05053 14 LT--LGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL 91 (293)
T ss_pred eE--EeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence 55 6788999999999999853 34689999987532 2345678899999999 899999999999999999
Q ss_pred EEEEeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC
Q 002186 762 YLLYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 823 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~ 823 (955)
++||||+++|+|.++++. .+++.....++.|++.|++|||+. +|+||||||+||+++.+
T Consensus 92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~~ 168 (293)
T cd05053 92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTED 168 (293)
T ss_pred EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcCC
Confidence 999999999999999853 357888899999999999999988 99999999999999999
Q ss_pred CCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccc
Q 002186 824 MEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDG 898 (955)
Q Consensus 824 ~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~ 898 (955)
+.+|++|||+++........ .......|.+||+.....++.++|||||||++|||++ |..|+.......
T Consensus 169 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------ 242 (293)
T cd05053 169 HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE------ 242 (293)
T ss_pred CeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH------
Confidence 99999999998754332111 1111233678898888888999999999999999998 777765322100
Q ss_pred cccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 899 LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
......... . .+........+.+++.+||+.||++||||+|+++.|+++.
T Consensus 243 ~~~~~~~~~-~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 LFKLLKEGY-R--MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHHcCC-c--CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 000000000 0 0011122346779999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=311.92 Aligned_cols=237 Identities=15% Similarity=0.106 Sum_probs=181.5
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+.++.++ +||||+++++++.+.+..|+||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 689999999999985 578899999997532 2244577888888887 6999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 847 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~ 847 (955)
+|.+++.. ..++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (327)
T cd05617 82 DLMFHMQRQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG 158 (327)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence 99998864 578888999999999999999998 999999999999999999999999999864321111 11224
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
+..|.+||+..+..++.++|||||||++|||+||+.||................+.....+...+. .....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~li~ 235 (327)
T cd05617 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPR---FLSVKASHVLK 235 (327)
T ss_pred CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCC---CCCHHHHHHHH
Confidence 556889999988889999999999999999999999996322111100000011111111111111 12245678889
Q ss_pred HccCCCCCCCCCH
Q 002186 928 LCTRSTPSDRPSM 940 (955)
Q Consensus 928 ~Cl~~dp~~RPt~ 940 (955)
+|++.||++||++
T Consensus 236 ~~L~~dP~~R~~~ 248 (327)
T cd05617 236 GFLNKDPKERLGC 248 (327)
T ss_pred HHhccCHHHcCCC
Confidence 9999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=305.66 Aligned_cols=256 Identities=17% Similarity=0.232 Sum_probs=199.1
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeE
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 762 (955)
.+..+.|. ..+.||+|++|.||+|.. .+|+.||+|.+..... ..+.+.+|+.++++++||||+++++++...+..+
T Consensus 15 ~~~~~~y~--~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~ 92 (297)
T cd06656 15 GDPKKKYT--RFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 92 (297)
T ss_pred CChhhhce--eeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEE
Confidence 34445566 778899999999999994 6899999999975433 3556788999999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 763 LLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
+||||+++|+|.+++.+ ..++.++..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 93 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 93 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred EeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 99999999999999875 568888899999999999999998 99999999999999999999999999986543222
Q ss_pred CC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 GS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
.. ...+...|.+||......++.++|||||||++|||+||+.||............ .....+. ........
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~ 242 (297)
T cd06656 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-----ATNGTPE--LQNPERLS 242 (297)
T ss_pred cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee-----ccCCCCC--CCCccccC
Confidence 11 122445577889888878889999999999999999999998644322111000 0000000 01112223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH--HhhccCC
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALK--LLSGLKP 952 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~--~L~~~~~ 952 (955)
..+.+++.+||+.||++||+++|+++ -++..++
T Consensus 243 ~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 243 AVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 45678889999999999999999986 3444433
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=304.25 Aligned_cols=243 Identities=16% Similarity=0.196 Sum_probs=188.7
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
...++|+|+||.||++.. .++..||+|.++... ...+.+.+|++.+++++||||+++++++.+.+..++||||
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (280)
T cd05092 9 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEY 88 (280)
T ss_pred eccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEec
Confidence 667899999999999963 356789999987533 3356788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECc
Q 002186 768 LPNGNLSEKIRT-----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830 (955)
Q Consensus 768 ~~~gsL~~~l~~-----------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~D 830 (955)
+++|+|.++++. .+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~kL~d 165 (280)
T cd05092 89 MRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVVKIGD 165 (280)
T ss_pred CCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCEEECC
Confidence 999999999864 257888899999999999999998 999999999999999999999999
Q ss_pred ccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccccc
Q 002186 831 FGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 831 fGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
||+++....... ........|.+||+.....++.++|||||||++|||+| |+.|+....... .......
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~ 239 (280)
T cd05092 166 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE------AIECITQ 239 (280)
T ss_pred CCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH------HHHHHHc
Confidence 999864422111 01111234678898888888999999999999999999 777765322110 0111111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
....... ......+.+++.+||+.||.+||+++||.+.|+.
T Consensus 240 ~~~~~~~---~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 240 GRELERP---RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred CccCCCC---CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1101001 1123456789999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=302.30 Aligned_cols=244 Identities=20% Similarity=0.272 Sum_probs=190.9
Q ss_pred hhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.+|+|+||.||+|... ++..||+|.++... ...+.+.+|+..+++++||||+++++++.+++..++||||+
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (267)
T cd05066 8 IEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYM 87 (267)
T ss_pred eeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcC
Confidence 6788999999999999852 33479999987532 23457888999999999999999999999999999999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCc
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP 845 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~ 845 (955)
++|+|.+++.. ..++.+...++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++..........
T Consensus 88 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd05066 88 ENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY 164 (267)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccccccceee
Confidence 99999999975 358888999999999999999998 999999999999999999999999999876533221110
Q ss_pred ---c--cccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 846 ---A--KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 846 ---~--~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....+.+||+.....++.++|||||||++||+++ |+.|+....... ....+.+... .+.. ....
T Consensus 165 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~~~~~~~~---~~~~---~~~~ 235 (267)
T cd05066 165 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIKAIEEGYR---LPAP---MDCP 235 (267)
T ss_pred ecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHHHHhCCCc---CCCC---CCCC
Confidence 0 1123677888888888999999999999999887 888876432110 0000111110 1101 1223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
..+.+++.+|++.+|.+||+|+++++.|+++
T Consensus 236 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 236 AALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 4567899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=306.00 Aligned_cols=251 Identities=21% Similarity=0.205 Sum_probs=186.6
Q ss_pred cccchhhhccCCCCCceEEEeC-----------------CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeE
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-----------------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRL 751 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-----------------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l 751 (955)
|+ ..+.||+|+||.||++.. .++..||||+++... ...+.+.+|++.+++++||||+++
T Consensus 7 ~~--~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 7 LT--FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred ce--eeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 55 678899999999998752 234579999987532 234678899999999999999999
Q ss_pred eEEEEcCCeeEEEEeecCCCChhHHhhcC-------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCe
Q 002186 752 LGFCYNRHQAYLLYDYLPNGNLSEKIRTK-------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 818 (955)
Q Consensus 752 ~g~~~~~~~~~lv~ey~~~gsL~~~l~~~-------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~Ni 818 (955)
++++...+..++||||+++|+|.+++... .++.+...++.|++.|++|||+. +|+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence 99999999999999999999999998652 35677889999999999999998 999999999999
Q ss_pred eeCCCCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh--CCCCCCCCCCCC
Q 002186 819 VFDENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT--NGRLTNAGSSLQ 892 (955)
Q Consensus 819 Ll~~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt--g~~p~~~~~~~~ 892 (955)
+++.++.+|++|||+++........ .......+.+||......++.++|||||||++|||+| |..|+.......
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 9999999999999998754322110 1111223566777666778999999999999999998 556664322111
Q ss_pred Cccccccccccccccc-cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 893 NKPIDGLLGEMYNENE-VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 893 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
.. . ...+...... ....+........+.+++.+||+.||++||+|+||.+.|++
T Consensus 242 -~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 242 -VI-E-NTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred -HH-H-HHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 00 0 0000000000 00000011123567799999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=299.20 Aligned_cols=236 Identities=17% Similarity=0.215 Sum_probs=177.7
Q ss_pred hhccCCCCCceEEEeCCC-------------CcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeE
Q 002186 697 EEAARPQSAAGCKAVLPT-------------GITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~-------------g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 762 (955)
+.||+|+||.||+|+..+ ...||+|.+..... ....+.+|+..++.++|||||+++|+|..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 358999999999998532 23588998765332 2456788899999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC-------ceECccc
Q 002186 763 LLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-------PHLAEFG 832 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~-------~ki~DfG 832 (955)
+||||+++|+|..+++. ..++..+..++.|+++|++|||+. +|+||||||+||+++.++. +|++|||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 99999999999998864 468888999999999999999998 9999999999999987654 8999999
Q ss_pred ccccccccCCCCcccccccCchhhhh-ccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccC
Q 002186 833 FKYLTQLADGSFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 833 l~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
++........ ..+...|.+||... ...++.++|||||||++|||++ |..|+..... ... ..........
T Consensus 158 ~~~~~~~~~~--~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~------~~~~~~~~~~ 228 (262)
T cd05077 158 IPITVLSRQE--CVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-AEK------ERFYEGQCML 228 (262)
T ss_pred CCccccCccc--ccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch-hHH------HHHHhcCccC
Confidence 8865432211 11223366778765 4568889999999999999985 6655542211 100 0001110000
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
..+ ....+.+++.+||+.||++||+++|+++.++
T Consensus 229 ~~~----~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 229 VTP----SCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred CCC----ChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 011 1245678999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=303.35 Aligned_cols=240 Identities=17% Similarity=0.207 Sum_probs=190.7
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|.. .+|..||+|.++... ...+.+.+|++.+++++||||+++++++..++..++||||+++|
T Consensus 8 ~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (277)
T cd06642 8 KLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGG 87 (277)
T ss_pred HHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCC
Confidence 778899999999999985 468899999987432 23557889999999999999999999999999999999999999
Q ss_pred ChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Ccccc
Q 002186 772 NLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKI 848 (955)
Q Consensus 772 sL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~~~ 848 (955)
+|.+++.. ..++.....++.|+++|++|||+. +|+|+||||+||+++.++.+|++|||++......... ...+.
T Consensus 88 ~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 164 (277)
T cd06642 88 SALDLLKPGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGT 164 (277)
T ss_pred cHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCc
Confidence 99999875 457888889999999999999998 9999999999999999999999999998654322111 11234
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..|.+||+..+..++.++|||||||++|||+||+.|+........ .. ...... . ..........+.+++.+
T Consensus 165 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~---~~---~~~~~~-~--~~~~~~~~~~~~~li~~ 235 (277)
T cd06642 165 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV---LF---LIPKNS-P--PTLEGQYSKPFKEFVEA 235 (277)
T ss_pred ccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH---Hh---hhhcCC-C--CCCCcccCHHHHHHHHH
Confidence 457788988888889999999999999999999998763321110 00 000000 0 00111234567789999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 002186 929 CTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~ 946 (955)
||+.+|++||+|.|++++
T Consensus 236 ~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 236 CLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HccCCcccCcCHHHHHHh
Confidence 999999999999999974
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=303.73 Aligned_cols=245 Identities=18% Similarity=0.232 Sum_probs=188.8
Q ss_pred hhhhccCCCCCceEEEe-CCCCc----EEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGI----TVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~----~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||+||+|+ .++|. .||||.++... ...+.+.+|+.++++++||||++++|+|... ..+++|||
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l~~~~ 89 (279)
T cd05109 11 KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQLVTQL 89 (279)
T ss_pred eeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEEEEEc
Confidence 77889999999999998 45565 48999986532 2355678899999999999999999999764 57899999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
+++|+|.++++. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 90 ~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~ 166 (279)
T cd05109 90 MPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEY 166 (279)
T ss_pred CCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeeccccccee
Confidence 999999999975 358888999999999999999998 99999999999999999999999999987654322111
Q ss_pred ----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 845 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 845 ----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
......|.+||......++.++|||||||++|||+| |..|+...... .....+..... . +......
T Consensus 167 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~~~~~~---~---~~~~~~~ 237 (279)
T cd05109 167 HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR---EIPDLLEKGER---L---PQPPICT 237 (279)
T ss_pred ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHHCCCc---C---CCCccCC
Confidence 111234678888877788999999999999999999 77776532110 00011111000 0 0011233
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
..+.+++.+||+.||++||++.|+++.|+.+..
T Consensus 238 ~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 238 IDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 467789999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=332.57 Aligned_cols=246 Identities=16% Similarity=0.157 Sum_probs=190.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..++||||++
T Consensus 6 Ii~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~e 85 (932)
T PRK13184 6 IIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIE 85 (932)
T ss_pred EEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCC
Confidence 778899999999999985 479999999997532 224568899999999999999999999999999999999999
Q ss_pred CCChhHHhhc-------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 770 NGNLSEKIRT-------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 770 ~gsL~~~l~~-------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
+|+|.+++.. ..++....+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 86 GGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGLAk~ 162 (932)
T PRK13184 86 GYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGAAIF 162 (932)
T ss_pred CCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecCccee
Confidence 9999998863 234566788999999999999998 999999999999999999999999999875
Q ss_pred ccccCC--------------------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc
Q 002186 837 TQLADG--------------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 896 (955)
Q Consensus 837 ~~~~~~--------------------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~ 896 (955)
...... ....++..|++||...+..++.++|||||||++|||+||+.||....... ...
T Consensus 163 i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k-i~~ 241 (932)
T PRK13184 163 KKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK-ISY 241 (932)
T ss_pred cccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh-hhh
Confidence 421100 01124566889999888889999999999999999999999986422111 000
Q ss_pred cccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhhcc
Q 002186 897 DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP-SMEEALKLLSGL 950 (955)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RP-t~~ev~~~L~~~ 950 (955)
. .....+.... ...+....+.+++.+|++.||++|| +++++.+.|+..
T Consensus 242 ~---~~i~~P~~~~---p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 242 R---DVILSPIEVA---PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred h---hhccChhhcc---ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0 0111111010 0112234567888999999999996 566677777654
|
|
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=299.98 Aligned_cols=242 Identities=18% Similarity=0.276 Sum_probs=191.5
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.+|+|+||.||+|...++..+|+|.++......+.+.+|++++++++|+||+++++++.+ ...++||||+++|+|.
T Consensus 10 ~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~ 88 (260)
T cd05073 10 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLL 88 (260)
T ss_pred EEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHH
Confidence 778899999999999998888889999987655556678899999999999999999999887 7789999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---ccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 847 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~~~ 847 (955)
+++.. ..++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+.......... ...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 165 (260)
T cd05073 89 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 165 (260)
T ss_pred HHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcc
Confidence 99975 357888899999999999999988 99999999999999999999999999986543221111 111
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||+.....++.++|||||||++||++| |+.|+....... .......... . +........+.+++
T Consensus 166 ~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~~~~~~~---~---~~~~~~~~~~~~~i 236 (260)
T cd05073 166 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---VIRALERGYR---M---PRPENCPEELYNIM 236 (260)
T ss_pred cccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHhCCCC---C---CCcccCCHHHHHHH
Confidence 233678898887788999999999999999999 777775322110 0000000000 0 11112334677899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhc
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
.+|++.+|++||++.++.+.|+.
T Consensus 237 ~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 237 MRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHcccCcccCcCHHHHHHHHhc
Confidence 99999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=303.95 Aligned_cols=249 Identities=19% Similarity=0.193 Sum_probs=192.4
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||+||+|.. .+|+.||+|++.... ...+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 9 ~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 88 (284)
T cd06620 9 TISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCG 88 (284)
T ss_pred HHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCC
Confidence 788999999999999985 578999999886532 23567889999999999999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 849 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~ 849 (955)
+|.++++. ..++.....++.+++.|+.|||+.+ +|+||||||+||+++.++.++|+|||++............+..
T Consensus 89 ~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~ 166 (284)
T cd06620 89 SLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTS 166 (284)
T ss_pred CHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCc
Confidence 99999876 4578888999999999999999732 7999999999999999999999999987643222222222344
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc--c---ccccccccccccccCCCCchHHHHHHHHH
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK--P---IDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
.+.+||+.....++.++|||||||++|||+||+.||......... . .......+....... . ...+....+.+
T Consensus 167 ~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 244 (284)
T cd06620 167 TYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPR-L-PSSDFPEDLRD 244 (284)
T ss_pred ccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCC-C-CchhcCHHHHH
Confidence 577889887778889999999999999999999998743221000 0 001111111111010 0 01123456788
Q ss_pred HHHHccCCCCCCCCCHHHHHHHh
Q 002186 925 VALLCTRSTPSDRPSMEEALKLL 947 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~ev~~~L 947 (955)
++.+|++.||++|||++|++++.
T Consensus 245 li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 245 FVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHHHHhcCCcccCcCHHHHhcCc
Confidence 99999999999999999999863
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=314.39 Aligned_cols=243 Identities=15% Similarity=0.067 Sum_probs=185.6
Q ss_pred hhhhccCCCCCceEEEeC----CCCcEEEEEEeeccc-----chHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEE
Q 002186 695 ECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~-----~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv 764 (955)
..+.||+|+||+||++.. .+|+.||+|+++... ...+.+.+|++++.+++ ||||+++++++..++..++|
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (332)
T cd05614 4 LLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLI 83 (332)
T ss_pred EEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEE
Confidence 678899999999999874 478999999997532 12445778899999995 99999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~ 160 (332)
T cd05614 84 LDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK 160 (332)
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence 999999999999865 467888889999999999999998 999999999999999999999999999875432211
Q ss_pred C---CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 843 S---FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 843 ~---~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
. ...++..|++||+..+. .++.++|||||||++|||+||+.||........ .......+.... ..... ..
T Consensus 161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~~~~~~~~~~~~-~~~~~---~~ 234 (332)
T cd05614 161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT--QSEVSRRILKCD-PPFPS---FI 234 (332)
T ss_pred CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC--HHHHHHHHhcCC-CCCCC---CC
Confidence 1 12245567888987654 478889999999999999999999863221110 000001111111 00111 12
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
...+.+++.+|++.||++|| +++|++++
T Consensus 235 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 235 GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 34567888999999999999 77788753
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=301.93 Aligned_cols=243 Identities=19% Similarity=0.232 Sum_probs=175.8
Q ss_pred hccCCCCCceEEEeCCC---CcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 698 EAARPQSAAGCKAVLPT---GITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~~~---g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
.||+|+||+||+|...+ ...+|+|.+..... ....+.+|++.++.++||||++++|+|.+.+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 45688888764322 24567889999999999999999999999999999999999999
Q ss_pred hhHHhhcC-------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC----
Q 002186 773 LSEKIRTK-------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---- 841 (955)
Q Consensus 773 L~~~l~~~-------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~---- 841 (955)
|.+++... .++.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 99999652 24666788999999999999998 99999999999999999999999999986432211
Q ss_pred CCCcccccccCchhhhhc-------cCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 842 GSFPAKIAWTESGEFYNA-------MKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~~-------~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
.........|.+||+... ..++.++|||||||++|||++ |..|+....... ...........+ ...+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~~~~~~~~--~~~~~ 234 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ--VLKQVVREQDIK--LPKPQ 234 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH--HHHHHhhccCcc--CCCCc
Confidence 011112233677887642 356778999999999999999 555654322110 000000110000 00011
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
........+.+++..|| .||++|||++||++.|.
T Consensus 235 ~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 235 LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11122344556777888 59999999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=306.74 Aligned_cols=241 Identities=23% Similarity=0.291 Sum_probs=189.0
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-ch---HHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TR---IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
-|. ....||.|+||.||-|.. .+.++||||++.-.. .. =..+.+||+.|.+++|||+|.+.|||..+...|||
T Consensus 27 lf~--dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLV 104 (948)
T KOG0577|consen 27 LFS--DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLV 104 (948)
T ss_pred HHH--HHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHH
Confidence 366 788999999999999994 578899999997532 22 34567899999999999999999999999999999
Q ss_pred EeecCCCChhHHh---hcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 765 YDYLPNGNLSEKI---RTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 765 ~ey~~~gsL~~~l---~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||- ||-.|.+ ++.+..-+...|+.|+..||+|||++ +.||||||+.|||+.+.+.+|++|||-|.+.....
T Consensus 105 MEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn 180 (948)
T KOG0577|consen 105 MEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN 180 (948)
T ss_pred HHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCchh
Confidence 99996 4555554 55677778889999999999999999 99999999999999999999999999987655433
Q ss_pred CCCcccccccCchhhhhc---cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 842 GSFPAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~~---~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
. + .+++|+++||++-. ..|+-|+||||+||.+.|+.-+++|.+.-. .+...+.-.-++.|.-..+.+.+
T Consensus 181 s-F-vGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN-----AMSALYHIAQNesPtLqs~eWS~- 252 (948)
T KOG0577|consen 181 S-F-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNESPTLQSNEWSD- 252 (948)
T ss_pred c-c-cCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch-----HHHHHHHHHhcCCCCCCCchhHH-
Confidence 2 2 36788889998755 468999999999999999999998876321 11111111112222222344444
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+..++-.|+++-|.+|||.++++++
T Consensus 253 --~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 253 --YFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred --HHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 45566678999999999999999874
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=311.46 Aligned_cols=239 Identities=21% Similarity=0.252 Sum_probs=189.7
Q ss_pred hhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 696 CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
.-++|+|.||+||.|+. .+...+|||-+.... ...+-..+||.+-++++|+|||+++|.|.++++.-|.||-+|||||
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 34689999999999995 466679999997543 3456678999999999999999999999999999999999999999
Q ss_pred hHHhhcC---C--CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-CCCCceECcccccccccccC---CCC
Q 002186 774 SEKIRTK---R--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLAD---GSF 844 (955)
Q Consensus 774 ~~~l~~~---~--~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~DfGl~~~~~~~~---~~~ 844 (955)
.+.|+.+ + ...+.-.+.+||.+||.|||.. .|||||||-.|||++ -.|.+||+|||-++....-. ..+
T Consensus 660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETF 736 (1226)
T KOG4279|consen 660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETF 736 (1226)
T ss_pred HHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCcccccc
Confidence 9999862 2 4556677899999999999999 999999999999997 56899999999887554322 222
Q ss_pred cccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 845 PAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
+ ++..|++||++.. ..|+.++|||||||.+.||.||++||.+-...+..... -.++.. .++.+.+...++
T Consensus 737 T-GTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFk---VGmyKv----HP~iPeelsaea 808 (1226)
T KOG4279|consen 737 T-GTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFK---VGMYKV----HPPIPEELSAEA 808 (1226)
T ss_pred c-cchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhh---hcceec----CCCCcHHHHHHH
Confidence 3 3444778888764 35888899999999999999999999854333221111 112211 133345667788
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..++++|..+||.+||++++++.
T Consensus 809 k~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 809 KNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHcCCCcccCccHHHhcc
Confidence 89999999999999999999875
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=307.69 Aligned_cols=247 Identities=17% Similarity=0.153 Sum_probs=203.3
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc----hHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT----RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~ 762 (955)
..|. ..+++|+|.||.||+++.. +|+.+|+|.+.+... ..+.+.+|+++|+++. |||||.+.+++++++.++
T Consensus 35 ~~Y~--l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 35 EKYE--LGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccEE--ehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3455 6689999999999999965 699999999976433 2467899999999999 999999999999999999
Q ss_pred EEEeecCCCChhHHhhcC-CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC----CCceECcccccccc
Q 002186 763 LLYDYLPNGNLSEKIRTK-RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN----MEPHLAEFGFKYLT 837 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~~-~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~----~~~ki~DfGl~~~~ 837 (955)
+|||+|.||.|.+.|... .+......++.|++.|+.|+|+. +|+|||+||+|+|+... +.+|++|||++...
T Consensus 113 lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~ 189 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI 189 (382)
T ss_pred EEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence 999999999999999887 77777889999999999999998 99999999999999643 47999999999877
Q ss_pred cccC-CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 838 QLAD-GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 838 ~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
.... .....++++|.+||+.....++..+||||.||++|.|++|.+||.+...... ...+.........+.++
T Consensus 190 ~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~------~~~i~~~~~~f~~~~w~ 263 (382)
T KOG0032|consen 190 KPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI------FLAILRGDFDFTSEPWD 263 (382)
T ss_pred cCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH------HHHHHcCCCCCCCCCcc
Confidence 6522 2234478889999999989999999999999999999999999986543211 11111111111233445
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.....+.+++..++..||.+|+|+.+++++
T Consensus 264 ~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 264 DISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 556677888999999999999999999985
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=341.02 Aligned_cols=443 Identities=27% Similarity=0.328 Sum_probs=291.0
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
..++.|+++.|.+-...-+.+.+.-+|+.||+|+|.++ ..|..+..+..|+.|+++.|.+. .+|.+.+++.+|++|+|
T Consensus 21 ~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL 98 (1081)
T KOG0618|consen 21 EALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNL 98 (1081)
T ss_pred HHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhhee
Confidence 45888889888776332233345556999999999876 78888899999999999999887 67888899999999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~ 260 (955)
.+|.+. ..|.++..+++|++|++++|.+. .+|.-+..++.+..+..++|.... .++.+. ++.+++..|.+.+.
T Consensus 99 ~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~----~lg~~~-ik~~~l~~n~l~~~ 171 (1081)
T KOG0618|consen 99 KNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQ----RLGQTS-IKKLDLRLNVLGGS 171 (1081)
T ss_pred ccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhh----hhcccc-chhhhhhhhhcccc
Confidence 988887 68889999999999999999884 788888888888888888883221 222333 77888888888888
Q ss_pred CCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCC
Q 002186 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (955)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 340 (955)
++.++.+++. .|+|.+|.+. . ..+..+.+|+.|....|+++... -.-++|+.|+.++|.++...+.. .-
T Consensus 172 ~~~~i~~l~~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~~p--~p 240 (1081)
T KOG0618|consen 172 FLIDIYNLTH--QLDLRYNEME-V--LDLSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDVHP--VP 240 (1081)
T ss_pred hhcchhhhhe--eeecccchhh-h--hhhhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeecccc--cc
Confidence 8888877776 7888888876 2 34667778888888888876431 23467778888888777333221 12
Q ss_pred CCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEEC
Q 002186 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRL 420 (955)
Q Consensus 341 ~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~L 420 (955)
.+|+++++++|++++ +|++++.+.+|+.++..+|+++ .+|..++...+|+.+....|.+.. +|+....+++|++|+|
T Consensus 241 ~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~y-ip~~le~~~sL~tLdL 317 (1081)
T KOG0618|consen 241 LNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELEY-IPPFLEGLKSLRTLDL 317 (1081)
T ss_pred ccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhh-CCCcccccceeeeeee
Confidence 467788888888774 5577777788888888877774 566666666666666666665552 3444455555555555
Q ss_pred cCCccccccchhccCCCC-CCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccC
Q 002186 421 EDNSFSGEIPLKFSQLPD-INYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNIT 499 (955)
Q Consensus 421 s~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~ 499 (955)
..|+|....+..|.-+.. |..|+.+.|.+... | ...-..++.|+.|.+.+|.++
T Consensus 318 ~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~l-p------------------------~~~e~~~~~Lq~LylanN~Lt 372 (1081)
T KOG0618|consen 318 QSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTL-P------------------------SYEENNHAALQELYLANNHLT 372 (1081)
T ss_pred hhccccccchHHHhhhhHHHHHHhhhhcccccc-c------------------------cccchhhHHHHHHHHhcCccc
Confidence 555554322222222222 34444444444321 1 111123445566666666665
Q ss_pred C-CCCCCCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcC
Q 002186 500 G-NLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFG 578 (955)
Q Consensus 500 ~-~~p~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 578 (955)
. .+|.+..+..|++|++++|++.......+.++..|++|+||+|+|+ .+|+.+.+++.|++|...+|++.. .| .+.
T Consensus 373 d~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~-fP-e~~ 449 (1081)
T KOG0618|consen 373 DSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLS-FP-ELA 449 (1081)
T ss_pred ccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceee-ch-hhh
Confidence 4 3455556666666666666665322234556666666666666665 455666666666666666666653 23 555
Q ss_pred CCCCCcEEECCCCcce
Q 002186 579 SCSSLTVLNVSFNDIS 594 (955)
Q Consensus 579 ~l~~L~~L~ls~N~l~ 594 (955)
.+++|+.+|+|.|+++
T Consensus 450 ~l~qL~~lDlS~N~L~ 465 (1081)
T KOG0618|consen 450 QLPQLKVLDLSCNNLS 465 (1081)
T ss_pred hcCcceEEecccchhh
Confidence 5566666666666654
|
|
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=299.17 Aligned_cols=242 Identities=21% Similarity=0.281 Sum_probs=191.2
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.+|+|+||.||+|...++..+|||.++........+.+|++++++++||||+++++++......++||||+++|+|.
T Consensus 8 ~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 87 (256)
T cd05112 8 LVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLS 87 (256)
T ss_pred EEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHH
Confidence 56789999999999999877889999998765555667889999999999999999999999999999999999999999
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCc---ccc
Q 002186 775 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP---AKI 848 (955)
Q Consensus 775 ~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~---~~~ 848 (955)
++++. ..++.....++.|++.|++|||+. +++||||||+||+++.++.+||+|||++........... ...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 164 (256)
T cd05112 88 DYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFP 164 (256)
T ss_pred HHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccc
Confidence 99865 357888899999999999999998 999999999999999999999999999865432211111 112
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
..+.+||...+..++.++|||||||++|||++ |+.|+....... .. ....+..... . +. ....++.+++.
T Consensus 165 ~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~-~~~~~~~~~~-~--~~---~~~~~~~~l~~ 235 (256)
T cd05112 165 VKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE--VV-ETINAGFRLY-K--PR---LASQSVYELMQ 235 (256)
T ss_pred hhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH--HH-HHHhCCCCCC-C--CC---CCCHHHHHHHH
Confidence 24678888887788899999999999999998 777775322100 00 0000000000 0 01 12356888999
Q ss_pred HccCCCCCCCCCHHHHHHHhh
Q 002186 928 LCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
+||+.+|++|||++||+++|+
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 236 HCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHcccChhhCCCHHHHHHhhC
Confidence 999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=308.27 Aligned_cols=247 Identities=21% Similarity=0.262 Sum_probs=190.2
Q ss_pred hcccchhhhccCCCCCceEEEeC--------CCCcEEEEEEeecc--cchHHHHHHHHHHHhcc-CCCCceeEeEEEEcC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWG--ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR 758 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~--------~~g~~vAvK~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 758 (955)
.|. ..+.||+|+||.||+|.. .++..||+|.++.. ....+.+.+|++.++++ +||||+++++++...
T Consensus 16 ~~~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 16 KLT--LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred Hee--ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 355 778899999999999862 24568999998643 23356788999999999 899999999999999
Q ss_pred CeeEEEEeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 759 HQAYLLYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
+..++||||+++|+|.+++.. ..+|.++..++.|+++||+|||+. +|+||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEE
Confidence 999999999999999999864 246778889999999999999998 99999999999999
Q ss_pred CCCCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
+.++.+|++|||+++........ .......|.+||...+..++.++|||||||++|||+| |..|+.... ..
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~--- 246 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VE--- 246 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-HH---
Confidence 99999999999998754322111 1112233678888877788999999999999999999 666664221 11
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.....+...... .........+.+++.+||+.+|++||||.|+++.|+++
T Consensus 247 --~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~ 296 (304)
T cd05101 247 --ELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296 (304)
T ss_pred --HHHHHHHcCCcC---CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence 111111111000 01112345677899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=312.11 Aligned_cols=249 Identities=21% Similarity=0.224 Sum_probs=187.2
Q ss_pred cccchhhhccCCCCCceEEEe------CCCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcC-Ce
Q 002186 691 FNSTECEEAARPQSAAGCKAV------LPTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNR-HQ 760 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~------~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~-~~ 760 (955)
|. ..+.||+|+||+||+|. ..+++.||||+++.... ..+.+.+|++++.++ +|||||+++++|... ..
T Consensus 9 ~~--~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 9 LK--LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hc--ccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 55 77889999999999996 34688999999975332 345677899999999 689999999988754 46
Q ss_pred eEEEEeecCCCChhHHhhc-------------------------------------------------------------
Q 002186 761 AYLLYDYLPNGNLSEKIRT------------------------------------------------------------- 779 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~------------------------------------------------------------- 779 (955)
.++||||+++|+|.++++.
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 7899999999999998853
Q ss_pred --------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC----ccc
Q 002186 780 --------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF----PAK 847 (955)
Q Consensus 780 --------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~----~~~ 847 (955)
..+|.+...++.|+++|++|||+. +|+||||||+||+++.++.+|++|||+++......... ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 135667788999999999999998 99999999999999999999999999986542221111 111
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||......++.++|||||||++|||++ |..|+....... ..... .........+. ....++.+++
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~---~~~~~~~~~~~---~~~~~~~~~~ 315 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRR---LKEGTRMRAPD---YTTPEMYQTM 315 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH--HHHHH---HhccCCCCCCC---CCCHHHHHHH
Confidence 223667888877788999999999999999997 777765322110 00000 00000000011 1123577899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
..||+.||++|||+.|++++|+.+-+
T Consensus 316 ~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 316 LDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-34 Score=314.82 Aligned_cols=232 Identities=15% Similarity=0.093 Sum_probs=178.9
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHH-HHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFIT-RIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
.||+|+||+||+|.. .+|+.||||++.... .....+..|.. +++.++|||||++++++..++..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 589999999999984 579999999997532 12233444444 567899999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 847 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~ 847 (955)
+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (325)
T cd05604 82 ELFFHLQRERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG 158 (325)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccC
Confidence 99998865 457788889999999999999998 999999999999999999999999999864322111 11224
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
+..|.+||+.....++.++|||||||++|||+||+.||....... ......... ....+ .....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~------~~~~~~~~~-~~~~~---~~~~~~~~ll~ 228 (325)
T cd05604 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE------MYDNILHKP-LVLRP---GASLTAWSILE 228 (325)
T ss_pred ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH------HHHHHHcCC-ccCCC---CCCHHHHHHHH
Confidence 556788999888888999999999999999999999987432111 111111111 11111 12345668888
Q ss_pred HccCCCCCCCCCHHH
Q 002186 928 LCTRSTPSDRPSMEE 942 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~e 942 (955)
+|++.||.+||++.+
T Consensus 229 ~ll~~~p~~R~~~~~ 243 (325)
T cd05604 229 ELLEKDRQRRLGAKE 243 (325)
T ss_pred HHhccCHHhcCCCCC
Confidence 999999999998864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=312.77 Aligned_cols=233 Identities=16% Similarity=0.129 Sum_probs=182.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCC-CceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHK-NLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~-niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.||+|+||.||+|.. .+++.||||+++... ...+.+..|++++..++|+ +|+++++++.+.+..|+||||+
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~ 83 (324)
T cd05587 4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 83 (324)
T ss_pred EEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCC
Confidence 678899999999999985 468899999997532 2345567788889888765 5888999999999999999999
Q ss_pred CCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CC
Q 002186 769 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SF 844 (955)
Q Consensus 769 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~ 844 (955)
++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... ..
T Consensus 84 ~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (324)
T cd05587 84 NGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRT 160 (324)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceee
Confidence 99999999865 457888889999999999999998 999999999999999999999999999864321111 11
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..++..|.+||+..+..++.++||||+||++|||+||+.||...... .....+.... ...+. .....+.+
T Consensus 161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~------~~~~~i~~~~-~~~~~---~~~~~~~~ 230 (324)
T cd05587 161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED------ELFQSIMEHN-VSYPK---SLSKEAVS 230 (324)
T ss_pred ecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCC-CCCCC---CCCHHHHH
Confidence 22456688999998888899999999999999999999998643211 0111111111 10011 12345778
Q ss_pred HHHHccCCCCCCCCCH
Q 002186 925 VALLCTRSTPSDRPSM 940 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~ 940 (955)
++.+|+..||++||+.
T Consensus 231 li~~~l~~~P~~R~~~ 246 (324)
T cd05587 231 ICKGLLTKHPAKRLGC 246 (324)
T ss_pred HHHHHhhcCHHHcCCC
Confidence 8899999999999986
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=312.37 Aligned_cols=233 Identities=16% Similarity=0.128 Sum_probs=181.9
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.||+|+||.||+|.. .+++.||||.++.... ..+.+..|.+++... +||+|+++++++.+.+..++||||+
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~ 83 (323)
T cd05616 4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYV 83 (323)
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCC
Confidence 667899999999999985 4788999999975321 233455667777766 5899999999999999999999999
Q ss_pred CCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CC
Q 002186 769 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SF 844 (955)
Q Consensus 769 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~ 844 (955)
++|+|.+.+.. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....... ..
T Consensus 84 ~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~ 160 (323)
T cd05616 84 NGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKT 160 (323)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcccc
Confidence 99999999865 467888899999999999999998 999999999999999999999999999864322111 11
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..++..|.+||+.....++.++|||||||++|||+||+.||...... .....+.... ...+ .....++.+
T Consensus 161 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~------~~~~~i~~~~-~~~p---~~~s~~~~~ 230 (323)
T cd05616 161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHN-VAYP---KSMSKEAVA 230 (323)
T ss_pred CCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH------HHHHHHHhCC-CCCC---CcCCHHHHH
Confidence 22456688999998888999999999999999999999998743211 1111111111 1111 122345778
Q ss_pred HHHHccCCCCCCCCCH
Q 002186 925 VALLCTRSTPSDRPSM 940 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~ 940 (955)
++.+|++.||.+|++.
T Consensus 231 li~~~l~~~p~~R~~~ 246 (323)
T cd05616 231 ICKGLMTKHPGKRLGC 246 (323)
T ss_pred HHHHHcccCHHhcCCC
Confidence 9999999999999984
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=313.30 Aligned_cols=234 Identities=17% Similarity=0.120 Sum_probs=178.7
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHH-HHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIV-SEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~-~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
.||+|+||+||+|+. .+++.||+|++..... ....+ .++..+++.++|||||++++++.+.+..|+||||+++|
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 589999999999985 4788999999975321 12233 33344567899999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 847 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~ 847 (955)
+|.+++.. .........++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 158 (325)
T cd05602 82 ELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG 158 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence 99999975 345666677999999999999998 999999999999999999999999999864322211 11224
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
+..|.+||+..+..++.++||||+||++|||++|+.||....... ....+.... ....+ .....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~~~-~~~~~---~~~~~~~~li~ 228 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE------MYDNILNKP-LQLKP---NITNSARHLLE 228 (325)
T ss_pred CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH------HHHHHHhCC-cCCCC---CCCHHHHHHHH
Confidence 556889999888889999999999999999999999987432111 111111111 11111 22345678888
Q ss_pred HccCCCCCCCCCHHHHH
Q 002186 928 LCTRSTPSDRPSMEEAL 944 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~ 944 (955)
+|++.||.+||++.+.+
T Consensus 229 ~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 229 GLLQKDRTKRLGAKDDF 245 (325)
T ss_pred HHcccCHHHCCCCCCCH
Confidence 99999999999987543
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=301.85 Aligned_cols=244 Identities=19% Similarity=0.269 Sum_probs=190.5
Q ss_pred hhhhccCCCCCceEEEeCC-CC---cEEEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLP-TG---ITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g---~~vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.+|+|+||.||+|... +| ..||||.++.. ....+.+..|++.+++++||||+++++++.+.+..++||||+
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 87 (269)
T cd05065 8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFM 87 (269)
T ss_pred EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecC
Confidence 6778999999999999854 33 36999998753 223567889999999999999999999999999999999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 844 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~- 844 (955)
++|+|.++++. ..++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.........
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 164 (269)
T cd05065 88 ENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 164 (269)
T ss_pred CCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccccCccccc
Confidence 99999999865 357888999999999999999998 99999999999999999999999999986543221110
Q ss_pred ----ccc--ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 845 ----PAK--IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 845 ----~~~--~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
..+ ...+.+||+.....++.++|||||||++|||++ |+.|+....... ....+..... .+.. .+
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~---~~~~i~~~~~---~~~~---~~ 235 (269)
T cd05065 165 YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD---VINAIEQDYR---LPPP---MD 235 (269)
T ss_pred cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH---HHHHHHcCCc---CCCc---cc
Confidence 000 123678898888888999999999999999887 888876432110 0001111100 1111 12
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
....+.+++.+||+.+|++||++++|+..|+++
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 236 CPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 234567899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=299.48 Aligned_cols=246 Identities=20% Similarity=0.271 Sum_probs=195.7
Q ss_pred hcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
.|. ..+.||+|++|.||+|...+++.||||.++......+.+.+|++.+++++||||+++++++.+.+..++||||++
T Consensus 7 ~~~--i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 7 SLK--LERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hee--eeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 355 678899999999999998888899999998665666788999999999999999999999998889999999999
Q ss_pred CCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 770 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 770 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
+|+|.+++.. ..++.+...++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++........
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR 161 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhhhhh
Confidence 9999999975 357889999999999999999998 9999999999999999999999999998654321110
Q ss_pred -CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 844 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 844 -~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
.......|.+||...+..++.++||||+||++|||+| |+.|+...... .....+......... ......
T Consensus 162 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~ 232 (261)
T cd05034 162 EGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR------EVLEQVERGYRMPRP---PNCPEE 232 (261)
T ss_pred hccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCCCCC---CCCCHH
Confidence 0011223678888887788999999999999999999 88777532210 011111110000001 112346
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
+.+++.+|+..+|++||+++|+.+.|+.
T Consensus 233 ~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 233 LYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 7889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=304.45 Aligned_cols=243 Identities=22% Similarity=0.262 Sum_probs=188.8
Q ss_pred hhhhccCCCCCceEEEeCC------CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
....+|+|+||.||+|... ++..||+|.++... ...+.+.+|++.+++++||||++++++|...+..++|||
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 88 (288)
T cd05050 9 YVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFE 88 (288)
T ss_pred ecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEe
Confidence 7788999999999999853 57789999987543 235568889999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc------------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC
Q 002186 767 YLPNGNLSEKIRT------------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822 (955)
Q Consensus 767 y~~~gsL~~~l~~------------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~ 822 (955)
|+++|+|.+++.. .+++.++..++.|++.||+|||+. +++||||||+||+++.
T Consensus 89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~nil~~~ 165 (288)
T cd05050 89 YMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGE 165 (288)
T ss_pred cCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhheEecC
Confidence 9999999999963 245777889999999999999998 9999999999999999
Q ss_pred CCCceECcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccc
Q 002186 823 NMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPID 897 (955)
Q Consensus 823 ~~~~ki~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~ 897 (955)
++.+|++|||+++....... ........|.+||...+..++.++|||||||++|||++ |..|+..... .
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-~----- 239 (288)
T cd05050 166 NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-E----- 239 (288)
T ss_pred CCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-H-----
Confidence 99999999999864322111 01111123677888888889999999999999999998 7677653211 1
Q ss_pred ccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 898 GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
.......+..... .......++.+++.+|++.||++|||++|+++.|++
T Consensus 240 ~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 EVIYYVRDGNVLS---CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHHhcCCCCC---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 0111111111010 111233567889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=296.18 Aligned_cols=240 Identities=17% Similarity=0.221 Sum_probs=191.9
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
..+.+|+|+||.||+|+.. +++.||+|.++.... .+.+.+|++.+++++||||++++|++.+++..++||||+++++|
T Consensus 7 ~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L 85 (256)
T cd06612 7 ILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSV 85 (256)
T ss_pred hhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcH
Confidence 7788999999999999965 488999999875433 67888999999999999999999999999999999999999999
Q ss_pred hHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcccc
Q 002186 774 SEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 848 (955)
Q Consensus 774 ~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~ 848 (955)
.+++.. ..++.....++.|+++|++|||+. +|+|||++|+||+++.++.+|++|||++........ ....+.
T Consensus 86 ~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 162 (256)
T cd06612 86 SDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGT 162 (256)
T ss_pred HHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCC
Confidence 999864 458899999999999999999998 999999999999999999999999999875443221 111234
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..+.+||+..+..++.++|||||||++|||+||+.|+.......... ...... .............+.+++.+
T Consensus 163 ~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~i~~ 235 (256)
T cd06612 163 PFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF------MIPNKP-PPTLSDPEKWSPEFNDFVKK 235 (256)
T ss_pred ccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh------hhccCC-CCCCCchhhcCHHHHHHHHH
Confidence 45778898888888999999999999999999999986432211100 000000 00011112233567889999
Q ss_pred ccCCCCCCCCCHHHHHH
Q 002186 929 CTRSTPSDRPSMEEALK 945 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~ 945 (955)
||+.||++|||++||++
T Consensus 236 ~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 236 CLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHhcChhhCcCHHHHhc
Confidence 99999999999999986
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=304.03 Aligned_cols=246 Identities=17% Similarity=0.242 Sum_probs=191.6
Q ss_pred hhhhccCCCCCceEEEeCCC-----CcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEc-CCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVLPT-----GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~-----g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~e 766 (955)
..+.||+|+||.||+|.... +..||+|+++... ...+.+.+|++.+++++||||+++++++.. +...++++|
T Consensus 10 ~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 89 (280)
T cd05043 10 LSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYP 89 (280)
T ss_pred EeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEE
Confidence 67889999999999999654 7889999987532 235667889999999999999999999876 467899999
Q ss_pred ecCCCChhHHhhc----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 767 YLPNGNLSEKIRT----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 767 y~~~gsL~~~l~~----------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
|+++|+|.+++.. ..++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~g~~~~ 166 (280)
T cd05043 90 YMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDNALSRD 166 (280)
T ss_pred cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCCCCccc
Confidence 9999999999864 256888899999999999999998 999999999999999999999999999875
Q ss_pred ccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCC
Q 002186 837 TQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 911 (955)
Q Consensus 837 ~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (955)
....... ...+...|.+||+.....++.++|||||||++||++| |+.|+....... .......... ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~~~---~~~ 240 (280)
T cd05043 167 LFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---MAAYLKDGYR---LAQ 240 (280)
T ss_pred ccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH---HHHHHHcCCC---CCC
Confidence 4322111 1112233678888887788999999999999999999 888876432111 0000001110 100
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
. ......+.+++.+||..||++|||+.|+++.|+++..
T Consensus 241 ~---~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 241 P---INCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred C---CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1 1123457889999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=312.35 Aligned_cols=231 Identities=15% Similarity=0.091 Sum_probs=177.3
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHH-HHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFI-TRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~-~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
.||+|+||.||+|+. .+|+.||||.+..... ....+.+|+ .+++.++|||||++++++.+.+..|+||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 689999999999996 5789999999975321 223333444 4678899999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 847 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~ 847 (955)
+|.+.+.. .....+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05603 82 ELFFHLQRERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG 158 (321)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence 99988865 356677788999999999999998 999999999999999999999999999864322111 11224
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
+..|.+||......++.++|||||||++|||+||+.||...... .....+.... ...++ .....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~~~-~~~~~---~~~~~~~~li~ 228 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS------QMYDNILHKP-LQLPG---GKTVAACDLLV 228 (321)
T ss_pred CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH------HHHHHHhcCC-CCCCC---CCCHHHHHHHH
Confidence 55688899988888899999999999999999999998743211 0111111111 11111 12345678899
Q ss_pred HccCCCCCCCCCHH
Q 002186 928 LCTRSTPSDRPSME 941 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ 941 (955)
+|++.||++||++.
T Consensus 229 ~~l~~~p~~R~~~~ 242 (321)
T cd05603 229 GLLHKDQRRRLGAK 242 (321)
T ss_pred HHccCCHhhcCCCC
Confidence 99999999999754
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=319.60 Aligned_cols=242 Identities=13% Similarity=0.068 Sum_probs=183.4
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..|+||||++
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~ 84 (377)
T cd05629 5 TVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLP 84 (377)
T ss_pred EeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCC
Confidence 678899999999999984 589999999986532 124567889999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-----
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----- 842 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~----- 842 (955)
+|+|.+++.. ..+......++.|++.||+|||+. +|+||||||+|||++.++.+|++|||+++.......
T Consensus 85 gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 161 (377)
T cd05629 85 GGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQ 161 (377)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccccccccccc
Confidence 9999999865 456777778999999999999998 999999999999999999999999999853211000
Q ss_pred --------------------------------------------CCcccccccCchhhhhccCCcccccchhHHHHHHHH
Q 002186 843 --------------------------------------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEI 878 (955)
Q Consensus 843 --------------------------------------------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~El 878 (955)
....++..|.+||+.....++.++|||||||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 241 (377)
T cd05629 162 KLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFEC 241 (377)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhh
Confidence 001245568889998888899999999999999999
Q ss_pred HhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCC---CCCHHHHHHH
Q 002186 879 LTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSD---RPSMEEALKL 946 (955)
Q Consensus 879 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~---RPt~~ev~~~ 946 (955)
+||+.||........ ..... ........ +........+.+++.+|+. +|.+ ||++.|++++
T Consensus 242 ltG~~Pf~~~~~~~~--~~~i~-~~~~~~~~---p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 242 LIGWPPFCSENSHET--YRKII-NWRETLYF---PDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hcCCCCCCCCCHHHH--HHHHH-ccCCccCC---CCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 999999864332110 00000 00000001 0001122345677777886 6665 4699998864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=319.69 Aligned_cols=191 Identities=15% Similarity=0.138 Sum_probs=162.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++++++|||||++++++.+++..|+|||||+
T Consensus 5 ~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~ 84 (382)
T cd05625 5 KIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIP 84 (382)
T ss_pred EEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCC
Confidence 778899999999999985 578999999997532 224567889999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC------
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD------ 841 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~------ 841 (955)
+|+|.+++.+ ..+......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 85 gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~ 161 (382)
T cd05625 85 GGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161 (382)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence 9999999875 346666778899999999999998 99999999999999999999999999874221000
Q ss_pred -------------------------------------------CCCcccccccCchhhhhccCCcccccchhHHHHHHHH
Q 002186 842 -------------------------------------------GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEI 878 (955)
Q Consensus 842 -------------------------------------------~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~El 878 (955)
.....++..|.+||+.....++.++||||+||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~el 241 (382)
T cd05625 162 SGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 241 (382)
T ss_pred cccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHH
Confidence 0001245568899998888899999999999999999
Q ss_pred HhCCCCCCCC
Q 002186 879 LTNGRLTNAG 888 (955)
Q Consensus 879 ltg~~p~~~~ 888 (955)
+||+.||...
T Consensus 242 ltG~~Pf~~~ 251 (382)
T cd05625 242 LVGQPPFLAQ 251 (382)
T ss_pred HhCCCCCCCC
Confidence 9999999743
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=307.72 Aligned_cols=248 Identities=21% Similarity=0.260 Sum_probs=190.1
Q ss_pred hcccchhhhccCCCCCceEEEeC--------CCCcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR 758 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~--------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 758 (955)
.|. ..+.||+|+||.||+|.. .++..||+|.++... .....+.+|+++++++ +||||++++++|...
T Consensus 19 ~~~--i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 19 RLV--LGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred HeE--EeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 455 778899999999999873 134579999997532 2345677899999999 799999999999999
Q ss_pred CeeEEEEeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 759 HQAYLLYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
+..++||||+++|+|.+++.. .++|.++..++.|++.||+|||+. +++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEE
Confidence 999999999999999999964 257888999999999999999988 99999999999999
Q ss_pred CCCCCceECcccccccccccCC--CCcc--cccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADG--SFPA--KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~--~~~~--~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
+.++.+|++|||+++....... .... ....|.+||...+..++.++|||||||++|||+| |+.|+.. .....
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~-~~~~~-- 250 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEE-- 250 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCc-CCHHH--
Confidence 9999999999999865432111 0111 1124678888877788999999999999999999 6666642 21110
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
..... ..... .+.......++.+++.+||+.+|++||||+||++.|+.+.
T Consensus 251 ---~~~~~-~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 251 ---LFKLL-KEGHR--MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred ---HHHHH-HcCCC--CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 00000 00100 0111122356778899999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=298.91 Aligned_cols=242 Identities=17% Similarity=0.178 Sum_probs=185.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
....+|+|+||.||+|+. .++..||+|.+..... ..+.+.+|++++++++||||++++|++..++..++||||+++++
T Consensus 12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 91 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGS 91 (268)
T ss_pred ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCC
Confidence 556899999999999994 5788999999875433 45678899999999999999999999999999999999999999
Q ss_pred hhHHhhcC---C--CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-CCCceECcccccccccccCCC--C
Q 002186 773 LSEKIRTK---R--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADGS--F 844 (955)
Q Consensus 773 L~~~l~~~---~--~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-~~~~ki~DfGl~~~~~~~~~~--~ 844 (955)
|.++++.. . ++.....++.|+++|++|||+. +|+||||||+||+++. ++.+||+|||.+......... .
T Consensus 92 L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 168 (268)
T cd06624 92 LSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTET 168 (268)
T ss_pred HHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCcccc
Confidence 99999752 3 6677788999999999999998 9999999999999986 678999999998654322111 1
Q ss_pred cccccccCchhhhhcc--CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAM--KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~--~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
..+...|.+||+.... .++.++|||||||++|||++|+.|+............. ...... .........++
T Consensus 169 ~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~ 241 (268)
T cd06624 169 FTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV---GMFKIH----PEIPESLSAEA 241 (268)
T ss_pred CCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh---hhhccC----CCCCcccCHHH
Confidence 1233446778877543 37788999999999999999999986432211000000 000000 00111233457
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+++.+||+.+|++|||++|++++
T Consensus 242 ~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 242 KNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred HHHHHHHcCCCchhCCCHHHHHhC
Confidence 788999999999999999999863
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=296.89 Aligned_cols=240 Identities=18% Similarity=0.227 Sum_probs=191.9
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.+|.|+||.||+|+. .++..||||.++... ...+.+.+|++++++++||||+++++++.+++..++||||+++|
T Consensus 8 ~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (277)
T cd06640 8 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGG 87 (277)
T ss_pred hhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCC
Confidence 678899999999999985 468899999987532 33567888999999999999999999999999999999999999
Q ss_pred ChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Ccccc
Q 002186 772 NLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKI 848 (955)
Q Consensus 772 sL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~~~ 848 (955)
+|.+++.. ..++.+...++.|+++|++|+|+. +++|+||+|+||+++.++.++++|||++......... ...+.
T Consensus 88 ~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 164 (277)
T cd06640 88 SALDLLRAGPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGT 164 (277)
T ss_pred cHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCc
Confidence 99999875 457777888999999999999998 9999999999999999999999999998654332211 11234
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
.++.+||+..+...+.++|||||||++|||+||+.|+........ .... ... ............+.+++.+
T Consensus 165 ~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~------~~~~-~~~--~~~~~~~~~~~~~~~li~~ 235 (277)
T cd06640 165 PFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV------LFLI-PKN--NPPTLTGEFSKPFKEFIDA 235 (277)
T ss_pred ccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH------hhhh-hcC--CCCCCchhhhHHHHHHHHH
Confidence 457888988877889999999999999999999998864322110 0000 000 0011123445668899999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 002186 929 CTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~ 946 (955)
||+.+|++||+++|+++.
T Consensus 236 ~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 236 CLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HcccCcccCcCHHHHHhC
Confidence 999999999999999864
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=308.15 Aligned_cols=247 Identities=19% Similarity=0.219 Sum_probs=184.7
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|+.. +++.||||+++.... ....+.+|++++++++||||+++++++..++..++||||+++
T Consensus 10 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 88 (309)
T cd07872 10 KLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK- 88 (309)
T ss_pred EEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-
Confidence 7788999999999999854 788999999875322 234567899999999999999999999999999999999974
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Ccc
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 846 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~ 846 (955)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 165 (309)
T cd07872 89 DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEV 165 (309)
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcccccccc
Confidence 88888764 357788888999999999999998 9999999999999999999999999998654322211 122
Q ss_pred cccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------ccccccccccccccccC
Q 002186 847 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLGEMYNENEVG 910 (955)
Q Consensus 847 ~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~~~~~~~~~~ 910 (955)
+...|.+||...+ ..++.++||||+||++|||+||+.||........ |..........+.....
T Consensus 166 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (309)
T cd07872 166 VTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPK 245 (309)
T ss_pred ccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCc
Confidence 3455778887643 5678899999999999999999999864322100 00000000000000000
Q ss_pred CC-----CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 911 SS-----SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 911 ~~-----~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.. .........+.+++.+|++.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 246 YKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred cCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00 000112345678999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=326.56 Aligned_cols=244 Identities=15% Similarity=0.181 Sum_probs=189.4
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 759 (955)
++|. ..+.||+|+||+||+|. ..+|+.||||+++... .....+.+|+..+..++|+|||++++.+...+
T Consensus 32 ~rY~--i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 32 KKYW--ISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred CCEE--EEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 4565 78899999999999998 4689999999997532 23456778999999999999999988775432
Q ss_pred ---eeEEEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECc
Q 002186 760 ---QAYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830 (955)
Q Consensus 760 ---~~~lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~D 830 (955)
..++||||+++|+|.++++. ..++.....++.|++.||+|+|+. +|+||||||+|||++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEe
Confidence 36899999999999999864 346677788999999999999998 999999999999999999999999
Q ss_pred ccccccccccC----CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccc
Q 002186 831 FGFKYLTQLAD----GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 906 (955)
Q Consensus 831 fGl~~~~~~~~----~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 906 (955)
||+++...... .....++..|.+||+.....++.++|||||||++|||+||+.||..... . .........
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-~-----~~~~~~~~~ 260 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-E-----EVMHKTLAG 260 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-H-----HHHHHHhcC
Confidence 99987543221 1122355668899999888899999999999999999999999864321 1 011111111
Q ss_pred cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 907 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.....+ .....++.+++.+||+.||++||++.|++++
T Consensus 261 ~~~~~~---~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 261 RYDPLP---PSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCC---CCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 100011 1223457788999999999999999999864
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=306.18 Aligned_cols=248 Identities=17% Similarity=0.169 Sum_probs=183.2
Q ss_pred hhhhccCC--CCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARP--QSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g--~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..++||+| +|++||++.. ++|+.||||+++... ...+.+.+|+++++.++|||||+++++|..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35789999 6789999985 689999999997532 23456778999999999999999999999999999999999
Q ss_pred CCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--
Q 002186 769 PNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 842 (955)
Q Consensus 769 ~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-- 842 (955)
++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.++++|||..........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 99999999853 367888999999999999999998 999999999999999999999999986432211100
Q ss_pred -------CCcccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc--ccccccccccc------
Q 002186 843 -------SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK--PIDGLLGEMYN------ 905 (955)
Q Consensus 843 -------~~~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~--~~~~~~~~~~~------ 905 (955)
....+...|.+||+... ..++.++|||||||++|||+||+.||......... ..........+
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPA 238 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhh
Confidence 01112233677887765 45889999999999999999999998632110000 00000000000
Q ss_pred ------------------------ccccC----CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 906 ------------------------ENEVG----SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 906 ------------------------~~~~~----~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..+.. ..+........+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 239 EELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 00000 00001122346789999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=295.29 Aligned_cols=240 Identities=21% Similarity=0.275 Sum_probs=190.3
Q ss_pred hhccCCCCCceEEEeCCC----CcEEEEEEeecccch--HHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 697 EEAARPQSAAGCKAVLPT----GITVSVKKIEWGATR--IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~----g~~vAvK~~~~~~~~--~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
+.||+|+||.||+|+..+ +..||||.++..... .+.+.+|++.+.+++|+||+++++++.+.+..++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 368999999999999653 889999999764333 56788999999999999999999999999999999999999
Q ss_pred CChhHHhhcC-----------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 771 GNLSEKIRTK-----------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 771 gsL~~~l~~~-----------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
|+|.+++... .++.+...++.|+++|++|||+. +|+||||||+||+++.++.+|++|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999753 47888999999999999999998 999999999999999999999999999876543
Q ss_pred cC----CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCc
Q 002186 840 AD----GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 914 (955)
Q Consensus 840 ~~----~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (955)
.. .........|.+||......++.++||||+||++|||++ |..|+...... ............ ..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~---~~ 228 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE------EVLEYLRKGYRL---PK 228 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH------HHHHHHHcCCCC---CC
Confidence 22 111112334678888877788999999999999999999 47777643211 011111111101 11
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 915 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 915 ~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
......++.+++.+|+..+|++|||++|+++.|+
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 229 PEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1122456788999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=310.88 Aligned_cols=239 Identities=21% Similarity=0.274 Sum_probs=189.8
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeec---c--cchHHHHHHHHHHHhccCCCCceeEeEEEEcCC--eeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEW---G--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~---~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~e 766 (955)
..+++|+|+|-+||||... +|..||--.++. . ....+.|.+|+.+|+.++|||||+++.++.+.+ ..-+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 4578999999999999964 788888433322 2 223578999999999999999999999998755 4788999
Q ss_pred ecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-CCCceECcccccccccccCCC
Q 002186 767 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 767 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-~~~~ki~DfGl~~~~~~~~~~ 843 (955)
.|..|+|..++++ +.+....+.|++||.+||.|||++ .|||||||||..||++.. .|.+||+|.|+|.........
T Consensus 124 L~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ak 202 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAK 202 (632)
T ss_pred cccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccccc
Confidence 9999999999976 557777889999999999999986 789999999999999985 489999999999877655444
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch--HHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL--QDEIKL 921 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 921 (955)
...+++..++||.|+ ..|++.+||||||++|+||+|+..|+.+-.+.. ++|....-+..+.. .-...+
T Consensus 203 svIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A---------QIYKKV~SGiKP~sl~kV~dPe 272 (632)
T KOG0584|consen 203 SVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA---------QIYKKVTSGIKPAALSKVKDPE 272 (632)
T ss_pred eeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH---------HHHHHHHcCCCHHHhhccCCHH
Confidence 455888899999988 689999999999999999999999987433221 12211111111111 011245
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHH
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+.+++.+|+.. .++|||+.|+++
T Consensus 273 vr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 273 VREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHHHHHHhcC-chhccCHHHHhh
Confidence 77888999999 999999999986
|
|
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=298.70 Aligned_cols=246 Identities=16% Similarity=0.205 Sum_probs=190.5
Q ss_pred hcccchhhhccCCCCCceEEEeCC------CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
+|. ..+.||+|+||.||+|... ++..||+|.+.... .....+.+|++++++++||||++++|++...+..
T Consensus 7 ~~~--~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 7 KIT--LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred Hee--EEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 355 6788999999999999853 34789999986543 2345678899999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 762 YLLYDYLPNGNLSEKIRT------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
++||||+++|+|.+++.. ..+|.+...++.|++.|++|||+. +|+||||||+||+++.++.+|++
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 999999999999999864 246778889999999999999988 99999999999999999999999
Q ss_pred cccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccc
Q 002186 830 EFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 830 DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
|||+++....... ........|.+||......++.++|||||||++||++| |+.|+....... ......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------~~~~~~ 235 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE------VLKFVI 235 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH------HHHHHh
Confidence 9999875432211 11112234678888877788999999999999999999 777765322110 000111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
.......+. .....+.+++.+||+.+|++|||+.|+++.|++
T Consensus 236 ~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 236 DGGHLDLPE---NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred cCCCCCCCC---CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 111011111 124567899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=301.96 Aligned_cols=245 Identities=20% Similarity=0.274 Sum_probs=193.8
Q ss_pred hhhhccCCCCCceEEEeC--C-CCc--EEEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL--P-TGI--TVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~--~-~g~--~vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..++||+|.||.||+|+. + .|+ -||||.-+.+ ....+.|..|..+|+.++|||||+++|+|.+ ...+||||.
T Consensus 393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL 471 (974)
T KOG4257|consen 393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMEL 471 (974)
T ss_pred HHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEec
Confidence 557899999999999983 3 343 5888987653 3347789999999999999999999999976 467999999
Q ss_pred cCCCChhHHhhcCC---CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 768 LPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 768 ~~~gsL~~~l~~~~---~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
++-|.|..+|+... +...-..++.|+..||+|||+. .+|||||.++|||+...-.+|++|||+++......-.
T Consensus 472 ~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYk 548 (974)
T KOG4257|consen 472 APLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYK 548 (974)
T ss_pred ccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhccccchhh
Confidence 99999999998744 4455678999999999999999 9999999999999999999999999999876543311
Q ss_pred ---CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 844 ---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 844 ---~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
....+.| ++||-....+.+.++|||=|||.+||++. |.+||.+-.+. +.+..+-+.... +.++.++
T Consensus 549 aS~~kLPIKW-maPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs------DVI~~iEnGeRl---P~P~nCP 618 (974)
T KOG4257|consen 549 ASRGKLPIKW-MAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS------DVIGHIENGERL---PCPPNCP 618 (974)
T ss_pred ccccccceee-cCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc------ceEEEecCCCCC---CCCCCCC
Confidence 1124554 56688888899999999999999999976 77888643221 122222222212 2234556
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
..+..++.+||+.||.+||.+.|+...|..+.++
T Consensus 619 p~LYslmskcWayeP~kRPrftei~~~lsdv~qe 652 (974)
T KOG4257|consen 619 PALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQE 652 (974)
T ss_pred hHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence 6778999999999999999999999998877553
|
|
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=296.50 Aligned_cols=240 Identities=19% Similarity=0.242 Sum_probs=187.5
Q ss_pred hhccCCCCCceEEEeCC--CC--cEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 697 EEAARPQSAAGCKAVLP--TG--ITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~--~g--~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
+.||+|++|.||+|... .| ..||||.++.... ..+.+.+|++.+++++|||||++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 36899999999999853 33 3699999976544 35678899999999999999999999988 889999999999
Q ss_pred CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC---
Q 002186 771 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 843 (955)
Q Consensus 771 gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--- 843 (955)
|+|.+++.. ..+|.....++.|+++||+|||+. +++||||||+||+++.++.+|++|||+++........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 999999965 357888999999999999999998 9999999999999999999999999998765432211
Q ss_pred --CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 844 --FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 844 --~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
.......|.+||+.....++.++|||||||++|||+| |+.|+....... ... .... ...... .......
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~-~~~~--~~~~~~---~~~~~~~ 228 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILK-KIDK--EGERLE---RPEACPQ 228 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHH-HHHh--cCCcCC---CCccCCH
Confidence 1112234678898888889999999999999999999 888875322110 000 0000 000010 1112235
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
.+.+++.+|++.+|++||+++|+++.|.
T Consensus 229 ~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 229 DIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 6778999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-33 Score=294.90 Aligned_cols=241 Identities=20% Similarity=0.249 Sum_probs=188.5
Q ss_pred hhccCCCCCceEEEeCCCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 697 EEAARPQSAAGCKAVLPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
+.||+|++|.||+|...+|+.||+|.++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 36899999999999987799999999875432 3557889999999999999999999999999999999999999999
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC----Cccc
Q 002186 775 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----FPAK 847 (955)
Q Consensus 775 ~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~----~~~~ 847 (955)
+++.. ..++.....++.++++|++|||+. +++||||||+||+++.++.+|++|||+++........ ....
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 99964 357888899999999999999998 9999999999999999999999999998654321110 0111
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||...+..++.++|||||||++|||+| |..|+....... ......... . . .........+.+++
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~---~~~~~~~~~--~-~---~~~~~~~~~~~~li 228 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ---TRERIESGY--R-M---PAPQLCPEEIYRLM 228 (251)
T ss_pred eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH---HHHHHhcCC--C-C---CCCccCCHHHHHHH
Confidence 223677888877788999999999999999999 666664322100 000110000 0 0 11112335678899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhc
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
.+|+..+|++|||++|+++.|++
T Consensus 229 ~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 229 LQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred HHHhccChhhCcCHHHHHHHhhC
Confidence 99999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=315.45 Aligned_cols=254 Identities=20% Similarity=0.223 Sum_probs=191.6
Q ss_pred HhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcC----
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR---- 758 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~---- 758 (955)
+.++|. ..+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+.++++++||||+++++++...
T Consensus 22 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQ--NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhccee--EEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccc
Confidence 445676 788999999999999985 47899999999753 22345677899999999999999999987643
Q ss_pred --CeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 759 --HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 759 --~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
...|+||||++ ++|.+.+....++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 175 (364)
T cd07875 100 EFQDVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 175 (364)
T ss_pred ccCeEEEEEeCCC-CCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCccc
Confidence 35799999996 578888887888999999999999999999998 999999999999999999999999999875
Q ss_pred ccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-c---------------c
Q 002186 837 TQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-G---------------L 899 (955)
Q Consensus 837 ~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~---------------~ 899 (955)
....... ...++..|.+||+..+..++.++|||||||++|||+||+.||........+... . .
T Consensus 176 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (364)
T cd07875 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255 (364)
T ss_pred cCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHH
Confidence 4332211 122455688999998888999999999999999999999998743321100000 0 0
Q ss_pred ccccccccc---------------cC-CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 900 LGEMYNENE---------------VG-SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 900 ~~~~~~~~~---------------~~-~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
........+ .. ...........+.+++.+|++.||++|||++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000 00 000001122457899999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=319.73 Aligned_cols=242 Identities=14% Similarity=0.124 Sum_probs=182.8
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++++++|||||++++++.+++..|+||||++
T Consensus 5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~ 84 (376)
T cd05598 5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 84 (376)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCC
Confidence 678899999999999984 579999999996532 234567789999999999999999999999999999999999
Q ss_pred CCChhHHhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC------
Q 002186 770 NGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD------ 841 (955)
Q Consensus 770 ~gsL~~~l~~~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~------ 841 (955)
+|+|.+++.+. .+......++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 85 ~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~ 161 (376)
T cd05598 85 GGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161 (376)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccc
Confidence 99999999763 46666778899999999999998 99999999999999999999999999974221000
Q ss_pred ---------------------------------------CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCC
Q 002186 842 ---------------------------------------GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 882 (955)
Q Consensus 842 ---------------------------------------~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~ 882 (955)
.....++..|.+||+.....++.++|||||||++|||+||+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~ 241 (376)
T cd05598 162 KGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ 241 (376)
T ss_pred cccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCC
Confidence 00112455688899988888999999999999999999999
Q ss_pred CCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCC---CHHHHHHH
Q 002186 883 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP---SMEEALKL 946 (955)
Q Consensus 883 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RP---t~~ev~~~ 946 (955)
.||......... .... ........ +........+.+++.+|+ .+|.+|+ ++.|++++
T Consensus 242 ~Pf~~~~~~~~~--~~i~-~~~~~~~~---~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 242 PPFLADTPAETQ--LKVI-NWETTLHI---PSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred CCCCCCCHHHHH--HHHh-ccCccccC---CCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 999754321100 0000 00000000 000112233445555554 4999999 88998864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=312.56 Aligned_cols=243 Identities=21% Similarity=0.305 Sum_probs=188.5
Q ss_pred hhhhccCCCCCceEEEe-CCCCc----EEEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGI----TVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~----~vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
...+||.|+||+||||. .|.|+ +||+|++... .....++.+|+-+|++++|||++|++|+|.... ..||++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 56789999999999998 46664 7899988653 334778999999999999999999999998866 8899999
Q ss_pred cCCCChhHHhhcCC---CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 768 LPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~~~---~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
||.|+|.|+++.+. .-...+.|.+|||+||.|||.. .++||||-++|||+..-..+||.|||+++.........
T Consensus 779 mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred cccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 99999999998743 3445578999999999999988 99999999999999999999999999999876655433
Q ss_pred cc-----cccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 845 PA-----KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 845 ~~-----~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
.+ .+.|+ +-|.....+++.++|||||||.+||++| |.+|+++ .+.. .+.+.+..... .+.++-+
T Consensus 856 ~~~~gK~pikwm-ale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g-i~~~------eI~dlle~geR--LsqPpiC 925 (1177)
T KOG1025|consen 856 SAPGGKVPIKWM-ALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG-IPAE------EIPDLLEKGER--LSQPPIC 925 (1177)
T ss_pred cccccccCcHHH-HHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC-CCHH------HhhHHHhcccc--CCCCCCc
Confidence 32 23322 2366677889999999999999999999 5555542 2211 11111111100 1222334
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
..++..++.+||..|++.||+++|+...+.++.
T Consensus 926 tiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 926 TIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred cHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 456778889999999999999999998887653
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-33 Score=295.93 Aligned_cols=239 Identities=22% Similarity=0.282 Sum_probs=186.5
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.+|+|+||.||+|.. +|+.||+|.++... ..+.+.+|+..+++++||||+++++++..+ ..++||||+++|+|.
T Consensus 10 ~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~ 86 (254)
T cd05083 10 LGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLV 86 (254)
T ss_pred eeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHH
Confidence 778899999999999974 78899999986432 345678899999999999999999998764 479999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCcccccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAW 850 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~ 850 (955)
+++.. ..++.++..++.|+++|++|+|+. +++||||||+||+++.++.+|++|||++............. ..
T Consensus 87 ~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~-~~ 162 (254)
T cd05083 87 NFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLP-VK 162 (254)
T ss_pred HHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCC-ce
Confidence 99965 357888899999999999999998 99999999999999999999999999986543222111112 23
Q ss_pred cCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 851 TESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 851 ~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
|.+||+.....++.++|||||||++|||++ |+.|+..... .. ............ ........+.+++.+|
T Consensus 163 y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~--~~~~~~~~~~~~------~~~~~~~~~~~li~~~ 233 (254)
T cd05083 163 WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-KE--VKECVEKGYRME------PPEGCPADVYVLMTSC 233 (254)
T ss_pred ecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-HH--HHHHHhCCCCCC------CCCcCCHHHHHHHHHH
Confidence 678888877788899999999999999998 7777653221 10 000111100000 0112235677899999
Q ss_pred cCCCCCCCCCHHHHHHHhhc
Q 002186 930 TRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 930 l~~dp~~RPt~~ev~~~L~~ 949 (955)
|+.+|++||+++++++.|+.
T Consensus 234 l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 234 WETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred cCCChhhCcCHHHHHHHHcc
Confidence 99999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=303.66 Aligned_cols=241 Identities=17% Similarity=0.232 Sum_probs=191.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..+.+|.|++|.||+|+. .+|+.||||.+.... ...+.+.+|++.+++++||||+++++++...+..++||||+++|+
T Consensus 23 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 102 (296)
T cd06655 23 RYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGS 102 (296)
T ss_pred EEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCc
Confidence 778899999999999984 689999999986533 335677889999999999999999999999999999999999999
Q ss_pred hhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Cccccc
Q 002186 773 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKIA 849 (955)
Q Consensus 773 L~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~~~~ 849 (955)
|.+++.. ..++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......... ...+..
T Consensus 103 L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 179 (296)
T cd06655 103 LTDVVTETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 179 (296)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCc
Confidence 9999876 468999999999999999999998 9999999999999999999999999987654322211 112344
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
.|.+||......++.++|||||||++|||+||+.||......... ....... .............+.+++.+|
T Consensus 180 ~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~li~~~ 252 (296)
T cd06655 180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIATNG-TPELQNPEKLSPIFRDFLNRC 252 (296)
T ss_pred cccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHHhcC-CcccCCcccCCHHHHHHHHHH
Confidence 577889888778889999999999999999999998654321110 0000000 000011112234577888999
Q ss_pred cCCCCCCCCCHHHHHH
Q 002186 930 TRSTPSDRPSMEEALK 945 (955)
Q Consensus 930 l~~dp~~RPt~~ev~~ 945 (955)
|..||.+|||++++++
T Consensus 253 l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 253 LEMDVEKRGSAKELLQ 268 (296)
T ss_pred hhcChhhCCCHHHHhh
Confidence 9999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=317.20 Aligned_cols=248 Identities=17% Similarity=0.184 Sum_probs=186.4
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----eeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-----QAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~lv~ 765 (955)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+++++.++||||+++++++..++ ..|+||
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 83 (372)
T cd07853 4 PDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVT 83 (372)
T ss_pred ccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEe
Confidence 678899999999999995 589999999986432 23456788999999999999999999998776 789999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
||++ ++|.+.+.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 84 e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~ 159 (372)
T cd07853 84 ELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK 159 (372)
T ss_pred eccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence 9996 688888764 467888899999999999999998 9999999999999999999999999998754322211
Q ss_pred ---CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cc---------------cccc
Q 002186 844 ---FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL---------------LGEM 903 (955)
Q Consensus 844 ---~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~---------------~~~~ 903 (955)
......+|.+||+..+. .++.++||||+||++|||+||+.||............ .. ....
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 239 (372)
T cd07853 160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAH 239 (372)
T ss_pred cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHH
Confidence 11234567888887653 4788999999999999999999998744321100000 00 0000
Q ss_pred ccccccCCC------CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 904 YNENEVGSS------SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 904 ~~~~~~~~~------~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
......... ........++.+++.+|++.||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 240 ILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000000 0001123567899999999999999999999864
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=322.86 Aligned_cols=245 Identities=18% Similarity=0.208 Sum_probs=178.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcC--------CeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--------HQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--------~~~~lv~ 765 (955)
..+.||+|+||+||+|.. .+|+.||||++.... ....+|+.++++++|||||++++++... ...++||
T Consensus 70 ~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvm 146 (440)
T PTZ00036 70 LGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVM 146 (440)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEE
Confidence 778899999999999985 578999999986432 2345789999999999999999987532 2467999
Q ss_pred eecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-CceECccccccccc
Q 002186 766 DYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQ 838 (955)
Q Consensus 766 ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~-~~ki~DfGl~~~~~ 838 (955)
||++ |++.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||+++...
T Consensus 147 E~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~ 222 (440)
T PTZ00036 147 EFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLL 222 (440)
T ss_pred ecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccchhcc
Confidence 9998 477776642 457888889999999999999998 999999999999999664 69999999997654
Q ss_pred ccCCC-CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cccc--------cc---c
Q 002186 839 LADGS-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLG--------EM---Y 904 (955)
Q Consensus 839 ~~~~~-~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~~--------~~---~ 904 (955)
..... ...+.++|.+||+..+ ..++.++||||+||++|||+||..||.+.......... .... .+ +
T Consensus 223 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~ 302 (440)
T PTZ00036 223 AGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNY 302 (440)
T ss_pred CCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhh
Confidence 32221 1224556788897654 46889999999999999999999998743321100000 0000 00 0
Q ss_pred cccccC--CCCchH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 905 NENEVG--SSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 905 ~~~~~~--~~~~~~-----~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.....+ ...... ....++.+++.+||+.||.+|||+.|++++
T Consensus 303 ~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 303 ADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred hcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 000000 000000 123467899999999999999999999853
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-33 Score=299.95 Aligned_cols=240 Identities=21% Similarity=0.258 Sum_probs=185.9
Q ss_pred hccCCCCCceEEEeCCC-------CcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 698 EAARPQSAAGCKAVLPT-------GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~~~-------g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
.+|+|+||.||+|+..+ ++.||||.+.... .....+.+|++++++++||||++++++|...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 58999999999998532 3579999886543 34567888999999999999999999999999999999999
Q ss_pred CCCChhHHhhc---------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-----CceECccccc
Q 002186 769 PNGNLSEKIRT---------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-----EPHLAEFGFK 834 (955)
Q Consensus 769 ~~gsL~~~l~~---------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~-----~~ki~DfGl~ 834 (955)
++|+|.++++. ..+|.++..++.|++.|++|||+. +++|+||||+||+++.+. .+|++|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 99999999964 246788899999999999999988 999999999999999877 8999999998
Q ss_pred ccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccccccccc
Q 002186 835 YLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 835 ~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
+........ .......|.+||+.....++.++|||||||++|||+| |+.|+....... ....+......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~~~ 232 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE------VLQHVTAGGRL 232 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH------HHHHHhcCCcc
Confidence 654322111 1111234678898888888999999999999999998 888876332111 00000000001
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
. ........+.+++.+||+.+|.+||+++|+.+.|+.
T Consensus 233 ~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 233 Q---KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred C---CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1 111233567789999999999999999999999863
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=302.68 Aligned_cols=242 Identities=13% Similarity=0.116 Sum_probs=187.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||+||+|.. .+|+.||||.++.... ....+.+|++++++++|+||+++.+++..++..++||||++
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05632 4 QYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMN 83 (285)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEecc
Confidence 557799999999999985 5899999999865321 23456789999999999999999999999999999999999
Q ss_pred CCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-C
Q 002186 770 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-F 844 (955)
Q Consensus 770 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-~ 844 (955)
+|+|.+++.. ..++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05632 84 GGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG 160 (285)
T ss_pred CccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence 9999988854 468899999999999999999998 9999999999999999999999999998654322111 1
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..+...+.+||+..+..++.++|||||||++|||+||+.||........ ............ . .........+.+
T Consensus 161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~--~~~~~~~~~~~~-~---~~~~~~~~~~~~ 234 (285)
T cd05632 161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK--REEVDRRVLETE-E---VYSAKFSEEAKS 234 (285)
T ss_pred CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhhhccc-c---ccCccCCHHHHH
Confidence 2244557888988888899999999999999999999999874322110 000001111111 0 001122345678
Q ss_pred HHHHccCCCCCCCCC-----HHHHHH
Q 002186 925 VALLCTRSTPSDRPS-----MEEALK 945 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt-----~~ev~~ 945 (955)
++..|++.||++||+ ++|+++
T Consensus 235 li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 235 ICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred HHHHHccCCHhHcCCCcccChHHHHc
Confidence 888999999999999 666665
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=299.39 Aligned_cols=237 Identities=17% Similarity=0.238 Sum_probs=179.4
Q ss_pred hhccCCCCCceEEEeCC-C-------CcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 697 EEAARPQSAAGCKAVLP-T-------GITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~-~-------g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
+.||+|+||.||+|... + ...||+|.+..... ..+.+.+|+.++++++|||||++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 36899999999999853 2 33588888865332 355778899999999999999999999998999999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC--------ceECccccccc
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--------PHLAEFGFKYL 836 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~--------~ki~DfGl~~~ 836 (955)
+++|+|.++++. ..++..+..++.|++.|++|||+. +|+||||||+||+++.++. +|++|||++..
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 999999999975 358888999999999999999998 9999999999999987765 58999998754
Q ss_pred ccccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 837 TQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
..... ...+...|.+||+... ..++.++|||||||++|||++|+.++......... . ...... ...+.
T Consensus 158 ~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~--~----~~~~~~-~~~~~-- 226 (258)
T cd05078 158 VLPKE--ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK--L----QFYEDR-HQLPA-- 226 (258)
T ss_pred cCCch--hccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH--H----HHHHcc-ccCCC--
Confidence 33211 1122334677887765 45788999999999999999996554322111100 0 000111 00011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
....++.+++.+||+.||++|||++|+++.|+
T Consensus 227 -~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 227 -PKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11245778999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=297.84 Aligned_cols=241 Identities=16% Similarity=0.197 Sum_probs=189.4
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc------hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.+|+|++|.||+|.. .+|+.||+|.+..... ..+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 6 ~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 85 (263)
T cd06625 6 RGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEY 85 (263)
T ss_pred ccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEE
Confidence 778999999999999985 5789999999864321 234678899999999999999999999999999999999
Q ss_pred cCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---
Q 002186 768 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 842 (955)
Q Consensus 768 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--- 842 (955)
+++++|.+++.. ..++.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 86 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 162 (263)
T cd06625 86 MPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGT 162 (263)
T ss_pred CCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceeccccccccc
Confidence 999999999875 456777889999999999999998 999999999999999999999999999865432111
Q ss_pred --CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 843 --SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 843 --~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
....+...|.+||...+..++.++||||+||++|||++|+.||........ .......... .........
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~~~~~~~~~~--~~~~~~~~~ 234 (263)
T cd06625 163 GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA------IFKIATQPTN--PQLPSHVSP 234 (263)
T ss_pred cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH------HHHHhccCCC--CCCCccCCH
Confidence 111233457888988888889999999999999999999999864322110 0000000000 001112234
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+.+++.+||..+|.+|||++|++++
T Consensus 235 ~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 235 DARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 57788899999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=301.88 Aligned_cols=246 Identities=16% Similarity=0.203 Sum_probs=186.9
Q ss_pred hcccchhhhccCCCCCceEEEeCC------CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
+|. ..+.||+|+||.||+|... .+..||||.++.... ....+.+|+..+++++||||+++++++.+.+..
T Consensus 7 ~~~--i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (288)
T cd05061 7 KIT--LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT 84 (288)
T ss_pred Hce--eeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 455 7789999999999998632 356899998864332 234577899999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhcC------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 762 YLLYDYLPNGNLSEKIRTK------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~~------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
++||||+++|+|.+++++. ..+.....++.|++.||+|||+. +|+||||||+||+++.++.+|++
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEEC
Confidence 9999999999999999642 14556778999999999999998 99999999999999999999999
Q ss_pred cccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccc
Q 002186 830 EFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 830 DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
|||+++........ .......|.+||......++.++|||||||++|||++ |..|+..... . +......
T Consensus 162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-~-----~~~~~~~ 235 (288)
T cd05061 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-E-----QVLKFVM 235 (288)
T ss_pred cCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-H-----HHHHHHH
Confidence 99998754321111 1111233677888877788999999999999999999 5666642111 0 0111111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
+....... ......+.+++.+|++.||++|||+.|+++.|++
T Consensus 236 ~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 277 (288)
T cd05061 236 DGGYLDQP---DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 277 (288)
T ss_pred cCCCCCCC---CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 11101101 1223568899999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=296.88 Aligned_cols=246 Identities=15% Similarity=0.184 Sum_probs=188.8
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
.|. ..+.||+|+||.||+|.. .+++.||+|.++.... ....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 10 ~~~--~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 10 DFE--LIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHH--HHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 455 778899999999999985 5789999999875432 344577899999999999999999999999999999999
Q ss_pred cCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--C
Q 002186 768 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--S 843 (955)
Q Consensus 768 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~ 843 (955)
+++|+|.++++. ..++.+...++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++........ .
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06645 88 CGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRK 164 (267)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccc
Confidence 999999999865 467888899999999999999999 999999999999999999999999999865432211 1
Q ss_pred CcccccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 844 FPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
...+...|.+||+.. ...++.++||||+||++|||++|+.|+.......... . .......+.... .......
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~-~-~~~~~~~~~~~~---~~~~~~~ 239 (267)
T cd06645 165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-L-MTKSNFQPPKLK---DKMKWSN 239 (267)
T ss_pred cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH-h-hhccCCCCCccc---ccCCCCH
Confidence 112445578888763 3457889999999999999999999986432211100 0 000001111010 0011223
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.+.+++.+|++.||++|||++|+++
T Consensus 240 ~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 240 SFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHHHHHHHHccCCchhCcCHHHHhc
Confidence 5678899999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=313.83 Aligned_cols=247 Identities=15% Similarity=0.087 Sum_probs=186.8
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+.|. ..+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|+++++.++|||||++++++.+++..++
T Consensus 43 ~~y~--i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (371)
T cd05622 43 EDYE--VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 120 (371)
T ss_pred hhcE--EEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 3465 788999999999999985 478899999986422 224457789999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 764 LYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
||||+++|+|.+++.. ..+......++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 121 v~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~ 197 (371)
T cd05622 121 VMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 197 (371)
T ss_pred EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc
Confidence 9999999999999876 456677778999999999999998 999999999999999999999999999875432211
Q ss_pred ---CCcccccccCchhhhhcc----CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 843 ---SFPAKIAWTESGEFYNAM----KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 843 ---~~~~~~~~~~~~e~~~~~----~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
....++..|++||+.... .++.++||||+||++|||++|+.||....... ....+.........+..
T Consensus 198 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~ 271 (371)
T cd05622 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMNHKNSLTFPDD 271 (371)
T ss_pred ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH------HHHHHHcCCCcccCCCc
Confidence 122355668889987653 36789999999999999999999997433211 11111110000001111
Q ss_pred HHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSD--RPSMEEALKL 946 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~--RPt~~ev~~~ 946 (955)
......+.+++..|+..++.+ ||+++|++++
T Consensus 272 ~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 272 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 123345667888888744433 7899998875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=338.40 Aligned_cols=463 Identities=26% Similarity=0.326 Sum_probs=316.0
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
+|+.||+++|+++ ..|..+..+.+|+.|+++.|.+. ..|.+..++++|++|.|..|.+. ..|..+..+++|++|++|
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 3999999999986 78889999999999999999987 56788999999999999999887 689999999999999999
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCC
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~ 261 (955)
+|.+. .+|..+..++.++.+..++|..... ++... ++++++..|.+.+.++..+.+++. .|||+.|.+.
T Consensus 123 ~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~--- 191 (1081)
T KOG0618|consen 123 FNHFG-PIPLVIEVLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME--- 191 (1081)
T ss_pred hhccC-CCchhHHhhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---
Confidence 99987 7888899999999999999832222 22222 788888888888888888888877 7899999886
Q ss_pred CccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCC
Q 002186 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341 (955)
Q Consensus 262 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 341 (955)
-..+.++.+|+.|....|++.... -..++|+.|+.++|.++...+. ..-.+|+++++++|++++ +|++++.+.
T Consensus 192 ~~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~~-lp~wi~~~~ 264 (1081)
T KOG0618|consen 192 VLDLSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLSN-LPEWIGACA 264 (1081)
T ss_pred hhhhhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeeccc--cccccceeeecchhhhhc-chHHHHhcc
Confidence 234666777888887777776432 2234666777777766622211 122456677777777763 446677777
Q ss_pred CccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCC-CcEEEC
Q 002186 342 SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSS-LVRLRL 420 (955)
Q Consensus 342 ~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~-L~~L~L 420 (955)
+|+.++..+|+++ .+|..+...++|+.|+...|.+. .+|+.......|+.|+|..|++....+..+.-... |..|+.
T Consensus 265 nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~ 342 (1081)
T KOG0618|consen 265 NLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNV 342 (1081)
T ss_pred cceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhh
Confidence 7777777777764 56666666666677776666665 45555555666667777777665443333332222 555555
Q ss_pred cCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCC
Q 002186 421 EDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITG 500 (955)
Q Consensus 421 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~ 500 (955)
+.|+++......=..++.|+.|++.+|.++...-..+.+..+|+.|+|++| .+.......+.+++.|++|++|+|.++.
T Consensus 343 s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyN-rL~~fpas~~~kle~LeeL~LSGNkL~~ 421 (1081)
T KOG0618|consen 343 SSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYN-RLNSFPASKLRKLEELEELNLSGNKLTT 421 (1081)
T ss_pred hhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccc-ccccCCHHHHhchHHhHHHhcccchhhh
Confidence 666555332211223445666666666666555555556666666666666 3332222334456666666666666653
Q ss_pred CCCCCCcCCccceEeccccccccccCCCCCcccccceeeecccccccc-chhhhcCCCCCcEEECCCCCCccccCCCcCC
Q 002186 501 NLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGS-IPEVLARLPVLGVLDLSHNSLSGQIPAKFGS 579 (955)
Q Consensus 501 ~~p~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 579 (955)
.......+..|++|..+.|++. ..| .+..++.|+.+|+|.|+|+.. +|... ..++|++|||++|.-.-.....|..
T Consensus 422 Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~-p~p~LkyLdlSGN~~l~~d~~~l~~ 498 (1081)
T KOG0618|consen 422 LPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEAL-PSPNLKYLDLSGNTRLVFDHKTLKV 498 (1081)
T ss_pred hhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhC-CCcccceeeccCCcccccchhhhHH
Confidence 2222255666677777777775 455 777888888888888888754 33332 2378888888888754455566667
Q ss_pred CCCCcEEECCCC
Q 002186 580 CSSLTVLNVSFN 591 (955)
Q Consensus 580 l~~L~~L~ls~N 591 (955)
+.++..+++.-|
T Consensus 499 l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 499 LKSLSQMDITLN 510 (1081)
T ss_pred hhhhhheecccC
Confidence 777777777766
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-33 Score=301.91 Aligned_cols=242 Identities=14% Similarity=0.115 Sum_probs=188.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|+.++++++|+||+++++.+.+.+..++||||++
T Consensus 4 ~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05630 4 QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN 83 (285)
T ss_pred eeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecC
Confidence 567899999999999985 5799999999865321 23456789999999999999999999999999999999999
Q ss_pred CCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-C
Q 002186 770 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-F 844 (955)
Q Consensus 770 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-~ 844 (955)
+|+|.+++.. ..++.+...++.|++.|++|||+. +|+||||||+||+++.++.++++|||++......... .
T Consensus 84 g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05630 84 GGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 160 (285)
T ss_pred CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence 9999998853 367888899999999999999988 9999999999999999999999999998654322211 1
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..+...+.+||+.....++.++|||||||++|||++|+.||........+ ............... ......+.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~ 234 (285)
T cd05630 161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR---EEVERLVKEVQEEYS---EKFSPDARS 234 (285)
T ss_pred CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH---HHHHhhhhhhhhhcC---ccCCHHHHH
Confidence 12445578899988888999999999999999999999998743221110 000111111000001 112345678
Q ss_pred HHHHccCCCCCCCCC-----HHHHHH
Q 002186 925 VALLCTRSTPSDRPS-----MEEALK 945 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt-----~~ev~~ 945 (955)
++.+||+.||++||| ++|+++
T Consensus 235 li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 235 LCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HHHHHhhcCHHHccCCCCCchHHHHc
Confidence 889999999999999 888876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=302.07 Aligned_cols=245 Identities=22% Similarity=0.262 Sum_probs=189.2
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHH---HHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIK---IVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~---~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|+||+||++... +++.||+|++........ ...+|+..+++++||||+++++++.+.+..++||||+++
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~ 82 (260)
T PF00069_consen 3 LVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPG 82 (260)
T ss_dssp EEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETT
T ss_pred EeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccc
Confidence 5678999999999999965 677899999986543322 334589999999999999999999999999999999999
Q ss_pred CChhHHhh--cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc--cCCCCcc
Q 002186 771 GNLSEKIR--TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL--ADGSFPA 846 (955)
Q Consensus 771 gsL~~~l~--~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~--~~~~~~~ 846 (955)
++|.+++. ...++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||.+..... .......
T Consensus 83 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 159 (260)
T PF00069_consen 83 GSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFV 159 (260)
T ss_dssp EBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSS
T ss_pred ccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccc
Confidence 99999997 4678999999999999999999999 999999999999999999999999999864211 1111122
Q ss_pred cccccCchhhhh-ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
....+.+||... ....+.++||||+|+++|||++|+.|+...... .......+...................+.++
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 236 (260)
T PF00069_consen 160 GTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD---DQLEIIEKILKRPLPSSSQQSREKSEELRDL 236 (260)
T ss_dssp SSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH---HHHHHHHHHHHTHHHHHTTSHTTSHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccch---hhhhhhhhcccccccccccccchhHHHHHHH
Confidence 445678889887 788999999999999999999999998743100 0001111111000000000001112678899
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 002186 926 ALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+..||+.||++||+++|+++
T Consensus 237 i~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 237 IKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHSSSSGGGSTTHHHHHT
T ss_pred HHHHccCChhHCcCHHHHhc
Confidence 99999999999999999985
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=297.09 Aligned_cols=241 Identities=17% Similarity=0.243 Sum_probs=188.7
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc-------hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||.|+||.||+|...+|+.+|||.++.... ..+.+.+|++.+++++|+||++++++|.+.+..++||||
T Consensus 4 ~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (265)
T cd06631 4 KGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEF 83 (265)
T ss_pred ccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEec
Confidence 5678999999999999988999999999864321 134578899999999999999999999999999999999
Q ss_pred cCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---
Q 002186 768 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 842 (955)
Q Consensus 768 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--- 842 (955)
+++|+|.+++.+ ..++.....++.|++.|++|+|+. +|+|+||||+||+++.++.+|++|||++........
T Consensus 84 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (265)
T cd06631 84 VPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGT 160 (265)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccc
Confidence 999999999975 457788889999999999999998 999999999999999999999999998865321110
Q ss_pred -----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 843 -----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 843 -----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
....+...+.+||+..+..++.++||||+||++|||+||+.||................... + .....
T Consensus 161 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~------~~~~~ 233 (265)
T cd06631 161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLM-P------RLPDS 233 (265)
T ss_pred ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCC-C------CCCCC
Confidence 01123445778898888888999999999999999999999986432211100000000000 0 01112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....+.+++.+||+.+|++||++.|+++
T Consensus 234 ~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 234 FSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 2345778899999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=301.51 Aligned_cols=244 Identities=17% Similarity=0.204 Sum_probs=189.4
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|... +|+.||+|.++... ...+.+.+|++++++++||||+++++++..++..++||||++++
T Consensus 5 ~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (286)
T cd06622 5 VLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAG 84 (286)
T ss_pred hhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCC
Confidence 7788999999999999965 89999999987532 23457888999999999999999999999999999999999999
Q ss_pred ChhHHhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCcc
Q 002186 772 NLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA 846 (955)
Q Consensus 772 sL~~~l~~-----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~ 846 (955)
+|.++++. ..++.....++.|+++|+.|||+.+ +|+||||||+||+++.++.+|++|||++............
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (286)
T cd06622 85 SLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNI 162 (286)
T ss_pred CHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCC
Confidence 99999876 5688899999999999999999632 8999999999999999999999999998654332222222
Q ss_pred cccccCchhhhhcc------CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 847 KIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 847 ~~~~~~~~e~~~~~------~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
+...+.+||...+. .++.++|||||||++|||+||+.||....... . ...........+. ....+...
T Consensus 163 ~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~-~~~~~~~~~~~~~---~~~~~~~~ 236 (286)
T cd06622 163 GCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--I-FAQLSAIVDGDPP---TLPSGYSD 236 (286)
T ss_pred CccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--H-HHHHHHHhhcCCC---CCCcccCH
Confidence 33446677876443 34788999999999999999999986432111 0 0111111111111 11123445
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+.+++.+|++.+|++||+++|++..
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 237 DAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred HHHHHHHHHcccCcccCCCHHHHhcC
Confidence 67789999999999999999999863
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=317.41 Aligned_cols=246 Identities=15% Similarity=0.110 Sum_probs=185.9
Q ss_pred ccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 692 NSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 692 ~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
.+.....||+|+||.||+|... +++.||||.... ..+.+|++++++++|||||++++++...+..++||||+.
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~- 243 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR- 243 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-
Confidence 3447788999999999999965 688999996432 235679999999999999999999999999999999995
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC----
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---- 843 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~---- 843 (955)
|+|.+++.. .++|.++..|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 244 ~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 244 SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence 799988864 468999999999999999999998 9999999999999999999999999998764322111
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCC-CCccccccccccc-------cc---------
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL-QNKPIDGLLGEMY-------NE--------- 906 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~-~~~~~~~~~~~~~-------~~--------- 906 (955)
...++..|.+||+..+..++.++|||||||++|||++|..++...... ........+.+++ +.
T Consensus 321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l 400 (461)
T PHA03211 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL 400 (461)
T ss_pred ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence 122455688899998888999999999999999999998776532210 0000000000000 00
Q ss_pred ------------cccCCCCchH---HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 907 ------------NEVGSSSSLQ---DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 907 ------------~~~~~~~~~~---~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+......+. .....+.+++.+||+.||++|||+.|++++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000001111 112357789999999999999999999875
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=298.85 Aligned_cols=242 Identities=17% Similarity=0.171 Sum_probs=186.4
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
....||+|+||.||+|... ++..+|+|.+.... ...+.+.+|++++++++||||++++++|...+..++||||+++|+
T Consensus 9 i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~ 88 (282)
T cd06643 9 IIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGA 88 (282)
T ss_pred HHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCc
Confidence 6678999999999999964 68889999986543 335567889999999999999999999999999999999999999
Q ss_pred hhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccc
Q 002186 773 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 847 (955)
Q Consensus 773 L~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~ 847 (955)
|.+++.+ ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++|||++........ ....+
T Consensus 89 l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 165 (282)
T cd06643 89 VDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIG 165 (282)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccccccccccc
Confidence 9998754 468889999999999999999998 999999999999999999999999999865422211 11123
Q ss_pred ccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 848 IAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 848 ~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...|.+||+.. ...++.++|||||||++|||++|+.|+....... ............ ..........+
T Consensus 166 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~ 238 (282)
T cd06643 166 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKSEPPT-LAQPSRWSSEF 238 (282)
T ss_pred cccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH------HHHHHhhcCCCC-CCCccccCHHH
Confidence 44577888763 3456788999999999999999999886432111 000010000000 00111223457
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+++.+||+.||.+||++++++++
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 239 KDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred HHHHHHHccCChhhCcCHHHHhcC
Confidence 789999999999999999999864
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=304.13 Aligned_cols=248 Identities=21% Similarity=0.260 Sum_probs=189.6
Q ss_pred hcccchhhhccCCCCCceEEEeC--------CCCcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR 758 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~--------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 758 (955)
+|. ..+.+|+|+||.||+|.. .++..||+|.++... .....+.+|+++++++ +|||||+++++|...
T Consensus 13 ~~~--~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 13 RLV--LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred Hee--eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 455 778899999999999863 235679999987532 2345677899999999 699999999999999
Q ss_pred CeeEEEEeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 759 HQAYLLYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
+..++||||+++|+|.+++.. ..+|.+...++.|++.||+|||+. +|+||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEE
Confidence 999999999999999999854 256788889999999999999998 99999999999999
Q ss_pred CCCCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
+.++.+|++|||+++........ .......|++||......++.++|||||||++|||+| |..|+.... ..
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~-~~--- 243 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP-VE--- 243 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC-HH---
Confidence 99999999999998754322111 0111123778898877788999999999999999999 777764321 11
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
............. .......++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 244 --~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 244 --ELFKLLREGHRMD---KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred --HHHHHHHcCCCCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 0000111110000 01122345778999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=299.40 Aligned_cols=248 Identities=15% Similarity=0.159 Sum_probs=186.9
Q ss_pred HhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEE-----cCC
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCY-----NRH 759 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~-----~~~ 759 (955)
..++|. ....||+|+||+||+|+. .+|+.+|+|.++........+.+|+.+++++ +||||++++++|. ..+
T Consensus 16 ~~~~~~--~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~ 93 (286)
T cd06638 16 PSDTWE--IIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGD 93 (286)
T ss_pred ccccee--eeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCC
Confidence 334566 778899999999999985 5788999999875444456678899999998 6999999999884 345
Q ss_pred eeEEEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl 833 (955)
..++||||+++|+|.++++. ..++.....++.|+++|+.|||+. +|+||||||+||+++.++.+|++|||+
T Consensus 94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~dfg~ 170 (286)
T cd06638 94 QLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGV 170 (286)
T ss_pred eEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEccCCc
Confidence 78999999999999998753 356777888999999999999998 999999999999999999999999999
Q ss_pred cccccccCC--CCcccccccCchhhhhc-----cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccc
Q 002186 834 KYLTQLADG--SFPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 906 (955)
Q Consensus 834 ~~~~~~~~~--~~~~~~~~~~~~e~~~~-----~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 906 (955)
++....... ....+...|.+||+... ..++.++||||+||++|||+||+.|+........... ......+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~---~~~~~~~ 247 (286)
T cd06638 171 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK---IPRNPPP 247 (286)
T ss_pred eeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh---ccccCCC
Confidence 865432211 11223444677887642 3468899999999999999999999875432111100 0000000
Q ss_pred cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 907 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
. .... ......+.+++.+||+.||++|||++|+++.
T Consensus 248 ~-~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 248 T-LHQP---ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred c-ccCC---CCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 0 0001 1112457789999999999999999999875
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=296.05 Aligned_cols=240 Identities=16% Similarity=0.197 Sum_probs=172.5
Q ss_pred hccCCCCCceEEEeCCCC---cEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 698 EAARPQSAAGCKAVLPTG---ITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~~~g---~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
+||+|+||.||+|...++ ..+++|.++... ...+.+.+|+..+++++|||||+++++|.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999985443 345677665432 235678899999999999999999999999999999999999999
Q ss_pred hhHHhhcC------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC----C
Q 002186 773 LSEKIRTK------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD----G 842 (955)
Q Consensus 773 L~~~l~~~------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~----~ 842 (955)
|.+++++. .++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||++....... .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 99999752 24455678999999999999998 99999999999999999999999999875321111 0
Q ss_pred CCcccccccCchhhhhc-------cCCcccccchhHHHHHHHHHhCCC-CCCCCCCCCCccc---cccccccccccccCC
Q 002186 843 SFPAKIAWTESGEFYNA-------MKEEMYMDVYGFGEIILEILTNGR-LTNAGSSLQNKPI---DGLLGEMYNENEVGS 911 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~-------~~~~~~~DV~S~Gvvl~Elltg~~-p~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 911 (955)
....+...|.+||+... ...+.++|||||||++|||++++. |+..... ..... ........++.
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~---- 233 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-REVLNHVIKDQQVKLFKPQ---- 233 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHhhcccccCCCc----
Confidence 11112233567776532 245778999999999999998654 5432221 10000 00001111111
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
........+.+++..|| .+|++||+++||++.|.
T Consensus 234 --~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 234 --LELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred --cCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 01112244566777899 67999999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=297.89 Aligned_cols=248 Identities=17% Similarity=0.174 Sum_probs=191.6
Q ss_pred hhhhccCCCCCceEEEeCCC----CcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLPT----GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~----g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.+|+|+||.||+|...+ ...||||...... ...+.+.+|++++++++||||++++++|.+ +..++||||+
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~ 88 (270)
T cd05056 10 LGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELA 88 (270)
T ss_pred eeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcC
Confidence 66789999999999998533 3469999886543 235678899999999999999999999875 5678999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
++|+|.+++.. ..++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++........
T Consensus 89 ~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 165 (270)
T cd05056 89 PLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKA 165 (270)
T ss_pred CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecccccceec
Confidence 99999999975 358889999999999999999988 9999999999999999999999999998754332111
Q ss_pred -CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 844 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 844 -~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
.......|.+||......++.++|||||||++|||++ |..||........ ............. ......
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~------~~~~~~~~~~~~~---~~~~~~ 236 (270)
T cd05056 166 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV------IGRIENGERLPMP---PNCPPT 236 (270)
T ss_pred CCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH------HHHHHcCCcCCCC---CCCCHH
Confidence 1111224678888877788899999999999999986 8888864322110 0000000001111 122346
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhccCCCCC
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGLKPHGK 955 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~~~ 955 (955)
+.+++.+|+..+|++|||+.|+++.|+.++.+.|
T Consensus 237 ~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~~ 270 (270)
T cd05056 237 LYSLMTKCWAYDPSKRPRFTELKAQLSDILQEEK 270 (270)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhccC
Confidence 7788999999999999999999999998876543
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=307.08 Aligned_cols=233 Identities=16% Similarity=0.125 Sum_probs=181.8
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
....||+|+||.||+|.. .+|+.||||+++... ...+.+..|+++++.+. |++|+++++++.+.+..|+||||+
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~ 83 (323)
T cd05615 4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYV 83 (323)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCC
Confidence 567899999999999984 579999999997532 22345667788888775 577888999999999999999999
Q ss_pred CCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CC
Q 002186 769 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SF 844 (955)
Q Consensus 769 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~ 844 (955)
++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 84 ~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~ 160 (323)
T cd05615 84 NGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT 160 (323)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccC
Confidence 99999999875 468888999999999999999998 999999999999999999999999999865322211 11
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..++..|.+||+..+..++.++||||+||++|||+||+.||...... .....+.... ...+ .....++.+
T Consensus 161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~------~~~~~i~~~~-~~~p---~~~~~~~~~ 230 (323)
T cd05615 161 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED------ELFQSIMEHN-VSYP---KSLSKEAVS 230 (323)
T ss_pred ccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCC-CCCC---ccCCHHHHH
Confidence 22455678899988888899999999999999999999998743211 0111111111 1101 122345678
Q ss_pred HHHHccCCCCCCCCCH
Q 002186 925 VALLCTRSTPSDRPSM 940 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~ 940 (955)
++.+|++.||++|++.
T Consensus 231 li~~~l~~~p~~R~~~ 246 (323)
T cd05615 231 ICKGLMTKHPSKRLGC 246 (323)
T ss_pred HHHHHcccCHhhCCCC
Confidence 8899999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=298.37 Aligned_cols=248 Identities=20% Similarity=0.240 Sum_probs=187.9
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
....+|+|++|.||+|... +|+.||+|++.... ...+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (286)
T cd07847 5 KLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDH 84 (286)
T ss_pred eeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCc
Confidence 6678999999999999965 69999999986432 1245678899999999999999999999999999999999999
Q ss_pred CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Ccc
Q 002186 771 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 846 (955)
Q Consensus 771 gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~ 846 (955)
+.|..++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......... ...
T Consensus 85 ~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 161 (286)
T cd07847 85 TVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYV 161 (286)
T ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcc
Confidence 988888764 468888999999999999999998 9999999999999999999999999998765432211 112
Q ss_pred cccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc-cc----cc-------------cccccccc
Q 002186 847 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-ID----GL-------------LGEMYNEN 907 (955)
Q Consensus 847 ~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~-~~----~~-------------~~~~~~~~ 907 (955)
+..++.+||+..+ ..++.++|||||||++|||+||+.||.+........ .. .. ......+.
T Consensus 162 ~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (286)
T cd07847 162 ATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPE 241 (286)
T ss_pred cccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCC
Confidence 3445677887655 457889999999999999999999887433211000 00 00 00000000
Q ss_pred ccCCCC---chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 908 EVGSSS---SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 908 ~~~~~~---~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+....+ ..+.....+.+++.+||+.||++|||+.|++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 242 PETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000 00122356789999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=292.53 Aligned_cols=241 Identities=16% Similarity=0.213 Sum_probs=191.1
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|+||.||.+. ..+|+.||+|.+... ....+.+.+|++++++++|+||+++++++.+.+..++||||+++
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (256)
T cd08221 4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANG 83 (256)
T ss_pred EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCC
Confidence 67889999999998887 457899999998653 23355678999999999999999999999999999999999999
Q ss_pred CChhHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CC
Q 002186 771 GNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SF 844 (955)
Q Consensus 771 gsL~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~ 844 (955)
|+|.+++... .++.+...++.|+++|++|||+. +++||||||+||+++.++.+||+|||++........ ..
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08221 84 GTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET 160 (256)
T ss_pred CcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence 9999999763 57888899999999999999998 999999999999999999999999999875433221 11
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..+...|.+||+..+...+.++|||||||++|||++|+.|+....... ....+...... +........+.+
T Consensus 161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------~~~~~~~~~~~---~~~~~~~~~~~~ 231 (256)
T cd08221 161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN------LVVKIVQGNYT---PVVSVYSSELIS 231 (256)
T ss_pred cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCCCC---CCccccCHHHHH
Confidence 223455778888877778889999999999999999999886432111 11111111101 111223355778
Q ss_pred HHHHccCCCCCCCCCHHHHHHHh
Q 002186 925 VALLCTRSTPSDRPSMEEALKLL 947 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~ev~~~L 947 (955)
++.+||+.+|++||+++|+++++
T Consensus 232 ~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 232 LVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HHHHHcccCcccCCCHHHHhhCc
Confidence 89999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-34 Score=280.39 Aligned_cols=243 Identities=15% Similarity=0.209 Sum_probs=197.8
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
|. ...++|+|+||.||||.. .+|..||||++.... ..+++.+||.+|++.+.|++|+++|.|......++|||||.
T Consensus 35 FD--i~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 35 FD--IVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HH--HHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 66 788999999999999985 689999999987543 45677788999999999999999998888888999999999
Q ss_pred CCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC--CCC
Q 002186 770 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSF 844 (955)
Q Consensus 770 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~--~~~ 844 (955)
.||..|.++. .+...+...|.....+||+|||.. .-||||||+.|||++.+|.+|++|||.|......- ...
T Consensus 112 AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNT 188 (502)
T KOG0574|consen 112 AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNT 188 (502)
T ss_pred CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCc
Confidence 9999999874 456777788999999999999988 78999999999999999999999999986543321 122
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..+++++++||+.....|++++||||+|+...||..|++|+.+-.+... . -++...+.+....++.-..++-+
T Consensus 189 VIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA-----I--FMIPT~PPPTF~KPE~WS~~F~D 261 (502)
T KOG0574|consen 189 VIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA-----I--FMIPTKPPPTFKKPEEWSSEFND 261 (502)
T ss_pred cccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce-----e--EeccCCCCCCCCChHhhhhHHHH
Confidence 3378889999999999999999999999999999999998864332211 1 11111222222233455667889
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 002186 925 VALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
++..|+...|++|-|+-+++++
T Consensus 262 Fi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 262 FIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred HHHHHhcCCHHHHHHHHHHhhh
Confidence 9999999999999999988764
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=299.93 Aligned_cols=247 Identities=19% Similarity=0.214 Sum_probs=180.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhcc---CCCCceeEeEEEEc-----CCeeE
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTV---RHKNLIRLLGFCYN-----RHQAY 762 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l---~H~niv~l~g~~~~-----~~~~~ 762 (955)
..+.||+|+||+||+|.. .+|+.||+|.++.... ....+.+|+++++++ +||||+++++++.. ....+
T Consensus 4 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~ 83 (288)
T cd07863 4 PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVT 83 (288)
T ss_pred EeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEE
Confidence 667899999999999985 5799999999875321 123445666666554 79999999999864 24589
Q ss_pred EEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
+||||++ ++|.+++.. ..++.....++.|++.||+|+|+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 84 LVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred EEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 9999997 589888865 357888899999999999999998 99999999999999999999999999987654
Q ss_pred ccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Cccccccc-c
Q 002186 839 LADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLL-G 901 (955)
Q Consensus 839 ~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~-~ 901 (955)
..... ...+...|.+||+..+..++.++||||+||++|||++|+.||....... .|...... .
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07863 160 CQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPR 239 (288)
T ss_pred CcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccc
Confidence 32211 1123455788998888889999999999999999999998876432110 00000000 0
Q ss_pred cccccccc-CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 902 EMYNENEV-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 902 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..+.+... ......++....+.+++.+|++.||++|||+.|++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 240 GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000 000001122345779999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=328.17 Aligned_cols=251 Identities=16% Similarity=0.206 Sum_probs=189.2
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc--CCeeE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAY 762 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~ 762 (955)
..|. ....||+|+||+||+|.. .++..||+|.+.... .....+..|+.++++++|||||++++++.+ .+.+|
T Consensus 13 ~~Ye--Il~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 13 NEYE--VIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred CCEE--EEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 4465 788999999999999985 468889999987532 235567889999999999999999998854 45789
Q ss_pred EEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCC----CCcccCCCCCCCeeeCC----------
Q 002186 763 LLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCY----PAIPHGDLKASNIVFDE---------- 822 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~----~~iiHrdlk~~NiLl~~---------- 822 (955)
|||||+++|+|.++|.. .+++...+.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 99999999999999864 46888899999999999999998532 36999999999999964
Q ss_pred -------CCCceECcccccccccccCC-CCcccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC
Q 002186 823 -------NMEPHLAEFGFKYLTQLADG-SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ 892 (955)
Q Consensus 823 -------~~~~ki~DfGl~~~~~~~~~-~~~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~ 892 (955)
...+||+|||+++....... ....+++.|.+||+... ..++.++||||||||+|||+||+.||.......
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~ 250 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFS 250 (1021)
T ss_pred cccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHH
Confidence 23489999999876533221 12234566888898743 457889999999999999999999987443221
Q ss_pred CccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--Hhhcc
Q 002186 893 NKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK--LLSGL 950 (955)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~--~L~~~ 950 (955)
. .+..+......+. ......+.+++..||+.+|++||++.|++. .++.+
T Consensus 251 q-----li~~lk~~p~lpi----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 251 Q-----LISELKRGPDLPI----KGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred H-----HHHHHhcCCCCCc----CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 1 1111111000110 112345778899999999999999999984 44443
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=301.99 Aligned_cols=243 Identities=19% Similarity=0.260 Sum_probs=186.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCc----EEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGI----TVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~----~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||.||+|.. .+|. .||+|.+..... ....+.+|+.++++++||||++++|+|..+ ..++|+||
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~ 89 (303)
T cd05110 11 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQL 89 (303)
T ss_pred eccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeehh
Confidence 677899999999999984 4554 578898865322 244678899999999999999999999764 46799999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 90 ~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 166 (303)
T cd05110 90 MPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 166 (303)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccccCccccc
Confidence 999999999875 357888899999999999999998 99999999999999999999999999987643222111
Q ss_pred ----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 845 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 845 ----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
......|.+||+..+..++.++|||||||++|||+| |+.|+..... .. ........ .. .... ....
T Consensus 167 ~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-~~--~~~~~~~~--~~-~~~~---~~~~ 237 (303)
T cd05110 167 NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-RE--IPDLLEKG--ER-LPQP---PICT 237 (303)
T ss_pred ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-HH--HHHHHHCC--CC-CCCC---CCCC
Confidence 112234677888888888999999999999999998 7887753211 00 00000000 00 1001 1123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
..+.+++..||..+|++||+++|+++.|+.+
T Consensus 238 ~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 238 IDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 4577889999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=293.63 Aligned_cols=240 Identities=15% Similarity=0.174 Sum_probs=188.4
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.+|+|+||.||++.. .+|+.||+|.++.. ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 4 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 83 (255)
T cd08219 4 VLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGG 83 (255)
T ss_pred EEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCC
Confidence 567899999999999985 47899999998643 223566788999999999999999999999999999999999999
Q ss_pred ChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Cc
Q 002186 772 NLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FP 845 (955)
Q Consensus 772 sL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~ 845 (955)
+|.+++.. ..+......++.|++.|+.|||+. +|+|+||||+||+++.++.++++|||.+......... ..
T Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (255)
T cd08219 84 DLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY 160 (255)
T ss_pred cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccccccccc
Confidence 99998864 246777889999999999999998 9999999999999999999999999998654322111 11
Q ss_pred ccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 846 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
.+...+.+||+.....++.++|||||||++|||++|+.||....... .............+ ......+.++
T Consensus 161 ~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~l 231 (255)
T cd08219 161 VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN------LILKVCQGSYKPLP---SHYSYELRSL 231 (255)
T ss_pred cCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH------HHHHHhcCCCCCCC---cccCHHHHHH
Confidence 23444778898888888999999999999999999999986432110 00011000000001 1123456788
Q ss_pred HHHccCCCCCCCCCHHHHHHH
Q 002186 926 ALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.+||+.||++|||++|++..
T Consensus 232 i~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 232 IKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHhCCcccCCCHHHHhhc
Confidence 899999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=304.34 Aligned_cols=239 Identities=18% Similarity=0.258 Sum_probs=189.2
Q ss_pred hhhhccCCCCCceEEEeC--CCCc--EEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVL--PTGI--TVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~--~~g~--~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..++||+|.||+|.+|.+ +.|+ .||||.++.+.. ....|.+|+..|.+++|||+|+|+|+..+ ...+||||.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 567899999999999985 4565 489999986543 46789999999999999999999999987 6788999999
Q ss_pred CCCChhHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 769 PNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 769 ~~gsL~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
+.|||.+.|++. +-...-..++.|||+||.||... +.||||+-.+|+|+.....+||+|||+.+.+...+..+
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Y 269 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMY 269 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCCcce
Confidence 999999999872 23455678999999999999999 99999999999999999999999999988766554433
Q ss_pred ------cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 845 ------PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 845 ------~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
...++|. +||.....+++.++|||+|||.+|||+|++.-.+.+..- ..+.+.+|..+. .+..+.+
T Consensus 270 vm~p~rkvPfAWC-aPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g------~qIL~~iD~~er--LpRPk~c 340 (1039)
T KOG0199|consen 270 VMAPQRKVPFAWC-APESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG------IQILKNIDAGER--LPRPKYC 340 (1039)
T ss_pred EecCCCcCccccc-CHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH------HHHHHhcccccc--CCCCCCC
Confidence 2245544 568888899999999999999999999965433222110 111122222211 1223456
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+++.+++..||...|++|||+..+.+.
T Consensus 341 sedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 341 SEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred hHHHHHHHHHhccCCccccccHHHHHHh
Confidence 6788899999999999999999999743
|
|
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=313.25 Aligned_cols=244 Identities=16% Similarity=0.105 Sum_probs=185.5
Q ss_pred hhhhccCCCCCceEEEeC---CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL---PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~---~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
....||+|+||.||+|.. .+++.||||.+... +...+|++++++++|||||++++++...+..++||||+. +
T Consensus 96 i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 170 (392)
T PHA03207 96 ILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-C 170 (392)
T ss_pred EEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-C
Confidence 778899999999999974 35678999988643 234578999999999999999999999999999999996 6
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC----Cc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----FP 845 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~----~~ 845 (955)
+|.+++.. .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........ ..
T Consensus 171 ~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~ 247 (392)
T PHA03207 171 DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGW 247 (392)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCccccccccccc
Confidence 89888854 568999999999999999999998 9999999999999999999999999998654332211 11
Q ss_pred ccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc-cccccc----------------------cc
Q 002186 846 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK-PIDGLL----------------------GE 902 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~-~~~~~~----------------------~~ 902 (955)
.++..|.+||+.....++.++|||||||++|||++|+.||.+....... ...... .+
T Consensus 248 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (392)
T PHA03207 248 SGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQ 327 (392)
T ss_pred ccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHh
Confidence 2455678899998888999999999999999999999998754321100 000000 00
Q ss_pred ccc-cc-ccCCCCch--HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 903 MYN-EN-EVGSSSSL--QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 903 ~~~-~~-~~~~~~~~--~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
... .. +...+... .....++.+++.+|+..||++|||+.|++.+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 328 YAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred hcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000 00 00000000 0112356678899999999999999999864
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=309.02 Aligned_cols=187 Identities=17% Similarity=0.136 Sum_probs=156.9
Q ss_pred ccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 692 NSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 692 ~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
.|...+.||+|+||.||+|+.. +++.||+|..... ....|+.++++++|||||++++++.+.+..++||||+.
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 140 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS- 140 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-
Confidence 3448889999999999999964 6788999975432 23458899999999999999999999999999999995
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-CCcc
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 846 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-~~~~ 846 (955)
|+|.+++.. ..++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 141 ~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 217 (357)
T PHA03209 141 SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA 217 (357)
T ss_pred CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccCccccccc
Confidence 689888864 468999999999999999999998 999999999999999999999999999865322211 1122
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCC
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 887 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~ 887 (955)
++..|.+||+.....++.++|||||||++|||+++..++..
T Consensus 218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~ 258 (357)
T PHA03209 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFE 258 (357)
T ss_pred ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcccc
Confidence 45567888988888899999999999999999998777653
|
|
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=296.68 Aligned_cols=248 Identities=19% Similarity=0.212 Sum_probs=188.6
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ey~~ 769 (955)
..+.+|.|++|.||+|.. .+++.||+|.+..... ....+.+|++.+++++||||++++++|... +..++||||++
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 84 (287)
T cd06621 5 ELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCE 84 (287)
T ss_pred EEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecC
Confidence 678899999999999996 4788999999875332 356688899999999999999999998653 47899999999
Q ss_pred CCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 770 NGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 770 ~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
+|+|.+++.. ..+......++.|+++||+|||+. +++|+||+|.||+++.++.+|++|||++.........
T Consensus 85 ~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 161 (287)
T cd06621 85 GGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG 161 (287)
T ss_pred CCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccccccc
Confidence 9999988753 346777789999999999999998 9999999999999999999999999997654322211
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccc--ccCC-CCchHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN--EVGS-SSSLQDEIK 920 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~ 920 (955)
.......|.+||......++.++||||+||++|||+||+.|+........... .......... .... .........
T Consensus 162 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd06621 162 TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPI-ELLSYIVNMPNPELKDEPGNGIKWSE 240 (287)
T ss_pred cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChH-HHHHHHhcCCchhhccCCCCCCchHH
Confidence 12233457788888888889999999999999999999999875422111111 1111111100 0000 010012345
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+.+++.+||+.+|++|||+.|+++.
T Consensus 241 ~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 241 EFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 67899999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=302.97 Aligned_cols=187 Identities=21% Similarity=0.272 Sum_probs=151.6
Q ss_pred hhhccCCCCCceEEEeCC---CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEc--CCeeEEEEeecCC
Q 002186 696 CEEAARPQSAAGCKAVLP---TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYDYLPN 770 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ey~~~ 770 (955)
..+||+|+||+||+|... +++.||||+++.... ...+.+|++++++++|||||++++++.. +...++||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence 468999999999999853 568899999875332 3456789999999999999999998864 457899999996
Q ss_pred CChhHHhhc-----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee----CCCCCceECcccccc
Q 002186 771 GNLSEKIRT-----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKY 835 (955)
Q Consensus 771 gsL~~~l~~-----------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl----~~~~~~ki~DfGl~~ 835 (955)
++|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 588887742 246677789999999999999998 99999999999999 456789999999987
Q ss_pred cccccCC-----CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCC
Q 002186 836 LTQLADG-----SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNA 887 (955)
Q Consensus 836 ~~~~~~~-----~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~ 887 (955)
....... ....++.+|.+||+..+ ..++.++||||+||++|||+||+.||..
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 6432211 11224556788898765 4578899999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=296.31 Aligned_cols=243 Identities=18% Similarity=0.240 Sum_probs=189.2
Q ss_pred hhhhccCCCCCceEEEeCC-CCc----EEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGI----TVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~----~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||+||+|... +|. .||+|.++.... ....+.+|++.+++++||||++++++|.. ...++||||
T Consensus 11 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 89 (279)
T cd05057 11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQL 89 (279)
T ss_pred EcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEec
Confidence 6788999999999999853 343 689998875432 34678889999999999999999999987 788999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
+++|+|.++++. ..++.....++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++.........
T Consensus 90 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 166 (279)
T cd05057 90 MPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEY 166 (279)
T ss_pred CCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccccCcccce
Confidence 999999999975 467889999999999999999997 99999999999999999999999999987654322211
Q ss_pred c----ccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 845 P----AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 845 ~----~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. .....|.+||......++.++|||||||++||++| |+.|+..... .. ....+........+. ...
T Consensus 167 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~-----~~~~~~~~~~~~~~~---~~~ 237 (279)
T cd05057 167 HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-VE-----IPDLLEKGERLPQPP---ICT 237 (279)
T ss_pred ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-HH-----HHHHHhCCCCCCCCC---CCC
Confidence 1 11223667887777788899999999999999999 8888764321 11 000111111011111 122
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
..+.+++.+||..||++||++.++++.|+++
T Consensus 238 ~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 238 IDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 4567888999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=300.84 Aligned_cols=247 Identities=18% Similarity=0.238 Sum_probs=184.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|.. .+++.||+|.++.... ....+.+|++.+++++||||+++++++..++..++||||++ +
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~ 88 (301)
T cd07873 10 KLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-K 88 (301)
T ss_pred EeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-c
Confidence 778899999999999985 4789999999875322 24456789999999999999999999999999999999997 6
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Ccc
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 846 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~ 846 (955)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......... ...
T Consensus 89 ~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 165 (301)
T cd07873 89 DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEV 165 (301)
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccc
Confidence 99988864 356788889999999999999998 9999999999999999999999999998654322211 112
Q ss_pred cccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc---------ccccccccccccccc-----C-
Q 002186 847 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---------PIDGLLGEMYNENEV-----G- 910 (955)
Q Consensus 847 ~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~---------~~~~~~~~~~~~~~~-----~- 910 (955)
....|.+||.... ..++.++||||+||++|||+||+.||......... +.............. +
T Consensus 166 ~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (301)
T cd07873 166 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPK 245 (301)
T ss_pred eeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCc
Confidence 3445777887654 45788899999999999999999998743211000 000000000000000 0
Q ss_pred -CCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 911 -SSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 911 -~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..... ......+.+++.+|++.||.+|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 246 YRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000 112345678999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=297.46 Aligned_cols=241 Identities=18% Similarity=0.177 Sum_probs=186.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..+.+|.|+||.||+|.. .+|+.||+|.+..... ..+.+.+|++.+++++||||+++++++..++..++||||+++|+
T Consensus 16 i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 95 (292)
T cd06644 16 IIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGA 95 (292)
T ss_pred hhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCc
Confidence 778899999999999996 4689999999875432 35667889999999999999999999999999999999999999
Q ss_pred hhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Cccc
Q 002186 773 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAK 847 (955)
Q Consensus 773 L~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~~ 847 (955)
|..++.+ ..++.....++.|+++|++|||+. +|+|||+||+||+++.++.+||+|||++......... ...+
T Consensus 96 l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 172 (292)
T cd06644 96 VDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIG 172 (292)
T ss_pred HHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecC
Confidence 9888754 468889999999999999999998 9999999999999999999999999987643222111 1123
Q ss_pred ccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 848 IAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 848 ~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...|.+||+.. ...++.++|||||||++|||+||+.|+....... ......... ............++
T Consensus 173 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~ 245 (292)
T cd06644 173 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKSE-PPTLSQPSKWSMEF 245 (292)
T ss_pred CccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH------HHHHHhcCC-CccCCCCcccCHHH
Confidence 34577788763 3346778999999999999999999886432111 000111110 00001111223457
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.+++.+||+.||++||+++|+++
T Consensus 246 ~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 246 RDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred HHHHHHHhcCCcccCcCHHHHhc
Confidence 78999999999999999999986
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=306.80 Aligned_cols=192 Identities=21% Similarity=0.276 Sum_probs=165.0
Q ss_pred cccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccC-C-----CCceeEeEEEEcCCeeEE
Q 002186 691 FNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-H-----KNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H-----~niv~l~g~~~~~~~~~l 763 (955)
+.|+..+.||+|.||.|.||. ..+++.||||+++....-..+...|+.+|..++ | -|+|++++|+..+++.||
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 345589999999999999999 468999999999977666777788999999987 4 389999999999999999
Q ss_pred EEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC--CCceECcccccccc
Q 002186 764 LYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN--MEPHLAEFGFKYLT 837 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~--~~~ki~DfGl~~~~ 837 (955)
|+|.+. -+|+++|+. .++......++.||+.||.+||.. +|||+||||+||||.+- ..+||+|||.+...
T Consensus 266 VfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 999996 599999986 457788889999999999999999 99999999999999743 46999999998764
Q ss_pred cccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCC
Q 002186 838 QLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 887 (955)
Q Consensus 838 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~ 887 (955)
...-- .-....+|.+||++-+.+|+.+.||||||||+.||+||.+.|.+
T Consensus 342 ~q~vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 342 SQRVY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred CCcce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 33211 22256789999999999999999999999999999999766653
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=300.59 Aligned_cols=242 Identities=16% Similarity=0.245 Sum_probs=190.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
....||+|+||.||+|.. .+|+.||||.++... ...+.+.+|+..+++++||||+++++++..++..++||||+++|+
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 455799999999999985 479999999986533 235567889999999999999999999999999999999999999
Q ss_pred hhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccccc
Q 002186 773 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIA 849 (955)
Q Consensus 773 L~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~~ 849 (955)
|.+++.. ..++.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........ ....+..
T Consensus 105 L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 181 (297)
T cd06659 105 LTDIVSQTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTP 181 (297)
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCc
Confidence 9998865 568889999999999999999998 999999999999999999999999999864432211 1122445
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
.|.+||+.....++.++|||||||++|||++|+.||........ .........+. . .........+.+++.+|
T Consensus 182 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~---~~~~~~~~~~~-~---~~~~~~~~~l~~~i~~~ 254 (297)
T cd06659 182 YWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA---MKRLRDSPPPK-L---KNAHKISPVLRDFLERM 254 (297)
T ss_pred cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHhccCCCC-c---cccCCCCHHHHHHHHHH
Confidence 57888988888889999999999999999999999864322110 00000000000 0 00111234567888899
Q ss_pred cCCCCCCCCCHHHHHHH
Q 002186 930 TRSTPSDRPSMEEALKL 946 (955)
Q Consensus 930 l~~dp~~RPt~~ev~~~ 946 (955)
++.+|++||+++|+++.
T Consensus 255 l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 255 LTREPQERATAQELLDH 271 (297)
T ss_pred hcCCcccCcCHHHHhhC
Confidence 99999999999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=298.86 Aligned_cols=246 Identities=17% Similarity=0.187 Sum_probs=187.3
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcC-----Ce
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR-----HQ 760 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~-----~~ 760 (955)
.++|. ..+.+|+|+||.||+|.. .+|+.+|+|.+.........+.+|+.++.++ +||||++++++|... +.
T Consensus 21 ~~~y~--~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~ 98 (291)
T cd06639 21 TDTWE--IIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQ 98 (291)
T ss_pred CCCeE--EEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCe
Confidence 44566 778899999999999986 5789999999875444456677889999988 799999999998753 35
Q ss_pred eEEEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~ 834 (955)
.++||||+++|+|.++++. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~kl~dfg~~ 175 (291)
T cd06639 99 LWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVS 175 (291)
T ss_pred eEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEeecccc
Confidence 8999999999999998852 457888899999999999999998 9999999999999999999999999998
Q ss_pred ccccccCC--CCcccccccCchhhhhcc-----CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccc
Q 002186 835 YLTQLADG--SFPAKIAWTESGEFYNAM-----KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN 907 (955)
Q Consensus 835 ~~~~~~~~--~~~~~~~~~~~~e~~~~~-----~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (955)
+....... ....+...|.+||..... .++.++|||||||++|||+||+.|+........ ..+.....
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~------~~~~~~~~ 249 (291)
T cd06639 176 AQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT------LFKIPRNP 249 (291)
T ss_pred hhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH------HHHHhcCC
Confidence 65432211 112233446778876432 357899999999999999999999864321110 00110000
Q ss_pred ccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 908 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
........+....+.+++.+||+.||++||+++|+++
T Consensus 250 -~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 250 -PPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred -CCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0000111223345788999999999999999999975
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=300.23 Aligned_cols=242 Identities=17% Similarity=0.269 Sum_probs=189.6
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
....||+|+||.||++.. .+|..||||+++... ...+.+.+|+..+++++||||+++++++...+..++||||+++++
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 105 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA 105 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence 345699999999999985 478999999986533 335568899999999999999999999999999999999999999
Q ss_pred hhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Cccccc
Q 002186 773 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKIA 849 (955)
Q Consensus 773 L~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~~~~ 849 (955)
|.+++.. ..++.+...++.|++.|++|||+. +|+||||||+||+++.++.+|++|||++......... ...+..
T Consensus 106 L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 182 (292)
T cd06658 106 LTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTP 182 (292)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCc
Confidence 9998865 568888999999999999999998 9999999999999999999999999998644322111 112345
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
.|.+||+.....++.++|||||||++|||++|+.|+........ . ........+. . .........+.+++.+|
T Consensus 183 ~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~-~~~~~~~~~~-~---~~~~~~~~~~~~li~~~ 255 (292)
T cd06658 183 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA--M-RRIRDNLPPR-V---KDSHKVSSVLRGFLDLM 255 (292)
T ss_pred cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--H-HHHHhcCCCc-c---ccccccCHHHHHHHHHH
Confidence 57888988877889999999999999999999999864332110 0 0111111111 1 11111233466788889
Q ss_pred cCCCCCCCCCHHHHHHH
Q 002186 930 TRSTPSDRPSMEEALKL 946 (955)
Q Consensus 930 l~~dp~~RPt~~ev~~~ 946 (955)
+..||++|||++|+++.
T Consensus 256 l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 256 LVREPSQRATAQELLQH 272 (292)
T ss_pred ccCChhHCcCHHHHhhC
Confidence 99999999999999964
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=294.80 Aligned_cols=242 Identities=18% Similarity=0.204 Sum_probs=187.6
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..+.+|.|++|.||+|.. .++..||+|.++.... ..+.+.+|++++++++||||+++++++.+++..++||||+++|+
T Consensus 9 i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (280)
T cd06611 9 IIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGA 88 (280)
T ss_pred HHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCc
Confidence 788899999999999996 4789999999875432 35578889999999999999999999999999999999999999
Q ss_pred hhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Cccc
Q 002186 773 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAK 847 (955)
Q Consensus 773 L~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~~ 847 (955)
|.+++.. .+++.....++.|++.|+.|||+. +|+||||||+||+++.++.+|++|||++......... ...+
T Consensus 89 L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 165 (280)
T cd06611 89 LDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIG 165 (280)
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeec
Confidence 9999865 467888899999999999999998 9999999999999999999999999987643322111 1123
Q ss_pred ccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 848 IAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 848 ~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...|.+||... ...++.++|||||||++|||++|+.|+....... ......... .............+
T Consensus 166 ~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~ 238 (280)
T cd06611 166 TPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR------VLLKILKSE-PPTLDQPSKWSSSF 238 (280)
T ss_pred chhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH------HHHHHhcCC-CCCcCCcccCCHHH
Confidence 44466777653 3446778999999999999999999986432111 001111110 00001111223456
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+++.+||+.||++||+++++++.
T Consensus 239 ~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 239 NDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHHHHHHhccChhhCcCHHHHhcC
Confidence 788999999999999999999864
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-32 Score=293.65 Aligned_cols=241 Identities=20% Similarity=0.237 Sum_probs=192.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
....+|.|++|.||+|+. .+|+.||+|.+.... .....+.+|++++++++||||+++++++.++...++|+||+++|
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (274)
T cd06609 5 LLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGG 84 (274)
T ss_pred hhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCC
Confidence 678899999999999995 478999999987543 23456788999999999999999999999999999999999999
Q ss_pred ChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcccc
Q 002186 772 NLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 848 (955)
Q Consensus 772 sL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~ 848 (955)
+|.++++. ..++.....++.|++.|+.|||+. +|+||||||+||+++.++.++++|||+++....... ....+.
T Consensus 85 ~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 161 (274)
T cd06609 85 SCLDLLKPGKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGT 161 (274)
T ss_pred cHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCC
Confidence 99999987 568899999999999999999998 999999999999999999999999999876543211 112234
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..|.+||+..+..++.++|||||||++|||+||+.|+........ . ........+. . +. ......+.+++.+
T Consensus 162 ~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~--~-~~~~~~~~~~-~---~~-~~~~~~~~~~l~~ 233 (274)
T cd06609 162 PFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV--L-FLIPKNNPPS-L---EG-NKFSKPFKDFVSL 233 (274)
T ss_pred ccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH--H-HHhhhcCCCC-C---cc-cccCHHHHHHHHH
Confidence 457888988888899999999999999999999999864321110 0 0000000010 0 00 0133457788999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 002186 929 CTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~ 946 (955)
||..||++|||++|++++
T Consensus 234 ~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 234 CLNKDPKERPSAKELLKH 251 (274)
T ss_pred HhhCChhhCcCHHHHhhC
Confidence 999999999999999863
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=296.19 Aligned_cols=247 Identities=20% Similarity=0.242 Sum_probs=184.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|++|.||+|+. .+|+.||||+++... ...+.+.+|+.++.+++||||+++++++.+++..++||||++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~- 82 (285)
T cd07861 4 KIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS- 82 (285)
T ss_pred EeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-
Confidence 667899999999999995 479999999986532 224567889999999999999999999999999999999997
Q ss_pred CChhHHhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 771 GNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 771 gsL~~~l~~-----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (285)
T cd07861 83 MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT 159 (285)
T ss_pred CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence 689888753 357888889999999999999998 9999999999999999999999999998654322111
Q ss_pred CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------cccccccccccccc
Q 002186 844 FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLGEMYNEN 907 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~~~~~~~ 907 (955)
...+...+.+||.... ..++.++|||||||++|||+||+.|+........ |.............
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (285)
T cd07861 160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF 239 (285)
T ss_pred CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc
Confidence 1122445778887654 4568899999999999999999988864321100 00000000000000
Q ss_pred ccCCCCc----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 908 EVGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 908 ~~~~~~~----~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+...... ......++.+++.+||+.||++|||++||++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000 0112345678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=304.83 Aligned_cols=245 Identities=22% Similarity=0.265 Sum_probs=188.8
Q ss_pred hhhhccCCCCCceEEEeCC--------CCcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 695 ECEEAARPQSAAGCKAVLP--------TGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~--------~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
..+.||+|+||.||+|... ++..||+|.++... ...+.+.+|+++++++ +||||++++++|.+.+..++
T Consensus 16 i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (334)
T cd05100 16 LGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 95 (334)
T ss_pred ecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEE
Confidence 6788999999999999731 23479999887532 2356788899999999 79999999999999999999
Q ss_pred EEeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC
Q 002186 764 LYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~ 825 (955)
||||+++|+|.+++.. ..+|.++..++.|+++||+|||.. +|+||||||+||+++.++.
T Consensus 96 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~~~~~ 172 (334)
T cd05100 96 LVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVTEDNV 172 (334)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCc
Confidence 9999999999999864 256888899999999999999998 9999999999999999999
Q ss_pred ceECcccccccccccCCC--Cc--ccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccc
Q 002186 826 PHLAEFGFKYLTQLADGS--FP--AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 900 (955)
Q Consensus 826 ~ki~DfGl~~~~~~~~~~--~~--~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 900 (955)
+||+|||+++........ .. .....|.+||......++.++|||||||++|||++ |..|+.... ... ..
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~-----~~ 246 (334)
T cd05100 173 MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-VEE-----LF 246 (334)
T ss_pred EEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-HHH-----HH
Confidence 999999998754322111 11 11234678888888888999999999999999999 666664321 111 00
Q ss_pred cccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 901 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
..+...... +........+.+++.+||+.+|++||||.|+++.|+.+.
T Consensus 247 ~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 247 KLLKEGHRM---DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHHHcCCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 011111000 011122346778999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-33 Score=312.22 Aligned_cols=191 Identities=14% Similarity=0.133 Sum_probs=163.2
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++.+++|||||++++++.+.+..++||||++
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~ 84 (360)
T cd05627 5 SLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLP 84 (360)
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCC
Confidence 678899999999999985 579999999997532 224567789999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-----
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----- 842 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~----- 842 (955)
+|+|.+++.+ ..+......++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~ 161 (360)
T cd05627 85 GGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYR 161 (360)
T ss_pred CccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccccccccccc
Confidence 9999999875 457777888999999999999998 999999999999999999999999999764321100
Q ss_pred --------------------------------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCC
Q 002186 843 --------------------------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 888 (955)
Q Consensus 843 --------------------------------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~ 888 (955)
....++..|.+||+..+..++.++|||||||++|||+||+.||...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~ 239 (360)
T cd05627 162 NLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (360)
T ss_pred ccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCC
Confidence 0112456688999988888999999999999999999999998743
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=295.42 Aligned_cols=247 Identities=21% Similarity=0.288 Sum_probs=187.1
Q ss_pred cchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-----------hHHHHHHHHHHHhccCCCCceeEeEEEEcCCe
Q 002186 693 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-----------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 693 ~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-----------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 760 (955)
+...+.+|.|++|.||+|.. .+|+.||||.++.... ..+.+.+|++.+++++||||+++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 33677899999999999985 4799999998864211 12456789999999999999999999999999
Q ss_pred eEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
.++||||+++|+|.+++++ ..++..+..++.|++.|+.|||+. +++||||||+||+++.++.+|++|||+++...
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred eEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 9999999999999999976 457788888999999999999998 99999999999999999999999999986543
Q ss_pred ccCCC----CcccccccCchhhhhccC--CcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCC
Q 002186 839 LADGS----FPAKIAWTESGEFYNAMK--EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 839 ~~~~~----~~~~~~~~~~~e~~~~~~--~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
..... ...+...|.+||...... ++.++||||+||++||+++|+.|+......... . .......... .. .
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~-~~~~~~~~~~-~~-~ 235 (272)
T cd06629 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAM-F-KLGNKRSAPP-IP-P 235 (272)
T ss_pred ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHH-H-HhhccccCCc-CC-c
Confidence 22111 111233466788776543 788999999999999999999998633221100 0 0000000000 00 0
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+....+.+++.+||..||++|||++||+++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 236 DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 1112234567788999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=292.86 Aligned_cols=239 Identities=18% Similarity=0.232 Sum_probs=182.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc------chHHHHHHHHHHHhccCCCCceeEeEEEEc--CCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA------TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ 765 (955)
..+.+|+|+||.||+|.. .+|..||+|+++... ...+.+.+|++++++++||||+++++++.+ .+..++||
T Consensus 6 ~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~ 85 (266)
T cd06651 6 RGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFM 85 (266)
T ss_pred ccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEE
Confidence 778899999999999985 478999999986432 123467889999999999999999999875 36789999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC--
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 841 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~-- 841 (955)
||+++++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 86 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd06651 86 EYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS 162 (266)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc
Confidence 99999999999875 457888889999999999999988 99999999999999999999999999986543211
Q ss_pred -C--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 842 -G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 842 -~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
. ....+...|.+||+.....++.++|||||||++|||+||+.||........ ..........+ ......
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~--~~~~~~~~~~~------~~~~~~ 234 (266)
T cd06651 163 GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA--IFKIATQPTNP------QLPSHI 234 (266)
T ss_pred CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH--HHHHhcCCCCC------CCchhc
Confidence 0 111234457788988887888999999999999999999999864321110 00000000000 001111
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...+.+++ +||..+|++||+|+||++
T Consensus 235 ~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 235 SEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 23333444 788899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-32 Score=290.64 Aligned_cols=243 Identities=17% Similarity=0.212 Sum_probs=190.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..+.+|+|++|.||+|.. .+++.+|+|.+..... ..+.+.+|++++++++||||++++|++...+..++||||+++++
T Consensus 7 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~ 86 (262)
T cd06613 7 LIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGS 86 (262)
T ss_pred EEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCc
Confidence 667899999999999986 4688999999875432 45678899999999999999999999999999999999999999
Q ss_pred hhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Cccc
Q 002186 773 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAK 847 (955)
Q Consensus 773 L~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~~ 847 (955)
|.+++.. .++..+...++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......... ...+
T Consensus 87 l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 163 (262)
T cd06613 87 LQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIG 163 (262)
T ss_pred HHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccC
Confidence 9998864 457788889999999999999998 9999999999999999999999999998654322111 1123
Q ss_pred ccccCchhhhhcc---CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 848 IAWTESGEFYNAM---KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 848 ~~~~~~~e~~~~~---~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..+|.+||..... .++.++|||||||++|||+||+.|+........ ........+.+. ...........+.+
T Consensus 164 ~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~ 238 (262)
T cd06613 164 TPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA--LFLISKSNFPPP---KLKDKEKWSPVFHD 238 (262)
T ss_pred CccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCCCc---cccchhhhhHHHHH
Confidence 4457788887665 788899999999999999999999864321110 000000100111 01112233456889
Q ss_pred HHHHccCCCCCCCCCHHHHHH
Q 002186 925 VALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
++.+||..||.+|||++||++
T Consensus 239 li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 239 FIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHcCCChhhCCCHHHHhc
Confidence 999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=293.41 Aligned_cols=239 Identities=18% Similarity=0.262 Sum_probs=186.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----------hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
....||.|++|.||+|.. .+++.||+|.+..... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 4 ~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (267)
T cd06628 4 KGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNI 83 (267)
T ss_pred ccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEE
Confidence 557899999999999985 4688999998864211 12457889999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+++++|.+++.. ..++.....++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 84 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06628 84 FLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKKLEANS 160 (267)
T ss_pred EEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence 9999999999999976 457778889999999999999998 99999999999999999999999999987554211
Q ss_pred CC--------CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 842 GS--------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 842 ~~--------~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
.. ...+...|.+||......++.++||||+||++|||+||+.||........ ... ......+ .
T Consensus 161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~-~~~~~~~------~ 231 (267)
T cd06628 161 LSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA--IFK-IGENASP------E 231 (267)
T ss_pred ccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH--HHH-HhccCCC------c
Confidence 00 01123346788888777788899999999999999999999874322110 000 0011011 1
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
........+.+++.+||+.||++||++.|+++
T Consensus 232 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 232 IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11123355778889999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=291.27 Aligned_cols=240 Identities=19% Similarity=0.247 Sum_probs=187.7
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc------chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|++|.||+|+.. +|..||+|.+.... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 4 ~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 83 (258)
T cd06632 4 KGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLEL 83 (258)
T ss_pred ccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEe
Confidence 5678999999999999976 89999999986532 1345688899999999999999999999999999999999
Q ss_pred cCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC-CCC
Q 002186 768 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-GSF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~-~~~ 844 (955)
+++++|.+++.+ ..++.....++.|+++|++|||+. +|+|+||||+||+++.++.+||+|||++....... ...
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 160 (258)
T cd06632 84 VPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS 160 (258)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccccccccc
Confidence 999999999975 357888889999999999999998 99999999999999999999999999986543322 111
Q ss_pred cccccccCchhhhhccC-CcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMK-EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~-~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
..+...+.+||...... ++.++|||||||++|||++|+.||........ .. . .... .. . ..........+.
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~-~~-~-~~~~--~~-~--~~~~~~~~~~~~ 232 (258)
T cd06632 161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA-VF-K-IGRS--KE-L--PPIPDHLSDEAK 232 (258)
T ss_pred cCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH-HH-H-HHhc--cc-C--CCcCCCcCHHHH
Confidence 12344467778776555 88899999999999999999999864331110 00 0 0000 00 0 011112235567
Q ss_pred HHHHHccCCCCCCCCCHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+++.+||+.+|++||+++|+++
T Consensus 233 ~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 233 DFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHHHHHhhcCcccCcCHHHHhc
Confidence 8889999999999999999975
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=301.18 Aligned_cols=188 Identities=21% Similarity=0.276 Sum_probs=151.4
Q ss_pred hhhhccCCCCCceEEEeCC---CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEc--CCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLP---TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ey~~ 769 (955)
+..+||+|+||.||+|+.. ++..||+|.++.... ...+.+|++++++++|||||++++++.. +...++||||++
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 3467999999999999854 567899999874332 3456789999999999999999999854 567899999997
Q ss_pred CCChhHHhhc-----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee----CCCCCceECccccc
Q 002186 770 NGNLSEKIRT-----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFK 834 (955)
Q Consensus 770 ~gsL~~~l~~-----------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl----~~~~~~ki~DfGl~ 834 (955)
++|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 578777642 246777889999999999999998 99999999999999 56678999999998
Q ss_pred ccccccCC-----CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCC
Q 002186 835 YLTQLADG-----SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNA 887 (955)
Q Consensus 835 ~~~~~~~~-----~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~ 887 (955)
+....... ....++..|.+||+..+ ..++.++|||||||++|||+||+.||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 76533211 11123455788887765 4578899999999999999999999863
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-32 Score=288.01 Aligned_cols=238 Identities=19% Similarity=0.174 Sum_probs=191.8
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|+|.|++|-.|+ .-+|..||||++.+... ....+.+|++-|+-++|||||+++.+..+....|||.|.=.+
T Consensus 22 LekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~ 101 (864)
T KOG4717|consen 22 LEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDG 101 (864)
T ss_pred hhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCC
Confidence 66789999999998887 56999999999976533 355667889999999999999999999988999999999999
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-CCCCceECcccccccccccCCC-Cc
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADGS-FP 845 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~DfGl~~~~~~~~~~-~~ 845 (955)
|+|+|+|.+ .+...-..+++.||..|+.|+|+. .+||||+||+||.+. .-|-+|+.|||++-.+.....- ..
T Consensus 102 GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~Ts 178 (864)
T KOG4717|consen 102 GDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTS 178 (864)
T ss_pred chHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcc
Confidence 999999976 456667788999999999999999 899999999999765 5688999999998665544321 22
Q ss_pred ccccccCchhhhhccCCc-ccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 846 AKIAWTESGEFYNAMKEE-MYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~~~~-~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
++...|.+||+..+..|+ +++||||+|||||-++.|+.||....+-+ .+..+.|... ..+.-...+|.+
T Consensus 179 CGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE------TLTmImDCKY----tvPshvS~eCrd 248 (864)
T KOG4717|consen 179 CGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE------TLTMIMDCKY----TVPSHVSKECRD 248 (864)
T ss_pred cchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh------hhhhhhcccc----cCchhhhHHHHH
Confidence 233347888988877665 45899999999999999999998654322 2223333321 122334577899
Q ss_pred HHHHccCCCCCCCCCHHHHHH
Q 002186 925 VALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
++..|+..||++|.+.+||+.
T Consensus 249 LI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 249 LIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred HHHHHHhcCchhhccHHHHhc
Confidence 999999999999999999985
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.6e-33 Score=295.64 Aligned_cols=241 Identities=18% Similarity=0.184 Sum_probs=188.4
Q ss_pred cchhhhccCCCCCceEEEeCCCCcEEEEEEeecc---cchHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeec
Q 002186 693 STECEEAARPQSAAGCKAVLPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 693 ~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
|+..+.||+||.+.|||+...+.+.+|+|++... ......+..||+.|.+++ |.+||++++|-..++..||||||=
T Consensus 363 Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G 442 (677)
T KOG0596|consen 363 YEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG 442 (677)
T ss_pred hhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc
Confidence 3488999999999999999988889999988642 334678999999999996 999999999999999999999975
Q ss_pred CCCChhHHhhcCC----CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 769 PNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 769 ~~gsL~~~l~~~~----~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
.-||.++|+++. +| .+..|..||+.|+.++|.+ +|||.||||.|.|+- .|.+|++|||+|.....+...
T Consensus 443 -d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI 516 (677)
T KOG0596|consen 443 -DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSI 516 (677)
T ss_pred -cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhcccCccccce
Confidence 469999998732 45 5667889999999999999 999999999999884 578999999999887655432
Q ss_pred ---CcccccccCchhhhhcc-----------CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccc-
Q 002186 844 ---FPAKIAWTESGEFYNAM-----------KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE- 908 (955)
Q Consensus 844 ---~~~~~~~~~~~e~~~~~-----------~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 908 (955)
...++..|++||....+ +.++++||||+|||+|+|+.|+.||..-... ...+..+.++..
T Consensus 517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~-----~aKl~aI~~P~~~ 591 (677)
T KOG0596|consen 517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ-----IAKLHAITDPNHE 591 (677)
T ss_pred eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH-----HHHHHhhcCCCcc
Confidence 23466668888866432 3567899999999999999999998632211 112233334321
Q ss_pred cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 909 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+..+.... ..+++++|..||+.||++|||+.|++++
T Consensus 592 Iefp~~~~--~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 592 IEFPDIPE--NDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ccccCCCC--chHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 11111111 1238899999999999999999999863
|
|
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-32 Score=318.52 Aligned_cols=249 Identities=15% Similarity=0.131 Sum_probs=181.2
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCC------CCceeEeEEEEcC-Cee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRH------KNLIRLLGFCYNR-HQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H------~niv~l~g~~~~~-~~~ 761 (955)
.|. ..+.||+|+||+||+|.. .+++.||||+++......+....|++++++++| ++++++++++..+ +..
T Consensus 130 ~y~--i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 130 RFK--ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred cEE--EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 455 778999999999999985 578899999997543334455667777766654 4589999988764 578
Q ss_pred EEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeeeCCCC--------------
Q 002186 762 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENM-------------- 824 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl~~~~-------------- 824 (955)
++||||+ +++|.+++.+ .+++.....|+.|++.||+|||+ . +||||||||+|||++.++
T Consensus 208 ~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~ 283 (467)
T PTZ00284 208 CIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDPVTNRALPPD 283 (467)
T ss_pred EEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcccccccccccCCC
Confidence 9999998 6789998865 46788889999999999999997 5 899999999999998765
Q ss_pred --CceECcccccccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc-cccccc
Q 002186 825 --EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-IDGLLG 901 (955)
Q Consensus 825 --~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~-~~~~~~ 901 (955)
.+||+|||.+....... ....++.+|.+||+..+..++.++|||||||++|||+||+.||.......... +.....
T Consensus 284 ~~~vkl~DfG~~~~~~~~~-~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g 362 (467)
T PTZ00284 284 PCRVRICDLGGCCDERHSR-TAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLG 362 (467)
T ss_pred CceEEECCCCccccCcccc-ccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC
Confidence 49999999875432211 12235567889999988889999999999999999999999997433211000 000000
Q ss_pred ----------------cccccc----ccCCC---------CchHH--HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 902 ----------------EMYNEN----EVGSS---------SSLQD--EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 902 ----------------~~~~~~----~~~~~---------~~~~~--~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.+++.. +.... ....+ ....+.+++.+||+.||++|||++|+++
T Consensus 363 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 363 RLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred CCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 000000 00000 00000 1234679999999999999999999986
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.7e-35 Score=312.56 Aligned_cols=388 Identities=27% Similarity=0.402 Sum_probs=233.5
Q ss_pred CCCCCEEEccCCcCC-ccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEE
Q 002186 124 LTSLISLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (955)
Q Consensus 124 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 202 (955)
|+-.+-.|+++|.|+ +.+|.....++.++.|.|....+. .+|+.++.|.+|++|.+++|++. .+-..+..|+.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 344455566666666 345555555555555555555544 45555555555555555555554 222334444555555
Q ss_pred EccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccccc
Q 002186 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (955)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 282 (955)
++..|++.. ..+|..+..|..|..||||+|++. ..|..+..-.++-.|+|++|+|.
T Consensus 84 ~~R~N~LKn-----------------------sGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie 139 (1255)
T KOG0444|consen 84 IVRDNNLKN-----------------------SGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE 139 (1255)
T ss_pred hhhcccccc-----------------------CCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc
Confidence 555544421 124555555555555666666555 45555555555556666666665
Q ss_pred ccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCc-ccCCccc
Q 002186 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS-GSLPENL 361 (955)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~ 361 (955)
.+....|.+++.|-.||||+|++. ..|+.+..+..|+.|.|++|.+.-.--..+..+++|+.|.+++.+-+ ..+|.++
T Consensus 140 tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsl 218 (1255)
T KOG0444|consen 140 TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSL 218 (1255)
T ss_pred cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCch
Confidence 443344555566666666666665 34445555666666666666554322223334455555555543322 2355555
Q ss_pred CCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCE
Q 002186 362 GRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINY 441 (955)
Q Consensus 362 ~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 441 (955)
..+.+|+.+|+|.|++. .+|..+-++.+|+.|+||+|+|+ .+....+...+|++
T Consensus 219 d~l~NL~dvDlS~N~Lp-------------------------~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEt 272 (1255)
T KOG0444|consen 219 DDLHNLRDVDLSENNLP-------------------------IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLET 272 (1255)
T ss_pred hhhhhhhhccccccCCC-------------------------cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhh
Confidence 55556666666666554 33445556667777777777776 33334455667778
Q ss_pred EECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceEecccccc
Q 002186 442 IDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNL 521 (955)
Q Consensus 442 L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l 521 (955)
|+||.|+++ .+|..++.+++|+.|.+.+|..-...+|+.++.+..|+.+..++|.+.
T Consensus 273 LNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE---------------------- 329 (1255)
T KOG0444|consen 273 LNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE---------------------- 329 (1255)
T ss_pred hccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc----------------------
Confidence 888888877 677788888888888887775444456666666666666555554432
Q ss_pred ccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCC
Q 002186 522 SGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSF 590 (955)
Q Consensus 522 ~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 590 (955)
.+|+.+..|..|+.|.|++|++. .+|+.+--++.|+.|||..|.-.--.|..-..-++|+.-++..
T Consensus 330 --lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP~da~~~lefYNIDF 395 (1255)
T KOG0444|consen 330 --LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKPNDARKKLEFYNIDF 395 (1255)
T ss_pred --cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCCcchhhhcceeeecce
Confidence 67899999999999999999987 7899999999999999999976655555444445666655543
|
|
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-32 Score=298.40 Aligned_cols=247 Identities=19% Similarity=0.249 Sum_probs=185.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|+|++|.||+|+. .+|+.||+|+++.... ....+.+|++++++++||||+++++++.+.+..++|+||++
T Consensus 4 ~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~- 82 (284)
T cd07839 4 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD- 82 (284)
T ss_pred eEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-
Confidence 567899999999999995 5799999999875322 23456789999999999999999999999999999999997
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC--c
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF--P 845 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~--~ 845 (955)
|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......... .
T Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (284)
T cd07839 83 QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAE 159 (284)
T ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCC
Confidence 588887753 468888899999999999999998 99999999999999999999999999987543322111 1
Q ss_pred ccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc----------c---ccccccccccc--
Q 002186 846 AKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------G---LLGEMYNENEV-- 909 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~----------~---~~~~~~~~~~~-- 909 (955)
.....|.+||...+. .++.++|||||||++|||+||+.|+..+......... . ...+..+....
T Consensus 160 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07839 160 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPM 239 (284)
T ss_pred ccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCC
Confidence 134457788877553 4688999999999999999999997643321110000 0 00000000000
Q ss_pred -CCCC----chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 910 -GSSS----SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 910 -~~~~----~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.... ..+....++.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 240 YPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000 00123456778999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-32 Score=302.33 Aligned_cols=191 Identities=16% Similarity=0.100 Sum_probs=161.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||++.. .+|+.||||.+.... ...+.+.+|+.++..++||||+++++++.+++..|+||||++
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (331)
T cd05597 5 ILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYV 84 (331)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCC
Confidence 678899999999999995 579999999997422 234567889999999999999999999999999999999999
Q ss_pred CCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC---
Q 002186 770 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 843 (955)
Q Consensus 770 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--- 843 (955)
+|+|.+++.+ ..+......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 85 g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (331)
T cd05597 85 GGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSN 161 (331)
T ss_pred CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcccc
Confidence 9999999964 457778888999999999999999 9999999999999999999999999998654322211
Q ss_pred CcccccccCchhhhhc-----cCCcccccchhHHHHHHHHHhCCCCCCCC
Q 002186 844 FPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAG 888 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~-----~~~~~~~DV~S~Gvvl~Elltg~~p~~~~ 888 (955)
...++..|++||+... ..++.++|||||||++|||++|+.||...
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 162 VAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred ceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 1224556788888753 35678899999999999999999998743
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.4e-32 Score=291.50 Aligned_cols=243 Identities=19% Similarity=0.213 Sum_probs=185.2
Q ss_pred hhhhccCCCCCceEEEeCCC--CcEEEEEEeeccc-----------chHHHHHHHHHHHhc-cCCCCceeEeEEEEcCCe
Q 002186 695 ECEEAARPQSAAGCKAVLPT--GITVSVKKIEWGA-----------TRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~--g~~vAvK~~~~~~-----------~~~~~~~~e~~~l~~-l~H~niv~l~g~~~~~~~ 760 (955)
..+.||+|+||.||+|.... ++.+|||.+.... .....+.+|++++.+ ++||||++++++|.+++.
T Consensus 4 ~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 83 (269)
T cd08528 4 VLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDR 83 (269)
T ss_pred hhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCe
Confidence 67889999999999999654 7889999885321 112345667777764 799999999999999999
Q ss_pred eEEEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeeeCCCCCceECcccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl 833 (955)
.++||||+++++|.+++.. ..++...+.++.|++.|+.|||+ . +|+||||||+||+++.++.+|++|||.
T Consensus 84 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 84 LYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred EEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999988742 35677889999999999999996 4 799999999999999999999999999
Q ss_pred cccccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCC
Q 002186 834 KYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 834 ~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
+........ ....+...|.+||......++.++|||||||++|||++|+.|+....... ..............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~ 234 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS------LATKIVEAVYEPLP 234 (269)
T ss_pred eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH------HHHHHhhccCCcCC
Confidence 876443221 11123334678888887778999999999999999999999886432110 00011111100000
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
. ......+.+++.+||+.||++||++.||.++++
T Consensus 235 ~--~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 235 E--GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred c--ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 0 112345778889999999999999999999886
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.8e-32 Score=292.53 Aligned_cols=246 Identities=21% Similarity=0.217 Sum_probs=191.4
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|++|.||+|... +++.||+|.+.... ...+.+.+|++.+++++||||+++++++...+..++|+||++++
T Consensus 5 ~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (265)
T cd06605 5 YLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGG 84 (265)
T ss_pred HHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCC
Confidence 6788999999999999965 78999999987643 33556788999999999999999999999999999999999999
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccc
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 847 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~ 847 (955)
+|.+++.. ..+.....+++.|+++|++|+|+ . +++||||||+||+++.++.+||+|||.+............+
T Consensus 85 ~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (265)
T cd06605 85 SLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVG 161 (265)
T ss_pred cHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccC
Confidence 99999974 45677788999999999999998 7 99999999999999999999999999976543221111223
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
...|.+||+..+..++.++|||||||++|||+||+.|+.......... ................. ......+.+++.
T Consensus 162 ~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~li~ 238 (265)
T cd06605 162 TSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGI-FELLQYIVNEPPPRLPS--GKFSPDFQDFVN 238 (265)
T ss_pred ChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccH-HHHHHHHhcCCCCCCCh--hhcCHHHHHHHH
Confidence 334678898888888999999999999999999999987432111111 01111111111111011 113456788999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 002186 928 LCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~ 946 (955)
+||..||++|||+.|++++
T Consensus 239 ~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 239 LCLIKDPRERPSYKELLEH 257 (265)
T ss_pred HHcCCCchhCcCHHHHhhC
Confidence 9999999999999999863
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.1e-32 Score=297.03 Aligned_cols=248 Identities=21% Similarity=0.241 Sum_probs=186.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc------hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|++|.||+|.. .+|+.||||+++.... ....+..|++.+++++||||+++++++.+.+..++||||
T Consensus 4 ~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 83 (298)
T cd07841 4 KGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEF 83 (298)
T ss_pred eeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEcc
Confidence 567899999999999995 4799999999975432 134567889999999999999999999999999999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
+ +|+|.++++. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 84 ~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~ 159 (298)
T cd07841 84 M-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM 159 (298)
T ss_pred c-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccc
Confidence 9 8999999976 368889999999999999999998 99999999999999999999999999987654322111
Q ss_pred --cccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc---------------cccccccccccc
Q 002186 845 --PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---------------PIDGLLGEMYNE 906 (955)
Q Consensus 845 --~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~---------------~~~~~~~~~~~~ 906 (955)
......|.+||...+ ..++.++|||||||++|||++|..|+......... +...........
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T cd07841 160 THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEF 239 (298)
T ss_pred cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccc
Confidence 112344677887643 45788899999999999999997666532221100 000000000000
Q ss_pred cc---cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 907 NE---VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 907 ~~---~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.. .............+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 240 KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00 00000011234567899999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-32 Score=291.20 Aligned_cols=240 Identities=16% Similarity=0.193 Sum_probs=190.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|+|+||.+|++.. .+|+.||+|++... ....+.+.+|++.+++++||||+++++++...+..++||||+++
T Consensus 4 ~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd08218 4 KVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEG 83 (256)
T ss_pred EEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCC
Confidence 678899999999999985 47899999998643 22345788999999999999999999999999999999999999
Q ss_pred CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--C
Q 002186 771 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--F 844 (955)
Q Consensus 771 gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~ 844 (955)
++|.+++.. ..++.+...++.|++.|++|||+. +++|+||+|+||+++.++.+|++|||++......... .
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08218 84 GDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART 160 (256)
T ss_pred CcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence 999999865 357888899999999999999998 9999999999999999999999999998654332111 1
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..+...+.+||+..+...+.++|||||||++|||+||+.|+...... .......... . .+........+.+
T Consensus 161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~~~~~-~--~~~~~~~~~~~~~ 231 (256)
T cd08218 161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK------NLVLKIIRGS-Y--PPVSSHYSYDLRN 231 (256)
T ss_pred ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH------HHHHHHhcCC-C--CCCcccCCHHHHH
Confidence 11334477889888888889999999999999999999998643211 0111111111 0 0111123345778
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 002186 925 VALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
++.+||+.+|++||+|+||+++
T Consensus 232 li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 232 LVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHHHHhhCChhhCcCHHHHhhC
Confidence 9999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.8e-32 Score=292.58 Aligned_cols=240 Identities=19% Similarity=0.234 Sum_probs=190.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|.. .+|..||||.+.... ...+.+.+|++.+++++||||+++++++..++..++||||+++|
T Consensus 8 ~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 87 (277)
T cd06641 8 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG 87 (277)
T ss_pred hheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCC
Confidence 677899999999999985 578999999986432 23457888999999999999999999999999999999999999
Q ss_pred ChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcccc
Q 002186 772 NLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 848 (955)
Q Consensus 772 sL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~ 848 (955)
+|.+++.. ..++.....++.|++.|+.|||+. +++|+||||+||+++.++.++++|||++........ ....+.
T Consensus 88 ~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 164 (277)
T cd06641 88 SALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 164 (277)
T ss_pred cHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCC
Confidence 99999875 568888899999999999999998 999999999999999999999999999865433211 111234
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
.++.+||+......+.++|||||||++|||+||..|+....... ......... . ..........+.+++.+
T Consensus 165 ~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~-~--~~~~~~~~~~~~~~i~~ 235 (277)
T cd06641 165 PFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK------VLFLIPKNN-P--PTLEGNYSKPLKEFVEA 235 (277)
T ss_pred ccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH------HHHHHhcCC-C--CCCCcccCHHHHHHHHH
Confidence 55778898877788889999999999999999999886322110 000000000 0 00111233557788999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 002186 929 CTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~ 946 (955)
||+.+|.+||+++|++++
T Consensus 236 ~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 236 CLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HccCChhhCcCHHHHHhC
Confidence 999999999999999974
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.1e-32 Score=292.69 Aligned_cols=243 Identities=19% Similarity=0.209 Sum_probs=186.8
Q ss_pred hhhhccCCCCCceEEEeCC------CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
....+|+|+||.||+|+.. +.+.||+|.+..... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 88 (275)
T cd05046 9 EITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILE 88 (275)
T ss_pred eeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEE
Confidence 7788999999999999853 356799998865433 25678899999999999999999999999899999999
Q ss_pred ecCCCChhHHhhc-----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 767 YLPNGNLSEKIRT-----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 767 y~~~gsL~~~l~~-----------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
|+++|+|.++++. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++|||+++
T Consensus 89 ~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~~~~~ 165 (275)
T cd05046 89 YTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLSLSK 165 (275)
T ss_pred ecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccccccc
Confidence 9999999999864 357889999999999999999998 99999999999999999999999999976
Q ss_pred cccccCC---CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccccccc-ccC
Q 002186 836 LTQLADG---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNEN-EVG 910 (955)
Q Consensus 836 ~~~~~~~---~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 910 (955)
....... ........|.+||.......+.++|||||||++|||++ |..|+...... . ......... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-~-----~~~~~~~~~~~~~ 239 (275)
T cd05046 166 DVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-E-----VLNRLQAGKLELP 239 (275)
T ss_pred ccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-H-----HHHHHHcCCcCCC
Confidence 4322111 01112233677887777678889999999999999999 55666422110 0 000110000 000
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
.. ......+.+++.+||+.||++|||+.|++++|.+
T Consensus 240 ~~---~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 240 VP---EGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred CC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 01 1123467789999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.3e-33 Score=307.20 Aligned_cols=235 Identities=14% Similarity=0.053 Sum_probs=175.6
Q ss_pred ccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhcc---CCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 699 AARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTV---RHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 699 ~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
||+|+||+||+|.. .+|+.||||++..... .......|..++.+. +||||+++++++.+++..|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999985 5799999999964321 122334455666554 699999999999999999999999999
Q ss_pred CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcc
Q 002186 771 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPA 846 (955)
Q Consensus 771 gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~ 846 (955)
|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 999998865 457788889999999999999998 999999999999999999999999999865322111 1122
Q ss_pred cccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
++..|.+||..... .++.++||||+||++|||+||+.||....... ....+.... ..... ......+.++
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~------~~~~i~~~~-~~~~~--~~~~~~~~~l 228 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ------MYRNIAFGK-VRFPK--NVLSDEGRQF 228 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH------HHHHHHcCC-CCCCC--ccCCHHHHHH
Confidence 45557888877543 47889999999999999999999987432111 011111100 00010 0122456688
Q ss_pred HHHccCCCCCCCC----CHHHHHH
Q 002186 926 ALLCTRSTPSDRP----SMEEALK 945 (955)
Q Consensus 926 ~~~Cl~~dp~~RP----t~~ev~~ 945 (955)
+.+||+.||++|| +++|+++
T Consensus 229 i~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 229 VKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHcCCCHHHCCCCCCCHHHHhc
Confidence 8899999999998 5666654
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.1e-32 Score=291.83 Aligned_cols=244 Identities=18% Similarity=0.219 Sum_probs=184.0
Q ss_pred hhhhccCCCCCceEEEeC----CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCC------ee
Q 002186 695 ECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH------QA 761 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------~~ 761 (955)
..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++++++||||+++++++...+ ..
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05074 3 LGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIP 82 (273)
T ss_pred chhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccce
Confidence 567899999999999984 257899999987532 23556788999999999999999999886532 34
Q ss_pred EEEEeecCCCChhHHhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccc
Q 002186 762 YLLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl 833 (955)
++++||+++|+|.+++.. ..++.....++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcccc
Confidence 789999999999988742 246777899999999999999998 999999999999999999999999999
Q ss_pred cccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccc
Q 002186 834 KYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENE 908 (955)
Q Consensus 834 ~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (955)
++....... ........+.+||......++.++|||||||++|||++ |+.|+..... .. ..........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-~~-----~~~~~~~~~~ 233 (273)
T cd05074 160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-SE-----IYNYLIKGNR 233 (273)
T ss_pred cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-HH-----HHHHHHcCCc
Confidence 875432211 11111223556777777778889999999999999999 6666643221 10 0000101110
Q ss_pred cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 909 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.... ......+.+++.+|++.+|++||++.|+++.|+++
T Consensus 234 ~~~~---~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 234 LKQP---PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1101 12335688999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.5e-32 Score=294.23 Aligned_cols=244 Identities=18% Similarity=0.197 Sum_probs=186.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEc------CCe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYN------RHQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~------~~~ 760 (955)
..|. ..+.+|.|+||.||+|.. .+++.||+|.+.........+..|+.++.++ +||||+++++++.. .+.
T Consensus 16 ~~~~--~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 93 (282)
T cd06636 16 GIFE--LVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ 93 (282)
T ss_pred hhhh--hheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence 3455 678899999999999995 5789999999876554556678889999888 69999999999853 457
Q ss_pred eEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
.++||||+++|+|.+++.. ..++.....++.|+++|++|||+. +|+|||+||+||+++.++.+||+|||++..
T Consensus 94 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 94 LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred EEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 8999999999999998864 356777788999999999999998 999999999999999999999999999865
Q ss_pred ccccCC--CCcccccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 837 TQLADG--SFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 837 ~~~~~~--~~~~~~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
...... ....+...|.+||... ...++.++|||||||++|||+||+.||......... .........
T Consensus 171 ~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~------~~~~~~~~~ 244 (282)
T cd06636 171 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL------FLIPRNPPP 244 (282)
T ss_pred hhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh------hhHhhCCCC
Confidence 432111 1122344577788754 345778899999999999999999998643221110 000000000
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..........+.+++.+||+.||.+|||+.|+++
T Consensus 245 --~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 245 --KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred --CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0111123456888999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-32 Score=305.87 Aligned_cols=254 Identities=19% Similarity=0.254 Sum_probs=188.1
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcC---
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--- 758 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--- 758 (955)
++.+.|. ..+.||+|+||+||+|.. .+++.||||++.... ...+.+.+|++++++++|||||++++++...
T Consensus 12 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 12 EVPERYQ--NLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred hhhhhhh--hheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 3445666 788999999999999984 578899999987532 2244567899999999999999999987643
Q ss_pred ---CeeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccc
Q 002186 759 ---HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 759 ---~~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~ 834 (955)
...|++|||+ +++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccc
Confidence 4579999998 7899988865 578888899999999999999998 9999999999999999999999999998
Q ss_pred ccccccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc---------ccccc---
Q 002186 835 YLTQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLLG--- 901 (955)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~---------~~~~~--- 901 (955)
+........ ..++.+|.+||+... ..++.++||||+||++|||++|+.||........... .....
T Consensus 166 ~~~~~~~~~-~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd07878 166 RQADDEMTG-YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKIS 244 (343)
T ss_pred eecCCCcCC-ccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 765432221 224556788887755 5688899999999999999999999864321100000 00000
Q ss_pred -----ccccccccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 902 -----EMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 902 -----~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
......+....... ......+.+++.+|++.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 245 SEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred hhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000000000 0112346789999999999999999999864
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-32 Score=303.15 Aligned_cols=243 Identities=16% Similarity=0.094 Sum_probs=183.7
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+++. .+++.||||.+.... .....+.+|+.++..++|+||+++++++.+++..|+||||++
T Consensus 5 i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~ 84 (331)
T cd05624 5 IIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYV 84 (331)
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCC
Confidence 678899999999999985 478899999987522 234457888999999999999999999999999999999999
Q ss_pred CCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC---
Q 002186 770 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 843 (955)
Q Consensus 770 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--- 843 (955)
+|+|.++++. ..++.....++.|++.||+|+|+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 85 gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 161 (331)
T cd05624 85 GGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSS 161 (331)
T ss_pred CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeec
Confidence 9999999965 457778888999999999999998 9999999999999999999999999998654332211
Q ss_pred CcccccccCchhhhhc-----cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccc-ccCCCCchHH
Q 002186 844 FPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQD 917 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~-----~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 917 (955)
...+...|.+||+... ..++.++|||||||++|||+||+.||....... ....+.... ....+....+
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~------~~~~i~~~~~~~~~p~~~~~ 235 (331)
T cd05624 162 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHEERFQFPSHITD 235 (331)
T ss_pred cccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH------HHHHHHcCCCcccCCCcccc
Confidence 1224556788898765 357788999999999999999999987433211 011111100 0111111122
Q ss_pred HHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSD--RPSMEEALKL 946 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~--RPt~~ev~~~ 946 (955)
...++.+++.+|+..++++ |+++++++++
T Consensus 236 ~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 236 VSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 3345667777777765544 5688888754
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-32 Score=299.41 Aligned_cols=248 Identities=23% Similarity=0.319 Sum_probs=187.0
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|+||.||+|... +|+.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+++
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 84 (286)
T cd07846 5 NLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDH 84 (286)
T ss_pred EeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCc
Confidence 6788999999999999965 689999999864322 245677899999999999999999999999999999999999
Q ss_pred CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC--cc
Q 002186 771 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF--PA 846 (955)
Q Consensus 771 gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~--~~ 846 (955)
++|.++... ..+|.+...++.|+++|++|||+. +|+|||+||+||++++++.+|++|||++.......... ..
T Consensus 85 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 161 (286)
T cd07846 85 TVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYV 161 (286)
T ss_pred cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCccc
Confidence 999888764 468999999999999999999998 99999999999999999999999999987543322111 11
Q ss_pred cccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc--------cccccccc------ccccCC
Q 002186 847 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID--------GLLGEMYN------ENEVGS 911 (955)
Q Consensus 847 ~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~--------~~~~~~~~------~~~~~~ 911 (955)
+..++.+||+..+ ..++.++|||||||++|||+||+.|+............ .......+ ....+.
T Consensus 162 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (286)
T cd07846 162 ATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPE 241 (286)
T ss_pred ceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcccccc
Confidence 3445677887654 45678899999999999999999887643321100000 00000000 000000
Q ss_pred CC-------chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 912 SS-------SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 912 ~~-------~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.. ..+.....+.+++.+||+.+|++||+++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 242 VKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00 00122456889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.7e-32 Score=302.41 Aligned_cols=243 Identities=16% Similarity=0.083 Sum_probs=182.1
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+++.. +++.||+|.+.... ...+.+.+|+.++..++|+||+++++++.+++..++||||++
T Consensus 5 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~ 84 (332)
T cd05623 5 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYV 84 (332)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccC
Confidence 6788999999999999854 68889999986422 224457889999999999999999999999999999999999
Q ss_pred CCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---C
Q 002186 770 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---S 843 (955)
Q Consensus 770 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~---~ 843 (955)
+|+|.+++++ ..++.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 85 ~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~ 161 (332)
T cd05623 85 GGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS 161 (332)
T ss_pred CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCCcceec
Confidence 9999999965 457888888999999999999998 999999999999999999999999999865422211 1
Q ss_pred CcccccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccc-ccCCCCchHH
Q 002186 844 FPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQD 917 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 917 (955)
...++..|.+||+.. ...++.++|||||||++|||++|+.||........ ...+.... ....+.....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~------~~~i~~~~~~~~~p~~~~~ 235 (332)
T cd05623 162 VAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKIMNHKERFQFPAQVTD 235 (332)
T ss_pred ccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH------HHHHhCCCccccCCCcccc
Confidence 122455678889875 23578899999999999999999999974332110 11111100 0001111112
Q ss_pred HHHHHHHHHHHccC--CCCCCCCCHHHHHHH
Q 002186 918 EIKLVLDVALLCTR--STPSDRPSMEEALKL 946 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~--~dp~~RPt~~ev~~~ 946 (955)
....+.+++.+|+. +++..||+++|++++
T Consensus 236 ~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 236 VSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 23445566666554 444457899999865
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.5e-32 Score=294.53 Aligned_cols=246 Identities=17% Similarity=0.225 Sum_probs=193.5
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
++|. ..+.+|+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++++++||||++++++|...+..++|||
T Consensus 19 ~~~~--~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 19 KKYT--RFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhce--eeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 4566 778899999999999984 578899999986432 335667889999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 767 YLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 767 y~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
|+++|+|.+++.+ ..++.++..++.|++.|++|||+. +++|||+||+||+++.++.+||+|||++.........
T Consensus 97 ~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~ 173 (293)
T cd06647 97 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 173 (293)
T ss_pred cCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccccccccc
Confidence 9999999999976 568888999999999999999998 9999999999999999999999999987654332211
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+...|.+||......++.++|||||||++||+++|+.||......... ... ...+.+. ..........+.
T Consensus 174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~-~~~----~~~~~~~--~~~~~~~~~~l~ 246 (293)
T cd06647 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YLI----ATNGTPE--LQNPEKLSAIFR 246 (293)
T ss_pred cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe-eeh----hcCCCCC--CCCccccCHHHH
Confidence 112344467788887777888999999999999999999998743321110 000 0001100 111122334577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+++.+||+.+|.+||+++|++.+
T Consensus 247 ~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 247 DFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 89999999999999999999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.9e-32 Score=289.10 Aligned_cols=240 Identities=15% Similarity=0.183 Sum_probs=187.9
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc-CCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ey~~ 769 (955)
..+.+|+|++|.||++.. .+|+.||||++.... ...+.+.+|++++++++||||+++++.+.. ++..++||||++
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (257)
T cd08223 4 FVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCE 83 (257)
T ss_pred EEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccC
Confidence 667899999999999985 468899999996532 234567889999999999999999998764 446899999999
Q ss_pred CCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 770 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 770 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
+++|.++++. ..++.+...++.|++.|++|+|+. +|+||||||+||+++.++.+|++|||++.........
T Consensus 84 ~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 84 GGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence 9999999864 368889999999999999999998 9999999999999999999999999998755322211
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+...|.+||+.....++.++||||+||++|||+||+.|+..... .. ......... . ..........+.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-~~-----~~~~~~~~~-~--~~~~~~~~~~~~ 231 (257)
T cd08223 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-NS-----LVYRIIEGK-L--PPMPKDYSPELG 231 (257)
T ss_pred cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-HH-----HHHHHHhcC-C--CCCccccCHHHH
Confidence 11234457889998888889999999999999999999998863321 10 000111110 1 011122335677
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+++.+|++.||++|||+.|++++
T Consensus 232 ~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 232 ELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHHHHHhccCcccCCCHHHHhcC
Confidence 89999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=288.92 Aligned_cols=242 Identities=23% Similarity=0.275 Sum_probs=188.9
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|+||.||+|+. .+|+.||+|.++.... ..+.+.+|++++++++|+||+++++++...+..++|+||+++
T Consensus 4 ~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (264)
T cd06626 4 RGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSG 83 (264)
T ss_pred eeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCC
Confidence 567899999999999985 4789999999976433 456788999999999999999999999999999999999999
Q ss_pred CChhHHhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC----
Q 002186 771 GNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---- 844 (955)
Q Consensus 771 gsL~~~l~~~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---- 844 (955)
++|.+++... .++.....++.|+++|++|||+. +|+||||||+||+++.++.+||+|||.+..........
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 160 (264)
T cd06626 84 GTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEV 160 (264)
T ss_pred CcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccc
Confidence 9999999774 67888899999999999999998 99999999999999999999999999987643322110
Q ss_pred --cccccccCchhhhhccC---CcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 845 --PAKIAWTESGEFYNAMK---EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 845 --~~~~~~~~~~e~~~~~~---~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
..+...+.+||+..... .+.++|||||||++|||++|+.||....... ........ ... . ..+......
T Consensus 161 ~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~--~~~~~~~~--~~~-~-~~~~~~~~~ 234 (264)
T cd06626 161 QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF--QIMFHVGA--GHK-P-PIPDSLQLS 234 (264)
T ss_pred cCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH--HHHHHHhc--CCC-C-CCCcccccC
Confidence 11233366778776555 7889999999999999999999986432211 11100001 000 0 011111223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..+.+++.+||+.+|.+|||++|++.
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 235 PEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhc
Confidence 45678889999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.3e-32 Score=293.43 Aligned_cols=248 Identities=19% Similarity=0.251 Sum_probs=195.4
Q ss_pred HhhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.|. ..+.+|.|++|.||+|... ++..||+|+++......+.+.+|++.+++++|+||+++++++...+..++|+
T Consensus 17 ~~~~~~--~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 17 PRELYK--NLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred ccccch--HhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 334455 7788999999999999976 7899999999865445667888999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 766 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
||+++++|.+++.. ..++..+..++.|+++|++|||+. +|+|+|+||+||+++.++.+||+|||++........
T Consensus 95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 99999999999976 468899999999999999999998 999999999999999999999999998764432211
Q ss_pred C--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 843 S--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 843 ~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
. ...+...|.+||+.....++.++|||||||++|||+||+.|+........ ........ ............
T Consensus 172 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~ 244 (286)
T cd06614 172 KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA------LFLITTKG-IPPLKNPEKWSP 244 (286)
T ss_pred hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhcC-CCCCcchhhCCH
Confidence 1 11233457788988777889999999999999999999999864322110 00000000 000111112335
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+.+++.+|++.+|.+|||+.|++++
T Consensus 245 ~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 245 EFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred HHHHHHHHHhccChhhCcCHHHHhhC
Confidence 67789999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.7e-32 Score=294.10 Aligned_cols=247 Identities=19% Similarity=0.265 Sum_probs=182.8
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|++|.||+|... +|+.||||.+..... ....+.+|++++++++||||+++++++.+++..++||||++ +
T Consensus 9 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 87 (291)
T cd07844 9 KLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-T 87 (291)
T ss_pred EEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-C
Confidence 7788999999999999965 789999999865322 23456689999999999999999999999999999999998 5
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Ccc
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 846 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~ 846 (955)
+|.+++.. ..++.....++.|+++||.|||+. +|+||||||+||+++.++.+|++|||+++........ ...
T Consensus 88 ~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (291)
T cd07844 88 DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEV 164 (291)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCCccccccc
Confidence 99998865 457788889999999999999998 9999999999999999999999999998643221111 111
Q ss_pred cccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc----------ccccc------cccccccc-
Q 002186 847 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP----------IDGLL------GEMYNENE- 908 (955)
Q Consensus 847 ~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~----------~~~~~------~~~~~~~~- 908 (955)
....+.+||+..+ ..++.++||||+||++|||++|+.||.......... ..... ........
T Consensus 165 ~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (291)
T cd07844 165 VTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFP 244 (291)
T ss_pred cccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccccc
Confidence 2344677887654 457889999999999999999999886433110000 00000 00000000
Q ss_pred cCCCCch----HH--HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 909 VGSSSSL----QD--EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 909 ~~~~~~~----~~--~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....... .. ....+.+++.+|++.||++|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 245 FYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000 00 1256678999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-31 Score=288.41 Aligned_cols=241 Identities=19% Similarity=0.249 Sum_probs=187.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccC---CCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.+|+|+||.||+|+. .+|+.||||.++... ...+.+.+|++++++++ |||+++++++|...+..++||||+
T Consensus 5 ~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06917 5 RLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYA 84 (277)
T ss_pred hhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecC
Confidence 678899999999999995 689999999986532 23456778899998887 999999999999999999999999
Q ss_pred CCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Cc
Q 002186 769 PNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FP 845 (955)
Q Consensus 769 ~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~ 845 (955)
++++|.++++. ..++.....++.|+++|++|||+. +|+||||||+||+++.++.++++|||++......... ..
T Consensus 85 ~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06917 85 EGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTF 161 (277)
T ss_pred CCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccc
Confidence 99999999866 557888899999999999999998 9999999999999999999999999998755432211 11
Q ss_pred ccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 846 AKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 846 ~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
.+...|.+||.... ..++.++|||||||++|||++|+.|+........ . . .......+. . .. ......+.+
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-~-~-~~~~~~~~~-~--~~--~~~~~~~~~ 233 (277)
T cd06917 162 VGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-M-M-LIPKSKPPR-L--ED--NGYSKLLRE 233 (277)
T ss_pred cCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-h-h-ccccCCCCC-C--Cc--ccCCHHHHH
Confidence 23334667786653 4568899999999999999999999864332111 0 0 000000000 1 00 113456778
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 002186 925 VALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
++.+||+.||++||++.|+++.
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhhC
Confidence 9999999999999999999863
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=291.22 Aligned_cols=241 Identities=16% Similarity=0.255 Sum_probs=189.6
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..+.||+|++|.||+|.. .+|+.||+|+++.... ..+.+.+|+.++++++||||+++++++...+..++|+||+++++
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~ 102 (285)
T cd06648 23 NFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGA 102 (285)
T ss_pred cceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCC
Confidence 557899999999999984 5789999999865332 34567889999999999999999999999999999999999999
Q ss_pred hhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Cccccc
Q 002186 773 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKIA 849 (955)
Q Consensus 773 L~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~~~~ 849 (955)
|.+++.. ..++.+...++.|++.|++|||+. +|+||||||+||+++.++.+|++|||++......... ...+..
T Consensus 103 L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 179 (285)
T cd06648 103 LTDIVTHTRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 179 (285)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCc
Confidence 9999876 467888899999999999999998 9999999999999999999999999987643322111 112345
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
.|.+||......++.++|||||||++|||++|+.|+........ . ........+. ..........+.+++.+|
T Consensus 180 ~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~--~-~~~~~~~~~~----~~~~~~~~~~l~~li~~~ 252 (285)
T cd06648 180 YWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA--M-KRIRDNLPPK----LKNLHKVSPRLRSFLDRM 252 (285)
T ss_pred cccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH--H-HHHHhcCCCC----CcccccCCHHHHHHHHHH
Confidence 57788988777789999999999999999999999864332110 0 0011110000 111111234678899999
Q ss_pred cCCCCCCCCCHHHHHH
Q 002186 930 TRSTPSDRPSMEEALK 945 (955)
Q Consensus 930 l~~dp~~RPt~~ev~~ 945 (955)
|+.+|++|||++|+++
T Consensus 253 l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 253 LVRDPAQRATAAELLN 268 (285)
T ss_pred cccChhhCcCHHHHcc
Confidence 9999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=287.02 Aligned_cols=244 Identities=20% Similarity=0.284 Sum_probs=189.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.+|.|++|+||+|.. .+|..||+|++.... ...+.+.+|++.+++++|+||+++++.+..++..++||||++++
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~ 84 (267)
T cd06610 5 LIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGG 84 (267)
T ss_pred eeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCC
Confidence 678899999999999994 478899999986532 24567889999999999999999999999999999999999999
Q ss_pred ChhHHhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC---
Q 002186 772 NLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 843 (955)
Q Consensus 772 sL~~~l~~-----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--- 843 (955)
+|.++++. ..++.....++.|++.|++|||+. +|+||||||+||++++++.+|++|||++.........
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~ 161 (267)
T cd06610 85 SLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRK 161 (267)
T ss_pred cHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccccc
Confidence 99999965 357888889999999999999998 9999999999999999999999999998654332211
Q ss_pred ---CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 844 ---FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 844 ---~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
...+...|.+||+.... ..+.++|||||||++|||+||+.|+........ ........ .+. ...........
T Consensus 162 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~~~~~~-~~~-~~~~~~~~~~~ 237 (267)
T cd06610 162 VRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV--LMLTLQND-PPS-LETGADYKKYS 237 (267)
T ss_pred ccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh--HHHHhcCC-CCC-cCCcccccccc
Confidence 11133446677877655 688899999999999999999999864332110 00111110 000 10011112334
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..+.+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 238 KSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 56789999999999999999999986
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=289.67 Aligned_cols=239 Identities=12% Similarity=0.048 Sum_probs=178.6
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHH---HhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~---l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
.||+|+||.||++.. .+|+.||||.+..... ....+.+|..+ +...+||||+++++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 479999999999985 5789999999865321 12233344433 334579999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccc
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 847 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~ 847 (955)
+|+|.+++.. .+++.....++.|++.|++|||+. +|+||||||+||+++.++.+|++|||++............+
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 157 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCC
Confidence 9999999865 468899999999999999999998 99999999999999999999999999986443222222234
Q ss_pred ccccCchhhhh-ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||... +..++.++||||+||++|||+||+.||......... ........... ........++.+++
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~~~~li 230 (279)
T cd05633 158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH----EIDRMTLTVNV---ELPDSFSPELKSLL 230 (279)
T ss_pred CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH----HHHHHhhcCCc---CCccccCHHHHHHH
Confidence 45577888765 456788999999999999999999998643221100 00011000001 01112334577888
Q ss_pred HHccCCCCCCCC-----CHHHHHHH
Q 002186 927 LLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 927 ~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
.+|+..||++|| +++|++++
T Consensus 231 ~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 231 EGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 999999999999 59998874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=284.44 Aligned_cols=241 Identities=21% Similarity=0.285 Sum_probs=187.9
Q ss_pred hhhhccCCCCCceEEEeCCC-----CcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVLPT-----GITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~-----g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.+|+|+||.||+|...+ +..||+|.++.... ..+.+.+|++.+.+++||||+++++++.+.+..++||||
T Consensus 3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~ 82 (258)
T smart00219 3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY 82 (258)
T ss_pred ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence 45789999999999999643 48899999976543 456788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc--C--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 768 LPNGNLSEKIRT--K--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 768 ~~~gsL~~~l~~--~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
+++++|.+++.. . .++.+...++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++........
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (258)
T smart00219 83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY 159 (258)
T ss_pred cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence 999999999965 2 78889999999999999999999 9999999999999999999999999998755432111
Q ss_pred Cc---ccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 844 FP---AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 844 ~~---~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
.. .....+.+||......++.++||||+||++|||++ |..|+... ... ............. ......
T Consensus 160 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~-~~~-----~~~~~~~~~~~~~---~~~~~~ 230 (258)
T smart00219 160 KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM-SNE-----EVLEYLKKGYRLP---KPENCP 230 (258)
T ss_pred ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-CHH-----HHHHHHhcCCCCC---CCCcCC
Confidence 11 12234677888777788999999999999999999 55555431 110 0000111111010 011134
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLL 947 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L 947 (955)
.++.+++.+|+..||++|||+.|+++.|
T Consensus 231 ~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 231 PEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 5677899999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-34 Score=311.61 Aligned_cols=363 Identities=24% Similarity=0.394 Sum_probs=192.1
Q ss_pred EEEEEcCCCCCCc-cCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEe
Q 002186 77 VVGINLSMKGLSG-ALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (955)
Q Consensus 77 v~~l~l~~~~l~g-~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ld 155 (955)
|.++|++++.++| .+|.+... +++++.|.|....+. .+|.+++.|.+|++|.+++|++.. +-+.+..|+.|+.++
T Consensus 9 VrGvDfsgNDFsg~~FP~~v~q--Mt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~-vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 9 VRGVDFSGNDFSGDRFPHDVEQ--MTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS-VHGELSDLPRLRSVI 84 (1255)
T ss_pred eecccccCCcCCCCcCchhHHH--hhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh-hhhhhccchhhHHHh
Confidence 4445555555553 34433333 445555555554444 445555555555555555555542 233444555555555
Q ss_pred CCCCCCC-CCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEeccccccc
Q 002186 156 AFSNSFS-GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ 234 (955)
Q Consensus 156 L~~N~l~-~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~ 234 (955)
+..|++. .-+|.++..|..|..||||+|++. ..|..+..-+++-+|+||+|+|.. ||.
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Iet-IPn------------------- 143 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIET-IPN------------------- 143 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCcccc-CCc-------------------
Confidence 5555543 134555555555555555555554 345555555555555555555532 222
Q ss_pred CCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCC-CCCCccc
Q 002186 235 GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS-GPIPESF 313 (955)
Q Consensus 235 g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~ 313 (955)
..+-+++.|-+||||+|.+. .+|+.+..|..|++|+|++|.+.-..-..+..+++|+.|.+++.+=+ ..+|.++
T Consensus 144 ----~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsl 218 (1255)
T KOG0444|consen 144 ----SLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSL 218 (1255)
T ss_pred ----hHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCch
Confidence 22334445555555555554 34444455555555555555443222222334445555555543321 2355555
Q ss_pred CCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccce
Q 002186 314 ADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFK 393 (955)
Q Consensus 314 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~ 393 (955)
..+.+|..+|+|.|++. .+|+.+..+++|+.|+||+|+++ .+....+...+|+.|++|.|+++ .+|+.+|.++.|+.
T Consensus 219 d~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~k 295 (1255)
T KOG0444|consen 219 DDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTK 295 (1255)
T ss_pred hhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHH
Confidence 55555555555555555 45555555556666666666555 23333444455566666666665 55666666666666
Q ss_pred eeccCCCCCC-CCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCC
Q 002186 394 LILFSNNFTG-SLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNP 472 (955)
Q Consensus 394 l~l~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~ 472 (955)
|.+.+|+++- -+|..++.+.+|+.+..++|.+. .+|..+..++.|+.|.|+.|++. .+|+.+.-++.|+.||+..|+
T Consensus 296 Ly~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 296 LYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred HHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 6666665432 24555666666666666666665 55666666666666666666665 456666666666666666665
Q ss_pred CC
Q 002186 473 KL 474 (955)
Q Consensus 473 ~l 474 (955)
.+
T Consensus 374 nL 375 (1255)
T KOG0444|consen 374 NL 375 (1255)
T ss_pred Cc
Confidence 54
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-32 Score=295.30 Aligned_cols=247 Identities=19% Similarity=0.231 Sum_probs=183.6
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|++|.||+|+. .+|+.||||+++.... ..+.+.+|++.+++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~- 82 (284)
T cd07860 4 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH- 82 (284)
T ss_pred eeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-
Confidence 677899999999999985 4799999999865322 23567889999999999999999999999999999999996
Q ss_pred CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC--
Q 002186 771 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF-- 844 (955)
Q Consensus 771 gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~-- 844 (955)
++|.+++.. ..++.....++.|+++|++|||+. +++||||||+||+++.++.+|++|||+++.........
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (284)
T cd07860 83 QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 159 (284)
T ss_pred cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence 689888854 457888999999999999999998 99999999999999999999999999986543222111
Q ss_pred cccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cc--------------ccccccccc
Q 002186 845 PAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL--------------LGEMYNENE 908 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~--------------~~~~~~~~~ 908 (955)
.....++.+||...+. .++.++|||||||++|||+||+.||............ .. ..+.....+
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07860 160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP 239 (284)
T ss_pred ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence 1133456778866543 3578899999999999999999998643221000000 00 000000000
Q ss_pred cCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 909 VGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 909 ~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....... +.....+.+++.+|++.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000000 112245678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=287.84 Aligned_cols=245 Identities=20% Similarity=0.218 Sum_probs=188.1
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCC------e
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH------Q 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~------~ 760 (955)
+.|. ..+.+|+|++|.||+|... +++.||+|.+.......+.+.+|+++++++ +||||+++++++.... .
T Consensus 6 ~~y~--~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 6 GIFE--LVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred hhee--heeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 3455 7788999999999999964 688999999986655567788999999998 6999999999997644 4
Q ss_pred eEEEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~ 834 (955)
.++||||+++++|.+++.. ..++.....++.|+++|++|||+. +|+||||+|+||+++.++.+|++|||++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCccc
Confidence 8999999999999998854 457888889999999999999998 9999999999999999999999999998
Q ss_pred ccccccCCC--CcccccccCchhhhhc-----cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccc
Q 002186 835 YLTQLADGS--FPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN 907 (955)
Q Consensus 835 ~~~~~~~~~--~~~~~~~~~~~e~~~~-----~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (955)
......... ...+...|.+||+... ..++.++|||||||++|||+||+.|+....... ...++....
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~ 234 (275)
T cd06608 161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR------ALFKIPRNP 234 (275)
T ss_pred eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH------HHHHhhccC
Confidence 654322111 1123444677776543 346778999999999999999999986332111 000111100
Q ss_pred ccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 908 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.............+.+++.+||..||++|||++|+++
T Consensus 235 -~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 235 -PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred -CCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0001111223456778999999999999999999986
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=285.69 Aligned_cols=243 Identities=19% Similarity=0.204 Sum_probs=193.7
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|++|.||+|+.. +|+.||||++.... ...+.+.+|++.+.+++||||+++++++...+..++||||++++
T Consensus 5 ~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (264)
T cd06623 5 RVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGG 84 (264)
T ss_pred eeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCC
Confidence 6788999999999999965 69999999987644 24667889999999999999999999999999999999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Ccc
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 846 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~ 846 (955)
+|.+++.. ..+......++.|+++|++|+|+ . +++||||||+||+++.++.+|++|||.+......... ...
T Consensus 85 ~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 161 (264)
T cd06623 85 SLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFV 161 (264)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCCccccee
Confidence 99999974 56788889999999999999999 8 9999999999999999999999999998765432222 112
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH-HHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD-EIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l 925 (955)
+...|.+||......++.++||||||+++|||+||+.|+....... .......+...... ..... ....+.++
T Consensus 162 ~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~l~~l 235 (264)
T cd06623 162 GTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS---FFELMQAICDGPPP---SLPAEEFSPEFRDF 235 (264)
T ss_pred ecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC---HHHHHHHHhcCCCC---CCCcccCCHHHHHH
Confidence 3445678898888788899999999999999999999986443100 01111111111101 11111 34567889
Q ss_pred HHHccCCCCCCCCCHHHHHHH
Q 002186 926 ALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.+|++.+|++||++.|++++
T Consensus 236 i~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 236 ISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHccCChhhCCCHHHHHhC
Confidence 999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=286.19 Aligned_cols=240 Identities=17% Similarity=0.188 Sum_probs=187.9
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|+|++|.||+|.. .+++.+|||.+.... ...+.+.+|++++++++||||+++++++..++..++||||+++
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd08220 4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPG 83 (256)
T ss_pred EEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCC
Confidence 677899999999999985 578899999986532 2356788899999999999999999999999999999999999
Q ss_pred CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC-CCceECcccccccccccCCC-C
Q 002186 771 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLADGS-F 844 (955)
Q Consensus 771 gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~-~~~ki~DfGl~~~~~~~~~~-~ 844 (955)
|+|.+++.. ..++.....++.|+++|++|||+. +|+||||||+||+++.+ ..+|++|||++......... .
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (256)
T cd08220 84 GTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT 160 (256)
T ss_pred CCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccc
Confidence 999999975 257888899999999999999998 99999999999999855 46899999998755432211 1
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..+...|.+||.......+.++|||||||++|||+||+.|+...... . ........... +........+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~-----~~~~~~~~~~~---~~~~~~~~~l~~ 231 (256)
T cd08220 161 VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-A-----LVLKIMSGTFA---PISDRYSPDLRQ 231 (256)
T ss_pred cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-H-----HHHHHHhcCCC---CCCCCcCHHHHH
Confidence 12334577888888778889999999999999999999998643211 1 01111111000 001122345778
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 002186 925 VALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
++..||+.||++|||++|++++
T Consensus 232 li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 232 LILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HHHHHccCChhhCCCHHHHhhC
Confidence 9999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=293.82 Aligned_cols=242 Identities=23% Similarity=0.278 Sum_probs=186.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+.|. ..+.+|+|+||.||+|+. .+|+.||+|++.... ...+.+.+|++++++++||||++++++|.+++..++
T Consensus 15 ~~y~--~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l 92 (307)
T cd06607 15 KLFT--DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL 92 (307)
T ss_pred hhhh--hheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence 4465 778899999999999986 478999999986432 223567889999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||++ |++.+.+.. ..++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 93 v~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 93 VMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred EHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 999997 677777643 568888999999999999999998 9999999999999999999999999998654322
Q ss_pred CCCCcccccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 841 DGSFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 841 ~~~~~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
.. ..+...|.+||... ...++.++|||||||++|||+||+.|+........ ........ .. ......
T Consensus 169 ~~--~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~------~~~~~~~~-~~-~~~~~~ 238 (307)
T cd06607 169 NS--FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQND-SP-TLSSND 238 (307)
T ss_pred CC--ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH------HHHHhcCC-CC-CCCchh
Confidence 11 12233467778663 34578899999999999999999998864321110 00000000 00 001122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+.+++.+||+.||++||+|.+++.+
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 239 WSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred hCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 34567889999999999999999999874
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-32 Score=288.01 Aligned_cols=240 Identities=15% Similarity=0.189 Sum_probs=188.0
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|+|+||.||+|... +|..||+|.+.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (257)
T cd08225 4 IIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDG 83 (257)
T ss_pred EEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCC
Confidence 6678999999999999964 68899999986532 2345678899999999999999999999999999999999999
Q ss_pred CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-CceECcccccccccccCCC--
Q 002186 771 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 771 gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~-~~ki~DfGl~~~~~~~~~~-- 843 (955)
++|.+++.. ..++..+..++.|+++|++|||+. +|+|+||||+||++++++ .+|++|||.+.........
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (257)
T cd08225 84 GDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY 160 (257)
T ss_pred CcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence 999999865 357899999999999999999998 999999999999999875 4699999998655432211
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+...+.+||+.....++.++|||||||++|||++|+.|+..... ..... ........+. . ......+.
T Consensus 161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~-~~~~~~~~~~----~---~~~~~~~~ 231 (257)
T cd08225 161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-HQLVL-KICQGYFAPI----S---PNFSRDLR 231 (257)
T ss_pred ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-HHHHH-HHhcccCCCC----C---CCCCHHHH
Confidence 11234447788888777888999999999999999999999863321 11110 1111111110 1 11234577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+++.+|+..+|++|||++|+++.
T Consensus 232 ~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 232 SLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHHHHHhccChhhCcCHHHHhhC
Confidence 88899999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=293.92 Aligned_cols=244 Identities=14% Similarity=0.115 Sum_probs=186.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.+|+|+||.||++.. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 5 ~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (305)
T cd05609 5 TIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVE 84 (305)
T ss_pred EeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCC
Confidence 678899999999999985 478899999987542 224567789999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-----
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----- 842 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~----- 842 (955)
+|+|.+++.. ..++.....++.|+++|++|+|+. +|+||||||+||+++.++.+|++|||+++.......
T Consensus 85 g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (305)
T cd05609 85 GGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYE 161 (305)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccc
Confidence 9999999965 457788888999999999999998 999999999999999999999999998763211000
Q ss_pred ------------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 843 ------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 843 ------------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
....+...|.+||+.....++.++|||||||++|||+||+.||.+.... . ......... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~-~-----~~~~~~~~~-~~ 234 (305)
T cd05609 162 GHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-E-----LFGQVISDD-IE 234 (305)
T ss_pred cccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-H-----HHHHHHhcc-cC
Confidence 0011233467788877778899999999999999999999998643211 0 011111100 00
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
...........+.+++.+||+.||++||++.++.+.|+
T Consensus 235 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 235 WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred CCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 00000122345778999999999999999665555554
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=286.35 Aligned_cols=243 Identities=19% Similarity=0.253 Sum_probs=188.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc--CCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ey~ 768 (955)
..+.+|.|+||.||+|.. .+|+.||+|.++... ...+.+.+|++.+++++||||+++++++.. ....++||||+
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~ 83 (265)
T cd08217 4 VLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYC 83 (265)
T ss_pred eeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhc
Confidence 667899999999999984 578999999986432 234567889999999999999999998864 35679999999
Q ss_pred CCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCC--CCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 769 PNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDC--YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 769 ~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~--~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
++|+|.+++.. .+++.+...++.|+++|++|||..+ ..+|+||||||+||+++.++.+|++|||++......
T Consensus 84 ~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 163 (265)
T cd08217 84 EGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHD 163 (265)
T ss_pred cCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCC
Confidence 99999999854 4578888999999999999999432 339999999999999999999999999998765433
Q ss_pred CC--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 841 DG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 841 ~~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
.. ....+...+.+||......++.++|||||||++|||++|+.|+...... .. ........ . .......
T Consensus 164 ~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~---~~~~~~~~-~--~~~~~~~ 234 (265)
T cd08217 164 SSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---QL---ASKIKEGK-F--RRIPYRY 234 (265)
T ss_pred cccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---HH---HHHHhcCC-C--CCCcccc
Confidence 21 1112345577889888778889999999999999999999998743210 00 01111111 1 0111223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...+.+++.+|++.+|++||+++||+++
T Consensus 235 ~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 235 SSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 4567899999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=286.53 Aligned_cols=239 Identities=15% Similarity=0.174 Sum_probs=182.7
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc------chHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 765 (955)
..+.+|+|+||.||+|.. .+|..||||.+.... ...+.+.+|++++++++||||+++++++.+. ...++||
T Consensus 6 ~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~ 85 (265)
T cd06652 6 LGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFM 85 (265)
T ss_pred EeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEE
Confidence 678899999999999985 579999999985321 1245678899999999999999999988763 4688999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC--
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 841 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~-- 841 (955)
||+++|+|.+++.. ..++....+++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||+++......
T Consensus 86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 162 (265)
T cd06652 86 EHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS 162 (265)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccccccccccc
Confidence 99999999999865 357777889999999999999998 99999999999999999999999999886533211
Q ss_pred ---CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 842 ---GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 842 ---~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
.....+...|.+||......++.++|||||||++|||++|+.|+........ ..+....... .......
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~~~~~~~~~--~~~~~~~ 234 (265)
T cd06652 163 GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA------IFKIATQPTN--PVLPPHV 234 (265)
T ss_pred ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH------HHHHhcCCCC--CCCchhh
Confidence 1111233447788888777888999999999999999999999864321110 0011100000 1111233
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...+.+++.+|+. +|++||+++|+++
T Consensus 235 ~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 235 SDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred CHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 3456677788884 9999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=296.90 Aligned_cols=254 Identities=20% Similarity=0.233 Sum_probs=190.7
Q ss_pred HhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcC----
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR---- 758 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~---- 758 (955)
+.+.|. ..+.||+|+||+||+|.. .+|+.||||++... ....+.+.+|++++++++||||+++++++...
T Consensus 14 ~~~~y~--~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 14 VLKRYQ--NLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhcceE--EEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcc
Confidence 345676 778999999999999985 58999999998642 22345667899999999999999999998643
Q ss_pred --CeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 759 --HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 759 --~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
...|+||||++ |+|.+.+....+..+...++.|+++||+|||+. +|+||||||+||+++.++.+|++|||+++.
T Consensus 92 ~~~~~~lv~e~~~-~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 167 (353)
T cd07850 92 EFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 167 (353)
T ss_pred ccCcEEEEEeccC-CCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCcccee
Confidence 35799999996 589998887788888899999999999999998 999999999999999999999999999875
Q ss_pred ccccCCCC-cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc----------------cc
Q 002186 837 TQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------------GL 899 (955)
Q Consensus 837 ~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~----------------~~ 899 (955)
........ ..+...|.+||......++.++|||||||++|||++|+.||........+... ..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
T cd07850 168 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPT 247 (353)
T ss_pred CCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhh
Confidence 43322111 12344578899888888999999999999999999999998643211100000 00
Q ss_pred ccccccccc--------------cCC---CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 900 LGEMYNENE--------------VGS---SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 900 ~~~~~~~~~--------------~~~---~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
........+ ... ..........+.+++.+|++.||++|||++|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 248 VRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 000 00011224457899999999999999999999863
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=290.07 Aligned_cols=241 Identities=18% Similarity=0.191 Sum_probs=179.2
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHH-HhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITR-IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|+||.||+|+. .+|+.||||+++.... ....+..|+.. ++..+|||||++++++..++..++||||++
T Consensus 5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~- 83 (283)
T cd06617 5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD- 83 (283)
T ss_pred EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-
Confidence 667899999999999985 4799999999875422 23344445554 666789999999999999999999999996
Q ss_pred CChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 771 GNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 771 gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
|+|.+++.. ..++.....++.|++.|++|||+.+ +++||||||+||+++.++.+||+|||+++.........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 161 (283)
T cd06617 84 TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKT 161 (283)
T ss_pred ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 788887754 3578888999999999999999753 79999999999999999999999999987543221111
Q ss_pred -cccccccCchhhhhc----cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 845 -PAKIAWTESGEFYNA----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 845 -~~~~~~~~~~e~~~~----~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
..+...|.+||...+ ..++.++|||||||++|||+||+.|+........ .............. .....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~ 234 (283)
T cd06617 162 IDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ-----QLKQVVEEPSPQLP--AEKFS 234 (283)
T ss_pred cccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH-----HHHHHHhcCCCCCC--ccccC
Confidence 123344677887654 3457889999999999999999999863221100 01111111100000 01123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.++.+++.+||..+|++||+++|+++
T Consensus 235 ~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 235 PEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 56778999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=289.36 Aligned_cols=244 Identities=18% Similarity=0.193 Sum_probs=182.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|+||.||++.. .+|+.||||++.... .....+.+|+..+.++. |||||+++|++..++..++||||++
T Consensus 8 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~- 86 (288)
T cd06616 8 DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD- 86 (288)
T ss_pred HHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-
Confidence 678899999999999985 578999999987532 23556788999999996 9999999999999999999999986
Q ss_pred CChhHHhh-------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 771 GNLSEKIR-------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 771 gsL~~~l~-------~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
+++.++.. ...++.....++.|+++|++|||+.+ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 87 ~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 164 (288)
T cd06616 87 ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK 164 (288)
T ss_pred CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccCCcc
Confidence 45554331 24677888899999999999999742 899999999999999999999999999865432211
Q ss_pred CCcccccccCchhhhhcc---CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccc-ccCCCCchHHH
Q 002186 843 SFPAKIAWTESGEFYNAM---KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQDE 918 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~---~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 918 (955)
....+...|.+||..... .++.++|||||||++|||+||+.||....... ....+..... +..........
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd06616 165 TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVF-----DQLTQVVKGDPPILSNSEEREF 239 (288)
T ss_pred ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHH-----HHHhhhcCCCCCcCCCcCCCcc
Confidence 111233346778877654 68889999999999999999999986433110 0111111110 00001111223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..++.+++.+||+.||++|||++||++.
T Consensus 240 ~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 240 SPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 4567899999999999999999999863
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-33 Score=324.85 Aligned_cols=242 Identities=20% Similarity=0.223 Sum_probs=191.0
Q ss_pred chhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 694 TECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
.....||.|.||.||.|+ ..+|...|||-++... .....+.+|..++..++|||+|+++|+-.+++.++|.||||+
T Consensus 1238 qrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~ 1317 (1509)
T KOG4645|consen 1238 QRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCE 1317 (1509)
T ss_pred ccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhc
Confidence 466789999999999999 5689999999886532 235567899999999999999999999999999999999999
Q ss_pred CCChhHHhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC----
Q 002186 770 NGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---- 843 (955)
Q Consensus 770 ~gsL~~~l~~~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~---- 843 (955)
+|+|.+.+... .+..-...+..|++.|++|||++ +||||||||+||+||.+|.+|.+|||.|.........
T Consensus 1318 ~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~e 1394 (1509)
T KOG4645|consen 1318 GGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGE 1394 (1509)
T ss_pred cCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCchhcCCHH
Confidence 99999999764 34444456788999999999999 9999999999999999999999999998766543311
Q ss_pred --CcccccccCchhhhhccC---CcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 844 --FPAKIAWTESGEFYNAMK---EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 844 --~~~~~~~~~~~e~~~~~~---~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
...+++.|++||++.+.+ ...+.||||+|||++||+||++|+..-++ .|.+...+...-.| ..++..
T Consensus 1395 l~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn--e~aIMy~V~~gh~P------q~P~~l 1466 (1509)
T KOG4645|consen 1395 LQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN--EWAIMYHVAAGHKP------QIPERL 1466 (1509)
T ss_pred HHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc--hhHHHhHHhccCCC------CCchhh
Confidence 123667788888876533 45568999999999999999999874432 23332222111111 112235
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..+-.+++.+|++.||++|-++.|+++.
T Consensus 1467 s~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1467 SSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred hHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 5667889999999999999999888764
|
|
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-31 Score=285.00 Aligned_cols=243 Identities=21% Similarity=0.266 Sum_probs=187.8
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-------chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
..+.+|+|++|.||+|.. .+|+.||+|.++... ...+.+.+|++.+++++|||||++++++.+.+..++|||
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e 83 (268)
T cd06630 4 KGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVE 83 (268)
T ss_pred ccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEe
Confidence 667899999999999984 689999999986432 124567889999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-CceECcccccccccccCCC
Q 002186 767 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 767 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~-~~ki~DfGl~~~~~~~~~~ 843 (955)
|+++++|.+++.+ ..++.....++.|++.|++|||+. +++||||||+||+++.++ .+|++|||.+.........
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 160 (268)
T cd06630 84 WMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG 160 (268)
T ss_pred ccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence 9999999999965 457788889999999999999998 999999999999998775 5999999998654322110
Q ss_pred ------CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 844 ------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 844 ------~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
...+...+.+||......++.++||||+||++|||++|+.|+......... ....+..... ........
T Consensus 161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~ 235 (268)
T cd06630 161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL---ALIFKIASAT--TAPSIPEH 235 (268)
T ss_pred CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH---HHHHHHhccC--CCCCCchh
Confidence 111233467888887778889999999999999999999998633211100 0000100000 00111123
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....+.+++.+|+..+|++|||+.|+++
T Consensus 236 ~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 236 LSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred hCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 3466788999999999999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=289.90 Aligned_cols=241 Identities=15% Similarity=0.264 Sum_probs=188.7
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
....||+|+||.||+|.. .+|..||||++.... .....+.+|+..+++++||||+++++++...+..++||||+++++
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence 456799999999999986 589999999986433 235568889999999999999999999999999999999999999
Q ss_pred hhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccccc
Q 002186 773 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIA 849 (955)
Q Consensus 773 L~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~~ 849 (955)
|.+++.. ..++.....++.|++.|++|||+. +|+||||||+||+++.++.++++|||++........ ....+..
T Consensus 104 L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 180 (292)
T cd06657 104 LTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 180 (292)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCc
Confidence 9998865 568888899999999999999998 999999999999999999999999998764432211 1112345
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
.+.+||+.....++.++|||||||++|||+||+.|+........ . ........+. . .........+.+++.+|
T Consensus 181 ~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~--~-~~~~~~~~~~-~---~~~~~~~~~l~~li~~~ 253 (292)
T cd06657 181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--M-KMIRDNLPPK-L---KNLHKVSPSLKGFLDRL 253 (292)
T ss_pred cccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--H-HHHHhhCCcc-c---CCcccCCHHHHHHHHHH
Confidence 57788988777888999999999999999999999864321110 0 0011111111 0 01112234567888899
Q ss_pred cCCCCCCCCCHHHHHH
Q 002186 930 TRSTPSDRPSMEEALK 945 (955)
Q Consensus 930 l~~dp~~RPt~~ev~~ 945 (955)
|+.||.+||+++|+++
T Consensus 254 l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 254 LVRDPAQRATAAELLK 269 (292)
T ss_pred HhCCcccCcCHHHHhc
Confidence 9999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=277.14 Aligned_cols=253 Identities=19% Similarity=0.200 Sum_probs=184.3
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHh--ccCCCCceeEeEEEEcC----CeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIG--TVRHKNLIRLLGFCYNR----HQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~--~l~H~niv~l~g~~~~~----~~~~lv~ey~ 768 (955)
..+.||+|.||+|++|.. .|+.||||++... +.+.+.+|.++.+ .+||+||..+++.-..+ .+.+||.||-
T Consensus 215 L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr--dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYH 291 (513)
T KOG2052|consen 215 LQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR--DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYH 291 (513)
T ss_pred EEEEecCccccceeeccc-cCCceEEEEeccc--chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecc
Confidence 667899999999999998 5889999999743 3455666666665 57999999999886543 2789999999
Q ss_pred CCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhc-----CCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 769 PNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHH-----DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 769 ~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~-----~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
+.|||+|+|.+ .++....++++..+|.||+|||. ...|.|.|||||+.|||+.+++.+-|+|+|+|........
T Consensus 292 e~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~ 371 (513)
T KOG2052|consen 292 EHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTD 371 (513)
T ss_pred cCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCC
Confidence 99999999976 56888889999999999999995 3468999999999999999999999999999865433211
Q ss_pred ------CCcccccccCchhhhhcc-CC----c-ccccchhHHHHHHHHHhCC----------CCCCCCCC--CC-Ccccc
Q 002186 843 ------SFPAKIAWTESGEFYNAM-KE----E-MYMDVYGFGEIILEILTNG----------RLTNAGSS--LQ-NKPID 897 (955)
Q Consensus 843 ------~~~~~~~~~~~~e~~~~~-~~----~-~~~DV~S~Gvvl~Elltg~----------~p~~~~~~--~~-~~~~~ 897 (955)
....++..|++||+.... .. + ..+||||||.|+||++-+. .||++-.+ .. +....
T Consensus 372 ~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrk 451 (513)
T KOG2052|consen 372 TIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRK 451 (513)
T ss_pred cccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhc
Confidence 123456668888877542 11 1 2279999999999998742 24432111 00 00000
Q ss_pred ccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 898 GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
....+-+.|. ++..-...+.+..+.++|..||..+|+.|-|+=.+-+.|.++.
T Consensus 452 VVCv~~~RP~-ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 452 VVCVQKLRPN-IPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred ceeecccCCC-CCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 0001111111 1000112456788899999999999999999988888877665
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-31 Score=286.41 Aligned_cols=238 Identities=15% Similarity=0.125 Sum_probs=182.6
Q ss_pred ccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 699 AARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 699 ~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
||+|+||+||+|.. .+|+.||+|.+.... ...+.+.+|++++++++||||+++++++...+..|+||||+++|+|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999984 579999999986432 1234567899999999999999999999999999999999999999
Q ss_pred hHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-CCcccc
Q 002186 774 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPAKI 848 (955)
Q Consensus 774 ~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-~~~~~~ 848 (955)
.+++.. ..++.+...++.|+++|+.|||+. +|+||||||+||+++.++.+|++|||++........ ....+.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 157 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGT 157 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCC
Confidence 999865 357888889999999999999998 999999999999999999999999998865432111 111233
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..+.+||+..+..++.++||||+||++|||++|+.||........ ...+...........+ ......+.+++.+
T Consensus 158 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~li~~ 231 (277)
T cd05577 158 PGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE---KEELKRRTLEMAVEYP---DKFSPEAKDLCEA 231 (277)
T ss_pred CCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc---HHHHHhccccccccCC---ccCCHHHHHHHHH
Confidence 447788988777788999999999999999999999864332111 0001010001101111 1223457788999
Q ss_pred ccCCCCCCCC-----CHHHHHH
Q 002186 929 CTRSTPSDRP-----SMEEALK 945 (955)
Q Consensus 929 Cl~~dp~~RP-----t~~ev~~ 945 (955)
||+.||++|| ++.++++
T Consensus 232 ~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 232 LLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HccCChhHccCCCcccHHHHHh
Confidence 9999999999 6666654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=289.47 Aligned_cols=237 Identities=16% Similarity=0.137 Sum_probs=187.6
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|++|.||++.. .+++.||||.+.... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 5 ~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (290)
T cd05580 5 FIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVP 84 (290)
T ss_pred EEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCC
Confidence 668899999999999985 478999999986532 234567889999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccc
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 847 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~ 847 (955)
+|+|.+++.. .++...+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... ....+
T Consensus 85 ~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~-~~~~~ 160 (290)
T cd05580 85 GGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT-YTLCG 160 (290)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCCC-CCCCC
Confidence 9999999865 457888889999999999999998 99999999999999999999999999987654332 12223
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
...|.+||.......+.++|||||||++|||+||+.|+...... .......... ...+.. ....+.+++.
T Consensus 161 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~~~~---~~~~l~~li~ 230 (290)
T cd05580 161 TPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI------QIYEKILEGK-VRFPSF---FSPDAKDLIR 230 (290)
T ss_pred CccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHhcCC-ccCCcc---CCHHHHHHHH
Confidence 44577888887777888999999999999999999998643311 0011111111 111111 1345678889
Q ss_pred HccCCCCCCCC-----CHHHHHH
Q 002186 928 LCTRSTPSDRP-----SMEEALK 945 (955)
Q Consensus 928 ~Cl~~dp~~RP-----t~~ev~~ 945 (955)
+||..||++|| +++|+++
T Consensus 231 ~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 231 NLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred HHccCCHHHccCcccCCHHHHHc
Confidence 99999999999 7777764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=289.78 Aligned_cols=247 Identities=19% Similarity=0.234 Sum_probs=181.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|.. .+|+.||||.++.... ....+.+|++.+++++|+||+++++++.+++..++||||++ +
T Consensus 9 ~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~ 87 (291)
T cd07870 9 NLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-T 87 (291)
T ss_pred EEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-C
Confidence 678899999999999985 5789999999865322 23456789999999999999999999999999999999996 6
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcc
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPA 846 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~ 846 (955)
++.+++.. ...+.+...++.|+++||+|||+. +|+||||||+||+++.++++||+|||+++....... ....
T Consensus 88 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 164 (291)
T cd07870 88 DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEV 164 (291)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCcc
Confidence 77777643 356777888999999999999998 999999999999999999999999999865322211 1112
Q ss_pred cccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc----------cccc------ccccccccccc
Q 002186 847 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK----------PIDG------LLGEMYNENEV 909 (955)
Q Consensus 847 ~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~----------~~~~------~~~~~~~~~~~ 909 (955)
....+.+||...+ ..++.++|||||||++|||+||+.||......... +... ...........
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (291)
T cd07870 165 VTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFL 244 (291)
T ss_pred ccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhcc
Confidence 3345777887654 35778899999999999999999998643211000 0000 00000000000
Q ss_pred C-CCCchH------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 910 G-SSSSLQ------DEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 910 ~-~~~~~~------~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
. ...... .....+.+++.+|++.||++|||++|++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 245 PCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0 000000 11345678899999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-32 Score=266.20 Aligned_cols=243 Identities=16% Similarity=0.189 Sum_probs=182.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
....+|.|..|+|.|++. .+|..+|||.+..... +.+.+...+.++.+- ..|.||+.+|||..+..+++.||.|.
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs- 174 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS- 174 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-
Confidence 667899999999999984 5799999999976432 334445556655443 37999999999999999999999985
Q ss_pred CChhHHhhc-CCCHHHHH--HHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc-cCCCCcc
Q 002186 771 GNLSEKIRT-KRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL-ADGSFPA 846 (955)
Q Consensus 771 gsL~~~l~~-~~~~~~~~--~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~-~~~~~~~ 846 (955)
...+.++++ +.+.+++. ++.+.+.+||.||...+ +|||||+||+|||+|..|++|+||||++..... ...+..+
T Consensus 175 ~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsA 252 (391)
T KOG0983|consen 175 TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSA 252 (391)
T ss_pred HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccccccccc
Confidence 355565554 34455553 78888999999999875 899999999999999999999999999865433 3334455
Q ss_pred cccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 847 KIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 847 ~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
+.+.|++||... ..+|+.++|||||||.++|++||+.|+..-.. . .+.+..+.+..+.. .+........+.
T Consensus 253 GC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t-d----Fe~ltkvln~ePP~-L~~~~gFSp~F~ 326 (391)
T KOG0983|consen 253 GCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT-D----FEVLTKVLNEEPPL-LPGHMGFSPDFQ 326 (391)
T ss_pred CCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc-c----HHHHHHHHhcCCCC-CCcccCcCHHHH
Confidence 777788888664 34788889999999999999999999874211 1 12233344433221 121122456677
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
++...|+..|+.+||...+++++
T Consensus 327 ~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 327 SFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred HHHHHHhhcCcccCcchHHHhcC
Confidence 88889999999999999998764
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=291.40 Aligned_cols=239 Identities=18% Similarity=0.193 Sum_probs=188.7
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
....||+|.|++|..|+. .+|..||||.+++.+. ..+.+.+|+++|..++|||||+++.+.+.+...|+||||+.+
T Consensus 60 i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ 139 (596)
T KOG0586|consen 60 IIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASG 139 (596)
T ss_pred eeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccC
Confidence 778899999999999984 5899999999987543 234478999999999999999999999999999999999999
Q ss_pred CChhHHhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-CCccc
Q 002186 771 GNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPAK 847 (955)
Q Consensus 771 gsL~~~l~~~~--~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-~~~~~ 847 (955)
|.+++++.+.. .......++.|+..|++|+|++ .|+|||||++|||||.++++||+|||++..+..... ....+
T Consensus 140 ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cg 216 (596)
T KOG0586|consen 140 GELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCG 216 (596)
T ss_pred chhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecccccccccCC
Confidence 99999998743 2345567889999999999999 999999999999999999999999999977654322 22335
Q ss_pred ccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
.+.|++||++.+.++ ++++|+||+|||+|-|+.|.-||++..-.. .........+.-+. -...++.+++
T Consensus 217 sppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~-Lr~rvl~gk~rIp~---------~ms~dce~lL 286 (596)
T KOG0586|consen 217 SPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE-LRPRVLRGKYRIPF---------YMSCDCEDLL 286 (596)
T ss_pred CCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc-ccchheeeeecccc---------eeechhHHHH
Confidence 666899999988654 677999999999999999999998533211 00011111111111 1123455667
Q ss_pred HHccCCCCCCCCCHHHHHHH
Q 002186 927 LLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+.+..+|.+|++++++.+.
T Consensus 287 rk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 287 RKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred HHhhccCccccCCHHHhhhh
Confidence 77788899999999999864
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-31 Score=287.33 Aligned_cols=247 Identities=19% Similarity=0.160 Sum_probs=181.7
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccC-CCCceeEeEEEEcC--CeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNR--HQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~--~~~~lv~ey~ 768 (955)
..+.+|+|+||.||+|+. .+++.||||+++... .......+|+..+.++. ||||+++++++.++ +..++||||+
T Consensus 3 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~ 82 (282)
T cd07831 3 ILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELM 82 (282)
T ss_pred eEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecC
Confidence 567799999999999985 578999999987532 22233456788888885 99999999999987 8899999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 844 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~- 844 (955)
+ |++.+.+.. ..+|.+...++.|+++||+|||+. +|+||||||+||+++. +.+||+|||+++.........
T Consensus 83 ~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~ 157 (282)
T cd07831 83 D-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTE 157 (282)
T ss_pred C-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCCCcCC
Confidence 7 688888864 468999999999999999999998 9999999999999999 999999999987543322211
Q ss_pred cccccccCchhhhh-ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc--------cccccccc---------c
Q 002186 845 PAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID--------GLLGEMYN---------E 906 (955)
Q Consensus 845 ~~~~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~--------~~~~~~~~---------~ 906 (955)
..+..++.+||... ....+.++||||+||++|||++|+.||............ ....+... +
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07831 158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFP 237 (282)
T ss_pred CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCc
Confidence 12344577788654 345688999999999999999999988643211000000 00000000 0
Q ss_pred cccC--CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 907 NEVG--SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 907 ~~~~--~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.... ...........+.+++.+||+.+|++|||++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 238 SKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0000 000011235678899999999999999999999863
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=285.46 Aligned_cols=240 Identities=16% Similarity=0.123 Sum_probs=188.9
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.+|.|+||.||+|... +|+.||+|.+.... ...+.+.+|++.+++++||||+++++++.+++..++||||++
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 83 (258)
T cd05578 4 LLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLL 83 (258)
T ss_pred EEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCC
Confidence 6778999999999999965 69999999997532 235678899999999999999999999999999999999999
Q ss_pred CCChhHHhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-CCcc
Q 002186 770 NGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 846 (955)
Q Consensus 770 ~gsL~~~l~~~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-~~~~ 846 (955)
+++|.+++... +++.+...++.|+++||+|||+. +|+|+||||+||+++.++.+|++|||++........ ....
T Consensus 84 ~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 160 (258)
T cd05578 84 GGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS 160 (258)
T ss_pred CCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccC
Confidence 99999999754 67788889999999999999998 999999999999999999999999999765433211 1122
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
+...+.+||+......+.++||||+||++|||+||+.|+............. ...... . .........+.+++
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~-~---~~~~~~~~~~~~~i 233 (258)
T cd05578 161 GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRA---KQETAD-V---LYPATWSTEAIDAI 233 (258)
T ss_pred CChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHH---Hhcccc-c---cCcccCcHHHHHHH
Confidence 3444678898887788999999999999999999999987443211000001 110011 1 11112235677899
Q ss_pred HHccCCCCCCCCCH--HHHH
Q 002186 927 LLCTRSTPSDRPSM--EEAL 944 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~--~ev~ 944 (955)
.+||+.||.+||++ +|++
T Consensus 234 ~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 234 NKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HHHccCChhHcCCccHHHHh
Confidence 99999999999999 6654
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-31 Score=289.20 Aligned_cols=251 Identities=18% Similarity=0.192 Sum_probs=185.9
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccch---HHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAY 762 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~ 762 (955)
+.|. ..+.||+|+||.||+|... +|+.||+|.++..... ...+.+|++++++++||||+++++++... +..|
T Consensus 5 ~~y~--~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 5 DEYE--KLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhh--hhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 3455 7889999999999999965 6899999999754322 33567899999999999999999999877 8899
Q ss_pred EEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
+||||++ ++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 83 lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred EEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 9999997 599988864 368889999999999999999998 999999999999999999999999999875543
Q ss_pred cCCC--CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------cccccccc
Q 002186 840 ADGS--FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLG 901 (955)
Q Consensus 840 ~~~~--~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~ 901 (955)
.... ...+...+.+||...+. ..+.++||||+||++|||++|+.|+........ |.....+.
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred CccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence 2111 11233446778876543 468899999999999999999998864321100 00000000
Q ss_pred ccc----c-ccccCCCCchHH--HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 902 EMY----N-ENEVGSSSSLQD--EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 902 ~~~----~-~~~~~~~~~~~~--~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
... . ..........+. ....+.+++.+|++.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000 0 000000000111 2455778999999999999999999985
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=292.55 Aligned_cols=258 Identities=20% Similarity=0.283 Sum_probs=186.0
Q ss_pred cchhhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEc
Q 002186 682 FTANDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYN 757 (955)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 757 (955)
+...+..+.|. ....+|+|+||.||+|.. .+|+.||||++..... ....+.+|++++++++||||++++++|..
T Consensus 5 ~~~~~~~~~y~--~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 82 (310)
T cd07865 5 FPFCDEVSKYE--KLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 82 (310)
T ss_pred CcccchhhheE--EEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEec
Confidence 44445556677 788999999999999995 4799999999864321 23345678999999999999999999876
Q ss_pred CC--------eeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCc
Q 002186 758 RH--------QAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826 (955)
Q Consensus 758 ~~--------~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ 826 (955)
.+ ..++||||++ +++.+.+.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~ 158 (310)
T cd07865 83 KATPYNRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGIL 158 (310)
T ss_pred ccccccCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcE
Confidence 54 4599999996 588888765 458888999999999999999998 99999999999999999999
Q ss_pred eECcccccccccccCCC------CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccc
Q 002186 827 HLAEFGFKYLTQLADGS------FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGL 899 (955)
Q Consensus 827 ki~DfGl~~~~~~~~~~------~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~ 899 (955)
||+|||++......... .......|.+||..... .++.++|||||||++|||+||+.|+..............
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~ 238 (310)
T cd07865 159 KLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQ 238 (310)
T ss_pred EECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 99999998654322111 11123446778876543 467889999999999999999988764322110000000
Q ss_pred cc--------------ccccccccCCC--CchH------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 900 LG--------------EMYNENEVGSS--SSLQ------DEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 900 ~~--------------~~~~~~~~~~~--~~~~------~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+. ...+....... .... .....+.+++.+||..||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 239 LCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 00 00000000000 0000 01235678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-31 Score=285.56 Aligned_cols=248 Identities=21% Similarity=0.240 Sum_probs=187.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|+|++|.||+|.. .+|+.||||++.... ...+.+.+|+.++++++||||+++++++...+..++||||+ +
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~ 82 (286)
T cd07832 4 ILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-P 82 (286)
T ss_pred EEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-C
Confidence 567899999999999995 478999999997543 22457889999999999999999999999999999999999 9
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---CC
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---SF 844 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~---~~ 844 (955)
++|.+++.. ..++.++..++.|+++||+|||+. +|+|+||||+||+++.++.+|++|||++........ ..
T Consensus 83 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (286)
T cd07832 83 SDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSH 159 (286)
T ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcccc
Confidence 999999864 467888999999999999999998 999999999999999999999999999876543221 11
Q ss_pred cccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------ccccccc---ccccc
Q 002186 845 PAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLL---GEMYN 905 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~---~~~~~ 905 (955)
..+..++.+||..... .++.++||||+||++|||+||..|+........ |+..... .....
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T cd07832 160 QVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITF 239 (286)
T ss_pred ccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccC
Confidence 2244557788876543 468899999999999999999766643221100 0000000 00000
Q ss_pred cccc--CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 906 ENEV--GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 906 ~~~~--~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+... ......++....+.+++.+|+..||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 240 PESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000 0000001223678899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-31 Score=284.48 Aligned_cols=239 Identities=12% Similarity=0.061 Sum_probs=179.3
Q ss_pred hccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHH---HHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 698 EAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFI---TRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~---~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
.||+|+||.||+|.. .+|+.||+|.+..... ....+.+|. +.++...||||+++++++.+++..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 479999999999985 5789999999865321 122233333 33445679999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccc
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 847 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~ 847 (955)
+|+|.+++.. .+++.++..++.|+++|++|||+. +|+||||||+||+++.++.+|++|||++............+
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 157 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 157 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCC
Confidence 9999998865 468999999999999999999998 99999999999999999999999999986543322222234
Q ss_pred ccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||.... ..++.++||||+||++|||++|+.||............... ...... . . ......+.+++
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~-~--~---~~~s~~~~~li 230 (278)
T cd05606 158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT-LTMAVE-L--P---DSFSPELRSLL 230 (278)
T ss_pred CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh-hccCCC-C--C---CcCCHHHHHHH
Confidence 455778888764 46788999999999999999999998754221110000000 000000 1 1 11235677888
Q ss_pred HHccCCCCCCCC-----CHHHHHHH
Q 002186 927 LLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 927 ~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
.+|+..+|++|| +++|++++
T Consensus 231 ~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 231 EGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred HHHhhcCHHhccCCCCCCHHHHHhC
Confidence 999999999999 99999863
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=290.82 Aligned_cols=247 Identities=20% Similarity=0.197 Sum_probs=181.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccC-CCCceeEeEEEEcCCe-----eEEE
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQ-----AYLL 764 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~-----~~lv 764 (955)
..+.+|+|+||.||+|.. .+|+.||||+++.... ....+.+|++++++++ ||||+++++++...+. .|+|
T Consensus 5 ~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv 84 (295)
T cd07837 5 KLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLV 84 (295)
T ss_pred EeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEE
Confidence 678899999999999995 4799999999865322 2356778999999995 6999999999987655 8999
Q ss_pred EeecCCCChhHHhhc-------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-CCCceECccccccc
Q 002186 765 YDYLPNGNLSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYL 836 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~-------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-~~~~ki~DfGl~~~ 836 (955)
|||+++ +|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++. ++.+|++|||+++.
T Consensus 85 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 85 FEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred eeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 999985 89888753 247888899999999999999998 9999999999999998 88999999999875
Q ss_pred ccccCCC--CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc---------------ccc
Q 002186 837 TQLADGS--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP---------------IDG 898 (955)
Q Consensus 837 ~~~~~~~--~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~---------------~~~ 898 (955)
....... ......++.+||+... ..++.++|||||||++|||+||+.||.......... ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence 4322211 1123445778887654 457889999999999999999998886432211000 000
Q ss_pred cccccc-ccccc--CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 899 LLGEMY-NENEV--GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 899 ~~~~~~-~~~~~--~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...... .+... ......+....++.+++.+|+..||++||+++|++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 241 KLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000 00000 000000123456788999999999999999999975
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-31 Score=282.10 Aligned_cols=237 Identities=16% Similarity=0.141 Sum_probs=185.7
Q ss_pred ccCCCCCceEEEeCC-CCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 699 AARPQSAAGCKAVLP-TGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 699 ~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
||.|++|.||+|+.. +|+.||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999964 58999999987532 2346688899999999999999999999999999999999999999
Q ss_pred hHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-CCcccccc
Q 002186 774 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPAKIAW 850 (955)
Q Consensus 774 ~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-~~~~~~~~ 850 (955)
.+++.+ ..++.....++.|++.|++|+|+. +++|+||||+||+++.++.+|++|||+++....... ....+...
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 157 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE 157 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence 999976 357778889999999999999998 999999999999999999999999999876543211 11123445
Q ss_pred cCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccc-ccccCCCCchHHHHHHHHHHHHHc
Q 002186 851 TESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN-ENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 851 ~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
+.+||......++.++||||+||++|||++|+.|+....... ......... ......+. .....+.+++.+|
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~ 230 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIYNDILKGNGKLEFPN---YIDKAAKDLIKQL 230 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHHHHHhccCCCCCCCc---ccCHHHHHHHHHH
Confidence 778888877788899999999999999999999987543211 011111111 01011111 1145678999999
Q ss_pred cCCCCCCCCC-----HHHHHH
Q 002186 930 TRSTPSDRPS-----MEEALK 945 (955)
Q Consensus 930 l~~dp~~RPt-----~~ev~~ 945 (955)
|+.+|++||+ ++|+++
T Consensus 231 l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 231 LRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ccCChhhCcCCcccCHHHHhc
Confidence 9999999999 666654
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-31 Score=289.41 Aligned_cols=239 Identities=21% Similarity=0.264 Sum_probs=185.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.+|+|+||.||+|+. .+|..||+|++.... .....+.+|++.+++++|||+|+++++|.+++..++||||++
T Consensus 29 ~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 108 (317)
T cd06635 29 DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL 108 (317)
T ss_pred hhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC
Confidence 778899999999999995 478999999986432 123467889999999999999999999999999999999997
Q ss_pred CCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCcc
Q 002186 770 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA 846 (955)
Q Consensus 770 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~ 846 (955)
|++.+.+.. ..+|.++..++.|++.|+.|||+. +|+||||||+||+++.++.+|++|||++....... ...
T Consensus 109 -g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~ 182 (317)
T cd06635 109 -GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPAN--SFV 182 (317)
T ss_pred -CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCcc--ccc
Confidence 588777743 468899999999999999999998 99999999999999999999999999876543221 122
Q ss_pred cccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 847 KIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 847 ~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
+...|.+||+.. ...++.++|||||||++|||++|+.|+....... ............ .........+.
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~l~ 254 (317)
T cd06635 183 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQNESPT--LQSNEWSDYFR 254 (317)
T ss_pred CCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHHhccCCC--CCCccccHHHH
Confidence 344577888763 3457889999999999999999999986432111 000111111000 00112234577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHh
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLL 947 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L 947 (955)
+++.+|++.+|.+||++.|+++..
T Consensus 255 ~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 255 NFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred HHHHHHccCCcccCcCHHHHHhCh
Confidence 889999999999999999999754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=291.69 Aligned_cols=248 Identities=19% Similarity=0.236 Sum_probs=187.7
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|++|.||+|... +|+.||||+++... ...+.+.+|++++++++|+||+++++++..++..++||||+++
T Consensus 5 ~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~ 84 (288)
T cd07833 5 VLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVER 84 (288)
T ss_pred EEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCC
Confidence 6778999999999999965 68899999986532 2346788999999999999999999999999999999999998
Q ss_pred CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---CCc
Q 002186 771 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---SFP 845 (955)
Q Consensus 771 gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~---~~~ 845 (955)
+.+..+... ..++.+...++.|+++|++|||+. +|+|||+||+||++++++.+||+|||++........ ...
T Consensus 85 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 161 (288)
T cd07833 85 TLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDY 161 (288)
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCc
Confidence 777766654 467888899999999999999998 999999999999999999999999999876543321 111
Q ss_pred ccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCC-ccccc-----------c--cccccccccc-
Q 002186 846 AKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN-KPIDG-----------L--LGEMYNENEV- 909 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~-~~~~~-----------~--~~~~~~~~~~- 909 (955)
.+..++.+||+..+. .++.++|||||||++|||++|+.|+........ +.... . ....+.....
T Consensus 162 ~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (288)
T cd07833 162 VATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFP 241 (288)
T ss_pred ccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccC
Confidence 234557888988776 788999999999999999999988764321100 00000 0 0000000000
Q ss_pred CC-CCc------hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 910 GS-SSS------LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 910 ~~-~~~------~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.. ... ......++.+++.+||..+|++|||++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 242 EPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00 000 0112466889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=286.07 Aligned_cols=238 Identities=17% Similarity=0.190 Sum_probs=184.5
Q ss_pred ccCCCCCceEEEeCC-CCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 699 AARPQSAAGCKAVLP-TGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 699 ~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
+|.|+||.||+++.. +|+.||+|.+..... ..+.+.+|++.+++++||||+++++.+.+.+..|+||||+++|+|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999976 599999999865432 355678899999999999999999999999999999999999999
Q ss_pred hHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---------
Q 002186 774 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--------- 842 (955)
Q Consensus 774 ~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--------- 842 (955)
.+++++ ..++..+..++.|+++||+|||+. +++||||+|+||+++.++.+|++|||++........
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 999975 468888999999999999999998 999999999999999999999999999765332211
Q ss_pred -CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 843 -SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 843 -~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
........+.+||.......+.++|||||||++||++||+.|+...... .......... ..... .......
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~~~-~~~~~~~ 229 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE------EIFQNILNGK-IEWPE-DVEVSDE 229 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHhcCC-cCCCc-cccCCHH
Confidence 1111233467788877777888999999999999999999998643311 0111111100 00011 1112456
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHh
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLL 947 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L 947 (955)
+.+++.+||+.+|++|||+.++.+.|
T Consensus 230 ~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 230 AIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 78899999999999999995555444
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-31 Score=290.44 Aligned_cols=245 Identities=17% Similarity=0.142 Sum_probs=178.9
Q ss_pred hccCCCCCceEEEeCCCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 698 EAARPQSAAGCKAVLPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..|.|+++.||++.. +|+.||||+++.. ....+.+.+|++.+++++||||+++++++...+..+++|||+++|+|.
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE 87 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence 344555555566655 8999999998754 234567889999999999999999999999999999999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--------
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-------- 842 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-------- 842 (955)
++++. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||.+........
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~ 164 (314)
T cd08216 88 DLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDF 164 (314)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccccccccc
Confidence 99975 356777788999999999999998 999999999999999999999999998754322111
Q ss_pred -CCcccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc--cccc----------------cc
Q 002186 843 -SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP--IDGL----------------LG 901 (955)
Q Consensus 843 -~~~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~--~~~~----------------~~ 901 (955)
........|.+||+... ..++.++|||||||++|||++|+.||.......... .... ..
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
T cd08216 165 PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMS 244 (314)
T ss_pred cccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcC
Confidence 01112334677887754 357889999999999999999999987432111000 0000 00
Q ss_pred c----ccccccc--CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 902 E----MYNENEV--GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 902 ~----~~~~~~~--~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
. ..++... ...........++.+++.+||..||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 245 QSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0 0000000 0000112234567889999999999999999999863
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=289.39 Aligned_cols=246 Identities=19% Similarity=0.219 Sum_probs=181.2
Q ss_pred hhccCC--CCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 697 EEAARP--QSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 697 ~~~g~g--~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..||+| +||+||+|.. .+|+.||||.+..... ..+.+.+|+.+++.++|||||+++++|...+..++||||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 467777 8889999985 5899999999875322 346778899999999999999999999999999999999999
Q ss_pred CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC---
Q 002186 771 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 843 (955)
Q Consensus 771 gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--- 843 (955)
|++.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+|++||+.+.........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 999999875 357778889999999999999988 9999999999999999999999999854322111000
Q ss_pred ------CcccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc----------cc-c------
Q 002186 844 ------FPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP----------ID-G------ 898 (955)
Q Consensus 844 ------~~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~----------~~-~------ 898 (955)
.......|.+||+... ..++.++|||||||++|||++|+.||.......... .. .
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 0111223567787754 346789999999999999999999986432100000 00 0
Q ss_pred -------------ccccccc--------ccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 899 -------------LLGEMYN--------ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 899 -------------~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....... .... ..+........+.+++.+||+.||++|||++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERL-RTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhhccchhhhhcccccchhccccccccccccc-cchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0000000 0000 011112345678899999999999999999999853
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-31 Score=291.25 Aligned_cols=240 Identities=17% Similarity=0.121 Sum_probs=187.9
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|++|.||+|... +|+.||+|.+..... ..+.+.+|++.+++++||||+++++++.+.+..++||||++
T Consensus 5 ~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (316)
T cd05574 5 KIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCP 84 (316)
T ss_pred EeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecC
Confidence 6678999999999999964 699999999975432 34567889999999999999999999999999999999999
Q ss_pred CCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 770 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 770 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
+|+|.+++.. ..++.....++.|+++||+|||.. +++||||||+||+++.++.++++|||++.........
T Consensus 85 ~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (316)
T cd05574 85 GGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS 161 (316)
T ss_pred CCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccccccccc
Confidence 9999999864 357888889999999999999998 9999999999999999999999999987643221100
Q ss_pred -----------------------------CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc
Q 002186 844 -----------------------------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK 894 (955)
Q Consensus 844 -----------------------------~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~ 894 (955)
...+...|.+||+..+..++.++|||||||++|||++|+.||.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-- 239 (316)
T cd05574 162 KALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE-- 239 (316)
T ss_pred cccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH--
Confidence 0012334678888887788999999999999999999999986433211
Q ss_pred cccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCC----HHHHHH
Q 002186 895 PIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS----MEEALK 945 (955)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt----~~ev~~ 945 (955)
...++.... .. .+........+.+++.+|++.||++||| ++|+++
T Consensus 240 ----~~~~~~~~~-~~-~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 240 ----TFSNILKKE-VT-FPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred ----HHHHHhcCC-cc-CCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 111111111 10 0111113466889999999999999999 777765
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=288.15 Aligned_cols=247 Identities=20% Similarity=0.242 Sum_probs=184.7
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|+|++|.||+|.. .+|..||||++..... ..+.+.+|++.+++++||||+++++++.+.+..++||||++
T Consensus 3 ~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~- 81 (283)
T cd07835 3 KVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD- 81 (283)
T ss_pred hheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-
Confidence 567899999999999985 4899999999875322 23567789999999999999999999999999999999995
Q ss_pred CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--C
Q 002186 771 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--F 844 (955)
Q Consensus 771 gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~ 844 (955)
++|.+++.. ..++..+..++.|+++||+|||+. +++||||+|+||+++.++.+|++|||+++........ .
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 82 LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence 799998865 357899999999999999999998 9999999999999999999999999998654322111 1
Q ss_pred cccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------ccccccccccccccc
Q 002186 845 PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLGEMYNENE 908 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~~~~~~~~ 908 (955)
......+.+||+... ..++.++|||||||++|||+||+.||........ |.......+.....+
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP 238 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence 122445678887654 3468889999999999999999998864322100 000000000000000
Q ss_pred cCCCCc----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 909 VGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 909 ~~~~~~----~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...... .......+.+++.+|++.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000 0112356789999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=279.40 Aligned_cols=241 Identities=20% Similarity=0.263 Sum_probs=192.1
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ey~ 768 (955)
..+.||+|++|.||+|+.. +|+.||+|++.... ...+.+.+|++.+++++||||+++++++.+. +..++||||+
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 83 (260)
T cd06606 4 RGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYV 83 (260)
T ss_pred eeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEec
Confidence 5678999999999999965 79999999987644 3466788999999999999999999999988 8999999999
Q ss_pred CCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC----
Q 002186 769 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---- 842 (955)
Q Consensus 769 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~---- 842 (955)
++++|.+++.. ..++..+..++.|+++|++|||+. +++|+|++|+||+++.++.+||+|||.+........
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (260)
T cd06606 84 SGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT 160 (260)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence 99999999876 468899999999999999999998 999999999999999999999999999876544321
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
........+.+||.......+.++|||||||++|||++|+.|+........ ........... ..........+
T Consensus 161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~l 233 (260)
T cd06606 161 GSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA-----ALYKIGSSGEP--PEIPEHLSEEA 233 (260)
T ss_pred cCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-----HHHhccccCCC--cCCCcccCHHH
Confidence 112233446788888777789999999999999999999999875431110 00011100000 01111224567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.+++.+|++.||++||++.|+++
T Consensus 234 ~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 234 KDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHHHHHhCcCChhhCCCHHHHhh
Confidence 78889999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-31 Score=282.74 Aligned_cols=239 Identities=15% Similarity=0.101 Sum_probs=177.6
Q ss_pred hhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHH-HhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 697 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITR-IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
+.+|+|+||.||+|.. .+|+.||||.++.... ....+..|... ....+||||+++++++..++..|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4589999999999985 4789999999865321 12223334333 4456899999999999999999999999999
Q ss_pred CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCcccc
Q 002186 771 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKI 848 (955)
Q Consensus 771 gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~ 848 (955)
|+|.++++. ..++.....++.|+++||.|||+. +|+||||||+||+++.++.+|++|||+++...... ...+.
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~ 156 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENK--KFVGT 156 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccccc--cCCCC
Confidence 999999975 457788889999999999999998 99999999999999999999999999986543211 11233
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..|.+||...+..++.++|||||||++|||+||..|+....... . ......................+.+++.+
T Consensus 157 ~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 230 (260)
T cd05611 157 PDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA--V----FDNILSRRINWPEEVKEFCSPEAVDLINR 230 (260)
T ss_pred cCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH--H----HHHHHhcccCCCCcccccCCHHHHHHHHH
Confidence 44677888777778899999999999999999999986432211 0 00100000000001111234567899999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 002186 929 CTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~ 946 (955)
||+.||++||++.++.+.
T Consensus 231 ~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 231 LLCMDPAKRLGANGYQEI 248 (260)
T ss_pred HccCCHHHccCCCcHHHH
Confidence 999999999977544443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-31 Score=278.93 Aligned_cols=242 Identities=17% Similarity=0.258 Sum_probs=191.8
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..+.+|+|++|.||++... +|+.||+|++..... ..+.+.+|++.+++++||||+++++++..++..++|+||+++++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~ 83 (253)
T cd05122 4 ILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGS 83 (253)
T ss_pred eeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCc
Confidence 5678999999999999975 789999999976543 46678899999999999999999999999999999999999999
Q ss_pred hhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC-CCCcccc
Q 002186 773 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-GSFPAKI 848 (955)
Q Consensus 773 L~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~-~~~~~~~ 848 (955)
|.+++.. ..++.....++.|+++|++|||.. +++||||||+||+++.++.+||+|||.+....... .....+.
T Consensus 84 L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 160 (253)
T cd05122 84 LKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGT 160 (253)
T ss_pred HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecC
Confidence 9999865 458888999999999999999998 99999999999999999999999999987654332 1122234
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..+.+||+......+.++||||||+++|||++|+.|+........... ... ...... .........+.+++.+
T Consensus 161 ~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~-~~~~~~---~~~~~~~~~~~~~i~~ 233 (253)
T cd05122 161 PYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK---IAT-NGPPGL---RNPEKWSDEFKDFLKK 233 (253)
T ss_pred CcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH---HHh-cCCCCc---CcccccCHHHHHHHHH
Confidence 457788988877788999999999999999999998864321110000 000 000000 1111113567889999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 002186 929 CTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~ 946 (955)
|++.||++|||+.|++++
T Consensus 234 ~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 234 CLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred HccCChhhCCCHHHHhcC
Confidence 999999999999999753
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=294.77 Aligned_cols=259 Identities=22% Similarity=0.269 Sum_probs=189.2
Q ss_pred HhhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecc---cchHHHHHHHHHHHhcc-CCCCceeEeEEEEcC--C
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWG---ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR--H 759 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~--~ 759 (955)
+.+.|. ..+.+|+|+||.||+|... +|+.||||++... ......+.+|+++++++ +||||++++++|... .
T Consensus 5 ~~~~y~--~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 5 ILRKYE--ILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred hhhHHH--HhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence 345566 7889999999999999964 7889999998542 22344567899999999 999999999998754 3
Q ss_pred eeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
..++||||++ ++|.+++.. ..+|..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred eEEEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 6899999997 599998876 568888889999999999999998 99999999999999999999999999987543
Q ss_pred ccCCC-------CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-------------
Q 002186 839 LADGS-------FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID------------- 897 (955)
Q Consensus 839 ~~~~~-------~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~------------- 897 (955)
..... ...+..+|.+||.... ...+.++|||||||++|||+||+.||............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIE 238 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 32211 0113445677786543 45778899999999999999999988643211100000
Q ss_pred ----cccccccc----ccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhccC
Q 002186 898 ----GLLGEMYN----ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLK 951 (955)
Q Consensus 898 ----~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~~ 951 (955)
.......+ ..........+.....+.+++.+||+.||++|||+.|+++. ++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~ 302 (337)
T cd07852 239 SIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH 302 (337)
T ss_pred HHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence 00000000 00000000011124567899999999999999999999964 44443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=295.01 Aligned_cols=256 Identities=20% Similarity=0.249 Sum_probs=187.9
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcC-----C
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----H 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~ 759 (955)
++|. ....+|+|+||+||+|.. .+|+.||||+++.. ......+.+|+.++++++||||+++++++... .
T Consensus 5 ~~y~--~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 5 TKYV--PIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccee--EEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 3455 677899999999999984 58999999998652 22344567899999999999999999988654 3
Q ss_pred eeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
..++||||+. ++|.+++.. ..++.....++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 5799999996 789988865 457888899999999999999998 9999999999999999999999999998765
Q ss_pred cccCCC--CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------c--ccc
Q 002186 838 QLADGS--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------K--PID 897 (955)
Q Consensus 838 ~~~~~~--~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~--~~~ 897 (955)
...... ...+...+.+||.... ..++.++|||||||++|||++|+.||........ + ...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07858 159 SEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRN 238 (337)
T ss_pred CCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCc
Confidence 332111 1123445778887653 4588899999999999999999998864321000 0 000
Q ss_pred ccccccccccccCCCC----chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhcc
Q 002186 898 GLLGEMYNENEVGSSS----SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGL 950 (955)
Q Consensus 898 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~ 950 (955)
..........+..... ..+.....+.+++.+||+.||++|||++|+++. ++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 239 EKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 0000000000000000 011234567899999999999999999999976 5544
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-32 Score=292.06 Aligned_cols=242 Identities=18% Similarity=0.186 Sum_probs=187.6
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
....+|.|+||.||||+.. ++...|.|.+.... ...+.+.-||++|+..+||+||++++.|+.++..+|..|||+||-
T Consensus 36 IiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGA 115 (1187)
T KOG0579|consen 36 IIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGA 115 (1187)
T ss_pred HHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCch
Confidence 7778999999999999965 56667788886533 346778889999999999999999999999999999999999999
Q ss_pred hhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccc
Q 002186 773 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 847 (955)
Q Consensus 773 L~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~ 847 (955)
.+..+-. .+...+...+++|++.||.|||+. .|||||+|+.|||+.-+|.+|++|||.+........ ..-.+
T Consensus 116 VDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIG 192 (1187)
T KOG0579|consen 116 VDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIG 192 (1187)
T ss_pred HhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHHhhhccccC
Confidence 8887643 567888889999999999999999 999999999999999999999999998643221111 11126
Q ss_pred ccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 848 IAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 848 ~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
++|+++||+.. ..+|+.++|||||||.|.||.-+.+|..+-... . .+-.+....+. ..-.+......+
T Consensus 193 TPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM-----R-VllKiaKSePP-TLlqPS~Ws~~F 265 (1187)
T KOG0579|consen 193 TPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----R-VLLKIAKSEPP-TLLQPSHWSRSF 265 (1187)
T ss_pred CcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH-----H-HHHHHhhcCCC-cccCcchhhhHH
Confidence 77888887654 457999999999999999999988776432211 1 11122211111 011122334567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.++..+|+..||..||++.|++++
T Consensus 266 ~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 266 SDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HHHHHHHHhcCCccCCCHHHHhhC
Confidence 788889999999999999999874
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=294.25 Aligned_cols=195 Identities=18% Similarity=0.181 Sum_probs=164.2
Q ss_pred cccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcC------Cee
Q 002186 691 FNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------HQA 761 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------~~~ 761 (955)
+..+..+.+|+|+||.||+|+ ..+|+.||||.+.... ...+..-+|+++|++++|||||++++.-++. ...
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 444477889999999999999 6799999999997632 2466778999999999999999999986653 367
Q ss_pred EEEEeecCCCChhHHhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC--CCCC--ceECccc
Q 002186 762 YLLYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--ENME--PHLAEFG 832 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~--~~~~--~ki~DfG 832 (955)
.+|||||.+|||+..+.+ .++..+.+.+..+++.||.|||++ +|+||||||.||++- .+++ -|++|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 899999999999999986 568888899999999999999998 999999999999983 3343 6999999
Q ss_pred ccccccccCCCCc-ccccccCchhhhh-ccCCcccccchhHHHHHHHHHhCCCCCCCC
Q 002186 833 FKYLTQLADGSFP-AKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAG 888 (955)
Q Consensus 833 l~~~~~~~~~~~~-~~~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~ 888 (955)
.|+..+....... .++..|-.||.++ ...++.-+|.|||||++||.+||..||...
T Consensus 170 ~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 170 AARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred ccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 9997765443222 2566677888888 478888899999999999999999999843
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-31 Score=290.90 Aligned_cols=252 Identities=21% Similarity=0.276 Sum_probs=185.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccch---HHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAY 762 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~ 762 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||+|+++..... ...+.+|++++++++||||+++++++... +..+
T Consensus 7 ~~y~--~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 7 TEFE--KLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred ccee--EeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 3455 778899999999999996 57999999998753221 23456789999999999999999998764 5689
Q ss_pred EEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
+||||++ ++|.+++.. ..++.+...++.|+++|++|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 85 lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 85 LVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 9999997 588888764 468889999999999999999999 999999999999999999999999999876543
Q ss_pred cCCCC--cccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-ccc----cccc-------
Q 002186 840 ADGSF--PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLL----GEMY------- 904 (955)
Q Consensus 840 ~~~~~--~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~----~~~~------- 904 (955)
..... ......|.+||...+ ..++.++||||+||++|||++|+.||............ ... ....
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07845 161 PAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP 240 (309)
T ss_pred ccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccc
Confidence 22111 113445778887654 45788999999999999999999988643221100000 000 0000
Q ss_pred --cccccC--CCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 905 --NENEVG--SSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 905 --~~~~~~--~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...... ..... ......+.+++.+|++.||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred ccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000 00000 1124557789999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=296.12 Aligned_cols=252 Identities=20% Similarity=0.272 Sum_probs=185.7
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEcC-----Ce
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~ 760 (955)
++|. ..+.+|+|+||.||+|+ ..+|+.||||+++.. ......+.+|++++++++|||||++++++... ..
T Consensus 5 ~~y~--i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 5 PRYQ--NLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cceE--EEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 3455 77889999999999998 468999999998642 22345677899999999999999999987654 35
Q ss_pred eEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
.++||||++ +++.+.+.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 158 (336)
T cd07849 83 VYIVQELME-TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADP 158 (336)
T ss_pred EEEEehhcc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeeccc
Confidence 799999997 588888765 568888899999999999999998 999999999999999999999999999865432
Q ss_pred cCCC-----CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc---------ccccccc--
Q 002186 840 ADGS-----FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP---------IDGLLGE-- 902 (955)
Q Consensus 840 ~~~~-----~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~---------~~~~~~~-- 902 (955)
.... ...+...|.+||.... ..++.++||||+||++|||+||+.||........+. .......
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
T cd07849 159 EHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCII 238 (336)
T ss_pred cccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 2111 1123445678887543 467889999999999999999999886432110000 0000000
Q ss_pred ------cccccccCCCCc----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 903 ------MYNENEVGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 903 ------~~~~~~~~~~~~----~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.....+...... .+....++.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 239 SLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred chhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000000 01123568899999999999999999999975
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-32 Score=269.31 Aligned_cols=252 Identities=20% Similarity=0.253 Sum_probs=185.1
Q ss_pred cccchhhhccCCCCCceEEEeCC---C--CcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEc-CCee
Q 002186 691 FNSTECEEAARPQSAAGCKAVLP---T--GITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQA 761 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~~---~--g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~ 761 (955)
|.|+....||+|.||.||||+.. + .+.+|+|+++.... -....-+|+.+++.++|||||.+..++.. +..+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 44448889999999999999742 2 33799999975422 14566788999999999999999998877 7889
Q ss_pred EEEEeecCCCChhHHhhc-------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC----CCceECc
Q 002186 762 YLLYDYLPNGNLSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN----MEPHLAE 830 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~-------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~----~~~ki~D 830 (955)
++++||++. ||.+.|+- .++....+.|..||..|+.|||++ =|+|||+||+|||+..+ |.+||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeec
Confidence 999999986 89998864 234556678999999999999999 89999999999999877 8999999
Q ss_pred ccccccccccCC-----CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCC-CC-Ccccc-----
Q 002186 831 FGFKYLTQLADG-----SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSS-LQ-NKPID----- 897 (955)
Q Consensus 831 fGl~~~~~~~~~-----~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~-~~-~~~~~----- 897 (955)
+|+++.+...-. .....+-||.+||..-+ ..|+.++|||+.|||..||+|-++.|...+. .. ..+..
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 999987654321 12235678999997755 5688889999999999999998877763321 11 11111
Q ss_pred ---ccccccccccccCC--CCch-----------------HH-------HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 898 ---GLLGEMYNENEVGS--SSSL-----------------QD-------EIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 898 ---~~~~~~~~~~~~~~--~~~~-----------------~~-------~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..++..-+..|... .++. .. .....+++..+++..||.+|-|++|+++.
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 11111111111100 0000 00 01235788899999999999999999864
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-31 Score=285.74 Aligned_cols=247 Identities=19% Similarity=0.256 Sum_probs=185.0
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||.|++|.||+|+.. +|+.||||+++.... ..+.+.+|++++++++||||+++++++.+.+..++||||++ |
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 82 (284)
T cd07836 4 QLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD-K 82 (284)
T ss_pred EeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC-c
Confidence 6788999999999999964 789999999875432 34567789999999999999999999999999999999998 5
Q ss_pred ChhHHhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--C
Q 002186 772 NLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--F 844 (955)
Q Consensus 772 sL~~~l~~-----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~ 844 (955)
+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||++++++.+|++|||++......... .
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (284)
T cd07836 83 DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN 159 (284)
T ss_pred cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence 89888764 357888999999999999999988 9999999999999999999999999998654322111 1
Q ss_pred cccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc---------cc------cccccccccc
Q 002186 845 PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DG------LLGEMYNENE 908 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~---------~~------~~~~~~~~~~ 908 (955)
.....+|.+||...+ ..++.++|||||||++|||+||+.|+........... .. .........+
T Consensus 160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07836 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP 239 (284)
T ss_pred ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence 113345778887654 4568889999999999999999988864332110000 00 0000000000
Q ss_pred cCCCCc----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 909 VGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 909 ~~~~~~----~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...... .+.....+.+++.+|++.||++||+++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000 0122356778999999999999999999975
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-31 Score=286.33 Aligned_cols=247 Identities=19% Similarity=0.253 Sum_probs=180.9
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|++|.||+|+.. +|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~- 84 (294)
T PLN00009 6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD- 84 (294)
T ss_pred EEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-
Confidence 6788999999999999964 78999999986532 224567789999999999999999999999999999999996
Q ss_pred CChhHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-CCCceECcccccccccccCCC--
Q 002186 771 GNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 771 gsL~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
++|.+++... .++.....++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++.........
T Consensus 85 ~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (294)
T PLN00009 85 LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFT 161 (294)
T ss_pred ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccc
Confidence 5888877542 35666678999999999999998 9999999999999985 567899999998654322111
Q ss_pred CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc---------ccc------cccccccc
Q 002186 844 FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGL------LGEMYNEN 907 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~---------~~~------~~~~~~~~ 907 (955)
...+...+.+||+..+ ..++.++||||+||++|||+||+.||........... ... ........
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (294)
T PLN00009 162 HEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAF 241 (294)
T ss_pred cCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhc
Confidence 1123445778887755 3578899999999999999999998864321100000 000 00000000
Q ss_pred ccCCCCc----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 908 EVGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 908 ~~~~~~~----~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+...... .+.....+.+++.+|++.||++||+++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 242 PKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred ccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000000 0112345778999999999999999999986
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=308.01 Aligned_cols=254 Identities=15% Similarity=0.138 Sum_probs=177.0
Q ss_pred HhhhcccchhhhccCCCCCceEEEeCC--CCcEEEEE------------------EeecccchHHHHHHHHHHHhccCCC
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVLP--TGITVSVK------------------KIEWGATRIKIVSEFITRIGTVRHK 746 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~~--~g~~vAvK------------------~~~~~~~~~~~~~~e~~~l~~l~H~ 746 (955)
..+.|. ..+.||+|+||+||+|... ++..+++| +++........+.+|++++++++||
T Consensus 146 ~~~~Y~--ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 146 FLAHFR--VIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhccE--EEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 345566 8889999999999988642 22222222 2221222345678999999999999
Q ss_pred CceeEeEEEEcCCeeEEEEeecCCCChhHHhhc-CC------CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCee
Q 002186 747 NLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRT-KR------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 819 (955)
Q Consensus 747 niv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~-~~------~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiL 819 (955)
|||++++++.+.+..|+|+||+. +++.+++.. .. ...+...|+.|++.||+|||+. +||||||||+|||
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NIL 299 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIF 299 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence 99999999999999999999995 577777653 22 2334567999999999999998 9999999999999
Q ss_pred eCCCCCceECcccccccccccCCC---CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCC-CCCcc
Q 002186 820 FDENMEPHLAEFGFKYLTQLADGS---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSS-LQNKP 895 (955)
Q Consensus 820 l~~~~~~ki~DfGl~~~~~~~~~~---~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~-~~~~~ 895 (955)
++.++.+||+|||+++........ ...++..|.+||+..+..++.++|||||||++|||++|+.++..... .....
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~ 379 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ 379 (501)
T ss_pred ECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence 999999999999999765432211 12245567889998888899999999999999999999865543211 00000
Q ss_pred ccccc-------ccc----------ccccccC-CCCchHH------HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 896 IDGLL-------GEM----------YNENEVG-SSSSLQD------EIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 896 ~~~~~-------~~~----------~~~~~~~-~~~~~~~------~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+ .+. ++..... ....... ....+.+++.+|++.||++|||+.|++++
T Consensus 380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00000 000 0000000 0000011 11245667889999999999999999864
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=287.98 Aligned_cols=243 Identities=16% Similarity=0.181 Sum_probs=180.3
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc--hHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT--RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|+|++|.||+|+.. +|+.||||+++.... ....+.+|++.+.+.. ||||++++|+|.+....|+||||++
T Consensus 19 ~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~- 97 (296)
T cd06618 19 NLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS- 97 (296)
T ss_pred eeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-
Confidence 7789999999999999976 499999999975322 3345566777666665 9999999999999999999999985
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-cc
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF-PA 846 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~-~~ 846 (955)
+++.+.+.. .+++..+..++.|+++|++|||+.+ +|+||||||+||+++.++.+||+|||++.......... ..
T Consensus 98 ~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~ 175 (296)
T cd06618 98 TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSA 175 (296)
T ss_pred cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCC
Confidence 467666543 4688888999999999999999631 89999999999999999999999999986543222111 11
Q ss_pred cccccCchhhhhccC----CcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 847 KIAWTESGEFYNAMK----EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~----~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
+...+.+||...... ++.++|||||||++|||++|+.|+....... +............ .+.......++
T Consensus 176 ~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~l 249 (296)
T cd06618 176 GCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF-----EVLTKILQEEPPS-LPPNEGFSPDF 249 (296)
T ss_pred CCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH-----HHHHHHhcCCCCC-CCCCCCCCHHH
Confidence 233467788776443 7789999999999999999999986422110 0111111111000 01111223567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+++.+||+.||.+||++++++++
T Consensus 250 ~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 250 CSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHHHHHHccCChhhCCCHHHHhcC
Confidence 889999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-31 Score=241.39 Aligned_cols=192 Identities=21% Similarity=0.289 Sum_probs=160.3
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..++||+|.||+||||+ ..+++.||+|+++.+.. -.....+||-+++.++|+|||+++++...++..-+|+|||.
T Consensus 6 kmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd- 84 (292)
T KOG0662|consen 6 KMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD- 84 (292)
T ss_pred HHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh-
Confidence 77899999999999999 46889999999976432 25567889999999999999999999999999999999996
Q ss_pred CChhHHhh---cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC--c
Q 002186 771 GNLSEKIR---TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF--P 845 (955)
Q Consensus 771 gsL~~~l~---~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~--~ 845 (955)
.+|..+.. ..++......++.|+.+|+.|+|++ .+.|||+||+|.||+.+++.|++|||+++.....-... .
T Consensus 85 qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipvrcysae 161 (292)
T KOG0662|consen 85 QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE 161 (292)
T ss_pred HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeece
Confidence 47766654 3567777788999999999999999 99999999999999999999999999998765433222 2
Q ss_pred ccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCC
Q 002186 846 AKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSS 890 (955)
Q Consensus 846 ~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~ 890 (955)
..+.||.+|.+..+ .-|++..|+||.|||+.|+.-.+.|...+.+
T Consensus 162 vvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~d 207 (292)
T KOG0662|consen 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 207 (292)
T ss_pred eeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCc
Confidence 35678888876655 4578889999999999999987777664443
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=279.00 Aligned_cols=240 Identities=17% Similarity=0.195 Sum_probs=191.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|+|++|.||+++. .+|+.+|+|.+.... .....+.+|++.+++++||||+++++++.+.+..++||||+++
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd08530 4 VLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPF 83 (256)
T ss_pred EeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCC
Confidence 667899999999999974 588999999987532 2345677899999999999999999999999999999999999
Q ss_pred CChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 771 GNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 771 gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
++|.+++.. ..++.....++.|+++|++|||+. +++||||||+||+++.++.+|++|||++..........
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 160 (256)
T cd08530 84 GDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT 160 (256)
T ss_pred CCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence 999999865 357888899999999999999998 99999999999999999999999999987654432222
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..+...+.+||......++.++||||+|+++|||++|+.|+....... .. ....... . .+.......++.+
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~---~~~~~~~-~--~~~~~~~~~~~~~ 231 (256)
T cd08530 161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD---LR---YKVQRGK-Y--PPIPPIYSQDLQN 231 (256)
T ss_pred ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HH---HHHhcCC-C--CCCchhhCHHHHH
Confidence 224445778898888888889999999999999999999986432110 00 0010111 1 1111234466889
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 002186 925 VALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
++.+|++.+|++|||+.|+++.
T Consensus 232 li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 232 FIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HHHHHcCCCcccCCCHHHHhcC
Confidence 9999999999999999999763
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-31 Score=285.74 Aligned_cols=246 Identities=21% Similarity=0.247 Sum_probs=184.9
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ey~ 768 (955)
..+.+|+|++|.||+|+.. +|+.||||++.... ...+.+.+|++++++++|||++++++++... +..++||||+
T Consensus 3 ~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 82 (287)
T cd07840 3 KIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYM 82 (287)
T ss_pred eeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccc
Confidence 5678999999999999865 68999999997642 2245677899999999999999999999987 8999999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 842 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--- 842 (955)
+ ++|.+++.. ..++.+...++.|+++|++|||+. +++|+||||+||++++++.+|++|||++........
T Consensus 83 ~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (287)
T cd07840 83 D-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY 158 (287)
T ss_pred c-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccc
Confidence 7 589988865 467888899999999999999998 999999999999999999999999999875543321
Q ss_pred CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Cccccccc--cccc
Q 002186 843 SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLL--GEMY 904 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~--~~~~ 904 (955)
........+.+||...+ ..++.++|||||||++|||+||+.|+....... .|...... ....
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07840 159 TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENL 238 (287)
T ss_pred cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhc
Confidence 11122344677886543 457889999999999999999998886432110 00000000 0000
Q ss_pred cccccCCCC----chHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 905 NENEVGSSS----SLQD-EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 905 ~~~~~~~~~----~~~~-~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..... ... .... ....+.+++.+||..+|.+||+++++++
T Consensus 239 ~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 239 KPKKP-YKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccccc-chhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000 000 0011 1456889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-31 Score=293.48 Aligned_cols=252 Identities=18% Similarity=0.245 Sum_probs=186.9
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc----CCe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~ 760 (955)
+.|+ ..+.||+|++|.||+|.. .+|+.||+|++.... ...+.+.+|+.++++++||||+++++++.. ...
T Consensus 5 ~~y~--~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 5 SRYK--PIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hcee--eeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 3455 678899999999999985 579999999987532 234566789999999999999999998763 346
Q ss_pred eEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
.++||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 899999996 699999864 457888899999999999999998 99999999999999999999999999986543
Q ss_pred ccCCC------CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc-----------------
Q 002186 839 LADGS------FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK----------------- 894 (955)
Q Consensus 839 ~~~~~------~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~----------------- 894 (955)
..... ...+..+|.+||.... ..++.++|||||||++|||++|+.||.........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~ 238 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNR 238 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhh
Confidence 22211 1123445778887654 45788999999999999999999998643221100
Q ss_pred cccccccccccccccCCCCc----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 895 PIDGLLGEMYNENEVGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.......+..+..+...... .+.....+.+++.+|++.||++|||++|++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 239 IGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000000100000000000 11234668899999999999999999999863
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=277.51 Aligned_cols=239 Identities=20% Similarity=0.275 Sum_probs=190.2
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|+|++|.||+|+.. +|+.||||.+..... ..+.+.+|++++++++|||++++++++.+.+..++||||+++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (254)
T cd06627 4 LGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAEN 83 (254)
T ss_pred eeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCC
Confidence 6678999999999999854 788999999976442 456788999999999999999999999999999999999999
Q ss_pred CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Ccc
Q 002186 771 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 846 (955)
Q Consensus 771 gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~ 846 (955)
++|.+++.. ..++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++......... ...
T Consensus 84 ~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 160 (254)
T cd06627 84 GSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVV 160 (254)
T ss_pred CcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccc
Confidence 999999875 568889999999999999999998 9999999999999999999999999998765433221 112
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
+...|.+||......++.++||||+|+++|||++|+.|+........ ........ . ..........+.+++
T Consensus 161 ~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~------~~~~~~~~-~--~~~~~~~~~~~~~~i 231 (254)
T cd06627 161 GTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA------LFRIVQDD-H--PPLPEGISPELKDFL 231 (254)
T ss_pred cchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH------HHHHhccC-C--CCCCCCCCHHHHHHH
Confidence 34457788887777788899999999999999999998864331110 00000000 0 001112234577889
Q ss_pred HHccCCCCCCCCCHHHHHH
Q 002186 927 LLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~ 945 (955)
.+|+..+|++|||+.|++.
T Consensus 232 ~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 232 MQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHhCChhhCcCHHHHhc
Confidence 9999999999999999975
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=285.73 Aligned_cols=248 Identities=20% Similarity=0.236 Sum_probs=188.4
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|++|.||+|... +|+.+|+|+++.... ....+.+|++.+++++||||+++++++.+++..++||||+++
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 82 (283)
T cd05118 3 KLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT 82 (283)
T ss_pred cceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC
Confidence 5577999999999999964 788999999865332 355678899999999999999999999999999999999975
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Cc
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FP 845 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~ 845 (955)
++.+++.. ..++.++..++.|+++|++|||+. +|+|+||||+||+++.++.+||+|||.+......... ..
T Consensus 83 -~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~ 158 (283)
T cd05118 83 -DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHY 158 (283)
T ss_pred -CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCc
Confidence 88888865 567888999999999999999998 9999999999999999999999999998655432211 12
Q ss_pred ccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc---------cccccccc-----------
Q 002186 846 AKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLLGEMY----------- 904 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~---------~~~~~~~~----------- 904 (955)
.+..++.+||...+. ..+.++||||+||++|||+||+.||........... ........
T Consensus 159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05118 159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP 238 (283)
T ss_pred cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhc
Confidence 244457788877665 688899999999999999999988864332110000 00000000
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...........+....++.+++..||+.||.+||+++|++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 239 KKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred cccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000000001112345678899999999999999999999863
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=263.51 Aligned_cols=249 Identities=15% Similarity=0.191 Sum_probs=190.9
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhc-cCCCCceeEeEEEEc----CC
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGT-VRHKNLIRLLGFCYN----RH 759 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~-l~H~niv~l~g~~~~----~~ 759 (955)
.+++.|.... +++|-|-.|.|..+.. .+|+.+|+|++... ...++|++.--+ -.|||||.++++|+. ..
T Consensus 58 ~itedY~is~-qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 58 SITEDYSISW-QVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred cchhhheehh-hhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 3445565434 7899999999999884 58999999998643 345567776433 359999999999864 35
Q ss_pred eeEEEEeecCCCChhHHhhcCCC--H--HHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---CCCceECccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRTKRD--W--AAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFG 832 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~~~~--~--~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DfG 832 (955)
...+|||.|+||.|...+..+.+ + .+.-.|+.||+.|+.|||+. .|.||||||+|+|... +...|++|||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccc
Confidence 67899999999999999987554 3 44568999999999999999 9999999999999964 4568999999
Q ss_pred ccccccccC-CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCC--CCCcccccccccccccccc
Q 002186 833 FKYLTQLAD-GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSS--LQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 833 l~~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~ 909 (955)
+|+...... -..+.-++||.+||+....+++..+|+||+||++|-|+.|-+||+.-.. +..... ..+.....-
T Consensus 210 FAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk----~rI~~gqy~ 285 (400)
T KOG0604|consen 210 FAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK----RRIRTGQYE 285 (400)
T ss_pred cccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHH----hHhhccCcc
Confidence 998765322 2334567889999999999999999999999999999999999983221 111111 111111111
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...+++....+...+++...+..+|.+|-|+.|++..
T Consensus 286 FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 286 FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 1245566677788899999999999999999999863
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=282.27 Aligned_cols=248 Identities=19% Similarity=0.238 Sum_probs=184.2
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc--hHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT--RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|++|+||+|+.. +|+.||||++..... ......+|++.+++++ ||||+++++++.+++..++||||+ +
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~ 81 (283)
T cd07830 3 VIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-E 81 (283)
T ss_pred eheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-C
Confidence 5678999999999999975 688999999865432 2334456889999999 999999999999999999999999 8
Q ss_pred CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-c
Q 002186 771 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF-P 845 (955)
Q Consensus 771 gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~-~ 845 (955)
|+|.+.+.. ..++.+...++.|++.||.|||+. +++|+||||.||+++.++.+|++|||++.......... .
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (283)
T cd07830 82 GNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY 158 (283)
T ss_pred CCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence 899998865 348899999999999999999998 99999999999999999999999999987554322111 1
Q ss_pred ccccccCchhhhh-ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Ccccccccccccccccc
Q 002186 846 AKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLLGEMYNENEV 909 (955)
Q Consensus 846 ~~~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~ 909 (955)
.+...+.+||... ...++.++|||||||++|||+||+.|+....... .|..........+....
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07830 159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP 238 (283)
T ss_pred CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence 2334467777653 4457889999999999999999998875332100 00000000000000000
Q ss_pred -CCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 910 -GSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 910 -~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...... +.....+.+++.+||+.||++|||++|++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000 1113568899999999999999999999763
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=306.77 Aligned_cols=246 Identities=20% Similarity=0.275 Sum_probs=181.6
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcC----
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR---- 758 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~---- 758 (955)
.....|+ +.+.+|+||||.|||++.+ ||+.+|||+|.... .......+|++.+++++|||||+++..+.+.
T Consensus 476 RY~~DFE--EL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 476 RYLNDFE--ELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred hHhhhhH--HHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcc
Confidence 3445577 9999999999999999965 99999999997653 3345678899999999999999988543210
Q ss_pred --------------------------------------------------------------------------------
Q 002186 759 -------------------------------------------------------------------------------- 758 (955)
Q Consensus 759 -------------------------------------------------------------------------------- 758 (955)
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence
Q ss_pred -----------------------------------CeeEEEEeecCCCChhHHhhcCC---CHHHHHHHHHHHHHHHHHH
Q 002186 759 -----------------------------------HQAYLLYDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFL 800 (955)
Q Consensus 759 -----------------------------------~~~~lv~ey~~~gsL~~~l~~~~---~~~~~~~i~~~ia~gl~~l 800 (955)
-..||-||||+.-.+++.+++.. .-...++++.+|++||+|+
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHH
Confidence 01367899999988888887633 2445689999999999999
Q ss_pred hcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc----c----------c------CCCCcccccccCchhhhhcc
Q 002186 801 HHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ----L----------A------DGSFPAKIAWTESGEFYNAM 860 (955)
Q Consensus 801 H~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~----~----------~------~~~~~~~~~~~~~~e~~~~~ 860 (955)
|+. +||||||||.||++|++..+||+|||+|.... . . ......+++.|++||.....
T Consensus 714 H~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 HDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred HhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 999 99999999999999999999999999987511 0 0 01112367778999988654
Q ss_pred ---CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCC-CchHHHHHHHHHHHHHccCCCCCC
Q 002186 861 ---KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS-SSLQDEIKLVLDVALLCTRSTPSD 936 (955)
Q Consensus 861 ---~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~Cl~~dp~~ 936 (955)
+|+.|+|+||+|||++||+. ||...... ...+...-+.. ++.+ ....+....-..++.++++.||++
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMER-----a~iL~~LR~g~-iP~~~~f~~~~~~~e~slI~~Ll~hdP~k 861 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTSMER-----ASILTNLRKGS-IPEPADFFDPEHPEEASLIRWLLSHDPSK 861 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCchHHH-----HHHHHhcccCC-CCCCcccccccchHHHHHHHHHhcCCCcc
Confidence 59999999999999999987 55533211 11112222221 1111 112233344457788899999999
Q ss_pred CCCHHHHHH
Q 002186 937 RPSMEEALK 945 (955)
Q Consensus 937 RPt~~ev~~ 945 (955)
|||+.|+++
T Consensus 862 RPtA~eLL~ 870 (1351)
T KOG1035|consen 862 RPTATELLN 870 (1351)
T ss_pred CCCHHHHhh
Confidence 999999985
|
|
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=282.84 Aligned_cols=247 Identities=21% Similarity=0.217 Sum_probs=181.8
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc---hHHHHHHHHHHHhcc---CCCCceeEeEEEEcCCe-----eE
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT---RIKIVSEFITRIGTV---RHKNLIRLLGFCYNRHQ-----AY 762 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~~~-----~~ 762 (955)
..+.+|+|+||.||+|+.. +|+.||||+++.... ....+.+|++++.++ +||||+++++++...+. .+
T Consensus 3 ~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 82 (287)
T cd07838 3 ELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLT 82 (287)
T ss_pred EEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeE
Confidence 5678999999999999975 589999999974321 133455667666554 69999999999988776 99
Q ss_pred EEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
+||||++ ++|.+++.. ..++.+...++.|+++||+|||+. +++|+|+||+||+++.++.+|++|||++....
T Consensus 83 l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 83 LVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred EEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 9999997 589888864 368899999999999999999998 99999999999999999999999999987653
Q ss_pred ccCCCC-cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------cccccc-cc
Q 002186 839 LADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGL-LG 901 (955)
Q Consensus 839 ~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~~~~~~-~~ 901 (955)
...... ..+...+.+||+.....++.++|||||||++|||+||+.|+........ +..... ..
T Consensus 159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07838 159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR 238 (287)
T ss_pred CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence 322111 1133446788888888889999999999999999999887763221100 000000 00
Q ss_pred cccccccc-CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 902 EMYNENEV-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 902 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..+..... ......++....+.+++.+||+.||++||+++|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000000 000111233456789999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=284.18 Aligned_cols=245 Identities=13% Similarity=0.124 Sum_probs=174.0
Q ss_pred hhhhccCCCCCceEEEeCCC----CcEEEEEEeecccch--H----------HHHHHHHHHHhccCCCCceeEeEEEEcC
Q 002186 695 ECEEAARPQSAAGCKAVLPT----GITVSVKKIEWGATR--I----------KIVSEFITRIGTVRHKNLIRLLGFCYNR 758 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~----g~~vAvK~~~~~~~~--~----------~~~~~e~~~l~~l~H~niv~l~g~~~~~ 758 (955)
..+.||+|+||+||+|...+ +..+|+|........ . .....+...+..++|+||+++++++...
T Consensus 16 i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~ 95 (294)
T PHA02882 16 IDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFK 95 (294)
T ss_pred EeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEe
Confidence 78899999999999999643 456666654322111 0 1112233445677899999999987654
Q ss_pred C----eeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccc
Q 002186 759 H----QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 832 (955)
Q Consensus 759 ~----~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfG 832 (955)
. ..++++|++. .++.+.+.. ..++.....|+.|+++|++|||+. +|+||||||+|||++.++.+||+|||
T Consensus 96 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~~l~DFG 171 (294)
T PHA02882 96 RCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDYG 171 (294)
T ss_pred cCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcEEEEEcC
Confidence 3 4578888875 366666654 246777789999999999999998 99999999999999999999999999
Q ss_pred ccccccccCC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc---ccc
Q 002186 833 FKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID---GLL 900 (955)
Q Consensus 833 l~~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~---~~~ 900 (955)
+++....... ....++.+|++||+..+..++.++|||||||++|||+||+.||............ +..
T Consensus 172 la~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~ 251 (294)
T PHA02882 172 IASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFI 251 (294)
T ss_pred CceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHH
Confidence 9875432110 1112556688899988888999999999999999999999998744221111100 111
Q ss_pred cccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 901 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
..+.... .. .......+.+++..|+..+|++||+++++.+.+.
T Consensus 252 ~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 252 KRLHEGK-IK----IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHhhhhh-hc----cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 1111111 10 1122355778888999999999999999998763
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=286.07 Aligned_cols=251 Identities=20% Similarity=0.252 Sum_probs=184.1
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 759 (955)
+.|. ..+.+|+|+||.||+|+.. +|+.||||+++.... ....+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~~--~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 7 DKFD--IIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhh--eeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4566 7788999999999999964 689999999975322 2345678999999999999999999987654
Q ss_pred -----eeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcc
Q 002186 760 -----QAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 831 (955)
Q Consensus 760 -----~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~Df 831 (955)
..++||||+++ ++.+.+.. ..++.....++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~df 160 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLADF 160 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCcc
Confidence 78999999985 77777764 468899999999999999999998 9999999999999999999999999
Q ss_pred cccccccccCCC---CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc-cc--------
Q 002186 832 GFKYLTQLADGS---FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DG-------- 898 (955)
Q Consensus 832 Gl~~~~~~~~~~---~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~-~~-------- 898 (955)
|++......... .......|.+||.... ...+.++|||||||++|||++|+.|+........... ..
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (302)
T cd07864 161 GLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPA 240 (302)
T ss_pred cccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 998755332211 1112334667786654 4568889999999999999999988864321100000 00
Q ss_pred ccccc--------ccccccC---CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 899 LLGEM--------YNENEVG---SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 899 ~~~~~--------~~~~~~~---~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....+ .+..... ...........+.+++..||+.||++|||++|++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 241 VWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000 0000000 00000112356789999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=289.56 Aligned_cols=246 Identities=20% Similarity=0.227 Sum_probs=182.0
Q ss_pred hhhccCCCCCceEEEeC-CCCcEEEEEEeecccch---------------HHHHHHHHHHHhccCCCCceeEeEEEEcCC
Q 002186 696 CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR---------------IKIVSEFITRIGTVRHKNLIRLLGFCYNRH 759 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~---------------~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 759 (955)
.+.||.|+||+||+|.. .+|+.||||+++..... ...+.+|++++++++||||+++++++...+
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 46799999999999995 47999999998653221 124678999999999999999999999999
Q ss_pred eeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
..++||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||+++..
T Consensus 94 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~dfg~~~~~ 169 (335)
T PTZ00024 94 FINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADFGLARRY 169 (335)
T ss_pred cEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCccceeec
Confidence 9999999997 699999865 457778889999999999999998 9999999999999999999999999988654
Q ss_pred ccc--------------CCC--CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC-------
Q 002186 838 QLA--------------DGS--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN------- 893 (955)
Q Consensus 838 ~~~--------------~~~--~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~------- 893 (955)
... ... .......+.+||...+ ..++.++||||+||++|||+||+.|+........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~ 249 (335)
T PTZ00024 170 GYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFEL 249 (335)
T ss_pred ccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 310 000 1112344677887654 3468899999999999999999988864332110
Q ss_pred --------ccccccccccccccccCCCCc----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 894 --------KPIDGLLGEMYNENEVGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 894 --------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
|....... ...+........ .......+.+++.+|++.||++|||++|++.+
T Consensus 250 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 250 LGTPNEDNWPQAKKLP-LYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred hCCCchhhCcchhhcc-cccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 00000000 000000000000 01123567799999999999999999999863
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=292.05 Aligned_cols=257 Identities=19% Similarity=0.231 Sum_probs=189.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcC------
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------ 758 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------ 758 (955)
++|. ....||+|+||.||+|+. .+|+.||||+++... .....+.+|++++++++||||+++++++...
T Consensus 15 ~~y~--~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 15 ERYT--SLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred cceE--EEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 3455 778999999999999995 579999999986432 2234577899999999999999999998754
Q ss_pred CeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 759 HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
...++|+||+. +++.++.....++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||+++...
T Consensus 93 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~ 168 (342)
T cd07879 93 QDFYLVMPYMQ-TDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARHAD 168 (342)
T ss_pred ceEEEEecccc-cCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence 24699999996 488887766788999999999999999999998 99999999999999999999999999987543
Q ss_pred ccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-c----------------cc
Q 002186 839 LADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-G----------------LL 900 (955)
Q Consensus 839 ~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~----------------~~ 900 (955)
.... ...+..+|.+||.... ..++.++|||||||++|||++|+.||............ . ..
T Consensus 169 ~~~~-~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (342)
T cd07879 169 AEMT-GYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAA 247 (342)
T ss_pred CCCC-CceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccch
Confidence 2211 1123445778887654 46788999999999999999999998743211100000 0 00
Q ss_pred cccccccccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhccCC
Q 002186 901 GEMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLKP 952 (955)
Q Consensus 901 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~~~ 952 (955)
.......+....... +.....+.+++.+||+.||++||+++|++.+ ++++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 248 KSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 000000000000000 1123457799999999999999999999964 665544
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-32 Score=263.79 Aligned_cols=255 Identities=20% Similarity=0.312 Sum_probs=186.8
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc--cc-hHHHHHHHHHHHhccCCCCceeEeEEEEcC---
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--AT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNR--- 758 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~--~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--- 758 (955)
+....|+ ...+||+|.||+||||+- .+|+.||+|++--+ .. -.....+|+++|..++|+|++.+++.|...
T Consensus 14 ~~~~~ye--k~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp 91 (376)
T KOG0669|consen 14 DEVSKYE--KLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATP 91 (376)
T ss_pred ecchHHH--HHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCC
Confidence 3334455 788999999999999985 57888999876321 11 134456889999999999999999998642
Q ss_pred -----CeeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECc
Q 002186 759 -----HQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830 (955)
Q Consensus 759 -----~~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~D 830 (955)
...|+||++|+. ||...|.+ +.+..+..+++.++..||.|+|.. .|+|||+||+|+||+.++.+|++|
T Consensus 92 ~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 92 TNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred cccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeec
Confidence 358999999985 89888876 457888999999999999999999 999999999999999999999999
Q ss_pred ccccccccccCCCC------cccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC----------
Q 002186 831 FGFKYLTQLADGSF------PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------- 893 (955)
Q Consensus 831 fGl~~~~~~~~~~~------~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------- 893 (955)
||+++......... ...+.||.+||..-+ ..++++.|||..|||+.||.||.+.+.+....+.
T Consensus 168 FGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs 247 (376)
T KOG0669|consen 168 FGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGS 247 (376)
T ss_pred cccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhcc
Confidence 99997654332221 123668888887654 5788999999999999999999877764332221
Q ss_pred -----cccccccc--ccccccccCC--CCchHHHHH------HHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 894 -----KPIDGLLG--EMYNENEVGS--SSSLQDEIK------LVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 894 -----~~~~~~~~--~~~~~~~~~~--~~~~~~~~~------~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
|+..+.+. +.+...+++. ....++..+ +..+++...+..||++|++++|++.+
T Consensus 248 ~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 248 ITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred CCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 22111100 0000000110 001122222 56678888899999999999998854
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-30 Score=283.28 Aligned_cols=246 Identities=19% Similarity=0.245 Sum_probs=181.1
Q ss_pred hhhhccCCCCCceEEEeCC---CCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLP---TGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~---~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 765 (955)
....||+|++|.||+|... +|+.||||.+.... ...+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 83 (316)
T cd07842 4 IEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLF 83 (316)
T ss_pred EEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEE
Confidence 5677999999999999964 58999999997632 2245667889999999999999999999987 7899999
Q ss_pred eecCCCChhHHhhc-------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC----CCCceECccccc
Q 002186 766 DYLPNGNLSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE----NMEPHLAEFGFK 834 (955)
Q Consensus 766 ey~~~gsL~~~l~~-------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~----~~~~ki~DfGl~ 834 (955)
||+++ ++.+.+.. ..+......++.|++.|++|||+. +|+||||||+||+++. ++.+|++|||++
T Consensus 84 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 84 DYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred eCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 99974 77776642 345667788999999999999998 9999999999999999 899999999998
Q ss_pred ccccccCC-----CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC--ccc-----cccc-
Q 002186 835 YLTQLADG-----SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN--KPI-----DGLL- 900 (955)
Q Consensus 835 ~~~~~~~~-----~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~--~~~-----~~~~- 900 (955)
+....... .......+|.+||...+ ..++.++|||||||++|||+||+.|+........ .+. ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 75432211 11123445778887655 4578899999999999999999998873322110 000 0000
Q ss_pred -------------------cc---cccccccCCCCchH-------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 901 -------------------GE---MYNENEVGSSSSLQ-------DEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 901 -------------------~~---~~~~~~~~~~~~~~-------~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.. ........ ..... ....++.+++.+|++.||++|||++|+++
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYP-SNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCC-CccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00 00000000 01111 12346889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-30 Score=281.77 Aligned_cols=239 Identities=19% Similarity=0.239 Sum_probs=183.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.+|+|++|.||+|+. .+|..||||.+.... ...+.+.+|++++++++|||++++.+++...+..++||||+.
T Consensus 19 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 98 (308)
T cd06634 19 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 98 (308)
T ss_pred HHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC
Confidence 678899999999999995 478899999986421 223457789999999999999999999999999999999996
Q ss_pred CCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCcc
Q 002186 770 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA 846 (955)
Q Consensus 770 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~ 846 (955)
|++.+.+.. ..++.+...++.|++.|+.|||+. +++||||||+||+++.++.+|++|||++....... ...
T Consensus 99 -~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~--~~~ 172 (308)
T cd06634 99 -GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN--XFV 172 (308)
T ss_pred -CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCcc--ccc
Confidence 688887743 457788889999999999999998 99999999999999999999999999986543221 112
Q ss_pred cccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 847 KIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 847 ~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
+...|.+||... ....+.++|||||||++|||+||+.|+....... .. ....... .. ..........+.
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~----~~~~~~~-~~-~~~~~~~~~~~~ 244 (308)
T cd06634 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--AL----YHIAQNE-SP-ALQSGHWSEYFR 244 (308)
T ss_pred CCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH--HH----HHHhhcC-CC-CcCcccccHHHH
Confidence 334477888764 3457889999999999999999999986432110 00 0000000 00 000112335577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHh
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLL 947 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L 947 (955)
+++.+||+.+|++||+++++++.-
T Consensus 245 ~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 245 NFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred HHHHHHhhCCcccCCCHHHHhhCc
Confidence 889999999999999999998753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-30 Score=267.42 Aligned_cols=243 Identities=16% Similarity=0.122 Sum_probs=189.8
Q ss_pred hcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ....+|.|.-|+||.+.+. ++..+|+|++.+... .......|-++|++++||.+..|++.+++++..|+|
T Consensus 78 ~f~--llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 78 HFR--LLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHH--HHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 366 7889999999999999975 568999999986432 234567788999999999999999999999999999
Q ss_pred EeecCCCChhHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 765 YDYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||+||+|....+++ .+......++..|.-||+|||-. |||.|||||+|||+-++|++-++||.++......
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999988763 35556667889999999999999 9999999999999999999999999975321100
Q ss_pred ---------------------------------CCC-----------------C--------cccccccCchhhhhccCC
Q 002186 841 ---------------------------------DGS-----------------F--------PAKIAWTESGEFYNAMKE 862 (955)
Q Consensus 841 ---------------------------------~~~-----------------~--------~~~~~~~~~~e~~~~~~~ 862 (955)
... . -.++.+|.+||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 000 0 013445677888888899
Q ss_pred cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCC---
Q 002186 863 EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS--- 939 (955)
Q Consensus 863 ~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt--- 939 (955)
+.++|.|+|||++|||+.|+.||.+....+ .+..++... +. .+..+..+..+.+++.+.|.+||.+|-.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~------Tl~NIv~~~-l~-Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~r 384 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKE------TLRNIVGQP-LK-FPEEPEVSSAAKDLIRKLLVKDPSKRLGSKR 384 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchh------hHHHHhcCC-Cc-CCCCCcchhHHHHHHHHHhccChhhhhcccc
Confidence 999999999999999999999998654322 233333322 11 1112244567889999999999999987
Q ss_pred -HHHHHH
Q 002186 940 -MEEALK 945 (955)
Q Consensus 940 -~~ev~~ 945 (955)
+.||-+
T Consensus 385 GA~eIK~ 391 (459)
T KOG0610|consen 385 GAAEIKR 391 (459)
T ss_pred chHHhhc
Confidence 776644
|
|
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-30 Score=275.46 Aligned_cols=233 Identities=17% Similarity=0.162 Sum_probs=175.5
Q ss_pred ccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChhHHh
Q 002186 699 AARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 777 (955)
Q Consensus 699 ~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~~l 777 (955)
+|+|+||.||++.. .+|..+|+|.++.......+ .++..+ ..+||||+++++++..++..++||||+++|+|.+++
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e--~~~~~~-~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l 100 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIE--PMVHQL-MKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLL 100 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhh--HHHHHH-hhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHH
Confidence 59999999999985 57889999998643222111 111111 126999999999999999999999999999999999
Q ss_pred hc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-CceECcccccccccccCCCCcccccccCch
Q 002186 778 RT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADGSFPAKIAWTESG 854 (955)
Q Consensus 778 ~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~-~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~ 854 (955)
+. ..++.+...++.|+++|++|||+. +|+||||||+||+++.++ .++|+|||+++...... ...+...+.+|
T Consensus 101 ~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~y~aP 175 (267)
T PHA03390 101 KKEGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS--CYDGTLDYFSP 175 (267)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc--cCCCCCcccCh
Confidence 76 468999999999999999999998 999999999999999988 99999999986543221 11233447788
Q ss_pred hhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCC
Q 002186 855 EFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTP 934 (955)
Q Consensus 855 e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp 934 (955)
|+.....++.++||||+||++|||+||+.|+....... ..... ........ . +........+.+++.+|++.||
T Consensus 176 E~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~-~~~~~~~~-~---~~~~~~~~~~~~li~~~l~~~p 249 (267)
T PHA03390 176 EKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLES-LLKRQQKK-L---PFIKNVSKNANDFVQSMLKYNI 249 (267)
T ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHH-HHHhhccc-C---CcccccCHHHHHHHHHHhccCh
Confidence 98888888999999999999999999999987332110 00000 00111111 1 1112334567788899999999
Q ss_pred CCCCC-HHHHHH
Q 002186 935 SDRPS-MEEALK 945 (955)
Q Consensus 935 ~~RPt-~~ev~~ 945 (955)
.+||+ ++|+++
T Consensus 250 ~~R~~~~~~~l~ 261 (267)
T PHA03390 250 NYRLTNYNEIIK 261 (267)
T ss_pred hhCCchHHHHhc
Confidence 99996 698875
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=281.80 Aligned_cols=245 Identities=13% Similarity=0.081 Sum_probs=184.8
Q ss_pred hhhhccCCCCCceEEEeC----CCCcEEEEEEeeccc-----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEE
Q 002186 695 ECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~-----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 764 (955)
..+.||+|++|.||++.. .+++.||||.++... ...+.+.+|++++.++ +||||+++++.+..++..++|
T Consensus 4 ~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 83 (288)
T cd05583 4 LLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLI 83 (288)
T ss_pred EEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEE
Confidence 567899999999999873 467899999987432 2245677899999999 599999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. ..++.....++.|+++||+|||+. +++||||||+||+++.++.+|++|||+++.......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (288)
T cd05583 84 LDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE 160 (288)
T ss_pred EecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence 999999999999865 356778888999999999999988 999999999999999999999999999865432221
Q ss_pred C---CcccccccCchhhhhccC--CcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 843 S---FPAKIAWTESGEFYNAMK--EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 843 ~---~~~~~~~~~~~e~~~~~~--~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
. ...+...+.+||...+.. .+.++||||||+++|||+||..|+......... ........... . +....
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~-~---~~~~~ 234 (288)
T cd05583 161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ--SEISRRILKSK-P---PFPKT 234 (288)
T ss_pred cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchH--HHHHHHHHccC-C---CCCcc
Confidence 1 111233466778776544 678899999999999999999998632211100 01111111111 0 01111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
....+.+++.+||+.||++|||+++|.+.|+
T Consensus 235 ~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 235 MSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred cCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 2245678889999999999999988877665
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=280.84 Aligned_cols=243 Identities=14% Similarity=0.089 Sum_probs=182.6
Q ss_pred hhhhccCCCCCceEEEeC----CCCcEEEEEEeeccc-----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEE
Q 002186 695 ECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~-----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 764 (955)
..+.+|+|+||.||+|.. ++|+.||+|.++... ...+.+.+|++++.++ +|+||+++++++..++..++|
T Consensus 4 ~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (290)
T cd05613 4 LLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLI 83 (290)
T ss_pred eeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEE
Confidence 567899999999999885 478999999987532 1245678899999999 599999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. .+++.+...++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (290)
T cd05613 84 LDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV 160 (290)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence 999999999999865 356777778888999999999998 999999999999999999999999999875433211
Q ss_pred C---CcccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 843 S---FPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 843 ~---~~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
. ...+...|.+||.... ...+.++|||||||++|||+||+.|+....... ............. . +....
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~--~~~~~~~~~~~~~-~---~~~~~ 234 (290)
T cd05613 161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSE-P---PYPQE 234 (290)
T ss_pred cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc--cHHHHHHHhhccC-C---CCCcc
Confidence 1 1123344677787654 246778999999999999999999986321110 0011111111111 0 11112
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
....+.+++.+|++.||++|| ++++++++
T Consensus 235 ~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 235 MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 234567888999999999997 67777653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=305.27 Aligned_cols=243 Identities=23% Similarity=0.322 Sum_probs=187.0
Q ss_pred hhhccCCCCCceEEEeCC----C----CcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEE
Q 002186 696 CEEAARPQSAAGCKAVLP----T----GITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~----~----g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 764 (955)
.+.+|+|.||.|++|... . ...||||.++... .+.+.+..|+++|..+ +|||||.++|+|..++..++|
T Consensus 301 ~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v 380 (609)
T KOG0200|consen 301 GKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVI 380 (609)
T ss_pred cceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEE
Confidence 348999999999999732 2 4579999998643 3467789999999987 599999999999999999999
Q ss_pred EeecCCCChhHHhhcC------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCc
Q 002186 765 YDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~~------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ 826 (955)
+||++.|+|.++++.. +.....+.++.|||.|++||++. ++||||+-++|||+..+..+
T Consensus 381 ~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~~~~~ 457 (609)
T KOG0200|consen 381 VEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLITKNKVI 457 (609)
T ss_pred EEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEecCCCEE
Confidence 9999999999999763 34556789999999999999999 99999999999999999999
Q ss_pred eECcccccccccccCCCC------cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccc
Q 002186 827 HLAEFGFKYLTQLADGSF------PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLL 900 (955)
Q Consensus 827 ki~DfGl~~~~~~~~~~~------~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~ 900 (955)
||+|||+++......... ...+.| ++||......++.|+|||||||+|||+.|.+.+++.+..... ...
T Consensus 458 kIaDFGlar~~~~~~~y~~~~~~~~LP~kW-mApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~----~l~ 532 (609)
T KOG0200|consen 458 KIADFGLARDHYNKDYYRTKSSAGTLPVKW-MAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE----ELL 532 (609)
T ss_pred EEccccceeccCCCCceEecCCCCccceee-cCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH----HHH
Confidence 999999998533221110 123444 456877778999999999999999999996655544321111 111
Q ss_pred cccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 901 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
+.+.+... .+.+..+..++.++|..||+.+|++||++.|+++.++.
T Consensus 533 -~~l~~G~r--~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 533 -EFLKEGNR--MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred -HHHhcCCC--CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 11111101 11112234567799999999999999999999998876
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-32 Score=266.05 Aligned_cols=243 Identities=16% Similarity=0.157 Sum_probs=179.4
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc--chHHHHHHHHHH-HhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA--TRIKIVSEFITR-IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
....||+|.||+|+|.. .++|+.+|||+++... .+++.+..|.+. ++.-+.||||+++|.+..++..|+.||.|.
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd- 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD- 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-
Confidence 66789999999999988 5789999999997643 345667777776 445578999999999999999999999995
Q ss_pred CChhHHhhc-------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC-C
Q 002186 771 GNLSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-G 842 (955)
Q Consensus 771 gsL~~~l~~-------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~-~ 842 (955)
-|+..+-+. ..+..-.-.|....++||.||.... .|||||+||+|||+|..|.+|+||||++......- .
T Consensus 147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAk 224 (361)
T KOG1006|consen 147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAK 224 (361)
T ss_pred hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHHHHh
Confidence 477654432 3344444567778899999998764 89999999999999999999999999976543221 1
Q ss_pred CCcccccccCchhhhhc-c-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccc--cCCCCchHHH
Q 002186 843 SFPAKIAWTESGEFYNA-M-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE--VGSSSSLQDE 918 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~-~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 918 (955)
...++...|++||.... . .++.++||||+|+.|||++||+.|+....+. .+.+.+++...+ +.........
T Consensus 225 T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv-----feql~~Vv~gdpp~l~~~~~~~~~ 299 (361)
T KOG1006|consen 225 TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV-----FEQLCQVVIGDPPILLFDKECVHY 299 (361)
T ss_pred hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH-----HHHHHHHHcCCCCeecCccccccc
Confidence 22234555777776643 2 4889999999999999999999998754331 122233332221 1111222234
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...+.+++-.|+.+|-.+||...++.+
T Consensus 300 s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 300 SFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred CHHHHHHHHHHhhcccccCcchhhhhc
Confidence 566788888999999999999998765
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-30 Score=274.07 Aligned_cols=239 Identities=16% Similarity=0.193 Sum_probs=183.7
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecc------cchHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG------ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~------~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 765 (955)
..+.+|+|+||.||+|.. .+|+.||+|.+... ....+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 6 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~ 85 (264)
T cd06653 6 LGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFV 85 (264)
T ss_pred eeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEE
Confidence 678899999999999985 57999999987532 12245678899999999999999999998764 4688999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
||+++++|.+++.. ..++....+++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 86 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 162 (264)
T cd06653 86 EYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMS 162 (264)
T ss_pred EeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccccccccccc
Confidence 99999999999875 457888889999999999999998 999999999999999999999999999875432110
Q ss_pred ----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 843 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 843 ----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
....+...|.+||+......+.++|||||||++|||+||+.||....... ...+....... ...+...
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~--~~~p~~~ 234 (264)
T cd06653 163 GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA------AIFKIATQPTK--PMLPDGV 234 (264)
T ss_pred CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH------HHHHHHcCCCC--CCCCccc
Confidence 11123445778898887778899999999999999999999986432111 01111110000 0111223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...+.+++.+|+. +|.+||++.+++.
T Consensus 235 ~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 235 SDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 3557788889999 5799999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=281.62 Aligned_cols=246 Identities=22% Similarity=0.267 Sum_probs=186.5
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
....||+|++|.||+|+.. +|+.||+|.+.... ...+.+..|++.+++++||||+++++++.+.+..++||||++
T Consensus 3 ~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~- 81 (282)
T cd07829 3 KLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD- 81 (282)
T ss_pred eehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-
Confidence 4577999999999999965 69999999997642 224567789999999999999999999999999999999998
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC--c
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF--P 845 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~--~ 845 (955)
++|.+++.. ..++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||.++......... .
T Consensus 82 ~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (282)
T cd07829 82 MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158 (282)
T ss_pred cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence 599999975 468889999999999999999998 99999999999999999999999999987543322111 1
Q ss_pred ccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------ccccccc---cccccc
Q 002186 846 AKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLL---GEMYNE 906 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~---~~~~~~ 906 (955)
....++.+||..... .++.++|||||||++|||++|+.|+........ |...... ......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (282)
T cd07829 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK 238 (282)
T ss_pred ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence 123446788877655 788899999999999999999888754321100 0000000 000000
Q ss_pred cccCC--CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 907 NEVGS--SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 907 ~~~~~--~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
. ... ....+.....+.+++.+||+.||++||+++|++.
T Consensus 239 ~-~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 239 F-PPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred c-CccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0 000 0001122456889999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=288.45 Aligned_cols=253 Identities=21% Similarity=0.248 Sum_probs=190.8
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----eeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-----QAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~lv~ 765 (955)
..+.||+|++|.||+|... +|+.||||++... ....+.+.+|++.+++++||||+++++++...+ ..|+||
T Consensus 4 i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~ 83 (330)
T cd07834 4 LLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVT 83 (330)
T ss_pred eeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEe
Confidence 6678999999999999965 5899999998753 223567888999999999999999999998765 789999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC--
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 841 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~-- 841 (955)
||++ ++|.++++. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||++.......
T Consensus 84 e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~ 159 (330)
T cd07834 84 ELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE 159 (330)
T ss_pred cchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence 9998 589998876 467888899999999999999998 99999999999999999999999999987654332
Q ss_pred ---CCCcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------cc--ccccc
Q 002186 842 ---GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KP--IDGLL 900 (955)
Q Consensus 842 ---~~~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~~--~~~~~ 900 (955)
........+|.+||...+. .++.++||||+||++|||+||+.||........ +. .....
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (330)
T cd07834 160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA 239 (330)
T ss_pred cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccch
Confidence 1111244567888887766 788999999999999999999999864321100 00 00000
Q ss_pred cccccccccCCCC----chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhccC
Q 002186 901 GEMYNENEVGSSS----SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLK 951 (955)
Q Consensus 901 ~~~~~~~~~~~~~----~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~~ 951 (955)
.+........... ..+.....+.+++.+||+.||++|||++|++++ +++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred hhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 0000000000000 001124567899999999999999999999974 55443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=272.23 Aligned_cols=239 Identities=16% Similarity=0.192 Sum_probs=189.5
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|+|++|.||++... ++..||+|++.... ...+.+.+|++.+++++|||++++.+.+...+..++||||+++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~ 83 (258)
T cd08215 4 IIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADG 83 (258)
T ss_pred EEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCC
Confidence 5678999999999999964 78999999997543 3456688899999999999999999999999999999999999
Q ss_pred CChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC--C
Q 002186 771 GNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--G 842 (955)
Q Consensus 771 gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~--~ 842 (955)
++|.+++.. ..++.+...++.++++|++|||.. +++|+||||+||+++.++.+|++|||++....... .
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 160 (258)
T cd08215 84 GDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160 (258)
T ss_pred CcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence 999999864 357888999999999999999998 99999999999999999999999999986543322 1
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
....+...+.+||......++.++||||+|+++|||++|+.|+...... ..............+. .....+
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~ 231 (258)
T cd08215 161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL------ELALKILKGQYPPIPS---QYSSEL 231 (258)
T ss_pred cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH------HHHHHHhcCCCCCCCC---CCCHHH
Confidence 1112344577888887778889999999999999999999998643211 0111111111011111 223457
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.+++.+||..+|++|||+.|+++
T Consensus 232 ~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 232 RNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHHHHHHcCCChhhCcCHHHHhc
Confidence 78899999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=280.01 Aligned_cols=238 Identities=20% Similarity=0.249 Sum_probs=181.9
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.+|+|+||+||+|+. .+|+.||+|++..... ..+.+.+|++++++++|||++++++++.+.+..|+||||++
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 104 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL 104 (313)
T ss_pred cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC
Confidence 456799999999999985 4789999999864321 23457789999999999999999999999999999999996
Q ss_pred CCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCcc
Q 002186 770 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA 846 (955)
Q Consensus 770 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~ 846 (955)
|++.+++.. .+++.+...++.|++.|++|||+. +|+||||||+||+++.++.+|++|||++...... ....
T Consensus 105 -~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~--~~~~ 178 (313)
T cd06633 105 -GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA--NSFV 178 (313)
T ss_pred -CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCCC--CCcc
Confidence 688887754 468888999999999999999998 9999999999999999999999999987543221 1122
Q ss_pred cccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 847 KIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 847 ~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
+...|.+||+.. ...++.++|||||||++|||++|+.|+........ .. ...... .+. . .. ......+.
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~-~~-~~~~~~-~~~-~-~~---~~~~~~l~ 250 (313)
T cd06633 179 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LY-HIAQND-SPT-L-QS---NEWTDSFR 250 (313)
T ss_pred ccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HH-HHHhcC-CCC-C-Cc---cccCHHHH
Confidence 344577888764 34578889999999999999999999864332110 00 000000 000 0 01 11223467
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+++.+||+.+|.+||+++++++.
T Consensus 251 ~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 251 GFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 88899999999999999999863
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-30 Score=282.50 Aligned_cols=252 Identities=20% Similarity=0.269 Sum_probs=185.4
Q ss_pred hhhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEc-CCeeE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAY 762 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~ 762 (955)
.+.|. ....||+|+||.||+|. ..+|+.||||++... ....+.+.+|++++++++|||||++.+++.. .+..+
T Consensus 9 ~~~y~--~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 9 TNRYV--DLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccceE--EEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 34465 77899999999999998 458999999988542 2234567789999999999999999999876 55789
Q ss_pred EEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 763 LLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
+||||+ +++|.++++. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||.+.......
T Consensus 87 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~ 162 (328)
T cd07856 87 FVTELL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDPQM 162 (328)
T ss_pred EEeehh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccccCCCc
Confidence 999998 5689988875 557777788999999999999998 99999999999999999999999999986543222
Q ss_pred CCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc---------ccccccc--------cc
Q 002186 842 GSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---------PIDGLLG--------EM 903 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~---------~~~~~~~--------~~ 903 (955)
.. ..+...+.+||...+ ..++.++|||||||++|||+||+.||......... +..+... +.
T Consensus 163 ~~-~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd07856 163 TG-YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRF 241 (328)
T ss_pred CC-CcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHH
Confidence 11 122344677887654 56788999999999999999999888643210000 0000000 00
Q ss_pred ccc----cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 904 YNE----NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 904 ~~~----~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.. .+.+.....+.....+.+++.+|++.+|++|||++|++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 242 VQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 0000000001123567899999999999999999999864
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-30 Score=274.46 Aligned_cols=238 Identities=14% Similarity=0.135 Sum_probs=180.8
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecc------cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWG------ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~------~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||.||++... .+..+++|.++.. ......+..|+.++++++||||+++++++.+.+..++||||
T Consensus 4 i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (260)
T cd08222 4 LQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEY 83 (260)
T ss_pred eeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEe
Confidence 5678999999999999854 3455666665431 12233566788999999999999999999998899999999
Q ss_pred cCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 768 LPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 768 ~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
+++++|.+++.. ..++.+...++.|+++|+.|||+. +++|+|+||+||+++. ..+|++|||+++......
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 84 CEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred CCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 999999998853 467888999999999999999998 9999999999999975 569999999986543322
Q ss_pred CC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 GS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
.. ...+...+.+||......++.++||||||+++|||++|+.|+....... ......... . ........
T Consensus 160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~-~--~~~~~~~~ 230 (260)
T cd08222 160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS------VVLRIVEGP-T--PSLPETYS 230 (260)
T ss_pred ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHHcCC-C--CCCcchhc
Confidence 11 1123344678888877778889999999999999999999886332110 001111111 1 01112334
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..+.+++.+||..||++||++.|+++
T Consensus 231 ~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 231 RQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 56778999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-30 Score=286.13 Aligned_cols=252 Identities=20% Similarity=0.246 Sum_probs=186.1
Q ss_pred HhhhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCC---
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--- 759 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--- 759 (955)
+.++|. ..+.||+|+||.||+|. ..+|..||||++.... ...+.+.+|++++++++||||+++++++..+.
T Consensus 13 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 13 VPDRYR--DLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred cccceE--EEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 344566 78899999999999998 4589999999986432 12445778999999999999999999987643
Q ss_pred ---eeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 760 ---QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 760 ---~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
..++||||+ +++|.+++.. ..++.....++.|+++|++|||+. +|+||||||+||+++.++.+|++|||++.
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~~ 166 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 166 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccccc
Confidence 468999999 6799988865 668888999999999999999998 99999999999999999999999999987
Q ss_pred cccccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc---------cc---c---
Q 002186 836 LTQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DG---L--- 899 (955)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~---------~~---~--- 899 (955)
........ ......|.+||.... ..++.++||||+||++||+++|+.||........... .. .
T Consensus 167 ~~~~~~~~-~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd07880 167 QTDSEMTG-YVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQS 245 (343)
T ss_pred ccccCccc-cccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcc
Confidence 54332211 123445677887654 4578889999999999999999999874321100000 00 0
Q ss_pred --ccccccccccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 900 --LGEMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 900 --~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
........+....... +.....+.+++.+|++.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 246 EDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred hhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000000000 112345779999999999999999999984
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-30 Score=283.56 Aligned_cols=251 Identities=20% Similarity=0.236 Sum_probs=181.6
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 759 (955)
++|. ..+.||+|+||.||+|+. .+|+.||||++..... ....+.+|++.+++++||||+++++++.+..
T Consensus 8 ~~y~--~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 8 RDYE--ILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred ccEE--EEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 4565 778899999999999995 4789999999864322 2345678999999999999999999875433
Q ss_pred ---eeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccc
Q 002186 760 ---QAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833 (955)
Q Consensus 760 ---~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl 833 (955)
..++||||+++ ++.+.+.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+|++|||+
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCcc
Confidence 46999999974 77777654 468889999999999999999998 999999999999999999999999999
Q ss_pred cccccccCCCC-------------cccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC------
Q 002186 834 KYLTQLADGSF-------------PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN------ 893 (955)
Q Consensus 834 ~~~~~~~~~~~-------------~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~------ 893 (955)
++......... ..+...|.+||.... ..++.++|||||||++|||+||+.|+........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~ 241 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK 241 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 86543221100 012344677887654 4578899999999999999999988763322100
Q ss_pred ---------ccccccccccccccc-cCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 894 ---------KPIDGLLGEMYNENE-VGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 894 ---------~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+..........+... ....+.. ......+.+++.+|++.||++|||+.|++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 000000000000000 0000011 112256789999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-30 Score=284.63 Aligned_cols=253 Identities=21% Similarity=0.263 Sum_probs=185.7
Q ss_pred HhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcC----
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR---- 758 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~---- 758 (955)
+.++|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++||||+++++++...
T Consensus 15 ~~~~y~--~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~ 92 (345)
T cd07877 15 VPERYQ--NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE 92 (345)
T ss_pred ccCceE--EEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccc
Confidence 335566 778899999999999984 689999999997532 2245677899999999999999999988643
Q ss_pred --CeeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 759 --HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 759 --~~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
...++|+|++ +++|.+++.. ..++..+..++.|+++|++|||+. +|+||||||+||+++.++.+|++|||+++
T Consensus 93 ~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~dfg~~~ 168 (345)
T cd07877 93 EFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 168 (345)
T ss_pred ccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEecccccc
Confidence 3478888887 7899988865 578899999999999999999998 99999999999999999999999999987
Q ss_pred cccccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc---------cccccccc--
Q 002186 836 LTQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP---------IDGLLGEM-- 903 (955)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~---------~~~~~~~~-- 903 (955)
....... ...+..++.+||.... ..++.++|||||||++|||+||+.||.......... ........
T Consensus 169 ~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T cd07877 169 HTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 247 (345)
T ss_pred ccccccc-ccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhccc
Confidence 5432211 1223455778887654 467889999999999999999999886432111000 00000000
Q ss_pred ------ccccccCCCCchH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 904 ------YNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 904 ------~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+........ .....+.+++.+|++.||.+||++.|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 248 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0000000000000 123457799999999999999999999853
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-30 Score=286.35 Aligned_cols=250 Identities=19% Similarity=0.251 Sum_probs=182.2
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcC---------
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--------- 758 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--------- 758 (955)
+|. ..+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|++++++++||||+++++++...
T Consensus 6 ~y~--~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 6 RYM--DLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred ceE--EEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 455 778899999999999985 579999999986543 3356678899999999999999999876543
Q ss_pred -----CeeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-CCCceECcc
Q 002186 759 -----HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEF 831 (955)
Q Consensus 759 -----~~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-~~~~ki~Df 831 (955)
...++||||++ ++|.+++.. ..++.....++.|+++|+.|||+. +|+||||||+||+++. +..+|++||
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECCc
Confidence 35799999997 599888865 568888899999999999999998 9999999999999984 567899999
Q ss_pred cccccccccCC-----CCcccccccCchhhhh-ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc-------c--
Q 002186 832 GFKYLTQLADG-----SFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-------I-- 896 (955)
Q Consensus 832 Gl~~~~~~~~~-----~~~~~~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~-------~-- 896 (955)
|+++....... ....+..++.+||... ...++.++|||||||++|||++|+.||.......... .
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07854 160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239 (342)
T ss_pred ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 99865432111 1112344577888654 3567889999999999999999999996432110000 0
Q ss_pred ----ccc---cccccc-ccccCCCC---chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 897 ----DGL---LGEMYN-ENEVGSSS---SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 897 ----~~~---~~~~~~-~~~~~~~~---~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
... ...... .......+ ..+....++.+++.+|+..||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000 000000 00000000 00112356778999999999999999999985
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=267.83 Aligned_cols=219 Identities=16% Similarity=0.076 Sum_probs=168.8
Q ss_pred CCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChhHHhhc-
Q 002186 702 PQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRT- 779 (955)
Q Consensus 702 g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~- 779 (955)
|.+|.||++.. .+|+.||+|++.... ...+|...+....||||+++++++.+.+..++||||+++|+|.+++.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 79 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF 79 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh
Confidence 88999999995 578999999997542 233445555566799999999999999999999999999999999865
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCcccccccCchhhhh
Q 002186 780 -KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYN 858 (955)
Q Consensus 780 -~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~ 858 (955)
.+++.....++.|+++||+|+|+. +|+||||||+||+++.++.+|++|||.+......... ......|.+||...
T Consensus 80 ~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~y~aPE~~~ 155 (237)
T cd05576 80 LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDG-EAVENMYCAPEVGG 155 (237)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccccc-CCcCccccCCcccC
Confidence 468888999999999999999998 9999999999999999999999999987544322111 11233467788877
Q ss_pred ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCC
Q 002186 859 AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP 938 (955)
Q Consensus 859 ~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RP 938 (955)
...++.++||||+||++|||++|+.|+........ .... ...+. .....+.+++.+|++.||++||
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~--------~~~~---~~~~~---~~~~~~~~li~~~l~~dp~~R~ 221 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSGIN--------THTT---LNIPE---WVSEEARSLLQQLLQFNPTERL 221 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc--------cccc---cCCcc---cCCHHHHHHHHHHccCCHHHhc
Confidence 77788899999999999999999987653211000 0000 00011 1234567888899999999999
Q ss_pred CHHH
Q 002186 939 SMEE 942 (955)
Q Consensus 939 t~~e 942 (955)
++.+
T Consensus 222 ~~~~ 225 (237)
T cd05576 222 GAGV 225 (237)
T ss_pred CCCc
Confidence 9743
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-30 Score=277.26 Aligned_cols=238 Identities=19% Similarity=0.199 Sum_probs=187.2
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecc----cchHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWG----ATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~----~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.||+|++|.||+|+.. +|+.||+|.+... ....+.+.+|++++.+++ ||||+++++++.+.+..++||||+
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd05581 5 FGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYA 84 (280)
T ss_pred EeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCC
Confidence 6678999999999999964 7999999998652 223456788999999999 999999999999999999999999
Q ss_pred CCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC---
Q 002186 769 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 843 (955)
Q Consensus 769 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--- 843 (955)
++|+|.+++.+ ..++.....++.|++.|++|||+. +++|+||||+||+++.++.++++|||++.........
T Consensus 85 ~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~ 161 (280)
T cd05581 85 PNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESN 161 (280)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCccccccC
Confidence 99999999976 468899999999999999999998 9999999999999999999999999987654322110
Q ss_pred -------------------CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccc
Q 002186 844 -------------------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 844 -------------------~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
...+...+.+||......++.++||||+||+++|+++|+.|+....... ......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~ 235 (280)
T cd05581 162 KGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL------TFQKIL 235 (280)
T ss_pred CCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHH
Confidence 0012334667887777778889999999999999999999987433111 011111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCH----HHHHH
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSM----EEALK 945 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~----~ev~~ 945 (955)
... ...+. .....+.+++.+||+.||.+||++ +|+++
T Consensus 236 ~~~-~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 236 KLE-YSFPP---NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred hcC-CCCCC---ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 111 00111 123557789999999999999999 77654
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=269.11 Aligned_cols=231 Identities=15% Similarity=0.122 Sum_probs=182.5
Q ss_pred ccCCCCCceEEEeCC-CCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 699 AARPQSAAGCKAVLP-TGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 699 ~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
+|+|+||.||++... +|+.||+|.+..... ..+.+.+|++++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999964 689999999875432 345788899999999999999999999999999999999999999
Q ss_pred hHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC--CCCccccc
Q 002186 774 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSFPAKIA 849 (955)
Q Consensus 774 ~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~--~~~~~~~~ 849 (955)
.+++.. ..++.....++.|+++|+.|+|+. +++|+||||+||+++.++.++++|||.+....... .....+..
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 999976 467888899999999999999998 99999999999999999999999999986543321 11122334
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
.+.+||.......+.++||||||+++||+++|+.|+..... . .......... ...+. .....+.+++.+|
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-~-----~~~~~~~~~~-~~~~~---~~~~~l~~~i~~~ 227 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-K-----EIYEKILKDP-LRFPE---FLSPEARDLISGL 227 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-H-----HHHHHHhcCC-CCCCC---CCCHHHHHHHHHH
Confidence 46788888777788899999999999999999999864321 0 0111111111 11111 1134567899999
Q ss_pred cCCCCCCCCCHHH
Q 002186 930 TRSTPSDRPSMEE 942 (955)
Q Consensus 930 l~~dp~~RPt~~e 942 (955)
|..||++||++.+
T Consensus 228 l~~~p~~R~~~~~ 240 (250)
T cd05123 228 LQKDPTKRLGSGG 240 (250)
T ss_pred hcCCHhhCCCccc
Confidence 9999999999943
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-30 Score=285.89 Aligned_cols=251 Identities=22% Similarity=0.267 Sum_probs=186.4
Q ss_pred hhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCe---
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ--- 760 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~--- 760 (955)
.++|. ....||+|++|.||+|... +|+.||||++... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 14 ~~~y~--~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 14 PDRYQ--NLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cCceE--EEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 34565 7788999999999999964 6889999998642 2234556789999999999999999998876554
Q ss_pred ---eEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 761 ---AYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 761 ---~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
.++|+||+ +++|.+++.. ..++.....++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARH 167 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccccc
Confidence 89999999 5799998876 568899999999999999999998 999999999999999999999999999875
Q ss_pred ccccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-ccc--------c-----
Q 002186 837 TQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLL--------G----- 901 (955)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~--------~----- 901 (955)
...... .......|.+||.... ..++.++||||+||++|||+||+.||............ ... .
T Consensus 168 ~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07851 168 TDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSE 246 (343)
T ss_pred cccccc-CCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccch
Confidence 432211 1123445777887644 46788999999999999999999998643321100000 000 0
Q ss_pred ---ccccccccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 902 ---EMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 902 ---~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+....... ......+.+++.+|++.||++|||++||++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 247 SARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred hHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 00000000000000 112456889999999999999999999976
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=279.53 Aligned_cols=247 Identities=22% Similarity=0.243 Sum_probs=178.6
Q ss_pred hhhhccCCCCCceEEEeCC-C--CcEEEEEEeeccc---chHHHHHHHHHHHhccC-CCCceeEeEEEEcC----CeeEE
Q 002186 695 ECEEAARPQSAAGCKAVLP-T--GITVSVKKIEWGA---TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNR----HQAYL 763 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~--g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~----~~~~l 763 (955)
..+.||+|+||.||++... + |..||||+++... ...+.+.+|++++++++ |||||++++++... ...++
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 83 (332)
T cd07857 4 LIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYL 83 (332)
T ss_pred EEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEE
Confidence 5678999999999999954 4 7899999986421 22456678899999984 99999999976532 45789
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
++||++ ++|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 159 (332)
T cd07857 84 YEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFSENP 159 (332)
T ss_pred EEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence 999986 689998864 457888899999999999999998 99999999999999999999999999987543211
Q ss_pred C------CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc---------cccccccccc-
Q 002186 842 G------SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---------PIDGLLGEMY- 904 (955)
Q Consensus 842 ~------~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~---------~~~~~~~~~~- 904 (955)
. ....+...|.+||+..+ ..++.++||||+||++|||++|+.||......... +.........
T Consensus 160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (332)
T cd07857 160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS 239 (332)
T ss_pred ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh
Confidence 1 01123445677887654 46788999999999999999999888643211000 0000000000
Q ss_pred ----------cccc-cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 905 ----------NENE-VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 905 ----------~~~~-~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...+ .......+.....+.+++.+|++.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 240 PKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000 0000000112346779999999999999999999874
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=254.04 Aligned_cols=248 Identities=20% Similarity=0.196 Sum_probs=186.0
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc-chHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.+|+|+|+.|-.++ +.+|.++|||++.+.. .......+|++++...+ |+||+++++|++++...|||||-|.||
T Consensus 82 t~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GG 161 (463)
T KOG0607|consen 82 TSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGG 161 (463)
T ss_pred HHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCc
Confidence 45789999999999887 6899999999997643 33556678899988765 999999999999999999999999999
Q ss_pred ChhHHhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC---CCceECcccccccccccC-----
Q 002186 772 NLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYLTQLAD----- 841 (955)
Q Consensus 772 sL~~~l~~~~--~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~DfGl~~~~~~~~----- 841 (955)
+|..+|+++. ...+..+++.+||.||.|||.+ +|.|||+||+|||-.+. .-+||+||.+..-.....
T Consensus 162 plLshI~~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spa 238 (463)
T KOG0607|consen 162 PLLSHIQKRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPA 238 (463)
T ss_pred hHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCC
Confidence 9999998744 5556678999999999999999 99999999999997543 348999998764322111
Q ss_pred ----CCCcccccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCC-CCCCcccccc-------ccccc
Q 002186 842 ----GSFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGS-SLQNKPIDGL-------LGEMY 904 (955)
Q Consensus 842 ----~~~~~~~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~-~~~~~~~~~~-------~~~~~ 904 (955)
-..+.+.+.+++||+.. +..|+.++|.||+|||+|-|++|-.||.+.- ....|...+. +-+-+
T Consensus 239 stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesI 318 (463)
T KOG0607|consen 239 STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESI 318 (463)
T ss_pred CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHH
Confidence 11234556677887653 3468888999999999999999999998422 1233443311 11111
Q ss_pred cccc-cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 905 NENE-VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 905 ~~~~-~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
++.. -....++.....+..+++...+..||.+|-++.+++.
T Consensus 319 QEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 319 QEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred hccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 1111 1112234445556677777788899999999998876
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-30 Score=281.02 Aligned_cols=233 Identities=20% Similarity=0.155 Sum_probs=182.1
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
....+|.|+|++|-++. .++++..|||++... .....+|+.++.+. .||||+++.+.|.+..+.|+|||++.+|-
T Consensus 326 ~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~e 402 (612)
T KOG0603|consen 326 FREELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGE 402 (612)
T ss_pred cccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccH
Confidence 45569999999998888 568999999999754 23344566555544 69999999999999999999999999998
Q ss_pred hhHHhhcCCC-HHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee-CCCCCceECcccccccccccCCCCcccccc
Q 002186 773 LSEKIRTKRD-WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF-DENMEPHLAEFGFKYLTQLADGSFPAKIAW 850 (955)
Q Consensus 773 L~~~l~~~~~-~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl-~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~ 850 (955)
+.+.+..... -.++..|+.+++.|+.|||.+ +|||||+||+|||+ ++.+++|++|||.++....... .++-+..
T Consensus 403 ll~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~-tp~~t~~ 478 (612)
T KOG0603|consen 403 LLRRIRSKPEFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD-TPALTLQ 478 (612)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchhhc-ccchhhc
Confidence 8888876432 245667999999999999998 99999999999999 5889999999999986654411 2233445
Q ss_pred cCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHcc
Q 002186 851 TESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCT 930 (955)
Q Consensus 851 ~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl 930 (955)
|.+||+.....+++.+|+||+||+||||+||+.|+.....- . .+...+.. .+..........+++..||
T Consensus 479 y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-----~-ei~~~i~~-----~~~s~~vS~~AKdLl~~LL 547 (612)
T KOG0603|consen 479 YVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-----I-EIHTRIQM-----PKFSECVSDEAKDLLQQLL 547 (612)
T ss_pred ccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-----H-HHHHhhcC-----CccccccCHHHHHHHHHhc
Confidence 78899999889999999999999999999999998744321 0 11111111 1111233456778888999
Q ss_pred CCCCCCCCCHHHHHH
Q 002186 931 RSTPSDRPSMEEALK 945 (955)
Q Consensus 931 ~~dp~~RPt~~ev~~ 945 (955)
+.||.+||+|+|+..
T Consensus 548 ~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 548 QVDPALRLGADEIGA 562 (612)
T ss_pred cCChhhCcChhhhcc
Confidence 999999999999864
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-30 Score=271.48 Aligned_cols=247 Identities=17% Similarity=0.171 Sum_probs=193.2
Q ss_pred HhhhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeE
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 762 (955)
+..-|.....+.+|.|.||+||-|+ .++|+.||||.+++- ..+.+..+.|+.+|++++||-||.+.-.|++++.++
T Consensus 560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervF 639 (888)
T KOG4236|consen 560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVF 639 (888)
T ss_pred HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEE
Confidence 3333444567899999999999998 569999999999763 234677899999999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC---CCceECcccccc
Q 002186 763 LLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKY 835 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~DfGl~~ 835 (955)
.|||-+ +||..+.|-. +++...-+.++.||..||.|||.. +|+|.|+||+|||+.+. -.+|++|||+|+
T Consensus 640 VVMEKl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 640 VVMEKL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred EEehhh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecccccee
Confidence 999999 5787777643 333334467888999999999999 99999999999999644 469999999999
Q ss_pred cccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCc
Q 002186 836 LTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 914 (955)
Q Consensus 836 ~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (955)
.+....-. ...+++.|.+||+.....|+..-|+||.|||+|.-++|..||.+++++.+... .+.-++.+. .
T Consensus 716 iIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQ--NAaFMyPp~------P 787 (888)
T KOG4236|consen 716 IIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQ--NAAFMYPPN------P 787 (888)
T ss_pred ecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhh--ccccccCCC------c
Confidence 87543221 23366778899999999999999999999999999999999998776543211 122233332 2
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 915 LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 915 ~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+.+.....++++-..++..-++|-|.++.+.
T Consensus 788 W~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 788 WSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 3445556777777778888888888776543
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-30 Score=267.35 Aligned_cols=239 Identities=14% Similarity=0.098 Sum_probs=188.4
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
|. .-.++|+|+||.||-+.. .+|+.+|.|++.+.. ........|-.+|.++..|.||.+--.|++++..++|+
T Consensus 187 F~--~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 187 FR--VYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred ee--eeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 55 678899999999999884 589999999986532 23445678889999999999999999999999999999
Q ss_pred eecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 766 DYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 766 ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
..|.||||.-+|.+ ..+..+...++.+|+.||++||+. .||.||+||+|||+|++|+++|+|.|+|.......
T Consensus 265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~ 341 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK 341 (591)
T ss_pred EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCCC
Confidence 99999999998876 346777788999999999999999 99999999999999999999999999997665443
Q ss_pred CCC-cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 842 GSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 842 ~~~-~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
... ..++..|++||+.....|+...|.||+||++|||+.|+.||........+ +.+.+..-..+...+ +...+
T Consensus 342 ~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~---eEvdrr~~~~~~ey~---~kFS~ 415 (591)
T KOG0986|consen 342 PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR---EEVDRRTLEDPEEYS---DKFSE 415 (591)
T ss_pred ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH---HHHHHHHhcchhhcc---cccCH
Confidence 322 25778899999999999999999999999999999999999744322221 111111111111112 23344
Q ss_pred HHHHHHHHccCCCCCCCCCH
Q 002186 921 LVLDVALLCTRSTPSDRPSM 940 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~ 940 (955)
+..++....+..||++|-..
T Consensus 416 eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 416 EAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred HHHHHHHHHHccCHHHhccC
Confidence 55566666788999999654
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-29 Score=299.87 Aligned_cols=141 Identities=19% Similarity=0.229 Sum_probs=125.7
Q ss_pred hcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|... +|+.||||+++.... ....+.+|+.+++.++|||||++++++...+..|+|
T Consensus 5 ~y~--i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 5 EFV--IVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CEE--EEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 354 7788999999999999965 799999999975321 245678899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
|||+++|+|.++++. ..++.....|+.||+.||+|||.. +|+||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999975 457788899999999999999998 99999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-29 Score=261.31 Aligned_cols=250 Identities=17% Similarity=0.162 Sum_probs=185.7
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecc----cc----hHHHHHHHHHHHhccCCCCceeEeEEEE-cC
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWG----AT----RIKIVSEFITRIGTVRHKNLIRLLGFCY-NR 758 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~----~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~-~~ 758 (955)
++|- ...++|+|||+.||||. +...+.||||+-... .. -.+...+|.++-+.+.||.||++++|+. +.
T Consensus 463 ~RYL--lLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 463 DRYL--LLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred HHHH--HHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 4455 78899999999999999 456788999985321 11 1334678899999999999999999986 56
Q ss_pred CeeEEEEeecCCCChhHHhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC---CCCCceECcccc
Q 002186 759 HQAYLLYDYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD---ENMEPHLAEFGF 833 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~---~~~~~ki~DfGl 833 (955)
+.+|-|.|||+|.+|+-+|+.. .+..+...|+.||+.||.||... .|||||-|+||.|||+- ..|.+||.|||+
T Consensus 541 dsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred ccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 7889999999999999999764 35566678999999999999875 78999999999999985 447899999999
Q ss_pred cccccccCC---------CCcccccccCchhhhhc----cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccc
Q 002186 834 KYLTQLADG---------SFPAKIAWTESGEFYNA----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLL 900 (955)
Q Consensus 834 ~~~~~~~~~---------~~~~~~~~~~~~e~~~~----~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~ 900 (955)
++..+.... +.-+++.||.+||.+-- .+.+.|+||||.|||+|..+.|+.||......++.....
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN-- 697 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN-- 697 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh--
Confidence 987654321 22347889999986643 467889999999999999999999998544322211111
Q ss_pred cccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 901 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.++...++..++. +....+..+++.+|++..-++|....|+..
T Consensus 698 -TIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 698 -TILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred -chhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 1111111111111 112234557788899998888888777653
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-29 Score=278.73 Aligned_cols=246 Identities=18% Similarity=0.208 Sum_probs=195.8
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEc-----CCee
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYN-----RHQA 761 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~-----~~~~ 761 (955)
+.|+ ..+.||.|.+|.|||++ .++|+.+|||++.......++.+.|.++++.. .|||++.++|++.- +++.
T Consensus 19 d~~e--i~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqL 96 (953)
T KOG0587|consen 19 DIFE--IIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQL 96 (953)
T ss_pred CccE--EEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeE
Confidence 3466 78899999999999998 67899999999987777777888889998776 59999999999873 5799
Q ss_pred EEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
|||||||.+||.-|++++ .+.|.....|++.+++|+.+||.. .++|||||-.|||+..++.+|+.|||.+.-.
T Consensus 97 WLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 97 WLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred EEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 999999999999999876 557888888999999999999999 9999999999999999999999999998665
Q ss_pred cccCCC--CcccccccCchhhhhcc-----CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 838 QLADGS--FPAKIAWTESGEFYNAM-----KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 838 ~~~~~~--~~~~~~~~~~~e~~~~~-----~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
....+. +..+++++++||+.... .++..+|+||+|++..||.-|.+|+-+-.+. ...+. +.+.+.+
T Consensus 174 dsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm-----raLF~--IpRNPPP 246 (953)
T KOG0587|consen 174 DSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM-----RALFL--IPRNPPP 246 (953)
T ss_pred ecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh-----hhhcc--CCCCCCc
Confidence 543332 23367778888877543 3667789999999999999998887532211 11111 1111111
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+..-.+++.+++..|+..|-.+||++.+++++
T Consensus 247 kLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 247 KLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred cccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 122345567789999999999999999999998763
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-29 Score=250.61 Aligned_cols=242 Identities=14% Similarity=0.086 Sum_probs=183.2
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+.|. ..+++|+|.||+|..++ ..+|+.+|+|++++... +...-..|-++|+..+||.+..+.-.++..+..|.
T Consensus 168 ~dFd--fLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 168 EDFD--FLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred chhh--HHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 3466 78899999999999887 56899999999986432 22234567889999999999999988999999999
Q ss_pred EEeecCCCChhHHhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc-
Q 002186 764 LYDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA- 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~~~--~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~- 840 (955)
||||+.||.|.-+|.+.. +..+...+...|+.||.|||+. +||.||+|.+|.|+|.+|++||+|||+++.--..
T Consensus 246 VMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g 322 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYG 322 (516)
T ss_pred EEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhccccc
Confidence 999999999999887643 4444456777899999999998 9999999999999999999999999998742211
Q ss_pred -CCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 841 -DGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 841 -~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
....-++++.|.+||+.....|+..+|.|..|||||||+.|+-||+..+...- ......+++.-| .....
T Consensus 323 ~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL-FeLIl~ed~kFP------r~ls~-- 393 (516)
T KOG0690|consen 323 DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL-FELILMEDLKFP------RTLSP-- 393 (516)
T ss_pred ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHH-HHHHHhhhccCC------ccCCH--
Confidence 12223477889999999999999999999999999999999999985443110 000111222111 11222
Q ss_pred HHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPS-----MEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt-----~~ev~~ 945 (955)
+...+..-.+..||++|-. +.||.+
T Consensus 394 -eAktLLsGLL~kdP~kRLGgGpdDakEi~~ 423 (516)
T KOG0690|consen 394 -EAKTLLSGLLKKDPKKRLGGGPDDAKEIMR 423 (516)
T ss_pred -HHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence 2334444567789999953 566654
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-29 Score=285.82 Aligned_cols=193 Identities=17% Similarity=0.108 Sum_probs=162.9
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc----cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
|. ...+||+|+||.|..++. .+++.+|+|++.+- ......|.+|-.+|.--..+-||.++-.|+++++.|+||
T Consensus 77 fe--ilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVM 154 (1317)
T KOG0612|consen 77 FE--ILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVM 154 (1317)
T ss_pred hH--HHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEE
Confidence 66 899999999999999885 58999999999752 334667999999999888999999999999999999999
Q ss_pred eecCCCChhHHhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC--
Q 002186 766 DYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 841 (955)
Q Consensus 766 ey~~~gsL~~~l~~~~--~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~-- 841 (955)
|||+||||..++.+.. +..-...|+..|+.||+-+|+. |.|||||||.|||||..|++|++|||-+.......
T Consensus 155 dY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V 231 (1317)
T KOG0612|consen 155 DYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTV 231 (1317)
T ss_pred ecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhcCCCCcE
Confidence 9999999999997733 3333345777899999999999 99999999999999999999999999765443222
Q ss_pred -CCCcccccccCchhhhhc-----cCCcccccchhHHHHHHHHHhCCCCCCCC
Q 002186 842 -GSFPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAG 888 (955)
Q Consensus 842 -~~~~~~~~~~~~~e~~~~-----~~~~~~~DV~S~Gvvl~Elltg~~p~~~~ 888 (955)
.....+++-|-+||+..+ ..|+..+|.||+||++|||+.|..||+++
T Consensus 232 ~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad 284 (1317)
T KOG0612|consen 232 RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD 284 (1317)
T ss_pred EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH
Confidence 223447777888988754 45778899999999999999999999854
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=253.53 Aligned_cols=234 Identities=21% Similarity=0.220 Sum_probs=183.2
Q ss_pred CCCceEEEeCC-CCcEEEEEEeecccch--HHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChhHHhhc
Q 002186 703 QSAAGCKAVLP-TGITVSVKKIEWGATR--IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRT 779 (955)
Q Consensus 703 ~~g~vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~ 779 (955)
+||.||+|+.. +|+.||+|++...... .+.+.+|++.+++++|+||+++++++......++||||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999975 5899999999754322 57889999999999999999999999999999999999999999999876
Q ss_pred C--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-CCcccccccCchhh
Q 002186 780 K--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPAKIAWTESGEF 856 (955)
Q Consensus 780 ~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-~~~~~~~~~~~~e~ 856 (955)
. .++.....++.++++|++|||.. +|+|+||+|.||+++.++.++++|||.+........ ....+...+.+||.
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 RGRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 3 58888899999999999999998 999999999999999999999999999876543211 11223344678888
Q ss_pred hhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCC
Q 002186 857 YNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSD 936 (955)
Q Consensus 857 ~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~ 936 (955)
......+.++||||+|+++|||++|+.|+........ ......... ............++.+++.+|+..+|++
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 231 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLE-----LFKKIGKPK-PPFPPPEWKISPEAKDLIRKLLVKDPEK 231 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-----HHHHHhccC-CCCccccccCCHHHHHHHHHHccCCchh
Confidence 8777788899999999999999999988864221110 000000000 0000100013356788999999999999
Q ss_pred CCCHHHHHH
Q 002186 937 RPSMEEALK 945 (955)
Q Consensus 937 RPt~~ev~~ 945 (955)
||++.|+++
T Consensus 232 Rp~~~~~~~ 240 (244)
T smart00220 232 RLTAEEALQ 240 (244)
T ss_pred ccCHHHHhh
Confidence 999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-28 Score=229.76 Aligned_cols=191 Identities=19% Similarity=0.181 Sum_probs=152.3
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecc--cchHHHHHHHHHHH-hccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWG--ATRIKIVSEFITRI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~--~~~~~~~~~e~~~l-~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
....+|+|++|.|-|-+ .++|+..|||+++.+ .+.++...+|+.+. +....|.+|+++|.+...+..++.||.|.
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~- 128 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD- 128 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-
Confidence 56789999999998877 468999999999754 33455566677764 45679999999999999999999999996
Q ss_pred CChhHHhhc----C--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 771 GNLSEKIRT----K--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 771 gsL~~~l~~----~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
-||..+-++ . .+..-.-+||..|.+||.|||+.. .|||||+||+|||++.+|++|+||||++......-..
T Consensus 129 tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt 206 (282)
T KOG0984|consen 129 TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKT 206 (282)
T ss_pred hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhhhHHH
Confidence 488766543 2 244445689999999999999874 8999999999999999999999999998765433221
Q ss_pred CcccccccCchhhhhc----cCCcccccchhHHHHHHHHHhCCCCCCCC
Q 002186 844 FPAKIAWTESGEFYNA----MKEEMYMDVYGFGEIILEILTNGRLTNAG 888 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~----~~~~~~~DV~S~Gvvl~Elltg~~p~~~~ 888 (955)
..++...|++||.... ..|+-|+||||+|+.+.||.+++.|+..+
T Consensus 207 ~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 207 MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 1334555777876643 36889999999999999999999998743
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-28 Score=246.38 Aligned_cols=243 Identities=17% Similarity=0.172 Sum_probs=180.4
Q ss_pred hhhhccCCCCCceEEEeCC------CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcC-CeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNR-HQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-~~~~lv~ 765 (955)
...++-+|.||.||+|.+. +.+.|-||.++.... +...+..|-..+..+.|||+.++.|++.++ +..+.+|
T Consensus 288 l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y 367 (563)
T KOG1024|consen 288 LSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLY 367 (563)
T ss_pred chhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEE
Confidence 3455679999999999753 334566777765433 345677777888888999999999998764 5778899
Q ss_pred eecCCCChhHHhhc----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 766 DYLPNGNLSEKIRT----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 766 ey~~~gsL~~~l~~----------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
.|+.-|+|..+|.. ...-.+...++.|++.|++|||.+ +|||.||.++|++||+..++|++|-.+++
T Consensus 368 ~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDsaLSR 444 (563)
T KOG1024|consen 368 PATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDSALSR 444 (563)
T ss_pred eccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccchhcc
Confidence 99999999999972 123345567899999999999999 99999999999999999999999999987
Q ss_pred cccccCCC-----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccccccccc
Q 002186 836 LTQLADGS-----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 836 ~~~~~~~~-----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
..-..+-. ...... +++.|......++..+|||||||+||||+| |+.|+-+-++.+ +..-+.|...+
T Consensus 445 DLFP~DYhcLGDnEnRPvk-WMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE------m~~ylkdGyRl 517 (563)
T KOG1024|consen 445 DLFPGDYHCLGDNENRPVK-WMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE------MEHYLKDGYRL 517 (563)
T ss_pred ccCcccccccCCCCCCccc-ccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH------HHHHHhcccee
Confidence 65432211 111344 456677777889999999999999999998 555553322211 11111122111
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
. .+-+++.++..+|..||+.+|++||+++|++..|.+.
T Consensus 518 a---QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 518 A---QPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred c---CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 1 1224556788999999999999999999999988753
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-28 Score=281.83 Aligned_cols=249 Identities=16% Similarity=0.098 Sum_probs=156.0
Q ss_pred hcccchhhhccCCCCCceEEEeCC-C----CcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEE------EEcC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP-T----GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGF------CYNR 758 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~-~----g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~------~~~~ 758 (955)
.|. ..+.||+|+||.||+|+.. + |..||||++..... .+.+.. +.+.+..|.+++.+... +...
T Consensus 133 ~y~--l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~e~~~~--e~l~~~~~~~~~~~~~~~~~~~~~~~~ 207 (566)
T PLN03225 133 DFV--LGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-VEIWMN--ERVRRACPNSCADFVYGFLEPVSSKKE 207 (566)
T ss_pred CeE--EeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-hHHHHH--HHHHhhchhhHHHHHHhhhcccccccC
Confidence 455 7889999999999999964 5 78999999864321 111111 11222223333332221 2456
Q ss_pred CeeEEEEeecCCCChhHHhhcCC-C---------------------HHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCC
Q 002186 759 HQAYLLYDYLPNGNLSEKIRTKR-D---------------------WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKAS 816 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~~~-~---------------------~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~ 816 (955)
++.++||||+++|+|.+++.... . ......++.|+++||+|||+. +|+||||||+
T Consensus 208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~ 284 (566)
T PLN03225 208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQ 284 (566)
T ss_pred CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHH
Confidence 78999999999999999886421 0 112346899999999999998 9999999999
Q ss_pred CeeeCC-CCCceECcccccccccccCCC---CcccccccCchhhhhc----------------------cCCcccccchh
Q 002186 817 NIVFDE-NMEPHLAEFGFKYLTQLADGS---FPAKIAWTESGEFYNA----------------------MKEEMYMDVYG 870 (955)
Q Consensus 817 NiLl~~-~~~~ki~DfGl~~~~~~~~~~---~~~~~~~~~~~e~~~~----------------------~~~~~~~DV~S 870 (955)
|||++. ++.+||+|||+++........ ...+.+.|++||.+.. ..++.++||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 999985 578999999999754322111 1123345677774421 12345679999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCcccc--c----cccccccccccCC----CCchHHHHHHHHHHHHHccCCCCCCCCCH
Q 002186 871 FGEIILEILTNGRLTNAGSSLQNKPID--G----LLGEMYNENEVGS----SSSLQDEIKLVLDVALLCTRSTPSDRPSM 940 (955)
Q Consensus 871 ~Gvvl~Elltg~~p~~~~~~~~~~~~~--~----~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~ 940 (955)
||||+|||+++..+............. . .......+..... .+..........+++.+|++.||++|||+
T Consensus 365 lGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta 444 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISA 444 (566)
T ss_pred HHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCH
Confidence 999999999976554311000000000 0 0000000000000 00000112235589999999999999999
Q ss_pred HHHHHH
Q 002186 941 EEALKL 946 (955)
Q Consensus 941 ~ev~~~ 946 (955)
+|++++
T Consensus 445 ~e~L~H 450 (566)
T PLN03225 445 KAALAH 450 (566)
T ss_pred HHHhCC
Confidence 999874
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=254.32 Aligned_cols=252 Identities=15% Similarity=0.139 Sum_probs=190.1
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCC--C----CceeEeEEEEcCCe
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRH--K----NLIRLLGFCYNRHQ 760 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H--~----niv~l~g~~~~~~~ 760 (955)
..+|. ....+|+|.||+|.++.. .++..||||+++.-..-.+...-|+++++++.+ | -+|.+.+|+.-.++
T Consensus 88 ~~Ry~--i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 88 TNRYE--IVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred cccee--hhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 45566 888999999999999984 468999999998654455666778999999842 2 37888899988999
Q ss_pred eEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC--------------
Q 002186 761 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-------------- 822 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-------------- 822 (955)
.+||+|.+ |-|+.++++. ..+......++.|++++++|||+. +++|-|+||+|||+-+
T Consensus 166 iCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred eEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCccc
Confidence 99999988 4599999987 346677889999999999999999 9999999999999821
Q ss_pred ------CCCceECcccccccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc
Q 002186 823 ------NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 896 (955)
Q Consensus 823 ------~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~ 896 (955)
+..+||.|||-|....... +....+..|.+||++.+...+.++||||+||||.|+.||...|+..++.+...+
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~h-s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaM 320 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHH-STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAM 320 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCc-ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHH
Confidence 2357999999987644332 333466779999999999999999999999999999999998875443221111
Q ss_pred ccc-cc-------------cc-----cc------cc---ccCC--------CCchHHHHHHHHHHHHHccCCCCCCCCCH
Q 002186 897 DGL-LG-------------EM-----YN------EN---EVGS--------SSSLQDEIKLVLDVALLCTRSTPSDRPSM 940 (955)
Q Consensus 897 ~~~-~~-------------~~-----~~------~~---~~~~--------~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~ 940 (955)
.+. ++ +. ++ .. .... ......+..++++++.+++..||++|+|+
T Consensus 321 MerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl 400 (415)
T KOG0671|consen 321 MERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITL 400 (415)
T ss_pred HHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccH
Confidence 000 00 00 00 00 0000 00112345678999999999999999999
Q ss_pred HHHHHH
Q 002186 941 EEALKL 946 (955)
Q Consensus 941 ~ev~~~ 946 (955)
.|++.+
T Consensus 401 ~EAL~H 406 (415)
T KOG0671|consen 401 REALSH 406 (415)
T ss_pred HHHhcC
Confidence 999853
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=272.91 Aligned_cols=251 Identities=15% Similarity=0.140 Sum_probs=166.9
Q ss_pred hcccchhhhccCCCCCceEEEeC-----------------CCCcEEEEEEeecccch-H--------------HHHHHHH
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-----------------PTGITVSVKKIEWGATR-I--------------KIVSEFI 737 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-----------------~~g~~vAvK~~~~~~~~-~--------------~~~~~e~ 737 (955)
.|. ..++||+|+||+||+|.. .+++.||||+++..... . +....|+
T Consensus 146 ~F~--i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 146 DFQ--LRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred Cce--EeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 466 889999999999999963 34678999998643221 1 1223466
Q ss_pred HHHhccCCCCc-----eeEeEEEEc--------CCeeEEEEeecCCCChhHHhhcC------------------------
Q 002186 738 TRIGTVRHKNL-----IRLLGFCYN--------RHQAYLLYDYLPNGNLSEKIRTK------------------------ 780 (955)
Q Consensus 738 ~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lv~ey~~~gsL~~~l~~~------------------------ 780 (955)
..+.+++|+++ ++++|||.. .+..++||||+++|+|.++++..
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 67777777654 778888763 35689999999999999988631
Q ss_pred --CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---cccccccCchh
Q 002186 781 --RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAKIAWTESGE 855 (955)
Q Consensus 781 --~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~~~~~~~~~~e 855 (955)
.+|.....++.|+++||+|+|+. +|+||||||+||+++.++.+||+|||+++......... ....+.|.+||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 24666778999999999999998 99999999999999999999999999986432211111 11133466666
Q ss_pred hhhccC----------------------CcccccchhHHHHHHHHHhCCC-CCCCCCCCCCccc--cccc--cccccccc
Q 002186 856 FYNAMK----------------------EEMYMDVYGFGEIILEILTNGR-LTNAGSSLQNKPI--DGLL--GEMYNENE 908 (955)
Q Consensus 856 ~~~~~~----------------------~~~~~DV~S~Gvvl~Elltg~~-p~~~~~~~~~~~~--~~~~--~~~~~~~~ 908 (955)
.+.... ...+.||||+|||+|||++|.. |+........... .... ...+....
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~ 460 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK 460 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence 543211 1234799999999999999875 4432111000000 0000 00011110
Q ss_pred cCCCCchHHHHHHHHHHHHHccCCCC---CCCCCHHHHHHH
Q 002186 909 VGSSSSLQDEIKLVLDVALLCTRSTP---SDRPSMEEALKL 946 (955)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~Cl~~dp---~~RPt~~ev~~~ 946 (955)
.. .+..........+++.+++..+| .+|+|++|++++
T Consensus 461 ~~-~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 461 YD-FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred CC-cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 10 11122234556778888888765 789999999864
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-28 Score=231.78 Aligned_cols=245 Identities=13% Similarity=0.174 Sum_probs=180.8
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccC-CCCceeEeEEEEcC--CeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNR--HQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~--~~~~lv~ey~~~ 770 (955)
..+++|+|.+++||.|. ..+.+.++||.++ ....+.+.+|+.+|..++ |||||++++...++ ....||+||+.+
T Consensus 42 ivrk~GRGKYSEVFeg~~~~~~eK~ViKiLK--PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n 119 (338)
T KOG0668|consen 42 IVRKVGRGKYSEVFEGINITNNEKCVIKILK--PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNN 119 (338)
T ss_pred HHHHHcCccHhhHhcccccCCCceEEEeeec--hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhcc
Confidence 88999999999999998 4577889999997 445677889999999998 99999999998865 467899999999
Q ss_pred CChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-CCCceECcccccccccccCCCC-cccc
Q 002186 771 GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADGSF-PAKI 848 (955)
Q Consensus 771 gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-~~~~ki~DfGl~~~~~~~~~~~-~~~~ 848 (955)
-+....-. .+.-.....++.++.+||.|+|+. ||+|||+||.|++||. .-..+++|+|+|.......... ....
T Consensus 120 ~Dfk~ly~-tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVAS 195 (338)
T KOG0668|consen 120 TDFKQLYP-TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS 195 (338)
T ss_pred ccHHHHhh-hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeeh
Confidence 88765443 344455567889999999999999 9999999999999995 4569999999998765543322 1233
Q ss_pred cccCchhhh-hccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc--cc------------cccccccc------
Q 002186 849 AWTESGEFY-NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID--GL------------LGEMYNEN------ 907 (955)
Q Consensus 849 ~~~~~~e~~-~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~--~~------------~~~~~~~~------ 907 (955)
.++..||.. ....++..-|+|||||++.+|+..+.||..+.+..+.... .. ..-.+++.
T Consensus 196 RyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~ 275 (338)
T KOG0668|consen 196 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILG 275 (338)
T ss_pred hhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhh
Confidence 444455544 4455667779999999999999999999976654432211 00 00001110
Q ss_pred -----cc-CC-CCchH-HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 908 -----EV-GS-SSSLQ-DEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 908 -----~~-~~-~~~~~-~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
++ .. .+... -...+.++++-+.+..|..+|||++|++.
T Consensus 276 ~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 276 RHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred ccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 00 00 00000 11356778888889999999999999875
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-27 Score=265.41 Aligned_cols=236 Identities=20% Similarity=0.243 Sum_probs=175.9
Q ss_pred hhhhccCCCCC-ceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSA-AGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g-~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..+.+|.|+.| .||+|.. +|+.||||++-. ...+.+.+||..++.- +|||||++++.-.++.+.||+.|.|. .+
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~--e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~s 588 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVY-EGREVAVKRLLE--EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CS 588 (903)
T ss_pred cHHHcccCCCCcEEEEEee-CCceehHHHHhh--HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hh
Confidence 56778899887 4699987 688999999852 2344667899998765 59999999999999999999999995 69
Q ss_pred hhHHhhcC-CCH-----HHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---C--CCceECcccccccccccC
Q 002186 773 LSEKIRTK-RDW-----AAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---N--MEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 773 L~~~l~~~-~~~-----~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~--~~~ki~DfGl~~~~~~~~ 841 (955)
|+|++... .+. .....+..|++.|+++||+. +|||||+||+||||+. + .+++|+|||+++......
T Consensus 589 L~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 589 LQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred HHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence 99999873 111 22357789999999999998 9999999999999975 3 579999999998765544
Q ss_pred CCC-----cccccccCchhhhhccCCcccccchhHHHHHHHHHhC-CCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 842 GSF-----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN-GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 842 ~~~-----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
.+. ..++..+.+||.......+..+||+|+|||+|..+|| +.||......+..... ..+.-..+ .+ .
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~----~~~~L~~L--~~-~ 738 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT----GNYTLVHL--EP-L 738 (903)
T ss_pred chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc----Cccceeee--cc-C
Confidence 322 2245556788988888888899999999999999998 5666532211110000 11110001 11 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.++ +..+++.+++.+||..||++.+|+.+
T Consensus 739 ~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 739 PDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred chH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 122 56788899999999999999999753
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=245.23 Aligned_cols=234 Identities=17% Similarity=0.145 Sum_probs=177.0
Q ss_pred cccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc----hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT----RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 764 (955)
|+ ...++|+|+||+|..|... +.+.+|||+++++.. ..+--..|-++|+-- +-|.+|+++.++++.+..|.|
T Consensus 351 Fn--Fl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 351 FN--FLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cc--eEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 55 7789999999999999864 667899999986432 122233455555543 578999999999999999999
Q ss_pred EeecCCCChhHHhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~~~--~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+.||+|--+|++.. ..+....+|..||-||-|||+. +||.||+|..||++|.+|.+||+|||+++.--....
T Consensus 429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~ 505 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV 505 (683)
T ss_pred EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccccCCc
Confidence 99999999988888743 4455677899999999999999 999999999999999999999999999875332222
Q ss_pred C--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 843 S--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 843 ~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
. +-++++-|.+||+..+.+|+..+|.|||||+||||+.|+.||++.+.. +....+.+.. +. .+....+
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~------elF~aI~ehn-vs---yPKslSk 575 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED------ELFQAIMEHN-VS---YPKSLSK 575 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHHcc-Cc---CcccccH
Confidence 2 223677788999999999999999999999999999999999854421 1122222221 11 1122334
Q ss_pred HHHHHHHHccCCCCCCCCC
Q 002186 921 LVLDVALLCTRSTPSDRPS 939 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt 939 (955)
+.+++...-+...|.+|-.
T Consensus 576 EAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 576 EAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred HHHHHHHHHhhcCCccccC
Confidence 5556666667778888843
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-27 Score=237.97 Aligned_cols=247 Identities=20% Similarity=0.192 Sum_probs=184.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcC------CeeEEE
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------HQAYLL 764 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------~~~~lv 764 (955)
...-+|.|.- .|..|.. -.++.||+|++... ....+...+|...+..+.|+|||+++.++... .+.|+|
T Consensus 21 nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v 99 (369)
T KOG0665|consen 21 NLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLV 99 (369)
T ss_pred eecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHH
Confidence 4444566665 4444442 36889999998542 23466778999999999999999999998643 367999
Q ss_pred EeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-C
Q 002186 765 YDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-S 843 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-~ 843 (955)
||||. ++|..+++.+++..+...|..|++.|+.|+|+. +|+|||+||+||++..+..+||.|||+|+.....-. +
T Consensus 100 ~e~m~-~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mt 175 (369)
T KOG0665|consen 100 MELMD-ANLCQVILMELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMT 175 (369)
T ss_pred HHhhh-hHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccCcccccC
Confidence 99995 699999998889999999999999999999999 999999999999999999999999999975443311 1
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccc----------------cccccc--
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGL----------------LGEMYN-- 905 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~----------------~~~~~~-- 905 (955)
--..+.+|.+||+.-+..+.+.+||||.||++.||++|+..|.+...+.+|..... .+..+.
T Consensus 176 pyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~ 255 (369)
T KOG0665|consen 176 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENR 255 (369)
T ss_pred chhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcC
Confidence 11256788999999888899999999999999999999988886554444432100 000000
Q ss_pred -------------c-cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 906 -------------E-NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 906 -------------~-~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
. ......+...-......+++.+++..||++|-++++++++
T Consensus 256 ~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 256 PQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 0 0000000001122345688889999999999999999864
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=229.85 Aligned_cols=205 Identities=24% Similarity=0.322 Sum_probs=174.8
Q ss_pred ccCCCCCceEEEeCC-CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChhH
Q 002186 699 AARPQSAAGCKAVLP-TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE 775 (955)
Q Consensus 699 ~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~ 775 (955)
||+|.+|.||++... +|+.++||++..... ..+.+.+|++.+++++|++|+++++++......++||||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 589999999999975 489999999976543 25678899999999999999999999999999999999999999999
Q ss_pred HhhcC---CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-CCCceECcccccccccccC--CCCccccc
Q 002186 776 KIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLAD--GSFPAKIA 849 (955)
Q Consensus 776 ~l~~~---~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-~~~~ki~DfGl~~~~~~~~--~~~~~~~~ 849 (955)
++... .++..+..++.+++++++|||+. +++|+||+|.||+++. +..++++|||.+....... ........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTP 157 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCC
Confidence 99764 78899999999999999999999 9999999999999999 8999999999987554332 11112233
Q ss_pred ccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 850 WTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 850 ~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
.+.+||..... ..+.+.|+|++|++++|| ..+.+++..
T Consensus 158 ~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------------~~~~~~l~~ 196 (215)
T cd00180 158 AYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------------PELKDLIRK 196 (215)
T ss_pred CccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------HHHHHHHHH
Confidence 35667776665 778889999999999998 456788889
Q ss_pred ccCCCCCCCCCHHHHHHHh
Q 002186 929 CTRSTPSDRPSMEEALKLL 947 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~L 947 (955)
|++.||++||++.++++.+
T Consensus 197 ~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 197 MLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HhhCCcccCcCHHHHhhCC
Confidence 9999999999999998753
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-27 Score=234.30 Aligned_cols=249 Identities=21% Similarity=0.253 Sum_probs=183.0
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----eeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-----QAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~lv~ 765 (955)
...-||-|+||+|+.++.+ +|+.||.|++..- -...+.+-+|++++.-.+|.|+...++.-+... +.|.|+
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 5677999999999999976 7999999998642 234567778899999999999999998876543 678899
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
|.|. .||.+.|-. .++-...+-+.+||.+||.|||+. +|.||||||.|.|++++...||+|||+++........
T Consensus 137 ELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~ 212 (449)
T KOG0664|consen 137 ELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL 212 (449)
T ss_pred HHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchhhhh
Confidence 9986 478777754 445556677889999999999999 9999999999999999999999999999876544332
Q ss_pred C---cccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cccc----------------c
Q 002186 844 F---PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLG----------------E 902 (955)
Q Consensus 844 ~---~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~~----------------~ 902 (955)
. ...+.||.+||+..+ ..|+..+||||.|||+.|++-++..|....++++.... +.++ .
T Consensus 213 hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H 292 (449)
T KOG0664|consen 213 NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNH 292 (449)
T ss_pred hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHH
Confidence 2 124678899998765 57899999999999999999988877755443321111 0000 0
Q ss_pred cccccccCCC-------CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 002186 903 MYNENEVGSS-------SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 947 (955)
Q Consensus 903 ~~~~~~~~~~-------~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L 947 (955)
++.......+ ......-.+.+++....+..||++|.+.++.+..+
T Consensus 293 ~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 293 VLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 1111100000 00111223455666778899999999999887653
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-27 Score=250.84 Aligned_cols=234 Identities=16% Similarity=0.134 Sum_probs=182.8
Q ss_pred hhhhccCCCCCceEEEeCCCCc-EEEEEEeecc----cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGI-TVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~-~vAvK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
....+|-|+||.|-.+...... .+|+|.+++. ..+.+....|-.+|...+.|.||+++.-|.+...+|+.||-|-
T Consensus 424 ~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaCl 503 (732)
T KOG0614|consen 424 RIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACL 503 (732)
T ss_pred hhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhc
Confidence 5667899999999887765433 5899998763 2345567788899999999999999999999999999999999
Q ss_pred CCChhHHhhcCCC--HHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-cc
Q 002186 770 NGNLSEKIRTKRD--WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF-PA 846 (955)
Q Consensus 770 ~gsL~~~l~~~~~--~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~-~~ 846 (955)
||.+...++++.. -.+...++..+.+|++|||++ +||.||+||+|.++|.+|.+|+.|||+|+........- -+
T Consensus 504 GGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFc 580 (732)
T KOG0614|consen 504 GGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFC 580 (732)
T ss_pred CchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccCCceeeec
Confidence 9999999988554 445567888999999999999 99999999999999999999999999998776544322 23
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
+++.|.+||+.-....+..+|.||+|+++||++||++||.+.+++...... ..-++....+ ....+...+++
T Consensus 581 GTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~I---LkGid~i~~P-----r~I~k~a~~Li 652 (732)
T KOG0614|consen 581 GTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLI---LKGIDKIEFP-----RRITKTATDLI 652 (732)
T ss_pred CCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH---Hhhhhhhhcc-----cccchhHHHHH
Confidence 778889999998888899999999999999999999999866554322111 1111111111 12224455666
Q ss_pred HHccCCCCCCCCC
Q 002186 927 LLCTRSTPSDRPS 939 (955)
Q Consensus 927 ~~Cl~~dp~~RPt 939 (955)
.+.+..+|.+|-.
T Consensus 653 k~LCr~~P~ERLG 665 (732)
T KOG0614|consen 653 KKLCRDNPTERLG 665 (732)
T ss_pred HHHHhcCcHhhhc
Confidence 6767889999865
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=242.43 Aligned_cols=194 Identities=15% Similarity=0.162 Sum_probs=157.5
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
...-||-|+||+|..+. ..+...+|+|.+++... +......|-.+|+.-..+-||+|+-.|++++..|+||||++
T Consensus 633 kik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIP 712 (1034)
T KOG0608|consen 633 KIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIP 712 (1034)
T ss_pred EEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccC
Confidence 67789999999999887 56777899999976432 23346778899999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCHH--HHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc---------c
Q 002186 770 NGNLSEKIRTKRDWA--AKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT---------Q 838 (955)
Q Consensus 770 ~gsL~~~l~~~~~~~--~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~---------~ 838 (955)
|||+-.+|-+..-++ -...++..+..|+++.|.. ++|||||||.|||||.+|.+|+.|||++.-+ +
T Consensus 713 GGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq 789 (1034)
T KOG0608|consen 713 GGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 789 (1034)
T ss_pred CccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceecccccccc
Confidence 999999887644333 3345667899999999999 9999999999999999999999999986321 1
Q ss_pred ccCC-----------------------------------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCC
Q 002186 839 LADG-----------------------------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGR 883 (955)
Q Consensus 839 ~~~~-----------------------------------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~ 883 (955)
.... +...++..|.+||++....++--+|.||.|||||||+.|+.
T Consensus 790 ~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~ 869 (1034)
T KOG0608|consen 790 EGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQP 869 (1034)
T ss_pred CCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCC
Confidence 1100 01124556778888888888888999999999999999999
Q ss_pred CCCCCCCC
Q 002186 884 LTNAGSSL 891 (955)
Q Consensus 884 p~~~~~~~ 891 (955)
||.+....
T Consensus 870 pf~~~tp~ 877 (1034)
T KOG0608|consen 870 PFLADTPG 877 (1034)
T ss_pred CccCCCCC
Confidence 99865543
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.9e-24 Score=269.64 Aligned_cols=339 Identities=19% Similarity=0.255 Sum_probs=205.8
Q ss_pred CccccCCCCCCEEEccCCc------CCccCCccccCCC-CCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCC
Q 002186 118 PVEIFNLTSLISLDISRNN------FSGHFPGGIQSLR-NLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIP 190 (955)
Q Consensus 118 p~~~~~l~~L~~L~Ls~N~------l~~~~p~~~~~l~-~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p 190 (955)
+.+|.++++|++|.+..+. +...+|..|..++ +|+.|++.+|.+. .+|..+ ...+|++|+|++|.+. .+|
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccc
Confidence 3456777777777776553 2334566666653 5777777777665 566665 4577777777777766 466
Q ss_pred CCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCC
Q 002186 191 SQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTK 270 (955)
Q Consensus 191 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~ 270 (955)
..+..+++|+.|+|++|...+.+|. ++.+++|+.|++++|.....+|..++++++|+.|++++|..-+.+|..+ ++++
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~s 705 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKS 705 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCC
Confidence 6677777777777777655555663 6677777777777776666777777777777777777765555666554 6777
Q ss_pred CCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCC-------CCCccccCCCCCc
Q 002186 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS-------GTVPESLVQLPSL 343 (955)
Q Consensus 271 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-------~~~p~~l~~l~~L 343 (955)
|+.|++++|...+.+|.. .++|+.|++++|.+. .+|..+ .+++|+.|++..+... ...+......++|
T Consensus 706 L~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL 780 (1153)
T PLN03210 706 LYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSL 780 (1153)
T ss_pred CCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccc
Confidence 777777777655555532 346777777777765 345444 4666777766653211 1111122234567
Q ss_pred cEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCC
Q 002186 344 EILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDN 423 (955)
Q Consensus 344 ~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N 423 (955)
+.|++++|...+.+|..++++++|+.|++++|...+.+|..+ .+.+|+.|++++|.....+|.. .++|+.|+|++|
T Consensus 781 ~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n 856 (1153)
T PLN03210 781 TRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRT 856 (1153)
T ss_pred hheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCC
Confidence 777777776666677777777777777777665444565543 3445555555555443333322 245555555555
Q ss_pred ccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCC
Q 002186 424 SFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNN 471 (955)
Q Consensus 424 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N 471 (955)
.++ .+|.++..+++|++|++++|+-...+|..+..+++|+.+++++|
T Consensus 857 ~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 857 GIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred CCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCC
Confidence 554 34555555555555555553322234444444555555555544
|
syringae 6; Provisional |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-23 Score=264.42 Aligned_cols=341 Identities=21% Similarity=0.249 Sum_probs=268.9
Q ss_pred CCccccCCCCCcEEeCCCCC------CCCCCchhhcCCC-cceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCC
Q 002186 141 FPGGIQSLRNLLVLDAFSNS------FSGSVPAEISQLE-HLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQI 213 (955)
Q Consensus 141 ~p~~~~~l~~L~~LdL~~N~------l~~~~p~~~~~L~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 213 (955)
.+.+|..+++|++|.+..+. +...+|..+..++ +|+.|++.+|.+. .+|..| ...+|+.|+|.+|++. .+
T Consensus 550 ~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L 626 (1153)
T PLN03210 550 HENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KL 626 (1153)
T ss_pred cHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cc
Confidence 34568889999999997653 3345777777764 6999999999886 678877 5799999999999986 57
Q ss_pred chhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCC
Q 002186 214 PAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVT 293 (955)
Q Consensus 214 p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 293 (955)
|..+..+++|+.|+++++...+.+|. +..+++|++|++++|.....+|..+.++++|+.|++++|.....+|..+ +++
T Consensus 627 ~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~ 704 (1153)
T PLN03210 627 WDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLK 704 (1153)
T ss_pred ccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCC
Confidence 88889999999999998876677774 7889999999999988778899999999999999999987666777655 789
Q ss_pred ccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcC-------cccCCcccCCCCC
Q 002186 294 TLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF-------SGSLPENLGRNSK 366 (955)
Q Consensus 294 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l-------~~~~p~~~~~~~~ 366 (955)
+|+.|++++|...+.+|.. ..+|+.|++++|.+. .+|..+ .+++|+.|.+.++.. ....|......++
T Consensus 705 sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~s 779 (1153)
T PLN03210 705 SLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPS 779 (1153)
T ss_pred CCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhcccc
Confidence 9999999998766666643 467899999999986 566655 578888888876432 1112222334467
Q ss_pred CCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCC
Q 002186 367 LRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSR 446 (955)
Q Consensus 367 L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 446 (955)
|+.|++++|...+.+|..+..+.+|+.|++++|...+.+|..+ ++++|+.|++++|.....+|.. .++|+.|+|++
T Consensus 780 L~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~ 855 (1153)
T PLN03210 780 LTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSR 855 (1153)
T ss_pred chheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCC
Confidence 8899999988888888888888889999998887666777665 6888999999888665555543 35788889999
Q ss_pred CcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccc
Q 002186 447 NGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACN 497 (955)
Q Consensus 447 N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~ 497 (955)
|.++ .+|..+..+++|++|++++|+.+.. +|.....+++|+.+++++|.
T Consensus 856 n~i~-~iP~si~~l~~L~~L~L~~C~~L~~-l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 856 TGIE-EVPWWIEKFSNLSFLDMNGCNNLQR-VSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCc-cChHHHhcCCCCCEEECCCCCCcCc-cCcccccccCCCeeecCCCc
Confidence 8887 5788888888899999888766654 66667777788888887774
|
syringae 6; Provisional |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-25 Score=224.26 Aligned_cols=241 Identities=16% Similarity=0.134 Sum_probs=175.3
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccch----HHHHHHHHHHHh-ccCCCCceeEeEEEEcCCeeEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR----IKIVSEFITRIG-TVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~----~~~~~~e~~~l~-~l~H~niv~l~g~~~~~~~~~lv 764 (955)
|. ...+||+|+|++|..+++ .+.+.+|+|++++.... .+-...|-.+.. .-+||.+|.++.+++++...+.|
T Consensus 252 f~--ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 252 FD--LLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ce--eeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 55 678899999999999985 57889999999864322 222333333332 34799999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC-
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD- 841 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~- 841 (955)
.||+++|+|--++++ +++......+...|.-||.|||++ +||.||+|..|||+|..+.+|+.|+|+++.--...
T Consensus 330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l~~gd 406 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGD 406 (593)
T ss_pred EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCCCCCc
Confidence 999999999766654 455555566788899999999999 99999999999999999999999999987532221
Q ss_pred -CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCC-CCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 -GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTN-AGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 -~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
.++-++++.|.+||+..+..|...+|.|++||+|+||+.|+.||+ -+....+..-.+.+-+++-+..+..+.. ..
T Consensus 407 ~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprs---ls 483 (593)
T KOG0695|consen 407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRS---LS 483 (593)
T ss_pred ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccce---ee
Confidence 223347778899999999999999999999999999999999998 2221111111111112211211221211 12
Q ss_pred HHHHHHHHHccCCCCCCCCC
Q 002186 920 KLVLDVALLCTRSTPSDRPS 939 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt 939 (955)
.+.-.+...-+.+||++|-.
T Consensus 484 vkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 484 VKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred hhhHHHHHHhhcCCcHHhcC
Confidence 23345555677889998853
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-24 Score=227.18 Aligned_cols=124 Identities=21% Similarity=0.267 Sum_probs=109.3
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccC-----C---CCceeEeEEEEcC----Cee
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----H---KNLIRLLGFCYNR----HQA 761 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-----H---~niv~l~g~~~~~----~~~ 761 (955)
...++|.|.|++|+.|- ..+.+.||+|+.+..++-.+....||++|++++ | ..||+|+++|... .++
T Consensus 82 v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HV 161 (590)
T KOG1290|consen 82 VQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHV 161 (590)
T ss_pred EEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEE
Confidence 78899999999999998 457789999999877777888889999999885 3 3799999999853 489
Q ss_pred EEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC
Q 002186 762 YLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~ 821 (955)
+||+||. |-+|..+|.. .++....++|++||+.||.|||..| +|||-||||+|||+.
T Consensus 162 CMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 162 CMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred EEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 9999999 5689999864 6788899999999999999999998 999999999999983
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.2e-25 Score=215.28 Aligned_cols=251 Identities=14% Similarity=0.118 Sum_probs=173.4
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeE-EEEcCCeeE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLG-FCYNRHQAY 762 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g-~~~~~~~~~ 762 (955)
++.+.|. ..+.+|+|.||.+-.++. ++.+.+++|.+.......++|.+|...=-.+ .|.|||.-++ .+++.+.+.
T Consensus 21 ~l~d~y~--I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 21 DLEDVYT--INKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred chhhhhh--HHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 4445677 888999999999999985 5677899999987777788888876552223 4999998765 577888999
Q ss_pred EEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC--CCCCceECcccccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--ENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~--~~~~~ki~DfGl~~~~~~ 839 (955)
.++||+|.|||..-+.. ......-++++.|++.|+.|||+. .+||||||.+|||+- +..++|++|||..+....
T Consensus 99 F~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred EeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 99999999999988865 445566788999999999999999 999999999999994 345799999998764332
Q ss_pred cCCCCcccccccCchhhhhc-----cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC--CccccccccccccccccCCC
Q 002186 840 ADGSFPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ--NKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 840 ~~~~~~~~~~~~~~~e~~~~-----~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 912 (955)
.-........ |.+||.... ....+.+|||.||+|++..+||+.|+..+.... .|..... ........+
T Consensus 176 tV~~~~~~~~-y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w----~~rk~~~~P 250 (378)
T KOG1345|consen 176 TVKYLEYVNN-YHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQW----LKRKNPALP 250 (378)
T ss_pred eehhhhhhcc-cCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHH----hcccCccCc
Confidence 2111111223 444444332 234455799999999999999999998332111 1111111 011000111
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
........+++++-.+-+..+|++|-...++-++
T Consensus 251 ~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 251 KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred hhhcccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 1112223445556667788899999666665544
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-25 Score=242.98 Aligned_cols=243 Identities=15% Similarity=0.165 Sum_probs=183.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
....+|.|.||.||||+. .+|+..|||.++.... ..+...+||-+++..+|||||.++|-|..++..+++||||.+|+
T Consensus 19 llqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggs 98 (829)
T KOG0576|consen 19 LLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGS 98 (829)
T ss_pred heeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCc
Confidence 778899999999999995 5899999999987543 35566788999999999999999999999999999999999999
Q ss_pred hhHHhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcccc
Q 002186 773 LSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 848 (955)
Q Consensus 773 L~~~l~~~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~ 848 (955)
|++.-+.. +...+...+++...+|++|+|+. +-+|||||-.|||+.+.+.+|++|||.+..+...-. ..-.++
T Consensus 99 lQdiy~~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGt 175 (829)
T KOG0576|consen 99 LQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGT 175 (829)
T ss_pred ccceeeecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCC
Confidence 99987764 44556677889999999999998 889999999999999999999999998754322111 111266
Q ss_pred cccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 849 AWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 849 ~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
+|+++||+.. ...|..++|||+.|+...|+---+.|.++-...+.. .-+-...+++........+ ...+-++
T Consensus 176 pywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l--~LmTkS~~qpp~lkDk~kw---s~~fh~f 250 (829)
T KOG0576|consen 176 PYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRAL--FLMTKSGFQPPTLKDKTKW---SEFFHNF 250 (829)
T ss_pred ccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHH--HHhhccCCCCCcccCCccc---hHHHHHH
Confidence 7788887653 346888999999999999998776665432221110 0011112222222222222 3445677
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 002186 926 ALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+..|+-.+|++|||++..+.
T Consensus 251 vK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 251 VKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHHhcCCCccCCChhhhee
Confidence 77899999999999886543
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=220.01 Aligned_cols=190 Identities=19% Similarity=0.207 Sum_probs=161.4
Q ss_pred hhhhccCCCCCceEEEeCCC-CcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPT-GITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~-g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.+|.|++|.||+|...+ ++.+|+|.+..... ..+.+.+|++.+++++|+|++++++++...+..++|+||++++
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 82 (225)
T smart00221 3 LGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGG 82 (225)
T ss_pred eeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCC
Confidence 45778999999999999764 89999999976433 4667888999999999999999999999989999999999999
Q ss_pred ChhHHhhc--C-CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---CCCc
Q 002186 772 NLSEKIRT--K-RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFP 845 (955)
Q Consensus 772 sL~~~l~~--~-~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~---~~~~ 845 (955)
+|.+++.. . .++.....++.+++++++|+|.. +++|+|++|.||+++.++.++++|||.+....... ....
T Consensus 83 ~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 159 (225)
T smart00221 83 DLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV 159 (225)
T ss_pred CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence 99999975 3 68888899999999999999998 99999999999999999999999999987654332 1111
Q ss_pred ccccccCchhhh-hccCCcccccchhHHHHHHHHHhCCCCCCC
Q 002186 846 AKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTNGRLTNA 887 (955)
Q Consensus 846 ~~~~~~~~~e~~-~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~ 887 (955)
.....+.+||.. .....+.++||||||++++||++|+.||..
T Consensus 160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 233346677776 556677799999999999999999999864
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.1e-25 Score=231.90 Aligned_cols=248 Identities=16% Similarity=0.161 Sum_probs=187.7
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccC------CCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR------HKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~------H~niv~l~g~~~~~~~~~lv~ey 767 (955)
.....|+|-|++|.+|.. ..|..||||+|.......+.=..|+++|+++. --|+++++..|.+.++.|||+|-
T Consensus 436 V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~ 515 (752)
T KOG0670|consen 436 VQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEP 515 (752)
T ss_pred EEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehh
Confidence 556679999999999995 46889999999877666666678899999885 34899999999999999999998
Q ss_pred cCCCChhHHhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC-CCceECcccccccccccC
Q 002186 768 LPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 768 ~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~-~~~ki~DfGl~~~~~~~~ 841 (955)
+. .+|.++|++ .+.......++.|+.-||..|-.. +|+|.||||.|||+.+. ..+|+||||-|.......
T Consensus 516 Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ene 591 (752)
T KOG0670|consen 516 LS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGSASFASENE 591 (752)
T ss_pred hh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCcccccccccc
Confidence 74 689999986 345667778999999999999988 99999999999999865 568999999886544322
Q ss_pred CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc-------------cc-c-cccccccc
Q 002186 842 GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-------------ID-G-LLGEMYNE 906 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~-------------~~-~-~~~~~~~~ 906 (955)
-..-....+|.+||++.+.+|+...|+||.||.|||+.||+..|++..+.+..- +. + ...+.+|.
T Consensus 592 itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~ 671 (752)
T KOG0670|consen 592 ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQ 671 (752)
T ss_pred ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhccc
Confidence 211113456889999999999999999999999999999998887543321100 00 0 00000000
Q ss_pred ------------------------cc--------cC---CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 907 ------------------------NE--------VG---SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 907 ------------------------~~--------~~---~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.| +. .+......+..+.++.-.|+..||++|-|..|++++
T Consensus 672 d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 672 DLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred ccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 00 00 011123456678899999999999999999998864
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-24 Score=231.09 Aligned_cols=190 Identities=21% Similarity=0.177 Sum_probs=158.0
Q ss_pred chhhhccCCCCCceEEEeCCC-CcEEEEEEeecccch---------HHHHHHHHHHHhccC---CCCceeEeEEEEcCCe
Q 002186 694 TECEEAARPQSAAGCKAVLPT-GITVSVKKIEWGATR---------IKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~~~~-g~~vAvK~~~~~~~~---------~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~ 760 (955)
...+.+|+|+||.|..|+.+. ...|+||.+.+.+.- ......||++|++++ |+||++++.++++++.
T Consensus 564 ttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~ 643 (772)
T KOG1152|consen 564 TTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDY 643 (772)
T ss_pred eeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCe
Confidence 378899999999999999654 557899998754321 123467899999998 9999999999999999
Q ss_pred eEEEEeecC-CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 761 AYLLYDYLP-NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 761 ~~lv~ey~~-~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
+||+||--. +-||.++|.. .++..+...|+.||+.|+++||+. +|||||||-+||.+|.+|-+|++|||-+...
T Consensus 644 yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfgsaa~~ 720 (772)
T KOG1152|consen 644 YYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFGSAAYT 720 (772)
T ss_pred eEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeeccchhhh
Confidence 999999754 4499999965 567778889999999999999999 9999999999999999999999999998766
Q ss_pred cccCCCCcccccccCchhhhhccCCcc-cccchhHHHHHHHHHhCCCCCC
Q 002186 838 QLADGSFPAKIAWTESGEFYNAMKEEM-YMDVYGFGEIILEILTNGRLTN 886 (955)
Q Consensus 838 ~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~DV~S~Gvvl~Elltg~~p~~ 886 (955)
+...-..-.++..|++||+..+.+|.- .-|||++||++|.++...-|++
T Consensus 721 ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 721 KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 543322222555689999998887654 4799999999999999888875
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.8e-26 Score=233.75 Aligned_cols=273 Identities=22% Similarity=0.280 Sum_probs=182.3
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCC-CCCCCCCchhhcCCCcceEEEec
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS-NSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~-N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
-+.++|..|.|+.+.|.+|..+++||.||||+|+|+.+-|++|.+|++|..|-+-+ |+|+......|++|..|+.|.+.
T Consensus 69 tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 69 TVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred ceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcC
Confidence 46689999999998899999999999999999999999999999999988876655 89996666679999999999999
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccC--CCCc----------cccCCCCCcE
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG--NIPW----------QLGNMSEVQY 249 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g--~~p~----------~~~~l~~L~~ 249 (955)
-|.+.-...+.|..+++|..|.+..|.+...-..++..+..++.+.+..|.+-. .+|+ .++...-..-
T Consensus 149 an~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p 228 (498)
T KOG4237|consen 149 ANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSP 228 (498)
T ss_pred hhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecch
Confidence 999998888999999999999999999975555588899999999888876321 1111 1111111111
Q ss_pred EeccCCCCCCCCCccccCCCCCCEE--Ee-ccccccccCCc-cCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecc
Q 002186 250 LDIAGANLSGSIPKELSNLTKLESL--FL-FRNQLAGQVPW-EFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325 (955)
Q Consensus 250 L~Ls~n~l~~~~p~~l~~l~~L~~L--~L-~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 325 (955)
..+.+..+...-+..+.. +++.+ .+ +.+...+.-|. .|..+++|+.|+|++|+++++-+.+|.++..++.|.|.
T Consensus 229 ~rl~~~Ri~q~~a~kf~c--~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~ 306 (498)
T KOG4237|consen 229 YRLYYKRINQEDARKFLC--SLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLT 306 (498)
T ss_pred HHHHHHHhcccchhhhhh--hHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcC
Confidence 122222222111111111 11111 11 11212222222 35666666666666666666666666666666666666
Q ss_pred cccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcc
Q 002186 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNF 377 (955)
Q Consensus 326 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l 377 (955)
.|++...-...|.++..|+.|+|.+|+++-..|..|..+.+|..|++-.|.+
T Consensus 307 ~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 307 RNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred cchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 6666544444555666666666666666666666666555666555555544
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-23 Score=217.63 Aligned_cols=196 Identities=17% Similarity=0.201 Sum_probs=156.1
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeCC----CCcEEEEEEeecccchHHHHHHHHHHHhccC-CCCceeEeEEEEcCC
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRH 759 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~ 759 (955)
..+.+.|. ..++||+|.|++||+|++. ..+.||+|.+..... ......|++.|.++. |.||+++.++...++
T Consensus 32 p~~~~~~~--~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 32 PFISNAYK--VVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-PSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhh--hhccccccchhhhhhhhHhhhccccceEeeeecccccC-chHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 34445566 8899999999999999853 467899999975543 344778899998875 899999999999999
Q ss_pred eeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-CCCceECccccccccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-~~~~ki~DfGl~~~~~ 838 (955)
++.+|+||++.-+..++... .+..+...+.+.+.+||+|+|+. +||||||||+|+|.+. .+.-.+.|||+|...+
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~-l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d 184 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS-LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYD 184 (418)
T ss_pred eeEEEecccCccCHHHHHhc-CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHHHH
Confidence 99999999999888777654 66888888999999999999999 9999999999999985 4667899999986210
Q ss_pred cc-----------------C----------------C-------------CCcccccccCchhhhh-ccCCcccccchhH
Q 002186 839 LA-----------------D----------------G-------------SFPAKIAWTESGEFYN-AMKEEMYMDVYGF 871 (955)
Q Consensus 839 ~~-----------------~----------------~-------------~~~~~~~~~~~~e~~~-~~~~~~~~DV~S~ 871 (955)
.. . + ...++++++.+||+.. ....++++||||.
T Consensus 185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~ 264 (418)
T KOG1167|consen 185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSA 264 (418)
T ss_pred hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeec
Confidence 00 0 0 0012344455666553 4567888999999
Q ss_pred HHHHHHHHhCCCCCCC
Q 002186 872 GEIILEILTNGRLTNA 887 (955)
Q Consensus 872 Gvvl~Elltg~~p~~~ 887 (955)
|||++-+++++.||..
T Consensus 265 GVI~Lslls~~~PFf~ 280 (418)
T KOG1167|consen 265 GVILLSLLSRRYPFFK 280 (418)
T ss_pred cceeehhhcccccccc
Confidence 9999999999999984
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-23 Score=258.97 Aligned_cols=190 Identities=17% Similarity=0.212 Sum_probs=136.0
Q ss_pred ccCC-CCceeEeEEE-------EcCCeeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 002186 742 TVRH-KNLIRLLGFC-------YNRHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPH 810 (955)
Q Consensus 742 ~l~H-~niv~l~g~~-------~~~~~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiH 810 (955)
+.+| +||++++++| .+.+.++.+|||+ +++|.++|+. .+++.+...|+.||++||+|||+. +|+|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIvH 103 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIVV 103 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---Ceee
Confidence 3456 6888888887 2334567888988 5699999964 367888899999999999999998 9999
Q ss_pred CCCCCCCeeeC-------------------CCCCceECcccccccccccC------------------CCCcccccccCc
Q 002186 811 GDLKASNIVFD-------------------ENMEPHLAEFGFKYLTQLAD------------------GSFPAKIAWTES 853 (955)
Q Consensus 811 rdlk~~NiLl~-------------------~~~~~ki~DfGl~~~~~~~~------------------~~~~~~~~~~~~ 853 (955)
|||||+|||++ .++.+|++|||+++...... .....++.+|++
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 99999999994 45667888888876421100 000124567899
Q ss_pred hhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCC
Q 002186 854 GEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRST 933 (955)
Q Consensus 854 ~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~d 933 (955)
||+..+..++.++|||||||++|||++|..|+..... ...........+ ..........+++.+||++|
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~L~~~ 252 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----TMSSLRHRVLPP-------QILLNWPKEASFCLWLLHPE 252 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----HHHHHHHhhcCh-------hhhhcCHHHHHHHHHhCCCC
Confidence 9998888899999999999999999998776542110 000010111111 11111234557788999999
Q ss_pred CCCCCCHHHHHHH
Q 002186 934 PSDRPSMEEALKL 946 (955)
Q Consensus 934 p~~RPt~~ev~~~ 946 (955)
|.+||+|.|++++
T Consensus 253 P~~Rps~~eil~h 265 (793)
T PLN00181 253 PSCRPSMSELLQS 265 (793)
T ss_pred hhhCcChHHHhhc
Confidence 9999999999863
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.6e-23 Score=200.33 Aligned_cols=242 Identities=19% Similarity=0.291 Sum_probs=175.2
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
...++.+...|+.++|+.. |..+++|++...+. -.+.|.+|.-.++-..||||++++|.|..+....++..|||.|
T Consensus 194 l~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~g 272 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFG 272 (448)
T ss_pred hhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccch
Confidence 4566788999999999985 45566687765433 3567888988898899999999999999999999999999999
Q ss_pred ChhHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceEC--cccccccccccCCCCc
Q 002186 772 NLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA--EFGFKYLTQLADGSFP 845 (955)
Q Consensus 772 sL~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~--DfGl~~~~~~~~~~~~ 845 (955)
||+.++++. .+..+..+++.++|+|++|||+. .|-|.---+.+..|++|++.++||+ |--++ ++.. + ..
T Consensus 273 slynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfs--fqe~-g-r~ 347 (448)
T KOG0195|consen 273 SLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFS--FQEV-G-RA 347 (448)
T ss_pred HHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceee--eecc-c-cc
Confidence 999999984 36788899999999999999986 4345555689999999999999885 22121 1111 1 11
Q ss_pred ccccccCchhhhhccC---CcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 846 AKIAWTESGEFYNAMK---EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~~---~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...+| .+||.....+ .-..+|+|||.|++||+.|+..||.+-.+.+-... ..++.. ... .++ .....+
T Consensus 348 y~paw-mspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk-ialegl-rv~---ipp---gis~hm 418 (448)
T KOG0195|consen 348 YSPAW-MSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK-IALEGL-RVH---IPP---GISRHM 418 (448)
T ss_pred cCccc-CCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh-hhhccc-ccc---CCC---CccHHH
Confidence 12343 4456554332 23457999999999999999999875443321111 111111 111 112 233456
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
-+++.-|+.+||.+||.++.|+-.|++++
T Consensus 419 ~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 419 NKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 67777799999999999999999999875
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.1e-24 Score=220.67 Aligned_cols=276 Identities=24% Similarity=0.242 Sum_probs=183.6
Q ss_pred cEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccC-CcCCccCCccccCCCCCcEE
Q 002186 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISR-NNFSGHFPGGIQSLRNLLVL 154 (955)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 154 (955)
..+.+.|..++++-.-+..+.. +++||+||||+|+|+.+-|.+|.+|.+|..|-+.+ |+|+...-+.|++|..|+.|
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~--l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrL 145 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKT--LHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRL 145 (498)
T ss_pred cceEEEeccCCcccCChhhccc--hhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHH
Confidence 3577888888887443344444 89999999999999999999999999999988766 89997777789999999999
Q ss_pred eCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCC------------CCCchhccCCCC
Q 002186 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN------------DQIPAELGMLKT 222 (955)
Q Consensus 155 dL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~------------~~~p~~l~~l~~ 222 (955)
.+.-|++.-.....|..|++|..|.|..|.+...--.+|..+.+++++.+..|.+- -..|..++..+-
T Consensus 146 llNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc 225 (498)
T KOG4237|consen 146 LLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARC 225 (498)
T ss_pred hcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhccccee
Confidence 99999999888889999999999999999998544458999999999999999842 122333333332
Q ss_pred CcEEecccccccCCCCcccc-CCCCCcEEeccCCCCCCCCC-ccccCCCCCCEEEeccccccccCCccCcCCCccCEEEc
Q 002186 223 VTHMEIGYNFYQGNIPWQLG-NMSEVQYLDIAGANLSGSIP-KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300 (955)
Q Consensus 223 L~~L~l~~n~l~g~~p~~~~-~l~~L~~L~Ls~n~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 300 (955)
..-..+.++.+...-+..+. .+..+..--.+.+...+.-| ..|..|++|+.|+|++|+++++-+.+|..+..+++|.|
T Consensus 226 ~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L 305 (498)
T KOG4237|consen 226 VSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYL 305 (498)
T ss_pred cchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhc
Confidence 22222222222111111110 01111110111122222333 23556666666666666666666666666666666666
Q ss_pred cCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcC
Q 002186 301 SDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353 (955)
Q Consensus 301 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l 353 (955)
..|++...-...|.++..|+.|+|+.|+++..-|..|..+.+|..|++-.|.+
T Consensus 306 ~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 306 TRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred CcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 66666655555566666666666666666666666666666666666665554
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.3e-22 Score=198.22 Aligned_cols=164 Identities=19% Similarity=0.189 Sum_probs=121.1
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccc
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 847 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~ 847 (955)
|+|.++++. .++|.+...|+.|+++||+|||+. + ||+||+++.++.+|+ ||+++....... .+
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~---~g 66 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQS---RV 66 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccccC---CC
Confidence 789999974 378999999999999999999988 4 999999999999999 999876543221 23
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH--HHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK--LVLDV 925 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l 925 (955)
...|++||+..+..++.++|||||||++|||+||+.|+......... ............ ............ .+.++
T Consensus 67 ~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 144 (176)
T smart00750 67 DPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAI-LEILLNGMPADD-PRDRSNLESVSAARSFADF 144 (176)
T ss_pred cccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHH-HHHHHHHhccCC-ccccccHHHHHhhhhHHHH
Confidence 46688999998888999999999999999999999998643321110 111111111110 000111122222 58899
Q ss_pred HHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 926 ALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+.+||..||++||++.|+++++..+
T Consensus 145 i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 145 MRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HHHHHhcccccccCHHHHHHHHHHH
Confidence 9999999999999999999987654
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.7e-21 Score=224.49 Aligned_cols=265 Identities=23% Similarity=0.337 Sum_probs=140.1
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
-..|||++|.|+ .+|..+. ++|+.|++++|+++. +|. .+++|++|+|++|+++. +|.. .++|+.|+|++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCc-ccCc---ccccceeeccC
Confidence 445666666665 4555444 356666666666553 332 13455555555555552 3322 23455555555
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p 262 (955)
|.++ .+|..+ ++|+.|++++|+++. +| . ..++|+.|++++|++++ +|
T Consensus 272 N~L~-~Lp~lp---~~L~~L~Ls~N~Lt~-LP------------------------~---~p~~L~~LdLS~N~L~~-Lp 318 (788)
T PRK15387 272 NPLT-HLPALP---SGLCKLWIFGNQLTS-LP------------------------V---LPPGLQELSVSDNQLAS-LP 318 (788)
T ss_pred Cchh-hhhhch---hhcCEEECcCCcccc-cc------------------------c---cccccceeECCCCcccc-CC
Confidence 5544 233211 334445555554432 22 1 12345555555555553 23
Q ss_pred ccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCC
Q 002186 263 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342 (955)
Q Consensus 263 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 342 (955)
.. ..+|+.|++++|++++ +|.. ..+|+.|+|++|+|++ +|.. ..+|+.|++++|+++. +|.. .++
T Consensus 319 ~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~ 383 (788)
T PRK15387 319 AL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSG 383 (788)
T ss_pred CC---cccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccc
Confidence 21 1234555555665553 2321 1356666666666663 3332 2345555666666653 4432 234
Q ss_pred ccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcC
Q 002186 343 LEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLED 422 (955)
Q Consensus 343 L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~ 422 (955)
|+.|++++|++++ +|.. .++|+.|++++|.++ .+|. . ..+|+.|++++
T Consensus 384 L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sIP~------------------------l---~~~L~~L~Ls~ 431 (788)
T PRK15387 384 LKELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SLPM------------------------L---PSGLLSLSVYR 431 (788)
T ss_pred cceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CCCc------------------------c---hhhhhhhhhcc
Confidence 5666666666653 3332 134555666666554 2332 1 23567788888
Q ss_pred CccccccchhccCCCCCCEEECCCCcCCCCCCcchhh
Q 002186 423 NSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQ 459 (955)
Q Consensus 423 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~ 459 (955)
|+|+ .+|..+.++++|+.|+|++|+|++.+|..+..
T Consensus 432 NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 432 NQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred Cccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 8887 67888888888888888888888877766543
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=222.66 Aligned_cols=263 Identities=24% Similarity=0.300 Sum_probs=154.4
Q ss_pred CCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccC
Q 002186 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 206 (955)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 206 (955)
-..|||++|.++ .+|..+. ++|+.|++++|+++. +|.. +++|++|+|++|.++. +|.. .++|+.|++++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccCc-ccCc---ccccceeeccC
Confidence 445566665555 3444443 245555555555552 3321 2445555555554442 2321 23444444444
Q ss_pred CCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCC
Q 002186 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP 286 (955)
Q Consensus 207 N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 286 (955)
|.+ . .+|.. .++|+.|++++|+++. +|.. +++|+.|++++|++++. |
T Consensus 272 N~L------------------------~-~Lp~l---p~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~L-p 318 (788)
T PRK15387 272 NPL------------------------T-HLPAL---PSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-P 318 (788)
T ss_pred Cch------------------------h-hhhhc---hhhcCEEECcCCcccc-cccc---ccccceeECCCCccccC-C
Confidence 443 3 12221 2456677777777763 4432 35677788888877753 3
Q ss_pred ccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCC
Q 002186 287 WEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSK 366 (955)
Q Consensus 287 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~ 366 (955)
.. ..+|+.|++++|++++ +|.. ..+|+.|++++|++++ +|.. .++|+.|++++|++++ +|... .+
T Consensus 319 ~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l~---~~ 383 (788)
T PRK15387 319 AL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPALP---SG 383 (788)
T ss_pred CC---cccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Ccccc---cc
Confidence 22 2356677777777764 4431 1356677777777663 3432 2345556666666653 44321 34
Q ss_pred CCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCC
Q 002186 367 LRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSR 446 (955)
Q Consensus 367 L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 446 (955)
|+.|++++|.++ + +|.. .++|+.|++++|++++ +|.. ..+|+.|++++
T Consensus 384 L~~LdLs~N~Lt------------------------~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~ 431 (788)
T PRK15387 384 LKELIVSGNRLT------------------------S-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYR 431 (788)
T ss_pred cceEEecCCccc------------------------C-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhcc
Confidence 555555555554 2 2221 2579999999999985 6653 34688999999
Q ss_pred CcCCCCCCcchhhccCCcccccCCCCCCCCCCCccc
Q 002186 447 NGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQT 482 (955)
Q Consensus 447 N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~ 482 (955)
|+++ .+|..+..+++|++|++++| .+.+..+..+
T Consensus 432 NqLt-~LP~sl~~L~~L~~LdLs~N-~Ls~~~~~~L 465 (788)
T PRK15387 432 NQLT-RLPESLIHLSSETTVNLEGN-PLSERTLQAL 465 (788)
T ss_pred Cccc-ccChHHhhccCCCeEECCCC-CCCchHHHHH
Confidence 9998 78999999999999999999 6666665544
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-20 Score=223.75 Aligned_cols=224 Identities=24% Similarity=0.405 Sum_probs=123.5
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
...+.|+++++.++ .+|..+. ++|+.|+|++|+++. +|..+. ++|++|++++|+++ .+|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 34667777777776 3555443 467777777777773 454443 46777777777776 3555443 36777777
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~ 260 (955)
++|.+. .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|.++.
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~- 318 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA- 318 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-
Confidence 777776 4565543 46777777777776 3555443 356666666666553 333222 345556666666553
Q ss_pred CCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCC
Q 002186 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (955)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 340 (955)
+|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|+++. +|..+.
T Consensus 319 LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~-LP~~lp--~~L~~LdLs~N~Lt~-LP~~l~-- 387 (754)
T PRK15370 319 LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITV-LPETLP--PTITTLDVSRNALTN-LPENLP-- 387 (754)
T ss_pred CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCCc-CChhhc--CCcCEEECCCCcCCC-CCHhHH--
Confidence 333321 355555555555553 333332 355555555555542 343332 345555555555552 333322
Q ss_pred CCccEEEccCCcCc
Q 002186 341 PSLEILFIWNNYFS 354 (955)
Q Consensus 341 ~~L~~L~L~~N~l~ 354 (955)
.+|+.|++++|+++
T Consensus 388 ~sL~~LdLs~N~L~ 401 (754)
T PRK15370 388 AALQIMQASRNNLV 401 (754)
T ss_pred HHHHHHhhccCCcc
Confidence 23555555555554
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-20 Score=204.47 Aligned_cols=138 Identities=18% Similarity=0.165 Sum_probs=111.0
Q ss_pred hhhcccchhhhccCCCCCceEEEeCC--CCcEEEEEEeecc------cchHHHHHHHHHHHhccCCCCceeEeEEEEcCC
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVLP--TGITVSVKKIEWG------ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH 759 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~~--~g~~vAvK~~~~~------~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 759 (955)
...|. ..+.||+|+||+||+|... +|+.||||++... ....+.+.+|++++++++|+|||+.+.. .+
T Consensus 17 ~~~Y~--~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~ 91 (365)
T PRK09188 17 SARFV--ETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG 91 (365)
T ss_pred cCCce--EccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence 34466 8889999999999999853 6888899987532 1124568999999999999999963322 24
Q ss_pred eeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC-CCCCeeeCCCCCceECccccccccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL-KASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdl-k~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
..|+||||+++++|... .. . ....++.++++||+|+|+. +|+|||| ||+|||++.++.+||+|||+++...
T Consensus 92 ~~~LVmE~~~G~~L~~~-~~-~---~~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~ 163 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-RP-H---GDPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFR 163 (365)
T ss_pred CcEEEEEccCCCCHHHh-Cc-c---chHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccceecc
Confidence 67999999999999732 21 1 1246788999999999998 9999999 9999999999999999999988654
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.4e-20 Score=203.00 Aligned_cols=208 Identities=21% Similarity=0.333 Sum_probs=154.6
Q ss_pred HhccCCCCceeEeEEEEcCCeeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCc-ccCCCCC
Q 002186 740 IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAI-PHGDLKA 815 (955)
Q Consensus 740 l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~i-iHrdlk~ 815 (955)
|+.+.|.|+.+++|.|.+....+.|.+||+.|+|.|.+.. +++|.-+..+++++++||+|+|+. +| .|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeecc
Confidence 3568899999999999999999999999999999999986 568999999999999999999987 55 8999999
Q ss_pred CCeeeCCCCCceECcccccccccccC----CCC-cccccccCchhhhhcc-------CCcccccchhHHHHHHHHHhCCC
Q 002186 816 SNIVFDENMEPHLAEFGFKYLTQLAD----GSF-PAKIAWTESGEFYNAM-------KEEMYMDVYGFGEIILEILTNGR 883 (955)
Q Consensus 816 ~NiLl~~~~~~ki~DfGl~~~~~~~~----~~~-~~~~~~~~~~e~~~~~-------~~~~~~DV~S~Gvvl~Elltg~~ 883 (955)
+|+++|..+.+|++|||+........ ... ....- +.+||..... ..+.+.||||||++++|+++++.
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~l-w~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALL-WTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHh-ccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 99999999999999999976653211 111 11222 4566665542 14566899999999999999999
Q ss_pred CCCCCCCCCCcccccccccccc-ccccCCCCch--HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 884 LTNAGSSLQNKPIDGLLGEMYN-ENEVGSSSSL--QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 884 p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
||......... .+.+..+.+ ......+... .+...++..++..||..+|++||++++|-..++.+..+
T Consensus 157 ~~~~~~~~~~~--~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 157 PFDLRNLVEDP--DEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred ccccccccCCh--HHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 99843322211 111111111 1111111111 13334688999999999999999999999888877654
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.4e-20 Score=216.97 Aligned_cols=207 Identities=22% Similarity=0.419 Sum_probs=115.5
Q ss_pred CCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEc
Q 002186 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 204 (955)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 204 (955)
.+...|+++++.++. +|..+. ++|+.|+|++|+++ .+|..+. .+|++|+|++|.++ .+|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 456778888887773 565443 46788888888877 4565554 47788888888777 4565443 36777777
Q ss_pred cCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccccccc
Q 002186 205 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQ 284 (955)
Q Consensus 205 ~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 284 (955)
++|.+. .+|..+. ++|+.|+++.|.+. .+|..+. .+|++|++++|++++ +|..
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~-------------------- 301 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAH-------------------- 301 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Cccc--------------------
Confidence 777776 4555443 34555555555554 2343322 244444554444442 2222
Q ss_pred CCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCC
Q 002186 285 VPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN 364 (955)
Q Consensus 285 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~ 364 (955)
+. ++|+.|++++|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+++ .+|..+.
T Consensus 302 ----lp--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp-- 366 (754)
T PRK15370 302 ----LP--SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP-- 366 (754)
T ss_pred ----ch--hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--
Confidence 21 245555555555553 233221 355555566555553 444332 45666666666665 3444332
Q ss_pred CCCCeeecCCCcccccCCC
Q 002186 365 SKLRWVDVSTNNFNGSIPP 383 (955)
Q Consensus 365 ~~L~~L~ls~N~l~g~ip~ 383 (955)
++|+.|++++|.++ .+|+
T Consensus 367 ~~L~~LdLs~N~Lt-~LP~ 384 (754)
T PRK15370 367 PTITTLDVSRNALT-NLPE 384 (754)
T ss_pred CCcCEEECCCCcCC-CCCH
Confidence 35666666666665 3444
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-19 Score=181.49 Aligned_cols=134 Identities=9% Similarity=0.067 Sum_probs=105.2
Q ss_pred hhccCCCCCceEEEeCCCCcEEEEEEeecccch---------------------------HHHHHHHHHHHhccCCCCce
Q 002186 697 EEAARPQSAAGCKAVLPTGITVSVKKIEWGATR---------------------------IKIVSEFITRIGTVRHKNLI 749 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~---------------------------~~~~~~e~~~l~~l~H~niv 749 (955)
..||+|++|.||+|..++|+.||||+++.+... ......|++.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 578999999999999889999999999753211 01223588999999888775
Q ss_pred eEeEEEEcCCeeEEEEeecCCCChhHHh-h-cCCCHHHHHHHHHHHHHHHHHH-hcCCCCCcccCCCCCCCeeeCCCCCc
Q 002186 750 RLLGFCYNRHQAYLLYDYLPNGNLSEKI-R-TKRDWAAKYKIVLGVARGLCFL-HHDCYPAIPHGDLKASNIVFDENMEP 826 (955)
Q Consensus 750 ~l~g~~~~~~~~~lv~ey~~~gsL~~~l-~-~~~~~~~~~~i~~~ia~gl~~l-H~~~~~~iiHrdlk~~NiLl~~~~~~ 826 (955)
....+... ..+|||||++++++.... . ...+..+...++.|++.+|+|+ |+. +|+||||||+||+++ ++.+
T Consensus 83 ~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~-~~~v 156 (190)
T cd05147 83 CPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH-DGKL 156 (190)
T ss_pred CCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-CCcE
Confidence 43333222 238999999988776543 2 2557777889999999999999 566 999999999999998 4789
Q ss_pred eECccccccc
Q 002186 827 HLAEFGFKYL 836 (955)
Q Consensus 827 ki~DfGl~~~ 836 (955)
+++|||++..
T Consensus 157 ~LiDFG~a~~ 166 (190)
T cd05147 157 YIIDVSQSVE 166 (190)
T ss_pred EEEEcccccc
Confidence 9999999864
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.3e-19 Score=177.63 Aligned_cols=136 Identities=11% Similarity=0.113 Sum_probs=108.0
Q ss_pred hhccCCCCCceEEEeCCCCcEEEEEEeecccch---------------------------HHHHHHHHHHHhccCCCCce
Q 002186 697 EEAARPQSAAGCKAVLPTGITVSVKKIEWGATR---------------------------IKIVSEFITRIGTVRHKNLI 749 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~---------------------------~~~~~~e~~~l~~l~H~niv 749 (955)
..||+|++|.||+|...+|+.||||+++..... ......|.+.+.+++|++|.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999889999999998753210 11235788999999999986
Q ss_pred eEeEEEEcCCeeEEEEeecCCCChhHH-hhc-CCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeeeCCCCCc
Q 002186 750 RLLGFCYNRHQAYLLYDYLPNGNLSEK-IRT-KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEP 826 (955)
Q Consensus 750 ~l~g~~~~~~~~~lv~ey~~~gsL~~~-l~~-~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl~~~~~~ 826 (955)
....+... ..++||||++++++... +.. ..+..+...++.|++.++.|+|+ . +|+||||||+||+++ ++.+
T Consensus 83 ~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~-~~~~ 156 (190)
T cd05145 83 VPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH-DGKP 156 (190)
T ss_pred CceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-CCCE
Confidence 55544433 24899999998865433 332 44566778999999999999999 7 999999999999999 8899
Q ss_pred eECccccccccc
Q 002186 827 HLAEFGFKYLTQ 838 (955)
Q Consensus 827 ki~DfGl~~~~~ 838 (955)
+++|||+++...
T Consensus 157 ~liDFG~a~~~~ 168 (190)
T cd05145 157 YIIDVSQAVELD 168 (190)
T ss_pred EEEEcccceecC
Confidence 999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.8e-19 Score=180.44 Aligned_cols=165 Identities=13% Similarity=0.104 Sum_probs=125.7
Q ss_pred chhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHH----------HHHHHHHHHhccCCCCceeEeEEEEcC-----
Q 002186 694 TECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIK----------IVSEFITRIGTVRHKNLIRLLGFCYNR----- 758 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~----------~~~~e~~~l~~l~H~niv~l~g~~~~~----- 758 (955)
...+.+|.|+||.||.+.. ++..+|||.+.......+ .+++|++.+++++||+|..+..++...
T Consensus 34 ~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~ 112 (232)
T PRK10359 34 KTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTL 112 (232)
T ss_pred EEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccc
Confidence 3888999999999999766 677899999965322211 257899999999999999998886532
Q ss_pred ---CeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 759 ---HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 759 ---~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
+..+|||||++|.+|.++.. .+ .....+++.++..+|+. +++|||+||+||+++.++ ++++|||..+
T Consensus 113 ~~~~~~~lvmEyi~G~tL~~~~~--~~----~~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i~liDfg~~~ 182 (232)
T PRK10359 113 RYAHTYIMLIEYIEGVELNDMPE--IS----EDVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-LRIIDLSGKR 182 (232)
T ss_pred cccCCeEEEEEEECCccHHHhhh--cc----HHHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-EEEEECCCcc
Confidence 35799999999999988732 11 13456899999999999 999999999999999888 9999999875
Q ss_pred cccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHH
Q 002186 836 LTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEIL 879 (955)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ell 879 (955)
...... +...+.....+..++|+|||||.+.-..
T Consensus 183 ~~~e~~----------a~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 183 CTAQRK----------AKDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred cccchh----------hHHHHHHHhHhcccccccceeEeehHHH
Confidence 432111 1112333334557899999999876543
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-17 Score=185.06 Aligned_cols=245 Identities=18% Similarity=0.184 Sum_probs=181.8
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCC-CceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHK-NLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~-niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
....+|.|+||.||++... ..+|+|.+..... ....+.+|+..++.+.|+ +|+++.+++......++++||+.
T Consensus 4 ~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (384)
T COG0515 4 ILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVD 81 (384)
T ss_pred eEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCC
Confidence 5567899999999999987 7899999976432 256788999999999988 79999999987777899999999
Q ss_pred CCChhHHhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-CceECcccccccccccCC-
Q 002186 770 NGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 770 ~gsL~~~l~~-----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~-~~ki~DfGl~~~~~~~~~- 842 (955)
++++.+++.. .........++.|++.++.|+|.. +++|||+||+||+++... .+|++|||.++.......
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 82 GGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9999987775 356677789999999999999999 899999999999999988 799999999875433221
Q ss_pred -------CCcccccccCchhhhhc---cCCcccccchhHHHHHHHHHhCCCCCCCCCCC--CCccccccccccccc-ccc
Q 002186 843 -------SFPAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSL--QNKPIDGLLGEMYNE-NEV 909 (955)
Q Consensus 843 -------~~~~~~~~~~~~e~~~~---~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~--~~~~~~~~~~~~~~~-~~~ 909 (955)
....+..++.+||.... .......|+||+|++++++++|..|+...... .... ...+.....+ ...
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 237 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQT-LKIILELPTPSLAS 237 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHH-HHHHHhcCCccccc
Confidence 12235556778887776 57788899999999999999999996533321 0000 0011111100 000
Q ss_pred CCCCch-HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 910 GSSSSL-QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 910 ~~~~~~-~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...... ......+.+++..|+..+|..|.++.+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 000000 112245667888899999999999887665
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.4e-19 Score=209.36 Aligned_cols=246 Identities=15% Similarity=0.071 Sum_probs=171.6
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEee----cccch---HHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIE----WGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~----~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
....+|.|++|.|+.... ......+.|... ..... ...+..|.-+-.+++|||++..+..+++....+-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 456789999997776653 233334444332 11111 1125566666678999999988888777666666699
Q ss_pred ecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 767 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 767 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
||++ ||...+.. .....++..++.|+..|+.|+|.. +|.|||+|++|+++..++.+||+|||.+....-....
T Consensus 402 ~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~ 477 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN 477 (601)
T ss_pred cccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence 9999 99999987 467777888999999999999999 9999999999999999999999999988665433221
Q ss_pred --C---cccccccCchhhhhccCCccc-ccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 844 --F---PAKIAWTESGEFYNAMKEEMY-MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 844 --~---~~~~~~~~~~e~~~~~~~~~~-~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
. ..+-..|.+||......+.+. .||||.|||+..|++|+.||.................... ...+.......
T Consensus 478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 556 (601)
T KOG0590|consen 478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRN-IFEGPNRLLSL 556 (601)
T ss_pred hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccc-cccChHHHHHh
Confidence 1 112233566888877766554 7999999999999999999874322111100000000000 00111112245
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...+...++.++++.||.+|-||++|++
T Consensus 557 lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 557 LPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred chhhHHHHHHHHccCChhheecHHHHhh
Confidence 5667888999999999999999999986
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-17 Score=164.62 Aligned_cols=180 Identities=13% Similarity=0.034 Sum_probs=129.4
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccch-----HHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR-----IKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~-----~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
....+++|+||+||.+.. .|..++.+.++....- ...+.+|+++|+++. |++|.+++++ +..++||||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 567899999999997776 6778887877654331 225789999999995 5889999886 3469999999
Q ss_pred CCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC-CCCCeeeCCCCCceECcccccccccccCCC----
Q 002186 769 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL-KASNIVFDENMEPHLAEFGFKYLTQLADGS---- 843 (955)
Q Consensus 769 ~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdl-k~~NiLl~~~~~~ki~DfGl~~~~~~~~~~---- 843 (955)
+|.+|.+.+.. ....++.|++++++++|+. +|+|||| ||+|||++.++.++|+|||++.........
T Consensus 81 ~G~~L~~~~~~-----~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L 152 (218)
T PRK12274 81 AGAAMYQRPPR-----GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLL 152 (218)
T ss_pred cCccHHhhhhh-----hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHH
Confidence 99998765432 1245778999999999999 9999999 799999999999999999998744322110
Q ss_pred C-c------ccccccCc----h-hhhhccCCc-ccccchhHHHHHHHHHhCCCCCCC
Q 002186 844 F-P------AKIAWTES----G-EFYNAMKEE-MYMDVYGFGEIILEILTNGRLTNA 887 (955)
Q Consensus 844 ~-~------~~~~~~~~----~-e~~~~~~~~-~~~DV~S~Gvvl~Elltg~~p~~~ 887 (955)
. . .....|.+ | |...-...+ ...+.++-|.-+|.++||+-+...
T Consensus 153 ~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 153 AREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 0 00000111 1 111111111 234788999999999999988763
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.74 E-value=9e-20 Score=202.01 Aligned_cols=208 Identities=24% Similarity=0.266 Sum_probs=90.2
Q ss_pred hcCCCcceEEEecCCCCcccCCCCcCCCCC---CcEEEccCCCCCC----CCchhccCC-CCCcEEecccccccCC----
Q 002186 169 ISQLEHLKVLNLAGSYFSGPIPSQFGSFKS---LEFLHLAGNLLND----QIPAELGML-KTVTHMEIGYNFYQGN---- 236 (955)
Q Consensus 169 ~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~l~~l-~~L~~L~l~~n~l~g~---- 236 (955)
+.++++|++|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++.
T Consensus 77 l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 156 (319)
T cd00116 77 LTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEA 156 (319)
T ss_pred HHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHH
Confidence 334444444444444444333333322222 4444444444432 112222333 4444444444444321
Q ss_pred CCccccCCCCCcEEeccCCCCCCC----CCccccCCCCCCEEEeccccccccC----CccCcCCCccCEEEccCCCCCCC
Q 002186 237 IPWQLGNMSEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLAGQV----PWEFSRVTTLKSLDLSDNRLSGP 308 (955)
Q Consensus 237 ~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~ 308 (955)
++..+..+.+|++|++++|.+++. ++..+..+++|++|++++|.+++.. +..+..+++|++|++++|.+++.
T Consensus 157 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~ 236 (319)
T cd00116 157 LAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDA 236 (319)
T ss_pred HHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchH
Confidence 122233444555555555555431 2222333445555555555554221 22234455566666666655532
Q ss_pred CCcccC-----CCCCCcEEecccccCCC----CCccccCCCCCccEEEccCCcCccc----CCcccCCC-CCCCeeecCC
Q 002186 309 IPESFA-----DLKNLRLLSLMYNEMSG----TVPESLVQLPSLEILFIWNNYFSGS----LPENLGRN-SKLRWVDVST 374 (955)
Q Consensus 309 ~p~~~~-----~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~~-~~L~~L~ls~ 374 (955)
....+. ..+.|+.|++++|.++. .+...+..+++|+++++++|.++.. +...+... +.++.+++.+
T Consensus 237 ~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (319)
T cd00116 237 GAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKD 316 (319)
T ss_pred HHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCC
Confidence 111111 12456666666665541 1223334445566666666665532 22222222 4555555555
Q ss_pred Cc
Q 002186 375 NN 376 (955)
Q Consensus 375 N~ 376 (955)
|.
T Consensus 317 ~~ 318 (319)
T cd00116 317 DS 318 (319)
T ss_pred CC
Confidence 43
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-17 Score=169.91 Aligned_cols=135 Identities=15% Similarity=0.164 Sum_probs=105.3
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecc-cchHHHHHHHHHHHhcc-----CCCCceeEeEEEEcCC---eeE-EE
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWG-ATRIKIVSEFITRIGTV-----RHKNLIRLLGFCYNRH---QAY-LL 764 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~-~~~~~~~~~e~~~l~~l-----~H~niv~l~g~~~~~~---~~~-lv 764 (955)
..+.||+|++|.||+ .-.++.. +||++... ....+.+.+|++.++++ .||||++++|+++++. ..+ +|
T Consensus 6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred CcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 567899999999996 2234444 69988653 22456789999999999 5799999999998863 434 78
Q ss_pred Eee--cCCCChhHHhhcCCCHHHHHHHHHHHHHHH-HHHhcCCCCCcccCCCCCCCeeeCC----CCCceECc-ccccc
Q 002186 765 YDY--LPNGNLSEKIRTKRDWAAKYKIVLGVARGL-CFLHHDCYPAIPHGDLKASNIVFDE----NMEPHLAE-FGFKY 835 (955)
Q Consensus 765 ~ey--~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl-~~lH~~~~~~iiHrdlk~~NiLl~~----~~~~ki~D-fGl~~ 835 (955)
+|| +++|+|.+++.+.. ..+...++.++..++ +|||+. +|+||||||+|||++. +..++|+| ||...
T Consensus 84 ~e~~G~~~~tL~~~l~~~~-~~e~~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~ 158 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQCR-YEEDVAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNIGEST 158 (210)
T ss_pred ecCCCCcchhHHHHHHccc-ccHhHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECCCCcc
Confidence 999 66899999997632 222245678888888 999999 9999999999999974 34799999 55443
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1e-16 Score=176.77 Aligned_cols=246 Identities=13% Similarity=0.064 Sum_probs=170.2
Q ss_pred hhhhccCCCCCceEEEeCCCC--cEEEEEEeecccc-hHHHHHHHHHHHhccCC----CCceeEeEEE-EcCCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVLPTG--ITVSVKKIEWGAT-RIKIVSEFITRIGTVRH----KNLIRLLGFC-YNRHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g--~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H----~niv~l~g~~-~~~~~~~lv~e 766 (955)
....||+|+||.||.|..... ..+|+|.-..... ....+..|+.++..+.+ +++.++++.. ..++..|+||+
T Consensus 22 i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~ 101 (322)
T KOG1164|consen 22 LGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMS 101 (322)
T ss_pred EeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEe
Confidence 888999999999999996543 4788887654322 12256777888877763 5888888888 47778999999
Q ss_pred ecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC-----CCceECcccccccc
Q 002186 767 YLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-----MEPHLAEFGFKYLT 837 (955)
Q Consensus 767 y~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~-----~~~ki~DfGl~~~~ 837 (955)
.+ |.+|.++... ..+..+..+|+.|+..+|+++|+. +++||||||+|++++.. ..+.+.|||+++..
T Consensus 102 l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~ 177 (322)
T KOG1164|consen 102 LL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF 177 (322)
T ss_pred cc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence 88 6799997743 457788899999999999999999 99999999999999865 46899999999822
Q ss_pred c--ccCC-------C---CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccc
Q 002186 838 Q--LADG-------S---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 838 ~--~~~~-------~---~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
. ...+ . ...++..|++.....+...+.+.|+||++-++.|+..|..|+........ .....+...
T Consensus 178 ~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~---~~~~~~~~~ 254 (322)
T KOG1164|consen 178 KYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL---KSKFEKDPR 254 (322)
T ss_pred cccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch---HHHHHHHhh
Confidence 1 1111 0 01134446666777777888899999999999999999988753332111 000000000
Q ss_pred ccccC-CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 906 ENEVG-SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 906 ~~~~~-~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
..... .....+. .+.++...+-..+..++|....+.+.++..
T Consensus 255 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 255 KLLTDRFGDLKPE---EFAKILEYIDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred hhccccccCCChH---HHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence 00000 0111122 233333344457899999999988877543
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.9e-19 Score=195.47 Aligned_cols=254 Identities=22% Similarity=0.249 Sum_probs=191.6
Q ss_pred CCCCcEEECCCCcCccc----CCccccCCCCCCEEEccCCcCCc------cCCccccCCCCCcEEeCCCCCCCCCCchhh
Q 002186 100 FNELVDLNLSHNSFSGQ----FPVEIFNLTSLISLDISRNNFSG------HFPGGIQSLRNLLVLDAFSNSFSGSVPAEI 169 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~ 169 (955)
+..|+.|+++++.++.. ++..+...++|++|+++++.+.+ .++..+..+++|+.|++++|.+.+..+..+
T Consensus 22 l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~ 101 (319)
T cd00116 22 LLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVL 101 (319)
T ss_pred HhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHH
Confidence 56689999999988542 56667788889999999988762 234567778899999999999987777777
Q ss_pred cCCCc---ceEEEecCCCCcc----cCCCCcCCC-CCCcEEEccCCCCCCC----CchhccCCCCCcEEecccccccCC-
Q 002186 170 SQLEH---LKVLNLAGSYFSG----PIPSQFGSF-KSLEFLHLAGNLLNDQ----IPAELGMLKTVTHMEIGYNFYQGN- 236 (955)
Q Consensus 170 ~~L~~---L~~L~Ls~n~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~l~~n~l~g~- 236 (955)
..+.+ |++|++++|.+++ .+...+..+ ++|+.|++++|.+++. ++..+..+++|++|++++|.+.+.
T Consensus 102 ~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 181 (319)
T cd00116 102 ESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAG 181 (319)
T ss_pred HHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHH
Confidence 66666 9999999998873 333456667 8999999999998843 344567778999999999988742
Q ss_pred ---CCccccCCCCCcEEeccCCCCCCC----CCccccCCCCCCEEEeccccccccCCccCc-----CCCccCEEEccCCC
Q 002186 237 ---IPWQLGNMSEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLAGQVPWEFS-----RVTTLKSLDLSDNR 304 (955)
Q Consensus 237 ---~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~ 304 (955)
++..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++.....+. ..+.|++|++++|.
T Consensus 182 ~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~ 261 (319)
T cd00116 182 IRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCND 261 (319)
T ss_pred HHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCC
Confidence 334455667999999999988743 334566788999999999998753222221 24789999999999
Q ss_pred CCC----CCCcccCCCCCCcEEecccccCCCC----CccccCCC-CCccEEEccCCcC
Q 002186 305 LSG----PIPESFADLKNLRLLSLMYNEMSGT----VPESLVQL-PSLEILFIWNNYF 353 (955)
Q Consensus 305 l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l-~~L~~L~L~~N~l 353 (955)
++. .+...+..+++|+++++++|.++.. +...+... +.|+.+++.+|.+
T Consensus 262 i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 262 ITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 872 2344566778999999999999854 33444444 7889999888754
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2e-19 Score=165.25 Aligned_cols=157 Identities=32% Similarity=0.585 Sum_probs=101.5
Q ss_pred ccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCc
Q 002186 121 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLE 200 (955)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 200 (955)
+.++++.+.|-||+|+++ .+|..+..|.+|++|++++|++. .+|.+++.+++|+.|+++-|++. ..|..||.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 345566666667777766 45556777777777777777776 57777777888888888877776 6777888888888
Q ss_pred EEEccCCCCCC-CCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccc
Q 002186 201 FLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279 (955)
Q Consensus 201 ~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N 279 (955)
+|||.+|++.. .+|..|..++.|+.|+++.|.|. .+|..++++++|+.|.+..|.+- .+|.+++.++.|++|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 88888777753 45555555555555555555554 34555555555555555555554 35555555555555555555
Q ss_pred ccc
Q 002186 280 QLA 282 (955)
Q Consensus 280 ~l~ 282 (955)
.++
T Consensus 184 rl~ 186 (264)
T KOG0617|consen 184 RLT 186 (264)
T ss_pred eee
Confidence 554
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1e-18 Score=160.67 Aligned_cols=163 Identities=28% Similarity=0.486 Sum_probs=144.0
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+.+++.|.||+|.++ .+|+.+..|.+|+.|++++|++. ..|.++.+++.|++|+++-|++. ..|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 467888999999998 67778999999999999999997 67889999999999999999987 7899999999999999
Q ss_pred ecCCCCcc-cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCC
Q 002186 180 LAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (955)
Q Consensus 180 Ls~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~ 258 (955)
|++|++.. .+|..|..++.|+.|+|+.|.+. .+|..+++|++|+.|.+..|.+. .+|..++.++.|+.|.+.+|.++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 99998864 57888999999999999999985 78999999999999999998876 68999999999999999999998
Q ss_pred CCCCccccCC
Q 002186 259 GSIPKELSNL 268 (955)
Q Consensus 259 ~~~p~~l~~l 268 (955)
.+|++++++
T Consensus 187 -vlppel~~l 195 (264)
T KOG0617|consen 187 -VLPPELANL 195 (264)
T ss_pred -ecChhhhhh
Confidence 567776654
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.6e-16 Score=162.95 Aligned_cols=133 Identities=17% Similarity=0.187 Sum_probs=113.3
Q ss_pred hhccCCCCCceEEEeCCCCcEEEEEEeecccc---------hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 697 EEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
+.||+|++|.||+|.. +|..|+||+...... ....+.+|++.+..++|++|.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4689999999999987 777899998653211 124567899999999999998888888777888999999
Q ss_pred cCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 768 LPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 768 ~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
+++++|.+++..... ++..++.+++.+++++|+. +++|||++|.||+++ ++.++++|||.++.
T Consensus 81 ~~G~~L~~~~~~~~~--~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNGM--EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhccH--HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999875432 7789999999999999998 999999999999999 78899999998753
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.1e-16 Score=160.22 Aligned_cols=132 Identities=14% Similarity=0.152 Sum_probs=105.5
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccch-----------------------HHHHHHHHHHHhccCCCC--ce
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR-----------------------IKIVSEFITRIGTVRHKN--LI 749 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~-----------------------~~~~~~e~~~l~~l~H~n--iv 749 (955)
..+.||+|+||.||+|..++|+.||||++..+... ......|+..+.++.|++ +.
T Consensus 19 ~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~ 98 (198)
T cd05144 19 LGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVP 98 (198)
T ss_pred cCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCC
Confidence 56789999999999999989999999987642210 123567888888888874 44
Q ss_pred eEeEEEEcCCeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 750 RLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 750 ~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
+.++. +..++||||+++++|.+.... .....++.++++++.++|+. +|+||||||+||++++++.++|+
T Consensus 99 ~~~~~----~~~~lv~e~~~g~~L~~~~~~----~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~~~~~~li 167 (198)
T cd05144 99 KPIDW----NRHAVVMEYIDGVELYRVRVL----EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDDDEKIYII 167 (198)
T ss_pred ceeec----CCceEEEEEeCCcchhhcccc----ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcCCCcEEEE
Confidence 44442 345899999999999776431 23457889999999999998 99999999999999999999999
Q ss_pred cccccccc
Q 002186 830 EFGFKYLT 837 (955)
Q Consensus 830 DfGl~~~~ 837 (955)
|||++...
T Consensus 168 Dfg~~~~~ 175 (198)
T cd05144 168 DWPQMVST 175 (198)
T ss_pred ECCccccC
Confidence 99998543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.4e-16 Score=153.11 Aligned_cols=191 Identities=10% Similarity=0.041 Sum_probs=141.0
Q ss_pred cchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccCC-CCceeEeEEEEcCCeeEEEEeecCC
Q 002186 693 STECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRH-KNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 693 ~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
+.....||.|+||.+|.|. ..+|..||||.=+... ......-|.++...++| .-|-.+..|..+.+.-.+|||.. |
T Consensus 17 y~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-G 94 (341)
T KOG1163|consen 17 YKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-G 94 (341)
T ss_pred eEEEEeecCCchhheeeeeeccCCceEEEEeecccC-CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-C
Confidence 3378899999999999998 6789999999855332 23344456677766765 34555666777788889999988 6
Q ss_pred CChhHHhh---cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC---CCceECcccccccccccCCC-
Q 002186 771 GNLSEKIR---TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 771 gsL~~~l~---~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~DfGl~~~~~~~~~~- 843 (955)
.||++... +..+..+.+-++-|+..-++|+|.+ +.|||||||.|.|..-. ..+.++|||+|+...+....
T Consensus 95 PsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~ 171 (341)
T KOG1163|consen 95 PSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQ 171 (341)
T ss_pred ccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhccccccc
Confidence 79988764 3556667788899999999999999 89999999999999743 45789999999865443221
Q ss_pred --------CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCC
Q 002186 844 --------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 888 (955)
Q Consensus 844 --------~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~ 888 (955)
.-++++.|++-....+...+.+-|+=|+|-|+...--|.-||.+-
T Consensus 172 HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl 224 (341)
T KOG1163|consen 172 HIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL 224 (341)
T ss_pred cCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence 112334344333333344566679999999998888899998743
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.1e-16 Score=161.91 Aligned_cols=136 Identities=11% Similarity=0.121 Sum_probs=105.5
Q ss_pred chhhhccCCCCCceEEEe--CCCCcEEEEEEeecccc-------------------------hHHHHHHHHHHHhccCCC
Q 002186 694 TECEEAARPQSAAGCKAV--LPTGITVSVKKIEWGAT-------------------------RIKIVSEFITRIGTVRHK 746 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~--~~~g~~vAvK~~~~~~~-------------------------~~~~~~~e~~~l~~l~H~ 746 (955)
...+.||+|++|.||+|+ ..+|+.||||+++.... ....+..|++.+.++.|.
T Consensus 31 ~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~ 110 (237)
T smart00090 31 AIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEA 110 (237)
T ss_pred HhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 467789999999999998 67999999999874321 012356789999998763
Q ss_pred C--ceeEeEEEEcCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCC-cccCCCCCCCeeeC
Q 002186 747 N--LIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPA-IPHGDLKASNIVFD 821 (955)
Q Consensus 747 n--iv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~-iiHrdlk~~NiLl~ 821 (955)
. +.+.+++ ...++||||++++++...... .....+...++.|++.+++|+|+. + |+|||+||+||+++
T Consensus 111 ~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NIli~ 183 (237)
T smart00090 111 GVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNILVH 183 (237)
T ss_pred CCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhEEEE
Confidence 3 3344443 235899999999888765532 223334568999999999999999 8 99999999999999
Q ss_pred CCCCceECcccccccc
Q 002186 822 ENMEPHLAEFGFKYLT 837 (955)
Q Consensus 822 ~~~~~ki~DfGl~~~~ 837 (955)
++.++++|||.+...
T Consensus 184 -~~~i~LiDFg~a~~~ 198 (237)
T smart00090 184 -DGKVVIIDVSQSVEL 198 (237)
T ss_pred -CCCEEEEEChhhhcc
Confidence 889999999987643
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.64 E-value=5e-16 Score=159.12 Aligned_cols=129 Identities=19% Similarity=0.240 Sum_probs=106.8
Q ss_pred hccCCCCCceEEEeCCCCcEEEEEEeeccc---------chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 698 EAARPQSAAGCKAVLPTGITVSVKKIEWGA---------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
.||+|++|.||+|.. +|..|+||+..... ...+.+.+|++.+.+++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 479999999999984 67889999864321 11345678999999999988766666666677789999999
Q ss_pred CCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 769 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 769 ~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
++++|.+++..... .++.+++++++++|+. +++|||+||.||+++ ++.+++.|||.++.
T Consensus 80 ~g~~l~~~~~~~~~-----~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND-----ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH-----HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999988754221 7899999999999998 999999999999999 78999999998754
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-16 Score=184.92 Aligned_cols=240 Identities=21% Similarity=0.224 Sum_probs=164.0
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeeccc--chHHHH---HHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA--TRIKIV---SEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~--~~~~~~---~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.+|++.|=+|.||+.+.|. |.||++-+.. ...+.+ .+|++ ...++|||.+++.-+-..+...|||=+|+.
T Consensus 27 ~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvk 104 (1431)
T KOG1240|consen 27 YVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVK 104 (1431)
T ss_pred eecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHh
Confidence 5678999999999999999997 8889885432 233333 34444 456789999999888777778899999996
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---C--
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---G-- 842 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~---~-- 842 (955)
+ +|+|.|.. -+...+.+-|+.|+..|+.-+|.. +|.|+|||.+|||+..=..+.++||.--+...... .
T Consensus 105 h-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf 180 (1431)
T KOG1240|consen 105 H-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADF 180 (1431)
T ss_pred h-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCCCcccc
Confidence 5 89998865 235566778999999999999999 99999999999999998899999998644321111 0
Q ss_pred -----CCcccccccCchhhhhc----------cCCcccccchhHHHHHHHHHhCCCCCCC-CCCCCCccccccccccccc
Q 002186 843 -----SFPAKIAWTESGEFYNA----------MKEEMYMDVYGFGEIILEILTNGRLTNA-GSSLQNKPIDGLLGEMYNE 906 (955)
Q Consensus 843 -----~~~~~~~~~~~~e~~~~----------~~~~~~~DV~S~Gvvl~Elltg~~p~~~-~~~~~~~~~~~~~~~~~~~ 906 (955)
.....++|.+|+.++.. ...+++.||||.|||++|+++-++|.+. ++-. ..+.....++
T Consensus 181 ~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~-----aYr~~~~~~~ 255 (1431)
T KOG1240|consen 181 TFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLL-----AYRSGNADDP 255 (1431)
T ss_pred eEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHH-----hHhccCccCH
Confidence 01123454433323221 1256778999999999999986555431 1100 0000001111
Q ss_pred cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 907 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
... .+.. +...+.++++.+++.||++|-++++.++.-.+
T Consensus 256 e~~--Le~I--ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 256 EQL--LEKI--EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred HHH--HHhC--cCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 000 0000 01245678888999999999999999886443
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.2e-16 Score=160.92 Aligned_cols=224 Identities=16% Similarity=0.123 Sum_probs=136.6
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCC----------CCceeEeEEEE-c-
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRH----------KNLIRLLGFCY-N- 757 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H----------~niv~l~g~~~-~- 757 (955)
....||.|+++.||.++. .+|+.+|||+..... ...+.+.+|.-....+.+ -.++.-++... .
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 567899999999999996 579999999985422 224455555544444322 12222222211 1
Q ss_pred -------C---C-----eeEEEEeecCCCChhHHhhc---------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 002186 758 -------R---H-----QAYLLYDYLPNGNLSEKIRT---------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 813 (955)
Q Consensus 758 -------~---~-----~~~lv~ey~~~gsL~~~l~~---------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdl 813 (955)
. . ..+++|+-+ .+||.+++.. ......|..+..|+++.++++|+. +|+|+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-
T ss_pred CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEeccc
Confidence 1 1 236778877 4699887652 123455677889999999999999 9999999
Q ss_pred CCCCeeeCCCCCceECcccccccccccCCCCcccccccCchhhhhc--------cCCcccccchhHHHHHHHHHhCCCCC
Q 002186 814 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA--------MKEEMYMDVYGFGEIILEILTNGRLT 885 (955)
Q Consensus 814 k~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~--------~~~~~~~DV~S~Gvvl~Elltg~~p~ 885 (955)
||+|++++.+|.+.++||+........... ......++|||.... ..++.+.|.|++|+++|.|.+|+.|+
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf 250 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPF 250 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-ST
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCC
Confidence 999999999999999999875433221111 112233667775543 24678889999999999999999998
Q ss_pred CCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCC
Q 002186 886 NAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR 937 (955)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~R 937 (955)
........... . . .... +..+.+..++...++.+|.+|
T Consensus 251 ~~~~~~~~~~~----------~-f--~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 251 GLSSPEADPEW----------D-F--SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CCCGGGSTSGG----------G-G--TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCccccccc----------c-c--hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 73321110000 0 1 1111 344556678888999999988
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=7e-17 Score=178.73 Aligned_cols=182 Identities=16% Similarity=0.135 Sum_probs=144.0
Q ss_pred ccCCCCCceEEEe----CCCCcEEEEEEeecccch---HHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 699 AARPQSAAGCKAV----LPTGITVSVKKIEWGATR---IKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 699 ~g~g~~g~vy~~~----~~~g~~vAvK~~~~~~~~---~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
+|.|.||.|+.+. ...|.-+|+|..++.... ......|..+++.++ ||.+|++.-.++.+...+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6889999888544 235677888887653211 113445667777787 99999999999999999999999999
Q ss_pred CChhHHhhcCCCHHH--HHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCcccc
Q 002186 771 GNLSEKIRTKRDWAA--KYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKI 848 (955)
Q Consensus 771 gsL~~~l~~~~~~~~--~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~ 848 (955)
|++...+........ ...+...+|-|++++|.. +|+|||+|++||+++.+|.+|+.|||.++..-..... +++
T Consensus 82 g~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~--cgt 156 (612)
T KOG0603|consen 82 GDLFTRLSKEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA--CGT 156 (612)
T ss_pred chhhhccccCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc--ccc
Confidence 999999887554433 345566788899999999 9999999999999999999999999998765433222 445
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCC
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 887 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~ 887 (955)
..|++||+.. .....+|.|||||+++||+||..||..
T Consensus 157 ~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 157 YEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 5578888887 456678999999999999999999874
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.7e-16 Score=182.21 Aligned_cols=160 Identities=31% Similarity=0.447 Sum_probs=118.6
Q ss_pred CCChhhHHHHHHhhhhCCCCCCCCCCCCCCCCCCCCCCCCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCC
Q 002186 22 SANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFN 101 (955)
Q Consensus 22 ~~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~ 101 (955)
.+.++|.+||+++|+++.++.. .+|... +|. ..+|.|.||.|+..... + ..
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~--~~W~g~----~C~-p~~~~w~Gv~C~~~~~~------------~----------~~ 418 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLR--FGWNGD----PCV-PQQHPWSGADCQFDSTK------------G----------KW 418 (623)
T ss_pred ccCchHHHHHHHHHHhcCCccc--CCCCCC----CCC-CcccccccceeeccCCC------------C----------ce
Confidence 4567789999999999976532 479532 110 11248999999641110 0 01
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
.++.|+|++|.++|.+|..+..+++|++|+|++|.+.|.+|..++.+++|++|||++|+++|.+|..++++++|++|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 25667888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCCCcccCCCCcCCC-CCCcEEEccCCCCC
Q 002186 182 GSYFSGPIPSQFGSF-KSLEFLHLAGNLLN 210 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l-~~L~~L~L~~N~l~ 210 (955)
+|.++|.+|..++.+ .++..+++.+|...
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccc
Confidence 888888888877653 45667777777543
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.6e-16 Score=180.61 Aligned_cols=131 Identities=17% Similarity=0.204 Sum_probs=108.9
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEE-eecc-c-------chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKK-IEWG-A-------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~-~~~~-~-------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||+||+|...+.. +++|+ +... . ...+.+.+|++.+++++|++++....++.+++..++||
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 415 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVM 415 (535)
T ss_pred ccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEE
Confidence 5688999999999999875544 44443 2211 1 12345788999999999999999888888877889999
Q ss_pred eecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 766 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 766 ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
||+++++|.+++. .+..++.+++++++|+|+. +|+|||+||+||++ .++.++|+|||+++.
T Consensus 416 E~~~g~~L~~~l~------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 416 EYIGGKDLKDVLE------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EecCCCcHHHHHH------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 9999999999875 4577899999999999998 99999999999999 577899999999864
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.4e-15 Score=157.73 Aligned_cols=192 Identities=19% Similarity=0.251 Sum_probs=127.4
Q ss_pred CCCCceeEeEEEEcC---------------------------CeeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHH
Q 002186 744 RHKNLIRLLGFCYNR---------------------------HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVAR 795 (955)
Q Consensus 744 ~H~niv~l~g~~~~~---------------------------~~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~ 795 (955)
+|||||+++++|.+. ...|+||.-++ -+|++++.. ..+...+.-+..|+.+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~~s~r~~~~~laQlLE 352 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRHRSYRTGRVILAQLLE 352 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCCCchHHHHHHHHHHHH
Confidence 699999999987642 24689998775 488888864 4444455567789999
Q ss_pred HHHHHhcCCCCCcccCCCCCCCeeeC--CCC--CceECcccccccccccC-----CC---CcccccccCchhhhhccC--
Q 002186 796 GLCFLHHDCYPAIPHGDLKASNIVFD--ENM--EPHLAEFGFKYLTQLAD-----GS---FPAKIAWTESGEFYNAMK-- 861 (955)
Q Consensus 796 gl~~lH~~~~~~iiHrdlk~~NiLl~--~~~--~~ki~DfGl~~~~~~~~-----~~---~~~~~~~~~~~e~~~~~~-- 861 (955)
|+.|||.+ +|.|||+|+.|||+. +|. ...|+|||.+-..+... .+ ..++-...++||+....+
T Consensus 353 av~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp 429 (598)
T KOG4158|consen 353 AVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGP 429 (598)
T ss_pred HHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCC
Confidence 99999999 999999999999984 443 46899999864332211 11 111233356677776542
Q ss_pred ----CcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCC
Q 002186 862 ----EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR 937 (955)
Q Consensus 862 ----~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~R 937 (955)
.-.|+|.|+.|-+.||+++..-||+......-.. .-+++...+..+ +.....+.+++...++.||.+|
T Consensus 430 ~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~------r~Yqe~qLPalp--~~vpp~~rqlV~~lL~r~pskR 501 (598)
T KOG4158|consen 430 NAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT------RTYQESQLPALP--SRVPPVARQLVFDLLKRDPSKR 501 (598)
T ss_pred ceeeccchhhhhhhhhhHHHHhccCCcccccchheech------hhhhhhhCCCCc--ccCChHHHHHHHHHhcCCcccc
Confidence 2356899999999999999999998522111100 112222221111 1222345567777889999999
Q ss_pred CCHHHHHHHh
Q 002186 938 PSMEEALKLL 947 (955)
Q Consensus 938 Pt~~ev~~~L 947 (955)
|+..-....|
T Consensus 502 vsp~iAANvl 511 (598)
T KOG4158|consen 502 VSPNIAANVL 511 (598)
T ss_pred CCccHHHhHH
Confidence 9876544433
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.5e-15 Score=149.82 Aligned_cols=188 Identities=11% Similarity=0.053 Sum_probs=141.2
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
...+||+|.||+.+.|+ +-++++||||.=.. ..+.-.+..|.+..+.+. -+.|-..+-|-.+..+-.||+|.. |-|
T Consensus 32 VGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPS 109 (449)
T KOG1165|consen 32 VGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPS 109 (449)
T ss_pred eccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcC
Confidence 78899999999999998 67899999997432 222334455555555443 577777776666666778999988 568
Q ss_pred hhHHhh---cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-----CceECcccccccccccCCCC
Q 002186 773 LSEKIR---TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-----EPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 773 L~~~l~---~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~-----~~ki~DfGl~~~~~~~~~~~ 844 (955)
|+|+.. +..+..+...||.|+..-++|+|++ ..|.|||||+|.||..-+ .+.|.|||+|+.+.+.....
T Consensus 110 LEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~Tkq 186 (449)
T KOG1165|consen 110 LEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQ 186 (449)
T ss_pred HHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccc
Confidence 877653 4667778889999999999999999 999999999999997443 47899999998765443211
Q ss_pred ---------cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCC
Q 002186 845 ---------PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 887 (955)
Q Consensus 845 ---------~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~ 887 (955)
..+++.|++-....+...+.+-|.=|+|=|+...+-|.-||.+
T Consensus 187 HIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG 238 (449)
T KOG1165|consen 187 HIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 238 (449)
T ss_pred cCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence 1134444443334455667778999999999999999999874
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.5e-15 Score=150.44 Aligned_cols=133 Identities=14% Similarity=0.149 Sum_probs=95.4
Q ss_pred hhccCCCCCceEEEeCCCCcEEEEEEeecccchH---HH----------------------HHHHHHHHhccCCCC--ce
Q 002186 697 EEAARPQSAAGCKAVLPTGITVSVKKIEWGATRI---KI----------------------VSEFITRIGTVRHKN--LI 749 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~---~~----------------------~~~e~~~l~~l~H~n--iv 749 (955)
+.||+|+||+||+|...+|+.||||++....... .. ...|.+.+.++++.. +.
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 82 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP 82 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 5689999999999998899999999986532111 10 124455555554432 33
Q ss_pred eEeEEEEcCCeeEEEEeecCCCChhHH-hhcCCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeeeCCCCCce
Q 002186 750 RLLGFCYNRHQAYLLYDYLPNGNLSEK-IRTKRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPH 827 (955)
Q Consensus 750 ~l~g~~~~~~~~~lv~ey~~~gsL~~~-l~~~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl~~~~~~k 827 (955)
+.+++ ...++||||+++|.+... +.....-.+...++.+++.++.++|. . +|+|||+||+||+++ ++.++
T Consensus 83 ~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~-~~~~~ 154 (187)
T cd05119 83 KPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD-DGKVY 154 (187)
T ss_pred ceEec----CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-CCcEE
Confidence 44433 245899999999654321 21111114567889999999999998 6 999999999999999 89999
Q ss_pred ECcccccccc
Q 002186 828 LAEFGFKYLT 837 (955)
Q Consensus 828 i~DfGl~~~~ 837 (955)
++|||.+...
T Consensus 155 liDfg~a~~~ 164 (187)
T cd05119 155 IIDVPQAVEI 164 (187)
T ss_pred EEECcccccc
Confidence 9999998543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.7e-14 Score=140.62 Aligned_cols=135 Identities=15% Similarity=0.071 Sum_probs=115.3
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCC--CCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRH--KNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..+.+|+|.++.||++...+ ..++||....... ...+.+|+..+.+++| ..+.++++++...+..+++|||+++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 34678999999999999855 7899999865433 4568889999999987 589999999888888999999999888
Q ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 773 LSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 773 L~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
+... ++..+..++.+++++++++|....++++|+|+||+||+++..+.+++.|||.++.
T Consensus 80 ~~~~-----~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV-----SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cccC-----CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 8664 5667788899999999999987656899999999999999989999999998753
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.1e-14 Score=169.27 Aligned_cols=185 Identities=17% Similarity=0.151 Sum_probs=137.1
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccC---CCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
....+|+|+||.||+|+..+|+.||+|+=+....- +|.==.+++.|++ -+-|+.+..++...+..++|+||.+.|
T Consensus 702 I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W--EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~G 779 (974)
T KOG1166|consen 702 ISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW--EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYG 779 (974)
T ss_pred EEeeeccccceEEEEeecCCCcEEEEEeecCCCce--eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccc
Confidence 77889999999999999888999999986532110 0000012222332 234555555566677889999999999
Q ss_pred ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-------CCCCceECcccccccccccCC
Q 002186 772 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-------ENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 772 sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-------~~~~~ki~DfGl~~~~~~~~~ 842 (955)
+|.+++.. ..+|.-...++.|+++-+++||.. +|||+||||.|.+|. ....++|+|||.+.-...-..
T Consensus 780 tlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~ 856 (974)
T KOG1166|consen 780 TLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPD 856 (974)
T ss_pred cHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCC
Confidence 99999975 557888889999999999999999 999999999999994 234589999998754322221
Q ss_pred CC--cc--cccccCchhhhhccCCcccccchhHHHHHHHHHhCCCC
Q 002186 843 SF--PA--KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 884 (955)
Q Consensus 843 ~~--~~--~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p 884 (955)
.+ .. .+......|...+...+..+|-|.++-+++-|+.|+..
T Consensus 857 ~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 857 GTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred CcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 11 11 12223345788888999999999999999999999754
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.7e-14 Score=167.88 Aligned_cols=117 Identities=37% Similarity=0.605 Sum_probs=104.7
Q ss_pred ccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECC
Q 002186 510 SISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVS 589 (955)
Q Consensus 510 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 589 (955)
.++.|++++|.++|.+|..+..+++|+.|+|++|++.|.+|..++.+++|+.|||++|+++|.+|..++.+++|++|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeccCCcc--cccccCCCccCCCCCCCCCC-CCCCC
Q 002186 590 FNDISGSIPSGK--VLRLMGSSAYAGNPKLCGAP-LQPCH 626 (955)
Q Consensus 590 ~N~l~g~ip~~~--~~~~~~~~~~~~n~~lcg~~-l~~c~ 626 (955)
+|+++|.+|..- .........+.+|+.+|+.| +.+|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 999999999752 12223455789999999976 46775
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-13 Score=143.79 Aligned_cols=135 Identities=16% Similarity=0.185 Sum_probs=105.1
Q ss_pred hhhhcc-CCCCCceEEEeCCCCcEEEEEEeeccc--------------chHHHHHHHHHHHhccCCCCc--eeEeEEEEc
Q 002186 695 ECEEAA-RPQSAAGCKAVLPTGITVSVKKIEWGA--------------TRIKIVSEFITRIGTVRHKNL--IRLLGFCYN 757 (955)
Q Consensus 695 ~~~~~g-~g~~g~vy~~~~~~g~~vAvK~~~~~~--------------~~~~~~~~e~~~l~~l~H~ni--v~l~g~~~~ 757 (955)
....+| .|+.|+||++... |..+|||+...+. .....+.+|++.+.+++|++| ++.++++..
T Consensus 35 ~~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 35 QARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred cCceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 345687 8999999999885 6789999885321 123456789999999999885 677777544
Q ss_pred CC----eeEEEEeecCC-CChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccc
Q 002186 758 RH----QAYLLYDYLPN-GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 832 (955)
Q Consensus 758 ~~----~~~lv~ey~~~-gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfG 832 (955)
+. ..++||||+++ .+|.+++.... .. ...+.++++++.++|+. +|+|||+||+|||++.++.++++|||
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~~-l~--~~~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LIDfg 187 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQEAP-LS--EEQWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLIDFD 187 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhcCC-CC--HHHHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEECC
Confidence 32 23599999997 69998886532 11 23467899999999999 99999999999999998899999999
Q ss_pred cccc
Q 002186 833 FKYL 836 (955)
Q Consensus 833 l~~~ 836 (955)
.+..
T Consensus 188 ~~~~ 191 (239)
T PRK01723 188 RGEL 191 (239)
T ss_pred Cccc
Confidence 8754
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.2e-14 Score=154.87 Aligned_cols=166 Identities=20% Similarity=0.262 Sum_probs=120.7
Q ss_pred eeEEEEeecCCCChhHHhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~ 834 (955)
..|+.|++|...+|.+||.+ ..+|.....++.|++.|++| . +.+|||+||.||....+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 57899999999999999964 44788889999999999999 4 8899999999999999989999999996
Q ss_pred ccccccC--------CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccccc
Q 002186 835 YLTQLAD--------GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 835 ~~~~~~~--------~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
....... .....++.||+.||-+.+..|+.|+||||+|+|++|+++ -..+++. .....++-+
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er---------~~t~~d~r~ 474 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER---------IATLTDIRD 474 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH---------HHhhhhhhc
Confidence 5433222 122347889999999999999999999999999999998 2222110 011111111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 002186 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 943 (955)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev 943 (955)
.. ++ +....+. ..=..+..+.+.+.|.+||++.++
T Consensus 475 g~-ip-~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 475 GI-IP-PEFLQDY-PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred CC-CC-hHHhhcC-cHHHHHHHHhcCCCcccCchHHHH
Confidence 11 11 0111111 222367778899999999965554
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.1e-13 Score=150.78 Aligned_cols=141 Identities=18% Similarity=0.144 Sum_probs=98.9
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchH-------------------------------H----------HH
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRI-------------------------------K----------IV 733 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~-------------------------------~----------~~ 733 (955)
..+-+|.|++|.||+|++.+|+.||||+.+.+.... + .+
T Consensus 121 d~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 121 EEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 346799999999999999999999999986532100 0 12
Q ss_pred HHHHHHHhcc----CCCCceeEeEEEE-cCCeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHH-HHHHHhcCCCCC
Q 002186 734 SEFITRIGTV----RHKNLIRLLGFCY-NRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVAR-GLCFLHHDCYPA 807 (955)
Q Consensus 734 ~~e~~~l~~l----~H~niv~l~g~~~-~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~-gl~~lH~~~~~~ 807 (955)
..|.+.+.++ +|.+-|.+-.+|. .....+|||||++|++|.++......-..+.+++..+++ .+..+|.. +
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~---g 277 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRD---G 277 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhC---C
Confidence 3344444443 2333344333332 234579999999999998876531100134567776666 46778887 9
Q ss_pred cccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 808 IPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 808 iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
++|+|+||.||+++.++++++.|||++....
T Consensus 278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999986543
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.7e-13 Score=155.05 Aligned_cols=203 Identities=15% Similarity=0.120 Sum_probs=131.1
Q ss_pred hcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
.|+ .++.+..|+||.||..+.. +.+.+|+| +.+. ..+.+- ++.....|.+|
T Consensus 84 df~--~IklisngAygavylvrh~~trqrfa~k-iNkq----~lilRn--ilt~a~npfvv------------------- 135 (1205)
T KOG0606|consen 84 DFN--TIKLISNGAYGAVYLVRHKETRQRFAMK-INKQ----NLILRN--ILTFAGNPFVV------------------- 135 (1205)
T ss_pred ccc--eeEeeccCCCCceeeeeccccccchhhc-cccc----chhhhc--cccccCCccee-------------------
Confidence 366 7888999999999999854 56778884 3321 111110 23333344433
Q ss_pred CCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc--------
Q 002186 769 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA-------- 840 (955)
Q Consensus 769 ~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~-------- 840 (955)
||=.+.++.....+ .+++.+++|+|+. +|+|||+||.|.+|..-|.+|+.|||+.+.--..
T Consensus 136 --gDc~tllk~~g~lP------vdmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg 204 (1205)
T KOG0606|consen 136 --GDCATLLKNIGPLP------VDMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEG 204 (1205)
T ss_pred --chhhhhcccCCCCc------chhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhc
Confidence 44444454422111 1237899999998 9999999999999999999999999987542100
Q ss_pred ---------CCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCC
Q 002186 841 ---------DGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 911 (955)
Q Consensus 841 ---------~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (955)
......++++|.+||+.....|...+|.|++|+|+||.+.|+.||+++...+ .+...+......
T Consensus 205 ~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee------lfg~visd~i~w- 277 (1205)
T KOG0606|consen 205 HIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE------LFGQVISDDIEW- 277 (1205)
T ss_pred chHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH------HHhhhhhhhccc-
Confidence 0112347788899999988889999999999999999999999998653211 111111111000
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCC
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRP 938 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RP 938 (955)
++..+....+..+++.+.++.+|..|-
T Consensus 278 pE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 278 PEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred cccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 111112223445566667778888884
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.4e-12 Score=131.20 Aligned_cols=194 Identities=19% Similarity=0.274 Sum_probs=127.6
Q ss_pred HhccCCCCceeEeEEEEcC-----CeeEEEEeecCCCChhHHhhcC------CCHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 002186 740 IGTVRHKNLIRLLGFCYNR-----HQAYLLYDYLPNGNLSEKIRTK------RDWAAKYKIVLGVARGLCFLHHDCYPAI 808 (955)
Q Consensus 740 l~~l~H~niv~l~g~~~~~-----~~~~lv~ey~~~gsL~~~l~~~------~~~~~~~~i~~~ia~gl~~lH~~~~~~i 808 (955)
+-.+.|-|||+++.|+.+. ....++.|||+.|++..+|++. +....-.+++.||..||.|||+ |.|+|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~Ppi 199 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCcc
Confidence 3345699999999988653 3578899999999999999861 2222335789999999999997 58999
Q ss_pred ccCCCCCCCeeeCCCCCceECcccccccc------cccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCC
Q 002186 809 PHGDLKASNIVFDENMEPHLAEFGFKYLT------QLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 882 (955)
Q Consensus 809 iHrdlk~~NiLl~~~~~~ki~DfGl~~~~------~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~ 882 (955)
+|+++...-|.+..++-+||.--.....- .....+...+.+++.++++......+..+|||+||...+||..+.
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred ccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence 99999999999999988887543221100 000111112344455666666666777899999999999999876
Q ss_pred CCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 883 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 883 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.-...+..... ....+.... ...... .-.+.+..|++..|..||+|.+.+.+
T Consensus 280 iq~tnseS~~~--~ee~ia~~i----~~len~------lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 280 IQSTNSESKVE--VEENIANVI----IGLENG------LQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred eccCCCcceee--hhhhhhhhe----eeccCc------cccCcCcccccCCCCCCcchhhhhcC
Confidence 43222221110 000000000 110110 11245567999999999999998765
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.29 E-value=6e-13 Score=155.92 Aligned_cols=243 Identities=16% Similarity=0.168 Sum_probs=169.1
Q ss_pred hhhhccCCCCCceEEEeC--CCCcEEEEEEeecccch---HHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGATR---IKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~--~~g~~vAvK~~~~~~~~---~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.+|+|.|+.|-.... .....+|+|.+...... .+....|..+=..+. |+|++++++...+.+..+++.||.
T Consensus 24 ~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s 103 (601)
T KOG0590|consen 24 LSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYS 103 (601)
T ss_pred ccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcc
Confidence 556689999999887765 34456778877653322 233344555555555 999999999999999999999999
Q ss_pred CCCChhHHh-hcC---CCHHHHHHHHHHHHHHHHHHh-cCCCCCcccCCCCCCCeeeCCCC-CceECcccccccccccCC
Q 002186 769 PNGNLSEKI-RTK---RDWAAKYKIVLGVARGLCFLH-HDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 769 ~~gsL~~~l-~~~---~~~~~~~~i~~~ia~gl~~lH-~~~~~~iiHrdlk~~NiLl~~~~-~~ki~DfGl~~~~~~~~~ 842 (955)
.+|++.+.+ +.. .+-.....+..|+..|+.|+| .. ++.|||+||+|.+++..+ ..|++|||+|.......+
T Consensus 104 ~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g 180 (601)
T KOG0590|consen 104 DGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNG 180 (601)
T ss_pred cccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccccccCC
Confidence 999999998 543 234455678899999999999 76 999999999999999999 999999999876544111
Q ss_pred C-----Cccc-ccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 843 S-----FPAK-IAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 843 ~-----~~~~-~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
. ...+ ...|+++|...+. ......|+||.|+++.-+++|..|+........ ......... . ......+
T Consensus 181 ~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~-~~~~~~~~~---~-~~~~~~~ 255 (601)
T KOG0590|consen 181 AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG-RYSSWKSNK---G-RFTQLPW 255 (601)
T ss_pred cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc-cceeecccc---c-ccccCcc
Confidence 1 1123 4457777776663 445668999999999999999999874332211 111111110 0 0001111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
........++..+++..+|..|.+.+++..
T Consensus 256 ~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 256 NSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ccCChhhhhcccccccCCchhccccccccc
Confidence 222344556666778899999999888753
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.5e-13 Score=145.68 Aligned_cols=172 Identities=31% Similarity=0.495 Sum_probs=96.6
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
-+..||+.|++. .+|.++..+..|+.|.|++|.+. .+|..+.+|..|.+|||+.|+++ ..|..+..|+ |+.|-+++
T Consensus 77 t~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sN 152 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSN 152 (722)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEec
Confidence 344555555554 45555555555555555555554 34445555555555555555554 3444444432 45555555
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p 262 (955)
|+++ .+|+.++.+..|..||.+.|.+ . .+|..++.+.+|+.|.+..|++. .+|
T Consensus 153 Nkl~-~lp~~ig~~~tl~~ld~s~nei------------------------~-slpsql~~l~slr~l~vrRn~l~-~lp 205 (722)
T KOG0532|consen 153 NKLT-SLPEEIGLLPTLAHLDVSKNEI------------------------Q-SLPSQLGYLTSLRDLNVRRNHLE-DLP 205 (722)
T ss_pred Cccc-cCCcccccchhHHHhhhhhhhh------------------------h-hchHHhhhHHHHHHHHHhhhhhh-hCC
Confidence 5544 3444444444444444444444 3 35555666666666666666665 455
Q ss_pred ccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCC
Q 002186 263 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307 (955)
Q Consensus 263 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 307 (955)
.++..| .|..||++.|+++ .+|..|.+++.|++|-|.+|.+..
T Consensus 206 ~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 206 EELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred HHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCC
Confidence 555544 4667777777776 456677777777777777777763
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.6e-11 Score=140.06 Aligned_cols=196 Identities=33% Similarity=0.508 Sum_probs=96.6
Q ss_pred EECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCC-CCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC
Q 002186 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLR-NLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (955)
Q Consensus 106 L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~ 184 (955)
|+++.|.+... +..+..++.++.|++.+|.++ .+|.....+. +|+.||+++|.+. .+|..+..+++|+.|++++|.
T Consensus 98 l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~ 174 (394)
T COG4886 98 LDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFND 174 (394)
T ss_pred eeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCch
Confidence 45555544322 223334455555555555555 3344444443 5555555555555 344455555555555555555
Q ss_pred CcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCcc
Q 002186 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264 (955)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 264 (955)
++ .+|...+.+++|+.|++++|+++ .+|..+. .+..|++|++++|.+. .++..
T Consensus 175 l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~------------------------~~~~L~~l~~~~N~~~-~~~~~ 227 (394)
T COG4886 175 LS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIE------------------------LLSALEELDLSNNSII-ELLSS 227 (394)
T ss_pred hh-hhhhhhhhhhhhhheeccCCccc-cCchhhh------------------------hhhhhhhhhhcCCcce-ecchh
Confidence 55 33443445555555555555554 2333333 3334444445444322 23334
Q ss_pred ccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCc
Q 002186 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP 334 (955)
Q Consensus 265 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 334 (955)
+.++.++..+.+.+|++... +..++.+++++.|++++|.++.. +. ++.+.+++.|+++.|.+....|
T Consensus 228 ~~~~~~l~~l~l~~n~~~~~-~~~~~~l~~l~~L~~s~n~i~~i-~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 228 LSNLKNLSGLELSNNKLEDL-PESIGNLSNLETLDLSNNQISSI-SS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred hhhcccccccccCCceeeec-cchhccccccceecccccccccc-cc-ccccCccCEEeccCccccccch
Confidence 44555555555555554422 33445555555566665555532 22 5555566666666655554443
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.1e-13 Score=144.67 Aligned_cols=182 Identities=31% Similarity=0.483 Sum_probs=139.9
Q ss_pred CCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEE
Q 002186 268 LTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILF 347 (955)
Q Consensus 268 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 347 (955)
++--...||+.|++. .+|..+..+..|+.+.|..|.+. .+|..++++..|.+|+|+.|+++ .+|..++.++ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 444456777778776 56777777778888888888887 57888888888888888888887 5777777775 88888
Q ss_pred ccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCcccc
Q 002186 348 IWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSG 427 (955)
Q Consensus 348 L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 427 (955)
+++|+++ .+|+.++....|..||.+.|.+. .+|+.++.+.+|+.|.+..|++.. +|+.+. .-.|..||++.|+++
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~-lp~El~-~LpLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLED-LPEELC-SLPLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhh-CCHHHh-CCceeeeecccCcee-
Confidence 8888886 67888888888888888888887 677777777777777777777763 455555 345788888888887
Q ss_pred ccchhccCCCCCCEEECCCCcCCCCCCcchhh
Q 002186 428 EIPLKFSQLPDINYIDLSRNGFTGGIPTDINQ 459 (955)
Q Consensus 428 ~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~ 459 (955)
.+|..|.+|+.|++|-|.+|.++ ..|..++.
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~ 255 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICE 255 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCC-CChHHHHh
Confidence 67888888888888888888887 45555543
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.4e-11 Score=119.82 Aligned_cols=130 Identities=12% Similarity=0.070 Sum_probs=96.3
Q ss_pred hhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCcee-EeEEEEcCCeeEEEEeecCCCChh
Q 002186 696 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIR-LLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~-l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
.+.++.|.++.||++... |..|++|...........+..|++.+..+.+.++++ ++++. .+..++||||+++.++.
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 356788999999999875 778999987654322334577888888887666654 44443 33458999999998886
Q ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHhcCC--CCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 775 EKIRTKRDWAAKYKIVLGVARGLCFLHHDC--YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 775 ~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~--~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
+. . .....++.+++++++.||+.. ...++|+|+||.||+++ ++.+++.|||.+.
T Consensus 80 ~~--~----~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 80 TE--D----FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cc--c----ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 53 1 112345678999999999873 22369999999999999 6689999999874
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.6e-11 Score=140.93 Aligned_cols=144 Identities=14% Similarity=0.126 Sum_probs=91.0
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeCCC-CcEEEEEEeecccch----------------------------------
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVLPT-GITVSVKKIEWGATR---------------------------------- 729 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~~~-g~~vAvK~~~~~~~~---------------------------------- 729 (955)
+++...|+ . +-+|.|++|.||+|++.+ |+.||||+++.+...
T Consensus 116 ~~~F~~fd--~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e 192 (537)
T PRK04750 116 EEWFDDFD--I-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAE 192 (537)
T ss_pred HHHHHhcC--h-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHH
Confidence 34444454 3 789999999999999987 999999999743110
Q ss_pred -HHH------HHHHHHHHhcc----CCCCceeEeEEEEc-CCeeEEEEeecCCCChhHH--hhcC-CCHHHHHHHHHHHH
Q 002186 730 -IKI------VSEFITRIGTV----RHKNLIRLLGFCYN-RHQAYLLYDYLPNGNLSEK--IRTK-RDWAAKYKIVLGVA 794 (955)
Q Consensus 730 -~~~------~~~e~~~l~~l----~H~niv~l~g~~~~-~~~~~lv~ey~~~gsL~~~--l~~~-~~~~~~~~i~~~ia 794 (955)
.+. +.+|..-+.++ .+.+.|.+=.++.+ ....+|||||++|+++.++ +... .+ +..++...+
T Consensus 193 ~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d---~~~la~~~v 269 (537)
T PRK04750 193 FEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTD---MKLLAERGV 269 (537)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCC---HHHHHHHHH
Confidence 011 22333333333 24444444344433 3457899999999999874 3221 12 112222222
Q ss_pred HH-HHHHhcCCCCCcccCCCCCCCeeeCCCC----CceECcccccccc
Q 002186 795 RG-LCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEFGFKYLT 837 (955)
Q Consensus 795 ~g-l~~lH~~~~~~iiHrdlk~~NiLl~~~~----~~ki~DfGl~~~~ 837 (955)
+. +.-++.. +++|+|+||.||+++.++ ++++.|||+....
T Consensus 270 ~~~~~Qif~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 270 EVFFTQVFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HHHHHHHHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 11 1222334 999999999999999888 8999999987544
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.6e-11 Score=137.19 Aligned_cols=180 Identities=31% Similarity=0.476 Sum_probs=136.9
Q ss_pred CCCCcEEECCCCcCcccCCccccCCC-CCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLT-SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L 178 (955)
+..++.|++.+|.++ .+|.....+. +|++|++++|++. .+|..++.+++|+.|++++|+++ .+|...+.+++|+.|
T Consensus 115 ~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L 191 (394)
T COG4886 115 LTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNL 191 (394)
T ss_pred ccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhe
Confidence 467999999999998 6777777775 9999999999998 56677999999999999999998 577777789999999
Q ss_pred EecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCC
Q 002186 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (955)
Q Consensus 179 ~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~ 258 (955)
++++|.++ .+|.....+..|++|.+++|.+. ..+..+.+++++..+.+..|.+.. ++..+++++++++|++++|.++
T Consensus 192 ~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 192 DLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQIS 268 (394)
T ss_pred eccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccchhccccccceecccccccc
Confidence 99999998 67777777888999999999632 456667777777777766665442 2455566666666666666665
Q ss_pred CCCCccccCCCCCCEEEeccccccccCCc
Q 002186 259 GSIPKELSNLTKLESLFLFRNQLAGQVPW 287 (955)
Q Consensus 259 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 287 (955)
...+ ++.+.+++.|++++|.+....|.
T Consensus 269 ~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 269 SISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred cccc--ccccCccCEEeccCccccccchh
Confidence 3222 55666666666666666555443
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.3e-09 Score=113.79 Aligned_cols=140 Identities=14% Similarity=0.196 Sum_probs=109.5
Q ss_pred hhhccCCCCCceEEEeCCCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCC--CceeEeEEEEcC---CeeEEEEeec
Q 002186 696 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHK--NLIRLLGFCYNR---HQAYLLYDYL 768 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~--niv~l~g~~~~~---~~~~lv~ey~ 768 (955)
.+.++.|..+.||+++..+|+.+++|....... ....+..|++.++.+++. ++.++++++... +..++||||+
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 356789999999999987778999999765332 345678889999888764 456677777654 3668999999
Q ss_pred CCCChhHHhh-cCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------------
Q 002186 769 PNGNLSEKIR-TKRDWAAKYKIVLGVARGLCFLHHDC------------------------------------------- 804 (955)
Q Consensus 769 ~~gsL~~~l~-~~~~~~~~~~i~~~ia~gl~~lH~~~------------------------------------------- 804 (955)
+++++.+.+. ...+..++..++.+++++++++|+..
T Consensus 83 ~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (223)
T cd05154 83 DGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLR 162 (223)
T ss_pred CCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHH
Confidence 9998887664 45667778888889999999998521
Q ss_pred ----------CCCcccCCCCCCCeeeCC--CCCceECcccccc
Q 002186 805 ----------YPAIPHGDLKASNIVFDE--NMEPHLAEFGFKY 835 (955)
Q Consensus 805 ----------~~~iiHrdlk~~NiLl~~--~~~~ki~DfGl~~ 835 (955)
...++|+|+++.||+++. +..+.|.||+.+.
T Consensus 163 ~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 163 WLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 245799999999999998 5668899999764
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.7e-10 Score=126.18 Aligned_cols=240 Identities=14% Similarity=0.129 Sum_probs=159.5
Q ss_pred hcccchhhhccCCCCCceEEEeC--CCCcEEEEEEeecccch--HH-HHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGATR--IK-IVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~--~~g~~vAvK~~~~~~~~--~~-~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
.|. +...||.|.|+.||+... .++..+|+|.+...... .+ .-..|+-+...+ .|.++++....+....+.|+
T Consensus 266 df~--~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 266 DFG--LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred Ccc--eeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 355 888899999999998763 57788999988654322 11 123444444333 48899988877777777889
Q ss_pred EEeecCCCChhHHhh--cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC-CCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIR--TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~--~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~-~~~ki~DfGl~~~~~~~ 840 (955)
--|||++++....+. ...+...++++..|++.|+.++|+. .++|+|+||+||++..+ +..++.|||........
T Consensus 344 p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~ 420 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS 420 (524)
T ss_pred chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccccccccee
Confidence 999999998776553 3456777888999999999999977 99999999999999876 88999999987532221
Q ss_pred CCCCcccccccC-chhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 841 DGSFPAKIAWTE-SGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 841 ~~~~~~~~~~~~-~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
..........++ ++.......+-.+.|+||||.-+.|.+|+....+.+.. |... .... ....+...
T Consensus 421 ~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i------~~~~-~p~~~~~~--- 487 (524)
T KOG0601|consen 421 SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTI------RSGD-TPNLPGLK--- 487 (524)
T ss_pred cccccccccccccchhhccccccccccccccccccccccccCcccCccccc---ceee------eccc-ccCCCchH---
Confidence 111111112231 33344445567789999999999999998654432221 1111 0000 00011111
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLL 947 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L 947 (955)
.....++.....+|+..||.+.+...+.
T Consensus 488 ~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 488 LQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred HhhhhhhhhhcCCccccchhhhhhcccc
Confidence 2233444456678999999998876544
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.6e-10 Score=137.38 Aligned_cols=128 Identities=27% Similarity=0.318 Sum_probs=97.5
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCc--CCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEE
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN--FSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L 178 (955)
...+...+-+|.+. .++... ..++|++|-+..|. +....++.|..++.|++|||++|.=-+.+|..+++|-+||+|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 46777777777775 333332 23478888888886 444444558889999999999887777888899999999999
Q ss_pred EecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccc
Q 002186 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYN 231 (955)
Q Consensus 179 ~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n 231 (955)
+|++..+. .+|..+++|+.|.+|++..+.-...+|.....|++|++|.+..-
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeecc
Confidence 99988887 68888888889999988888766666777777888888877544
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.6e-09 Score=117.63 Aligned_cols=163 Identities=19% Similarity=0.260 Sum_probs=117.0
Q ss_pred CCCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChhHHhhcCCCHHHHHHHH
Q 002186 712 LPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIV 790 (955)
Q Consensus 712 ~~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~ 790 (955)
..+|.+|.|...+.... ..+...+-++.|+.+|||||++++..++.++..|||+|-+. -|..++.+... ....--+
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~~-~~v~~Gl 110 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELGK-EEVCLGL 110 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhHH-HHHHHHH
Confidence 56899999999876443 23445677888999999999999999999999999999985 57777765431 2223356
Q ss_pred HHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcccccccCchhhhhccCCcccccc
Q 002186 791 LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIAWTESGEFYNAMKEEMYMDV 868 (955)
Q Consensus 791 ~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~~~~~~~e~~~~~~~~~~~DV 868 (955)
.||++||.|||+.| .++|++|--..|+++..|.-|+++|-+......... ........+..|+... +.+...|.
T Consensus 111 ~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~--~s~~s~D~ 186 (690)
T KOG1243|consen 111 FQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEID--PSEWSIDS 186 (690)
T ss_pred HHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcC--ccccchhh
Confidence 79999999999876 899999999999999999999999987643222111 0000000011111110 11134599
Q ss_pred hhHHHHHHHHHhC
Q 002186 869 YGFGEIILEILTN 881 (955)
Q Consensus 869 ~S~Gvvl~Elltg 881 (955)
|-|||+++|++.|
T Consensus 187 ~~Lg~li~el~ng 199 (690)
T KOG1243|consen 187 WGLGCLIEELFNG 199 (690)
T ss_pred hhHHHHHHHHhCc
Confidence 9999999999998
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.7e-09 Score=120.98 Aligned_cols=237 Identities=16% Similarity=0.099 Sum_probs=160.8
Q ss_pred hhhhccC--CCCCceEEEeC---CCCcEEEEEEeecc---cchHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAAR--PQSAAGCKAVL---PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~--g~~g~vy~~~~---~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 765 (955)
....+|. |.+|.||++.. .++..+|+|+=+.. ......-.+|...-.+++ |+|.|+.+..+.+.+..++-+
T Consensus 118 ~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqt 197 (524)
T KOG0601|consen 118 ISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQT 197 (524)
T ss_pred cccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeee
Confidence 5567788 99999999885 57889999984321 111222234445445554 999999888888999999999
Q ss_pred eecCCCChhHHhhcC---CCHHHHHHHHHHHHH----HHHHHhcCCCCCcccCCCCCCCeeeCCC-CCceECcccccccc
Q 002186 766 DYLPNGNLSEKIRTK---RDWAAKYKIVLGVAR----GLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLT 837 (955)
Q Consensus 766 ey~~~gsL~~~l~~~---~~~~~~~~i~~~ia~----gl~~lH~~~~~~iiHrdlk~~NiLl~~~-~~~ki~DfGl~~~~ 837 (955)
|+|. .+|.++.+.. .+-...+.+..+..+ |++++|.. .|+|-|+||.||.+..+ ...+..|||+....
T Consensus 198 E~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i 273 (524)
T KOG0601|consen 198 ELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFGLVSKI 273 (524)
T ss_pred cccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCcceeEEc
Confidence 9995 6888877652 334445566666667 99999998 99999999999999999 88999999987654
Q ss_pred cccCCC------Cc-ccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 838 QLADGS------FP-AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 838 ~~~~~~------~~-~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
....-. .. .+-+-|+.+|.... .++.+.|+||+|.|.+|..++..++..+... .|... +..+.+.
T Consensus 274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-~W~~~---r~~~ip~--- 345 (524)
T KOG0601|consen 274 SDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNS-SWSQL---RQGYIPL--- 345 (524)
T ss_pred cCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCC-Ccccc---ccccCch---
Confidence 332211 01 12222555565544 4677789999999999999998876654322 12221 1111111
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+.......++......+++++|..|++.+++.+
T Consensus 346 --e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 346 --EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred --hhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 111111122333667789999999999987764
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=98.90 E-value=8.9e-09 Score=102.70 Aligned_cols=132 Identities=10% Similarity=0.078 Sum_probs=92.9
Q ss_pred hhccCCCCCceEEEeCCC-------CcEEEEEEeeccc-------------c----------hHHH----HHHHHHHHhc
Q 002186 697 EEAARPQSAAGCKAVLPT-------GITVSVKKIEWGA-------------T----------RIKI----VSEFITRIGT 742 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~-------g~~vAvK~~~~~~-------------~----------~~~~----~~~e~~~l~~ 742 (955)
..||.|.-+.||.|.-.+ +..+|||..+... . ..+. .++|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 358999999999998653 5799999875310 0 0112 2378888888
Q ss_pred cCC--CCceeEeEEEEcCCeeEEEEeecCCCChhH-Hhhc-CCCHHHHHHHHHHHHHHHHHH-hcCCCCCcccCCCCCCC
Q 002186 743 VRH--KNLIRLLGFCYNRHQAYLLYDYLPNGNLSE-KIRT-KRDWAAKYKIVLGVARGLCFL-HHDCYPAIPHGDLKASN 817 (955)
Q Consensus 743 l~H--~niv~l~g~~~~~~~~~lv~ey~~~gsL~~-~l~~-~~~~~~~~~i~~~ia~gl~~l-H~~~~~~iiHrdlk~~N 817 (955)
+.- -++-+.+++ ..-++||||+.++.+.. .++. ..+..+...+..+++.++.++ |.. +|||+|+++.|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDLs~~N 155 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADLSEYN 155 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence 753 344455554 35689999997654422 2322 223334456788999999999 667 99999999999
Q ss_pred eeeCCCCCceECccccccc
Q 002186 818 IVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 818 iLl~~~~~~ki~DfGl~~~ 836 (955)
|+++ ++.+.++|||-+..
T Consensus 156 IL~~-~~~v~iIDF~qav~ 173 (197)
T cd05146 156 MLWH-DGKVWFIDVSQSVE 173 (197)
T ss_pred EEEE-CCcEEEEECCCcee
Confidence 9997 46799999997643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-09 Score=132.98 Aligned_cols=127 Identities=27% Similarity=0.281 Sum_probs=100.2
Q ss_pred CCCcEEECCCCc--CcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEE
Q 002186 101 NELVDLNLSHNS--FSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 101 ~~L~~L~Ls~n~--l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L 178 (955)
+.|++|=+..|. +....+..|..++.|++||||+|.=-+.+|..++.|-+|++|||++..++ .+|..+++|..|.+|
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~L 623 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYL 623 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhee
Confidence 468888888886 44333444677999999999998877789999999999999999999998 799999999999999
Q ss_pred EecCCCCcccCCCCcCCCCCCcEEEccCCC--CCCCCchhccCCCCCcEEec
Q 002186 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNL--LNDQIPAELGMLKTVTHMEI 228 (955)
Q Consensus 179 ~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~--l~~~~p~~l~~l~~L~~L~l 228 (955)
++..+.-...+|.....|++|++|.+.... .+...-..+.+|.+|+.+..
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~ 675 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSI 675 (889)
T ss_pred ccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhhee
Confidence 999988766677777789999999997654 22223334445555555544
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.5e-09 Score=105.97 Aligned_cols=104 Identities=29% Similarity=0.367 Sum_probs=34.8
Q ss_pred CCcEEECCCCcCcccCCcccc-CCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhh-cCCCcceEEE
Q 002186 102 ELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLN 179 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~-~~L~~L~~L~ 179 (955)
+++.|+|++|.|+.+ . .++ .+.+|+.||||+|.++.. + .+..+++|++|++++|.++. ++..+ ..+++|++|+
T Consensus 20 ~~~~L~L~~n~I~~I-e-~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQISTI-E-NLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--EEE
T ss_pred ccccccccccccccc-c-chhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEE
Confidence 467788888887732 2 344 467788888888887743 2 46777888888888888774 44344 3577888888
Q ss_pred ecCCCCcccCC-CCcCCCCCCcEEEccCCCCC
Q 002186 180 LAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLN 210 (955)
Q Consensus 180 Ls~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 210 (955)
|++|.+...-- ..+..+++|++|+|.+|.++
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 88887754211 34556777777777777665
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.8e-10 Score=114.55 Aligned_cols=130 Identities=25% Similarity=0.286 Sum_probs=82.6
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
+.|+.||||+|.|+ .+..+..-+++++.|++|+|.+... +.++.|++|+.||||+|.++ .+..+-.+|-+.+.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 45777777777776 5556666677777777777777633 23667777777777777766 33344456667777777
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
++|.+.. -+.++.+-+|..||+++|++...- --..||+++-|+++.|.+|.+.+
T Consensus 360 a~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ld-----------------------eV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 360 AQNKIET--LSGLRKLYSLVNLDLSSNQIEELD-----------------------EVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhhhHhh--hhhhHhhhhheeccccccchhhHH-----------------------HhcccccccHHHHHhhcCCCccc
Confidence 7776642 234566677777777777664211 11245666666666666666654
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.83 E-value=5.1e-10 Score=127.86 Aligned_cols=127 Identities=32% Similarity=0.355 Sum_probs=78.3
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+..+..+++..|.+.. +-..+..+++|++|++.+|+|.++ ...+..+++|++||+++|.|+... .+..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 4556666677776653 333466777777777777777643 222666777777777777776432 345566677777
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc-hhccCCCCCcEEecccccc
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFY 233 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l 233 (955)
+++|.++. ...+..+++|+.+++++|.+...-+ . +..+.+++.++++.|.+
T Consensus 147 l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i 198 (414)
T KOG0531|consen 147 LSGNLISD--ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSI 198 (414)
T ss_pred eccCcchh--ccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCch
Confidence 77777763 2345557777777777777664433 1 34445555555555543
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.2e-09 Score=104.88 Aligned_cols=109 Identities=24% Similarity=0.268 Sum_probs=33.5
Q ss_pred cccCCCCCCEEEccCCcCCccCCcccc-CCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCc-CCCC
Q 002186 120 EIFNLTSLISLDISRNNFSGHFPGGIQ-SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQF-GSFK 197 (955)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~-~~l~ 197 (955)
.+.+..++++|+|++|.|+.+ ..++ .+.+|+.|||++|.++.. +.+..++.|++|++++|.++. +++.+ ..++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp 88 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLP 88 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-T
T ss_pred ccccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCc-cccchHHhCC
Confidence 345666789999999988753 2455 578888999999988843 257778888888888888874 33334 3578
Q ss_pred CCcEEEccCCCCCCCC-chhccCCCCCcEEecccccc
Q 002186 198 SLEFLHLAGNLLNDQI-PAELGMLKTVTHMEIGYNFY 233 (955)
Q Consensus 198 ~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~l~~n~l 233 (955)
+|++|+|++|++...- -..+..+++|+.|++.+|.+
T Consensus 89 ~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv 125 (175)
T PF14580_consen 89 NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPV 125 (175)
T ss_dssp T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GG
T ss_pred cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcc
Confidence 8888888888886421 12344455555555555543
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=5.7e-10 Score=127.47 Aligned_cols=216 Identities=28% Similarity=0.384 Sum_probs=131.7
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
.++.++..++.+.+.--. ...+..++.+++..|.+.. +-..+..+++|+.|++..|.+.+ +...+..+++|++|+|+
T Consensus 50 ~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls 126 (414)
T KOG0531|consen 50 DLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLS 126 (414)
T ss_pred hhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheecc
Confidence 345556555544322111 1567788888899998874 34457888999999999999885 33337778999999999
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCC-ccccCCCCCcEEeccCCCCCCC
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP-WQLGNMSEVQYLDIAGANLSGS 260 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p-~~~~~l~~L~~L~Ls~n~l~~~ 260 (955)
+|.++... .+..++.|+.|++++|.++.. ..+..++.|+.+++++|.+...-+ . ...+.+++.+++.+|.+...
T Consensus 127 ~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i 201 (414)
T KOG0531|consen 127 FNKITKLE--GLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI 201 (414)
T ss_pred cccccccc--chhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc
Confidence 99988543 366777899999999988642 334446677777777776654333 1 34555666666666665421
Q ss_pred CCccccCCCCCCEEEeccccccccCCccCcCCC--ccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCC
Q 002186 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVT--TLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (955)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (955)
..+..+..+..+++..|.++..-+. ..+. .|+.+++++|++.. ++..+..+..+..|++..|++.
T Consensus 202 --~~~~~~~~l~~~~l~~n~i~~~~~l--~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 202 --EGLDLLKKLVLLSLLDNKISKLEGL--NELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred --cchHHHHHHHHhhcccccceeccCc--ccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccc
Confidence 2233333444445555555533221 1122 25566666666552 2234455555555666555554
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.2e-09 Score=116.15 Aligned_cols=209 Identities=22% Similarity=0.161 Sum_probs=115.2
Q ss_pred cCCCCCCEEEccCCcCCccCC--ccccCCCCCcEEeCCCCCCCCCCc--hhhcCCCcceEEEecCCCCcccCCCCc-CCC
Q 002186 122 FNLTSLISLDISRNNFSGHFP--GGIQSLRNLLVLDAFSNSFSGSVP--AEISQLEHLKVLNLAGSYFSGPIPSQF-GSF 196 (955)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~LdL~~N~l~~~~p--~~~~~L~~L~~L~Ls~n~l~~~~p~~~-~~l 196 (955)
.++.+|+...|.+....- .+ .-...+++++.|||+.|-|...-| .-...|++|+.|+|+.|.+.....+.. ..+
T Consensus 118 sn~kkL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 467888888888876642 22 245678888888888887764322 234678888888888888764333221 256
Q ss_pred CCCcEEEccCCCCCCCC-chhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEE
Q 002186 197 KSLEFLHLAGNLLNDQI-PAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLF 275 (955)
Q Consensus 197 ~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 275 (955)
++|+.|.|+.|.++..- -..+...++|..|++..|. ..+.-......+..|++|+
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~------------------------~~~~~~~~~~i~~~L~~Ld 252 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANE------------------------IILIKATSTKILQTLQELD 252 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhccc------------------------ccceecchhhhhhHHhhcc
Confidence 77888888888775211 1112233444444444443 2111112222344455555
Q ss_pred eccccccccC-CccCcCCCccCEEEccCCCCCCC-CCcc-----cCCCCCCcEEecccccCCCC-CccccCCCCCccEEE
Q 002186 276 LFRNQLAGQV-PWEFSRVTTLKSLDLSDNRLSGP-IPES-----FADLKNLRLLSLMYNEMSGT-VPESLVQLPSLEILF 347 (955)
Q Consensus 276 L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~-~p~~-----~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~ 347 (955)
|++|++.... -...+.++.|..|+++.+.+... +|+. ...+++|++|+++.|++... --..+..+++|+.|.
T Consensus 253 Ls~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~ 332 (505)
T KOG3207|consen 253 LSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLR 332 (505)
T ss_pred ccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhh
Confidence 5555443211 01234455555555555555432 1221 23456677777777776421 012344456667777
Q ss_pred ccCCcCcc
Q 002186 348 IWNNYFSG 355 (955)
Q Consensus 348 L~~N~l~~ 355 (955)
+..|.++.
T Consensus 333 ~~~n~ln~ 340 (505)
T KOG3207|consen 333 ITLNYLNK 340 (505)
T ss_pred cccccccc
Confidence 77777653
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.78 E-value=5e-08 Score=93.48 Aligned_cols=130 Identities=18% Similarity=0.229 Sum_probs=97.1
Q ss_pred hccCCCCCceEEEeCCCCcEEEEEE-eeccc--------chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 698 EAARPQSAAGCKAVLPTGITVSVKK-IEWGA--------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~~~g~~vAvK~-~~~~~--------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
.+++|+-+.+|.+... |.++.+|. +++.- -..+...+|.+++++++---|-.-.=|..+++...|+|||.
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 4678999999998663 44455553 22211 11334567888888876555544455666788889999999
Q ss_pred CCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 769 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 769 ~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
++-.|.+.+... +..++..+-+-+.-||.. +|+|+|+.++||.+..+. +.+.|||++...
T Consensus 82 ~G~~lkd~l~~~-----~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 82 EGELLKDALEEA-----RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred CChhHHHHHHhc-----chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 998888888764 466777888888899999 999999999999998664 899999998643
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.77 E-value=9.6e-10 Score=116.84 Aligned_cols=158 Identities=23% Similarity=0.257 Sum_probs=105.0
Q ss_pred CCCCcEEECCCCcCcccCC--ccccCCCCCCEEEccCCcCCccCC--ccccCCCCCcEEeCCCCCCCCCCchh-hcCCCc
Q 002186 100 FNELVDLNLSHNSFSGQFP--VEIFNLTSLISLDISRNNFSGHFP--GGIQSLRNLLVLDAFSNSFSGSVPAE-ISQLEH 174 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~LdL~~N~l~~~~p~~-~~~L~~ 174 (955)
+.+|+...|.+.... ..+ .....|++++.||||+|-|....| .-...|++|+.|+|+.|.+.-..... -..+++
T Consensus 120 ~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 120 LKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred HHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 457888888776654 233 356679999999999998875433 33567999999999999986433222 236789
Q ss_pred ceEEEecCCCCcccC-CCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCC-CccccCCCCCcEEec
Q 002186 175 LKVLNLAGSYFSGPI-PSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI-PWQLGNMSEVQYLDI 252 (955)
Q Consensus 175 L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~-p~~~~~l~~L~~L~L 252 (955)
|+.|.|++|.++-.- -.....+++|+.|+|..|.....--.....++.|+.|+|++|++...- -...+.++.|+.|++
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnl 278 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNL 278 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhc
Confidence 999999999987321 223456789999999999533333334455666777777776653211 123455666666666
Q ss_pred cCCCCC
Q 002186 253 AGANLS 258 (955)
Q Consensus 253 s~n~l~ 258 (955)
+.+.+.
T Consensus 279 s~tgi~ 284 (505)
T KOG3207|consen 279 SSTGIA 284 (505)
T ss_pred cccCcc
Confidence 666554
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.76 E-value=5.8e-09 Score=83.65 Aligned_cols=61 Identities=39% Similarity=0.597 Sum_probs=50.5
Q ss_pred cccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcc
Q 002186 533 VELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDI 593 (955)
Q Consensus 533 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 593 (955)
++|++|++++|+++...+..|..+++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4678888888888877777888888888888888888888888888888888888888875
|
... |
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.71 E-value=4e-09 Score=106.39 Aligned_cols=129 Identities=21% Similarity=0.243 Sum_probs=73.5
Q ss_pred CCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEEC
Q 002186 365 SKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDL 444 (955)
Q Consensus 365 ~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 444 (955)
..|+.+|||+|.++ .+-.+..-.+.++.|+++.|.+...- .+..+++|+.||||+|.++ .+..+-.++-+++.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v~--nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTVQ--NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeeeh--hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 34444444444443 22222222333444444444443221 2556778888888888877 44455566778888888
Q ss_pred CCCcCCCCCCcchhhccCCcccccCCCCCCCCC-CCcccCCCCccccccCcccccCC
Q 002186 445 SRNGFTGGIPTDINQASKLEYFNVSNNPKLGGM-IPAQTWSLPSLQNFSASACNITG 500 (955)
Q Consensus 445 s~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~-~p~~~~~l~~L~~l~ls~n~l~~ 500 (955)
+.|.+... +.+..+-+|.+||+++|+ +... .-..++++|.|+.+.+.+|.+.+
T Consensus 360 a~N~iE~L--SGL~KLYSLvnLDl~~N~-Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 360 AQNKIETL--SGLRKLYSLVNLDLSSNQ-IEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhhhHhhh--hhhHhhhhheeccccccc-hhhHHHhcccccccHHHHHhhcCCCccc
Confidence 88876521 235556677888888873 2211 12345667777777777666654
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.70 E-value=9.3e-09 Score=82.47 Aligned_cols=34 Identities=38% Similarity=0.505 Sum_probs=12.2
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNF 137 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 137 (955)
++|++++|+++...+..|.++++|++|++++|.+
T Consensus 4 ~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l 37 (61)
T PF13855_consen 4 ESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNL 37 (61)
T ss_dssp SEEEETSSTESEECTTTTTTGTTESEEEETSSSE
T ss_pred cEEECCCCCCCccCHHHHcCCCCCCEeEccCCcc
Confidence 3333333333333333333333333333333333
|
... |
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.2e-09 Score=113.11 Aligned_cols=233 Identities=20% Similarity=0.243 Sum_probs=124.7
Q ss_pred CCCCcEEECCCCcCcc----cCCccccCCCCCCEEEccCCcCCc----cCCc-------cccCCCCCcEEeCCCCCCCCC
Q 002186 100 FNELVDLNLSHNSFSG----QFPVEIFNLTSLISLDISRNNFSG----HFPG-------GIQSLRNLLVLDAFSNSFSGS 164 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~----~~p~-------~~~~l~~L~~LdL~~N~l~~~ 164 (955)
+..++.++||+|.|.. .+...+.+.++|+.-++|+- ++| .+|. ++...+.|++||||.|.|...
T Consensus 29 ~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~ 107 (382)
T KOG1909|consen 29 MDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPK 107 (382)
T ss_pred cCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCcc
Confidence 4567777777777753 23344556667777777653 222 2332 223344666666666666543
Q ss_pred Cchh----hcCCCcceEEEecCCCCcccC-------------CCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEe
Q 002186 165 VPAE----ISQLEHLKVLNLAGSYFSGPI-------------PSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHME 227 (955)
Q Consensus 165 ~p~~----~~~L~~L~~L~Ls~n~l~~~~-------------p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 227 (955)
-+.. +..++.|++|.|.+|.+.-.- -.-.++-+.|+++....|++...--..
T Consensus 108 g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~----------- 176 (382)
T KOG1909|consen 108 GIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATA----------- 176 (382)
T ss_pred chHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHH-----------
Confidence 3332 345566666666666553110 111233344555555555543211000
Q ss_pred cccccccCCCCccccCCCCCcEEeccCCCCCCC----CCccccCCCCCCEEEeccccccccC----CccCcCCCccCEEE
Q 002186 228 IGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLAGQV----PWEFSRVTTLKSLD 299 (955)
Q Consensus 228 l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~ 299 (955)
+...+...+.|+.+.++.|.+... +-..+..+++|+.|||.+|-|+..- ...+..+++|+.|+
T Consensus 177 ---------~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~ 247 (382)
T KOG1909|consen 177 ---------LAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELN 247 (382)
T ss_pred ---------HHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeec
Confidence 111233334555555555554311 1123556677777777777665321 22345566777777
Q ss_pred ccCCCCCCCCCccc-----CCCCCCcEEecccccCCCC----CccccCCCCCccEEEccCCcC
Q 002186 300 LSDNRLSGPIPESF-----ADLKNLRLLSLMYNEMSGT----VPESLVQLPSLEILFIWNNYF 353 (955)
Q Consensus 300 Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l 353 (955)
+++|.+...-...| ...++|++|.+.+|.++.. +-..+...+.|..|+|++|.+
T Consensus 248 l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 248 LGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 77777764433222 2367788888888877632 222344567888888888887
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.7e-09 Score=112.11 Aligned_cols=247 Identities=21% Similarity=0.261 Sum_probs=171.7
Q ss_pred cccCCCCCCEEEccCCcCCc----cCCccccCCCCCcEEeCCCCCCCC----CCchh-------hcCCCcceEEEecCCC
Q 002186 120 EIFNLTSLISLDISRNNFSG----HFPGGIQSLRNLLVLDAFSNSFSG----SVPAE-------ISQLEHLKVLNLAGSY 184 (955)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~LdL~~N~l~~----~~p~~-------~~~L~~L~~L~Ls~n~ 184 (955)
.+..+..+++|+||+|.|.. .+...+.+.++|+.-++++ -++| .+|+. +..+++|++||||.|.
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd-~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD-MFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh-hhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 45567899999999999864 2445667788999998875 3444 34443 4566799999999999
Q ss_pred CcccCCCC----cCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCC
Q 002186 185 FSGPIPSQ----FGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (955)
Q Consensus 185 l~~~~p~~----~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~ 260 (955)
|.-.-+.. +.+++.|++|.|.+|.+...--..++. -|.+|. .|. -+++-+.|+++..++|.+...
T Consensus 104 ~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~ 172 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASKPKLRVFICGRNRLENG 172 (382)
T ss_pred cCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCCcceEEEEeeccccccc
Confidence 86444433 456889999999999774221111111 111111 111 234456889999999988632
Q ss_pred C----CccccCCCCCCEEEecccccccc----CCccCcCCCccCEEEccCCCCCCC----CCcccCCCCCCcEEeccccc
Q 002186 261 I----PKELSNLTKLESLFLFRNQLAGQ----VPWEFSRVTTLKSLDLSDNRLSGP----IPESFADLKNLRLLSLMYNE 328 (955)
Q Consensus 261 ~----p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~ 328 (955)
- -..+...+.|+.+.+..|.+.-. +...|..+++|+.|||.+|-|+.. +...+..+++|+.|+++++.
T Consensus 173 ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcl 252 (382)
T KOG1909|consen 173 GATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCL 252 (382)
T ss_pred cHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccc
Confidence 2 23456678999999999987521 123477899999999999998743 34456788999999999999
Q ss_pred CCCCCccc----c-CCCCCccEEEccCCcCccc----CCcccCCCCCCCeeecCCCccc
Q 002186 329 MSGTVPES----L-VQLPSLEILFIWNNYFSGS----LPENLGRNSKLRWVDVSTNNFN 378 (955)
Q Consensus 329 l~~~~p~~----l-~~l~~L~~L~L~~N~l~~~----~p~~~~~~~~L~~L~ls~N~l~ 378 (955)
+...-... + ...|+|+.|.+.+|.++.. +...+...+.|..|+|++|.+.
T Consensus 253 l~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 253 LENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 87532222 2 2468999999999998742 2334556788999999999994
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.66 E-value=1e-07 Score=94.91 Aligned_cols=123 Identities=17% Similarity=0.228 Sum_probs=80.8
Q ss_pred ceEEEeCCCCcEEEEEEeecccc---------------------------hHHHHHHHHHHHhccCCCC--ceeEeEEEE
Q 002186 706 AGCKAVLPTGITVSVKKIEWGAT---------------------------RIKIVSEFITRIGTVRHKN--LIRLLGFCY 756 (955)
Q Consensus 706 ~vy~~~~~~g~~vAvK~~~~~~~---------------------------~~~~~~~e~~~l~~l~H~n--iv~l~g~~~ 756 (955)
.||.|..++|..||||.-+.+.. ......+|.+.|.++.... +-+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999999999999998753210 0123578999999987664 44555442
Q ss_pred cCCeeEEEEeecC--CCChhHHhhcCCCHHHHHHHHHHHHHHHHHH-hcCCCCCcccCCCCCCCeeeCCCCCceECcccc
Q 002186 757 NRHQAYLLYDYLP--NGNLSEKIRTKRDWAAKYKIVLGVARGLCFL-HHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833 (955)
Q Consensus 757 ~~~~~~lv~ey~~--~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~l-H~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl 833 (955)
.-.|||||++ +..+..+............++.++.+.+..+ |.. +|+|+|+.+.||+++++ .+.|+|||-
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~iIDf~q 152 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYIIDFGQ 152 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE--GTT
T ss_pred ---CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEEEecCc
Confidence 3479999998 5455443333322334556777777766664 566 99999999999999987 999999997
Q ss_pred ccc
Q 002186 834 KYL 836 (955)
Q Consensus 834 ~~~ 836 (955)
+..
T Consensus 153 av~ 155 (188)
T PF01163_consen 153 AVD 155 (188)
T ss_dssp EEE
T ss_pred cee
Confidence 643
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.1e-08 Score=72.58 Aligned_cols=41 Identities=37% Similarity=0.688 Sum_probs=30.4
Q ss_pred hhhHHHHHHhhhhCC-CCCCCCCCCCCCCCCCCCCCCCCccccceeec
Q 002186 25 DPYSEALLSLKSELV-DDFNSLHDWFVPPGVNPAGKIYACSWSGVKCN 71 (955)
Q Consensus 25 ~~~~~all~~k~~~~-~~~~~l~~w~~~~~~~~~~~~~~c~w~gv~C~ 71 (955)
++|++||++||+++. ++.+.+.+|..+. ..+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~------~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSS------DSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--------S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcC------CCCCeeeccEEeC
Confidence 578999999999997 5778999998641 2589999999996
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.57 E-value=7.8e-07 Score=97.33 Aligned_cols=163 Identities=16% Similarity=0.199 Sum_probs=121.2
Q ss_pred CCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEc----CCeeEEEEeecCC-CChhH
Q 002186 703 QSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYDYLPN-GNLSE 775 (955)
Q Consensus 703 ~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~ey~~~-gsL~~ 775 (955)
...+.||+.. -||..|..|++...+ ........-++..+++.|+|||++..++.. +...++||+|.|+ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 3457899984 589999999994322 122223345778889999999999998873 4468999999986 47777
Q ss_pred Hhhc-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 776 KIRT-----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 776 ~l~~-----------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
.-.. +.+....+.++.|++.||.++|+. |..-+-+.+.+|+++.+.+++|+..|+..+.+
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeec
Confidence 5422 123456688999999999999998 88889999999999999999999888876654
Q ss_pred ccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCC
Q 002186 839 LADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGR 883 (955)
Q Consensus 839 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~ 883 (955)
.... +..+.. -+-|.=-+|.+++.|.||..
T Consensus 445 ~d~~------------~~le~~---Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 445 EDPT------------EPLESQ---QQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCCC------------cchhHH---hhhhHHHHHHHHHHHhhccc
Confidence 4321 111111 12388899999999999864
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=5.1e-07 Score=95.55 Aligned_cols=132 Identities=11% Similarity=0.071 Sum_probs=93.8
Q ss_pred cCCCCCceEEEeCCCCcEEEEEEeecccc------------hHHHHHHHHHHHhccCCCCc--eeEeEEEEc-----CCe
Q 002186 700 ARPQSAAGCKAVLPTGITVSVKKIEWGAT------------RIKIVSEFITRIGTVRHKNL--IRLLGFCYN-----RHQ 760 (955)
Q Consensus 700 g~g~~g~vy~~~~~~g~~vAvK~~~~~~~------------~~~~~~~e~~~l~~l~H~ni--v~l~g~~~~-----~~~ 760 (955)
-+.....|++.+. +|+.|.||+...... ....+.+|.+.+.++...+| .+.+++.+. ...
T Consensus 31 ~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~ 109 (268)
T PRK15123 31 RELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRT 109 (268)
T ss_pred ecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccce
Confidence 3333444667665 678899997643221 11136678888877743333 344555543 235
Q ss_pred eEEEEeecCCC-ChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-------CCCceE
Q 002186 761 AYLLYDYLPNG-NLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-------NMEPHL 828 (955)
Q Consensus 761 ~~lv~ey~~~g-sL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-------~~~~ki 828 (955)
.++||||+++- +|.+++.. ..+...+..++.++++.++-||.. +|+|+|++++|||++. +..+.+
T Consensus 110 s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~L 186 (268)
T PRK15123 110 SFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKLSV 186 (268)
T ss_pred eEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceEEE
Confidence 78999999876 89888753 233455678999999999999999 9999999999999985 467899
Q ss_pred Ccccccc
Q 002186 829 AEFGFKY 835 (955)
Q Consensus 829 ~DfGl~~ 835 (955)
+||+-++
T Consensus 187 IDl~r~~ 193 (268)
T PRK15123 187 IDLHRAQ 193 (268)
T ss_pred EECCccc
Confidence 9999764
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=6.2e-07 Score=85.44 Aligned_cols=139 Identities=15% Similarity=0.177 Sum_probs=98.4
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEE-eeccc--------chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKK-IEWGA--------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~-~~~~~--------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
....+-+|+-+.|+++.. .|+...||. ..++- -..+...+|++.+.+++---|.--.=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 356677899999999987 477766664 32211 12445678899988876444433333445555667999
Q ss_pred eecCC-CChhHHhhcCC---CHHHH-HHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC---CceECcccccccc
Q 002186 766 DYLPN-GNLSEKIRTKR---DWAAK-YKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EPHLAEFGFKYLT 837 (955)
Q Consensus 766 ey~~~-gsL~~~l~~~~---~~~~~-~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~---~~ki~DfGl~~~~ 837 (955)
||.++ -++.+++.... ..... ...+..+-+.+.-||.. +|||+|+..+||++..++ .+.+.|||++...
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 99976 37888886522 22233 57888999999999999 999999999999997554 4579999997543
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.41 E-value=9.4e-08 Score=112.45 Aligned_cols=234 Identities=17% Similarity=0.131 Sum_probs=140.3
Q ss_pred hhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 697 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
+-+-+|.++.++-+.- .+|...++|...... .+.+....+-...-..+||-+++..--+......+||++|+.+|
T Consensus 810 ~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~ 889 (1205)
T KOG0606|consen 810 KPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGG 889 (1205)
T ss_pred ccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccC
Confidence 3445677777775542 244444554443211 11112222222222234566665544433456789999999999
Q ss_pred ChhHHhhcCC--C-HHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc--------
Q 002186 772 NLSEKIRTKR--D-WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA-------- 840 (955)
Q Consensus 772 sL~~~l~~~~--~-~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~-------- 840 (955)
+|...++... + ...|. ....+.++.+|||.. .++|||+||.|+++..++..+++|||........
T Consensus 890 ~~~Skl~~~~~~saepaRs-~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg 965 (1205)
T KOG0606|consen 890 DLPSKLHNSGCLSAEPARS-PILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSG 965 (1205)
T ss_pred CchhhhhcCCCcccccccc-hhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccccccCcCCccc
Confidence 9999998743 2 22333 334577889999988 7999999999999999999999999843211000
Q ss_pred C-------------------------CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc
Q 002186 841 D-------------------------GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP 895 (955)
Q Consensus 841 ~-------------------------~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~ 895 (955)
. .....+++-|.+||...+......+|.|+.|++++|.++|..||......+
T Consensus 966 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~--- 1042 (1205)
T KOG0606|consen 966 PSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQ--- 1042 (1205)
T ss_pred ccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhh---
Confidence 0 000112334556677777777888999999999999999999987543311
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHH
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 941 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ 941 (955)
.++.+...... ......+...++.+++..-+..+|.+|-.|.
T Consensus 1043 ---~f~ni~~~~~~-~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1043 ---IFENILNRDIP-WPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred ---hhhccccCCCC-CCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 12222222111 1111122223344555556677888886655
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.5e-06 Score=85.88 Aligned_cols=129 Identities=16% Similarity=0.167 Sum_probs=89.7
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc-----------------------hHHHHHHHHHHHhccCCC--Cce
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-----------------------RIKIVSEFITRIGTVRHK--NLI 749 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~-----------------------~~~~~~~e~~~l~~l~H~--niv 749 (955)
..+.||.|.-+.||.|..+.|.++|||.=+.+.. ......+|.+.|.++.-. .|-
T Consensus 95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP 174 (304)
T COG0478 95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP 174 (304)
T ss_pred hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence 4588999999999999999999999996433211 123457888888888544 455
Q ss_pred eEeEEEEcCCeeEEEEeecCCCChhHHhhcCCCHHHHHH-HHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceE
Q 002186 750 RLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYK-IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828 (955)
Q Consensus 750 ~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~-i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki 828 (955)
+.+++ +.-.+||||.++-.|...=-......+.+. |+..+..+. .. +|||+|+.+=||++++++.+.+
T Consensus 175 ~P~~~----nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~----~~---GiVHGDlSefNIlV~~dg~~~v 243 (304)
T COG0478 175 KPIAW----NRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAY----RR---GIVHGDLSEFNILVTEDGDIVV 243 (304)
T ss_pred Ccccc----ccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHH----Hc---CccccCCchheEEEecCCCEEE
Confidence 55544 344799999988666543212223333332 333333322 44 9999999999999999999999
Q ss_pred Cccccc
Q 002186 829 AEFGFK 834 (955)
Q Consensus 829 ~DfGl~ 834 (955)
.||--+
T Consensus 244 IDwPQ~ 249 (304)
T COG0478 244 IDWPQA 249 (304)
T ss_pred EeCccc
Confidence 999743
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.4e-06 Score=95.80 Aligned_cols=135 Identities=19% Similarity=0.191 Sum_probs=88.3
Q ss_pred hhhccCCCCCceEEEeCCCCcEEEEEEeecccch-------------------------------HHH----------HH
Q 002186 696 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR-------------------------------IKI----------VS 734 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~-------------------------------~~~----------~~ 734 (955)
.+-++.++-|.||+|++++|+.||||+.+.+-.. .++ +.
T Consensus 130 ~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 130 PEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 4667899999999999999999999998643211 001 12
Q ss_pred HHHHHHhccC-----CCCceeEeEEEE-cCCeeEEEEeecCCCChhHHh--hc-CCCHHHHHHHHHHHHHHH-HHHhcCC
Q 002186 735 EFITRIGTVR-----HKNLIRLLGFCY-NRHQAYLLYDYLPNGNLSEKI--RT-KRDWAAKYKIVLGVARGL-CFLHHDC 804 (955)
Q Consensus 735 ~e~~~l~~l~-----H~niv~l~g~~~-~~~~~~lv~ey~~~gsL~~~l--~~-~~~~~~~~~i~~~ia~gl-~~lH~~~ 804 (955)
.|..-+.+++ .|+|. +=.+|+ -.+...|+|||++|-.+.+.. +. ..+ +..++..++++. .-+-..
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~-VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d---~k~ia~~~~~~f~~q~~~d- 284 (517)
T COG0661 210 REAANAERFRENFKDDPDVY-VPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGID---RKELAELLVRAFLRQLLRD- 284 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeE-eceeehhccCCcEEEEEeeCCEecccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhc-
Confidence 3333333332 33332 223333 245678999999998888874 33 223 344444333332 222224
Q ss_pred CCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 805 YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 805 ~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
+++|.|..|.||+++.+++.-.-|||+....
T Consensus 285 --gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l 315 (517)
T COG0661 285 --GFFHADPHPGNILVRSDGRIVLLDFGIVGRL 315 (517)
T ss_pred --CccccCCCccceEEecCCcEEEEcCcceecC
Confidence 8999999999999999999999999986543
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.11 E-value=5.4e-07 Score=91.41 Aligned_cols=84 Identities=30% Similarity=0.289 Sum_probs=41.1
Q ss_pred CCCCcEEeCCCCCCCC--CCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCC-CchhccCCCCCc
Q 002186 148 LRNLLVLDAFSNSFSG--SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ-IPAELGMLKTVT 224 (955)
Q Consensus 148 l~~L~~LdL~~N~l~~--~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~ 224 (955)
.+.++.|||.+|.++. .+-.-+.+|+.|++|+|+.|.+...|-..-..+.+|++|-|.+..+.-. .-..+..++.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 3445555555555542 1222234566666666666665543322113445666666666554321 222344455555
Q ss_pred EEecccc
Q 002186 225 HMEIGYN 231 (955)
Q Consensus 225 ~L~l~~n 231 (955)
.|.++.|
T Consensus 150 elHmS~N 156 (418)
T KOG2982|consen 150 ELHMSDN 156 (418)
T ss_pred hhhhccc
Confidence 5555555
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.10 E-value=5.8e-08 Score=109.13 Aligned_cols=40 Identities=28% Similarity=0.353 Sum_probs=16.8
Q ss_pred ccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCc
Q 002186 145 IQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFS 186 (955)
Q Consensus 145 ~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~ 186 (955)
+.-++.|+.|||++|+++.. ..+..|++|++|||++|.+.
T Consensus 183 Lqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~ 222 (1096)
T KOG1859|consen 183 LQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR 222 (1096)
T ss_pred HHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc
Confidence 33344444444444444321 13444444444444444443
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.06 E-value=2e-05 Score=80.80 Aligned_cols=103 Identities=21% Similarity=0.319 Sum_probs=79.6
Q ss_pred HHHHHHHHHHhccCCC--CceeEeEEEEcCC----eeEEEEeecCCC-ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHh
Q 002186 731 KIVSEFITRIGTVRHK--NLIRLLGFCYNRH----QAYLLYDYLPNG-NLSEKIRT--KRDWAAKYKIVLGVARGLCFLH 801 (955)
Q Consensus 731 ~~~~~e~~~l~~l~H~--niv~l~g~~~~~~----~~~lv~ey~~~g-sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH 801 (955)
....+|.+.+.+++.. .+.+.+++.+... ..++|+|++++- +|.+++.. ..+...+..++.++++.++-||
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence 3456677776666533 3445666665432 458999999974 79998876 3445567789999999999999
Q ss_pred cCCCCCcccCCCCCCCeeeCCCC---CceECccccccc
Q 002186 802 HDCYPAIPHGDLKASNIVFDENM---EPHLAEFGFKYL 836 (955)
Q Consensus 802 ~~~~~~iiHrdlk~~NiLl~~~~---~~ki~DfGl~~~ 836 (955)
.. +|+|+|+++.|||++.+. .+.++||+-++.
T Consensus 136 ~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 136 DA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99 999999999999999876 789999997654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=7.7e-05 Score=74.72 Aligned_cols=132 Identities=11% Similarity=0.059 Sum_probs=96.6
Q ss_pred ccCCCCCceEEEeCCCCcEEEEEEeecc-------cchHHHHHHHHHHHhccCCCC--ceeEeEEEE-c--C--CeeEEE
Q 002186 699 AARPQSAAGCKAVLPTGITVSVKKIEWG-------ATRIKIVSEFITRIGTVRHKN--LIRLLGFCY-N--R--HQAYLL 764 (955)
Q Consensus 699 ~g~g~~g~vy~~~~~~g~~vAvK~~~~~-------~~~~~~~~~e~~~l~~l~H~n--iv~l~g~~~-~--~--~~~~lv 764 (955)
-|+||.+-|++-... |..+-+|+-... ......|.+|...|.++...+ +.+.. ++. . + -..+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 367888889987764 457888986521 223567889999988875332 33444 332 1 1 246899
Q ss_pred EeecCC-CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC--ceECcccccc
Q 002186 765 YDYLPN-GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--PHLAEFGFKY 835 (955)
Q Consensus 765 ~ey~~~-gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~--~ki~DfGl~~ 835 (955)
+|-+++ -||.+++.+ ..+...+..+..++++.++-||+. ++.|+|+-+.||+++.++. +++.||--++
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 998864 489888855 224556678999999999999999 9999999999999986666 8889987543
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.2e-07 Score=106.69 Aligned_cols=103 Identities=28% Similarity=0.328 Sum_probs=60.4
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCch-hhcCCCcceEEEe
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPA-EISQLEHLKVLNL 180 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~-~~~~L~~L~~L~L 180 (955)
.|..-+.++|.+. ....++.-++.|+.||||+|++...- .+..++.|++|||++|.+.. +|. ....+. |+.|.|
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRH-VPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhcc-ccccchhhhh-heeeee
Confidence 4555666666665 34455666667777777777766432 56666777777777776663 332 222333 666666
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND 211 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (955)
++|.++.. ..+.+|++|+.||+++|-+.+
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~ 268 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSE 268 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhc
Confidence 66666532 235566666666666665543
|
|
| >KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.95 E-value=2.2e-07 Score=94.21 Aligned_cols=57 Identities=26% Similarity=0.244 Sum_probs=29.2
Q ss_pred CCCCCCEEEecccc-ccccCCccCcCCCccCEEEccCCCCCCCCCcc---cCCCCCCcEEecc
Q 002186 267 NLTKLESLFLFRNQ-LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPES---FADLKNLRLLSLM 325 (955)
Q Consensus 267 ~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~---~~~l~~L~~L~Ls 325 (955)
.+++|..|||++|. ++...-..|..++.|++|.++.|.. .+|.. +...+.|.+|+..
T Consensus 311 rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~ 371 (419)
T KOG2120|consen 311 RCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVF 371 (419)
T ss_pred hCCceeeeccccccccCchHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcceEEEEec
Confidence 34555566665543 2221122345556666666665542 34443 4556667777654
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.9e-07 Score=82.02 Aligned_cols=104 Identities=23% Similarity=0.307 Sum_probs=68.6
Q ss_pred CcEEECCCCcCcccCCcc---ccCCCCCCEEEccCCcCCccCCcccc-CCCCCcEEeCCCCCCCCCCchhhcCCCcceEE
Q 002186 103 LVDLNLSHNSFSGQFPVE---IFNLTSLISLDISRNNFSGHFPGGIQ-SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~---~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L 178 (955)
+-.+||+++.+- .+++. +.....|+..+|++|.|. .+|..|. ..+.+++|+|++|.++ .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 445677776664 23333 344555666677777776 3444443 3457777777777777 577777777788888
Q ss_pred EecCCCCcccCCCCcCCCCCCcEEEccCCCCC
Q 002186 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN 210 (955)
Q Consensus 179 ~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 210 (955)
+++.|.+. ..|..|..|.+|..|+..+|.+.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 88877776 45666666777777777777664
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 955 | ||||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 5e-52 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 2e-18 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 6e-52 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 2e-18 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 3e-30 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 4e-30 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 3e-19 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 4e-18 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 3e-16 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 3e-16 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 4e-16 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 5e-14 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 8e-14 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 8e-14 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 3e-13 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 2e-12 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 2e-12 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 2e-12 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 3e-12 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-12 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-12 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 7e-12 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-12 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-12 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-11 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-11 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-11 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-11 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 2e-11 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 2e-11 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 2e-11 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 3e-11 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 3e-11 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-11 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 3e-11 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 3e-11 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 3e-11 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 5e-11 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 5e-11 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 5e-11 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 2e-10 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 2e-10 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 4e-10 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 1e-09 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 2e-09 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 4e-09 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 6e-09 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 6e-09 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 7e-09 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 7e-09 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 7e-09 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 7e-09 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 7e-09 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 7e-09 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 7e-09 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 7e-09 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 8e-09 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 8e-09 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 9e-09 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 9e-09 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 9e-09 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 9e-09 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 9e-09 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 9e-09 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 9e-09 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 9e-09 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 9e-09 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 9e-09 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 9e-09 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 1e-08 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 1e-08 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 1e-08 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 1e-08 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 1e-08 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 1e-08 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 1e-08 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-08 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-08 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-08 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 4e-08 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 4e-08 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 9e-08 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 1e-07 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 1e-07 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-07 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 2e-07 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 2e-07 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 2e-07 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 2e-07 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 2e-07 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 3e-07 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 3e-07 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 3e-07 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 3e-07 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 4e-07 | ||
| 2omx_A | 462 | Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX | 4e-07 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 4e-07 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 5e-07 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 5e-07 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 5e-07 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 6e-07 | ||
| 3m18_A | 251 | Crystal Structure Of Variable Lymphocyte Receptor V | 6e-07 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 6e-07 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 7e-07 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 7e-07 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 7e-07 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 7e-07 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 9e-07 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 9e-07 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 9e-07 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 1e-06 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 1e-06 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-06 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 1e-06 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 1e-06 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-06 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 1e-06 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-06 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 1e-06 | ||
| 2o6q_A | 270 | Structural Diversity Of The Hagfish Variable Lympho | 1e-06 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 1e-06 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 1e-06 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-06 | ||
| 3m19_A | 251 | Crystal Structure Of Variable Lymphocyte Receptor V | 2e-06 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 2e-06 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 2e-06 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 2e-06 | ||
| 2wfh_A | 193 | The Human Slit 2 Dimerization Domain D4 Length = 19 | 2e-06 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 2e-06 | ||
| 2omt_A | 462 | Crystal Structure Of Inla G194s+sHEC1 COMPLEX Lengt | 2e-06 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 2e-06 | ||
| 3kj4_A | 286 | Structure Of Rat Nogo Receptor Bound To 1d9 Antagon | 2e-06 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-06 | ||
| 1o6s_A | 466 | Internalin (Listeria Monocytogenes) E-Cadherin (Hum | 2e-06 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-06 | ||
| 2omy_A | 461 | Crystal Structure Of Inla S192n/hec1 Complex Length | 3e-06 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 3e-06 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 4e-06 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 4e-06 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 4e-06 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 7e-06 | ||
| 3b2d_A | 603 | Crystal Structure Of Human Rp105MD-1 Complex Length | 7e-06 | ||
| 2omz_A | 466 | Crystal Structure Of Inla Y369a/hec1 Complex Length | 8e-06 | ||
| 2omu_A | 462 | Crystal Structure Of Inla G194s+s Y369s/hec1 Comple | 8e-06 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 8e-06 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 1e-05 | ||
| 2buj_A | 317 | Crystal Structure Of The Human Serine-Threonine Kin | 1e-05 | ||
| 2omv_A | 461 | Crystal Structure Of Inla S192n Y369s/hec1 Complex | 1e-05 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 1e-05 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 1e-05 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-05 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 1e-05 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 1e-05 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 1e-05 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 1e-05 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 1e-05 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-05 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 2e-05 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-05 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 2e-05 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-05 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-05 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-05 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 2e-05 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 3e-05 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 3e-05 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 3e-05 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 3e-05 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 3e-05 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 3e-05 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 3e-05 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-05 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-05 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 4e-05 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 4e-05 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 4e-05 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 4e-05 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 4e-05 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 4e-05 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 5e-05 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 5e-05 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 5e-05 | ||
| 1p8t_A | 285 | Crystal Structure Of Nogo-66 Receptor Length = 285 | 5e-05 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 5e-05 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 6e-05 | ||
| 2z63_A | 570 | Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 A | 6e-05 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 6e-05 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 6e-05 | ||
| 1ozn_A | 285 | 1.5a Crystal Structure Of The Nogo Receptor Ligand | 6e-05 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 6e-05 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 6e-05 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 6e-05 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 6e-05 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 6e-05 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 6e-05 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 6e-05 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 6e-05 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 6e-05 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 6e-05 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 7e-05 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 7e-05 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 1e-04 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 1e-04 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-04 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 1e-04 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 2e-04 | ||
| 3rfj_A | 279 | Design Of A Binding Scaffold Based On Variable Lymp | 2e-04 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 2e-04 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 2e-04 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 2e-04 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 2e-04 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 2e-04 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 2e-04 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 2e-04 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 2e-04 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 2e-04 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 2e-04 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 2e-04 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 2e-04 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 3e-04 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 3e-04 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 3e-04 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 3e-04 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 4e-04 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 4e-04 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 4e-04 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 4e-04 | ||
| 3t6q_A | 606 | Crystal Structure Of Mouse Rp105MD-1 Complex Length | 4e-04 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 4e-04 | ||
| 3rfs_A | 272 | Design Of A Binding Scaffold Based On Variable Lymp | 5e-04 | ||
| 3g3a_A | 178 | Structure Of A Lamprey Variable Lymphocyte Receptor | 5e-04 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 5e-04 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 5e-04 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 6e-04 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 6e-04 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 7e-04 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 7e-04 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 7e-04 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 7e-04 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 7e-04 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 7e-04 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 8e-04 | ||
| 1m0z_A | 290 | Crystal Structure Of The Von Willebrand Factor Bind | 9e-04 |
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor Vlra.R2.1 In Complex With Hen Egg Lysozyme Length = 251 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors A29 Length = 270 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor Vlra.R5.1 Length = 251 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4 Length = 193 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist Antibody Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human) Recognition Complex Length = 466 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex Length = 603 | Back alignment and structure |
|
| >pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex Length = 466 | Back alignment and structure |
|
| >pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex Length = 462 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317 | Back alignment and structure |
|
| >pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor Length = 285 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And Hagfish Vlrb.61 Length = 570 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding Domain Reveals A Convergent Recognition Scaffold Mediating Inhibition Of Myelination Length = 285 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte Receptors Of Jawless Vertebrates By Module Engineering Length = 279 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex Length = 606 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte Receptors Of Jawless Vertebrates By Module Engineering Length = 272 | Back alignment and structure |
|
| >pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In Complex With A Protein Antigen Length = 178 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding Domain Of Glycoprotein Ib Alpha Length = 290 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 509 bits (1314), Expect = e-168
Identities = 170/558 (30%), Positives = 269/558 (48%), Gaps = 20/558 (3%)
Query: 80 INLSMKGLSGALPGKPLRIFFN--ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNF 137
+++S S +P + L L++S N SG F I T L L+IS N F
Sbjct: 205 LDVSSNNFSTGIPF-----LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259
Query: 138 SGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEIS-QLEHLKVLNLAGSYFSGPIPSQFGSF 196
G P L++L L N F+G +P +S + L L+L+G++F G +P FGS
Sbjct: 260 VGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317
Query: 197 KSLEFLHLAGNLLNDQIPAE-LGMLKTVTHMEIGYNFYQGNIPWQLGNMS-EVQYLDIAG 254
LE L L+ N + ++P + L ++ + +++ +N + G +P L N+S + LD++
Sbjct: 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSS 377
Query: 255 ANLSGSIPKELSN--LTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPES 312
N SG I L L+ L+L N G++P S + L SL LS N LSG IP S
Sbjct: 378 NNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSS 437
Query: 313 FADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDV 372
L LR L L N + G +P+ L+ + +LE L + N +G +P L + L W+ +
Sbjct: 438 LGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISL 497
Query: 373 STNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLK 432
S N G IP I L L L +N+F+G++ L +C SL+ L L N F+G IP
Sbjct: 498 SNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557
Query: 433 FSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNP-KLGGMIPAQTWSLPSLQNF 491
+ ++ N G I + + + N + G+ Q L +
Sbjct: 558 MFKQS----GKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC 613
Query: 492 SASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIP 550
+ ++ G+ P F + S+ ++ N LSG IP+ + + L ++L +N + GSIP
Sbjct: 614 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673
Query: 551 EVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSA 610
+ + L L +LDLS N L G+IP + + LT +++S N++SG IP +
Sbjct: 674 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAK 733
Query: 611 YAGNPKLCGAPLQPCHAS 628
+ NP LCG PL C S
Sbjct: 734 FLNNPGLCGYPLPRCDPS 751
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 450 bits (1160), Expect = e-145
Identities = 184/585 (31%), Positives = 277/585 (47%), Gaps = 53/585 (9%)
Query: 28 SEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGL 87
L+S K L D N L DW NP C++ GV C + V I+LS K L
Sbjct: 14 IHQLISFKDVLPDK-NLLPDWS--SNKNP------CTFDGVTCR--DDKVTSIDLSSKPL 62
Query: 88 SGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQS 147
+ + +LT L SL +S ++ +G G +
Sbjct: 63 NVGF-----------------------SAVSSSLLSLTGLESLFLSNSHINGSVS-GFKC 98
Query: 148 LRNLLVLDAFSNSFSGSVPA--EISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHL 204
+L LD NS SG V + LK LN++ + P S SLE L L
Sbjct: 99 SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDL 158
Query: 205 AGNLLNDQIPAEL---GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261
+ N ++ + H+ I N G++ + +++LD++ N S I
Sbjct: 159 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGI 216
Query: 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRL 321
P L + + L+ L + N+L+G S T LK L++S N+ GPIP LK+L+
Sbjct: 217 P-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQY 273
Query: 322 LSLMYNEMSGTVPESLV-QLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGS 380
LSL N+ +G +P+ L +L L + N+F G++P G S L + +S+NNF+G
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 381 IPPD-ICSGGVLFKLILFSNNFTGSLSPSLSNCS-SLVRLRLEDNSFSGEIP--LKFSQL 436
+P D + L L L N F+G L SL+N S SL+ L L N+FSG I L +
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393
Query: 437 PDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASAC 496
+ + L NGFTG IP ++ S+L ++S N L G IP+ SL L++
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN-YLSGTIPSSLGSLSKLRDLKLWLN 452
Query: 497 NITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLAR 555
+ G +P K++ + N+L+G IP +SNC L I L+NN+L G IP+ + R
Sbjct: 453 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 512
Query: 556 LPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG 600
L L +L LS+NS SG IPA+ G C SL L+++ N +G+IP+
Sbjct: 513 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 6e-17
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 31/138 (22%)
Query: 72 KNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLD 131
NN ++ L++S+N SG P EI ++ L L+
Sbjct: 629 DNNGSMMF--------------------------LDMSYNMLSGYIPKEIGSMPYLFILN 662
Query: 132 ISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPS 191
+ N+ SG P + LR L +LD SN G +P +S L L ++L+ + SGPIP
Sbjct: 663 LGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
Query: 192 --QFGSFKSLEFLHLAGN 207
QF +F +F N
Sbjct: 723 MGQFETFPPAKF---LNN 737
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 312 bits (801), Expect = 7e-95
Identities = 89/616 (14%), Positives = 182/616 (29%), Gaps = 72/616 (11%)
Query: 29 EALLSLKSELVDDFNSLHDWF-----VPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLS 83
LS +E + D+ +L + + G +W+ K G++L+
Sbjct: 19 PIKLSRTAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLN 78
Query: 84 MKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG---- 139
G + L+L SG+ P I LT L L + +
Sbjct: 79 SNG---------------RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERL 123
Query: 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE--HLKVLNLAGSYFSGPIPSQFGSFK 197
P GI + + + + + + L + I
Sbjct: 124 FGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183
Query: 198 SLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257
+ N + + + L + +G + + + +Y
Sbjct: 184 KDTQIGQLSNNIT-FVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYA-----QQ 237
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL--------SGPI 309
+ + NL L + ++ ++P + ++ ++++ NR
Sbjct: 238 YKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQA 297
Query: 310 PESFADLKNLRLLSLMYNEM-SGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLR 368
+ ++++ + YN + + V SL ++ L +L N G LP G KL
Sbjct: 298 LADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPA-FGSEIKLA 356
Query: 369 WVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTG-SLSPSLSNCSSLVRLRLEDNSFS 426
++++ N IP + C + L N + S + + N
Sbjct: 357 SLNLAYNQITE-IPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIG 415
Query: 427 GEIPLKFSQLPD-------INYIDLSRNGFTGGIPTDINQASKLEYFNVSNN------PK 473
F L ++ I+LS N + + S L N+ N
Sbjct: 416 SVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKN 475
Query: 474 LGGMIPAQTWSLPSLQNFSASACNITGNLPP---FKSCKSISVIESHMNNLSGTIPESVS 530
+ L + +T L + + I+ N+ S P
Sbjct: 476 SLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPL 533
Query: 531 NCVELERIDL------ANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLT 584
N L+ + N+ + PE + P L L + N + + K +++
Sbjct: 534 NSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK-VNEKI--TPNIS 590
Query: 585 VLNVSFNDISGSIPSG 600
VL++ N S
Sbjct: 591 VLDIKDNPNISIDLSY 606
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 225 bits (575), Expect = 3e-63
Identities = 70/518 (13%), Positives = 146/518 (28%), Gaps = 115/518 (22%)
Query: 98 IFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAF 157
+ N + ++ NL L +++ P +++L + +++
Sbjct: 222 NICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVA 281
Query: 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAEL 217
N + + ++ +++ N
Sbjct: 282 CNRGIS----------------GEQLKDDWQALADAPVGEKIQIIYIGYN---------- 315
Query: 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLF 277
N + L M ++ L+ L G +P + KL SL L
Sbjct: 316 -------------NLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLA 361
Query: 278 RNQLAGQVPWEFSRVTTLKSLDLSDNRLSG-PIPESFADLKNLRLLSLMYNEMSG----- 331
NQ+ +++L + N+L P + + + YNE+
Sbjct: 362 YNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKN 421
Query: 332 --TVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGG 389
+ + + ++ + + NN S E S L +++ N
Sbjct: 422 FDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTE---------- 471
Query: 390 VLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIP--LKFSQLPDINYIDLSRN 447
N + + N L + L N + + + + LP + IDLS N
Sbjct: 472 -------IPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYN 523
Query: 448 GFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKS 507
F+ PT +S L+ F + N G
Sbjct: 524 SFS-KFPTQPLNSSTLKGFGIRNQRDAQG------------------------------- 551
Query: 508 CKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHN 567
N PE ++ C L ++ + +N + + E + P + VLD+ N
Sbjct: 552 -----------NRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKI--TPNISVLDIKDN 597
Query: 568 SLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRL 605
+ + + ++ I L +
Sbjct: 598 PNISIDLSYVCPYIEAGMYMLFYDKTQ-DIRGCDALDI 634
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 2e-09
Identities = 18/133 (13%), Positives = 35/133 (26%), Gaps = 11/133 (8%)
Query: 482 TWSLPSLQNFSASACNITGNLPPFKSCKSISVIES---HMNNLSGTIPESVSNCVELERI 538
+ NF+ P S S + SG +P+++ ELE +
Sbjct: 53 GTQPGANWNFNKELDMWGAQ--PGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVL 110
Query: 539 DLANNKLIG----SIPEVLARLPVLGVLDLSHNSLSGQIPAKFG--SCSSLTVLNVSFND 592
L ++ P+ ++ S L ++ +
Sbjct: 111 ALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDP 170
Query: 593 ISGSIPSGKVLRL 605
SI + L
Sbjct: 171 QQKSIKKSSRITL 183
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 293 bits (752), Expect = 2e-87
Identities = 113/541 (20%), Positives = 201/541 (37%), Gaps = 39/541 (7%)
Query: 69 KCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLI 128
KC ++ + + S L+ +P + LNL+HN + L
Sbjct: 1 KCTVSHEVA---DCSHLKLT-QVP----DDLPTNITVLNLTHNQLRRLPAANFTRYSQLT 52
Query: 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP 188
SLD+ N S P Q L L VL+ N S + +L L+L +
Sbjct: 53 SLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKI 112
Query: 189 IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPW--QLGNMSE 246
+ F K+L L L+ N L+ L+ + + + N Q + S
Sbjct: 113 KNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSS 172
Query: 247 VQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFS---RVTTLKSLDLSDN 303
++ L+++ + P + +L LFL QL + + T++++L LS++
Sbjct: 173 LKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNS 232
Query: 304 RLSGPIPESFADLK--NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL 361
+LS +F LK NL +L L YN ++ +S LP LE F+ N +L
Sbjct: 233 QLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSL 292
Query: 362 GRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLE 421
+R++++ + K + + S L L +E
Sbjct: 293 HGLFNVRYLNLKRS---------------FTKQSISLASLPKIDDFSFQWLKCLEHLNME 337
Query: 422 DNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDIN----QASKLEYFNVSNNPKLGGM 477
DN G F+ L ++ Y+ LS + + T+ S L N++ N K+ +
Sbjct: 338 DNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKN-KISKI 396
Query: 478 IPAQTWSLPSLQNFSASACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESVSNCVEL 535
L L+ I L ++ ++I I N S + L
Sbjct: 397 ESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSL 456
Query: 536 ERIDLANNKL--IGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDI 593
+R+ L L + S P L L +LDLS+N+++ L +L++ N++
Sbjct: 457 QRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNL 516
Query: 594 S 594
+
Sbjct: 517 A 517
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 280 bits (718), Expect = 1e-82
Identities = 105/535 (19%), Positives = 180/535 (33%), Gaps = 34/535 (6%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
L +L+L NS +LI+LD+S N S G L NL L +N
Sbjct: 99 LTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQ 158
Query: 163 GSVPAEIS--QLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGML 220
E+ LK L L+ + P F + L L L L + +L +
Sbjct: 159 ALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLE 218
Query: 221 KTVTHME---IGYNFYQGNIPWQLGNM--SEVQYLDIAGANLSGSIPKELSNLTKLESLF 275
T + + + + + + LD++ NL+ + L +LE F
Sbjct: 219 LANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFF 278
Query: 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDN---------RLSGPIPESFADLKNLRLLSLMY 326
L N + + ++ L+L + L SF LK L L++
Sbjct: 279 LEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMED 338
Query: 327 NEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG----RNSKLRWVDVSTNNFNGSIP 382
N++ G L +L+ L + N++ S N +S L ++++ N +
Sbjct: 339 NDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIES 398
Query: 383 PDICSGGVLFKLILFSNNFTGSLSPS-LSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINY 441
G L L L N L+ ++ + L N + F+ +P +
Sbjct: 399 DAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQR 458
Query: 442 IDLSRNGFTG--GIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNIT 499
+ L R P+ L ++SNN + + L L+ N+
Sbjct: 459 LMLRRVALKNVDSSPSPFQPLRNLTILDLSNN-NIANINDDMLEGLEKLEILDLQHNNLA 517
Query: 500 ---------GNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIP 550
G + K + ++ N E + EL+ IDL N L
Sbjct: 518 RLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPA 577
Query: 551 EVLARLPVLGVLDLSHNSLSGQIPAKFG-SCSSLTVLNVSFNDISGSIPSGKVLR 604
V L L+L N ++ FG + +LT L++ FN + S
Sbjct: 578 SVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFV 632
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 249 bits (637), Expect = 2e-71
Identities = 88/494 (17%), Positives = 159/494 (32%), Gaps = 52/494 (10%)
Query: 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184
S D S + P + N+ VL+ N A ++ L L++ +
Sbjct: 4 VSHEVADCSHLKLT-QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNT 60
Query: 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNM 244
S P L+ L+L N L+
Sbjct: 61 ISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFA------------------------FC 96
Query: 245 SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304
+ + L + ++ L +L L N L+ ++ L+ L LS+N+
Sbjct: 97 TNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNK 156
Query: 305 LSGPIPESFADLKN--LRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362
+ E N L+ L L N++ P + L LF+ N SL E L
Sbjct: 157 IQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLC 216
Query: 363 ---RNSKLRWVDVSTNNFNGSIPPDI--CSGGVLFKLILFSNNFTGSLSPSLSNCSSLVR 417
N+ +R + +S + + + L L L NN + S + L
Sbjct: 217 LELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEY 276
Query: 418 LRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGI---------PTDINQASKLEYFNV 468
LE N+ L ++ Y++L R+ I LE+ N+
Sbjct: 277 FFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNM 336
Query: 469 SNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIE------SHMNNLS 522
+N + G+ L +L+ S S + ++ S++ + N +S
Sbjct: 337 EDN-DIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTK-NKIS 394
Query: 523 GTIPESVSNCVELERIDLANNKLIGSIP-EVLARLPVLGVLDLSHNSLSGQIPAKFGSCS 581
++ S LE +DL N++ + + L + + LS+N F
Sbjct: 395 KIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVP 454
Query: 582 SLTVLNVSFNDISG 595
SL L + +
Sbjct: 455 SLQRLMLRRVALKN 468
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 230 bits (588), Expect = 1e-64
Identities = 96/424 (22%), Positives = 164/424 (38%), Gaps = 25/424 (5%)
Query: 198 SLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257
S E + L Q+P +L +T + + +N + S++ LD+ +
Sbjct: 5 SHEVADCSHLKL-TQVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI 61
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317
S P+ L L+ L L N+L+ F+ T L L L N + F K
Sbjct: 62 SKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQK 121
Query: 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG--RNSKLRWVDVSTN 375
NL L L +N +S T + VQL +L+ L + NN E L NS L+ +++S+N
Sbjct: 122 NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181
Query: 376 NFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLS---NCSSLVRLRLEDNSFSGEIPLK 432
P + G LF L L + SL+ L +S+ L L ++ S
Sbjct: 182 QIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 241
Query: 433 FSQLPDIN--YIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQ- 489
F L N +DLS N +LEYF + N + + L +++
Sbjct: 242 FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYN-NIQHLFSHSLHGLFNVRY 300
Query: 490 --------NFSASACNITGNLP-PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDL 540
S S ++ F+ K + + N++ G + + L+ + L
Sbjct: 301 LNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSL 360
Query: 541 ANNKL-IGSIP-EVLARLPV--LGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGS 596
+N+ + ++ E L L +L+L+ N +S F L VL++ N+I
Sbjct: 361 SNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQE 420
Query: 597 IPSG 600
+
Sbjct: 421 LTGQ 424
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 225 bits (576), Expect = 5e-63
Identities = 78/512 (15%), Positives = 173/512 (33%), Gaps = 58/512 (11%)
Query: 91 LPGKPLRIFFN-ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQ--- 146
L + L IF N L L LS N P + L L ++ +
Sbjct: 160 LKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLEL 219
Query: 147 SLRNLLVLDAFSNSFSGSVPAEISQLE--HLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 204
+ ++ L ++ S + L+ +L +L+L+ + + F LE+ L
Sbjct: 220 ANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFL 279
Query: 205 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI---------PWQLGNMSEVQYLDIAGA 255
N + L L V ++ + +F + +I + + +++L++
Sbjct: 280 EYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDN 339
Query: 256 NLSGSIPKELSNLTKLESLFLFRNQLAGQVP----WEFSRVTTLKSLDLSDNRLSGPIPE 311
++ G + L L+ L L + + + + + L L+L+ N++S +
Sbjct: 340 DIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESD 399
Query: 312 SFADLKNLRLLSLMYNEMSGTVP-ESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWV 370
+F+ L +L +L L NE+ + + L ++ +++ N + + L+ +
Sbjct: 400 AFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRL 459
Query: 371 DVSTNNFNG--SIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFS-- 426
+ S P L L L +NN L L L L+ N+ +
Sbjct: 460 MLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARL 519
Query: 427 ------GEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPA 480
G L ++ ++L NGF +L+ ++ N L + +
Sbjct: 520 WKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLN-NLNTLPAS 578
Query: 481 QTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVS-NCVELERID 539
+ SL++ + N ++ + L +D
Sbjct: 579 VFNNQVSLKSLNLQK-----------------------NLITSVEKKVFGPAFRNLTELD 615
Query: 540 LANNKLIGSIPEVLARLPVLGVLDLSHNSLSG 571
+ N + + + ++ +H ++
Sbjct: 616 MRFNPFDCTCESI---AWFVNWINETHTNIPE 644
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 5e-48
Identities = 71/364 (19%), Positives = 125/364 (34%), Gaps = 48/364 (13%)
Query: 248 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307
+ D + L+ +P +L T + L L NQL F+R + L SLD+ N +S
Sbjct: 7 EVADCSHLKLT-QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISK 63
Query: 308 PIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKL 367
PE L L++L+L +NE+S ++ +L L + +N + L
Sbjct: 64 LEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNL 123
Query: 368 RWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLS--NCSSLVRLRLEDNSF 425
+D+S N + + L +L+L +N S L SSL +L L N
Sbjct: 124 ITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183
Query: 426 SGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSL 485
P F + + + L+ + + +
Sbjct: 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKL----------------------CLELAN 221
Query: 486 PSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKL 545
S++N S S ++ + L T L +DL+ N L
Sbjct: 222 TSIRNLSLSNSQLST------------TSNTTFLGLKWT---------NLTMLDLSYNNL 260
Query: 546 IGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRL 605
+ A LP L L +N++ ++ LN+ + SI + ++
Sbjct: 261 NVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKI 320
Query: 606 MGSS 609
S
Sbjct: 321 DDFS 324
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 4e-39
Identities = 56/291 (19%), Positives = 105/291 (36%), Gaps = 19/291 (6%)
Query: 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGG-IQSLRNLLVLDAFSN 159
+ L LNL+ N S L L LD+ N G + L N+ + N
Sbjct: 381 SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYN 440
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSG--PIPSQFGSFKSLEFLHLAGNLLNDQIPAEL 217
+ + + L+ L L PS F ++L L L+ N + + L
Sbjct: 441 KYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDML 500
Query: 218 GMLKTVTHMEIGYN--------FYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLT 269
L+ + +++ +N G + L +S + L++ + +L
Sbjct: 501 EGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLF 560
Query: 270 KLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFAD-LKNLRLLSLMYNE 328
+L+ + L N L F+ +LKSL+L N ++ + F +NL L + +N
Sbjct: 561 ELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNP 620
Query: 329 MSGTVPE-----SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVST 374
T + + I + ++Y + P + +R D S+
Sbjct: 621 FDCTCESIAWFVNWINETHTNIPELSSHYLCNT-PPHY-HGFPVRLFDTSS 669
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 273 bits (700), Expect = 8e-81
Identities = 103/521 (19%), Positives = 182/521 (34%), Gaps = 31/521 (5%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
F EL L+LS +L+ L +L ++ N G L +L L A
Sbjct: 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYF-SGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
+ + I L+ LK LN+A + S +P F + +LE L L+ N + +L
Sbjct: 111 NLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 170
Query: 219 MLK----TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLES 273
+L +++ N P + + L + S ++ K + L LE
Sbjct: 171 VLHQMPLLNLSLDLSLNPMNFIQPGAFKEIR-LHKLTLRNNFDSLNVMKTCIQGLAGLEV 229
Query: 274 LFLFRNQLAGQVPWE---FSRVTTLKSLDLSDNRLS------GPIPESFADLKNLRLLSL 324
L + + E S + L +L + + RL+ I + F L N+ SL
Sbjct: 230 HRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSL 289
Query: 325 MYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD 384
+ + S + L + N F L +L + + G
Sbjct: 290 VSVTIERVKDFS--YNFGWQHLELVNCKFGQFPTLKLKSLKRLTF-----TSNKGGNAFS 342
Query: 385 ICSGGVLFKLILFSN--NFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYI 442
L L L N +F G S S +SL L L N + F L + ++
Sbjct: 343 EVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHL 401
Query: 443 DLSRNGFTGGIPTDI-NQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN 501
D + + L Y ++S+ L SL+ + + N
Sbjct: 402 DFQHSNLKQMSEFSVFLSLRNLIYLDISHT-HTRVAFNGIFNGLSSLEVLKMAGNSFQEN 460
Query: 502 LPP--FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVL 559
P F ++++ ++ L P + ++ L+ +++++N L L
Sbjct: 461 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 520
Query: 560 GVLDLSHNSLSGQIPAKFGSC-SSLTVLNVSFNDISGSIPS 599
VLD S N + + SSL LN++ ND + +
Sbjct: 521 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 561
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 268 bits (688), Expect = 3e-79
Identities = 106/524 (20%), Positives = 178/524 (33%), Gaps = 53/524 (10%)
Query: 95 PLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154
P + F+ +L+LS N F+ L LD+SR G QSL +L L
Sbjct: 23 PDNLPFS-TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTL 81
Query: 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214
N S L L+ L + + G K+L+ L++A NL+
Sbjct: 82 ILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS--- 138
Query: 215 AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLE-- 272
+P N++ +++LD++ + +L L ++
Sbjct: 139 --------------------FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178
Query: 273 --SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPE-SFADLKNLRLLSLMYNEM 329
SL L N + P F L L L +N S + + L L + L+ E
Sbjct: 179 NLSLDLSLNPMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEF 237
Query: 330 SGTVP---------ESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGS 380
E L L E + +Y+ + + + + + +
Sbjct: 238 RNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERV 297
Query: 381 IPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDIN 440
G L L + F + L + L S G LP +
Sbjct: 298 KDFSYNFG--WQHLELVNCKFGQFPTLKLKSLKRLTF-----TSNKGGNAFSEVDLPSLE 350
Query: 441 YIDLSRNG--FTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNI 498
++DLSRNG F G + L+Y ++S N + + + L L++ N+
Sbjct: 351 FLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFN-GVIT-MSSNFLGLEQLEHLDFQHSNL 408
Query: 499 TGNLPP--FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSI-PEVLAR 555
F S +++ ++ + + LE + +A N + P++
Sbjct: 409 KQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE 468
Query: 556 LPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPS 599
L L LDLS L P F S SSL VLN+S N+
Sbjct: 469 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF 512
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 232 bits (594), Expect = 4e-66
Identities = 95/512 (18%), Positives = 155/512 (30%), Gaps = 78/512 (15%)
Query: 107 NLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP 166
+F + P + S +LD+S N S L VLD
Sbjct: 13 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIED 69
Query: 167 AEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHM 226
L HL L L G+ F SL+ L L +G LKT+ +
Sbjct: 70 GAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKEL 129
Query: 227 EIGYN-FYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLE----SLFLFRNQL 281
+ +N +P N++ +++LD++ + +L L ++ SL L N +
Sbjct: 130 NVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 189
Query: 282 AGQVPWEFSRVTTLKSLDLSDNRLSGPIPE-SFADLKNLRLLSLMYNEMSGTVP------ 334
P F L L L +N S + + L L + L+ E
Sbjct: 190 NFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDK 248
Query: 335 ---ESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVL 391
E L L E + +Y+ + + + + + + G
Sbjct: 249 SALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFG--W 306
Query: 392 FKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNG--F 449
L L + F + L + L S G LP + ++DLSRNG F
Sbjct: 307 QHLELVNCKFGQFPTLKLKSLKRLTF-----TSNKGGNAFSEVDLPSLEFLDLSRNGLSF 361
Query: 450 TGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCK 509
G + L+Y ++S N +
Sbjct: 362 KGCCSQSDFGTTSLKYLDLSFN-------------------------GVI---------- 386
Query: 510 SISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIP-EVLARLPVLGVLDLSHNS 568
T+ + +LE +D ++ L V L L LD+SH
Sbjct: 387 --------------TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 432
Query: 569 LSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG 600
F SSL VL ++ N +
Sbjct: 433 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPD 464
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 231 bits (591), Expect = 1e-65
Identities = 96/521 (18%), Positives = 170/521 (32%), Gaps = 59/521 (11%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNF-SGHFPGGIQSLRNLLVLDAFSNSF 161
L L + + I +L +L L+++ N S P +L NL LD SN
Sbjct: 102 LQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
Query: 162 SGSVPAEISQLEHLKV----LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAEL 217
++ L + + L+L+ + + P F L L L N + +
Sbjct: 162 QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTC 220
Query: 218 GMLKTVTHMEI---------GYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS---IPKEL 265
++ + +E+ + L + + + A L I
Sbjct: 221 --IQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLF 278
Query: 266 SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325
+ LT + S L + +FS + L+L + + LK L S
Sbjct: 279 NCLTNVSSFSLVSVTIER--VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSN- 335
Query: 326 YNEMSGTVPESLVQLPSLEILFIWNN--YFSGSLPENLGRNSKLRWVDVSTNNFNGSIPP 383
G S V LPSLE L + N F G ++ + L+++D+S N +
Sbjct: 336 ----KGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSS 390
Query: 384 DICSGGVLFKLILFSNNFTGSLSPS-LSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYI 442
+ L L +N S + +L+ L + F+ L + +
Sbjct: 391 NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450
Query: 443 DLSRNGFTGGIPTDI-NQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN 501
++ N F DI + L + ++S +L + P SL SLQ + S
Sbjct: 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQC-QLEQLSPTAFNSLSSLQVLNMSH------ 503
Query: 502 LPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPV-LG 560
NN L+ +D + N ++ S + L P L
Sbjct: 504 -----------------NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLA 546
Query: 561 VLDLSHNSLSGQIPAK--FGSCSSLTVLNVSFNDISGSIPS 599
L+L+ N + + L V + + PS
Sbjct: 547 FLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 587
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 210 bits (537), Expect = 2e-58
Identities = 95/486 (19%), Positives = 177/486 (36%), Gaps = 34/486 (6%)
Query: 103 LVDLNLSHNSF-SGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNL----LVLDAF 157
L +LN++HN S + P NLT+L LD+S N + ++ L + L LD
Sbjct: 126 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 185
Query: 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQI--- 213
N + P ++ L L L ++ S + LE L ++
Sbjct: 186 LNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 244
Query: 214 PAELGMLKTVTHMEIGYN------FYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSN 267
+ L+ + ++ I +Y +I ++ V + + S
Sbjct: 245 KFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSY 302
Query: 268 LTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327
+ L L + + +LK L + N+ S DL +L L L N
Sbjct: 303 NFGWQHLELVNCKFGQFPTLKLK---SLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRN 357
Query: 328 EMS--GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDI 385
+S G +S SL+ L + N + N +L +D +N +
Sbjct: 358 GLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSV 416
Query: 386 CSGGV-LFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEI-PLKFSQLPDINYID 443
L L + + + + + SSL L++ NSF P F++L ++ ++D
Sbjct: 417 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476
Query: 444 LSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLP 503
LS+ PT N S L+ N+S+N + L SLQ S +I +
Sbjct: 477 LSQCQLEQLSPTAFNSLSSLQVLNMSHN-NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKK 535
Query: 504 P--FKSCKSISVIESHMNNLSGTIPES--VSNCVELERIDLANNKLIGSIPEVLARLPVL 559
S++ + N+ + T + + ++ + ++ + P +PVL
Sbjct: 536 QELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMPVL 595
Query: 560 GVLDLS 565
L+++
Sbjct: 596 -SLNIT 600
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 8e-45
Identities = 70/393 (17%), Positives = 121/393 (30%), Gaps = 25/393 (6%)
Query: 80 INLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFN---LTSLISLDISRNN 136
+ L S + ++ L L F + +E F+ L L +L I
Sbjct: 205 LTLRNNFDSLNVMKTCIQGLAG-LEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFR 263
Query: 137 FS------GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIP 190
+ L N+ S + S + L L F
Sbjct: 264 LAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCKFGQFPT 321
Query: 191 SQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNF--YQGNIPWQLGNMSEVQ 248
+ S K L F G L ++ +++ N ++G + ++
Sbjct: 322 LKLKSLKRLTFTSNKGG-----NAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLK 376
Query: 249 YLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSG 307
YLD++ + + L +LE L + L + F + L LD+S
Sbjct: 377 YLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 435
Query: 308 PIPESFADLKNLRLLSLMYNEMSGTV-PESLVQLPSLEILFIWNNYFSGSLPENLGRNSK 366
F L +L +L + N P+ +L +L L + P S
Sbjct: 436 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 495
Query: 367 LRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNC-SSLVRLRLEDNSF 425
L+ +++S NNF L L N+ S L + SSL L L N F
Sbjct: 496 LQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 555
Query: 426 SGEIPLK--FSQLPDINYIDLSRNGFTGGIPTD 456
+ + + D + + P+D
Sbjct: 556 ACTCEHQSFLQWIKDQRQLLVEVERMECATPSD 588
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 265 bits (680), Expect = 7e-76
Identities = 87/673 (12%), Positives = 183/673 (27%), Gaps = 122/673 (18%)
Query: 16 VFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNT 75
+ + + +AL ++ L + + ++ +W+ K
Sbjct: 259 IQLKETAEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHS------LNWNFNKELDMWG 312
Query: 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN 135
G++L G + L+L+ G+ P I LT L L +
Sbjct: 313 DQPGVDLDNNG---------------RVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTH 357
Query: 136 NFSG--------HFPGGIQSLRNLLVLDAFSNSFSGSVPA---------------EISQL 172
+ + + R + + F E+ +
Sbjct: 358 SETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPI 417
Query: 173 EHLKVLNLAGSYFSG------PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHM 226
+ ++L + I L+ ++ A + A
Sbjct: 418 KKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWED-----A 472
Query: 227 EIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG--- 283
Y N N+ ++ +++ +P L +L +L+SL + N+
Sbjct: 473 NSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQ 532
Query: 284 ------QVPWEFSRVTTLKSLDLSDNRLSG-PIPESFADLKNLRLLSLMYNEMSGTVPES 336
++ + ++ + N L P S + L LL ++N++ E+
Sbjct: 533 LKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKV--RHLEA 590
Query: 337 LVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNFNGSIPPDICSGGVLFKLI 395
L L + N +PE+ ++ + S N IP
Sbjct: 591 FGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIF---------- 638
Query: 396 LFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDIN-----YIDLSRNGFT 450
+ + + + N E + D + LS N
Sbjct: 639 ------------NAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ 686
Query: 451 GGIPTDINQASKLEYFNVSNN------PKLGGMIPAQTWSLPSLQNFSASACNITGNLPP 504
S + +SNN + L +T L
Sbjct: 687 KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSD 745
Query: 505 ---FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDL------ANNKLIGSIPEVLAR 555
+ +S ++ N S + P N +L+ + N+++ P +
Sbjct: 746 DFRATTLPYLSNMDVSYNCFS-SFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITT 804
Query: 556 LPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSA----Y 611
P L L + N + + K L +L+++ N SI V + + Y
Sbjct: 805 CPSLIQLQIGSNDIRK-VDEKL--TPQLYILDIADNPNI-SIDVTSVCPYIEAGMYVLLY 860
Query: 612 AGNPKLCGAPLQP 624
+ G
Sbjct: 861 DKTQDIRGCDALG 873
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 9e-26
Identities = 47/410 (11%), Positives = 103/410 (25%), Gaps = 64/410 (15%)
Query: 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLF 277
+ + M++ Y + +Y+DI A ++ ++ + +
Sbjct: 168 RVTTELKGMKVTYKEDSKEHQNPDN--ANDKYMDIGVATCDSAVWLPAGTY-QVVAYTTY 224
Query: 278 RNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL 337
+ E V +S + DN+L+ + + E + + +
Sbjct: 225 SQSGIKRSELETQSVRG-ESFTVIDNKLTKD-----------ANVPIQLKETAEYIKDYK 272
Query: 338 VQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILF 397
E L N + N + NFN +
Sbjct: 273 ALKAIWEALDGKNWRYYSGTINNTIHSL--------NWNFNKEL---------------- 308
Query: 398 SNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDI 457
+ + L N + L L G +P QL ++ + + T
Sbjct: 309 -DMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFG 367
Query: 458 NQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN-----LPPFKSCKSIS 512
++ + + L I N +
Sbjct: 368 DEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKD 427
Query: 513 VIESHMNNLSGTIPESVSNCVELERIDLANNKL-------------------IGSIPEVL 553
++ N I +++ +L+ I AN+ +
Sbjct: 428 TQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSW 487
Query: 554 ARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVL 603
+ L L ++L + Q+P L LN++ N +
Sbjct: 488 SNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADW 537
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 248 bits (635), Expect = 3e-75
Identities = 95/374 (25%), Positives = 143/374 (38%), Gaps = 82/374 (21%)
Query: 260 SIPKELSNLTKLES----LFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG--PIPESF 313
I K+L N T L S G + ++ + +LDLS L PIP S
Sbjct: 13 QIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSL 72
Query: 314 ADLKNLRLLSLM-YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDV 372
A+L L L + N + G +P ++ +L L L+I + SG++P+ L + L +D
Sbjct: 73 ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDF 132
Query: 373 STNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLK 432
S N +G++PP S+S+ +LV + + N SG IP
Sbjct: 133 SYNALSGTLPP------------------------SISSLPNLVGITFDGNRISGAIPDS 168
Query: 433 FSQLPD-INYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNF 491
+ + +SRN TG IP + L + ++S N
Sbjct: 169 YGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN-------------------- 207
Query: 492 SASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPE 551
L G + ++I LA N L + +
Sbjct: 208 ----------------------------MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK 239
Query: 552 VLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSAY 611
+ L LDL +N + G +P L LNVSFN++ G IP G L+ SAY
Sbjct: 240 -VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAY 298
Query: 612 AGNPKLCGAPLQPC 625
A N LCG+PL C
Sbjct: 299 ANNKCLCGSPLPAC 312
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 239 bits (613), Expect = 6e-72
Identities = 83/328 (25%), Positives = 134/328 (40%), Gaps = 40/328 (12%)
Query: 29 EALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNK--NNTIVVGINLSMKG 86
+ALL +K +L + +L W P +W GV C+ V ++LS
Sbjct: 9 QALLQIKKDLGNP-TTLSSW------LPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLN 61
Query: 87 LSGALPGKPLRIF-FNELVDLNLSH-NSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGG 144
L P P + L L + N+ G P I LT L L I+ N SG P
Sbjct: 62 LPKPYP-IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDF 120
Query: 145 IQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL-EFLH 203
+ ++ L+ LD N+ SG++P IS L +L + G+ SG IP +GSF L +
Sbjct: 121 LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMT 180
Query: 204 LAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263
++ N L +IP L + ++D++ L G
Sbjct: 181 ISRNRLTGKIPPTFANLN-------------------------LAFVDLSRNMLEGDASV 215
Query: 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323
+ + + L +N LA + + L LDL +NR+ G +P+ LK L L+
Sbjct: 216 LFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 324 LMYNEMSGTVPESLVQLPSLEILFIWNN 351
+ +N + G +P+ L ++ NN
Sbjct: 275 VSFNNLCGEIPQGGN-LQRFDVSAYANN 301
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 249 bits (638), Expect = 3e-72
Identities = 88/508 (17%), Positives = 175/508 (34%), Gaps = 16/508 (3%)
Query: 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
L L+L+ + L +L ++ N + + L L
Sbjct: 58 NLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGI 117
Query: 162 SGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLK 221
S + + L+ L L ++ S + + L+ L N ++ ++ L+
Sbjct: 118 SSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQ 177
Query: 222 TVTHMEIGYNFYQ-GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSN--LTKLESLFLFR 278
T++ + N I + + Q L+ G I K L N + L
Sbjct: 178 QATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFED 237
Query: 279 NQLAGQVPWEFS--RVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336
P F +++S++L + +F L+ L L +S +P
Sbjct: 238 MDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSG 296
Query: 337 LVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-GVLFKLI 395
LV L +L+ L + N F + L + + N + L +L
Sbjct: 297 LVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELD 356
Query: 396 LFSNNFTGS--LSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTG-G 452
L ++ S + L N S L L L N F + P + +DL+
Sbjct: 357 LSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKD 416
Query: 453 IPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN----LPPFKSC 508
+ L+ N+S++ L LP+LQ+ + + ++
Sbjct: 417 AQSPFQNLHLLKVLNLSHS-LLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTL 475
Query: 509 KSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNS 568
+ ++ +LS + ++ + +DL++N+L S E L+ L + L+L+ N
Sbjct: 476 GRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNH 534
Query: 569 LSGQIPAKFGSCSSLTVLNVSFNDISGS 596
+S +P+ S +N+ N + +
Sbjct: 535 ISIILPSLLPILSQQRTINLRQNPLDCT 562
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 233 bits (596), Expect = 2e-66
Identities = 94/517 (18%), Positives = 167/517 (32%), Gaps = 22/517 (4%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
N L S N L +L LD++R QS L L +
Sbjct: 31 LPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTA 90
Query: 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
N +S + LK L + S + K+LE L+L N ++ +
Sbjct: 91 NPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGF 150
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSE--VQYLDIAGANLSGSIPKELSNLTKLESLFL 276
+ + ++ N + ++ + L++ G N I + +SL
Sbjct: 151 PTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNG-NDIAGIEPGAFDSAVFQSLNF 209
Query: 277 FRNQLAGQVPWE--FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRL--LSLMYNEMSGT 332
Q + S + +L D P F L + + ++L +
Sbjct: 210 GGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNI 269
Query: 333 VPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-GVL 391
+ L+ L + + S LP L S L+ + +S N F + S L
Sbjct: 270 SSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFEN-LCQISASNFPSL 327
Query: 392 FKLILFSNNFTGSLSP-SLSNCSSLVRLRLEDN--SFSGEIPLKFSQLPDINYIDLSRNG 448
L + N L L N +L L L + S L+ L + ++LS N
Sbjct: 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNE 387
Query: 449 FTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWS-LPSLQNFSASACNITGNLPP--F 505
+ +LE +++ +L + L L+ + S + F
Sbjct: 388 PLSLKTEAFKECPQLELLDLAFT-RLKVKDAQSPFQNLHLLKVLNLSHSLLDI-SSEQLF 445
Query: 506 KSCKSISVIESHMNNLSGTI---PESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVL 562
++ + N+ S+ LE + L+ L L ++ +
Sbjct: 446 DGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHV 505
Query: 563 DLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPS 599
DLSHN L+ + LN++ N IS +PS
Sbjct: 506 DLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPS 541
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 220 bits (562), Expect = 8e-62
Identities = 88/504 (17%), Positives = 144/504 (28%), Gaps = 63/504 (12%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV 165
N + + + P + N S L+ S N L NL LD
Sbjct: 17 YNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIH 73
Query: 166 PAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTH 225
L L L + + K+L+ L
Sbjct: 74 EDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQT------------------ 115
Query: 226 MEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV 285
+S L N LESL+L N ++
Sbjct: 116 ------------------------------GISSIDFIPLHNQKTLESLYLGSNHISSIK 145
Query: 286 PWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS-GTVPESLVQLPSLE 344
+ LK LD +N + E + L+ LSL N + +
Sbjct: 146 LPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQ 205
Query: 345 ILFIWNNYFSGSLPENLGRNS--KLRWVDVSTNNFNGSIPPDICSGGV---LFKLILFSN 399
L + + L ++ L + I P + G + + L +
Sbjct: 206 SLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDE-DISPAVFEGLCEMSVESINLQKH 264
Query: 400 NFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQ 459
F S + S L L L S E+P L + + LS N F +
Sbjct: 265 YFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASN 323
Query: 460 ASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITG---NLPPFKSCKSISVIES 516
L + ++ N K + +L +L+ S +I ++ + +
Sbjct: 324 FPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNL 383
Query: 517 HMNNLSGTIPESVSNCVELERIDLANNKLIGSIPE-VLARLPVLGVLDLSHNSLSGQIPA 575
N E+ C +LE +DLA +L + L +L VL+LSH+ L
Sbjct: 384 SYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQ 443
Query: 576 KFGSCSSLTVLNVSFNDISGSIPS 599
F +L LN+ N
Sbjct: 444 LFDGLPALQHLNLQGNHFPKGNIQ 467
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 201 bits (514), Expect = 2e-55
Identities = 74/409 (18%), Positives = 134/409 (32%), Gaps = 16/409 (3%)
Query: 202 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261
+ LN +IP L + +E +N + + +LD+ +
Sbjct: 17 YNCENLGLN-EIPGTL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIH 73
Query: 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRL 321
+ +L++L L N L S LK L +S + K L
Sbjct: 74 EDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLES 133
Query: 322 LSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVS-TNNFNGS 380
L L N +S L++L NN E++ + + ++ N
Sbjct: 134 LYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193
Query: 381 IPPDICSGGVLFKLILFSNNFTGSLSPSLSNCS--SLVRLRLEDNSFSGEIPLKFSQLPD 438
I P V L + L N + SL ED P F L +
Sbjct: 194 IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCE 253
Query: 439 IN--YIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASAC 496
++ I+L ++ F + S L+ +++ L +P+ L +L+ SA
Sbjct: 254 MSVESINLQKHYFFNISSNTFHCFSGLQELDLTAT-HLSE-LPSGLVGLSTLKKLVLSAN 311
Query: 497 NITGNLPP--FKSCKSISVIESHMNNLSGTI-PESVSNCVELERIDLANNKL--IGSIPE 551
L + S++ + N + + N L +DL+++ +
Sbjct: 312 KFEN-LCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNL 370
Query: 552 VLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG 600
L L L L+LS+N F C L +L+++F +
Sbjct: 371 QLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQS 419
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 2e-45
Identities = 71/344 (20%), Positives = 118/344 (34%), Gaps = 13/344 (3%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFN---LTSLISLDISRNNFSGHFPGGIQSLRNLLVLDA 156
L +F S+ S+++ ++ F L LD
Sbjct: 227 IQSLWLGTFEDMDDE-DISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDL 285
Query: 157 FSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE 216
+ S +P+ + L LK L L+ + F +F SL L + GN ++
Sbjct: 286 TATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTG 344
Query: 217 -LGMLKTVTHMEIGYNF--YQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLES 273
L L+ + +++ ++ QL N+S +Q L+++ + +LE
Sbjct: 345 CLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLEL 404
Query: 274 LFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332
L L +L + F + LK L+LS + L + F L L+ L+L N
Sbjct: 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKG 464
Query: 333 V---PESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGG 389
SL L LEIL + S + VD+S N S + S
Sbjct: 465 NIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLT-SSSIEALSHL 523
Query: 390 VLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKF 433
L L SN+ + L L S + L N +
Sbjct: 524 KGIYLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIY 567
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 5e-23
Identities = 50/254 (19%), Positives = 95/254 (37%), Gaps = 27/254 (10%)
Query: 103 LVDLNLSHN--SFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
L +L+LSH+ S +++ NL+ L SL++S N + L +LD
Sbjct: 352 LRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTR 411
Query: 161 FSGSVP-AEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ L LKVLNL+ S F +L+ L+L GN +
Sbjct: 412 LKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNS 471
Query: 220 LKTVTHME---IGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFL 276
L+T+ +E + + ++ + ++D++ L+ S + LS+L + L L
Sbjct: 472 LQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIY-LNL 530
Query: 277 FRNQLAGQVPWEFSRVTTLKSLDLSDNRLS--------------------GPIPESFADL 316
N ++ +P ++ ++++L N L +
Sbjct: 531 ASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIYFLEWYKENMQKLEDTEDTLCENP 590
Query: 317 KNLRLLSLMYNEMS 330
LR + L +S
Sbjct: 591 PLLRGVRLSDVTLS 604
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 224 bits (572), Expect = 4e-63
Identities = 104/519 (20%), Positives = 181/519 (34%), Gaps = 29/519 (5%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
+ +++LS N N + L LD+SR L +L L N
Sbjct: 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELG 218
P S L L+ L + + G +L+ L++A N ++ ++PA
Sbjct: 91 PIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFS 150
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSE----VQYLDIAGANLSGSIPKELSNLTKLESL 274
L + H+++ YN+ Q L + E LD++ N I + KL L
Sbjct: 151 NLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL-NPIDFIQDQAFQGIKLHEL 209
Query: 275 FLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSG------PIPESFADLKNLRL--LSLM 325
L N + + + L L P L ++ + L
Sbjct: 210 TLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLT 269
Query: 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDI 385
Y L ++ + + E++ ++ K + + + P
Sbjct: 270 YTNDFSDDIVKFHCLANVSAMSLAGVSIKY--LEDVPKHFKWQSLSIIRCQLK-QFPTLD 326
Query: 386 CSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDN--SFSGEIPLKFSQLPDINYID 443
L L L N GS+S SL L L N SFSG + ++D
Sbjct: 327 LPF--LKSLTLTMNK--GSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLD 382
Query: 444 LSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTW-SLPSLQNFSASACNITGNL 502
LS NG + + +L++ + ++ L + + SL L S N +
Sbjct: 383 LSFNGAII-MSANFMGLEELQHLDFQHS-TLKRVTEFSAFLSLEKLLYLDISYTNTKIDF 440
Query: 503 PP-FKSCKSISVIESHMNNLSGTIPESV-SNCVELERIDLANNKLIGSIPEVLARLPVLG 560
F S++ ++ N+ +V +N L +DL+ +L V L L
Sbjct: 441 DGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQ 500
Query: 561 VLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPS 599
+L++SHN+L + + SL+ L+ SFN I S
Sbjct: 501 LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGI 539
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 218 bits (558), Expect = 4e-61
Identities = 99/514 (19%), Positives = 174/514 (33%), Gaps = 29/514 (5%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
F+EL L+LS L L +L ++ N PG L +L L A
Sbjct: 55 FSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVET 114
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
+ I QL LK LN+A ++ +P+ F + +L + L+ N + +L
Sbjct: 115 KLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQ 174
Query: 219 MLKTVTHMEIGYNFYQGN----IPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLES 273
L+ + + + N I Q ++ L + G S +I K L NL L
Sbjct: 175 FLRENPQVNLSLDM-SLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHV 233
Query: 274 LFLFRNQLAGQVPWEFSRVTTLKSL--------DLSDNRLSGPIPESFADLKNLRLLSLM 325
L + + E + ++ L L+ F L N+ +SL
Sbjct: 234 HRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLA 293
Query: 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDI 385
+ E + + + L I +L L+ + ++ N GSI
Sbjct: 294 GVSIKY--LEDVPKHFKWQSLSIIRCQLKQFPTLDL---PFLKSLTLTMNK--GSISFKK 346
Query: 386 CSGGVLFKLILFSNNFT--GSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYID 443
+ L L L N + G S S +SL L L N + F L ++ ++D
Sbjct: 347 VALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLD 405
Query: 444 LSRNGFTGGIPTD-INQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNL 502
+ KL Y ++S L SL + + N
Sbjct: 406 FQHSTLKRVTEFSAFLSLEKLLYLDISYT-NTKIDFDGIFLGLTSLNTLKMAGNSFKDNT 464
Query: 503 PP--FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLG 560
F + +++ ++ L L+ +++++N L+ +L L
Sbjct: 465 LSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLS 524
Query: 561 VLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDIS 594
LD S N + SL N++ N ++
Sbjct: 525 TLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 7e-53
Identities = 81/504 (16%), Positives = 148/504 (29%), Gaps = 61/504 (12%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV 165
S + P +I +S ++D+S N + L LD
Sbjct: 16 YQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIE 72
Query: 166 PAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTH 225
L HL L L G+ P F SLE L L +G L T+
Sbjct: 73 DKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKK 132
Query: 226 MEIGYNFYQG-NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKL----ESLFLFRNQ 280
+ + +NF +P N++ + ++D++ + +L L + SL + N
Sbjct: 133 LNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNP 192
Query: 281 LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPE-SFADLKNLRLLSLMYNEMSGTVPESLVQ 339
+ + + + L L L N S I + +L L + L+ E + +
Sbjct: 193 I-DFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFE 251
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399
+E L + + ++ N + + L
Sbjct: 252 PSIMEGL----------------CDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGV 295
Query: 400 NFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQ 459
+ + L + + P LP + + L+ N + I
Sbjct: 296 SIKYL--EDVPKHFKWQSLSIIRCQLK-QFP--TLDLPFLKSLTLTMNKGS--ISFKKVA 348
Query: 460 ASKLEYFNVSNNPKLGGMIPAQTWSL--PSLQNFSASACNITGNLPPFKSCKSISVIESH 517
L Y ++S N L L SL++ S
Sbjct: 349 LPSLSYLDLSRN-ALSFSGCCSYSDLGTNSLRHLDLSFNGAI------------------ 389
Query: 518 MNNLSGTIPESVSNCVELERIDLANNKLIGSIP-EVLARLPVLGVLDLSHNSLSGQIPAK 576
+ + EL+ +D ++ L L L LD+S+ +
Sbjct: 390 ------IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGI 443
Query: 577 FGSCSSLTVLNVSFNDISGSIPSG 600
F +SL L ++ N + S
Sbjct: 444 FLGLTSLNTLKMAGNSFKDNTLSN 467
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 9e-50
Identities = 95/473 (20%), Positives = 177/473 (37%), Gaps = 36/473 (7%)
Query: 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
E + L + + V +L + +L R G++ L NL ++ +N
Sbjct: 25 EKMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGIKS--IDGVEYLNNLTQINFSNNQL 80
Query: 162 SGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLK 221
+ P + L L + + + + P + +L L L N + D P L L
Sbjct: 81 TDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLT 134
Query: 222 TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 281
+ +E+ N L ++ +Q L G ++ P L+NLT LE L + N++
Sbjct: 135 NLNRLELSSNTISDISA--LSGLTSLQQLSF-GNQVTDLKP--LANLTTLERLDISSNKV 189
Query: 282 AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
+ +++T L+SL ++N++S P L NL LSL N++ +L L
Sbjct: 190 SD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLT 243
Query: 342 SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNF 401
+L L + NN S L +KL + + N + P + L L L N
Sbjct: 244 NLTDLDLANNQISNL--APLSGLTKLTELKLGANQISNISPLAGLTA--LTNLELNENQL 299
Query: 402 TGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQAS 461
+SN +L L L N+ S P+ S L + + N + + + +
Sbjct: 300 ED--ISPISNLKNLTYLTLYFNNISDISPV--SSLTKLQRLFFYNNKVSD--VSSLANLT 353
Query: 462 KLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNL 521
+ + + +N ++ + P +L + + T +K+ SI ++
Sbjct: 354 NINWLSAGHN-QISDLTPLA--NLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGA 410
Query: 522 SGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIP 574
P ++S+ D+ N L EV + + SG +
Sbjct: 411 L-IAPATISDGGSYTEPDITWN-LPSYTNEVSYTFSQPVTIGKGTTTFSGTVT 461
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 3e-49
Identities = 90/487 (18%), Positives = 170/487 (34%), Gaps = 61/487 (12%)
Query: 108 LSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPA 167
+ F L + + + N + L + L A
Sbjct: 9 TQDTPINQIFTDT--ALAEKMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGIKS--ID 62
Query: 168 EISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHME 227
+ L +L +N + + + P + L + + N + D P
Sbjct: 63 GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP------------- 107
Query: 228 IGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPW 287
L N++ + L + ++ P L NLT L L L N ++
Sbjct: 108 -------------LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--IS 150
Query: 288 EFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILF 347
S +T+L+ L N+++ P A+L L L + N++S L +L +LE L
Sbjct: 151 ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLI 205
Query: 348 IWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSP 407
NN S LG + L + ++ N + S L L L +N +
Sbjct: 206 ATNNQISDI--TPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISN--LA 259
Query: 408 SLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFN 467
LS + L L+L N S PL + L + ++L+ N + I+ L Y
Sbjct: 260 PLSGLTKLTELKLGANQISNISPL--AGLTALTNLELNENQLED--ISPISNLKNLTYLT 315
Query: 468 VSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPE 527
+ N + + P SL LQ ++ ++ + +I+ + + N +S P
Sbjct: 316 LYFN-NISDISPVS--SLTKLQRLFFYNNKVS-DVSSLANLTNINWLSAGHNQISDLTP- 370
Query: 528 SVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLN 587
++N + ++ L + + A + + + +L PA S T +
Sbjct: 371 -LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALI--APATISDGGSYTEPD 427
Query: 588 VSFNDIS 594
+++N S
Sbjct: 428 ITWNLPS 434
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 174 bits (444), Expect = 3e-47
Identities = 91/473 (19%), Positives = 175/473 (36%), Gaps = 61/473 (12%)
Query: 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185
L S I+++ +L + + + +V + L+ + L
Sbjct: 2 PLGSATITQDTPINQIFT-DTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGI 58
Query: 186 SGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMS 245
+L ++ + N L D P L N++
Sbjct: 59 K--SIDGVEYLNNLTQINFSNNQLTDITP--------------------------LKNLT 90
Query: 246 EVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL 305
++ + + ++ P L+NLT L L LF NQ+ P +T L L+LS N +
Sbjct: 91 KLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTI 146
Query: 306 SGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS 365
S + + L +L+ LS T + L L +LE L I +N S L + +
Sbjct: 147 SDI--SALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISSNKVSD--ISVLAKLT 199
Query: 366 KLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSF 425
L + + N + P I + L +L L N +L++ ++L L L +N
Sbjct: 200 NLESLIATNNQISDITPLGILTN--LDELSLNGNQLKDI--GTLASLTNLTDLDLANNQI 255
Query: 426 SGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSL 485
S PL S L + + L N + + + + L ++ N +L + P +L
Sbjct: 256 SNLAPL--SGLTKLTELKLGANQISN--ISPLAGLTALTNLELNEN-QLEDISP--ISNL 308
Query: 486 PSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKL 545
+L + NI+ ++ P S + + + N +S S++N + + +N++
Sbjct: 309 KNLTYLTLYFNNIS-DISPVSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQI 365
Query: 546 IGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIP 598
P LA L + L L+ + + +++++ N N I
Sbjct: 366 SDLTP--LANLTRITQLGLNDQAWTNAPVNYK---ANVSIPNTVKNVTGALIA 413
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 2e-42
Identities = 79/412 (19%), Positives = 151/412 (36%), Gaps = 35/412 (8%)
Query: 194 GSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIA 253
G S +N L +G + ++ +V L
Sbjct: 1 GPLGSATITQ--DTPINQIFT--DTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQAD 54
Query: 254 GANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESF 313
+ + L L + NQL P +T L + +++N+++ P
Sbjct: 55 RLGIK--SIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--L 108
Query: 314 ADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVS 373
A+L NL L+L N+++ + L L +L L + +N S L + L+ +
Sbjct: 109 ANLTNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFG 164
Query: 374 TNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKF 433
N P + L +L + SN + L+ ++L L +N S PL
Sbjct: 165 -NQVTDLKPLANLTT--LERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPL-- 217
Query: 434 SQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSA 493
L +++ + L+ N + + L +++NN ++ + P L L
Sbjct: 218 GILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANN-QISNLAPLS--GLTKLTELKL 272
Query: 494 SACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVL 553
A I+ N+ P +++ +E + N L P +SN L + L N + P +
Sbjct: 273 GANQIS-NISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--V 327
Query: 554 ARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRL 605
+ L L L +N +S + + +++ L+ N IS P + R+
Sbjct: 328 SSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTPLANLTRI 377
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 2e-48
Identities = 103/534 (19%), Positives = 178/534 (33%), Gaps = 51/534 (9%)
Query: 107 NLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP 166
+F + P + S +LD+S N S L VLD
Sbjct: 13 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIED 69
Query: 167 AEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHM 226
L HL L L G+ F SL+ L L +G LKT+ +
Sbjct: 70 GAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKEL 129
Query: 227 EIGYNFYQ-GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLE----SLFLFRNQL 281
+ +N Q +P N++ +++LD++ + +L L ++ SL L N +
Sbjct: 130 NVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 189
Query: 282 AGQVPWEFSRVTTLKSLDLSDNRLSGPIPE-SFADLKNLRLLSLMYNEMSGT-------- 332
+ + L L L +N S + + L L + L+ E
Sbjct: 190 N-FIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDK 248
Query: 333 -VPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVL 391
E L L E + +Y+ + + + + + + + + G
Sbjct: 249 SALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFG-W 306
Query: 392 FKLIL--------------------FSNNFTGSLSPSLSNCSSLVRLRLEDN--SFSGEI 429
L L F++N G+ S + SL L L N SF G
Sbjct: 307 QHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNA-FSEVDLPSLEFLDLSRNGLSFKGCC 365
Query: 430 PLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTW-SLPSL 488
+ Y+DLS NG + ++ +LE+ + ++ L M + SL +L
Sbjct: 366 SQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHS-NLKQMSEFSVFLSLRNL 423
Query: 489 QNFSASACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESV-SNCVELERIDLANNKL 545
S + F S+ V++ N+ + + L +DL+ +L
Sbjct: 424 IYLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 482
Query: 546 IGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPS 599
P L L VL+++ N L F +SL + + N S P
Sbjct: 483 EQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 3e-36
Identities = 69/405 (17%), Positives = 134/405 (33%), Gaps = 37/405 (9%)
Query: 237 IPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK 296
IP L + LD++ L + +L+ L L R ++ + ++ L
Sbjct: 22 IPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLS 79
Query: 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF-SG 355
+L L+ N + +F+ L +L+ L + ++ + L +L+ L + +N S
Sbjct: 80 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF 139
Query: 356 SLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLIL---FSNNFTGSLSPSLSNC 412
LPE + L +D+S+N D+ + L L S N + P
Sbjct: 140 KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE 199
Query: 413 SSLVRLRLEDNSFSGEIPLK-FSQLPDINYIDLSRNGFTGG-----IPTDI---NQASKL 463
L +L L +N S + L + L F +
Sbjct: 200 IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTI 259
Query: 464 EYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITG--NLPPFKSCKSISVIESHMNNL 521
E F ++ I L ++ +FS + I + + + ++
Sbjct: 260 EEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQF 319
Query: 522 SGTIPESV----------------SNCVELERIDLANNKL--IGSIPEVLARLPVLGVLD 563
+S+ + LE +DL+ N L G + L LD
Sbjct: 320 PTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLD 379
Query: 564 LSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGS 608
LS N + + + F L L+ +++ + V + +
Sbjct: 380 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRN 422
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 2e-34
Identities = 88/475 (18%), Positives = 161/475 (33%), Gaps = 36/475 (7%)
Query: 102 ELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
L L L+ N + F L+SL L N + I L+ L L+ N
Sbjct: 77 HLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 135
Query: 161 F-SGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF----LHLAGNLLNDQIPA 215
S +P S L +L+ L+L+ + + + L L+ N +N I
Sbjct: 136 IQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQP 194
Query: 216 ELGMLKTVTHMEIGYNFYQGNIPWQ-LGNMSEVQYLDIAGANLSGS---IPKELSNLTKL 271
+ + + NF N+ + ++ ++ + + S L L
Sbjct: 195 GAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGL 254
Query: 272 ESLFLFRNQLAG------QVPWEFSRVTTLKSLDLSDNRLSGPIPESF-ADLKNLRLLSL 324
+L + +LA + F+ +T + S L + S+ ++L L++
Sbjct: 255 CNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNC 314
Query: 325 MYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD 384
+ + ++L SL+ L +N + + L ++D+S N +
Sbjct: 315 KFGQFPT------LKLKSLKRLTFTSNKGG-NAFSEVD-LPSLEFLDLSRNGLSFKGCCS 366
Query: 385 ICSGGV--LFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLK-FSQLPDINY 441
G L L L N ++S + L L + ++ F L ++ Y
Sbjct: 367 QSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425
Query: 442 IDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWS-LPSLQNFSASACNITG 500
+D+S N S LE ++ N ++ L +L S C +
Sbjct: 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGN-SFQENFLPDIFTELRNLTFLDLSQCQLEQ 484
Query: 501 NLPP--FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVL 553
L P F S S+ V+ N L L++I L N S P +
Sbjct: 485 -LSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 4e-25
Identities = 58/263 (22%), Positives = 96/263 (36%), Gaps = 32/263 (12%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
+ L L + F QFP L SL L + N F L +L LD
Sbjct: 302 YNFGWQHLELVNCKFG-QFP--TLKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSR 356
Query: 159 N--SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE 216
N SF G LK L+L+ + + S F + LE L + L
Sbjct: 357 NGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFS 415
Query: 217 LGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFL 276
+ ++ + YLDI+ + + + L+ LE L +
Sbjct: 416 V-----------------------FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 452
Query: 277 FRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 335
N + F+ + L LDLS +L P +F L +L++L++ N++
Sbjct: 453 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDG 512
Query: 336 SLVQLPSLEILFIWNNYFSGSLP 358
+L SL+ +++ N + S P
Sbjct: 513 IFDRLTSLQKIWLHTNPWDCSCP 535
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 4e-16
Identities = 45/240 (18%), Positives = 73/240 (30%), Gaps = 31/240 (12%)
Query: 370 VDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEI 429
NF IP ++ L L N S S + L L L
Sbjct: 12 YQCMELNFY-KIPDNLPFS--TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIE 68
Query: 430 PLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQ 489
+ L ++ + L+ N + S L+ L + L +L+
Sbjct: 69 DGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET-NLASLENFPIGHLKTLK 127
Query: 490 NFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSI 549
+ + I S +PE SN LE +DL++NK+
Sbjct: 128 ELNVAHNLIQ----------------------SFKLPEYFSNLTNLEHLDLSSNKIQSIY 165
Query: 550 PEVLARLPVLGV----LDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRL 605
L L + + LDLS N ++ I L L + N S ++ + L
Sbjct: 166 CTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGL 224
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 1e-46
Identities = 79/370 (21%), Positives = 147/370 (39%), Gaps = 27/370 (7%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
L + FP +L I + + + + + L ++ L +
Sbjct: 2 AATLATLPAPINQIFPDA--DLAEGIRAVLQKASVTD--VVTQEELESITKLVVAGEKVA 57
Query: 163 GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT 222
S+ I L +L+ LNL G+ + P + L L++ N + D + L L
Sbjct: 58 -SIQG-IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD--ISALQNLTN 111
Query: 223 VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282
+ + + + P L N++++ L++ N + S LSN+T L L + +++
Sbjct: 112 LRELYLNEDNISDISP--LANLTKMYSLNLGA-NHNLSDLSPLSNMTGLNYLTVTESKVK 168
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342
P + +T L SL L+ N++ P A L +L + N+++ + +
Sbjct: 169 DVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITD--ITPVANMTR 222
Query: 343 LEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402
L L I NN + L S+L W+++ TN + I + L L + SN +
Sbjct: 223 LNSLKIGNNKITDL--SPLANLSQLTWLEIGTNQIS-DINA-VKDLTKLKMLNVGSNQIS 278
Query: 403 GSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASK 462
L+N S L L L +N E L ++ + LS+N T P + SK
Sbjct: 279 D--ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSK 334
Query: 463 LEYFNVSNNP 472
++ + +N
Sbjct: 335 MDSADFANQV 344
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 2e-45
Identities = 69/354 (19%), Positives = 140/354 (39%), Gaps = 25/354 (7%)
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
+++E + A+++ + L + L + ++A + +T L+ L+L
Sbjct: 18 DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNL 73
Query: 301 SDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN 360
+ N+++ P ++L L L + N++ T +L L +L L++ + S
Sbjct: 74 NGNQITDISP--LSNLVKLTNLYIGTNKI--TDISALQNLTNLRELYLNEDNISD--ISP 127
Query: 361 LGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRL 420
L +K+ +++ N+ N S + + L L + + ++N + L L L
Sbjct: 128 LANLTKMYSLNLGANH-NLSDLSPLSNMTGLNYLTVTESKVKDV--TPIANLTDLYSLSL 184
Query: 421 EDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPA 480
N PL + L ++Y N T P + ++L + NN K+ + P
Sbjct: 185 NYNQIEDISPL--ASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNN-KITDLSPL 239
Query: 481 QTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDL 540
+L L I+ ++ K + ++ N +S ++N +L + L
Sbjct: 240 A--NLSQLTWLEIGTNQIS-DINAVKDLTKLKMLNVGSNQISD--ISVLNNLSQLNSLFL 294
Query: 541 ANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDIS 594
NN+L EV+ L L L LS N ++ P S S + + + I
Sbjct: 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 1e-35
Identities = 67/325 (20%), Positives = 129/325 (39%), Gaps = 45/325 (13%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
+ L LNL+ N + P + NL L +L I N + +Q+L NL L
Sbjct: 64 YLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD--ISALQNLTNLRELYLNE 119
Query: 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
++ S P ++ L + LNL ++ S + L +L + + + D P +
Sbjct: 120 DNISDISP--LANLTKMYSLNLGANHNLS-DLSPLSNMTGLNYLTVTESKVKDVTP--IA 174
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFR 278
L + + + YN + P L +++ + Y ++ P ++N+T+L SL +
Sbjct: 175 NLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGN 230
Query: 279 NQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338
N++ P + ++ L L++ N++S + DL L++L++ N++S L
Sbjct: 231 NKITDLSP--LANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISD--ISVLN 284
Query: 339 QLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFS 398
L L LF+ NN E +G + L + +S N+ P
Sbjct: 285 NLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP---------------- 328
Query: 399 NNFTGSLSPSLSNCSSLVRLRLEDN 423
L++ S + +
Sbjct: 329 ----------LASLSKMDSADFANQ 343
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 1e-35
Identities = 62/277 (22%), Positives = 111/277 (40%), Gaps = 19/277 (6%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
+L +L + N + + NLT+L L ++ +N S + +L + L+ +N
Sbjct: 87 LVKLTNLYIGTNKITD--ISALQNLTNLRELYLNEDNISD--ISPLANLTKMYSLNLGAN 142
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
S + +S + L L + S P + L L L N + D P L
Sbjct: 143 HNL-SDLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LAS 197
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L ++ + N P + NM+ + L I ++ P L+NL++L L + N
Sbjct: 198 LTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTN 253
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
Q++ +T LK L++ N++S +L L L L N++ E +
Sbjct: 254 QISD--INAVKDLTKLKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDMEVIGG 309
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376
L +L LF+ N+ + L SK+ D +
Sbjct: 310 LTNLTTLFLSQNHITDI--RPLASLSKMDSADFANQV 344
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 1e-30
Identities = 68/346 (19%), Positives = 127/346 (36%), Gaps = 71/346 (20%)
Query: 250 LDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPI 309
L A ++ P ++L + L + + V + ++ L ++ +++
Sbjct: 5 LATLPAPINQIFP--DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVASI- 59
Query: 310 PESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRW 369
+ L NL L+L N+++ L L L L+I N +
Sbjct: 60 -QGIEYLTNLEYLNLNGNQITD--ISPLSNLVKLTNLYIGTNKIT--------------- 101
Query: 370 VDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEI 429
I L N ++L L L +++ S
Sbjct: 102 ----------DISA-------------------------LQNLTNLRELYLNEDNISDIS 126
Query: 430 PLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQ 489
PL + L + ++L N + ++ + L Y V+ + K+ + P +L L
Sbjct: 127 PL--ANLTKMYSLNLGANHNLS-DLSPLSNMTGLNYLTVTES-KVKDVTP--IANLTDLY 180
Query: 490 NFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSI 549
+ S + I ++ P S S+ +++N ++ P V+N L + + NNK+
Sbjct: 181 SLSLNYNQIE-DISPLASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLS 237
Query: 550 PEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISG 595
P LA L L L++ N +S I A + L +LNV N IS
Sbjct: 238 P--LANLSQLTWLEIGTNQISD-INA-VKDLTKLKMLNVGSNQISD 279
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 1e-21
Identities = 44/304 (14%), Positives = 94/304 (30%), Gaps = 67/304 (22%)
Query: 295 LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS 354
+L ++ P ADL L ++ V + +L S+ L + +
Sbjct: 2 AATLATLPAPINQIFP--DADLAEGIRAVLQKASVTDVVTQE--ELESITKLVVAGEKVA 57
Query: 355 GSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSS 414
+ + + L +++++ N P LSN
Sbjct: 58 S--IQGIEYLTNLEYLNLNGNQITDISP--------------------------LSNLVK 89
Query: 415 LVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKL 474
L L + N + L ++ + L+ + + P + +K+ N+ N
Sbjct: 90 LTNLYIGTNKITDISA--LQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGAN--- 142
Query: 475 GGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVE 534
+ +L P + ++ + + + P ++N +
Sbjct: 143 ----------------------HNLSDLSPLSNMTGLNYLTVTESKVKDVTP--IANLTD 178
Query: 535 LERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDIS 594
L + L N++ P LA L L N ++ P + + L L + N I+
Sbjct: 179 LYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKIT 234
Query: 595 GSIP 598
P
Sbjct: 235 DLSP 238
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 88.8 bits (221), Expect = 4e-19
Identities = 40/229 (17%), Positives = 82/229 (35%), Gaps = 34/229 (14%)
Query: 398 SNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDI 457
+ P ++ + +R L+ S + + +L I + ++ I
Sbjct: 8 LPAPINQIFP-DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVAS--IQGI 62
Query: 458 NQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESH 517
+ LEY N++ N ++ + P +L L N IT ++ ++ ++ + +
Sbjct: 63 EYLTNLEYLNLNGN-QITDISPLS--NLVKLTNLYIGTNKIT-DISALQNLTNLRELYLN 118
Query: 518 MNNLSG---------------------TIPESVSNCVELERIDLANNKLIGSIPEVLARL 556
+N+S + +SN L + + +K+ P +A L
Sbjct: 119 EDNISDISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTP--IANL 176
Query: 557 PVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRL 605
L L L++N + P S +SL N I+ P + RL
Sbjct: 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITPVANMTRL 223
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 4e-46
Identities = 81/286 (28%), Positives = 129/286 (45%), Gaps = 70/286 (24%)
Query: 709 KAVLPTGITVSVKKI-EWGATRIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYLL 764
K L G V+VK++ E + +F T I H+NL+RL GFC + L+
Sbjct: 48 KGRLADGTLVAVKRLKEERTQGGE--LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 105
Query: 765 YDYLPNGNLSEKIRTKR------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 818
Y Y+ NG+++ +R + DW + +I LG ARGL +LH C P I H D+KA+NI
Sbjct: 106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANI 165
Query: 819 VFDENMEPHLAEFGF-KYL--------TQLADGSF----PAKIAW---TESGEFYNAMKE 862
+ DE E + +FG K + T + G+ P ++ +E
Sbjct: 166 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLSTGKSSEKT-------- 216
Query: 863 EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-------------------IDGLLGEM 903
DV+G+G ++LE++T R + + +D L
Sbjct: 217 ----DVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGN 272
Query: 904 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949
Y + EV + ++ VALLCT+S+P +RP M E +++L G
Sbjct: 273 YKDEEV----------EQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 1e-44
Identities = 92/523 (17%), Positives = 180/523 (34%), Gaps = 48/523 (9%)
Query: 106 LNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS 164
+ + ++ L + L +S N L L +L+ S +
Sbjct: 9 AFYRFCNLT-----QVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLT 63
Query: 165 VPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQI--PAELGMLK 221
+ E L +L++L+L S P F L L L L+D + LK
Sbjct: 64 IDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLK 123
Query: 222 TVTHMEIGYNFYQG-NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLT--KLESLFLFR 278
+T +++ N + + G ++ ++ +D + + EL L L L
Sbjct: 124 ALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAA 183
Query: 279 NQLAGQVPWEFS------RVTTLKSLDLSDNRLSGPIPESFAD------------LKNLR 320
N L +V ++ R L+ LD+S N + I +F++ ++
Sbjct: 184 NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243
Query: 321 LLSLMYNEMSGTVPESLVQLP--SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 378
++ + + L S+ L + + + L+ ++++ N N
Sbjct: 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKIN 303
Query: 379 GSIPPDICSG-GVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLP 437
I + G L L L N S + + + L+ N + F L
Sbjct: 304 -KIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLE 362
Query: 438 DINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACN 497
+ +DL N T I+ + +S N + +P + + + S +
Sbjct: 363 KLQTLDLRDNALT-----TIHFIPSIPDIFLSGNKLVT--LPKINLTANLI-HLSENRLE 414
Query: 498 ITGNLPPFKSCKSISVIESHMNNLSGTIPESV-SNCVELERIDLANNKLIGSI-----PE 551
L + ++ + N S + S LE++ L N L + +
Sbjct: 415 NLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWD 474
Query: 552 VLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDIS 594
V L L VL L+HN L+ P F ++L L+++ N ++
Sbjct: 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT 517
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 173 bits (439), Expect = 2e-44
Identities = 114/612 (18%), Positives = 202/612 (33%), Gaps = 61/612 (9%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
+L L L E F NL +L LD+ + P Q L +L L +
Sbjct: 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYF 106
Query: 159 NSFSGSV--PAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPA 215
S +V L+ L L+L+ + + FG SL+ + + N +
Sbjct: 107 CGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166
Query: 216 ELGML--KTVTHMEIGYNFYQGNIPWQLGNMSEV------QYLDIAGANLSGSIPKELSN 267
EL L KT++ + N + G + LD++G + I SN
Sbjct: 167 ELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSN 226
Query: 268 ------------LTKLESLFLFRNQLAGQVPWEFS--RVTTLKSLDLSDNRLSGPIPESF 313
+ + + F+ ++++ LDLS + F
Sbjct: 227 AISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVF 286
Query: 314 ADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVS 373
LK+L++L+L YN+++ E+ L +L++L + N N K+ ++D+
Sbjct: 287 ETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQ 346
Query: 374 TNNFNGSIPPDICSG-GVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLK 432
N+ I L L L N T ++ S+ + L N +
Sbjct: 347 KNHIA-IIQDQTFKFLEKLQTLDLRDNALT-----TIHFIPSIPDIFLSGNKLVTLPKIN 400
Query: 433 FSQLPDINYIDLSRNGFTG-GIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNF 491
+ N I LS N I + + L+ ++ N PSL+
Sbjct: 401 LTA----NLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQL 456
Query: 492 SASACNITGNLPP------FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKL 545
+ F+ + V+ + N L+ P S+ L + L +N+L
Sbjct: 457 FLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRL 516
Query: 546 IGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRL 605
L L +LD+S N L P F SL+VL+++ N +
Sbjct: 517 TVLSHNDL--PANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELSTFINW 571
Query: 606 MGSSAY-----------AGNPKLCGAPLQPCHASVAILGKGTGKLKF-VLLLCAGIVMFI 653
+ + G L + LKF + ++C +
Sbjct: 572 LNHTNVTIAGPPADIYCVYPDSFSGVSLFSLSTEGCDEEEVLKSLKFSLFIVCTVTLTLF 631
Query: 654 AAALLGIFFFRR 665
+L + FR
Sbjct: 632 LMTILTVTKFRG 643
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-27
Identities = 88/458 (19%), Positives = 158/458 (34%), Gaps = 53/458 (11%)
Query: 72 KNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFN-------- 123
N++ +++ L I L++S N ++ N
Sbjct: 182 AANSLYSRVSVDWGKCMNPFRNMVLEI-------LDVSGNGWTVDITGNFSNAISKSQAF 234
Query: 124 ----LTSLISLDISRNNFSGHFPGGIQSLR--NLLVLDAFSNSFSGSVPAEISQLEHLKV 177
++ +N L ++ LD L+ LKV
Sbjct: 235 SLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKV 294
Query: 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI 237
LNLA + + F +L+ L+L+ NLL + + L V ++++ N
Sbjct: 295 LNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQ 354
Query: 238 PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKS 297
+ ++Q LD+ L+ + + + +FL N+L +
Sbjct: 355 DQTFKFLEKLQTLDLRDNALT-----TIHFIPSIPDIFLSGNKLVTLPKINLT----ANL 405
Query: 298 LDLSDNRLSG-PIPESFADLKNLRLLSLMYNEMSGTVPESLVQ-LPSLEILFIWNNYFSG 355
+ LS+NRL I + +L++L L N S + PSLE LF+ N
Sbjct: 406 IHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQL 465
Query: 356 SLPENLGRN-----SKLRWVDVSTNNFNGSIPPDICSGGV-LFKLILFSNNFTGSLSPSL 409
+ L + S L+ + ++ N N S+PP + S L L L SN T LS +
Sbjct: 466 AWETELCWDVFEGLSHLQVLYLNHNYLN-SLPPGVFSHLTALRGLSLNSNRLT-VLSHN- 522
Query: 410 SNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVS 469
++L L + N P F L + +D++ N F + ++ + + N +
Sbjct: 523 DLPANLEILDISRNQLLAPNPDVFVSL---SVLDITHNKFI----CECELSTFINWLNHT 575
Query: 470 NNPKLGGMIPAQTWSLPSLQ-----NFSASACNITGNL 502
N G S + S C+ L
Sbjct: 576 NVTIAGPPADIYCVYPDSFSGVSLFSLSTEGCDEEEVL 613
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 1e-08
Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
Query: 519 NNLSGTIPESVSNCVELERIDLANNKLIGSI-PEVLARLPVLGVLDLSHNSLSGQIPAK- 576
N + S +L+ ++L + +I E LP L +LDL + + +
Sbjct: 34 NYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIY-FLHPDA 92
Query: 577 FGSCSSLTVLNVSFNDISGSIPSGKVLRLMGS 608
F L L + F +S ++ R + +
Sbjct: 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKA 124
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 1e-42
Identities = 96/508 (18%), Positives = 187/508 (36%), Gaps = 39/508 (7%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV 165
+ SF+ P + ++ SLD+S N + G +++ NL VL S+ + ++
Sbjct: 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRIN-TI 65
Query: 166 PAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTV 223
+ L L+ L+L+ ++ S S FG SL++L+L GN + + L +
Sbjct: 66 EGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNL 125
Query: 224 THMEIGYNFYQGNIPWQ-LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282
+ IG I ++ + L+I +L + L ++ + L L ++ A
Sbjct: 126 QTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342
+ +++++ L+L D L+ + + + S ES +L
Sbjct: 186 FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLK 245
Query: 343 LEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402
L + + ++ N + ++ + + + + +L +
Sbjct: 246 LLRYILELSEVEF---DDCTLNGLGDFNPSESDVVSELGKVETVT---IRRLHIPQFYLF 299
Query: 403 GSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGI---PTDINQ 459
LS S + R+ +E++ L + ++DLS N
Sbjct: 300 YDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGA 359
Query: 460 ASKLEYFNVSNN-----PKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVI 514
L+ +S N K G + +L +L + S + + + +
Sbjct: 360 WPSLQTLVLSQNHLRSMQKTGEI----LLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFL 415
Query: 515 ESHMNNLSGTIPESVSNCV--ELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQ 572
NLS T V C+ LE +D++NN L S LP L L +S N L
Sbjct: 416 -----NLSSTGIRVVKTCIPQTLEVLDVSNNNL-DSFS---LFLPRLQELYISRNKLK-T 465
Query: 573 IPAKFGSCSSLTVLNVSFNDISGSIPSG 600
+P L V+ +S N + S+P G
Sbjct: 466 LPD-ASLFPVLLVMKISRNQLK-SVPDG 491
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 5e-39
Identities = 85/477 (17%), Positives = 156/477 (32%), Gaps = 29/477 (6%)
Query: 103 LVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
L L L + + + F +L SL LD+S N+ S L +L L+ N +
Sbjct: 52 LQVLILKSSRIN-TIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPY 110
Query: 162 SG-SVPAEISQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAELGM 219
V + L +L+ L + I F SL L + L + L
Sbjct: 111 QTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
++ + H+ + + + +S V+YL++ NL+ L +
Sbjct: 171 IRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAF 230
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
+ + F+ + L L + + F D L +E V+
Sbjct: 231 RGSVLTDESFNELLKLLRYILELSEVE------FDDCTLNGLGDFNPSESDVVSELGKVE 284
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399
++ L I Y L K++ + V + +P + + S
Sbjct: 285 TVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSE 343
Query: 400 NFTGSLSP----SLSNCSSLVRLRLEDNSFS--GEIPLKFSQLPDINYIDLSRNGFTGGI 453
N SL L L N + L ++ +D+SRN F +
Sbjct: 344 NLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHP-M 402
Query: 454 PTDINQASKLEYFNVSNNPKLGGMIPAQTWSLP-SLQNFSASACNITGNLPPFKSCKSIS 512
P K+ + N+S+ I +P +L+ S N+ + +
Sbjct: 403 PDSCQWPEKMRFLNLSST-----GIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELY 457
Query: 513 VIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSL 569
+ S N L T+P++ L + ++ N+L + RL L + L N
Sbjct: 458 I--SR-NKLK-TLPDAS-LFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 4e-22
Identities = 68/354 (19%), Positives = 116/354 (32%), Gaps = 23/354 (6%)
Query: 69 KCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLI 128
+ + + V S FNEL+ L S + + L L
Sbjct: 209 ARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELS-EVEFDDCTLNGLG 267
Query: 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP 188
+ S ++ + L + S LE +K + + S
Sbjct: 268 DFNPSESDVVSELGK--VETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLV 325
Query: 189 IPSQFGSFKSLEFLHLAGNLLNDQI---PAELGMLKTVTHMEIGYNFYQ--GNIPWQLGN 243
S KSLEFL L+ NL+ ++ A G ++ + + N + L
Sbjct: 326 PCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLT 385
Query: 244 MSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDN 303
+ + LDI+ +P K+ L L + V TL+ LD+S+N
Sbjct: 386 LKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNN 441
Query: 304 RLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 363
L L L+ L + N++ T+P++ P L ++ I N R
Sbjct: 442 NLD----SFSLFLPRLQELYISRNKLK-TLPDA-SLFPVLLVMKISRNQLKSVPDGIFDR 495
Query: 364 NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVR 417
+ L+ + + TN ++ S C L N+ S S VR
Sbjct: 496 LTSLQKIWLHTNPWDCS-----CPRIDYLSRWLNKNSQKEQGSAKCSGSGKPVR 544
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 2e-41
Identities = 91/513 (17%), Positives = 170/513 (33%), Gaps = 77/513 (15%)
Query: 95 PLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154
P + L + ++ + + PVE N+ S + + + + P G R + V
Sbjct: 5 PRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVS 63
Query: 155 DAFSNSFSG------------SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202
S+P LE L + + + +P S KSL
Sbjct: 64 RLRDCLDRQAHELELNNLGLSSLPELPPHLES---LVASCNSLT-ELPELPQSLKSLLVD 119
Query: 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262
+ L+D +P L ++ + N + +P +L N S ++ +D+ +L +P
Sbjct: 120 NNNLKALSD-LPPLL------EYLGVSNNQLE-KLP-ELQNSSFLKIIDVDNNSLK-KLP 169
Query: 263 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLL 322
+L + NQL + E + L ++ +N L +P+ +L +
Sbjct: 170 DLPPSLEFIA---AGNNQL--EELPELQNLPFLTAIYADNNSLKK-LPDL---PLSLESI 220
Query: 323 SLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIP 382
N + L LP L ++ NN +LP+ L ++V N +P
Sbjct: 221 VAGNNIL--EELPELQNLPFLTTIYADNNLLK-TLPDLPP---SLEALNVRDNYLT-DLP 273
Query: 383 PDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYI 442
S L L + N F+ LS N L L N + P + +
Sbjct: 274 ELPQS---LTFLDVSENIFS-GLSELPPN---LYYLNASSNEIR-SLC---DLPPSLEEL 322
Query: 443 DLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNL 502
++S N +P +LE S N L +P +L+ +
Sbjct: 323 NVSNNKLI-ELPALP---PRLERLIASFN-HL-AEVPE---LPQNLKQLHVEYNPLR-EF 372
Query: 503 PPFKSCKSISVIES-HMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGV 561
P +E MN+ +PE N L+++ + N L P++ +
Sbjct: 373 PD-----IPESVEDLRMNSHLAEVPELPQN---LKQLHVETNPLR-EFPDIPESVE---D 420
Query: 562 LDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDIS 594
L ++ + + L +
Sbjct: 421 LRMNSERVVDPYEFAHETTDKLEDDVFEHHHHH 453
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 6e-36
Identities = 82/480 (17%), Positives = 159/480 (33%), Gaps = 111/480 (23%)
Query: 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179
+ T L +N + P +++++ + + + P + + V
Sbjct: 6 RNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSR 64
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPW 239
L + L L L+ +P L
Sbjct: 65 LRDC-----------LDRQAHELELNNLGLSS-LPELPPHL------------------- 93
Query: 240 QLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299
+ L + +L+ +P+ +L L L+ P L+ L
Sbjct: 94 --------ESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALSDLPP-------LLEYLG 137
Query: 300 LSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE 359
+S+N+L +PE + L+++ + N + +P+ PSLE + NN LPE
Sbjct: 138 VSNNQLEK-LPE-LQNSSFLKIIDVDNNSLK-KLPDLP---PSLEFIAAGNNQLE-ELPE 190
Query: 360 NLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419
L L + N+ +P S L ++ +N L P L N L +
Sbjct: 191 -LQNLPFLTAIYADNNSLK-KLPDLPLS---LESIVAGNNILE-EL-PELQNLPFLTTIY 243
Query: 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIP 479
++N +P P + +++ N T +P + L+ + +
Sbjct: 244 ADNNLLK-TLP---DLPPSLEALNVRDNYLTD-LPELPQSLTFLDVSENIFS-----GLS 293
Query: 480 AQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERID 539
P+L +AS+ I ++ + + LE ++
Sbjct: 294 E---LPPNLYYLNASSNEIR------------------------SLCDLPPS---LEELN 323
Query: 540 LANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPS 599
++NNKLI +P + RL L S N L+ ++P +L L+V +N + P
Sbjct: 324 VSNNKLI-ELPALPPRL---ERLIASFNHLA-EVPELPQ---NLKQLHVEYNPLR-EFPD 374
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 2e-31
Identities = 72/381 (18%), Positives = 129/381 (33%), Gaps = 51/381 (13%)
Query: 91 LPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRN 150
K L L L +S+N + P E+ N + L +D+ N+ P SL
Sbjct: 121 NNLKALSDLPPLLEYLGVSNNQLE-KLP-ELQNSSFLKIIDVDNNSLK-KLPDLPPSLEF 177
Query: 151 LLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN 210
+ A +N +P E+ L L + + +P SLE + N+L
Sbjct: 178 ---IAAGNNQLE-ELP-ELQNLPFLTAIYADNNSLKK-LPDLPL---SLESIVAGNNIL- 227
Query: 211 DQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTK 270
+ EL L +T + N + +P ++ + D N +P+ +LT
Sbjct: 228 -EELPELQNLPFLTTIYADNNLLK-TLPDLPPSLEALNVRD----NYLTDLPELPQSLTF 281
Query: 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330
L+ + L L L+ S N + + + +L L++ N++
Sbjct: 282 LDVSENIFSGL-------SELPPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLI 330
Query: 331 GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV 390
+P P LE L N+ + +PE L+ + V N P S
Sbjct: 331 -ELPAL---PPRLERLIASFNHLA-EVPELPQ---NLKQLHVEYNPLR-EFPDIPES--- 378
Query: 391 LFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFT 450
+ L + N+ + N L +L +E N E P + + ++
Sbjct: 379 VEDLRM--NSHLAEVPELPQN---LKQLHVETNPLR-EFPDIPESV---EDLRMNSERVV 429
Query: 451 GGIPTDINQASKLEYFNVSNN 471
KLE ++
Sbjct: 430 DPYEFAHETTDKLEDDVFEHH 450
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-27
Identities = 67/358 (18%), Positives = 113/358 (31%), Gaps = 67/358 (18%)
Query: 248 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307
Q +NL+ +P E N+ + ++ P + L D
Sbjct: 14 QEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-- 70
Query: 308 PIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKL 367
+ L L +S ++PE P LE L N + LPE L
Sbjct: 71 ---------RQAHELELNNLGLS-SLPELP---PHLESLVASCNSLT-ELPELPQSLKSL 116
Query: 368 RWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSG 427
+ + + P +L L + +N L P L N S L + +++NS
Sbjct: 117 LVDNNNLKALSDLPP-------LLEYLGVSNNQLE-KL-PELQNSSFLKIIDVDNNSLK- 166
Query: 428 EIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPS 487
++P P + +I N +P ++ L NN L + S
Sbjct: 167 KLP---DLPPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNN-SLKKLPD----LPLS 216
Query: 488 LQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIG 547
L++ A + + N L I NN L
Sbjct: 217 LESIVAGNNILE-------------------------ELPELQNLPFLTTIYADNNLLK- 250
Query: 548 SIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRL 605
++P+ P L L++ N L+ +P S + L V F+ +S P+ L
Sbjct: 251 TLPD---LPPSLEALNVRDNYLT-DLPELPQSLTFLDVSENIFSGLSELPPNLYYLNA 304
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 2e-17
Identities = 49/248 (19%), Positives = 86/248 (34%), Gaps = 47/248 (18%)
Query: 381 IPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPD-- 438
I P S L + + S+N T + N S + + P + +
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 439 -----------INYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPS 487
+ ++L+ G + +P LE S N L +P SL S
Sbjct: 62 VSRLRDCLDRQAHELELNNLGLS-SLPELP---PHLESLVASCN-SL-TELPELPQSLKS 115
Query: 488 LQNFSASACNITG----------------NLPPFKSCKSISVIESHMNNLSGTIPESVSN 531
L + + ++ LP ++ + +I+ N+L +P+ +
Sbjct: 116 LLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK-KLPDLPPS 174
Query: 532 CVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFN 591
LE I NN+L +PE L LP L + +NSL ++P SL + N
Sbjct: 175 ---LEFIAAGNNQLE-ELPE-LQNLPFLTAIYADNNSLK-KLP---DLPLSLESIVAGNN 225
Query: 592 DISGSIPS 599
+ +P
Sbjct: 226 ILE-ELPE 232
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 5e-09
Identities = 30/152 (19%), Positives = 55/152 (36%), Gaps = 18/152 (11%)
Query: 454 PTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISV 513
P +++ E S+N +P + ++ S + + N PP
Sbjct: 5 PRNVSNTFLQEPLRHSSNLTE---MPVEAENVKSKTEYYNAWSEWERNAPP--------G 53
Query: 514 IESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQI 573
+ + + + ++L N L S+PE+ L L S NSL+ ++
Sbjct: 54 NGEQREMAVSRLRDCLDR--QAHELELNNLGL-SSLPELPPHLESL---VASCNSLT-EL 106
Query: 574 PAKFGSCSSLTVLNVSFNDISGSIPSGKVLRL 605
P S SL V N + +S P + L +
Sbjct: 107 PELPQSLKSLLVDNNNLKALSDLPPLLEYLGV 138
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 2e-39
Identities = 80/495 (16%), Positives = 158/495 (31%), Gaps = 32/495 (6%)
Query: 101 NELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
N ++ +S Q + + ++ LD+S N S + L +L+ SN
Sbjct: 10 NRYKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
++ L L+ L+L +Y + S+E LH A N ++ +
Sbjct: 69 VLYE--TLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNISR-VSCS--R 118
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG-SIPKELSNLTKLESLFLFR 278
+ ++ + N G S VQYLD+ + + + ++ LE L L
Sbjct: 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178
Query: 279 NQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338
N + V + LK+LDLS N+L+ + F + +SL N++ + ++L
Sbjct: 179 NFIY-DVKGQVV-FAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALR 234
Query: 339 QLPSLEILFIWNNYFS-GSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILF 397
+LE + N F G+L + +N +++ V + + L +
Sbjct: 235 FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVA---KQTVKKLTGQNEEECTVPTLGHY 291
Query: 398 SNNFTGSL-SPSLSNCSSLVRLRLEDNSFSG----EIPLKFSQLPDINYIDLSRNGFTGG 452
L +P +L R S G + + ID + +
Sbjct: 292 GAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTV 351
Query: 453 IPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQ---NFSASACNITGNLPPFKSCK 509
I + L + + L + + +
Sbjct: 352 IDQVTLRKQAKITLEQKKK-ALDEQVSNGRRAHAELDGTLQQAVGQIELQHATEEQSPLQ 410
Query: 510 SISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSL 569
+ I + +N + D+ +K E + G DL+ S
Sbjct: 411 LLRAIVKRYEEMYVEQQSVQNNAIRDW--DMYQHKETQLAEENARLKKLNGEADLALASA 468
Query: 570 SGQIPAKFGSCSSLT 584
+ + +L
Sbjct: 469 NATLQELVVREQNLA 483
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 2e-37
Identities = 74/445 (16%), Positives = 148/445 (33%), Gaps = 70/445 (15%)
Query: 145 IQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 204
Q+ + +S ++ + ++K L+L+G+ S + F LE L+L
Sbjct: 6 KQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNL 65
Query: 205 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264
+ N+L + L ++S ++ LD+ + E
Sbjct: 66 SSNVLYE-TLD-------------------------LESLSTLRTLDLNNNYVQ-----E 94
Query: 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSL 324
L +E+L N ++ +V SR K++ L++N+++ ++ L L
Sbjct: 95 LLVGPSIETLHAANNNIS-RVS--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDL 151
Query: 325 MYNEMSG-TVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPP 383
NE+ E +LE L + N+ +
Sbjct: 152 KLNEIDTVNFAELAASSDTLEHLNLQYNFIY-------------------------DVKG 186
Query: 384 DICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYID 443
+ L L L SN + P + + + + L +N I ++ + D
Sbjct: 187 QVVFAK-LKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFD 243
Query: 444 LSRNGFTGGIPTD-INQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNL 502
L NGF G D ++ +++ KL G + ++P+L ++ A C
Sbjct: 244 LRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTG-QNEEECTVPTLGHYGAYCCEDLPA- 301
Query: 503 PPFKSCKSISVIESHMNNLSG----TIPESVSNCVELERIDLANNKLIGSIPEVLARLPV 558
P ++ E + + G + N ID + I +V R
Sbjct: 302 PFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQA 361
Query: 559 LGVLDLSHNSLSGQIPAKFGSCSSL 583
L+ +L Q+ + + L
Sbjct: 362 KITLEQKKKALDEQVSNGRRAHAEL 386
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 1e-34
Identities = 57/364 (15%), Positives = 120/364 (32%), Gaps = 21/364 (5%)
Query: 242 GNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLS 301
N + + + ++L ++ + ++ L L N L+ + + T L+ L+LS
Sbjct: 7 QNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLS 66
Query: 302 DNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL 361
N L + L LR L L N + L+ PS+E L NN S + +
Sbjct: 67 SNVLYETLD--LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RVSCSR 118
Query: 362 GRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG-SLSPSLSNCSSLVRLRL 420
G+ + + ++ N D + L L N + + ++ +L L L
Sbjct: 119 GQG--KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176
Query: 421 EDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPA 480
+ N ++ + +DLS N + + A+ + + ++ NN KL +I
Sbjct: 177 QYNFIY-DVK-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNN-KL-VLIEK 231
Query: 481 QTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDL 540
+L++F K+ V + ++ C
Sbjct: 232 ALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHY 291
Query: 541 ANNKLIGSIPEVLARLPVLGVLDLSHNSLSG----QIPAKFGSCSSLTVLNVSFNDISGS 596
RL L + + S G ++ + + + ++ +
Sbjct: 292 GAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYR-T 350
Query: 597 IPSG 600
+
Sbjct: 351 VIDQ 354
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 6e-23
Identities = 36/275 (13%), Positives = 85/275 (30%), Gaps = 12/275 (4%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG-HFPGGIQSLRNLLVLDAFS 158
++ L++N + ++ + + LD+ N +F S L L+
Sbjct: 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178
Query: 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
N V ++ LK L+L+ + + + +F S + ++ L N L I L
Sbjct: 179 NFIY-DVKGQV-VFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALR 234
Query: 219 MLKTVTHMEIGYN-FYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLF 277
+ + H ++ N F+ G + VQ + + + T
Sbjct: 235 FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK--QTVKKLTGQNEEECTVPTLGHYG 292
Query: 278 RNQLAGQVPWEFSRVTTLKSLDLSDNRLSG----PIPESFADLKNLRLLSLMYNEMSGTV 333
R+ LK + + G + + R + + + +
Sbjct: 293 AYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVI 352
Query: 334 PESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLR 368
+ ++ + L + +++L
Sbjct: 353 DQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELD 387
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 87.6 bits (217), Expect = 4e-18
Identities = 36/285 (12%), Positives = 73/285 (25%), Gaps = 29/285 (10%)
Query: 95 PLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154
++ F +L L+LS N + E + + + + N ++ +NL
Sbjct: 185 KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHF 242
Query: 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214
D N F ++ +V +A H D
Sbjct: 243 DLRGNGFH-CGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPA 301
Query: 215 AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESL 274
L + E QG+ + E N + +
Sbjct: 302 PFADRLIALKRKEHALLSGQGSET--------------------ERLECERENQARQREI 341
Query: 275 FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLR---LLSLMYNEMSG 331
+ Q + R +L+ L + L ++ E+
Sbjct: 342 DALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIELQH 401
Query: 332 TVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376
E L L + Y + + +N+ +R D+ +
Sbjct: 402 -ATEEQSPLQLLRAIV--KRYEEMYVEQQSVQNNAIRDWDMYQHK 443
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 1e-08
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 525 IPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLT 584
I E N + + ++ L ++ + + LDLS N LS A + L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 585 VLNVSFNDISGSIP 598
+LN+S N + ++
Sbjct: 62 LLNLSSNVLYETLD 75
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 3e-38
Identities = 63/280 (22%), Positives = 110/280 (39%), Gaps = 73/280 (26%)
Query: 715 GITVSVKKIEWGATR--IKIVSEF---ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
TV+VKK+ ++ +F I + +H+NL+ LLGF + L+Y Y+P
Sbjct: 54 NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMP 113
Query: 770 NGNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM 824
NG+L +++ W + KI G A G+ FLH + H D+K++NI+ DE
Sbjct: 114 NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAF 170
Query: 825 EPHLAEFGFKYLTQLADGSFPAKIAWTES---------GEF-YNAMKEEMYM-------- 866
+++FG A+ + + G Y A E +
Sbjct: 171 TAKISDFGL------------ARASEKFAQTVMTSRIVGTTAYMA-PE--ALRGEITPKS 215
Query: 867 DVYGFGEIILEILTNGRLTNAGSSLQN-----KP-----------IDGLLGEMYNENEVG 910
D+Y FG ++LEI+T + Q + ID + + + V
Sbjct: 216 DIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSV- 273
Query: 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950
+ + VA C + RP +++ +LL +
Sbjct: 274 ---------EAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 4e-38
Identities = 48/337 (14%), Positives = 110/337 (32%), Gaps = 27/337 (8%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
+L ++ + + + D +R H + N + +
Sbjct: 14 RENLYFQGSTALRPYHDVLSQWQRHYNADRNRW----HSAWRQANSNNPQIETRTGRALK 69
Query: 163 GSVPAEISQL--EHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGML 220
+ + L L P Q L+ + + L ++P +
Sbjct: 70 -ATADLLEDATQPGRVALELRSVPLPQ-FPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQF 126
Query: 221 KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ 280
+ + + N + +P + +++ ++ L I +P+ L++ N
Sbjct: 127 AGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVN- 184
Query: 281 LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340
L+SL L + +P S A+L+NL+ L + + +S + ++ L
Sbjct: 185 --------------LQSLRLEWTGIRS-LPASIANLQNLKSLKIRNSPLS-ALGPAIHHL 228
Query: 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNN 400
P LE L + + P G + L+ + + + ++P DI L KL L
Sbjct: 229 PKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCV 288
Query: 401 FTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLP 437
L ++ + + + + + + P
Sbjct: 289 NLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVARP 325
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 7e-37
Identities = 57/378 (15%), Positives = 121/378 (32%), Gaps = 71/378 (18%)
Query: 197 KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGAN 256
E L+ G+ L + + + + W+ N + Q G
Sbjct: 12 SGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRW----HSAWRQANSNNPQIETRTGRA 67
Query: 257 LSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADL 316
L + L + T+ +L+L L P+ L
Sbjct: 68 LK-ATADLLEDATQP----------------------GRVALELRSVPLPQ-FPDQAFRL 103
Query: 317 KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376
+L+ +++ + +P+++ Q LE L + N +LP ++ ++LR + +
Sbjct: 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACP 161
Query: 377 FNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQL 436
+P + S S +L LRLE +P + L
Sbjct: 162 ELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANL 205
Query: 437 PDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASAC 496
++ + + + + + I+ KLE ++ L P L+ C
Sbjct: 206 QNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRN-YPPIFGGRAPLKRLILKDC 263
Query: 497 NITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARL 556
+ NL T+P + +LE++DL + +P ++A+L
Sbjct: 264 S----------------------NLL-TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQL 300
Query: 557 PVLGVLDLSHNSLSGQIP 574
P ++ + + +
Sbjct: 301 PANCIILVPPHLQAQLDQ 318
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 2e-36
Identities = 57/282 (20%), Positives = 92/282 (32%), Gaps = 41/282 (14%)
Query: 90 ALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLR 149
A V L L QFP + F L+ L + I P +Q
Sbjct: 70 ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFA 127
Query: 150 NLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG---------SYFSGPIPSQFGSFKSLE 200
L L N ++PA I+ L L+ L++ S + +L+
Sbjct: 128 GLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQ 186
Query: 201 FLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260
L L + +PA + L+ + ++I + LS +
Sbjct: 187 SLRLEWTGIR-SLPASIANLQNLKSLKIRNS------------------------PLS-A 220
Query: 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD-NRLSGPIPESFADLKNL 319
+ + +L KLE L L P F LK L L D + L +P L L
Sbjct: 221 LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLT-LPLDIHRLTQL 279
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL 361
L L +P + QLP+ I+ + + L ++
Sbjct: 280 EKLDLRGCVNLSRLPSLIAQLPANCIILVPPH-LQAQLDQHR 320
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 2e-36
Identities = 59/313 (18%), Positives = 108/313 (34%), Gaps = 19/313 (6%)
Query: 145 IQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 204
L ++ +SQ + + + + + + +
Sbjct: 8 HHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNNPQIETR 63
Query: 205 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQ-GNIPWQLGNMSEVQYLDIAGANLSGSIPK 263
G L L + + P Q +S +Q++ I A L +P
Sbjct: 64 TGRALKA-TADLLEDATQPGRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLM-ELPD 121
Query: 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFA--------- 314
+ LE+L L RN L +P + + L+ L + +PE A
Sbjct: 122 TMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180
Query: 315 DLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVST 374
L NL+ L L + + ++P S+ L +L+ L I N+ S +L + KL +D+
Sbjct: 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRG 238
Query: 375 NNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFS 434
+ PP L +LIL + +L + + L +L L +P +
Sbjct: 239 CTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298
Query: 435 QLPDINYIDLSRN 447
QLP I + +
Sbjct: 299 QLPANCIILVPPH 311
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 4e-30
Identities = 45/367 (12%), Positives = 100/367 (27%), Gaps = 75/367 (20%)
Query: 235 GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTT 294
G+ + S + L G+ LS + + R W +
Sbjct: 2 GSSHHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNN 57
Query: 295 LKSLDLSDNRLSGPIPESFADLK--NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNY 352
+ + L + D L L + P+ +L L+ + I
Sbjct: 58 PQIETRTGRALKA-TADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAG 115
Query: 353 FSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNC 412
LP+ + + + L + ++ N +L S+++
Sbjct: 116 LM-ELPDTMQQFAGLETLTLARNPLR-------------------------ALPASIASL 149
Query: 413 SSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNP 472
+ L L + E+P + + L+ +
Sbjct: 150 NRLRELSIRACPELTELPEPLASTD---------------ASGEHQGLVNLQSLRLEWT- 193
Query: 473 KLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNC 532
+ +PA +L +L++ ++ + ++ +
Sbjct: 194 GIRS-LPASIANLQNLKSLKIRNSPLS------------------------ALGPAIHHL 228
Query: 533 VELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFND 592
+LE +DL + + P + L L L S +P + L L++
Sbjct: 229 PKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCV 288
Query: 593 ISGSIPS 599
+PS
Sbjct: 289 NLSRLPS 295
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 9e-36
Identities = 75/290 (25%), Positives = 110/290 (37%), Gaps = 83/290 (28%)
Query: 709 KAVLPTGITVSVKKIEWGATRIKIVS-----EFITRIGT---VRHKNLIRLLGFCYNRHQ 760
K VL G V++K R S EF T I T RH +L+ L+GFC R++
Sbjct: 57 KGVLRDGAKVALK-------RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109
Query: 761 AYLLYDYLPNGNL------SEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLK 814
L+Y Y+ NGNL S+ W + +I +G ARGL +LH I H D+K
Sbjct: 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVK 166
Query: 815 ASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTES---------GEF-YNAMKEEM 864
+ NI+ DEN P + +FG +K G Y + E
Sbjct: 167 SINILLDENFVPKITDFGI------------SKKGTELDQTHLSTVVKGTLGY--IDPEY 212
Query: 865 YM--------DVYGFGEIILEILTNGRLTN-------------AGSSLQNKPIDGL---- 899
++ DVY FG ++ E+L A S N ++ +
Sbjct: 213 FIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPN 272
Query: 900 LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 949
L + + + D A+ C + DRPSM + L L
Sbjct: 273 LADKIRPESL----------RKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 7e-35
Identities = 58/344 (16%), Positives = 123/344 (35%), Gaps = 22/344 (6%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
I L + + +E + K + ++ + + +
Sbjct: 12 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 71
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNFN 378
LL+L ++ + +++ L++ N LP ++ +N L + + N+ +
Sbjct: 72 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS 130
Query: 379 GSIPPDICSG-GVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLP 437
S+P I L L + +NN + +SL L+L N + + S +P
Sbjct: 131 -SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH---VDLSLIP 186
Query: 438 DINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACN 497
+ + ++S N + + +E + S+N + ++ L N
Sbjct: 187 SLFHANVSYNLL-----STLAIPIAVEELDASHN-SI-NVVRGPV--NVELTILKLQHNN 237
Query: 498 ITGNLPPFKSCKSISVIESHMNNLSGTIPESV-SNCVELERIDLANNKLIGSIPEVLARL 556
+T + + + ++ N L I LER+ ++NN+ + ++ +
Sbjct: 238 LT-DTAWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNR-LVALNLYGQPI 294
Query: 557 PVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG 600
P L VLDLSHN L + L L + N I ++
Sbjct: 295 PTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLS 336
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 6e-34
Identities = 69/364 (18%), Positives = 122/364 (33%), Gaps = 27/364 (7%)
Query: 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323
E L + + + + ++ L+L+D ++ +FA ++ L
Sbjct: 40 EDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLY 99
Query: 324 LMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL-GRNSKLRWVDVSTNNFNGSIP 382
+ +N + P +P L +L + N S SLP + KL + +S NN I
Sbjct: 100 MGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIE 157
Query: 383 PDICSG-GVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINY 441
D L L L SN T LS SL + N S + +
Sbjct: 158 DDTFQATTSLQNLQLSSNRLT---HVDLSLIPSLFHANVSYNLLS-----TLAIPIAVEE 209
Query: 442 IDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN 501
+D S N + +N +L + +N L + P L S +
Sbjct: 210 LDASHNSINV-VRGPVNV--ELTILKLQHN-NLTD-TAW-LLNYPGLVEVDLSYNELE-K 262
Query: 502 LPP--FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVL 559
+ F + + + N L + L+ +DL++N + + + L
Sbjct: 263 IMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNH-LLHVERNQPQFDRL 320
Query: 560 GVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSAYAGNPKLCG 619
L L HNS+ + + +L L +S ND + R + A + C
Sbjct: 321 ENLYLDHNSIV-TLK--LSTHHTLKNLTLSHNDWD-CNSLRALFRNVARPAVDDADQHCK 376
Query: 620 APLQ 623
Q
Sbjct: 377 IDYQ 380
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 3e-32
Identities = 77/432 (17%), Positives = 134/432 (31%), Gaps = 96/432 (22%)
Query: 142 PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 201
+Q + + E L + K++ S + SF+ +E
Sbjct: 14 DSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVEL 73
Query: 202 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261
L+L + + I +Q L + + +
Sbjct: 74 LNLNDLQIEE-IDTYA-----------------------FAYAHTIQKLYMGFNAIR-YL 108
Query: 262 PKE-LSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
P N+ L L L RN L+ +P F L +L +S+N L ++F +L
Sbjct: 109 PPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSL 167
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379
+ L L N ++ V SL +PSL + N S L + +D S N+ N
Sbjct: 168 QNLQLSSNRLT-HVDLSL--IPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN- 218
Query: 380 SIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLK-FSQLPD 438
+ + L L L NN T + L N LV + L N +I F ++
Sbjct: 219 VVRGPVNVE--LTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQR 273
Query: 439 INYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNI 498
+ + +S N + L+ ++S+N ++
Sbjct: 274 LERLYISNNRLV-ALNLYGQPIPTLKVLDLSHN-------------------------HL 307
Query: 499 TGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPV 558
+ + LE + L +N I ++ L+
Sbjct: 308 L------------------------HVERNQPQFDRLENLYLDHNS-IVTLK--LSTHHT 340
Query: 559 LGVLDLSHNSLS 570
L L LSHN
Sbjct: 341 LKNLTLSHNDWD 352
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 1e-31
Identities = 63/375 (16%), Positives = 120/375 (32%), Gaps = 48/375 (12%)
Query: 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
D+++ + F E L + + + + S R + +L+
Sbjct: 21 CVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQ 80
Query: 161 FSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ + ++ L + + P F + L L L N L+ +P +
Sbjct: 81 IE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGI-- 136
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFR 278
N ++ L ++ NL I + T L++L L
Sbjct: 137 ---------------------FHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSS 174
Query: 279 NQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338
N+L V S + +L ++S N LS + A + L +N ++ V +
Sbjct: 175 NRLT-HVD--LSLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRGPV- 224
Query: 339 QLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILF 397
L IL + +N + L L VD+S N I L +L +
Sbjct: 225 -NVELTILKLQHNNLT-DTA-WLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYIS 280
Query: 398 SNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDI 457
+N +L+ +L L L N + Q + + L N +
Sbjct: 281 NNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLST 337
Query: 458 NQASKLEYFNVSNNP 472
+ L+ +S+N
Sbjct: 338 H--HTLKNLTLSHND 350
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 2e-31
Identities = 58/349 (16%), Positives = 121/349 (34%), Gaps = 24/349 (6%)
Query: 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSG 139
++ + + + I N + +++ + P + + + L+++
Sbjct: 25 DVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEE 83
Query: 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKS 198
+ L N+ +P + + L VL L + S F +
Sbjct: 84 IDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPK 142
Query: 199 LEFLHLAGNLLNDQIPAELGM-LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257
L L ++ N L +I + ++ ++++ N ++ L + + + +++ L
Sbjct: 143 LTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT-HVD--LSLIPSLFHANVSYNLL 198
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317
S L+ +E L N + L L L N L+ +
Sbjct: 199 S-----TLAIPIAVEELDASHNSINVVRGPVNVE---LTILKLQHNNLT-DTA-WLLNYP 248
Query: 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNF 377
L + L YNE+ + V++ LE L+I NN +L L+ +D+S N+
Sbjct: 249 GLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHL 307
Query: 378 NGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFS 426
+ + L L L N+ +L S +L L L N +
Sbjct: 308 L-HVERNQPQFDRLENLYLDHNSIV-TLKL--STHHTLKNLTLSHNDWD 352
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-34
Identities = 64/330 (19%), Positives = 120/330 (36%), Gaps = 27/330 (8%)
Query: 101 NELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
N ++ +S Q + + ++ LD+S N S + L +L+ SN
Sbjct: 10 NRYKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
++ L L+ L+L +Y + S+E LH A N ++ +
Sbjct: 69 VLYE--TLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNISR-VSCSR-- 118
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG-SIPKELSNLTKLESLFLFR 278
+ ++ + N G S VQYLD+ + + + ++ LE L L
Sbjct: 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178
Query: 279 NQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338
N + LK+LDLS N+L+ + F + +SL N++ + ++L
Sbjct: 179 NFIYDVKGQVV--FAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALR 234
Query: 339 QLPSLEILFIWNNYFS-GSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILF 397
+LE + N F G+L + +N +++ V T + C+ L
Sbjct: 235 FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHY--- 291
Query: 398 SNNFTGSLSPSLSNCSSLVRLR-LEDNSFS 426
+ P+ RL L +
Sbjct: 292 -GAYCCEDLPA----PFADRLIALGHHHHH 316
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 6e-33
Identities = 45/322 (13%), Positives = 100/322 (31%), Gaps = 17/322 (5%)
Query: 120 EIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178
EI N ++ ++ QS N+ LD N S A+++ L++L
Sbjct: 4 EIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELL 63
Query: 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238
NL+ + + S +L L L N + EL + ++ + N +
Sbjct: 64 NLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RVS 115
Query: 239 WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG-QVPWEFSRVTTLKS 297
+ + +A ++ + ++++ L L N++ + TL+
Sbjct: 116 --CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEH 173
Query: 298 LDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL 357
L+L N + + L+ L L N+++ + + + + NN +
Sbjct: 174 LNLQYNFIYD-VKGQ-VVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LI 229
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVR 417
+ L + L D+ N F+ + + C+
Sbjct: 230 EKALRFSQNLEHFDLRGNGFH-CGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTL 288
Query: 418 LRLEDNSFSGEIPLKFSQLPDI 439
+L +
Sbjct: 289 GHYGAYCCEDLPAPFADRLIAL 310
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 9e-32
Identities = 51/309 (16%), Positives = 112/309 (36%), Gaps = 17/309 (5%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
++ K+ + S + S S +++ L L+GN L+ A+L +
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG 283
+ + N L ++S ++ LD+ + EL +E+L N ++
Sbjct: 61 ELLNLSSNVLY-ETL-DLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS- 112
Query: 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG-TVPESLVQLPS 342
+V SR K++ L++N+++ ++ L L NE+ E +
Sbjct: 113 RVS--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170
Query: 343 LEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402
LE L + N+ + + +KL+ +D+S+N + P+ S + + L +N
Sbjct: 171 LEHLNLQYNFIY-DVKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV 227
Query: 403 GSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASK 462
+ +L +L L N F L+ + +++ + +
Sbjct: 228 -LIEKALRFSQNLEHFDLRGNGFH-CGTLRDFFSKNQRVQTVAKQTVK-KLTGQNEEECT 284
Query: 463 LEYFNVSNN 471
+
Sbjct: 285 VPTLGHYGA 293
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 4e-31
Identities = 55/336 (16%), Positives = 95/336 (28%), Gaps = 64/336 (19%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
+I + N + + + + L + +K LDLS N LS A L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379
LL+L N + L L +L L + NNY L + + + NN +
Sbjct: 61 ELLNLSSNVLYE--TLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS- 112
Query: 380 SIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDI 439
+ + L +N + L +
Sbjct: 113 RVSCSR--------------------------GQGKKNIYLANNKITMLRDLDEGCRSRV 146
Query: 440 NYIDLSRNGFTG-GIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNI 498
Y+DL N + LE+ N+ N I
Sbjct: 147 QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN-------------------------FI 181
Query: 499 TGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPV 558
++ + ++ N L+ + + + I L NNKL+ I + L
Sbjct: 182 Y-DVKGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQN 238
Query: 559 LGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDIS 594
L DL N + + V V+ +
Sbjct: 239 LEHFDLRGNGFH-CGTLRDFFSKNQRVQTVAKQTVK 273
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-29
Identities = 48/310 (15%), Positives = 112/310 (36%), Gaps = 17/310 (5%)
Query: 189 IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ 248
I + + + + L + + V +++ N L ++++
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 249 YLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGP 308
L+++ L +L +L+ L +L L N + E ++++L ++N +S
Sbjct: 62 LLNLSSNVLY-ETL-DLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISR- 113
Query: 309 IPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG-SLPENLGRNSKL 367
+ S + + + L N+++ ++ L + N + E + L
Sbjct: 114 VSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTL 171
Query: 368 RWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSG 427
+++ N + + L L L SN + P + + + + L +N
Sbjct: 172 EHLNLQYNFIY-DVKGQVVFAK-LKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV- 227
Query: 428 EIPLKFSQLPDINYIDLSRNGFTGGIPTDIN-QASKLEYFNVSNNPKLGGMIPAQTWSLP 486
I ++ + DL NGF G D + +++ KL G + ++P
Sbjct: 228 LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQ-NEEECTVP 286
Query: 487 SLQNFSASAC 496
+L ++ A C
Sbjct: 287 TLGHYGAYCC 296
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-29
Identities = 57/332 (17%), Positives = 114/332 (34%), Gaps = 27/332 (8%)
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
N + + + ++L ++ + ++ L L N L+ + + T L+ L+LS
Sbjct: 8 NGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSS 67
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362
N L + L LR L L N + L+ PS+E L NN S + + G
Sbjct: 68 NVLYETLD--LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RVSCSRG 119
Query: 363 RNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG-SLSPSLSNCSSLVRLRLE 421
+ + + ++ N D + L L N + + ++ +L L L+
Sbjct: 120 QG--KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177
Query: 422 DNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQ 481
N ++ + +DLS N + + A+ + + ++ NN KL +I
Sbjct: 178 YNFIY-DVK-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNN-KL-VLIEKA 232
Query: 482 TWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLA 541
+L++F C ++ S + ++V +
Sbjct: 233 LRFSQNLEHFDLRGNGF--------HCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECT 284
Query: 542 NNKLIGSIPEVLARLP---VLGVLDLSHNSLS 570
L LP ++ L H+
Sbjct: 285 VPTLGHYGAYCCEDLPAPFADRLIALGHHHHH 316
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 1e-16
Identities = 29/208 (13%), Positives = 69/208 (33%), Gaps = 11/208 (5%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG-HFPGGIQSLRNLLVLDAFS 158
++ L++N + ++ + + LD+ N +F S L L+
Sbjct: 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178
Query: 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
N V ++ LK L+L+ + + + +F S + ++ L N L I L
Sbjct: 179 NFIY-DVKGQV-VFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALR 234
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFR 278
+ + H ++ N + G + + + ++ K+L+ + E
Sbjct: 235 FSQNLEHFDLRGN------GFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTL 288
Query: 279 NQLAGQVPWEFSRVTTLKSLDLSDNRLS 306
+ + + L +
Sbjct: 289 GHYGAYCCEDLPAPFADRLIALGHHHHH 316
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 4e-09
Identities = 20/124 (16%), Positives = 41/124 (33%), Gaps = 4/124 (3%)
Query: 95 PLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154
++ F +L L+LS N + E + + + + N ++ +NL
Sbjct: 185 KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHF 242
Query: 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214
D N F ++ +V +A + Q ++ L G + +P
Sbjct: 243 DLRGNGFH-CGTLRDFFSKNQRVQTVAKQTVKK-LTGQNEEECTVPTLGHYGAYCCEDLP 300
Query: 215 AELG 218
A
Sbjct: 301 APFA 304
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 6e-33
Identities = 59/349 (16%), Positives = 123/349 (35%), Gaps = 22/349 (6%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
I L + + +E + K + ++ + + +
Sbjct: 18 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 77
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNFN 378
LL+L ++ + +++ L++ N LP ++ +N L + + N+ +
Sbjct: 78 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS 136
Query: 379 GSIPPDICSG-GVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLP 437
S+P I L L + +NN + +SL L+L N + + S +P
Sbjct: 137 -SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVD--LSLIP 192
Query: 438 DINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACN 497
+ + ++S N + + +E + S+N ++ L N
Sbjct: 193 SLFHANVSYNLL-----STLAIPIAVEELDASHNSI--NVVRGPV--NVELTILKLQHNN 243
Query: 498 ITGNLPPFKSCKSISVIESHMNNLSGTIPESV-SNCVELERIDLANNKLIGSIPEVLARL 556
+T + + + ++ N L I LER+ ++NN+ + ++ +
Sbjct: 244 LT-DTAWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNR-LVALNLYGQPI 300
Query: 557 PVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRL 605
P L VLDLSHN L + L L + N I ++ L
Sbjct: 301 PTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHTL 347
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 2e-30
Identities = 76/431 (17%), Positives = 132/431 (30%), Gaps = 94/431 (21%)
Query: 142 PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 201
+Q + + E L + K++ S + SF+ +E
Sbjct: 20 DSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVEL 79
Query: 202 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261
L+L + + I +Q L + + +
Sbjct: 80 LNLNDLQIEE-IDTYA-----------------------FAYAHTIQKLYMGFNAIR-YL 114
Query: 262 PKE-LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLR 320
P N+ L L L RN L+ F L +L +S+N L ++F +L+
Sbjct: 115 PPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQ 174
Query: 321 LLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGS 380
L L N ++ V SL +PSL + N S L + +D S N+ N
Sbjct: 175 NLQLSSNRLT-HVDLSL--IPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-V 225
Query: 381 IPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLK-FSQLPDI 439
+ + L L L NN T + L N LV + L N +I F ++ +
Sbjct: 226 VRGPVNVE--LTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRL 280
Query: 440 NYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNIT 499
+ +S N + L+ ++S+N ++
Sbjct: 281 ERLYISNNRLV-ALNLYGQPIPTLKVLDLSHN-------------------------HLL 314
Query: 500 GNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVL 559
+ + LE + L +N I ++ L+ L
Sbjct: 315 ------------------------HVERNQPQFDRLENLYLDHNS-IVTLK--LSTHHTL 347
Query: 560 GVLDLSHNSLS 570
L LSHN
Sbjct: 348 KNLTLSHNDWD 358
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 3e-30
Identities = 58/349 (16%), Positives = 121/349 (34%), Gaps = 24/349 (6%)
Query: 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSG 139
++ + + + I N + +++ + P + + + L+++
Sbjct: 31 DVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEE 89
Query: 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKS 198
+ L N+ +P + + L VL L + S F +
Sbjct: 90 IDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPK 148
Query: 199 LEFLHLAGNLLNDQIPAELGM-LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257
L L ++ N L +I + ++ ++++ N ++ L + + + +++ L
Sbjct: 149 LTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT-HVD--LSLIPSLFHANVSYNLL 204
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317
S L+ +E L N + L L L N L+ +
Sbjct: 205 S-----TLAIPIAVEELDASHNSINVVRGPVNVE---LTILKLQHNNLT-DTA-WLLNYP 254
Query: 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNF 377
L + L YNE+ + V++ LE L+I NN +L L+ +D+S N+
Sbjct: 255 GLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHL 313
Query: 378 NGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFS 426
+ + L L L N+ + LS +L L L N +
Sbjct: 314 L-HVERNQPQFDRLENLYLDHNSIV---TLKLSTHHTLKNLTLSHNDWD 358
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 125 bits (314), Expect = 8e-30
Identities = 77/495 (15%), Positives = 173/495 (34%), Gaps = 60/495 (12%)
Query: 118 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLK 176
+ + I +F +L N ++ +++ +PA + ++
Sbjct: 20 DSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVE 78
Query: 177 VLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN 236
+LNL F +++ L++ N + +P +
Sbjct: 79 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAI-RYLPPHV------------------- 118
Query: 237 IPWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPWE-FSRVTT 294
N+ + L + +LS S+P+ + N KL +L + N L ++ + F T+
Sbjct: 119 ----FQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTS 172
Query: 295 LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS 354
L++L LS NRL+ + + + +L ++ YN +S +L ++E L +N +
Sbjct: 173 LQNLQLSSNRLTH-VD--LSLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN 224
Query: 355 GSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSP-SLSNCS 413
+ + N +L + + NN + + + L ++ L N +
Sbjct: 225 -VVRGPV--NVELTILKLQHNNL--TDTAWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQ 278
Query: 414 SLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPK 473
L RL + +N + L +P + +DLS N + + Q +LE + +N
Sbjct: 279 RLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHN-S 335
Query: 474 LGGMIPAQTWSLPSLQNFSASACNITGN--LPPFKSCKSISVIESHMNNLSGTIPESVSN 531
+ + T +L+N + S + N F++ +V ++ + E
Sbjct: 336 I-VTLKLST--HHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKIDYQLEHGLC 392
Query: 532 CVELER-------IDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLT 584
C E ++ +A ++ + R ++ +
Sbjct: 393 CKESDKPYLDRLLQYIALTSVVEKVQRAQGRCSATDTINSVQSLSHYITQQGGVPLQGNE 452
Query: 585 VLNVSFNDISGSIPS 599
L N++ +
Sbjct: 453 QLEAEVNELRAEVQQ 467
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-31
Identities = 69/372 (18%), Positives = 131/372 (35%), Gaps = 39/372 (10%)
Query: 234 QGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVT 293
Q ++ + LD ++++ + + LT L L N + + S+ T
Sbjct: 31 QATDTISEEQLATLTSLDCHNSSIT-DMT-GIEKLTGLTKLICTSNNITTL---DLSQNT 85
Query: 294 TLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
L L N+L+ L L L+ N+++ + S Q P L L N
Sbjct: 86 NLTYLACDSNKLTNL---DVTPLTKLTYLNCDTNKLT-KLDVS--QNPLLTYLNCARNTL 139
Query: 354 SGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCS 413
+ + + N++L +D N D+ L L N T +S
Sbjct: 140 T-EID--VSHNTQLTELDCHLNKK--ITKLDVTPQTQLTTLDCSFNKIT---ELDVSQNK 191
Query: 414 SLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPK 473
L RL + N+ + L +Q + ++D S N T D+ ++L YF+ S NP
Sbjct: 192 LLNRLNCDTNNITK---LDLNQNIQLTFLDCSSNKLTE---IDVTPLTQLTYFDCSVNPL 245
Query: 474 LGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCV 533
+ +L L ++ + + + I + V++
Sbjct: 246 --TELDV--STLSKLTTLHCIQTDLL-EIDLTHNTQLIYFQAEGCRKIK---ELDVTHNT 297
Query: 534 ELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDI 593
+L +D + + L++ P L L L++ L+ ++ + L L+ I
Sbjct: 298 QLYLLDCQAAGIT-ELD--LSQNPKLVYLYLNNTELT-ELD--VSHNTKLKSLSCVNAHI 351
Query: 594 SGSIPSGKVLRL 605
GK+ L
Sbjct: 352 QDFSSVGKIPAL 363
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 2e-29
Identities = 76/451 (16%), Positives = 153/451 (33%), Gaps = 73/451 (16%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
F V + + L +L SLD ++ + GI+ L L L SN
Sbjct: 20 FASEVAAAFEMQATD---TISEEQLATLTSLDCHNSSIT-DMT-GIEKLTGLTKLICTSN 74
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ + ++ +SQ +L L + + + L +L+ N L
Sbjct: 75 NIT-TLD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLT--------- 119
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
+ + + YL+ A L+ I +S+ T+L L N
Sbjct: 120 ----------------KLD--VSQNPLLTYLNCARNTLT-EID--VSHNTQLTELDCHLN 158
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
+ + + T L +LD S N+++ + K L L+ N ++ + L Q
Sbjct: 159 KKIT--KLDVTPQTQLTTLDCSFNKITE---LDVSQNKLLNRLNCDTNNIT-KLD--LNQ 210
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399
L L +N + + + ++L + D S N + S L L
Sbjct: 211 NIQLTFLDCSSNKLT-EID--VTPLTQLTYFDCSVNPLT-ELDVSTLSK--LTTLHCIQT 264
Query: 400 NFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQ 459
+ + L++ + L+ + E E+ + + + +D G T D++Q
Sbjct: 265 DLL-EI--DLTHNTQLIYFQAEGCRKIKELDV--THNTQLYLLDCQAAGIT---ELDLSQ 316
Query: 460 ASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMN 519
KL Y ++N +L + L++ S +I + +++
Sbjct: 317 NPKLVYLYLNNT-EL-TELDVS--HNTKLKSLSCVNAHIQ-DFSSVGKIPALNNNFEAEG 371
Query: 520 NLSGTIPESVSN-----CVELERIDLANNKL 545
E+++N V + +D N +
Sbjct: 372 QTITMPKETLTNNSLTIAVSPDLLDQFGNPM 402
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 2e-28
Identities = 73/452 (16%), Positives = 142/452 (31%), Gaps = 71/452 (15%)
Query: 135 NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFG 194
+F+ FP + + + F + ++ QL L L+ S + +
Sbjct: 9 QSFNDWFPD--DNFASEVAAA-FEMQATDTIS--EEQLATLTSLDCHNSSITD--MTGIE 61
Query: 195 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAG 254
L L N + +L +T++ N N+ + ++++ YL+
Sbjct: 62 KLTGLTKLICTSNNITTL---DLSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDT 115
Query: 255 ANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFA 314
L+ + +S L L RN L + S T L LD N+ +
Sbjct: 116 NKLT-KLD--VSQNPLLTYLNCARNTLT---EIDVSHNTQLTELDCHLNKKITKLD--VT 167
Query: 315 DLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVST 374
L L +N+++ + Q L L N + L L +N +L ++D S+
Sbjct: 168 PQTQLTTLDCSFNKITE---LDVSQNKLLNRLNCDTNNIT-KLD--LNQNIQLTFLDCSS 221
Query: 375 NNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFS 434
N I ++ + L N + L S
Sbjct: 222 NKLT-EID--------------------------VTPLTQLTYFDCSVNPLT---ELDVS 251
Query: 435 QLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSAS 494
L + + + D+ ++L YF K+ L
Sbjct: 252 TLSKLTTLHCIQTDLLE---IDLTHNTQLIYFQAEGCRKI---KELDVTHNTQLYLLDCQ 305
Query: 495 ACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLA 554
A IT L + + + L+ + VS+ +L+ + N I +
Sbjct: 306 AAGIT-EL-DLSQNPKLVYLYLNNTELT-ELD--VSHNTKLKSLSCVNAH-IQDFSS-VG 358
Query: 555 RLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVL 586
++P L + +P + + +SLT+
Sbjct: 359 KIPALNNNFEAEGQTI-TMPKETLTNNSLTIA 389
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-24
Identities = 65/430 (15%), Positives = 135/430 (31%), Gaps = 44/430 (10%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
L L + N+ + +++ T+L L N + + + L L L+ +N
Sbjct: 63 LTGLTKLICTSNNITT---LDLSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTN 116
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ ++SQ L LN A + + I L L N ++ +
Sbjct: 117 KLT---KLDVSQNPLLTYLNCARNTLT-EID--VSHNTQLTELDCHLNKKITKLD--VTP 168
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
+T ++ +N + + + L+ N++ + L+ +L L N
Sbjct: 169 QTQLTTLDCSFNKIT-ELD--VSQNKLLNRLNCDTNNIT-KLD--LNQNIQLTFLDCSSN 222
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
+L ++ + +T L D S N L+ + S L L L + ++ L
Sbjct: 223 KLT-EID--VTPLTQLTYFDCSVNPLT-ELDVS--TLSKLTTLHCIQTDLLEI---DLTH 273
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399
L L ++ N++L +D + L L L +
Sbjct: 274 NTQLIYFQAEGCRKIKEL--DVTHNTQLYLLDCQAAGIT-ELDLSQNPK--LVYLYLNNT 328
Query: 400 NFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQ 459
T L +S+ + L L + + ++P +N + +P +
Sbjct: 329 ELT-EL--DVSHNTKLKSLSCVNAHIQ-DFSS-VGKIPALNNNFEAEGQTI-TMPKETLT 382
Query: 460 ASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNIT-GNLPPFKSCKSISVIESHM 518
+ L + G + + IT NL + + +
Sbjct: 383 NNSLTIAVSPDLLDQFGNPM--NIEPGDGGVYDQATNTITWENLSTDNPAVTYTFTSEN- 439
Query: 519 NNLSGTIPES 528
+ GT+
Sbjct: 440 GAIVGTVTTP 449
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 1e-23
Identities = 52/354 (14%), Positives = 111/354 (31%), Gaps = 51/354 (14%)
Query: 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330
S ++ ++ TL SLD ++ ++ + L L L N ++
Sbjct: 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD-MTG-IEKLTGLTKLICTSNNIT 77
Query: 331 GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV 390
L Q +L L +N + +L + +KL +++ TN +
Sbjct: 78 TL---DLSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKLT-KLDVSQNPL-- 128
Query: 391 LFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFT 450
L L N T +S+ + L L N ++ + + +D S N T
Sbjct: 129 LTYLNCARNTLT---EIDVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKIT 183
Query: 451 GGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNIT----GNLP--- 503
D++Q L N N + + Q L S+ +T L
Sbjct: 184 E---LDVSQNKLLNRLNCDTN-NITKLDLNQ---NIQLTFLDCSSNKLTEIDVTPLTQLT 236
Query: 504 ------------PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPE 551
+ ++ + +L I +++ +L + I +
Sbjct: 237 YFDCSVNPLTELDVSTLSKLTTLHCIQTDLL-EID--LTHNTQLIYFQAEGCRKIKELD- 292
Query: 552 VLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRL 605
+ L +LD ++ ++ L L ++ +++ + +L
Sbjct: 293 -VTHNTQLYLLDCQAAGIT-ELD--LSQNPKLVYLYLNNTELT-ELDVSHNTKL 341
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 5e-20
Identities = 60/287 (20%), Positives = 110/287 (38%), Gaps = 29/287 (10%)
Query: 308 PIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKL 367
+ F D N EM T S QL +L L N+ + + + + + L
Sbjct: 10 SFNDWFPD-DNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSIT-DMTG-IEKLTGL 66
Query: 368 RWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSG 427
+ ++NN ++ + L L SN T + ++ + L L + N +
Sbjct: 67 TKLICTSNNIT-TLDLSQNTN--LTYLACDSNKLT---NLDVTPLTKLTYLNCDTNKLT- 119
Query: 428 EIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPS 487
L SQ P + Y++ +RN T D++ ++L + N K+
Sbjct: 120 --KLDVSQNPLLTYLNCARNTLT---EIDVSHNTQLTELDCHLNKKIT---KLDVTPQTQ 171
Query: 488 LQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIG 547
L S IT L K ++ + NN++ + ++ ++L +D ++NKL
Sbjct: 172 LTTLDCSFNKIT-EL-DVSQNKLLNRLNCDTNNIT-KLD--LNQNIQLTFLDCSSNKLT- 225
Query: 548 SIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDIS 594
I + L L D S N L+ ++ + S LT L+ D+
Sbjct: 226 EID--VTPLTQLTYFDCSVNPLT-ELD--VSTLSKLTTLHCIQTDLL 267
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 2e-30
Identities = 76/353 (21%), Positives = 125/353 (35%), Gaps = 70/353 (19%)
Query: 248 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307
L++ + L+ ++P L + +L + N L +P L++L++S N+L+
Sbjct: 43 AVLNVGESGLT-TLPDCL--PAHITTLVIPDNNLT-SLPALPPE---LRTLEVSGNQLTS 95
Query: 308 PIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP-SLEILFIWNNYFSGSLPENLGRNSK 366
+P L L + S L LP L L+I+ N + SLP
Sbjct: 96 -LPVLPPGLLELSIFSNPLT--------HLPALPSGLCKLWIFGNQLT-SLPVLPP---G 142
Query: 367 LRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFS 426
L+ + VS N S+P L KL ++N T SL S L L + DN +
Sbjct: 143 LQELSVSDNQLA-SLPALPSE---LCKLWAYNNQLT-SLPMLPSG---LQELSVSDNQLA 194
Query: 427 GEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLP 486
+P S+L + N T +P S L+ VS N +L +P
Sbjct: 195 -SLPTLPSELY---KLWAYNNRLTS-LPALP---SGLKELIVSGN-RLTS-LPV---LPS 241
Query: 487 SLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLI 546
L+ S +T ++P S L + + N+L
Sbjct: 242 ELKELMVSGNRLT------------------------SLPMLPSG---LLSLSVYRNQLT 274
Query: 547 GSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPS 599
+PE L L ++L N LS + +S + + S
Sbjct: 275 -RLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGAS 326
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 1e-26
Identities = 63/327 (19%), Positives = 105/327 (32%), Gaps = 43/327 (13%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
EL L +S N + PV L L + L L F N
Sbjct: 80 PPELRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLTHLP-------ALPSGLCKLWIFGN 131
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ S+P L+ L V + + +P+ L L N L +P
Sbjct: 132 QLT-SLPVLPPGLQELSVSDNQLAS----LPALPS---ELCKLWAYNNQLT-SLPMLPSG 182
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L + + N ++P + L L+ S+P S L +L + N
Sbjct: 183 L---QELSVSDNQLA-SLPTLPSEL---YKLWAYNNRLT-SLPALPSGLKELI---VSGN 231
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
+L +P S LK L +S NRL+ +P L LS+ N+++ +PESL+
Sbjct: 232 RL-TSLPVLPSE---LKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIH 282
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399
L S + + N S R ++ + S + + +
Sbjct: 283 LSSETTVNLEGNPLS-ERTLQALR--EITSAPGYSGPII-RFDMAGASAPRETRALHLAA 338
Query: 400 N--FTGSLSPSLSNCSSLVRLRLEDNS 424
+ + EDN+
Sbjct: 339 ADWLVPAREGEPAPADRWHMFGQEDNA 365
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 93.8 bits (233), Expect = 7e-20
Identities = 46/279 (16%), Positives = 91/279 (32%), Gaps = 40/279 (14%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
L +L++S N + P L L N + P L+ L N
Sbjct: 140 PPGLQELSVSDNQLA-SLPALPSELCKL---WAYNNQLT-SLPMLPSGLQEL---SVSDN 191
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ S+P S+L L N + +P+ L+ L ++GN L +P
Sbjct: 192 QLA-SLPTLPSELYKLWAYNNRLTS----LPALPSG---LKELIVSGNRLT-SLPVLPSE 242
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L + + N ++P + L + L+ +P+ L +L+ ++ L N
Sbjct: 243 L---KELMVSGNRLT-SLPMLPSGL---LSLSVYRNQLT-RLPESLIHLSSETTVNLEGN 294
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLS------GPIPESFADLKNLRLLSLMYNEMSGTV 333
L+ + + R + S + P L L+
Sbjct: 295 PLS-ERTLQALR--EITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPA 351
Query: 334 P----ESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLR 368
P Q + + ++ + S + EN +++ +
Sbjct: 352 PADRWHMFGQEDNADAFSLFLDRLSET--ENFIKDAGFK 388
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 73.8 bits (181), Expect = 1e-13
Identities = 42/243 (17%), Positives = 76/243 (31%), Gaps = 52/243 (21%)
Query: 363 RNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLED 422
N+ ++V + ++P + + + L++ NN T SL L L +
Sbjct: 38 LNNGNAVLNVGESGLT-TLPDCLPAH--ITTLVIPDNNLT-SLPALPPE---LRTLEVSG 90
Query: 423 NSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQT 482
N + +P+ L +++ S L + N +L +P
Sbjct: 91 NQLT-SLPVLPPGLLELSIFSNPLTHLP-------ALPSGLCKLWIFGN-QLTS-LPV-- 138
Query: 483 WSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLAN 542
P LQ S S + ++P S +L N
Sbjct: 139 -LPPGLQELSVSDNQLA------------------------SLPALPSELCKL---WAYN 170
Query: 543 NKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKV 602
N+L S+P + + L L +S N L+ +P L N + K
Sbjct: 171 NQLT-SLPMLPSGL---QELSVSDNQLA-SLPTLPSELYKLWAYNNRLTSLPALPSGLKE 225
Query: 603 LRL 605
L +
Sbjct: 226 LIV 228
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 4e-30
Identities = 53/296 (17%), Positives = 104/296 (35%), Gaps = 86/296 (29%)
Query: 715 GITVSVKKIEWGATRIKIVSEF-ITRIGTVRHKNLIRLLGFC----YNRHQAYLLYDYLP 769
V+VK + +E+ + + ++H+N+++ +G +L+ +
Sbjct: 47 NEYVAVKIFPIQDKQ-SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHE 105
Query: 770 NGNLSEKIRTKR-DWAAKYKIVLGVARGLCFLHHDCY-------PAIPHGDLKASNIVFD 821
G+LS+ ++ W I +ARGL +LH D PAI H D+K+ N++
Sbjct: 106 KGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK 165
Query: 822 ENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEM----YM----------- 866
N+ +A+FG A E+G+ ++ YM
Sbjct: 166 NNLTACIADFGL------------ALK--FEAGKSAGDTHGQVGTRRYMAPEVLEGAINF 211
Query: 867 --------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGE--MYNENEVGSSSSLQ 916
D+Y G ++ E+ + + DG + E + E E+G SL+
Sbjct: 212 QRDAFLRIDMYAMGLVLWELAS-----------RCTAADGPVDEYMLPFEEEIGQHPSLE 260
Query: 917 DEIKLVL----------------------DVALLCTRSTPSDRPSMEEALKLLSGL 950
D ++V+ + C R S + ++ +
Sbjct: 261 DMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 1e-29
Identities = 64/308 (20%), Positives = 116/308 (37%), Gaps = 10/308 (3%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
E L+L N E + L L+++ N S PG +L NL L S
Sbjct: 30 IPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89
Query: 159 NSFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE- 216
N +P + + L +L L+++ + + F +L+ L + N L I
Sbjct: 90 NRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV-YISHRA 147
Query: 217 LGMLKTVTHMEIGYNFYQGNIPWQ-LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLF 275
L ++ + + +IP + L ++ + L + N++ L +L+ L
Sbjct: 148 FSGLNSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 206
Query: 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 335
+ + L SL ++ L+ + L LR L+L YN +S
Sbjct: 207 ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGS 266
Query: 336 SLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNFNGSIPPDICSG-GVLFK 393
L +L L+ + + + + R + LR ++VS N ++ + G L
Sbjct: 267 MLHELLRLQEIQLVGGQLA-VVEPYAFRGLNYLRVLNVSGNQLT-TLEESVFHSVGNLET 324
Query: 394 LILFSNNF 401
LIL SN
Sbjct: 325 LILDSNPL 332
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 2e-29
Identities = 74/384 (19%), Positives = 138/384 (35%), Gaps = 70/384 (18%)
Query: 245 SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304
++ + + ++P+ + T+ L L +N++ EF+ L+ L+L++N
Sbjct: 11 AQDRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENI 67
Query: 305 LSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN 364
+S P +F +L NLR L L N + L +L L I N L
Sbjct: 68 VSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDL 127
Query: 365 SKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDN 423
L+ ++V N+ I SG L +L L N T + +LS+ L+ LRL
Sbjct: 128 YNLKSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL 186
Query: 424 SFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTW 483
+ + F +L + +++S + + + L ++++
Sbjct: 187 NINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHC------------ 234
Query: 484 SLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANN 543
+++ + +V + V L ++L+ N
Sbjct: 235 --------------------------NLTAVP----------YLAVRHLVYLRFLNLSYN 258
Query: 544 KLIGSIPE-VLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG-- 600
I +I +L L L + L L+ P F + L VLNVS N ++ ++
Sbjct: 259 P-ISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT-TLEESVF 316
Query: 601 ------KVLRLMGSSAYAGNPKLC 618
+ L L NP C
Sbjct: 317 HSVGNLETLIL------DSNPLAC 334
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 5e-28
Identities = 65/334 (19%), Positives = 124/334 (37%), Gaps = 37/334 (11%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
+VP I ++L+L + +F SF LE L L N+++ +
Sbjct: 25 AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSA-VEPGA------ 75
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLA 282
N+ ++ L + L IP + L+ L L + N++
Sbjct: 76 -----------------FNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIV 117
Query: 283 GQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
+ F + LKSL++ DN L +F+ L +L L+L ++ E+L L
Sbjct: 118 -ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLH 176
Query: 342 SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNF 401
L +L + + + + R +L+ +++S + ++ P+ G L L + N
Sbjct: 177 GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNL 236
Query: 402 TGSLSP-SLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDI-NQ 459
T ++ ++ + L L L N S +L + I L +
Sbjct: 237 T-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLA-VVEPYAFRG 294
Query: 460 ASKLEYFNVSNNPKLGGMIPAQT-WSLPSLQNFS 492
+ L NVS N +L + S+ +L+
Sbjct: 295 LNYLRVLNVSGN-QL-TTLEESVFHSVGNLETLI 326
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 2e-15
Identities = 39/206 (18%), Positives = 67/206 (32%), Gaps = 28/206 (13%)
Query: 103 LVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
L L L + + P E +L LI L + N + + L L VL+ +
Sbjct: 154 LEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY 212
Query: 162 SGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLK 221
++ +L L++ + L FL+L+ N + I +
Sbjct: 213 LDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPI-STIEGSM---- 267
Query: 222 TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQ 280
L + +Q + + G L+ + L L L + NQ
Sbjct: 268 -------------------LHELLRLQEIQLVGGQLA-VVEPYAFRGLNYLRVLNVSGNQ 307
Query: 281 LAGQVPWEFSRVTTLKSLDLSDNRLS 306
L F V L++L L N L+
Sbjct: 308 LTTLEESVFHSVGNLETLILDSNPLA 333
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 1e-29
Identities = 86/511 (16%), Positives = 178/511 (34%), Gaps = 53/511 (10%)
Query: 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
+E + ++ S N P ++ L+IS+N S + I SL L +L N
Sbjct: 1 SEFL-VDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNR 56
Query: 161 FSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELG 218
+ + + L+ L+L+ + I +L+ L L+ N + I E G
Sbjct: 57 IQ-YLDISVFKFNQELEYLDLSHNKLVK-IS--CHPTVNLKHLDLSFNAFDALPICKEFG 112
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNL--TKLESLF 275
+ + + + + + + +++ + L + G E L + L +F
Sbjct: 113 NMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVF 172
Query: 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 335
+ + V L+ ++ + L L+ + N
Sbjct: 173 PTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSN-------- 224
Query: 336 SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGG-----V 390
L I WN++ L ++ + + +S G +
Sbjct: 225 ----LTLNNIETTWNSFIR---ILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKA 277
Query: 391 LFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFT 450
L + S+ F S S++ + L S++ ++D S N T
Sbjct: 278 LSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLT 337
Query: 451 GGIPTDINQASKLEYFNVSNN-----PKLGGMIPAQTWSLPSLQNFSASACNITGNLPP- 504
+ + ++LE + N K+ M T + SLQ S +++ +
Sbjct: 338 DTVFENCGHLTELETLILQMNQLKELSKIAEM----TTQMKSLQQLDISQNSVSYDEKKG 393
Query: 505 -FKSCKSISVIESHMNNLSGT-IPESVSNC--VELERIDLANNKLIGSIPEVLARLPVLG 560
KS+ + N+S + +++ C ++ +DL +NK+ SIP+ + +L L
Sbjct: 394 DCSWTKSLLSL-----NMSSNILTDTIFRCLPPRIKVLDLHSNKI-KSIPKQVVKLEALQ 447
Query: 561 VLDLSHNSLSGQIPAKFGSCSSLTVLNVSFN 591
L+++ N L F +SL + + N
Sbjct: 448 ELNVASNQLKSVPDGIFDRLTSLQKIWLHTN 478
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 6e-25
Identities = 70/393 (17%), Positives = 135/393 (34%), Gaps = 28/393 (7%)
Query: 103 LVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
L L+LS N+F + F N++ L L +S + I L VL ++
Sbjct: 92 LKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETY 151
Query: 162 SGSVPAE---ISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
E E L ++ F + + +LE ++ L +++ L
Sbjct: 152 GEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLS 211
Query: 219 MLKTVTHMEIGYNFY--QGNIPW-------QLGNMSEVQYLDIAGANLSGSIPKEL---- 265
+L + N W QL + V Y I+ L G +
Sbjct: 212 ILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYS 271
Query: 266 -SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSL 324
++L L + + + + + + + + + + + L
Sbjct: 272 GTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDF 331
Query: 325 MYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG---RNSKLRWVDVSTNNFNGSI 381
N ++ TV E+ L LE L + N L + + L+ +D+S N+ +
Sbjct: 332 SNNLLTDTVFENCGHLTELETLILQMNQLK-ELSKIAEMTTQMKSLQQLDISQNSVSYDE 390
Query: 382 PPDICSG-GVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDIN 440
CS L L + SN T ++ L + L L N IP + +L +
Sbjct: 391 KKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQ 447
Query: 441 YIDLSRNGFTGGIPTDI-NQASKLEYFNVSNNP 472
++++ N +P I ++ + L+ + NP
Sbjct: 448 ELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNP 479
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 5e-24
Identities = 69/377 (18%), Positives = 131/377 (34%), Gaps = 25/377 (6%)
Query: 245 SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304
+ L+I+ +S ++ +L+KL L + N++ F L+ LDLS N+
Sbjct: 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80
Query: 305 LSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV--QLPSLEILFIWNNYFSGSLPENLG 362
L S NL+ L L +N +P + L+ L + + S +
Sbjct: 81 LVKI---SCHPTVNLKHLDLSFNAFD-ALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIA 136
Query: 363 RNSKLRWVDVSTNNFNGSIPPD---ICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419
+ + + V + P+ + L + + F L S+ ++L
Sbjct: 137 HLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSN 196
Query: 420 LEDNSFSGEIPLKFSQLPDINY------IDLSRNGFTGGIPTDINQ---ASKLEYFNVSN 470
++ + S L + + L+ T I Q + + YF++SN
Sbjct: 197 IKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISN 256
Query: 471 NPKLG-GMIPAQTWSLPSLQNFSAS--ACNITGNLPP--FKSCKSISVIESHMNNLSGTI 525
G +S SL+ S ++ G ++ ++++ ++
Sbjct: 257 VKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVH 316
Query: 526 PESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLS--GQIPAKFGSCSSL 583
S +D +NN L ++ E L L L L N L +I SL
Sbjct: 317 MLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSL 376
Query: 584 TVLNVSFNDISGSIPSG 600
L++S N +S G
Sbjct: 377 QQLDISQNSVSYDEKKG 393
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 7e-04
Identities = 34/165 (20%), Positives = 55/165 (33%), Gaps = 13/165 (7%)
Query: 440 NYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNIT 499
+D S+NG +P D+ + K N+S N + + + SL L+ S I
Sbjct: 3 FLVDRSKNGLIH-VPKDL--SQKTTILNISQN-YISELWTSDILSLSKLRILIISHNRIQ 58
Query: 500 GNLPP--FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPE--VLAR 555
L FK + + ++ N L N L+ +DL+ N ++P
Sbjct: 59 -YLDISVFKFNQELEYLDLSHNKLVKISCHPTVN---LKHLDLSFNAF-DALPICKEFGN 113
Query: 556 LPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG 600
+ L L LS L + VL V
Sbjct: 114 MSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPE 158
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 5e-26
Identities = 57/279 (20%), Positives = 101/279 (36%), Gaps = 35/279 (12%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN--SFSG 163
+ + + P I +S L++ N G L L L SN SF G
Sbjct: 12 IRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
LK L+L+ + + S F + LE L + L Q+ E +
Sbjct: 69 CCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLK-QMS-EFSVFL-- 123
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLA 282
++ + YLDI+ + + L+ LE L + N
Sbjct: 124 -------------------SLRNLIYLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQ 163
Query: 283 GQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
+ F+ + L LDLS +L P +F L +L++L++ +N L
Sbjct: 164 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN 223
Query: 342 SLEILFIWNNYFSGSLPENL--GRNSKLRWVDVSTNNFN 378
SL++L N+ + + S L +++++ N+F
Sbjct: 224 SLQVLDYSLNHIM-TSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 55/236 (23%), Positives = 90/236 (38%), Gaps = 12/236 (5%)
Query: 245 SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQ--VPWEFSRVTTLKSLDLSD 302
S L++ L LT+L L L N L+ + T+LK LDLS
Sbjct: 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL-VQLPSLEILFIWNNYFSGSLPENL 361
N + + +F L+ L L ++ + S+ + L +L L I + + +
Sbjct: 88 NGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR-VAFNGI 145
Query: 362 GRN-SKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGSLSPSLSNC-SSLVRL 418
S L + ++ N+F + PDI + L L L LSP+ N SSL L
Sbjct: 146 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVL 204
Query: 419 RLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDI--NQASKLEYFNVSNNP 472
+ N+F + L + +D S N + S L + N++ N
Sbjct: 205 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM-TSKKQELQHFPSSLAFLNLTQND 259
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 6e-20
Identities = 52/255 (20%), Positives = 88/255 (34%), Gaps = 56/255 (21%)
Query: 103 LVDLNLSHN--SFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
L L+LS N SF G F TSL LD+S N L L LD +
Sbjct: 54 LTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHS- 111
Query: 161 FSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGML 220
L+ + S F S ++L +L ++ +
Sbjct: 112 ----------NLKQM------------SEFSVFLSLRNLIYLDISHTHTR-VAFNGI--- 145
Query: 221 KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRN 279
+S ++ L +AG + + + + L L L L +
Sbjct: 146 --------------------FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 185
Query: 280 QLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338
QL Q+ F+ +++L+ L++S N + L +L++L N + T + +
Sbjct: 186 QLE-QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM-TSKKQEL 243
Query: 339 Q--LPSLEILFIWNN 351
Q SL L + N
Sbjct: 244 QHFPSSLAFLNLTQN 258
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 8e-20
Identities = 57/266 (21%), Positives = 97/266 (36%), Gaps = 20/266 (7%)
Query: 370 VDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPS-LSNCSSLVRLRLEDN--SFS 426
+ ++ S+P I S +L L SN SL + L +L L N SF
Sbjct: 12 IRCNSKGLT-SVPTGIPSS--ATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFK 67
Query: 427 GEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQT-WSL 485
G + Y+DLS NG + ++ +LE+ + ++ L M SL
Sbjct: 68 GCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHS-NLKQMSEFSVFLSL 125
Query: 486 PSLQNFSASACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESV-SNCVELERIDLAN 542
+L S + F S+ V++ N+ + + L +DL+
Sbjct: 126 RNLIYLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 184
Query: 543 NKLIGSIPE-VLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGK 601
+ + + L L VL++SHN+ + +SL VL+ S N I + +
Sbjct: 185 CQ-LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM-TSKKQE 242
Query: 602 VLRLMGSSAY---AGNPKLCGAPLQP 624
+ S A+ N C Q
Sbjct: 243 LQHFPSSLAFLNLTQNDFACTCEHQS 268
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 1e-25
Identities = 53/288 (18%), Positives = 99/288 (34%), Gaps = 59/288 (20%)
Query: 715 GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCY-----NRHQAYLLYDYLP 769
V+VK + + I + I R+ + H N+ R + R + L+ +Y P
Sbjct: 36 ERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYP 95
Query: 770 NGNLSEKIRTKR-DWAAKYKIVLGVARGLCFLHHD------CYPAIPHGDLKASNIVFDE 822
NG+L + + DW + ++ V RGL +LH + PAI H DL + N++
Sbjct: 96 NGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN 155
Query: 823 NMEPHLAEFGF-------KYLTQLADGSFPAKIAWT----------ESGEFYNAMKEEMY 865
+ +++FG + + + + T + +
Sbjct: 156 DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQ 215
Query: 866 MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL-- 923
+D+Y G I EI R T+ +M + EVG+ + +D LV
Sbjct: 216 VDMYALGLIYWEIFM--RCTDLFPGESVPEY-----QMAFQTEVGNHPTFEDMQVLVSRE 268
Query: 924 ---------------------DVALLCTRSTPSDRPSMEEALKLLSGL 950
+ C R + + A + ++ L
Sbjct: 269 KQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 5e-25
Identities = 73/391 (18%), Positives = 136/391 (34%), Gaps = 37/391 (9%)
Query: 222 TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQ 280
V ++++ N + ++Q+L + I L+ L L L NQ
Sbjct: 31 HVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90
Query: 281 LAGQVPWEFSRVTTLKSLDLSDNRL-SGPIPE-SFADLKNLRLLSLMYNEMSGTVPESL- 337
F+ + L+ L L+ L + F L +L +L L N + P S
Sbjct: 91 FLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFF 150
Query: 338 VQLPSLEILFIWNNYFSGSLPENL---GRNSKLRWVDVSTNNFNGSIPPDICSG--GVLF 392
+ + +L + N S+ E + + +S+ + G F
Sbjct: 151 LNMRRFHVLDLTFNKVK-SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPF 209
Query: 393 KLI------LFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSR 446
K L N F S++ + + +++ S S S N+ D
Sbjct: 210 KNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNS---YNMGSSFGHTNFKDPDN 266
Query: 447 NGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWS-LPSLQNFSASACNITGNLPP- 504
F G +AS ++ ++S + K+ + +S L+ + + I +
Sbjct: 267 FTFKG------LEASGVKTCDLSKS-KIF-ALLKSVFSHFTDLEQLTLAQNEIN-KIDDN 317
Query: 505 -FKSCKSISVIESHMNNLSGTIPESV-SNCVELERIDLANNKLIGSIPE-VLARLPVLGV 561
F + + N L +I + N +LE +DL+ N I ++ + LP L
Sbjct: 318 AFWGLTHLLKLNLSQNFLG-SIDSRMFENLDKLEVLDLSYNH-IRALGDQSFLGLPNLKE 375
Query: 562 LDLSHNSLSGQIPAK-FGSCSSLTVLNVSFN 591
L L N L +P F +SL + + N
Sbjct: 376 LALDTNQLKS-VPDGIFDRLTSLQKIWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 6e-23
Identities = 61/343 (17%), Positives = 123/343 (35%), Gaps = 42/343 (12%)
Query: 293 TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE-SLVQLPSLEILFIWNN 351
+ +DLS N ++ SF+ L++L+ L + + + L SL IL + N
Sbjct: 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89
Query: 352 YFSGSLPEN-LGRNSKLRWVDVSTNNFNGS-IPPDICSGGV-LFKLILFSNNFTGSLSPS 408
F L + L + ++ N +G+ + + L L+L NN + P+
Sbjct: 90 QFL-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIK-KIQPA 147
Query: 409 --LSNCSSLVRLRLEDNSFS----------GEIPLKFSQLPDINYIDLSRNGFTGGIPTD 456
N L L N +L I D++ +
Sbjct: 148 SFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGN 207
Query: 457 INQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIES 516
+ + + ++S N + + + + + + + N+ + ++
Sbjct: 208 PFKNTSITTLDLSGN-GFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDN 266
Query: 517 ----------------HMNNLSGTIPESV-SNCVELERIDLANNKLIGSIPE-VLARLPV 558
+ + + +SV S+ +LE++ LA N+ I I + L
Sbjct: 267 FTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNE-INKIDDNAFWGLTH 324
Query: 559 LGVLDLSHNSLSGQIPAK-FGSCSSLTVLNVSFNDISGSIPSG 600
L L+LS N L I ++ F + L VL++S+N I ++
Sbjct: 325 LLKLNLSQNFLGS-IDSRMFENLDKLEVLDLSYNHIR-ALGDQ 365
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 98.3 bits (245), Expect = 1e-21
Identities = 76/357 (21%), Positives = 131/357 (36%), Gaps = 37/357 (10%)
Query: 102 ELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
+L L + + F L+SLI L + N F G L NL VL +
Sbjct: 55 DLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCN 114
Query: 161 F-SGSVPAEI-SQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLNDQIPAEL 217
+ L L++L L + P S F + + L L N + I E
Sbjct: 115 LDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKV-KSICEED 173
Query: 218 ---GMLKTVTHMEIGYNFYQGNIPWQLG--------NMSEVQYLDIAGANLSGSIPKELS 266
K T + + Q + LG + + LD++G S+ K
Sbjct: 174 LLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFF 233
Query: 267 NL---TKLESLFLFRNQLAGQ----------VPWEFSR--VTTLKSLDLSDNRLSGPIPE 311
+ TK++SL L + G + F + +K+ DLS +++ +
Sbjct: 234 DAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKS 293
Query: 312 SFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWV 370
F+ +L L+L NE++ + L L L + N+ S+ + N KL +
Sbjct: 294 VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLG-SIDSRMFENLDKLEVL 352
Query: 371 DVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGSLSPS-LSNCSSLVRLRLEDNSF 425
D+S N+ ++ G L +L L +N S+ +SL ++ L N +
Sbjct: 353 DLSYNHI-RALGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPW 407
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 6e-05
Identities = 41/227 (18%), Positives = 77/227 (33%), Gaps = 33/227 (14%)
Query: 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISL---------- 130
+++ L G P + + L+LS N F F+ + +
Sbjct: 194 DMNEYWLGWEKCGNPFK--NTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYN 251
Query: 131 ---DISRNNFSGHFPGGIQSLR--NLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSY 184
NF + L + D + ++ + S L+ L LA +
Sbjct: 252 MGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNE 310
Query: 185 FSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAEL-GMLKTVTHMEIGYNFYQGNIPWQL- 241
+ I F L L+L+ N L I + + L + +++ YN + + Q
Sbjct: 311 IN-KIDDNAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIR-ALGDQSF 367
Query: 242 GNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLAGQVPW 287
+ ++ L + L S+P LT L+ ++L N PW
Sbjct: 368 LGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTN------PW 407
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 2e-24
Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 36/283 (12%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
N+ + + S + P I ++ L++ NN + L +L VL N
Sbjct: 53 SNQFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRN 109
Query: 160 SFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAEL 217
S + + L L L L ++ + IPS F L L L N + IP+
Sbjct: 110 SIR-QIEVGAFNGLASLNTLELFDNWLTV-IPSGAFEYLSKLRELWLRNNPIE-SIPSYA 166
Query: 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFL 276
+ + LD+ I + L L+ L L
Sbjct: 167 -----------------------FNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNL 203
Query: 277 FRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336
+ +P + + L+ L++S N P SF L +L+ L +M +++S +
Sbjct: 204 GMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNA 261
Query: 337 LVQLPSLEILFIWNNYFSGSLPEN-LGRNSKLRWVDVSTNNFN 378
L SL L + +N S SLP + L + + N +N
Sbjct: 262 FDGLASLVELNLAHNNLS-SLPHDLFTPLRYLVELHLHHNPWN 303
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 3e-21
Identities = 48/251 (19%), Positives = 85/251 (33%), Gaps = 11/251 (4%)
Query: 245 SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304
++ + LS +P+ + + L L N + F + L+ L L N
Sbjct: 54 NQFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNS 110
Query: 305 LSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN 364
+ +F L +L L L N ++ + L L L++ NN S+P
Sbjct: 111 IRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNR 169
Query: 365 -SKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLED 422
L +D+ I G L L L N + P+L+ L L +
Sbjct: 170 VPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DM-PNLTPLVGLEELEMSG 227
Query: 423 NSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQT 482
N F P F L + + + + + + + L N+++N L +P
Sbjct: 228 NHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHN-NL-SSLPHDL 285
Query: 483 W-SLPSLQNFS 492
+ L L
Sbjct: 286 FTPLRYLVELH 296
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 1e-15
Identities = 60/276 (21%), Positives = 108/276 (39%), Gaps = 33/276 (11%)
Query: 364 NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDN 423
+++ V + + +P I S L L NN + + + L L+L N
Sbjct: 53 SNQFSKVVCTRRGLS-EVPQGIPSN--TRYLNLMENNIQMIQADTFRHLHHLEVLQLGRN 109
Query: 424 SFSGEIPLK-FSQLPDINYIDLSRNGFTGGIPTDI-NQASKLEYFNVSNNPKLGGMIPAQ 481
S +I + F+ L +N ++L N T IP+ SKL + NN + IP+
Sbjct: 110 SIR-QIEVGAFNGLASLNTLELFDNWLTV-IPSGAFEYLSKLRELWLRNN-PIE-SIPSY 165
Query: 482 TWS-LPSLQNFSASACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESVSNCVELERI 538
++ +PSL + F+ ++ + M N+ +P +++ V LE +
Sbjct: 166 AFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEEL 223
Query: 539 DLANNKLIGSIPE-VLARLPVLGVLDLSHNSLSGQIPAK-FGSCSSLTVLNVSFNDISGS 596
+++ N I L L L + ++ +S I F +SL LN++ N++S S
Sbjct: 224 EMSGNH-FPEIRPGSFHGLSSLKKLWVMNSQVS-LIERNAFDGLASLVELNLAHNNLS-S 280
Query: 597 IPSG--------KVLRLMGSSAYAGNPKLCGAPLQP 624
+P L L NP C +
Sbjct: 281 LPHDLFTPLRYLVELHL------HHNPWNCDCDILW 310
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 3e-24
Identities = 60/346 (17%), Positives = 110/346 (31%), Gaps = 64/346 (18%)
Query: 101 NELVDL--NLSHNSFSGQFPVEIF----NLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154
N L N +N+ SG + F +RN + + L
Sbjct: 8 NNNFSLSQNSFYNTISGT-YADYFSAWDKWEKQALPGENRNEAVSLLKECL--INQFSEL 64
Query: 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214
+ S S+P + + VL + + +P SLE+L N L+ +P
Sbjct: 65 QLNRLNLS-SLPDNLPP--QITVLEITQNALI-SLPELPA---SLEYLDACDNRLS-TLP 116
Query: 215 AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESL 274
L ++LD+ L+ +P+ + L +
Sbjct: 117 ELPASL---------------------------KHLDVDNNQLT-MLPELPALLEYIN-- 146
Query: 275 FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP 334
NQL +P T+L+ L + +N+L+ +PE ++L L + N + ++P
Sbjct: 147 -ADNNQL-TMLP---ELPTSLEVLSVRNNQLTF-LPEL---PESLEALDVSTNLLE-SLP 196
Query: 335 ESLVQLPSLEILFIW----NNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV 390
V+ E I+ N + +PEN+ + + N + S + S
Sbjct: 197 AVPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLS-SRIRESLSQQT 254
Query: 391 LFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQL 436
+ S+S N F SQ+
Sbjct: 255 AQPDYHGPRIYF-SMSDGQQNTLHRPLADAVTAWFPENKQSDVSQI 299
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-22
Identities = 56/299 (18%), Positives = 100/299 (33%), Gaps = 55/299 (18%)
Query: 91 LPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRN 150
N+ +L L+ + S P + + L+I++N P + +
Sbjct: 49 AVSLLKECLINQFSELQLNRLNLS-SLPDNLP--PQITVLEITQNALI-SLP---ELPAS 101
Query: 151 LLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN 210
L LDA N S ++P + L+H L++ + + +P LE+++ N L
Sbjct: 102 LEYLDACDNRLS-TLPELPASLKH---LDVDNNQLTM-LPELPA---LLEYINADNNQLT 153
Query: 211 DQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTK 270
+P L + L + L+ +P+ +L
Sbjct: 154 -MLPELPTSL---------------------------EVLSVRNNQLT-FLPELPESLEA 184
Query: 271 LESLFLFRNQLAGQVPWEFSRVTTLKS----LDLSDNRLSGPIPESFADLKNLRLLSLMY 326
L + N L +P R + +NR++ IPE+ L + L
Sbjct: 185 ---LDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILED 239
Query: 327 NEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDI 385
N +S + ESL Q + YFS S + D T F + D+
Sbjct: 240 NPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQ--NTLHRPLADAVTAWFPENKQSDV 296
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 95.0 bits (236), Expect = 2e-20
Identities = 63/325 (19%), Positives = 106/325 (32%), Gaps = 83/325 (25%)
Query: 297 SLDLSDNRLSGPIPESFA---DLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
S + N +SG + F+ + L NE + E L + L +
Sbjct: 14 SQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECL--INQFSELQLNRLNL 71
Query: 354 SGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCS 413
S SLP+NL + ++++ N S+P S L L N + +L ++
Sbjct: 72 S-SLPDNLPPQ--ITVLEITQNAL-ISLPELPAS---LEYLDACDNRLS-TLPELPAS-- 121
Query: 414 SLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPK 473
L L +++N + + LP+ + LEY N NN +
Sbjct: 122 -LKHLDVDNN--------QLTMLPE--------------------LPALLEYINADNN-Q 151
Query: 474 LGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCV 533
L M+P SL+ S +T +PE +
Sbjct: 152 LT-MLPE---LPTSLEVLSVRNNQLT------------------------FLPELPES-- 181
Query: 534 ELERIDLANNKLIGSIPEVLARLP----VLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVS 589
LE +D++ N L S+P V R N ++ IP S + +
Sbjct: 182 -LEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILE 238
Query: 590 FNDISGSIPSGKVLRLMGSSAYAGN 614
N +S S + + Y G
Sbjct: 239 DNPLS-SRIRESLSQQTAQPDYHGP 262
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 83.9 bits (207), Expect = 7e-17
Identities = 55/373 (14%), Positives = 123/373 (32%), Gaps = 60/373 (16%)
Query: 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140
L+ LS +LP ++ L ++ N+ P +L L D N S
Sbjct: 65 QLNRLNLS-SLP----DNLPPQITVLEITQNALI-SLPELPASLEYL---DACDNRLS-T 114
Query: 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLE 200
P SL++L D +N + +P + LE++ N + + +P S LE
Sbjct: 115 LPELPASLKHL---DVDNNQLT-MLPELPALLEYI---NADNNQLTM-LPELPTS---LE 163
Query: 201 FLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG--NIPWQLGNMSEVQ-YLDIAGANL 257
L + N L +P L +++ N + +P + + E + + +
Sbjct: 164 VLSVRNNQLT-FLPELPESL---EALDVSTNLLESLPAVPVRNHHSEETEIFFRCRENRI 219
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317
+ IP+ + +L ++ L N L+ ++ S+ T S +
Sbjct: 220 T-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQ------ 272
Query: 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNF 377
+ ++ ++ V + ++ IW+ N+ ++D ++
Sbjct: 273 ----QNTLHRPLADAVTAWFPENKQSDVSQIWHA-----FEHEEHANTFSAFLDRLSDTV 323
Query: 378 NGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLP 437
+ F ++ L S+ LR + + + +
Sbjct: 324 SARNTSG----------------FREQVAAWLEKLSASAELRQQSFAVAADATESCEDRV 367
Query: 438 DINYIDLSRNGFT 450
+ + +L +
Sbjct: 368 ALTWNNLRKTLLV 380
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 5e-24
Identities = 56/283 (19%), Positives = 102/283 (36%), Gaps = 36/283 (12%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
N+ + + + P I T+ L++ N + LR+L +L N
Sbjct: 42 SNQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRN 98
Query: 160 SFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAEL 217
++ + L +L L L + + IP+ F L+ L L N + IP+
Sbjct: 99 HIR-TIEIGAFNGLANLNTLELFDNRLTT-IPNGAFVYLSKLKELWLRNNPIE-SIPSYA 155
Query: 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFL 276
+ ++ LD+ I + L+ L L L
Sbjct: 156 -----------------------FNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 192
Query: 277 FRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336
L ++P + + L LDLS N LS P SF L +L+ L ++ +++ +
Sbjct: 193 AMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNA 250
Query: 337 LVQLPSLEILFIWNNYFSGSLPEN-LGRNSKLRWVDVSTNNFN 378
L SL + + +N + LP + L + + N +N
Sbjct: 251 FDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHNPWN 292
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 3e-21
Identities = 67/328 (20%), Positives = 103/328 (31%), Gaps = 82/328 (25%)
Query: 245 SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304
++ + NL +P +S T L L NQ+ F + L+ L LS N
Sbjct: 43 NQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNH 99
Query: 305 LSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN 364
+ +F L NL L L N ++ + V L L+ L++ NN S+P
Sbjct: 100 IRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNR 158
Query: 365 -SKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDN 423
LR +D+ I + S+L L L
Sbjct: 159 IPSLRRLDLGELKRLSYISEG-----------------------AFEGLSNLRYLNLAMC 195
Query: 424 SFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQT- 482
+ EIP + L ++ +DLS N + I +
Sbjct: 196 NLR-EIP-NLTPLIKLDELDLSGNHLS--------------------------AIRPGSF 227
Query: 483 WSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLAN 542
L LQ + + I VIE + N L I+LA+
Sbjct: 228 QGLMHLQKLW-----MIQS--------QIQVIE----------RNAFDNLQSLVEINLAH 264
Query: 543 NKLIGSIPE-VLARLPVLGVLDLSHNSL 569
N L +P + L L + L HN
Sbjct: 265 NNLT-LLPHDLFTPLHHLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 82.5 bits (204), Expect = 1e-16
Identities = 60/343 (17%), Positives = 118/343 (34%), Gaps = 82/343 (23%)
Query: 252 IAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPE 311
+A + + P S + + R L +VP S T + L+L +N++
Sbjct: 26 VAETGSAQTCPSVCSCSNQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVN 82
Query: 312 SFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWV 370
SF L++L +L L N + + L +L L +++N + ++P SKL+ +
Sbjct: 83 SFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT-TIPNGAFVYLSKLKEL 141
Query: 371 DVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIP 430
+ N SIP + + SL RL L +
Sbjct: 142 WLRNNPIE-SIPSY-----------------------AFNRIPSLRRLDLGEL------- 170
Query: 431 LKFSQLPDINYID-LSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQ 489
+ +S F G L +L+
Sbjct: 171 ---------KRLSYISEGAFEG---------------------------------LSNLR 188
Query: 490 NFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSI 549
+ + CN+ +P + ++ N+LS P S + L+++ + +++
Sbjct: 189 YLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIE 247
Query: 550 PEVLARLPVLGVLDLSHNSLSGQIPAK-FGSCSSLTVLNVSFN 591
L L ++L+HN+L+ +P F L +++ N
Sbjct: 248 RNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 74.0 bits (182), Expect = 8e-14
Identities = 48/194 (24%), Positives = 68/194 (35%), Gaps = 14/194 (7%)
Query: 413 SSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDI-NQASKLEYFNVSNN 471
++ L L +N F L + + LSRN I N + L + +N
Sbjct: 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT-IEIGAFNGLANLNTLELFDN 122
Query: 472 PKLGGMIPAQT-WSLPSLQNFSASACNITGNLPP--FKSCKSISVIE-SHMNNLSGTIPE 527
+L IP L L+ I ++P F S+ ++ + LS I E
Sbjct: 123 -RLT-TIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLS-YISE 178
Query: 528 SV-SNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVL 586
L ++LA L IP L L L LDLS N LS P F L L
Sbjct: 179 GAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 236
Query: 587 NVSFNDISGSIPSG 600
+ + I I
Sbjct: 237 WMIQSQIQ-VIERN 249
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 3e-23
Identities = 62/316 (19%), Positives = 106/316 (33%), Gaps = 44/316 (13%)
Query: 95 PLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154
P I + L+L +N S + L L +L + N S LR L L
Sbjct: 49 PKEISPD-TTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKL 107
Query: 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214
N +P + L L + + F +++ + + GN L
Sbjct: 108 YISKNHLV-EIPPNL--PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPL----- 159
Query: 215 AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESL 274
+ + G ++ YL I+ A L+ IPK+L L L
Sbjct: 160 ---------ENSGFEPGAFDG---------LKLNYLRISEAKLT-GIPKDL--PETLNEL 198
Query: 275 FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP 334
L N++ + R + L L L N++ S + L LR L L N++S VP
Sbjct: 199 HLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVP 257
Query: 335 ESLVQLPSLEILFIWNNYFSGSLPEN-------LGRNSKLRWVDVSTNNF-NGSIPPDIC 386
L L L+++++ N + + N + + + + N + P
Sbjct: 258 AGLPDLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATF 316
Query: 387 SGGVLFKL--ILFSNN 400
+ I F N
Sbjct: 317 RC--VTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 97.8 bits (244), Expect = 3e-22
Identities = 55/305 (18%), Positives = 99/305 (32%), Gaps = 32/305 (10%)
Query: 245 SEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDN 303
+ LD+ ++S + K+ L L +L L N+++ FS + L+ L +S N
Sbjct: 54 PDTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112
Query: 304 RLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFI-WNNYFSGSLPENLG 362
L IP + +L L + N + L ++ + + N +
Sbjct: 113 HLVE-IPPNL--PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAF 169
Query: 363 RNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSP-SLSNCSSLVRLRLE 421
KL ++ +S IP D+ L +L L N ++ L S L RL L
Sbjct: 170 DGLKLNYLRISEAKLT-GIPKDLPET--LNELHLDHNKIQ-AIELEDLLRYSKLYRLGLG 225
Query: 422 DNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQ 481
N S LP + + L N + +P + L+ + N
Sbjct: 226 HNQIRMIENGSLSFLPTLRELHLDNNKLSR-VPAGLPDLKLLQVVYLHTNN--------- 275
Query: 482 TWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLS-GTIPESVSNCV-ELERID 539
+ + + + I N + + + CV + I
Sbjct: 276 ------ITKVGVNDFC---PVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQ 326
Query: 540 LANNK 544
N K
Sbjct: 327 FGNYK 331
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 1e-19
Identities = 71/342 (20%), Positives = 111/342 (32%), Gaps = 74/342 (21%)
Query: 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330
L + L VP E S TT LDL +N +S + F L++L L L+ N++S
Sbjct: 35 LRVVQCSDLGLK-AVPKEISPDTT--LLDLQNNDISELRKDDFKGLQHLYALVLVNNKIS 91
Query: 331 GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV 390
++ L L+ L+I N L IPP+
Sbjct: 92 KIHEKAFSPLRKLQKLYISKN--------------HLV-----------EIPPN------ 120
Query: 391 LFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFT 450
L SLV LR+ DN FS L ++N I++ N
Sbjct: 121 LPS--------------------SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLE 160
Query: 451 -GGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPP--FKS 507
G KL Y +S KL IP +L I +
Sbjct: 161 NSGFEPGAFDGLKLNYLRISEA-KL-TGIPKDL--PETLNELHLDHNKIQ-AIELEDLLR 215
Query: 508 CKSISVIESHMNNLSGTIPESV-SNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSH 566
+ + N + I S L + L NNKL +P L L +L V+ L
Sbjct: 216 YSKLYRLGLGHNQIR-MIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHT 273
Query: 567 NSLSGQIPAK-------FGSCSSLTVLNVSFNDIS-GSIPSG 600
N+++ ++ + +++ N + +
Sbjct: 274 NNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPA 314
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 1e-19
Identities = 55/303 (18%), Positives = 107/303 (35%), Gaps = 24/303 (7%)
Query: 198 SLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257
L + + L +P E+ T +++ N + + L + +
Sbjct: 34 HLRVVQCSDLGL-KAVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKI 90
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317
S K S L KL+ L++ +N L ++P +L L + DNR+ F+ L+
Sbjct: 91 SKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLPS--SLVELRIHDNRIRKVPKGVFSGLR 147
Query: 318 NLRLLSLMYNE-MSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376
N+ + + N + L L I + +P++L L + + N
Sbjct: 148 NMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT-GIPKDLPET--LNELHLDHNK 204
Query: 377 FNGSIPPDICSG-GVLFKLILFSNNFTGSLSP-SLSNCSSLVRLRLEDNSFSGEIPLKFS 434
+I + L++L L N + SLS +L L L++N S +P
Sbjct: 205 IQ-AIELEDLLRYSKLYRLGLGHNQIR-MIENGSLSFLPTLRELHLDNNKLS-RVPAGLP 261
Query: 435 QLPDINYIDLSRNGFTGGIPTDI-------NQASKLEYFNVSNNPKLGGMIPAQTWS-LP 486
L + + L N T + + + + ++ NNP + T+ +
Sbjct: 262 DLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVT 320
Query: 487 SLQ 489
Sbjct: 321 DRL 323
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 8e-11
Identities = 38/218 (17%), Positives = 76/218 (34%), Gaps = 21/218 (9%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNF-SGHFPGGIQSLRNLLVLDAF 157
+ LV+L + N + P +F L ++ +++ N + F G L L
Sbjct: 122 PSSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRIS 180
Query: 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAE 216
+ +P ++ E L L+L + I + + L L L N + I
Sbjct: 181 EAKLT-GIPKDL--PETLNELHLDHNKIQA-IELEDLLRYSKLYRLGLGHNQIRM-IENG 235
Query: 217 -LGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-------LSNL 268
L L T+ + + N +P L ++ +Q + + N++ +
Sbjct: 236 SLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKR 293
Query: 269 TKLESLFLFRNQLAGQV--PWEFSRVTTLKSLDLSDNR 304
+ LF N + P F VT ++ + +
Sbjct: 294 AYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 4e-23
Identities = 50/261 (19%), Positives = 98/261 (37%), Gaps = 48/261 (18%)
Query: 715 GITVSVKKIEWGATRIKIVSEF---ITRIGTVRHKNLIRLLGFCYNRHQAYL--LYDYLP 769
G + VK ++ + +F R+ H N++ +LG C + + + ++P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 770 NGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
G+L + D + K L +ARG+ FLH P IP L + +++ DE+M
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMT 151
Query: 826 PHLAEFGFKYLTQLADGSFPAKIAWT--E--SGEFYNAMKEEMYMDVYGFGEIIL-EILT 880
++ K+ Q + AW E + + + D++ F ++L E++T
Sbjct: 152 ARISMADVKFSFQSPGRMYA--PAWVAPEALQKKPEDTNRRS--ADMWSFA-VLLWELVT 206
Query: 881 NGRLTNAGSSLQNKPIDGL-----LGEMYNENE-----VGSSSSLQDEIKLVLDVALLCT 930
P L ++ E G S + +K +C
Sbjct: 207 R-----------EVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMK-------ICM 248
Query: 931 RSTPSDRPSMEEALKLLSGLK 951
P+ RP + + +L ++
Sbjct: 249 NEDPAKRPKFDMIVPILEKMQ 269
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 4e-23
Identities = 63/331 (19%), Positives = 112/331 (33%), Gaps = 42/331 (12%)
Query: 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185
L + S P + + +LD +N + + L++L L L +
Sbjct: 32 HLRVVQCSDLGLE-KVPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKI 88
Query: 186 SGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI----PWQL 241
S P F LE L+L+ N L ++P M KT+ + + N I
Sbjct: 89 SKISPGAFAPLVKLERLYLSKNQL-KELPE--KMPKTLQELRVHEN----EITKVRKSVF 141
Query: 242 GNMSEVQYLDIAGANL-SGSIPKE-LSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSL 298
++++ +++ L S I + KL + + + +P +L L
Sbjct: 142 NGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPP---SLTEL 197
Query: 299 DLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLP 358
L N+++ S L NL L L +N +S SL P L L + NN +P
Sbjct: 198 HLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVP 256
Query: 359 ENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRL 418
L + ++ V + NN + +I + + +S +
Sbjct: 257 GGLADHKYIQVVYLHNNNIS-AIGSNDFCPPGYN-----------------TKKASYSGV 298
Query: 419 RLEDNSFS-GEIPLK-FSQLPDINYIDLSRN 447
L N EI F + + L
Sbjct: 299 SLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 2e-22
Identities = 55/286 (19%), Positives = 96/286 (33%), Gaps = 47/286 (16%)
Query: 103 LVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
L L L +N S + F L L L +S+N P + + L L N
Sbjct: 78 LHTLILINNKIS-KISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRVHENEI 133
Query: 162 SGSVPAEI-SQLEHLKVLNLAG-SYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAELG 218
+ V + + L + V+ L S I + F K L ++ +A + IP L
Sbjct: 134 T-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL- 190
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLF 277
P L L + G ++ + L L L L L
Sbjct: 191 -------------------PPSL------TELHLDGNKIT-KVDAASLKGLNNLAKLGLS 224
Query: 278 RNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG------ 331
N ++ + L+ L L++N+L +P AD K ++++ L N +S
Sbjct: 225 FNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNISAIGSNDF 283
Query: 332 TVPESLVQLPSLEILFIWNNYFS-GSLPENLGRN-SKLRWVDVSTN 375
P + S + +++N + + R V +
Sbjct: 284 CPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 6e-22
Identities = 66/309 (21%), Positives = 115/309 (37%), Gaps = 24/309 (7%)
Query: 248 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307
+ + + L +PK+L T L L N++ +F + L +L L +N++S
Sbjct: 34 RVVQCSDLGLE-KVPKDLPPDTA--LLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK 90
Query: 308 PIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKL 367
P +FA L L L L N++ +PE + +L+ L + N + +++
Sbjct: 91 ISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQM 147
Query: 368 RWVDVSTNNF-NGSIPPDICSG-GVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSF 425
V++ TN + I G L + + N T ++ L SL L L+ N
Sbjct: 148 IVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKI 204
Query: 426 SGEIPLK-FSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWS 484
+ ++ L ++ + LS N + + L +++NN KL +P
Sbjct: 205 T-KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNN-KLV-KVPGGLAD 261
Query: 485 LPSLQ-------NFSASACNITGNLPPFKSCKSISVIESHMNNLSGT-IPESVSNCVE-L 535
+Q N SA N S S + N + I S CV
Sbjct: 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVR 321
Query: 536 ERIDLANNK 544
+ L N K
Sbjct: 322 AAVQLGNYK 330
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 7e-22
Identities = 65/339 (19%), Positives = 122/339 (35%), Gaps = 67/339 (19%)
Query: 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330
L + L +VP + T LDL +N+++ F +LKNL L L+ N++S
Sbjct: 33 LRVVQCSDLGLE-KVPKDLPPDTA--LLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS 89
Query: 331 GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV 390
P + L LE L++ N LPE + + L+ + V N +
Sbjct: 90 KISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKT--LQELRVHENEIT-KVRKS------ 139
Query: 391 LFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSF-SGEIPLK-FSQLPDINYIDLSRNG 448
+ + ++ + L N S I F + ++YI ++
Sbjct: 140 -----------------VFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN 182
Query: 449 FTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSC 508
T IP + L ++ N + A++ K
Sbjct: 183 IT-TIPQGL--PPSLTELHLDGN---------------KITKVDAAS---------LKGL 215
Query: 509 KSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNS 568
+++ + N++S S++N L + L NNKL+ +P LA + V+ L +N+
Sbjct: 216 NNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNN 274
Query: 569 LSG------QIPAKFGSCSSLTVLNVSFNDIS-GSIPSG 600
+S P +S + +++ N + I
Sbjct: 275 ISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPS 313
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 4e-21
Identities = 50/261 (19%), Positives = 101/261 (38%), Gaps = 20/261 (7%)
Query: 240 QLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299
N+ + L + +S P + L KLE L+L +NQL ++P + + TL+ L
Sbjct: 71 DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPK--TLQELR 127
Query: 300 LSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV--PESLVQLPSLEILFIWNNYFSGSL 357
+ +N ++ F L + ++ L N + + + + L + I + + ++
Sbjct: 128 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TI 186
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGSLSP-SLSNCSSL 415
P+ L + L + + N + G L KL L N+ + ++ SL+N L
Sbjct: 187 PQGLPPS--LTELHLDGNKIT-KVDAASLKGLNNLAKLGLSFNSIS-AVDNGSLANTPHL 242
Query: 416 VRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTG------GIPTDINQASKLEYFNVS 469
L L +N ++P + I + L N + P + + ++
Sbjct: 243 RELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLF 301
Query: 470 NNPKLGGMIPAQTWS-LPSLQ 489
+NP I T+ +
Sbjct: 302 SNPVQYWEIQPSTFRCVYVRA 322
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 4e-17
Identities = 45/262 (17%), Positives = 90/262 (34%), Gaps = 62/262 (23%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
L +L + N + + +F L +I +++ N GI++ AF
Sbjct: 120 PKTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLK---SSGIEN-------GAFQ 168
Query: 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
++ L + +A + + IP G SL LHL GN + ++ A
Sbjct: 169 G------------MKKLSYIRIADTNITT-IPQ--GLPPSLTELHLDGNKIT-KVDAAS- 211
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLF 277
L ++ + L ++ ++S ++ L+N L L L
Sbjct: 212 ----------------------LKGLNNLAKLGLSFNSIS-AVDNGSLANTPHLRELHLN 248
Query: 278 RNQLAGQVPWEFSRVTTLKSLDLSDNRLSG------PIPESFADLKNLRLLSLMYNEMSG 331
N+L +VP + ++ + L +N +S P + +SL N +
Sbjct: 249 NNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307
Query: 332 TV--PESLVQLPSLEILFIWNN 351
P + + + + N
Sbjct: 308 WEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 4e-12
Identities = 39/207 (18%), Positives = 69/207 (33%), Gaps = 28/207 (13%)
Query: 103 LVDLNLSHNSF-SGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
++ + L N S F + L + I+ N + P G+ +L L N
Sbjct: 147 MIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNK 203
Query: 161 FSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ V A L +L L L+ + S + L LHL N L ++P L
Sbjct: 204 IT-KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL-VKVPGGLAD 261
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
K + + + N N+S + D P + + LF N
Sbjct: 262 HKYIQVVYLHNN-----------NISAIGSNDFCP-------PGYNTKKASYSGVSLFSN 303
Query: 280 QL-AGQVPWE-FSRVTTLKSLDLSDNR 304
+ ++ F V ++ L + +
Sbjct: 304 PVQYWEIQPSTFRCVYVRAAVQLGNYK 330
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 98.8 bits (246), Expect = 2e-21
Identities = 89/503 (17%), Positives = 162/503 (32%), Gaps = 69/503 (13%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGI-QSLRNLLVLDAFSNSFSGS 164
L+LS NS S +I L+ L L +S N + ++L LD N +
Sbjct: 57 LSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSHNRLQ-N 114
Query: 165 VPAEISQLEHLKVLNLAG-SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
+ + L+ L+L+ + P+ +FG+ L FL L+ + L
Sbjct: 115 ISC--CPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLS 172
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG 283
LD+ ++ G + L L L + +
Sbjct: 173 CI-----------------------LLDLVSYHIKGGETESLQIP-NTTVLHLVFHPNSL 208
Query: 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADL-----KNLRLLSLMYNEMSGTVPE--- 335
V L L LS+ +L+ + + LL++ + T
Sbjct: 209 FSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVK 268
Query: 336 --SLVQLPSLEILFIWNNYFSGSLPENLGRNSK-----LRWVDVSTNNFNGSIPPDICSG 388
+E L I+N + + S+ L V F S
Sbjct: 269 LFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVF 328
Query: 389 GVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNG 448
+ +L ++ + SS L N F+ + S L + + L RNG
Sbjct: 329 AEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNG 388
Query: 449 FTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSC 508
+ + SL + ++ A + T
Sbjct: 389 LKN-FFKVALMTKNMSSLETLDV---------------SLNSLNSHAYDRTCAWA----- 427
Query: 509 KSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNS 568
+SI V+ N L+G++ + +++ +DL NN++ SIP+ + L L L+++ N
Sbjct: 428 ESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQ 484
Query: 569 LSGQIPAKFGSCSSLTVLNVSFN 591
L F +SL + + N
Sbjct: 485 LKSVPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 96.1 bits (239), Expect = 1e-20
Identities = 77/391 (19%), Positives = 133/391 (34%), Gaps = 26/391 (6%)
Query: 103 LVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
L L+LS N F + F NLT L L +S F + L +L +
Sbjct: 123 LRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYH 182
Query: 162 SGSVPAEISQLEHLKVLNLAGSY---FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
E Q+ + VL+L FS + + L+ ++ N N Q
Sbjct: 183 IKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFL 242
Query: 219 MLKTVTHMEIGYNFYQGNIPW-------QLGNMSEVQYLDIAGANLSGSIPKELSNLTKL 271
T + W Q V+YL+I ++ I +E ++
Sbjct: 243 SELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSET 302
Query: 272 ESLFLFRNQLAGQV-----PWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMY 326
L + QV +S + LS + + L+
Sbjct: 303 ALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQ 362
Query: 327 NEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE---NLGRNSKLRWVDVSTNNFNGSIPP 383
N + +V + L L+ L + N + + S L +DVS N+ N
Sbjct: 363 NVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETLDVSLNSLNSHAYD 421
Query: 384 DICSG-GVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYI 442
C+ + L L SN TGS+ L + L L +N IP + L + +
Sbjct: 422 RTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQEL 478
Query: 443 DLSRNGFTGGIPTDI-NQASKLEYFNVSNNP 472
+++ N +P + ++ + L+Y + +NP
Sbjct: 479 NVASNQLK-SVPDGVFDRLTSLQYIWLHDNP 508
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 86.5 bits (214), Expect = 1e-17
Identities = 58/352 (16%), Positives = 121/352 (34%), Gaps = 45/352 (12%)
Query: 80 INLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139
L + +L + + N L L LS+ + + + S ++ + N +
Sbjct: 197 TVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVT- 255
Query: 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN--LAGSYFSGPIPSQFGSFK 197
L+++ S +E+L + N + + K
Sbjct: 256 --------LQHIETTWKCSVKLFQFF--WPRPVEYLNIYNLTITERIDREEFTYSETALK 305
Query: 198 SLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257
SL H+ + A + + + + + S +L+
Sbjct: 306 SLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVF 365
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL----SGPIPESF 313
+ S+ + S L +L++L L RN L + SL+ D L S +
Sbjct: 366 TDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTC 424
Query: 314 ADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVS 373
A +++ +L+L N ++G+V L P +++L + NN S+P+++ L+ ++V+
Sbjct: 425 AWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVA 481
Query: 374 TNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSF 425
+N S+P +SL + L DN +
Sbjct: 482 SNQLK-SVPDG-----------------------VFDRLTSLQYIWLHDNPW 509
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 3e-17
Identities = 64/370 (17%), Positives = 128/370 (34%), Gaps = 24/370 (6%)
Query: 248 QYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL- 305
+ L ++ + S+ + LE L + N+L + + +L+ LDLS N
Sbjct: 79 RVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSHNRLQN-IS--CCPMASLRHLDLSFNDFD 134
Query: 306 SGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP-SLEILFIWNNYFSGSLPENL-GR 363
P+ + F +L L L L + + L S +L + + + G E+L
Sbjct: 135 VLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIP 194
Query: 364 NSKLRWVDVSTNNFNGSIPPDI---CSGGVLFKLILFSNNFTGSLSPSLSNC--SSLVRL 418
N+ + + N+ L + L N ++ +L+ +
Sbjct: 195 NTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNV 254
Query: 419 RLEDNSFSGEIP---LKFSQLPDINYIDLSRNGFTGGIPTD--INQASKLEYFNVSN--N 471
L+ + + +F + Y+++ T I + + L+ + + N
Sbjct: 255 TLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKN 314
Query: 472 PKLGGMIPAQTWSLPSLQNFSASACNITGNL-PPFKSCKSISVIESHMNNLSGTIPESVS 530
A + S + S S + + N + ++ + S
Sbjct: 315 QVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCS 374
Query: 531 NCVELERIDLANNKL--IGSIPEVLARLPVLGVLDLSHNSL-SGQIPAKFGSCSSLTVLN 587
L+ + L N L + + + L LD+S NSL S S+ VLN
Sbjct: 375 TLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLN 434
Query: 588 VSFNDISGSI 597
+S N ++GS+
Sbjct: 435 LSSNMLTGSV 444
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 81.1 bits (200), Expect = 7e-16
Identities = 59/385 (15%), Positives = 127/385 (32%), Gaps = 55/385 (14%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
+PK+L + ++L L +N ++ + S ++ L+ L LS NR+ F ++L
Sbjct: 45 HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDL 102
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN--LGRNSKLRWVDVSTNNF 377
L + +N + + + SL L + N F LP G +KL ++ +S F
Sbjct: 103 EYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKF 158
Query: 378 NGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCS-SLVRLRLEDNS---FSGEIPLKF 433
+ + L ++L ++ + S + L L + FS ++ +
Sbjct: 159 R-QLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSV 217
Query: 434 SQLPDINYIDLSRNGFTGGIPTDIN-------------------------------QASK 462
+ L + ++ N
Sbjct: 218 NALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRP 277
Query: 463 LEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMN--- 519
+EY N+ N + I + ++ S ++ + F +++ + + MN
Sbjct: 278 VEYLNIYNL-TITERIDREEFTYSETALKSLMIEHVKNQVFLFSK-EALYSVFAEMNIKM 335
Query: 520 ---NLSGTIPESVSN-CVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPA 575
+ + I ++ N S+ + + L L L L N L
Sbjct: 336 LSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFK 394
Query: 576 KFGSCSSLTVLNVSFNDISGSIPSG 600
+++ L ++ S+ S
Sbjct: 395 VALMTKNMSSLETLDVSLN-SLNSH 418
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 96.0 bits (239), Expect = 2e-21
Identities = 60/286 (20%), Positives = 111/286 (38%), Gaps = 22/286 (7%)
Query: 107 NLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP 166
S S + P + ++ SLD+S N + +Q NL L SN + ++
Sbjct: 37 KGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIE 92
Query: 167 AEI-SQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAEL-GMLKTV 223
+ S L L+ L+L+ +Y S + S F SL FL+L GN L L +
Sbjct: 93 EDSFSSLGSLEHLDLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKL 151
Query: 224 THMEIGYNFYQGNIPWQ-LGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQL 281
+ +G I + ++ ++ L+I ++L S + L ++ + L L Q
Sbjct: 152 QILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ-SYEPKSLKSIQNVSHLILHMKQH 210
Query: 282 AGQVPWEFSRVTTLKSLDLSDNRLSGP--------IPESFADLKNLRLLSLMYNEMSGTV 333
+ ++++ L+L D L S R + + + V
Sbjct: 211 ILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QV 269
Query: 334 PESLVQLPSLEILFIWNNYFSGSLPEN-LGRNSKLRWVDVSTNNFN 378
+ L Q+ L L N S+P+ R + L+ + + TN ++
Sbjct: 270 MKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 314
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 3e-20
Identities = 52/314 (16%), Positives = 105/314 (33%), Gaps = 49/314 (15%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
SIP L+ ++SL L N++ + R L++L L+ N ++ +SF+ L +L
Sbjct: 45 SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSL 102
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN--LGRNSKLRWVDVSTNNF 377
L L YN +S L SL L + N + +L E +KL+ + V +
Sbjct: 103 EHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDT 161
Query: 378 NGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLP 437
I + + L L ++ + P +
Sbjct: 162 FTKIQRKD-----------------------FAGLTFLEELEIDASDLQSYEPKSLKSIQ 198
Query: 438 DINYIDLSRNGFTGGIPTDI-NQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASAC 496
+++++ L + + S +E + + S
Sbjct: 199 NVSHLILHMKQHIL-LLEIFVDVTSSVECLELRDTD----------LDTFHFSELSTGET 247
Query: 497 NITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPE-VLAR 555
N F++ + + + ++ L ++ + N+L S+P+ + R
Sbjct: 248 NSLIKKFTFRNV-------KITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDR 299
Query: 556 LPVLGVLDLSHNSL 569
L L + L N
Sbjct: 300 LTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 82.5 bits (204), Expect = 7e-17
Identities = 54/295 (18%), Positives = 116/295 (39%), Gaps = 28/295 (9%)
Query: 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAEL 217
S S + S+P+ ++ E +K L+L+ + + S +L+ L L N +N I +
Sbjct: 40 SGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT-IEEDS 95
Query: 218 -GMLKTVTHMEIGYNFYQGNIPWQL-GNMSEVQYLDIAGANLSGSIPKE--LSNLTKLES 273
L ++ H+++ YN+ N+ +S + +L++ G ++ + S+LTKL+
Sbjct: 96 FSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153
Query: 274 LFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332
L + ++ + F+ +T L+ L++ + L P+S ++N+ L L +
Sbjct: 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILL 213
Query: 333 VPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLF 392
+ + S+E L + + L + + F
Sbjct: 214 LEIFVDVTSSVECLELRDTDLDTFHFSEL-----------------STGETNSLIKKFTF 256
Query: 393 KLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRN 447
+ + ++ + L+ S L+ L N F +L + I L N
Sbjct: 257 RNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 3e-14
Identities = 59/320 (18%), Positives = 95/320 (29%), Gaps = 88/320 (27%)
Query: 293 TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNY 352
+KSLDLS+NR++ NL+ L L N ++ +S L SLE L
Sbjct: 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL------ 105
Query: 353 FSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNC 412
+L N L ++
Sbjct: 106 -------DLSYN-YLS-----------NLSSSW-----------------------FKPL 123
Query: 413 SSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNP 472
SSL L L N + L + KL+ V N
Sbjct: 124 SSLTFLNLLGNPYK----------------TLGETSLFSHLT-------KLQILRVGNMD 160
Query: 473 KLGGMIPAQT-WSLPSLQNFSASACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESV 529
I + L L+ A ++ + P KS +++S + HM + E
Sbjct: 161 TFT-KIQRKDFAGLTFLEELEIDASDLQ-SYEPKSLKSIQNVSHLILHMKQHI-LLLEIF 217
Query: 530 -SNCVELERIDLANNKL----IGSIPEV----LARLPVLGVLDLSHNSLSGQIPAKFGSC 580
+E ++L + L + L + + ++ SL Q+
Sbjct: 218 VDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQI 276
Query: 581 SSLTVLNVSFNDISGSIPSG 600
S L L S N + S+P G
Sbjct: 277 SGLLELEFSRNQLK-SVPDG 295
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 5e-10
Identities = 36/202 (17%), Positives = 64/202 (31%), Gaps = 42/202 (20%)
Query: 103 LVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
L L + + + + F LT L L+I ++ + P ++S++N+ L
Sbjct: 151 LQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210
Query: 162 SGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLK 221
+ S+E L L L+ +EL
Sbjct: 211 I-LLLEIF-----------------------VDVTSSVECLELRDTDLDTFHFSEL---- 242
Query: 222 TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 281
L + + I +L + K L+ ++ L L RNQL
Sbjct: 243 ------------STGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQL 289
Query: 282 AGQVPWEFSRVTTLKSLDLSDN 303
F R+T+L+ + L N
Sbjct: 290 KSVPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 5e-09
Identities = 40/216 (18%), Positives = 81/216 (37%), Gaps = 12/216 (5%)
Query: 390 VLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGF 449
V ++ S + S + + +C + S + IP + + +DLS N
Sbjct: 8 VWVLGVIISLSKEESSNQASLSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRI 64
Query: 450 TGGIPTDINQASKLEYFNVSNNPKLGGMIPAQT-WSLPSLQNFSASACNITGNLPP--FK 506
T +D+ + L+ +++N + I + SL SL++ S ++ NL FK
Sbjct: 65 TYISNSDLQRCVNLQALVLTSN-GIN-TIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFK 121
Query: 507 SCKSISVIESHMNNLSGTIPESV-SNCVELERIDLANNKLIGSIPE-VLARLPVLGVLDL 564
S++ + N S+ S+ +L+ + + N I A L L L++
Sbjct: 122 PLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEI 181
Query: 565 SHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG 600
+ L P S +++ L + +
Sbjct: 182 DASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEI 216
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 4e-21
Identities = 48/253 (18%), Positives = 84/253 (33%), Gaps = 32/253 (12%)
Query: 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP 188
+ + P GI + + N S A +L +L L + +
Sbjct: 15 TTSCPQQGLQ-AVPVGIPA--ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARI 71
Query: 189 IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ 248
+ F LE L L+ N + + +
Sbjct: 72 DAAAFTGLALLEQLDLSDNAQLRSVDPAT-----------------------FHGLGRLH 108
Query: 249 YLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLS 306
L + L + L L+ L+L N L +P + F + L L L NR+S
Sbjct: 109 TLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRIS 166
Query: 307 GPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN-LGRNS 365
+F L +L L L N ++ P + L L L+++ N S +LP L
Sbjct: 167 SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTEALAPLR 225
Query: 366 KLRWVDVSTNNFN 378
L+++ ++ N +
Sbjct: 226 ALQYLRLNDNPWV 238
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 7e-20
Identities = 54/255 (21%), Positives = 83/255 (32%), Gaps = 51/255 (20%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAF 157
+ L N S P F +L L + N + L L LD
Sbjct: 30 IPAASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS 88
Query: 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAEL 217
N+ SV F L LHL L + + L
Sbjct: 89 DNAQLRSVDPAT-----------------------FHGLGRLHTLHLDRCGLQE-LGPGL 124
Query: 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFL 276
++ +QYL + L ++P + +L L LFL
Sbjct: 125 -----------------------FRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFL 160
Query: 277 FRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336
N+++ F + +L L L NR++ P +F DL L L L N +S E+
Sbjct: 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEA 220
Query: 337 LVQLPSLEILFIWNN 351
L L +L+ L + +N
Sbjct: 221 LAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 1e-15
Identities = 47/226 (20%), Positives = 83/226 (36%), Gaps = 26/226 (11%)
Query: 413 SSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNP 472
++ R+ L N S F ++ + L N + LE ++S+N
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 473 KLGGMIPAQTWS-LPSLQNFSASACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESV 529
+L + T+ L L C + L P F+ ++ + N L +P+
Sbjct: 92 QLR-SVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQ-ALPDDT 148
Query: 530 -SNCVELERIDLANNKLIGSIPE-VLARLPVLGVLDLSHNSLSGQIPAK-FGSCSSLTVL 586
+ L + L N+ I S+PE L L L L N ++ + F L L
Sbjct: 149 FRDLGNLTHLFLHGNR-ISSVPERAFRGLHSLDRLLLHQNRVA-HVHPHAFRDLGRLMTL 206
Query: 587 NVSFNDISGSIPSG--------KVLRLMGSSAYAGNPKLCGAPLQP 624
+ N++S ++P+ + LRL NP +C +P
Sbjct: 207 YLFANNLS-ALPTEALAPLRALQYLRL------NDNPWVCDCRARP 245
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 1e-20
Identities = 53/263 (20%), Positives = 94/263 (35%), Gaps = 48/263 (18%)
Query: 715 GITVSVKKIEWGATRI--KIVSEFITRIG---TVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
G V+VK + + ++H N+I L G C L+ ++
Sbjct: 30 GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89
Query: 770 NGNLSEKIRTKR-DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH- 827
G L+ + KR + +ARG+ +LH + I H DLK+SNI+ + +E
Sbjct: 90 GGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGD 149
Query: 828 -------LAEFGF-KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMY---MDVYGFGEI 874
+ +FG + + S AW E ++ M+ DV+ +G +
Sbjct: 150 LSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPE------VIRASMFSKGSDVWSYG-V 202
Query: 875 IL-EILTNGRLTNAGSSLQNKPIDGL-----LGEMYNENE-VGSSSSLQDEIKLVLDVAL 927
+L E+LT P G+ + + S+ + ++
Sbjct: 203 LLWELLTG-----------EVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLM---E 248
Query: 928 LCTRSTPSDRPSMEEALKLLSGL 950
C P RPS L L+ +
Sbjct: 249 DCWNPDPHSRPSFTNILDQLTTI 271
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 92.7 bits (230), Expect = 1e-20
Identities = 50/281 (17%), Positives = 88/281 (31%), Gaps = 46/281 (16%)
Query: 80 INLSMKGLSGALPGKPLRIF-FNELVDLNLSHNSFSGQFPVEIFNLT--SLISLDISRNN 136
+ + + + LR+ + L +L L + +G P + T L L++ +
Sbjct: 73 LTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVS 132
Query: 137 FSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSF 196
++ + L+ L LKVL++A ++ Q F
Sbjct: 133 WAT-RDAWLAELQQWL-------------------KPGLKVLSIAQAHSLNFSCEQVRVF 172
Query: 197 KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGAN 256
+L L L+ N + P + + + +
Sbjct: 173 PALSTLDLSDNPELGERG-----------------LISALCPLKFPTLQVLALRNAGMET 215
Query: 257 LSGSIPKELSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFAD 315
SG + +L+ L L N L + L SL+LS L A
Sbjct: 216 PSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLPA- 274
Query: 316 LKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGS 356
L +L L YN + P +LP + L + N F S
Sbjct: 275 --KLSVLDLSYNRLD-RNPSPD-ELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 81.1 bits (200), Expect = 1e-16
Identities = 64/352 (18%), Positives = 106/352 (30%), Gaps = 78/352 (22%)
Query: 255 ANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPW-EFSRVTTLKSLDLSDNRLSGPIPES 312
N G+ EL LE L + A + + + +LK L + R+ I
Sbjct: 28 FNCLGAADVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFG 87
Query: 313 FADLKN---LRLLSLMYNEMSGTVPESLVQL--PSLEILFIWNNYFSGSLPENLGRNSKL 367
+ L+ L+L E++GT P L++ P L IL + N ++
Sbjct: 88 ALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRD---------- 137
Query: 368 RWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSG 427
+ + + G L L + + + +L L L DN G
Sbjct: 138 --------AWLAELQQWLKPG--LKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELG 187
Query: 428 EIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNP--KLGGMIPAQTWSL 485
E L + P + L+ + N G+ A +
Sbjct: 188 ERGLISALCP--------------------LKFPTLQVLALRNAGMETPSGVCSALAAAR 227
Query: 486 PSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESV-SNCVELERIDLANNK 544
LQ S N+L +L ++L+
Sbjct: 228 VQLQGLDLS-----------------------HNSLRDAAGAPSCDWPSQLNSLNLSFTG 264
Query: 545 LIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGS 596
L +P+ L L VLDLS+N L P + L++ N S
Sbjct: 265 L-KQVPKGL--PAKLSVLDLSYNRLDR-NP-SPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 68.4 bits (167), Expect = 2e-12
Identities = 44/223 (19%), Positives = 77/223 (34%), Gaps = 33/223 (14%)
Query: 391 LFKLILFSNNFTGSLSPS-LSNCSSLVRLRLEDNSFSGEIP---LKFSQLPDINYIDLSR 446
L L+ + + + SL RL + I L+ + + + L
Sbjct: 45 LEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLEN 104
Query: 447 NGFTGGIPTDINQAS--KLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPP 504
TG P + +A+ L N+ N + L LQ +
Sbjct: 105 LEVTGTAPPPLLEATGPDLNILNLRNV-----SWATRDAWLAELQQWL------------ 147
Query: 505 FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLA----RLPVLG 560
K +S+ ++H N S E V L +DL++N +G + A + P L
Sbjct: 148 KPGLKVLSIAQAHSLNFS---CEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQ 204
Query: 561 VLDLSHN---SLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG 600
VL L + + SG A + L L++S N + + +
Sbjct: 205 VLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAP 247
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 37/200 (18%), Positives = 66/200 (33%), Gaps = 24/200 (12%)
Query: 408 SLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFN 467
S NC + L S E LK +D + TDI ++ L+
Sbjct: 26 SAFNCLGAADVELYGGGRSLEYLLK--------RVDTEADLGQ---FTDIIKSLSLKRLT 74
Query: 468 VSNNPKLGGMIPA--QTWSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGT 524
V ++ + + LQ + +TG PP + ++ N+S
Sbjct: 75 VRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWA 134
Query: 525 IPESVSNCVE------LERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFG 578
++ ++ L+ + +A + E + P L LDLS N G+
Sbjct: 135 TRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194
Query: 579 SC----SSLTVLNVSFNDIS 594
C +L VL + +
Sbjct: 195 LCPLKFPTLQVLALRNAGME 214
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 2e-20
Identities = 58/264 (21%), Positives = 102/264 (38%), Gaps = 55/264 (20%)
Query: 715 GITVSVKKIEWGATRIKIVSEFITRIG---TVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771
G V+VK + + V+EF+ + +RH N++ +G ++ +YL G
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 772 NL-----SEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826
+L R + D + + VA+G+ +LH+ P I H +LK+ N++ D+
Sbjct: 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTV 178
Query: 827 HLAEFG---FKYLTQLADGSFPAKIAWTESGEFYNA---MKEEMY---MDVYGFGEIIL- 876
+ +FG K T L+ S W A +++E DVY FG +IL
Sbjct: 179 KVCDFGLSRLKASTFLSSKSAAGTPEWM-------APEVLRDEPSNEKSDVYSFG-VILW 230
Query: 877 EILTNGRLTNAGSSLQNKPIDGL-----LGEMYNENE-----VGSSSSLQDEIKLVLDVA 926
E+ T +P L + + + + + + I+
Sbjct: 231 ELATL-----------QQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIE------ 273
Query: 927 LLCTRSTPSDRPSMEEALKLLSGL 950
C + P RPS + LL L
Sbjct: 274 -GCWTNEPWKRPSFATIMDLLRPL 296
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 2e-20
Identities = 59/263 (22%), Positives = 104/263 (39%), Gaps = 57/263 (21%)
Query: 715 GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774
V++K+IE + R + E + ++ V H N+++L G C + L+ +Y G+L
Sbjct: 31 AKDVAIKQIESESERKAFIVE-LRQLSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLY 87
Query: 775 EKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-PHL 828
+ A L ++G+ +LH A+ H DLK N++ +
Sbjct: 88 NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKI 147
Query: 829 AEFGF-----KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM--------DVYGFGEII 875
+FG ++T GS AW M E++ DV+ +G I+
Sbjct: 148 CDFGTACDIQTHMTNNK-GSA----AW---------MAPEVFEGSNYSEKCDVFSWGIIL 193
Query: 876 LEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS-------SSLQDEIKLVLDVALL 928
E++T KP D + G + + +L I+ ++
Sbjct: 194 WEVITR-----------RKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT---R 239
Query: 929 CTRSTPSDRPSMEEALKLLSGLK 951
C PS RPSMEE +K+++ L
Sbjct: 240 CWSKDPSQRPSMEEIVKIMTHLM 262
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 2e-20
Identities = 57/289 (19%), Positives = 116/289 (40%), Gaps = 25/289 (8%)
Query: 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182
L + I + ++N + L + L AF + ++ + L +L L L
Sbjct: 17 ALANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKD 72
Query: 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG 242
+ + P + + L L+GN L + + A + L+++ +++ P L
Sbjct: 73 NQITDLAP--LKNLTKITELELSGNPLKN-VSA-IAGLQSIKTLDLTSTQITDVTP--LA 126
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
+S +Q L + ++ +I L+ LT L+ L + Q++ P + ++ L +L D
Sbjct: 127 GLSNLQVLYLDLNQIT-NIS-PLAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADD 182
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362
N++S A L NL + L N++ + L +L I+ + N + + +
Sbjct: 183 NKISD--ISPLASLPNLIEVHLKNNQI--SDVSPLANTSNLFIVTLTNQTITN---QPVF 235
Query: 363 RNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSN 411
N+ L +V I P + S N T +L+ ++N
Sbjct: 236 YNNNLVVPNVVKGPSGAPIAPAT----ISDNGTYASPNLTWNLTSFINN 280
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 2e-17
Identities = 57/272 (20%), Positives = 113/272 (41%), Gaps = 24/272 (8%)
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
++ + L G ++ +I + L L L L NQ+ P +T + L+L
Sbjct: 37 QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELEL 92
Query: 301 SDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN 360
S N L + A L++++ L L +++ L L +L++L++ N +
Sbjct: 93 SGNPLK--NVSAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI--SP 146
Query: 361 LGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRL 420
L + L+++ + + + P + + L L N + +SP L++ +L+ + L
Sbjct: 147 LAGLTNLQYLSIGNAQVS-DLTP-LANLSKLTTLKADDNKIS-DISP-LASLPNLIEVHL 202
Query: 421 EDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPA 480
++N S PL + ++ + L+ T + + L NV P G I
Sbjct: 203 KNNQISDVSPL--ANTSNLFIVTLTNQTITN---QPVFYNNNLVVPNVVKGPS-GAPIAP 256
Query: 481 QTWSLPSLQNFSASACNITGNLPPFKSCKSIS 512
T S N + ++ N+T NL F + S +
Sbjct: 257 ATIS----DNGTYASPNLTWNLTSFINNVSYT 284
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 2e-15
Identities = 50/330 (15%), Positives = 99/330 (30%), Gaps = 68/330 (20%)
Query: 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSL 324
L + ++ + V + + + +L ++ E L NL L L
Sbjct: 15 DPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLEL 70
Query: 325 MYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD 384
N++ T L L + L + N + ++ +D+++ + P
Sbjct: 71 KDNQI--TDLAPLKNLTKITELELSGNPLKN--VSAIAGLQSIKTLDLTSTQIT-DVTP- 124
Query: 385 ICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDL 444
L+ S+L L L+ N + PL + L ++ Y+ +
Sbjct: 125 ------------------------LAGLSNLQVLYLDLNQITNISPL--AGLTNLQYLSI 158
Query: 445 SRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPP 504
Q S L +L L A I+ ++ P
Sbjct: 159 GNA-----------QVSDLTPLA----------------NLSKLTTLKADDNKIS-DISP 190
Query: 505 FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDL 564
S ++ + N +S ++N L + L N + L V +
Sbjct: 191 LASLPNLIEVHLKNNQISDV--SPLANTSNLFIVTLTNQTITNQPVFYNNNLVVP--NVV 246
Query: 565 SHNSLSGQIPAKFGSCSSLTVLNVSFNDIS 594
S + PA + N+++N S
Sbjct: 247 KGPSGAPIAPATISDNGTYASPNLTWNLTS 276
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 4e-12
Identities = 45/233 (19%), Positives = 91/233 (39%), Gaps = 16/233 (6%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
N L+ L L N + P++ NLT + L++S N I L+++ LD S
Sbjct: 62 LNNLIGLELKDNQITDLAPLK--NLTKITELELSGNPLKNVSA--IAGLQSIKTLDLTST 117
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ P ++ L +L+VL L + + P +L++L + ++D + L
Sbjct: 118 QITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LAN 171
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L +T ++ N +I L ++ + + + +S P L+N + L + L
Sbjct: 172 LSKLTTLKADDNKIS-DIS-PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQ 227
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332
+ Q + + + + P + +D +L +N S
Sbjct: 228 TITNQPVFYNNNLVVPNVVKGPSGAPI--APATISDNGTYASPNLTWNLTSFI 278
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 1e-19
Identities = 53/250 (21%), Positives = 95/250 (38%), Gaps = 27/250 (10%)
Query: 717 TVSVKKIEWGATRIKIVSEFITRIGT---VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773
V+VK + A + + F +G RH N++ +G+ Q ++ + +L
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL 106
Query: 774 SEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830
+ + I ARG+ +LH +I H DLK++NI E+ + +
Sbjct: 107 YHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGD 163
Query: 831 FG---FKYLTQLADGSFPAK--IAWTESGEFYNAMKEEMY---MDVYGFGEIIL-EILTN 881
FG K + I W + E Y DVY FG I+L E++T
Sbjct: 164 FGLATEKSRWSGSHQFEQLSGSILWM-APEVIRMQDSNPYSFQSDVYAFG-IVLYELMT- 220
Query: 882 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTPSDRPSM 940
G+L + + D ++ + + S ++ K + + C + +RPS
Sbjct: 221 GQLPYSNIN----NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSF 276
Query: 941 EEALKLLSGL 950
L + L
Sbjct: 277 PRILAEIEEL 286
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 90.2 bits (224), Expect = 2e-19
Identities = 56/284 (19%), Positives = 95/284 (33%), Gaps = 60/284 (21%)
Query: 715 GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYDYLPN 770
G V+VK I + +RH+N++ + Q YL+ DY N
Sbjct: 60 GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHEN 119
Query: 771 GNLSEKIRTKR-DWAAKYKIVLGVARGLCFLH-----HDCYPAIPHGDLKASNIVFDENM 824
G+L + +++ D + K+ GLC LH PAI H DLK+ NI+ +N
Sbjct: 120 GSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG 179
Query: 825 EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEM----YM-------------- 866
+A+ G A +++ E + YM
Sbjct: 180 TCCIADLGL------------AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHF 227
Query: 867 ------DVYGFGEIIL-EILTNGRLTNAGSSLQN-----KPIDGLLGEMY----NEN--- 907
D+Y FG +IL E+ Q P D +M +
Sbjct: 228 QSYIMADMYSFG-LILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRP 286
Query: 908 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951
+ S + ++ + + C P+ R + K L+ +
Sbjct: 287 SFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 8e-19
Identities = 50/269 (18%), Positives = 87/269 (32%), Gaps = 48/269 (17%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
TG + +K++ + F+ + + H N+++ +G Y + + +Y+
Sbjct: 34 TGEVMVMKELIRFDE--ETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKG 91
Query: 771 GNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
G L I++ W+ + +A G+ +LH I H DL + N + EN
Sbjct: 92 GTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI--I-HRDLNSHNCLVRENKNVV 148
Query: 828 LAEFGF--------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM--------DVYGF 871
+A+FG L P + M EM DV+ F
Sbjct: 149 VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSF 208
Query: 872 GEIIL-EILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQDEI-----KLVLD 924
G I+L EI+ L + + L
Sbjct: 209 G-IVLCEIIGRVN-----------ADPDYL--PRTMDFGLNVRGFLDRYCPPNCPPSFFP 254
Query: 925 VALLCTRSTPSDRPSMEEALKLLSGLKPH 953
+ + C P RPS + L L+ H
Sbjct: 255 ITVRCCDLDPEKRPSFVKLEHWLETLRMH 283
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 86.8 bits (215), Expect = 2e-18
Identities = 58/281 (20%), Positives = 95/281 (33%), Gaps = 54/281 (19%)
Query: 715 GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDYLPN 770
G V+VK R I + +RH+N++ + + Q +L+ DY +
Sbjct: 65 GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 124
Query: 771 GNLSEKIRTKR-DWAAKYKIVLGVARGLCFLHHD-----CYPAIPHGDLKASNIVFDENM 824
G+L + + K+ L A GL LH + PAI H DLK+ NI+ +N
Sbjct: 125 GSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 184
Query: 825 EPHLAEFGF-KYLTQLADGSFPAKIAWT--------ESGEFYNAMKEEMY---MDVYGFG 872
+A+ G D A E + MK D+Y G
Sbjct: 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 244
Query: 873 EIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD-------- 924
+ EI R + G + Y + V S S+++ K+V +
Sbjct: 245 LVFWEIAR--RCSIGGIHEDYQL-------PY-YDLVPSDPSVEEMRKVVCEQKLRPNIP 294
Query: 925 -----------VALLCTR---STPSDRPSMEEALKLLSGLK 951
+A + + + R + K LS L
Sbjct: 295 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 4e-18
Identities = 53/293 (18%), Positives = 98/293 (33%), Gaps = 80/293 (27%)
Query: 715 GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC----YNRHQAYLLYDYLPN 770
G V+VK + + +RH+N++ + ++ Q +L+ Y
Sbjct: 31 GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90
Query: 771 GNLSEKIRTKR-DWAAKYKIVLGVARGLCFLHHDCY-----PAIPHGDLKASNIVFDENM 824
G+L + ++ D + +IVL +A GL LH + + PAI H DLK+ NI+ +N
Sbjct: 91 GSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG 150
Query: 825 EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEM----YM-------------- 866
+ +A+ G A + + + + YM
Sbjct: 151 QCCIADLGL------------AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCF 198
Query: 867 ------DVYGFGEIIL-EILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919
D++ FG ++L E+ + + V + S +D
Sbjct: 199 DSYKRVDIWAFG-LVLWEVARRMVSNGIVEDYK----------PPFYDVVPNDPSFEDMR 247
Query: 920 KLVLD--------------------VALL--CTRSTPSDRPSMEEALKLLSGL 950
K+V L+ C PS R + K L+ +
Sbjct: 248 KVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 5e-18
Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 10/185 (5%)
Query: 195 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAG 254
+FK+ L + + A++ ++T++ + + ++ L I
Sbjct: 21 TFKAYLNGLLGQSSTANITEAQM---NSLTYITLANINVTDLTG--IEYAHNIKDLTINN 75
Query: 255 ANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFA 314
+ + P +S L+ LE L + + S +T+L LD+S + I
Sbjct: 76 IHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKIN 133
Query: 315 DLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVST 374
L + + L YN T L LP L+ L I + + KL + +
Sbjct: 134 TLPKVNSIDLSYNGAI-TDIMPLKTLPELKSLNIQFDGVHDY--RGIEDFPKLNQLYAFS 190
Query: 375 NNFNG 379
G
Sbjct: 191 QTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 1e-16
Identities = 27/163 (16%), Positives = 59/163 (36%), Gaps = 7/163 (4%)
Query: 266 SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325
+ + L + L + +K L +++ + + L NL L +M
Sbjct: 41 AQMNSLTYITLANINVTDLTG--IEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIM 96
Query: 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDI 385
+++ +L L SL +L I ++ S+ + K+ +D+S N I P +
Sbjct: 97 GKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP-L 155
Query: 386 CSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGE 428
+ L L + + + + L +L + G+
Sbjct: 156 KTLPELKSLNIQFDGVH-DYRG-IEDFPKLNQLYAFSQTIGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 5e-16
Identities = 31/208 (14%), Positives = 70/208 (33%), Gaps = 34/208 (16%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
F ++ L +S + + + SL + ++ N + GI+ N+ L +
Sbjct: 22 FKAYLNGLLGQSSTA---NITEAQMNSLTYITLANINVTD--LTGIEYAHNIKDLTINNI 76
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ + L +LE L + G + L
Sbjct: 77 --------HATNYNPISGL------------------SNLERLRIMGKDVTSDKIPNLSG 110
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L ++T ++I ++ + +I ++ + +V +D++ I L L +L+SL + +
Sbjct: 111 LTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFD 169
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSG 307
+ L L + G
Sbjct: 170 GVHDYRG--IEDFPKLNQLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 4e-14
Identities = 34/187 (18%), Positives = 69/187 (36%), Gaps = 12/187 (6%)
Query: 410 SNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVS 469
S + + L +S + + +Q+ + YI L+ T T I A ++ ++
Sbjct: 20 STFKAYLNGLLGQSSTA---NITEAQMNSLTYITLANINVTD--LTGIEYAHNIKDLTIN 74
Query: 470 NNPKLGGMIPAQTWSLPSLQNFSASACNITGN-LPPFKSCKSISVIESHMNNLSGTIPES 528
N P L +L+ ++T + +P S+++++ + +I
Sbjct: 75 NI-HATNYNPIS--GLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTK 131
Query: 529 VSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNV 588
++ ++ IDL+ N I I L LP L L++ + + L L
Sbjct: 132 INTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYA 188
Query: 589 SFNDISG 595
I G
Sbjct: 189 FSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 5e-10
Identities = 22/115 (19%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Query: 485 LPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNK 544
+ SL + + N+T +L + +I + + + + +S LER+ +
Sbjct: 43 MNSLTYITLANINVT-DLTGIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKD 99
Query: 545 LIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPS 599
+ L+ L L +LD+SH++ I K + + +++S+N I
Sbjct: 100 VTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP 154
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 7e-09
Identities = 23/181 (12%), Positives = 61/181 (33%), Gaps = 31/181 (17%)
Query: 391 LFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFT 450
L + L + N T L+ + ++ L + + + P+ S L ++ + + T
Sbjct: 46 LTYITLANINVT-DLTG-IEYAHNIKDLTINNIHATNYNPI--SGLSNLERLRIMGKDVT 101
Query: 451 GGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKS 510
+++ + L ++S++ I + +LP + + S ++ P K+
Sbjct: 102 SDKIPNLSGLTSLTLLDISHS-AHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPE 160
Query: 511 ISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLS 570
L+ +++ + + + P L L ++
Sbjct: 161 ------------------------LKSLNIQFDG-VHDY-RGIEDFPKLNQLYAFSQTIG 194
Query: 571 G 571
G
Sbjct: 195 G 195
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 6e-18
Identities = 62/271 (22%), Positives = 107/271 (39%), Gaps = 58/271 (21%)
Query: 713 PTGITVSVKKIEWG-----ATRIKIVSEFITRIG---TVRHKNLIRLLGFCYNRHQAYLL 764
V++K + G I+ EF + + H N+++L G +N ++
Sbjct: 42 KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN--PPRMV 99
Query: 765 YDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
+++P G+L ++ K W+ K +++L +A G+ ++ + P I H DL++ NI
Sbjct: 100 MEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQ 158
Query: 822 ENMEPH-----LAEFGF-----KYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDV 868
E +A+FG ++ L G+F W + E A +EE Y D
Sbjct: 159 SLDENAPVCAKVADFGLSQQSVHSVSGLL-GNF----QWM-APETIGA-EEESYTEKADT 211
Query: 869 YGFGEIIL-EILTNGRLTNAGSSLQNKPIDGL-LGEMYNENEVGSS-------SSLQDEI 919
Y F +IL ILT P D G++ N + +
Sbjct: 212 YSFA-MILYTILTG-----------EGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950
+ V++ LC P RP +K LS L
Sbjct: 260 RNVIE---LCWSGDPKKRPHFSYIVKELSEL 287
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 84.4 bits (208), Expect = 6e-17
Identities = 59/341 (17%), Positives = 120/341 (35%), Gaps = 49/341 (14%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
+ + FP + I ++ + + + L ++ + A ++
Sbjct: 1 MGETITVSTPIKQIFPDD--AFAETIKDNLKKKSVTD--AVTQNELNSIDQIIANNS--- 53
Query: 163 GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT 222
+I ++ ++ ++ L L GN L D P L LK
Sbjct: 54 -----DIKSVQGIQ------------------YLPNVTKLFLNGNKLTDIKP--LTNLKN 88
Query: 223 VTHMEIGYNFYQGNIP--WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ 280
+ + + N I L ++ +++ L + +S I L +L +LESL+L N+
Sbjct: 89 LGWLFLDEN----KIKDLSSLKDLKKLKSLSLEHNGIS-DIN-GLVHLPQLESLYLGNNK 142
Query: 281 LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340
+ SR+T L +L L DN++S A L L+ L L N + + +L L
Sbjct: 143 ITDITV--LSRLTKLDTLSLEDNQISD--IVPLAGLTKLQNLYLSKNHI--SDLRALAGL 196
Query: 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNN 400
+L++L +++ + V + + P I G K + +
Sbjct: 197 KNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLV--TPEIISDDGDYEKPNVKWHL 254
Query: 401 FTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINY 441
+ S V + F G + ++ ++Y
Sbjct: 255 PEFTNEVSF-IFYQPVTIGKAKARFHGRVTQPLKEVYTVSY 294
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 79.0 bits (194), Expect = 3e-15
Identities = 52/300 (17%), Positives = 101/300 (33%), Gaps = 34/300 (11%)
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
+E ++ +++ ++ + L ++ + + + + + L L
Sbjct: 17 DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFL 72
Query: 301 SDNRLS--GPIP------------------ESFADLKNLRLLSLMYNEMSGTVPESLVQL 340
+ N+L+ P+ S DLK L+ LSL +N + + LV L
Sbjct: 73 NGNKLTDIKPLTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGI--SDINGLVHL 130
Query: 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNN 400
P LE L++ NN + L R +KL + + N + I P + L L L S N
Sbjct: 131 PQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQIS-DIVP-LAGLTKLQNLYL-SKN 185
Query: 401 FTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQA 460
L L+ +L L L + S L N + + + P I+
Sbjct: 186 HISDLRA-LAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDG--SLVTPEIISDD 242
Query: 461 SKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNN 520
E NV + + + P + + + P + ++ +
Sbjct: 243 GDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLKEVYTVSYDVDGTVIK 302
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 73.2 bits (179), Expect = 2e-13
Identities = 45/300 (15%), Positives = 91/300 (30%), Gaps = 44/300 (14%)
Query: 295 LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS 354
+ + P +L ++ V +L S++ + N+
Sbjct: 1 MGETITVSTPIKQIFP--DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK 56
Query: 355 GSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSS 414
S+ + + + + ++ N I P + + L L L N LS L +
Sbjct: 57 -SV-QGIQYLPNVTKLFLNGNKLT-DIKP-LTNLKNLGWLFLDENKIK-DLSS-LKDLKK 110
Query: 415 LVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKL 474
L L LE N S +I LP + + L N I + L
Sbjct: 111 LKSLSLEHNGIS-DIN-GLVHLPQLESLYLGNNK--------ITDITVLS---------- 150
Query: 475 GGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVE 534
L L S I+ ++ P + + N++ + +++
Sbjct: 151 ---------RLTKLDTLSLEDNQIS-DIVPLAGLTKLQNLYLSKNHI--SDLRALAGLKN 198
Query: 535 LERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDIS 594
L+ ++L + + + + L V + + SL P NV ++
Sbjct: 199 LDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL--VTPEIISDDGDYEKPNVKWHLPE 256
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 72.1 bits (176), Expect = 5e-13
Identities = 50/262 (19%), Positives = 102/262 (38%), Gaps = 17/262 (6%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
N + + +++ ++ L ++ L ++ N + P + +L+NL L N
Sbjct: 42 LNSIDQIIANNSDIKSVQGIQ--YLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDEN 97
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ L+ LK L+L + S I LE L+L N + D I L
Sbjct: 98 KIKDLSS--LKDLKKLKSLSLEHNGISD-ING-LVHLPQLESLYLGNNKITD-ITV-LSR 151
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L + + + N +I L ++++Q L ++ ++S + + L+ L L+ L LF
Sbjct: 152 LTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLYLSKNHIS-DL-RALAGLKNLDVLELFSQ 207
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
+ + S + ++ +D L P S D + ++ ++ T S +
Sbjct: 208 ECLNKPINHQSNLVVPNTVKNTDGSLVTPEIIS--DDGDYEKPNVKWHLPEFTNEVSFIF 265
Query: 340 LPSLEILFIWNNYFSGSLPENL 361
+ I F G + + L
Sbjct: 266 YQPVTIGKA-KARFHGRVTQPL 286
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 2e-16
Identities = 41/260 (15%), Positives = 86/260 (33%), Gaps = 40/260 (15%)
Query: 717 TVSVKKIEWGATRIKIVSEFITRIGT---VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773
V+++ I+ + F + RH+N++ +G C + ++ L
Sbjct: 57 EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116
Query: 774 SEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830
+R + D +I + +G+ +LH I H DLK+ N+ +D N + + +
Sbjct: 117 YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITD 172
Query: 831 FG---FKYLTQLADGSFPAK-----IAWT-----ESGEFYNAMKEEMY---MDVYGFGEI 874
FG + Q + + + + DV+ G
Sbjct: 173 FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALG-T 231
Query: 875 IL-EILTNGRLTNAGSSLQNKPIDGLLGEMY--NENEVGSSSSLQDEIKLVLDVALLCTR 931
I E+ + I +G N +++G + D + C
Sbjct: 232 IWYELHA-REWPFKTQPAEA--IIWQMGTGMKPNLSQIGMGKEISDILL-------FCWA 281
Query: 932 STPSDRPSMEEALKLLSGLK 951
+RP+ + + +L L
Sbjct: 282 FEQEERPTFTKLMDMLEKLP 301
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 6e-16
Identities = 44/223 (19%), Positives = 81/223 (36%), Gaps = 24/223 (10%)
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295
N+P + LD++ L + +L+ L L R ++ + ++ L
Sbjct: 25 NLP------FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHL 78
Query: 296 KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355
+L L+ N + +F+ L +L+ L + ++ + L +L+ L + +N
Sbjct: 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ- 137
Query: 356 SLPE-----NLGRNSKLRWVDVSTNNFNGSIPPDICSG-----GVLFKLILFSNNFTGSL 405
S NL + L +D+S+N SI + L L N +
Sbjct: 138 SFKLPEYFSNL---TNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMN-FI 192
Query: 406 SPSLSNCSSLVRLRLEDNSFSGEIPLK-FSQLPDINYIDLSRN 447
P L L L+ N +P F +L + I L N
Sbjct: 193 QPGAFKEIRLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 2e-13
Identities = 55/253 (21%), Positives = 90/253 (35%), Gaps = 58/253 (22%)
Query: 106 LNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS 164
L+LS N F + L LD+SR G QSL +L L N S
Sbjct: 33 LDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-S 90
Query: 165 VPAEI-SQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAELGMLKT 222
+ S L L+ L + + + + G K+L+ L++A NL+
Sbjct: 91 LALGAFSGLSSLQKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLI------------- 136
Query: 223 VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282
Q + SNLT LE L L N++
Sbjct: 137 -------------------------QSFKLPEY---------FSNLTNLEHLDLSSNKIQ 162
Query: 283 GQVPWEFSRVTTLK----SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338
+ + + SLDLS N ++ P +F ++ L+ L+L N++
Sbjct: 163 SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLKELALDTNQLKSVPDGIFD 221
Query: 339 QLPSLEILFIWNN 351
+L SL+ +++ N
Sbjct: 222 RLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 54/282 (19%), Positives = 88/282 (31%), Gaps = 82/282 (29%)
Query: 293 TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL-VQLPSLEILFIWNN 351
+ K+LDLS N L SF L++L L E+ T+ + L L L + N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGN 86
Query: 352 YFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGSLSPSL- 409
++ S+ SG L KL+ N SL
Sbjct: 87 --------------PIQ-----------SLALGAFSGLSSLQKLVAVETNLA-SLENFPI 120
Query: 410 SNCSSLVRLRLEDNSFSGEIPLK--FSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFN 467
+ +L L + N L FS L ++ ++DLS N
Sbjct: 121 GHLKTLKELNVAHNLIQ-SFKLPEYFSNLTNLEHLDLSSNKIQ----------------- 162
Query: 468 VSNNPKLGGMIPAQT-WSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIP 526
I L + + S ++ +N ++ I
Sbjct: 163 ---------SIYCTDLRVLHQMPLLNLS-------------------LDLSLNPMN-FIQ 193
Query: 527 ESVSNCVELERIDLANNKLIGSIPE-VLARLPVLGVLDLSHN 567
+ L+ + L N+L S+P+ + RL L + L N
Sbjct: 194 PGAFKEIRLKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 38/198 (19%), Positives = 62/198 (31%), Gaps = 40/198 (20%)
Query: 413 SSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDI-NQASKLEYFNVSNN 471
S L L N F P++ +DLSR I S L ++ N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGN 86
Query: 472 PKLGGMIPAQT-WSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESV- 529
+ + L SLQ A N+ ++
Sbjct: 87 -PIQ-SLALGAFSGLSSLQKLVAVETNLA------------------------SLENFPI 120
Query: 530 SNCVELERIDLANNKLIGSIPE--VLARLPVLGVLDLSHNSLSGQIPAK-FGSCSSLTV- 585
+ L+ +++A+N I S + L L LDLS N + I + +
Sbjct: 121 GHLKTLKELNVAHNL-IQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLL 178
Query: 586 ---LNVSFNDISGSIPSG 600
L++S N ++ I G
Sbjct: 179 NLSLDLSLNPMN-FIQPG 195
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 7e-16
Identities = 39/189 (20%), Positives = 81/189 (42%), Gaps = 8/189 (4%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
++P ++ + +L+L+ + + + L L+L L ++ + L +
Sbjct: 24 ALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVDGT-LPVL 79
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLA 282
+++ +N Q ++P + + LD++ L+ S+P L +L+ L+L N+L
Sbjct: 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELK 137
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342
P + L+ L L++N L+ L+NL L L N + T+P+
Sbjct: 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHL 196
Query: 343 LEILFIWNN 351
L F+ N
Sbjct: 197 LPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 5e-10
Identities = 56/267 (20%), Positives = 85/267 (31%), Gaps = 65/267 (24%)
Query: 62 ACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEI 121
C V ++ V N + L+ ALP + + L+LS N +
Sbjct: 3 ICE---VSKVASHLEV---NCDKRNLT-ALPP---DLPKD-TTILHLSENLLYTFSLATL 51
Query: 122 FNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181
T L L++ R + G +L L LD N S+P L L VL+++
Sbjct: 52 MPYTRLTQLNLDRAELTKLQVDG--TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108
Query: 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQL 241
+ + L+ L+L GN L +P L
Sbjct: 109 FNRLTSLPLGALRGLGELQELYLKGNELKT-LPPGL------------------------ 143
Query: 242 GNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDL 300
L+ KLE L L N L ++P + + L +L L
Sbjct: 144 -----------------------LTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLL 179
Query: 301 SDNRLSGPIPESFADLKNLRLLSLMYN 327
+N L IP+ F L L N
Sbjct: 180 QENSLYT-IPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 52/227 (22%), Positives = 84/227 (37%), Gaps = 41/227 (18%)
Query: 370 VDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPS-LSNCSSLVRLRLEDNSFSGE 428
V+ N ++PPD+ L L N + S + L + L +L L+ + +
Sbjct: 15 VNCDKRNL-TALPPDLPKD--TTILHLSENLLY-TFSLATLMPYTRLTQLNLDRAELT-K 69
Query: 429 IPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSL 488
+ + LP + +DLS N +P +LP+L
Sbjct: 70 LQV-DGTLPVLGTLDLSHNQLQ--------------------------SLPLLGQTLPAL 102
Query: 489 QNFSASACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESV-SNCVELERIDLANNKL 545
S +T +LP + + + N L T+P + + +LE++ LANN L
Sbjct: 103 TVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNNL 160
Query: 546 IGSIPE-VLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFN 591
+P +L L L L L NSL IP F L + N
Sbjct: 161 -TELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 3e-07
Identities = 33/172 (19%), Positives = 57/172 (33%), Gaps = 39/172 (22%)
Query: 433 FSQLPDINYIDLSRNGFT---GGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQ 489
S++ ++ + T +P D ++S N L A L
Sbjct: 6 VSKVASHLEVNCDKRNLTALPPDLPKD------TTILHLSEN-LLYTFSLATLMPYTRLT 58
Query: 490 NFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSI 549
+ +T L L +DL++N+L S+
Sbjct: 59 QLNLDRAELT-KLQVD------------------------GTLPVLGTLDLSHNQL-QSL 92
Query: 550 PEVLARLPVLGVLDLSHNSLSGQIPAK-FGSCSSLTVLNVSFNDISGSIPSG 600
P + LP L VLD+S N L+ +P L L + N++ ++P G
Sbjct: 93 PLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELK-TLPPG 142
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 4e-04
Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 10/140 (7%)
Query: 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
L L+LSHN P+ L +L LD+S N + G ++ L L L N
Sbjct: 78 VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL 136
Query: 162 SGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGML 220
++P + + L+ L+LA + + ++L+ L L N L IP
Sbjct: 137 K-TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGS 194
Query: 221 KTVTHMEIGYNFYQGNIPWQ 240
+ + N PW
Sbjct: 195 HLLPFAFLHGN------PWL 208
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 79.1 bits (195), Expect = 1e-15
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 18/176 (10%)
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKE--LSNLTKLESLFLFRNQLAGQVPWEFSRVT 293
++P S LD++ NLS + E + LT L SL L N L F V
Sbjct: 36 SLP------SYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVP 88
Query: 294 TLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
L+ LDLS N L F+DL+ L +L L N + + + L+ L++ N
Sbjct: 89 NLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQI 148
Query: 354 SGSLPE----NLGRNSKLRWVDVSTNNFNGSIPPDICSG---GVLFKLILFSNNFT 402
S P + + KL +D+S+N +P V L L +N
Sbjct: 149 S-RFPVELIKDGNKLPKLMLLDLSSNKLK-KLPLTDLQKLPAWVKNGLYLHNNPLE 202
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 1e-06
Identities = 29/166 (17%), Positives = 68/166 (40%), Gaps = 16/166 (9%)
Query: 437 PDINYIDLSRNGFTGGIPTDINQA--SKLEYFNVSNNPKLGGMIPAQTWS-LPSLQNFSA 493
+DLS N + + + + L +S+N L I ++ + +P+L+
Sbjct: 39 SYTALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHN-HLN-FISSEAFVPVPNLRYLDL 95
Query: 494 SACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESV-SNCVELERIDLANNKLIGSIP 550
S+ ++ L F +++ V+ + N++ + + + +L+++ L+ N++ P
Sbjct: 96 SSNHLH-TLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQIS-RFP 152
Query: 551 E----VLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFND 592
+LP L +LDLS N L + + ++
Sbjct: 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 1e-05
Identities = 44/207 (21%), Positives = 68/207 (32%), Gaps = 56/207 (27%)
Query: 106 LNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS 164
L+LSHN+ S LT+L SL +S N+ + + NL LD SN
Sbjct: 44 LDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN----- 98
Query: 165 VPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVT 224
L L F ++LE L L N + +
Sbjct: 99 ------HLHTLD-------------EFLFSDLQALEVLLLYNNHI-VVVDRNA------- 131
Query: 225 HMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE----LSNLTKLESLFLFRNQ 280
+M+++Q L ++ +S P E + L KL L L N+
Sbjct: 132 ----------------FEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNK 174
Query: 281 LAGQVPWEFSRVTTLK--SLDLSDNRL 305
L + ++ L L +N L
Sbjct: 175 LKKLPLTDLQKLPAWVKNGLYLHNNPL 201
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 1e-04
Identities = 40/209 (19%), Positives = 67/209 (32%), Gaps = 23/209 (11%)
Query: 101 NELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGI-QSLRNLLVLDAFS 158
L L LSHN + E F + +L LD+S N+ + L+ L VL ++
Sbjct: 64 TNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYN 121
Query: 159 NSFSGSVPAEI-SQLEHLKVLNLAG---SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214
N V + L+ L L+ S F + L L L+ N L
Sbjct: 122 NHIV-VVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPL 180
Query: 215 AELGMLKTVTHMEIGYNFYQGNIPWQ--------LGNMSEVQYLDIAG--ANLSGSIPKE 264
+L L + + N P + + Q + +L K+
Sbjct: 181 TDLQKLPAWVKNGLYLH---NN-PLECDCKLYQLFSHWQYRQLSSVMDFQEDLYCMHSKK 236
Query: 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVT 293
L N+ L+ + + +T
Sbjct: 237 LHNIFSLDFFNCSEYKESAWEAHLGDTLT 265
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 5e-15
Identities = 85/522 (16%), Positives = 153/522 (29%), Gaps = 122/522 (23%)
Query: 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184
+ SLDI S L + L+ +V+ L
Sbjct: 3 LDIQSLDIQCEELS---DARWAEL--------------------LPLLQQCQVVRLDDCG 39
Query: 185 FS----GPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG-MLK----TVTHMEIGYNFYQG 235
+ I S +L L+L N L D + L+ + + +
Sbjct: 40 LTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC---- 95
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRV--- 292
++ ++ L L L+ L L N L
Sbjct: 96 -------CLTGAGCGVLSST---------LRTLPTLQELHLSDNLLGDAGLQLLCEGLLD 139
Query: 293 --TTLKSLDLSDNRLSGPIPESFADL----KNLRLLSLMYNEMSGTVPESLVQL-----P 341
L+ L L LS E A + + + L++ N+++ L Q
Sbjct: 140 PQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPC 199
Query: 342 SLEILFIWNNYFS----GSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGG-----VLF 392
LE L + + + L + + LR + + +N ++C G L
Sbjct: 200 QLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLR 259
Query: 393 KLILFSNNFT----GSLSPSLSNCSSLVRLRLEDNSFSGE-----IPLKFSQLPDINYID 443
L ++ T G L L SL L L N E + +
Sbjct: 260 TLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLW 319
Query: 444 LSRNGFTGGIPTDINQA----SKLEYFNVSNNPKLG--GMIP---AQTWSLPSLQNFSAS 494
+ FT + + L +SNN +L G+ L+ +
Sbjct: 320 VKSCSFTAACCSHFSSVLAQNRFLLELQISNN-RLEDAGVRELCQGLGQPGSVLRVLWLA 378
Query: 495 ACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKL----IGSIP 550
C+++ SC S++ ++ L +DL+NN L I +
Sbjct: 379 DCDVSD-----SSCSSLA--------------ATLLANHSLRELDLSNNCLGDAGILQLV 419
Query: 551 EVLARL-PVLGVLDLSHNSLSGQIPAKFGS----CSSLTVLN 587
E + + +L L L S ++ + + SL V++
Sbjct: 420 ESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVIS 461
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 3e-14
Identities = 66/427 (15%), Positives = 132/427 (30%), Gaps = 82/427 (19%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNL-----TSLISLDISRNNFS----GHFPGGIQSLRNLLV 153
L +LNL N + + L + + G +++L L
Sbjct: 58 LAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQE 117
Query: 154 LDAFSNSFSGSVPAEISQLE-----HLKVLNLAGSYFSGPIPSQFGSF----KSLEFLHL 204
L N + + + L+ L L S S + L +
Sbjct: 118 LHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTV 177
Query: 205 AGNLLNDQIPAELG-MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS----G 259
+ N +N+ L LK + +++ L + ++
Sbjct: 178 SNNDINEAGVRVLCQGLKD--------------------SPCQLEALKLESCGVTSDNCR 217
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRV-----TTLKSLDLSDNRLSGP----IP 310
+ +++ L L L N+L E + L++L + + ++ +
Sbjct: 218 DLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277
Query: 311 ESFADLKNLRLLSLMYNEMSGTVPESLVQL-----PSLEILFIWNNYFSG----SLPENL 361
++L+ LSL NE+ L + LE L++ + F+ L
Sbjct: 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVL 337
Query: 362 GRNSKLRWVDVSTNNFNGSIPPDICSG-----GVLFKLILFSNNFT----GSLSPSLSNC 412
+N L + +S N + ++C G VL L L + + SL+ +L
Sbjct: 338 AQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLAN 397
Query: 413 SSLVRLRLEDNSFSGEIPLKFSQ-LPDINY----IDLSRNGFTGGIPTDINQASKLEYFN 467
SL L L +N L+ + + + L ++ + + K
Sbjct: 398 HSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEK----- 452
Query: 468 VSNNPKL 474
+ P L
Sbjct: 453 --DKPSL 457
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 6e-14
Identities = 63/375 (16%), Positives = 111/375 (29%), Gaps = 68/375 (18%)
Query: 269 TKLESLFLFRNQL-AGQVPWEFSRVTTLKSLDLSDNRLS----GPIPESFADLKNLRLLS 323
++SL + +L + + + + L D L+ I + L L+
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 62
Query: 324 LMYNEMSGTVPESL-----VQLPSLEILFIWNNYFS----GSLPENLGRNSKLRWVDVST 374
L NE+ + ++ L + N + G L L L+ + +S
Sbjct: 63 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSD 122
Query: 375 NNFNGSIPPDICSGG-----VLFKLILFSNNFT----GSLSPSLSNCSSLVRLRLEDNSF 425
N + +C G L KL L + + L+ L L + +N
Sbjct: 123 NLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDI 182
Query: 426 SGE------IPLKFSQLPDINYIDLSRNGFTGGIPTDINQA----SKLEYFNVSNNPKLG 475
+ LK S + + L G T D+ + L + +N KLG
Sbjct: 183 NEAGVRVLCQGLKDSPCQ-LEALKLESCGVTSDNCRDLCGIVASKASLRELALGSN-KLG 240
Query: 476 G-----MIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVS 530
+ P L+ C IT K C + +
Sbjct: 241 DVGMAELCPGLLHPSSRLRTLWIWECGITA-----KGCGDLC--------------RVLR 281
Query: 531 NCVELERIDLANNKL----IGSIPEVLAR-LPVLGVLDLSHNSLSGQ----IPAKFGSCS 581
L+ + LA N+L + E L L L + S + +
Sbjct: 282 AKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNR 341
Query: 582 SLTVLNVSFNDISGS 596
L L +S N + +
Sbjct: 342 FLLELQISNNRLEDA 356
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 1e-13
Identities = 81/452 (17%), Positives = 140/452 (30%), Gaps = 97/452 (21%)
Query: 197 KSLEFLHLAGNLLNDQIPAELG-MLKTVTHMEIGYNFYQGNIPWQ--------LGNMSEV 247
++ L + L+D AEL +L+ + + + L +
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDC----GLTEARCKDISSALRVNPAL 58
Query: 248 QYLDIAGANLSGSIPKEL-----SNLTKLESLFLFRNQL----AGQVPWEFSRVTTLKSL 298
L++ L + + K++ L L L G + + TL+ L
Sbjct: 59 AELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQEL 118
Query: 299 DLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS---- 354
LSDN L L+LL L LE L + S
Sbjct: 119 HLSDNLLGD---------AGLQLLCEG----------LLDPQCRLEKLQLEYCSLSAASC 159
Query: 355 GSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-----GVLFKLILFSNNFT----GSL 405
L L + + VS N+ N + +C G L L L S T L
Sbjct: 160 EPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDL 219
Query: 406 SPSLSNCSSLVRLRLEDNSFSGE-----IPLKFSQLPDINYIDLSRNGFT----GGIPTD 456
+++ +SL L L N P + + + G T G +
Sbjct: 220 CGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRV 279
Query: 457 INQASKLEYFNVSNNPKLG--GMI---PAQTWSLPSLQNFSASACNITGNLPPFKSCKSI 511
+ L+ +++ N +LG G L++ +C+ T C
Sbjct: 280 LRAKESLKELSLAGN-ELGDEGARLLCETLLEPGCQLESLWVKSCSFTA-----ACCSHF 333
Query: 512 SVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARL-----PVLGVLDLSH 566
S ++ L + ++NN+L + L + VL VL L+
Sbjct: 334 S--------------SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLAD 379
Query: 567 NSLSGQ----IPAKFGSCSSLTVLNVSFNDIS 594
+S + A + SL L++S N +
Sbjct: 380 CDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 77.5 bits (190), Expect = 8e-15
Identities = 49/299 (16%), Positives = 98/299 (32%), Gaps = 27/299 (9%)
Query: 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALP---GKPLRIFFNELVDLNLSHNSFSGQF 117
+ W + V +L L+ LP + + + + L + +
Sbjct: 283 LSVEWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPE-CW 341
Query: 118 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177
+ L ++S S ++S + L L+ + ++ + L+ L
Sbjct: 342 CRDSATDEQLFRCELS-VEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLY 400
Query: 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAG-----NLLNDQIPAELGMLKTVTHMEIGYNF 232
YFS + K+++ + A + + V + + +
Sbjct: 401 EKETLQYFS--------TLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKD 452
Query: 233 YQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRV 292
+ L + V +LD++ L ++P L+ L LE L N L V + +
Sbjct: 453 LT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANL 507
Query: 293 TTLKSLDLSDNRLSG-PIPESFADLKNLRLLSLMYNEMSGTVPES---LVQLPSLEILF 347
L+ L L +NRL + L LL+L N + LPS+ +
Sbjct: 508 PRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 71.7 bits (175), Expect = 5e-13
Identities = 59/333 (17%), Positives = 113/333 (33%), Gaps = 22/333 (6%)
Query: 272 ESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 331
+S + + L G+ E V + + LS + L LM +E
Sbjct: 226 QSAWFYHRWLLGR--AEPHDVLCCVHVSREEACLSVCFSRPLTVGSRMGTLLLMVDEAPL 283
Query: 332 TVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN--------GSIPP 383
+V + + + SL + L +++ S +
Sbjct: 284 SVEWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCR 343
Query: 384 DICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYID 443
D + LF+ L S + L L +C L L E+ I L L + Y
Sbjct: 344 DSATDEQLFRCEL-SVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEK 402
Query: 444 LSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLP 503
+ F+ D +A+ L+ + ++ + ++T L
Sbjct: 403 ETLQYFSTLKAVDPMRAAYLDDLRSKFLLE----NSVLKMEYADVRVLHLAHKDLT-VLC 457
Query: 504 PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLD 563
+ ++ ++ N L +P +++ LE + ++N + ++ +A LP L L
Sbjct: 458 HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNA-LENVDG-VANLPRLQELL 514
Query: 564 LSHNSLSGQIPA--KFGSCSSLTVLNVSFNDIS 594
L +N L Q A SC L +LN+ N +
Sbjct: 515 LCNNRLQ-QSAAIQPLVSCPRLVLLNLQGNSLC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 55.5 bits (133), Expect = 6e-08
Identities = 48/304 (15%), Positives = 84/304 (27%), Gaps = 61/304 (20%)
Query: 269 TKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNE 328
L + L ++ + K L +R +S A + L L E
Sbjct: 302 CDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDS-ATDEQLFRCEL-SVE 359
Query: 329 MSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG 388
S + L L+ L N + ++ + L + + F+ D
Sbjct: 360 KSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMR- 418
Query: 389 GVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNG 448
L + F S + + L L + L QL + ++DLS N
Sbjct: 419 --AAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCHL--EQLLLVTHLDLSHNR 474
Query: 449 FTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSC 508
+P + LE S+N + N+ +
Sbjct: 475 LRA-LPPALAALRCLEVLQASDN-------------------------ALE-NVDGVANL 507
Query: 509 KSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEV--LARLPVLGVLDLSH 566
L+ + L NN+ + + L P L +L+L
Sbjct: 508 PR------------------------LQELLLCNNR-LQQSAAIQPLVSCPRLVLLNLQG 542
Query: 567 NSLS 570
NSL
Sbjct: 543 NSLC 546
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 2e-14
Identities = 40/186 (21%), Positives = 72/186 (38%), Gaps = 14/186 (7%)
Query: 409 LSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNV 468
+ ++ L+ S + + ++L I+ I + + I + +
Sbjct: 20 DDAFAETIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIK--SVQGIQYLPNVTKLFL 75
Query: 469 SNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPES 528
+ N KL + P +L +L + +L K K + + N +S I
Sbjct: 76 NGN-KLTDIKPLA--NLKNLGWLFLDENKVK-DLSSLKDLKKLKSLSLEHNGIS-DI-NG 129
Query: 529 VSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNV 588
+ + +LE + L NNK+ + VL+RL L L L N +S I + L L +
Sbjct: 130 LVHLPQLESLYLGNNKI--TDITVLSRLTKLDTLSLEDNQIS-DIVP-LAGLTKLQNLYL 185
Query: 589 SFNDIS 594
S N IS
Sbjct: 186 SKNHIS 191
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 3e-14
Identities = 50/256 (19%), Positives = 92/256 (35%), Gaps = 25/256 (9%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
F E + NL S + L S+ + + ++ G IQ L N+ L N
Sbjct: 23 FAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNGN 78
Query: 160 SFSGSVPAEISQLEHLKVLNLAG---SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE 216
+ P ++ L++L L L S K L+ L L N ++D
Sbjct: 79 KLTDIKP--LANLKNLGWLFLDENKVKDLSS-----LKDLKKLKSLSLEHNGISDING-- 129
Query: 217 LGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFL 276
L L + + +G N + L ++++ L + +S I L+ LTKL++L+L
Sbjct: 130 LVHLPQLESLYLGNN--KITDITVLSRLTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLYL 185
Query: 277 FRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336
+N + + + L L+L ++L + + PE
Sbjct: 186 SKNHI--SDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL--VTPEI 241
Query: 337 LVQLPSLEILFI-WNN 351
+ E + W+
Sbjct: 242 ISDDGDYEKPNVKWHL 257
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 5e-14
Identities = 57/254 (22%), Positives = 104/254 (40%), Gaps = 18/254 (7%)
Query: 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182
I ++ + + + L ++ + A ++ SV I L ++ L L G
Sbjct: 22 AFAETIKDNLKKKSVTD--AVTQNELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNG 77
Query: 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG 242
+ + I + K+L +L L N + D L LK + + + +N +I L
Sbjct: 78 NKLTD-I-KPLANLKNLGWLFLDENKVKDLSS--LKDLKKLKSLSLEHNGIS-DIN-GLV 131
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
++ +++ L + ++ LS LTKL++L L NQ++ VP + +T L++L LS
Sbjct: 132 HLPQLESLYLGNNKITDITV--LSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSK 187
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362
N +S + A LKNL +L L E L + N S PE +
Sbjct: 188 NHISD--LRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTV--KNTDGSLVTPEIIS 243
Query: 363 RNSKLRWVDVSTNN 376
+ +V +
Sbjct: 244 DDGDYEKPNVKWHL 257
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 4e-12
Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 18/209 (8%)
Query: 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSL 324
+ L + + V + + ++ + +++ + + L N+ L L
Sbjct: 20 DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK--SVQGIQYLPNVTKLFL 75
Query: 325 MYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPP- 383
N+++ + L L +L LF+ N L +L KL+ + + N + I
Sbjct: 76 NGNKLTDI--KPLANLKNLGWLFLDENKVK-DL-SSLKDLKKLKSLSLEHNGIS-DINGL 130
Query: 384 DICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYID 443
L L L +N T ++ LS + L L LEDN S +PL + L + +
Sbjct: 131 VHLPQ--LESLYLGNNKIT-DITV-LSRLTKLDTLSLEDNQISDIVPL--AGLTKLQNLY 184
Query: 444 LSRNGFTGGIPTDINQASKLEYFNVSNNP 472
LS+N + + L+ + +
Sbjct: 185 LSKNHISD--LRALAGLKNLDVLELFSQE 211
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 43/259 (16%), Positives = 83/259 (32%), Gaps = 40/259 (15%)
Query: 311 ESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWV 370
S +L ++ V +L S++ + N+ S+ + + + +
Sbjct: 18 FSDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SV-QGIQYLPNVTKL 73
Query: 371 DVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIP 430
++ N I P + + L L L N LS L + L L LE N S
Sbjct: 74 FLNGNKLT-DIKP-LANLKNLGWLFLDENKVK-DLSS-LKDLKKLKSLSLEHNGISDING 129
Query: 431 LKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQN 490
L LP + + L N I + L L L
Sbjct: 130 L--VHLPQLESLYLGNNK--------ITDITVLS-------------------RLTKLDT 160
Query: 491 FSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIP 550
S I+ ++ P + + N++S +++ L+ ++L + + +
Sbjct: 161 LSLEDNQIS-DIVPLAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPI 217
Query: 551 EVLARLPVLGVLDLSHNSL 569
+ L V + + SL
Sbjct: 218 NHQSNLVVPNTVKNTDGSL 236
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 2e-14
Identities = 44/260 (16%), Positives = 84/260 (32%), Gaps = 36/260 (13%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGI-QSLRNLLVLDA 156
++L F L ++IS+N+ + +L L +
Sbjct: 28 LPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIR- 85
Query: 157 FSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE 216
I + +L +N P F + +L++L ++ + +P
Sbjct: 86 ------------IEKANNLLYIN----------PEAFQNLPNLQYLLISNTGIK-HLPDV 122
Query: 217 LGM-LKTVTHMEIGYNFYQGNIPWQL--GNMSEVQYLDIAGANLSGSIPKELSNLTKLES 273
+ ++I N I G E L + + I N T+L+
Sbjct: 123 HKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDE 181
Query: 274 LFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332
L L N ++P + F + LD+S R+ +LK LR S +
Sbjct: 182 LNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK---K 238
Query: 333 VPESLVQLPSLEILFIWNNY 352
+P +L +L +L +
Sbjct: 239 LP-TLEKLVALMEASLTYPS 257
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 4e-14
Identities = 44/280 (15%), Positives = 91/280 (32%), Gaps = 37/280 (13%)
Query: 294 TLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
+ + +++++ IP +N L + ++ + LE + I N
Sbjct: 10 SNRVFLCQESKVTE-IPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 66
Query: 354 SGSLPENLGRN-SKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGSLSPSLSN 411
+ ++ N KL + + N I P+ L L++ + +
Sbjct: 67 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIH 126
Query: 412 CSSLVRLRLEDNSFSGEIPLK-FSQLP-DINYIDLSRNGFTGGIPTDINQASKLEYFNVS 469
V L ++DN I F L + + L++NG I ++L+ N+S
Sbjct: 127 SLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLS 185
Query: 470 NNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESV 529
+N L +P F +++ + ++P
Sbjct: 186 DNNNLE-ELPNDV----------------------FHGASGPVILDISRTRIH-SLPSYG 221
Query: 530 -SNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNS 568
N +L N K + + L +L L L++ S
Sbjct: 222 LENLKKLRARSTYNLKKLPT----LEKLVALMEASLTYPS 257
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 6e-11
Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 17/227 (7%)
Query: 370 VDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSP-SLSNCSSLVRLRLEDNSFSGE 428
+ IP D+ +L + + S L ++ + N
Sbjct: 14 FLCQESKVT-EIPSDLPRN--AIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEV 69
Query: 429 IPLK-FSQLPDINYIDLSRNGFTGGIPTDI-NQASKLEYFNVSNNPKLGGMIPAQT-WSL 485
I FS LP ++ I + + I + L+Y +SN + +P
Sbjct: 70 IEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNT-GIK-HLPDVHKIHS 127
Query: 486 PSLQNFSASACNITGNLPP--FKSCKSISVIES-HMNNLSGTIPESVSNCVELERIDLAN 542
+ F SVI + N + I S N +L+ ++L++
Sbjct: 128 LQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSD 186
Query: 543 NKLIGSIPE-VLARLPVLGVLDLSHNSLSGQIPAK-FGSCSSLTVLN 587
N + +P V +LD+S + +P+ + L +
Sbjct: 187 NNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARS 232
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 62.2 bits (151), Expect = 2e-10
Identities = 42/266 (15%), Positives = 79/266 (29%), Gaps = 36/266 (13%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE-LGMLKT 222
+P+++ + + L + F F LE + ++ N + + I A+ L
Sbjct: 23 EIPSDLPR--NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80
Query: 223 VTHMEIGYNFYQGNIPWQ-LGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQ 280
+ + I I + N+ +QYL I+ + +P + + L + N
Sbjct: 81 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNI 139
Query: 281 LAGQVPWE-FSRVTT-LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338
+ F ++ L L+ N + +F + L N + +
Sbjct: 140 NIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFH 199
Query: 339 QLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFS 398
IL I S+P L KL S
Sbjct: 200 GASGPVILDISRTRIH-------------------------SLPSYGLEN--LKKLRARS 232
Query: 399 NNFTGSLSPSLSNCSSLVRLRLEDNS 424
L P+L +L+ L S
Sbjct: 233 TYNLKKL-PTLEKLVALMEASLTYPS 257
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 71.3 bits (174), Expect = 3e-13
Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKN 318
L L L++ Q + + L++L + + L P++F
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81
Query: 319 LRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
L L+L +N + ++ VQ SL+ L + N
Sbjct: 82 LSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 57.1 bits (137), Expect = 1e-08
Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 6/119 (5%)
Query: 503 PPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIP-EVLARLPVLGV 561
P S + + + L + + N + + + L L L
Sbjct: 2 PDACCPHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRN 60
Query: 562 LDLSHNSLSGQIPAK-FGSCSSLTVLNVSFNDISGSIPSGKVLRL-MGSSAYAGNPKLC 618
L + + L + F L+ LN+SFN + S+ V L + +GNP C
Sbjct: 61 LTIVKSGLR-FVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLHC 117
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 53.6 bits (128), Expect = 1e-07
Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 4/102 (3%)
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVP-ESLVQLPSLEILFIWNNYFSGSLPENL 361
+ +NL L + + + L L L L I + + +
Sbjct: 17 RDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDA 75
Query: 362 GRN-SKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402
+L +++S N S+ G L +L+L N
Sbjct: 76 FHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 4e-05
Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 4/101 (3%)
Query: 374 TNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSP-SLSNCSSLVRLRLEDNSFSGEIPLK 432
T + + L +L + + L L L L + + +
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPD 74
Query: 433 -FSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNP 472
F P ++ ++LS N + Q L+ +S NP
Sbjct: 75 AFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNP 114
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 9e-05
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 213 IPAELGMLKTVTHMEIGYNFYQGNIPWQ-LGNMSEVQYLDIAGANLSGSIPKE-LSNLTK 270
L + +T + I + ++ + L + E++ L I + L + + +
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPR 81
Query: 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL 305
L L L N L + W+ + +L+ L LS N L
Sbjct: 82 LSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 3e-13
Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 11/188 (5%)
Query: 243 NMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDL 300
N+ + + ++ + NL+K+ + + + + + + LK L +
Sbjct: 53 NLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGI 112
Query: 301 SDNRLSG-PIPESFADLKNLRLLSLMYNEMSGTVPE-SLVQLPS-LEILFIWNNYFSGSL 357
+ L P +L + N ++P + L + L ++NN F+ S+
Sbjct: 113 FNTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SV 171
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSG--GVLFKLILFSNNFTGSLSPSLSNCSSL 415
+KL V ++ N + I D G L + + T +L L
Sbjct: 172 QGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKG--LEHL 228
Query: 416 VRLRLEDN 423
L +
Sbjct: 229 KELIARNT 236
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 3e-12
Identities = 47/204 (23%), Positives = 75/204 (36%), Gaps = 17/204 (8%)
Query: 407 PSLSNCSSLVRLRLEDNSFSGEIPLK-FSQLPDINYIDLSRNGFTGGIPTDI-NQASKLE 464
PSL S L+L + IP FS LP+I+ I +S + + + SK+
Sbjct: 27 PSLP--PSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVT 83
Query: 465 YFNVSNNPKLGGMIPAQT-WSLPSLQNFSASACNITGNLPP---FKSCKSISVIESHMNN 520
+ + N L I LP L+ + P S ++E N
Sbjct: 84 HIEIRNTRNLT-YIDPDALKELPLLKFLGIFNTGLK-MFPDLTKVYSTDIFFILEITDNP 141
Query: 521 LSGTIPESV--SNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAK-F 577
+IP + C E + L NN S+ L + L+ N I F
Sbjct: 142 YMTSIPVNAFQGLCNETLTLKLYNNG-FTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAF 200
Query: 578 -GSCSSLTVLNVSFNDISGSIPSG 600
G S ++L+VS ++ ++PS
Sbjct: 201 GGVYSGPSLLDVSQTSVT-ALPSK 223
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 7e-12
Identities = 38/251 (15%), Positives = 80/251 (31%), Gaps = 36/251 (14%)
Query: 80 INLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFS 138
++ K + +P P L L P F NL ++ + +S +
Sbjct: 16 FRVTCKDIQ-RIPSLP-----PSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTL 68
Query: 139 GHFPGGI-QSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSYFSG-PIPSQFGS 195
+L + ++ + + + +L LK L + + P ++ S
Sbjct: 69 QQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKVYS 128
Query: 196 FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGA 255
L + N IP + + +E L +
Sbjct: 129 TDIFFILEITDNPYMTSIPV--NAFQGLC--------------------NETLTLKLYNN 166
Query: 256 NLSGSIPKELSNLTKLESLFLFRNQLAGQVPWE-FSRVTT-LKSLDLSDNRLSGPIPESF 313
+ S+ N TKL++++L +N+ + + F V + LD+S ++ +
Sbjct: 167 GFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGL 225
Query: 314 ADLKNLRLLSL 324
LK L +
Sbjct: 226 EHLKELIARNT 236
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 39/230 (16%), Positives = 82/230 (35%), Gaps = 22/230 (9%)
Query: 370 VDVSTNNFNG--SIPPDICSGGVLFKLILFSNNFTGSLSP-SLSNCSSLVRLRLEDNSFS 426
V+ + S+PP L L + ++ + SN ++ R+ + +
Sbjct: 16 FRVTCKDIQRIPSLPPS------TQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTL 68
Query: 427 GEIPLK-FSQLPDINYIDLSRNGFTGGIPTDI-NQASKLEYFNVSNNPKLGGMIPAQTW- 483
++ F L + +I++ I D + L++ + N L M P T
Sbjct: 69 QQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNT-GLK-MFPDLTKV 126
Query: 484 -SLPSLQNFSASACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDL 540
S + ++P F+ + ++ NN ++ N +L+ + L
Sbjct: 127 YSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYL 186
Query: 541 ANNKLIGSIPE-VLARLP-VLGVLDLSHNSLSGQIPAK-FGSCSSLTVLN 587
NK + I + + +LD+S S++ +P+K L N
Sbjct: 187 NKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKGLEHLKELIARN 235
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 32/188 (17%), Positives = 67/188 (35%), Gaps = 12/188 (6%)
Query: 293 TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNY 352
+ ++ + IP + + L L+ + + LP++ +++ +
Sbjct: 11 HQEEDFRVTCKDIQR-IPSL---PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDV 66
Query: 353 FSGSLPENLGRN-SKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGSLSP--S 408
L + N SK+ +++ I PD +L L +F+
Sbjct: 67 TLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPDLTK 125
Query: 409 LSNCSSLVRLRLEDNSFSGEIPLK-FSQLP-DINYIDLSRNGFTGGIPTDINQASKLEYF 466
+ + L + DN + IP+ F L + + L NGFT + +KL+
Sbjct: 126 VYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAV 184
Query: 467 NVSNNPKL 474
++ N L
Sbjct: 185 YLNKNKYL 192
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 2e-12
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 12/191 (6%)
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295
NIP ++ + LD+ LS K LTKL L+L N+L F + L
Sbjct: 34 NIP------ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNL 87
Query: 296 KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL-VQLPSLEILFIWNNYFS 354
++L ++DN+L F L NL L L N++ ++P + L L L + N
Sbjct: 88 ETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQ 146
Query: 355 GSLPENLGRN-SKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGSLSPSLSNC 412
SLP+ + + L+ + + N +P L L L +N + +
Sbjct: 147 -SLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSL 204
Query: 413 SSLVRLRLEDN 423
L L+L++N
Sbjct: 205 EKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 56/259 (21%), Positives = 85/259 (32%), Gaps = 62/259 (23%)
Query: 118 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177
P I LD+ N S L L +L N ++PA I
Sbjct: 32 PSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGI-------- 80
Query: 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI 237
F K+LE L + N L +P +
Sbjct: 81 ---------------FKELKNLETLWVTDNKLQA-LPI--------------------GV 104
Query: 238 PWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPWEFSRVTTLK 296
QL N+ L + L S+P + +LTKL L L N+L F ++T+LK
Sbjct: 105 FDQLVNL---AELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLK 160
Query: 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNN----- 351
L L +N+L +F L L+ L L N++ + L L++L + N
Sbjct: 161 ELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220
Query: 352 -----YFSGSLPENLGRNS 365
Y + L +
Sbjct: 221 CNGIIYMAKWLKKKADEGL 239
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 52/233 (22%), Positives = 86/233 (36%), Gaps = 37/233 (15%)
Query: 364 NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPS-LSNCSSLVRLRLED 422
N+ VD S+ +IP +I + KL L SN + SL + L L L D
Sbjct: 15 NNNKNSVDCSSKKLT-AIPSNIPAD--TKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLND 70
Query: 423 NSFSGEIPLK-FSQLPDINYIDLSRNGFTGGIPTDI-NQASKLEYFNVSNNPKLGGMIPA 480
N +P F +L ++ + ++ N +P + +Q L + N
Sbjct: 71 NKLQ-TLPAGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQ-------- 120
Query: 481 QTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESV-SNCVELERID 539
L++ F S ++ + N L ++P+ V L+ +
Sbjct: 121 -------LKSLPPRV---------FDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELR 163
Query: 540 LANNKLIGSIPE-VLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFN 591
L NN+L +PE +L L L L +N L F S L +L + N
Sbjct: 164 LYNNQL-KRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 3e-05
Identities = 41/192 (21%), Positives = 75/192 (39%), Gaps = 33/192 (17%)
Query: 413 SSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDI-NQASKLEYFNVSNN 471
+ +L L+ N S F +L + + L+ N +P I + LE V++N
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDN 95
Query: 472 PKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESV-S 530
+ +LP + F +++ + N L ++P V
Sbjct: 96 ---------KLQALPI---------GV------FDQLVNLAELRLDRNQLK-SLPPRVFD 130
Query: 531 NCVELERIDLANNKLIGSIPE-VLARLPVLGVLDLSHNSLSGQIPAK-FGSCSSLTVLNV 588
+ +L + L N+L S+P+ V +L L L L +N L ++P F + L L +
Sbjct: 131 SLTKLTYLSLGYNEL-QSLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKL 188
Query: 589 SFNDISGSIPSG 600
N + +P G
Sbjct: 189 DNNQLK-RVPEG 199
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 4e-12
Identities = 57/271 (21%), Positives = 90/271 (33%), Gaps = 72/271 (26%)
Query: 716 ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
V+VK + ++F+ RI H N++RL+G C + Y++ + + G+
Sbjct: 140 TLVAVKSCRETLPP-DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 198
Query: 773 LSEKIRTKRD---WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
+RT+ ++V A G+ +L C I H DL A N + E ++
Sbjct: 199 FLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC--I-HRDLAARNCLVTEKNVLKIS 255
Query: 830 EFG-------FKYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMYM---DVYGFGEIIL- 876
+FG Y P K WT E A+ Y DV+ FG I+L
Sbjct: 256 DFGMSREEADGVYAASGGLRQVPVK--WTAPE------ALNYGRYSSESDVWSFG-ILLW 306
Query: 877 EILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL------------- 923
E + G P L S Q + V
Sbjct: 307 ETFSLGA----------SPYPNL--------------SNQQTREFVEKGGRLPCPELCPD 342
Query: 924 ---DVALLCTRSTPSDRPSMEEALKLLSGLK 951
+ C P RPS + L ++
Sbjct: 343 AVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 6e-12
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 18/189 (9%)
Query: 715 GITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773
+TV+VK ++ + + E + ++H NL++LLG C Y++ +++ GNL
Sbjct: 245 SLTVAVKTLKEDTMEVEEFLKEAAV-MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303
Query: 774 SEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
+ +R + ++ + +L + I H +L A N + EN +A
Sbjct: 304 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF--I-HRNLAARNCLVGENHLVKVA 360
Query: 830 EFGF------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGR 883
+FG T A FP K WT + E K + DV+ FG ++ EI T G
Sbjct: 361 DFGLSRLMTGDTYTAHAGAKFPIK--WT-APESLAYNKFSIKSDVWAFGVLLWEIATYGM 417
Query: 884 LTNAGSSLQ 892
G L
Sbjct: 418 SPYPGIDLS 426
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 2e-11
Identities = 57/273 (20%), Positives = 110/273 (40%), Gaps = 57/273 (20%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCY--NRHQAYLLYDYL 768
TG V+VK ++ + +++ I + H+N+++ G C + L+ ++L
Sbjct: 49 TGEQVAVKSLKPESGG-NHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 769 PNGNLSEKIRTKR---------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 819
P+G+L E + + +A + +G+ +L Y + H DL A N++
Sbjct: 108 PSGSLKEYLPKNKNKINLKQQLKYAV------QICKGMDYLGSRQY--V-HRDLAARNVL 158
Query: 820 FDENMEPHLAEFGF--------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYM 866
+ + + +FG +Y T D P + W E +FY A
Sbjct: 159 VESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSP--VFWYAPECLMQSKFYIAS------ 210
Query: 867 DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL----- 921
DV+ FG + E+LT ++ +L K I G+M + ++L++ +L
Sbjct: 211 DVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVT-RL--VNTLKEGKRLPCPPN 267
Query: 922 ----VLDVALLCTRSTPSDRPSMEEALKLLSGL 950
V + C PS+R S + ++ L
Sbjct: 268 CPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 3e-11
Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295
N+P + + + + P S KL + L NQ++ P F + +L
Sbjct: 29 NLP------ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82
Query: 296 KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355
SL L N+++ F L +L+LL L N+++ ++ L +L +L +++N
Sbjct: 83 NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT 142
Query: 356 SLPENLGRNSKLRWVDVSTNNFN 378
++ + ++ N F
Sbjct: 143 IAKGTFSPLRAIQTMHLAQNPFI 165
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 4e-10
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
IP L + L +N + P FS L+ +DLS+N++S P++F L++L
Sbjct: 25 EIPTNLPETI--TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNFN 378
L L N+++ L SL++L + N + L + ++ L + + N
Sbjct: 83 NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQ 141
Query: 379 GSIPPDICSG-GVLFKLILFSNNF 401
+I S + + L N F
Sbjct: 142 -TIAKGTFSPLRAIQTMHLAQNPF 164
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 5e-09
Identities = 34/189 (17%), Positives = 67/189 (35%), Gaps = 52/189 (27%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
+P + E + + L + P F +K L + L+ N ++
Sbjct: 25 EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS------------- 69
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG 283
+ A L L SL L+ N++
Sbjct: 70 ------------ELA--------------PDA---------FQGLRSLNSLVLYGNKIT- 93
Query: 284 QVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342
++P F + +L+ L L+ N+++ ++F DL NL LLSL N++ + L +
Sbjct: 94 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 153
Query: 343 LEILFIWNN 351
++ + + N
Sbjct: 154 IQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 6e-06
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 517 HMNNLSGTIPESV-SNCVELERIDLANNKLIGSIPE-VLARLPVLGVLDLSHNSLSGQIP 574
N + IP S +L RIDL+NN++ + L L L L N ++ ++P
Sbjct: 40 EQNTIK-VIPPGAFSPYKKLRRIDLSNNQI-SELAPDAFQGLRSLNSLVLYGNKIT-ELP 96
Query: 575 AK-FGSCSSLTVLNVSFNDISGSIPSG 600
F SL +L ++ N I+ +
Sbjct: 97 KSLFEGLFSLQLLLLNANKIN-CLRVD 122
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 4e-11
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 27/189 (14%)
Query: 708 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC-YNRHQAYLLYD 766
G V+VK I+ AT ++E + +RH NL++LLG + Y++ +
Sbjct: 210 MLGDY-RGNKVAVKCIKNDATAQAFLAEASV-MTQLRHSNLVQLLGVIVEEKGGLYIVTE 267
Query: 767 YLPNGNLSEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
Y+ G+L + +R++ L V + +L + + + H DL A N++ E
Sbjct: 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF--V-HRDLAARNVLVSE 324
Query: 823 NMEPHLAEFGF--KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMYM---DVYGFGEII 875
+ +++FG + + G P K WT E A++E+ + DV+ FG I+
Sbjct: 325 DNVAKVSDFGLTKEASSTQDTGKLPVK--WTAPE------ALREKKFSTKSDVWSFG-IL 375
Query: 876 L-EILTNGR 883
L EI + GR
Sbjct: 376 LWEIYSFGR 384
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 5e-11
Identities = 54/339 (15%), Positives = 100/339 (29%), Gaps = 94/339 (27%)
Query: 294 TLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
+++ L + ++ D K++ L++ S++ + + N
Sbjct: 5 SIEGKSLKLDAITT------EDEKSV--------------FAVLLEDDSVKEIVLSGNTI 44
Query: 354 SG----SLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSL 409
L EN+ L + S + F G + +I L +L
Sbjct: 45 GTEAARWLSENIASKKDLEIAEFS-DIFTGRVKDEIPEAL-------------RLLLQAL 90
Query: 410 SNCSSLVRLRLEDNSFSGEIPLKFSQLPDIN----YIDLSRNGFT-------------GG 452
C L +RL DN+F + ++ L NG
Sbjct: 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELA 150
Query: 453 IPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASA-CNITGNLPPFKSCKSI 511
+ A L N L+N S F+S + +
Sbjct: 151 VNKKAKNAPPLRSIICGRN---------------RLENGSMKEWAKT------FQSHRLL 189
Query: 512 SVIESHMNNL-----SGTIPESVSNCVELERIDLANNKLIG-----SIPEVLARLPVLGV 561
++ N + + E ++ C EL+ +DL +N ++ L P L
Sbjct: 190 HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNT-FTHLGSSALAIALKSWPNLRE 248
Query: 562 LDLSHNSLSGQ-IPA-----KFGSCSSLTVLNVSFNDIS 594
L L+ LS + A L L + +N+I
Sbjct: 249 LGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE 287
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 4e-10
Identities = 63/361 (17%), Positives = 116/361 (32%), Gaps = 87/361 (24%)
Query: 103 LVDLNLSHNSFSGQFPVEIF----NLTSLISLDISRNNFSGHFPGGIQSL-------RNL 151
+ +L ++ + + +F S+ + +S N + L ++L
Sbjct: 6 IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIG---TEAARWLSENIASKKDL 62
Query: 152 LVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND 211
+ + FS+ F+G V EI E L++L A L + L+ N
Sbjct: 63 EIAE-FSDIFTGRVKDEI--PEALRLLLQA-----------LLKCPKLHTVRLSDNAFGP 108
Query: 212 Q----IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSN 267
+ L + H+ + N LG + IA A ++ K+ N
Sbjct: 109 TAQEPLIDFLSKHTPLEHLYLHNN--------GLGPQA-GAK--IARALQELAVNKKAKN 157
Query: 268 LTKLESLFLFRNQL--AGQVPW--EFSRVTTLKSLDLSDNRL-----SGPIPESFADLKN 318
L S+ RN+L W F L ++ + N + + E A +
Sbjct: 158 APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQE 217
Query: 319 LRLLSLMYNEMS--GTVP--ESLVQLPSLEILFIWNN--------YFSGSLPENLGRNSK 366
L++L L N + G+ +L P+L L + + + + N
Sbjct: 218 LKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSK--LENIG 275
Query: 367 LRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSL-SNCSSLVRLRLEDNSF 425
L+ + + N I V +L + L+ L L N F
Sbjct: 276 LQTLRLQYNE--------IELDAVR------------TLKTVIDEKMPDLLFLELNGNRF 315
Query: 426 S 426
S
Sbjct: 316 S 316
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 1e-07
Identities = 43/368 (11%), Positives = 103/368 (27%), Gaps = 84/368 (22%)
Query: 265 LSNLTKLESLFLFRNQL----AGQVPWEFSRVTTLKSLDLSDNRLSGP----IPESFADL 316
++ + +E L + + V ++K + LS N + + E+ A
Sbjct: 1 MARFS-IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASK 59
Query: 317 KNLRLLSLMYNEMSGTVPE----------SLVQLPSLEILFIWNNYFSG----SLPENLG 362
K+L + E +L++ P L + + +N F L + L
Sbjct: 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLS 119
Query: 363 RNSKLRWVDVSTNNF-------------NGSIPPDICSGGVLFKLILFSNNFTG----SL 405
+++ L + + N ++ + L +I N
Sbjct: 120 KHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEW 179
Query: 406 SPSLSNCSSLVRLRLEDNSFSGE-----IPLKFSQLPDINYIDLSRNGFTG----GIPTD 456
+ + + L +++ N E + + ++ +DL N FT +
Sbjct: 180 AKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239
Query: 457 INQASKLEYFNVSNNP-------KLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCK 509
+ L +++ + LQ I + +
Sbjct: 240 LKSWPNLRELGLNDCLLSARGAAAVVDAF--SKLENIGLQTLRLQYNEIEL-----DAVR 292
Query: 510 SISVIESHMNNLSGTIPESV-SNCVELERIDLANNKL------IGSIPEVLARLPVLGVL 562
++ + +L ++L N+ + I EV + +
Sbjct: 293 TLK--------------TVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGELD 338
Query: 563 DLSHNSLS 570
+L
Sbjct: 339 ELDDMEEL 346
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 7e-05
Identities = 47/303 (15%), Positives = 79/303 (26%), Gaps = 71/303 (23%)
Query: 70 CNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNL----T 125
+ I +++ L AL P +L + LS N+F + + T
Sbjct: 69 DIFTGRVKDEIPEALRLLLQALLKCP------KLHTVRLSDNAFGPTAQEPLIDFLSKHT 122
Query: 126 SLISLDISRNNFSGHFPGGIQSL----------------RNLLVLDAFSNSF-SGSVPA- 167
L L + N P + L + N +GS+
Sbjct: 123 PLEHLYLHNNGLG---PQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEW 179
Query: 168 --EISQLEHLKVLNLAGSYF-----SGPIPSQFGSFKSLEFLHLAGNLLNDQ----IPAE 216
L + + + + + L+ L L N +
Sbjct: 180 AKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239
Query: 217 LGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFL 276
L + + + L GA +L N L++L L
Sbjct: 240 LKSWPNLRELGLNDC--------LLSA---------RGAAAVVDAFSKLEN-IGLQTLRL 281
Query: 277 FRNQLAGQVPWEFSRV-----TTLKSLDLSDNRLS------GPIPESFADLKNLRLLSLM 325
N++ V L L+L+ NR S I E F+ L L
Sbjct: 282 QYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGELDELD 341
Query: 326 YNE 328
E
Sbjct: 342 DME 344
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 65.6 bits (159), Expect = 7e-11
Identities = 88/610 (14%), Positives = 167/610 (27%), Gaps = 166/610 (27%)
Query: 382 PPDICSGGVLFKLILFSNN------FTGSLSPSLSNCSSLV-RLRLEDNSFSGEIPLKFS 434
+ LF +L L N L+ ++ E S
Sbjct: 58 KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRI---NYKFLMSPIKTEQRQPS-------- 106
Query: 435 QLPDINYIDLSRNGFTGG---IPTDINQASKLEY-----FNVSNNPKLG--GMIPAQTWS 484
+ YI+ + ++++ + + G++ +
Sbjct: 107 -MMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW 165
Query: 485 LPSLQNFSASACN---ITGNLP------PFKSCKSISVIESHMNNLSGTI-PESVSNCVE 534
+ + C + + K+C S + + L I P S
Sbjct: 166 V------ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219
Query: 535 LERIDLANNKLIGSIPEVLARLP---VLGVLDLSHNSLSGQIPAKFG-SC---------- 580
I L + + + +L P L VL N + + F SC
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVLL---NVQNAKAWNAFNLSCKILLTTRFKQ 276
Query: 581 -----SSLTVLNVSFNDISGSIPSGKVLRLMGSSAYAGNP--KLCGAPLQPCHASVAILG 633
S+ T ++S + S ++ +V L+ Y L P + +
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLL--LKYLDCRPQDL---PREVLTTN----- 326
Query: 634 KGTGKLKFVLLLCAGIVMFIAAALLGIFFFRRGGKGHWKMISFLGLPQFTANDVLRSFNS 693
+ I A + R G W + + T ++ S S
Sbjct: 327 ---------PRRLSII-----AESI------RDGLATWDNWKHVNCDKLT--TIIES--S 362
Query: 694 TECEEAARPQSAAGCKAVLP--TGITVSVKKIEWGATR----IKIVSEFITRIGTVRHKN 747
E A + +V P I + + W + +V++
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY-------- 414
Query: 748 LIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPA 807
L+ + +P+ L K++ + ++A IV F D P
Sbjct: 415 --SLV----EKQPKESTI-SIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP- 466
Query: 808 IPHGDLKASNIVFD------ENMEPH--LAEFGFKYLTQLADGSF-PAKI-----AWTES 853
P+ D + +N+E + F +L D F KI AW S
Sbjct: 467 -PYLD----QYFYSHIGHHLKNIEHPERMTLFRMVFL----DFRFLEQKIRHDSTAWNAS 517
Query: 854 GEFYNAMKE-EMYMDVY------GFGEIILEILTNGRLTNAGSSLQNKPIDGLL------ 900
G N +++ + Y Y + ++ IL L +L LL
Sbjct: 518 GSILNTLQQLKFYKP-YICDNDPKYERLVNAILDF--LPKIEENLICSKYTDLLRIALMA 574
Query: 901 --GEMYNENE 908
++ E
Sbjct: 575 EDEAIFEEAH 584
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 3e-06
Identities = 91/635 (14%), Positives = 185/635 (29%), Gaps = 195/635 (30%)
Query: 13 IWLVFVPAVSAN-DPY--SEALLS-LKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGV 68
I VF A N D + S L E +D + + W
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHI------IMSK--DAVSGTLRLFW--T 70
Query: 69 KCNKNNTIV---VG--INLSMKGLSGAL------PGKPLRIFFNELVDLNLSHNSFSGQF 117
+K +V V + ++ K L + P R++ + L + F+ ++
Sbjct: 71 LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA-KY 129
Query: 118 PV----EIFNL-TSLISLDISRNNFSGHFPGG-------IQSLRNLLVLDAFSN-----S 160
V L +L+ L N G + + V +
Sbjct: 130 NVSRLQPYLKLRQALLELR-PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN 188
Query: 161 FSGSVPAEISQLEHLKVL--NLAGSYFSGP-----IPSQFGSFKSLEFLHLAGNLLNDQI 213
+ + + LE L+ L + ++ S I + S ++ E L L +
Sbjct: 189 L-KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA-ELRRL---LKSKPY 243
Query: 214 PAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYL----DIAGAN-LSGSIPKELS-- 266
L +L V + + W N+S + L + LS + +S
Sbjct: 244 ENCLLVLLNVQNAKA----------WNAFNLS-CKILLTTRFKQVTDFLSAATTTHISLD 292
Query: 267 ----NLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG-P-----IPESFADL 316
LT E L + + DL L+ P I ES D
Sbjct: 293 HHSMTLTPDEVKSL------------LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG 340
Query: 317 KNL--RLLSLMYNEMSGTVPESLVQLPSLEI------LFIWNNYFSGSLPENLGRNSKLR 368
+ ++++ + SL L E L + P +
Sbjct: 341 LATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV--------FPPS-------- 384
Query: 369 WVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNC--SSLVRLRLEDNSFS 426
IP +L +++ + + ++ SLV + ++++ S
Sbjct: 385 -AH---------IPTI-----LL--SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS 427
Query: 427 GEIPLKFSQLPDINYIDLSRNGFTGGIPTD-------INQASKLEYFNVSNNPK------ 473
+P I Y++L + + ++ + + F+ +
Sbjct: 428 ---------IPSI-YLELKVK-----LENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY 472
Query: 474 --------LGGMIPAQTWSL-PSL-QNF---------SASACNITGNLPP-------FKS 507
L + + +L + +F ++A N +G++ +K
Sbjct: 473 FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKP 532
Query: 508 --CKSISVIESHMNNLSGTIPESVSNCVELERIDL 540
C + E +N + +P+ N + + DL
Sbjct: 533 YICDNDPKYERLVNAILDFLPKIEENLICSKYTDL 567
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 8e-11
Identities = 36/202 (17%), Positives = 76/202 (37%), Gaps = 17/202 (8%)
Query: 393 KLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGG 452
+ I + P ++ V+ L S + + +L + + +
Sbjct: 1 ESIQRPTPIN-QVFP-DPGLANAVKQNLGKQSVTDLVSQ--KELSGVQNFNGDNSNIQ-- 54
Query: 453 IPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSIS 512
+ + L+ ++S+N ++ + P + L L+ S + + NL S +S
Sbjct: 55 SLAGMQFFTNLKELHLSHN-QISDLSPLK--DLTKLEELSVNRNRLK-NLNGIPSAC-LS 109
Query: 513 VIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQ 572
+ N L T +S+ + LE + + NNK + SI +L L L VLDL N ++
Sbjct: 110 RLFLDNNELRDT--DSLIHLKNLEILSIRNNK-LKSI-VMLGFLSKLEVLDLHGNEITNT 165
Query: 573 IPAKFGSCSSLTVLNVSFNDIS 594
+ ++++
Sbjct: 166 GG--LTRLKKVNWIDLTGQKCV 185
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 5e-10
Identities = 48/315 (15%), Positives = 100/315 (31%), Gaps = 74/315 (23%)
Query: 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182
L + + ++ + + + + L + + ++ I L ++
Sbjct: 17 GLANAVKQNLGKQSVTD--LVSQKELSGVQNFNGDNS--------NIQSLAGMQ------ 60
Query: 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG 242
F +L+ LHL+ N ++D P L
Sbjct: 61 ------------FFTNLKELHLSHNQISDLSP--------------------------LK 82
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNL--TKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
++++++ L + L L+ + L LFL N+L + L+ L +
Sbjct: 83 DLTKLEELSVNRNRLK-----NLNGIPSACLSRLFLDNNELRDTDS--LIHLKNLEILSI 135
Query: 301 SDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN 360
+N+L L L +L L NE+ T L +L + + + E
Sbjct: 136 RNNKLKS--IVMLGFLSKLEVLDLHGNEI--TNTGGLTRLKKVNWIDLTGQKCV---NEP 188
Query: 361 LGRNSKLRWVDVSTNNFNGSIPP-DICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419
+ +L + + I P I +GG + + S S + +
Sbjct: 189 VKYQPELYITNTVKDPDGRWISPYYISNGGSYVDGCVLWELPVYTDEVSYKF-SEYINVG 247
Query: 420 LEDNSFSGEI--PLK 432
+ F G + P+K
Sbjct: 248 ETEAIFDGTVTQPIK 262
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 8e-10
Identities = 43/213 (20%), Positives = 76/213 (35%), Gaps = 15/213 (7%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
V NL S + + L+ + + + +N G+Q NL L N
Sbjct: 18 LANAVKQNLGKQSVTDLVSQK--ELSGVQNFNGDNSNIQS--LAGMQFFTNLKELHLSHN 73
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
S P + L L+ L++ + L L L N L D L
Sbjct: 74 QISDLSP--LKDLTKLEELSVNRNRLKNL---NGIPSACLSRLFLDNNELRD--TDSLIH 126
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
LK + + I N + +I LG +S+++ LD+ G ++ + L+ L K+ + L
Sbjct: 127 LKNLEILSIRNNKLK-SIV-MLGFLSKLEVLDLHGNEIT-NT-GGLTRLKKVNWIDLTGQ 182
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPES 312
+ + + ++ D R P S
Sbjct: 183 KCVNEPVKYQPELYITNTVKDPDGRWISPYYIS 215
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 48/221 (21%), Positives = 78/221 (35%), Gaps = 17/221 (7%)
Query: 204 LAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263
+N P L +G + +S VQ + +N+ S+
Sbjct: 4 QRPTPINQVFP--DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQ-SL-A 57
Query: 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323
+ T L+ L L NQ++ P +T L+ L ++ NRL + L L
Sbjct: 58 GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNL---NGIPSACLSRLF 112
Query: 324 LMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPP 383
L NE+ T +SL+ L +LEIL I NN S+ LG SKL +D+ N +
Sbjct: 113 LDNNELRDT--DSLIHLKNLEILSIRNNKLK-SI-VMLGFLSKLEVLDLHGNEIT-NTGG 167
Query: 384 DICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNS 424
+ + + L ++ D
Sbjct: 168 -LTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGR 207
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 23/206 (11%)
Query: 393 KLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGG 452
++N SL+ + ++L L L N S PL L + + ++RN
Sbjct: 45 NFNGDNSNIQ-SLAG-MQFFTNLKELHLSHNQISDLSPL--KDLTKLEELSVNRNRLK-- 98
Query: 453 IPTDIN--QASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKS 510
++N ++ L + NN +L L +L+ S + ++
Sbjct: 99 ---NLNGIPSACLSRLFLDNN-ELRDTDSLI--HLKNLEILSIRNNKLK-SIVMLGFLSK 151
Query: 511 ISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLS 570
+ V++ H N ++ ++ ++ IDL K + E + P L + + +
Sbjct: 152 LEVLDLHGNEITN--TGGLTRLKKVNWIDLTGQKC---VNEPVKYQPELYITNTVKD-PD 205
Query: 571 GQI--PAKFGSCSSLTVLNVSFNDIS 594
G+ P + S V +
Sbjct: 206 GRWISPYYISNGGSYVDGCVLWELPV 231
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 9e-11
Identities = 44/117 (37%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295
IP +V L + G + +PKELSN L + L N+++ FS +T L
Sbjct: 28 GIP------RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL 80
Query: 296 KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV-QLPSLEILFIWNN 351
+L LS NRL P +F LK+LRLLSL N++S VPE L +L L I N
Sbjct: 81 LTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 6e-05
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 517 HMNNLSGTIPESVSNCVELERIDLANNKLIGSIPE-VLARLPVLGVLDLSHNSLSGQIPA 575
N + +P+ +SN L IDL+NN+ I ++ + + L L LS+N L IP
Sbjct: 39 DGNQFT-LVPKELSNYKHLTLIDLSNNR-ISTLSNQSFSNMTQLLTLILSYNRLR-CIPP 95
Query: 576 K-FGSCSSLTVLNVSFNDISGSIPSG 600
+ F SL +L++ NDIS +P G
Sbjct: 96 RTFDGLKSLRLLSLHGNDIS-VVPEG 120
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 1e-10
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 708 CKAVLPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766
V++K ++ G + E + +RH+ L++L + Y++ +
Sbjct: 201 WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV-MKKLRHEKLVQLYAVV-SEEPIYIVTE 258
Query: 767 YLPNGNLSEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
Y+ G+L + ++ + + + +A G+ ++ Y + H DL+A+NI+ E
Sbjct: 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY--V-HRDLRAANILVGE 315
Query: 823 NMEPHLAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEII 875
N+ +A+FG +Y T FP K WT + E + + DV+ FG ++
Sbjct: 316 NLVCKVADFGLARLIEDNEY-TARQGAKFPIK--WT-APEAALYGRFTIKSDVWSFGILL 371
Query: 876 LEILTNGRLTNAGSSLQ 892
E+ T GR+ G +
Sbjct: 372 TELTTKGRVPYPGMVNR 388
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 2e-10
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 708 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRI-GTVRHKNLIRLLGFCY-NRHQAYLLY 765
G V+VK I+ AT ++E + +RH NL++LLG + Y++
Sbjct: 38 MLGDY-RGNKVAVKCIKNDATAQAFLAE--ASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94
Query: 766 DYLPNGNLSEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
+Y+ G+L + +R++ L V + +L + + + H DL A N++
Sbjct: 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF--V-HRDLAARNVLVS 151
Query: 822 ENMEPHLAEFGF---KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGE 873
E+ +++FG TQ G P K WT E+ +F DV+ FG
Sbjct: 152 EDNVAKVSDFGLTKEASSTQ-DTGKLPVK--WTAPEALREKKFSTK------SDVWSFGI 202
Query: 874 IILEILTNGR 883
++ EI + GR
Sbjct: 203 LLWEIYSFGR 212
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 2e-10
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 716 ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
I V++K++ + K E + + +V + ++ RLLG C L+ +P G
Sbjct: 45 IPVAIKELREATSP-KANKEILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGC 102
Query: 773 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
L + +R +D ++ + +A+G+ +L + H DL A N++ +
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL--V-HRDLAARNVLVKTPQHVKIT 159
Query: 830 EFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIILE 877
+FG + G P I W ES + + DV+ +G + E
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVP--IKWMALESILHRIYTHQ------SDVWSYGVTVWE 211
Query: 878 ILTNGR 883
++T G
Sbjct: 212 LMTFGS 217
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 2e-10
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLS 301
+ +++ ++ + ++ + + + L N+L V + F + +LK+L L
Sbjct: 55 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN-VQHKMFKGLESLKTLMLR 113
Query: 302 DNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNN 351
NR++ +SF L ++RLLSL N+++ P + L SL L + N
Sbjct: 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 27/145 (18%), Positives = 56/145 (38%), Gaps = 7/145 (4%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPW-EFSRVTTLKSLDLSDNRLSGPIPESFADLKN 318
IP+ + T L L N+ F ++ L+ ++ S+N+++ +F
Sbjct: 25 KIPEHIPQYT--AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASG 82
Query: 319 LRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNF 377
+ + L N + + L SL+ L + +N + + + S +R + + N
Sbjct: 83 VNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQI 141
Query: 378 NGSIPPDICSG-GVLFKLILFSNNF 401
++ P L L L +N F
Sbjct: 142 T-TVAPGAFDTLHSLSTLNLLANPF 165
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 2e-10
Identities = 57/267 (21%), Positives = 101/267 (37%), Gaps = 46/267 (17%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQA--YLLYDYL 768
TG V+VK+++ +F I + +++ G Y + L+ +YL
Sbjct: 51 TGALVAVKQLQHSGP--DQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 108
Query: 769 PNGNLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
P+G L + ++ R +++L + +G+ +L + H DL A NI+ +
Sbjct: 109 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC--V-HRDLAARNILVESEAH 165
Query: 826 PHLAEFGF-KYLTQLAD-------GSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFG 872
+A+FG K L D G P I W ES F DV+ FG
Sbjct: 166 VKIADFGLAKLLPLDKDYYVVREPGQSP--IFWYAPESLSDNIFSRQS------DVWSFG 217
Query: 873 EIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL---------VL 923
++ E+ T + + S+ + + + L++ +L V
Sbjct: 218 VVLYELFTYCDKSCSPSAEFLRMMGCERDVPALS-RL--LELLEEGQRLPAPPACPAEVH 274
Query: 924 DVALLCTRSTPSDRPSMEEALKLLSGL 950
++ LC +P DRPS L L
Sbjct: 275 ELMKLCWAPSPQDRPSFSALGPQLDML 301
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 2e-10
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 708 CKAVLPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766
V++K ++ G + E + +RH+ L++L + Y++ +
Sbjct: 284 WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV-MKKLRHEKLVQLYAVV-SEEPIYIVTE 341
Query: 767 YLPNGNLSEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
Y+ G+L + ++ + + + +A G+ ++ Y + H DL+A+NI+ E
Sbjct: 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY--V-HRDLRAANILVGE 398
Query: 823 NMEPHLAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEII 875
N+ +A+FG +Y T FP K WT + E + + DV+ FG ++
Sbjct: 399 NLVCKVADFGLARLIEDNEY-TARQGAKFPIK--WT-APEAALYGRFTIKSDVWSFGILL 454
Query: 876 LEILTNGRLTNAGSSLQ 892
E+ T GR+ G +
Sbjct: 455 TELTTKGRVPYPGMVNR 471
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 5e-10
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 743 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR----DWAAKYKIVLGVARGLC 798
+RH N++RL G+ ++ + YL+ +Y P G + +++ A Y + +A L
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALS 123
Query: 799 FLH-HDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833
+ H H D+K N++ E +A+FG+
Sbjct: 124 YCHSKRVI----HRDIKPENLLLGSAGELKIADFGW 155
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 5e-10
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 31/193 (16%)
Query: 708 CKAVLPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766
A V+VK ++ G+ ++E + T++H L++L + Y++ +
Sbjct: 205 WMATYNKHTKVAVKTMKPGSMSVEAFLAEANV-MKTLQHDKLVKLHAVV-TKEPIYIITE 262
Query: 767 YLPNGNLSEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
++ G+L + +++ +A G+ F+ Y I H DL+A+NI+
Sbjct: 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY--I-HRDLRAANILVSA 319
Query: 823 NMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYG 870
++ +A+FG +Y T FP K WT E+ G F DV+
Sbjct: 320 SLVCKIADFGLARVIEDNEY-TAREGAKFPIK--WTAPEAINFGSFTIK------SDVWS 370
Query: 871 FGEIILEILTNGR 883
FG +++EI+T GR
Sbjct: 371 FGILLMEIVTYGR 383
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 5e-10
Identities = 60/271 (22%), Positives = 108/271 (39%), Gaps = 55/271 (20%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYN--RHQAYLLYDYL 768
TG V+VK ++ A + S + I T+ H+++I+ G C + L+ +Y+
Sbjct: 59 TGEMVAVKALKADAGP-QHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 769 PNGNLSEKIRTKR-------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
P G+L + + +A + G+ +LH Y I H DL A N++ D
Sbjct: 118 PLGSLRDYLPRHSIGLAQLLLFAQ------QICEGMAYLHAQHY--I-HRDLAARNVLLD 168
Query: 822 ENMEPHLAEFGF--------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDV 868
+ + +FG +Y DG P + W E +FY A DV
Sbjct: 169 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP--VFWYAPECLKEYKFYYA------SDV 220
Query: 869 YGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL------- 921
+ FG + E+LT+ + + + + I G+M + + L+ +L
Sbjct: 221 WSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL-RL--TELLERGERLPRPDKCP 277
Query: 922 --VLDVALLCTRSTPSDRPSMEEALKLLSGL 950
V + C + S RP+ E + +L +
Sbjct: 278 AEVYHLMKNCWETEASFRPTFENLIPILKTV 308
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 1e-09
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 32/186 (17%)
Query: 716 ITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
+TV+VK ++ V EF+ ++H NL++LLG C Y++ +++ GN
Sbjct: 39 LTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 95
Query: 773 LSEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828
L + +R + ++ + +L + I H DL A N + EN +
Sbjct: 96 LLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF--I-HRDLAARNCLVGENHLVKV 152
Query: 829 AEFGF------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIILE 877
A+FG T A FP K WT ES +F DV+ FG ++ E
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFSIK------SDVWAFGVLLWE 204
Query: 878 ILTNGR 883
I T G
Sbjct: 205 IATYGM 210
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 1e-09
Identities = 44/258 (17%), Positives = 92/258 (35%), Gaps = 51/258 (19%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGF----------------CYN 757
G T +K++++ K E + + + H N++ G
Sbjct: 35 DGKTYVIKRVKY--NNEKAERE-VKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91
Query: 758 RHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLG----VARGLCFLHHDCYPAIPHGDL 813
++ ++ G L + I +R + L + +G+ ++H + + DL
Sbjct: 92 TKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDL 148
Query: 814 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA---MKEEMY---MD 867
K SNI + + + +FG T L + + T Y + + + Y +D
Sbjct: 149 KPSNIFLVDTKQVKIGDFGLV--TSLKNDGKRTRSKGT---LRYMSPEQISSQDYGKEVD 203
Query: 868 VYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927
+Y G I+ E+L S DG++ +++ + ++ +L
Sbjct: 204 LYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF-------DKKEKTLLQKLLSK-- 254
Query: 928 LCTRSTPSDRPSMEEALK 945
P DRP+ E L+
Sbjct: 255 -----KPEDRPNTSEILR 267
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 743 VRHKNLIRLLGFCYNR----HQAYLLYDYLPNGNLSEKIRTKRDWAAKY------KIVLG 792
H N++RL+ +C H+A+LL + G L +I +D ++LG
Sbjct: 83 FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142
Query: 793 VARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833
+ RGL +H H DLK +NI+ + +P L + G
Sbjct: 143 ICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGS 180
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 2e-09
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 743 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR----DWAAKYKIVLGVARGLC 798
+RH N++R+ + ++R + YL+ ++ P G L ++++ +A + + +A L
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--MEELADALH 128
Query: 799 FLH-HDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833
+ H H D+K N++ E +A+FG+
Sbjct: 129 YCHERKVI----HRDIKPENLLMGYKGELKIADFGW 160
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 716 ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
I V++K++ + K E + + +V + ++ RLLG C L+ +P G
Sbjct: 45 IPVAIKELREATSP-KANKEILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGC 102
Query: 773 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
L + +R +D ++ + +A+G+ +L + H DL A N++ +
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL--V-HRDLAARNVLVKTPQHVKIT 159
Query: 830 EFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIILE 877
+FG + G P I W ES + + DV+ +G + E
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVP--IKWMALESILHRIYTHQ------SDVWSYGVTVWE 211
Query: 878 ILTNGR 883
++T G
Sbjct: 212 LMTFGS 217
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 2e-09
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 31/193 (16%)
Query: 708 CKAVLPTGITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLL 764
V++K I GA +FI + + H L++L G C + L+
Sbjct: 25 HLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 765 YDYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
+++ +G LS+ +RT+R A ++ L V G+ +L C I H DL A N +
Sbjct: 82 TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV--I-HRDLAARNCLVG 138
Query: 822 ENMEPHLAEFGF-KYL-----TQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYG 870
EN +++FG +++ T FP K W E + + DV+
Sbjct: 139 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--WASPEVFSFSRYSSK------SDVWS 190
Query: 871 FGEIILEILTNGR 883
FG ++ E+ + G+
Sbjct: 191 FGVLMWEVFSEGK 203
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 4e-09
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 31/186 (16%)
Query: 716 ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
I V +K IE + R + G++ H +++RLLG C L+ YLP G+
Sbjct: 43 IPVCIKVIEDKSGR-QSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGS 100
Query: 773 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
L + +R R ++ + +A+G+ +L + H +L A N++ + +A
Sbjct: 101 LLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM--V-HRNLAARNVLLKSPSQVQVA 157
Query: 830 EFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIILE 877
+FG ++ P K W ES G++ + DV+ +G + E
Sbjct: 158 DFGVADLLPPDDKQLLYSEAKTPIK--WMALESIHFGKYTHQ------SDVWSYGVTVWE 209
Query: 878 ILTNGR 883
++T G
Sbjct: 210 LMTFGA 215
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 5e-09
Identities = 47/255 (18%), Positives = 89/255 (34%), Gaps = 45/255 (17%)
Query: 714 TGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLG----FCYNRHQAYLLY 765
T + V+ +++ + R + E + ++H N++R + L+
Sbjct: 50 TTVEVAWCELQDRKLTKSERQRFKEE-AEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108
Query: 766 DYLPNGNLSEKI-RTKR-DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-E 822
+ + +G L + R K + +GL FLH P I H DLK NI
Sbjct: 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH-TRTPPIIHRDLKCDNIFITGP 167
Query: 823 NMEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM-------DVYGFGEI 874
+ + G + + M EMY DVY FG
Sbjct: 168 TGSVKIGDLGLATLKRASFAKAVIGTPEF---------MAPEMYEEKYDESVDVYAFGMC 218
Query: 875 ILEILTN----GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCT 930
+LE+ T+ NA + + + G+ +++ +++ I+ C
Sbjct: 219 MLEMATSEYPYSECQNA-AQIYRRVTSGVKPASFDKVA---IPEVKEIIE-------GCI 267
Query: 931 RSTPSDRPSMEEALK 945
R +R S+++ L
Sbjct: 268 RQNKDERYSIKDLLN 282
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 5e-09
Identities = 54/268 (20%), Positives = 109/268 (40%), Gaps = 47/268 (17%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQA--YLLYDYL 768
TG V+VKK++ + + +F I +++H N+++ G CY+ + L+ +YL
Sbjct: 38 TGEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 769 PNGNLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
P G+L + ++ ++ K++ + +G+ +L Y I H DL NI+ +
Sbjct: 96 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY--I-HRDLATRNILVENENR 152
Query: 826 PHLAEFGF--------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFG 872
+ +FG ++ G P I W ES +F A DV+ FG
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEPGESP--IFWYAPESLTESKFSVA------SDVWSFG 204
Query: 873 EIILEILTNGRLTNAGSSLQNKPIDGL-LGEMYNENEVGSSSSLQDEIKL---------V 922
++ E+ T + + + + I G+M + L++ +L +
Sbjct: 205 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF-HL--IELLKNNGRLPRPDGCPDEI 261
Query: 923 LDVALLCTRSTPSDRPSMEEALKLLSGL 950
+ C + + RPS + + +
Sbjct: 262 YMIMTECWNNNVNQRPSFRDLALRVDQI 289
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 6e-09
Identities = 26/132 (19%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 712 LPTGITVSVK-----KIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766
+ TG+ V++K + ++ +E + ++H +++ L + + + YL+ +
Sbjct: 33 IHTGLEVAIKMIDKKAMYKAGMVQRVQNE-VKIHCQLKHPSILELYNYFEDSNYVYLVLE 91
Query: 767 YLPNGNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
NG ++ ++ + + A + + + G+ +LH I H DL SN++
Sbjct: 92 MCHNGEMNRYLKNRVKPFSENEARHF--MHQIITGMLYLHSHG---ILHRDLTLSNLLLT 146
Query: 822 ENMEPHLAEFGF 833
NM +A+FG
Sbjct: 147 RNMNIKIADFGL 158
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 6e-09
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 33/194 (17%)
Query: 708 CKAVLPTGITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLL 764
V+VK I+ G+ EF + + H L++ G C + Y++
Sbjct: 25 KLGKWKGQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 765 YDYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
+Y+ NG L +R+ +++ V G+ FL + I H DL A N + D
Sbjct: 82 TEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF--I-HRDLAARNCLVD 138
Query: 822 ENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVY 869
++ +++FG +Y++ FP K W+ E ++ + DV+
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSS-VGTKFPVK--WSAPEVFHYFKYSSK------SDVW 189
Query: 870 GFGEIILEILTNGR 883
FG ++ E+ + G+
Sbjct: 190 AFGILMWEVFSLGK 203
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 6e-09
Identities = 39/197 (19%), Positives = 79/197 (40%), Gaps = 33/197 (16%)
Query: 708 CKAVLPTG---ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQA 761
K TV+VK ++ A + E + + + + ++R++G C
Sbjct: 34 KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92
Query: 762 YLLYDYLPNGNLSEKIRTKRDWAAK--YKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 819
L+ + G L++ ++ R K ++V V+ G+ +L + + H DL A N++
Sbjct: 93 MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF--V-HRDLAARNVL 149
Query: 820 FDENMEPHLAEFGF-KYLTQLAD-------GSFPAKIAWT--ES---GEFYNAMKEEMYM 866
+++FG K L + G +P + W E +F +
Sbjct: 150 LVTQHYAKISDFGLSKALRADENYYKAQTHGKWP--VKWYAPECINYYKFSSK------S 201
Query: 867 DVYGFGEIILEILTNGR 883
DV+ FG ++ E + G+
Sbjct: 202 DVWSFGVLMWEAFSYGQ 218
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 7e-09
Identities = 39/194 (20%), Positives = 81/194 (41%), Gaps = 33/194 (17%)
Query: 708 CKAVLPTGITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLL 764
V++K I+ G+ EFI ++ + H+ L++L G C + +++
Sbjct: 41 KYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 765 YDYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
+Y+ NG L +R R +++ V + +L + + H DL A N + +
Sbjct: 98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF--L-HRDLAARNCLVN 154
Query: 822 ENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVY 869
+ +++FG +Y + FP + W+ E +F + D++
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVR--WSPPEVLMYSKFSSK------SDIW 205
Query: 870 GFGEIILEILTNGR 883
FG ++ EI + G+
Sbjct: 206 AFGVLMWEIYSLGK 219
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 7e-09
Identities = 25/131 (19%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 712 LPTGITVSVK-----KIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766
T + K + R K+ E I+ ++ H++++ GF + +++ +
Sbjct: 37 ADTKEVFAGKIVPKSLLLKPHQREKMSME-ISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 95
Query: 767 YLPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
+L E + ++ A Y + + G +LH + + H DLK N+ +E
Sbjct: 96 LCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQYLHRNR---VIHRDLKLGNLFLNE 150
Query: 823 NMEPHLAEFGF 833
++E + +FG
Sbjct: 151 DLEVKIGDFGL 161
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 7e-09
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 35/195 (17%)
Query: 708 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLL 764
V+VK ++ G+ F+ ++H+ L+RL + Y++
Sbjct: 30 WMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYII 85
Query: 765 YDYLPNGNLSEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820
+Y+ NG+L + ++T + +A G+ F+ Y I H DL+A+NI+
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--I-HRDLRAANILV 142
Query: 821 DENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDV 868
+ + +A+FG +Y T FP K WT E+ G F DV
Sbjct: 143 SDTLSCKIADFGLARLIEDNEY-TAREGAKFPIK--WTAPEAINYGTFTIK------SDV 193
Query: 869 YGFGEIILEILTNGR 883
+ FG ++ EI+T+GR
Sbjct: 194 WSFGILLTEIVTHGR 208
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 8e-09
Identities = 25/131 (19%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 712 LPTGITVSVK-----KIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766
T + K + R K+ E I+ ++ H++++ GF + +++ +
Sbjct: 63 ADTKEVFAGKIVPKSLLLKPHQREKMSME-ISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 121
Query: 767 YLPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
+L E + ++ A Y + + G +LH + + H DLK N+ +E
Sbjct: 122 LCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQYLHRNR---VIHRDLKLGNLFLNE 176
Query: 823 NMEPHLAEFGF 833
++E + +FG
Sbjct: 177 DLEVKIGDFGL 187
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 9e-09
Identities = 57/267 (21%), Positives = 101/267 (37%), Gaps = 72/267 (26%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRIG-------TVRHKNLIRLLGFCYNRHQAYLL 764
+ TG V++K I+ + ++ + ++ + H N+++L YL+
Sbjct: 37 ILTGREVAIKIID----KTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92
Query: 765 YDYLPNGNLSEKI----RTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNI 818
+Y G + + + R K A +IV V + H I H DLKA N+
Sbjct: 93 MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ----YCHQKR---IVHRDLKAENL 145
Query: 819 VFDENMEPHLAEFGFKYLTQLADGSF------------PAKIAWTESGEFYNAMKEEMYM 866
+ D +M +A+FGF + G P G+ Y+ + +
Sbjct: 146 LLDADMNIKIADFGFS--NEFTVGGKLDAFCGAPPYAAPELF----QGKKYDGPE----V 195
Query: 867 DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGL-LGEMYNENEVGS-------SSSLQDE 918
DV+ G +IL L +G L P DG L E+ G S+ ++
Sbjct: 196 DVWSLG-VILYTLVSGSL----------PFDGQNLKELRERVLRGKYRIPFYMSTDCENL 244
Query: 919 IKLVLDVALLCTRSTPSDRPSMEEALK 945
+K L + P R ++E+ +K
Sbjct: 245 LKRFLVL-------NPIKRGTLEQIMK 264
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 1e-08
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 50/212 (23%)
Query: 708 CKAVL---PTGITVSVKKIEWGAT---RIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRH 759
KA + + ++K+++ A+ E + ++G H N+I LLG C +R
Sbjct: 42 LKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG--HHPNIINLLGACEHRG 99
Query: 760 QAYLLYDYLPNGNLSEKIRTKRDWAAKY------------------KIVLGVARGLCFLH 801
YL +Y P+GNL + +R R VARG+ +L
Sbjct: 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 159
Query: 802 HDCYPAIPHGDLKASNIVFDENMEPHLAEFGF----KYLTQLADGSFPAKIAWT--ESGE 855
+ I H DL A NI+ EN +A+FG + + G P + W ES
Sbjct: 160 QKQF--I-HRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR--WMAIES-- 212
Query: 856 FYNAMKEEMYM---DVYGFGEIIL-EILTNGR 883
+ +Y DV+ +G ++L EI++ G
Sbjct: 213 ----LNYSVYTTNSDVWSYG-VLLWEIVSLGG 239
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQA--YLLYDYL 768
TG V+VKK++ + + +F I +++H N+++ G CY+ + L+ +YL
Sbjct: 69 TGEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 126
Query: 769 PNGNLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
P G+L + ++ ++ K++ + +G+ +L Y I H DL NI+ +
Sbjct: 127 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY--I-HRDLATRNILVENENR 183
Query: 826 PHLAEFGF--------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFG 872
+ +FG +Y G P I W ES +F A DV+ FG
Sbjct: 184 VKIGDFGLTKVLPQDKEYYKVKEPGESP--IFWYAPESLTESKFSVA------SDVWSFG 235
Query: 873 EIILEILTNGRLTNAGSSLQNKPI 896
++ E+ T + + + + I
Sbjct: 236 VVLYELFTYIEKSKSPPAEFMRMI 259
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 56.5 bits (136), Expect = 2e-08
Identities = 24/185 (12%), Positives = 50/185 (27%), Gaps = 28/185 (15%)
Query: 718 VSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 777
V W I ++ + R+ ++ ++ + L+ + G L I
Sbjct: 102 VQKPANPW---EFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAI 158
Query: 778 RTKRDWAAKY-------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830
++ K + + + +H I HGD+K N + E
Sbjct: 159 NLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215
Query: 831 FGFKYLTQLAD-GSFPAKIAWTESGEFYNAMKEEMYM--------------DVYGFGEII 875
L D G + + F + + D +G +
Sbjct: 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATV 275
Query: 876 LEILT 880
+L
Sbjct: 276 YCMLF 280
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 2e-08
Identities = 39/216 (18%), Positives = 76/216 (35%), Gaps = 26/216 (12%)
Query: 380 SIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDI 439
+ V + S +L LS CS L L LE S I ++ ++
Sbjct: 85 PLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNL 144
Query: 440 NYIDLSR-NGFT-GGIPTDINQASKLEYFNVSNNPKLG--GMIPAQTWSLPSLQNFSASA 495
++LS +GF+ + T ++ S+L+ N+S + A ++ + S
Sbjct: 145 VRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204
Query: 496 CNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIP-EVLA 554
K++ + V C L +DL+++ ++ + +
Sbjct: 205 Y-----------RKNLQ---------KSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF 244
Query: 555 RLPVLGVLDLSH-NSLSGQIPAKFGSCSSLTVLNVS 589
+L L L LS + + + G +L L V
Sbjct: 245 QLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVF 280
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 30/227 (13%)
Query: 373 STNNFNGSIPPDICSGGVLFKLILFS--NNFTGSLSPSLSNCSSLVRLRLEDNSFS-GEI 429
+ + ++ PD+ + +I F +F + + + L ++ +
Sbjct: 51 TLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTL 110
Query: 430 PLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLG-GMIPAQTWSLPSL 488
SQ + + L + I + + S L N+S + S L
Sbjct: 111 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 170
Query: 489 QNFSASAC-NITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLAN-NKLI 546
+ S C + T + V +H + +++L+ K +
Sbjct: 171 DELNLSWCFDFTEK--------HVQVAVAH-------------VSETITQLNLSGYRKNL 209
Query: 547 G--SIPEVLARLPVLGVLDLSH-NSLSGQIPAKFGSCSSLTVLNVSF 590
+ ++ R P L LDLS L +F + L L++S
Sbjct: 210 QKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSR 256
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 38/198 (19%), Positives = 81/198 (40%), Gaps = 35/198 (17%)
Query: 708 CKAVLPTG---ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQA 761
+ V I V++K ++ G + E + +I + + ++RL+G C
Sbjct: 353 RQGVYRMRKKQIDVAIKVLKQGTEK-ADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 410
Query: 762 YLLYDYLPNGNLSEKIRTKRD---WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 818
L+ + G L + + KR+ + +++ V+ G+ +L + + H +L A N+
Sbjct: 411 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF--V-HRNLAARNV 467
Query: 819 VFDENMEPHLAEFGF--------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMY 865
+ +++FG Y T + G +P + W E +F +
Sbjct: 468 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP--LKWYAPECINFRKFSSR------ 519
Query: 866 MDVYGFGEIILEILTNGR 883
DV+ +G + E L+ G+
Sbjct: 520 SDVWSYGVTMWEALSYGQ 537
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 44/272 (16%), Positives = 89/272 (32%), Gaps = 58/272 (21%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGF-------------CYNRHQ 760
++KKI ++ + + + ++ H+ ++R +
Sbjct: 30 DSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89
Query: 761 AYLLYDYLPNGNLSEKIRTK-----RDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDL 813
++ +Y NG L + I ++ RD + +I+ ++ ++H I H DL
Sbjct: 90 LFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALS----YIHSQ---GIIHRDL 142
Query: 814 KASNIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMK-EEMYM----- 866
K NI DE+ + +FG K + + D S + + MY+
Sbjct: 143 KPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202
Query: 867 ----------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN---ENEVGSSS 913
D+Y G II + T + + L + +
Sbjct: 203 DGTGHYNEKIDMYSLG-IIFFEMIYPFSTG---MERVNILKKLRSVSIEFPPDFDDNKMK 258
Query: 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
+ I+L++D P+ RP L
Sbjct: 259 VEKKIIRLLIDH-------DPNKRPGARTLLN 283
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 3e-08
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 519 NNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFG 578
+ G + ELE + N + SI L +L L L+LS N +SG +
Sbjct: 28 RSNEGKLEGLTDEFEELEFLSTINVG-LTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAE 85
Query: 579 SCSSLTVLNVSFNDIS 594
C +LT LN+S N I
Sbjct: 86 KCPNLTHLNLSGNKIK 101
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 6e-08
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
E+++L L+ SI L L KL+ L L N+++G + + L L+L
Sbjct: 38 TDEFEELEFLSTINVGLT-SI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95
Query: 301 SDNRLSGP-IPESFADLKNLRLLSLMYN---EMSGTVPESLVQLPSLEIL 346
S N++ E L+NL+ L L ++ LP L L
Sbjct: 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYL 145
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 7e-06
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 484 SLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANN 543
L+ S +T ++ + +E N +SG + C L ++L+ N
Sbjct: 40 EFEELEFLSTINVGLT-SIANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGN 98
Query: 544 KLIGSIPEV--LARLPVLGVLDLSHN 567
K I + + L +L L LDL +
Sbjct: 99 K-IKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 7e-05
Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 4/111 (3%)
Query: 267 NLTKLESLFLFRNQL-AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325
+ ++ L L ++ G++ L+ L + L+ + L L+ L L
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT--SIANLPKLNKLKKLELS 72
Query: 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSG-SLPENLGRNSKLRWVDVSTN 375
N +SG + + P+L L + N S E L + L+ +D+
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 49/240 (20%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
SVP+ I + L+L + + + F L +L+L N L + A
Sbjct: 28 SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSA-------- 76
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLA 282
+ L + L +A L+ S+P + +LT+L+ L+L NQL
Sbjct: 77 ------------GVFDDLTEL---GTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLK 120
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPES-FADLKNLRLLSLMYNEMSGTVPESLVQLP 341
F R+T LK L L+ N+L IP F L NL+ LSL N++ + +L
Sbjct: 121 SLPSGVFDRLTKLKELRLNTNQLQS-IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLG 179
Query: 342 SLEILFIWNN----------YFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDI--CSGG 389
L+ + ++ N Y S + EN K++ + + PD CS G
Sbjct: 180 KLQTITLFGNQFDCSRCEILYLSQWIRENSN---KVKDGTGQNLHES----PDGVTCSDG 232
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 45/172 (26%), Positives = 68/172 (39%), Gaps = 18/172 (10%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
S+P + T E L L LA F +T L L+L N+L F DL L
Sbjct: 28 SVPSGIPADT--EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTEL 85
Query: 320 RLLSLMYNEMSGTVPESLV-QLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNF 377
L L N+++ ++P + L L+ L++ N SLP + +KL+ + ++TN
Sbjct: 86 GTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQL 143
Query: 378 NGSIPPDICSGGV------LFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDN 423
SIP G L L L +N + L + L N
Sbjct: 144 Q-SIPA-----GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 18/172 (10%)
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295
IP ++ + LD+ L+ LTKL L L NQL F +T L
Sbjct: 32 GIP------ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTEL 85
Query: 296 KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE----SLVQLPSLEILFIWNN 351
+L L++N+L+ F L L L L N++ ++P L + L+ L + N
Sbjct: 86 GTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTK---LKELRLNTN 141
Query: 352 YFSGSLPENLGRN-SKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNF 401
S+P + L+ + +STN S+P G L + LF N F
Sbjct: 142 QLQ-SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQF 191
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 4e-08
Identities = 59/276 (21%), Positives = 102/276 (36%), Gaps = 73/276 (26%)
Query: 716 ITVSVKKIEWGATRIKIVSEFIT---RIGTVRHKNLIRLLGFC-----YNRHQAYLLYDY 767
+ V+VK ++ + + + EF++ + H N+IRLLG C + ++ +
Sbjct: 63 LKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPF 122
Query: 768 LPNGNLSEKIRTKRDWAAKY--------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 819
+ G+L + R K ++ +A G+ +L + + + H DL A N +
Sbjct: 123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNF--L-HRDLAARNCM 179
Query: 820 FDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMD 867
++M +A+FG Y Q P K W ES + + D
Sbjct: 180 LRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK--WIAIESLADRVYTSK------SD 231
Query: 868 VYGFGEIILEILTNGR-----LTNA--------GSSLQNKPIDGLLGEMYNENEVGSSSS 914
V+ FG + EI T G + N G L+ +P + L E+Y
Sbjct: 232 VWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLK-QP-EDCLDELYE--------- 280
Query: 915 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950
+ C R+ P DRP+ L L
Sbjct: 281 ----------IMYSCWRTDPLDRPTFSVLRLQLEKL 306
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 4e-08
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 519 NNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFG 578
+ G I + V LE + L N + S+ L +LP L L+LS N + G +
Sbjct: 35 KSNDGKIEGLTAEFVNLEFLSLINVG-LISV-SNLPKLPKLKKLELSENRIFGGLDMLAE 92
Query: 579 SCSSLTVLNVSFNDIS 594
+LT LN+S N +
Sbjct: 93 KLPNLTHLNLSGNKLK 108
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 9e-08
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
+++L + L S+ L L KL+ L L N++ G + ++ L L+L
Sbjct: 45 TAEFVNLEFLSLINVGLI-SVSN-LPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102
Query: 301 SDNRLSGP-IPESFADLKNLRLLSLMYN---EMSGTVPESLVQLPSLEIL 346
S N+L E L+ L+ L L ++ LP L L
Sbjct: 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYL 152
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 3e-06
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Query: 484 SLPSLQNFSASACNIT--GNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLA 541
+L+ S + NLP K + + N + G + L ++L+
Sbjct: 47 EFVNLEFLSLINVGLISVSNLPKLPKLKKLEL---SENRIFGGLDMLAEKLPNLTHLNLS 103
Query: 542 NNKLIGSIPEV--LARLPVLGVLDLSHNSLS 570
NK + I + L +L L LDL + ++
Sbjct: 104 GNK-LKDISTLEPLKKLECLKSLDLFNCEVT 133
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 29/158 (18%)
Query: 294 TLKSLDLSDNRLS-GPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNY 352
++ L L + + + G I A+ NL LSL+ + +L +LP L+ L + N
Sbjct: 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENR 82
Query: 353 FSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNC 412
G L + L +++S N DI +L P L
Sbjct: 83 IFGGLDMLAEKLPNLTHLNLSGNKLK-----DI-----------------STLEP-LKKL 119
Query: 413 SSLVRLRLEDNSFSGEIPLK---FSQLPDINYIDLSRN 447
L L L + + + F LP + Y+D
Sbjct: 120 ECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDR 157
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 6/112 (5%)
Query: 267 NLTKLESLFLFRNQLA-GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325
+ L L + G++ + L+ L L + L + L L+ L L
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI--SVSNLPKLPKLKKLELS 79
Query: 326 YNEMSGTVPESLVQLPSLEILFIWNNYFS--GSLPENLGRNSKLRWVDVSTN 375
N + G + +LP+L L + N +L E L + L+ +D+
Sbjct: 80 ENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTL-EPLKKLECLKSLDLFNC 130
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 4e-08
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 31/187 (16%)
Query: 716 ITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
+ V++K ++ G T + +F++ G H N+IRL G A ++ +Y+ NG+
Sbjct: 78 VPVAIKALKAGYTE-RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS 136
Query: 773 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
L +RT ++V GV G+ +L Y + H DL A N++ D N+ ++
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY--V-HRDLAARNVLVDSNLVCKVS 193
Query: 830 EFGF-KYLTQLAD-------GSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIIL 876
+FG + L D G P + WT E+ F +A DV+ FG ++
Sbjct: 194 DFGLSRVLEDDPDAAYTTTGGKIPIR--WTAPEAIAFRTFSSA------SDVWSFGVVMW 245
Query: 877 EILTNGR 883
E+L G
Sbjct: 246 EVLAYGE 252
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 5e-08
Identities = 67/282 (23%), Positives = 108/282 (38%), Gaps = 80/282 (28%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
+TV+VK ++ AT +VSE +HKN+I LLG C Y++ +Y GN
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 127
Query: 773 LSEKIRTKRDWAAKY------------------KIVLGVARGLCFLHHDCYPAIPHGDLK 814
L E +R +R +Y +ARG+ +L I H DL
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC--I-HRDLA 184
Query: 815 ASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMY 865
A N++ EN +A+FG Y + +G P K W E+ + + +Y
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK--WMAPEA------LFDRVY 236
Query: 866 M---DVYGFGEIIL-EILTNGR-----LTNA--------GSSLQNKPIDGLLGEMYNENE 908
DV+ FG +++ EI T G + G + KP E+Y
Sbjct: 237 THQSDVWSFG-VLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD-KP-ANCTNELYM--- 290
Query: 909 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950
+ C + PS RP+ ++ ++ L +
Sbjct: 291 ----------------MMRDCWHAVPSQRPTFKQLVEDLDRI 316
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 5e-08
Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 35/198 (17%)
Query: 708 CKAVLPTG---ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQA 761
+ V I V++K ++ G + E + +I + + ++RL+G C
Sbjct: 27 RQGVYRMRKKQIDVAIKVLKQGTEK-ADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 84
Query: 762 YLLYDYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNI 818
L+ + G L + + KR+ + V+ G+ +L + + H DL A N+
Sbjct: 85 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF--V-HRDLAARNV 141
Query: 819 VFDENMEPHLAEFGF--------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMY 865
+ +++FG Y T + G +P + W E +F +
Sbjct: 142 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP--LKWYAPECINFRKFSSR------ 193
Query: 866 MDVYGFGEIILEILTNGR 883
DV+ +G + E L+ G+
Sbjct: 194 SDVWSYGVTMWEALSYGQ 211
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 5e-08
Identities = 69/284 (24%), Positives = 111/284 (39%), Gaps = 84/284 (29%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
+TV+VK ++ AT +VSE + IG +HKN+I LLG C Y++ +Y
Sbjct: 114 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASK 171
Query: 771 GNLSEKIRTKRDWAAKY------------------KIVLGVARGLCFLHHDCYPAIPHGD 812
GNL E +R +R +Y +ARG+ +L I H D
Sbjct: 172 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC--I-HRD 228
Query: 813 LKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEE 863
L A N++ EN +A+FG Y + +G P K W E+ + +
Sbjct: 229 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK--WMAPEA------LFDR 280
Query: 864 MYM---DVYGFGEIIL-EILTNGR-----LTNA--------GSSLQNKPIDGLLGEMYNE 906
+Y DV+ FG +++ EI T G + G + KP E+Y
Sbjct: 281 VYTHQSDVWSFG-VLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD-KP-ANCTNELYM- 336
Query: 907 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950
+ C + PS RP+ ++ ++ L +
Sbjct: 337 ------------------MMRDCWHAVPSQRPTFKQLVEDLDRI 362
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 6e-08
Identities = 54/277 (19%), Positives = 97/277 (35%), Gaps = 74/277 (26%)
Query: 716 ITVSVKKIEWGATRIKIVSEFIT---RIGTVRHKNLIRLLGFC------YNRHQAYLLYD 766
+ V+VK ++ + EF+ + H ++ +L+G ++
Sbjct: 52 VKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILP 111
Query: 767 YLPNGNLSEKIRTKRDWAAKYKIVLG--------VARGLCFLHHDCYPAIPHGDLKASNI 818
++ +G+L + R + + L +A G+ +L + I H DL A N
Sbjct: 112 FMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNF--I-HRDLAARNC 168
Query: 819 VFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYM 866
+ E+M +A+FG Y Q P K W ES +
Sbjct: 169 MLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVK--WLALESLADNLYTVH------S 220
Query: 867 DVYGFGEIILEILTNGR-----LTNA--------GSSLQNKPIDGLLGEMYNENEVGSSS 913
DV+ FG + EI+T G+ + NA G+ L+ +P + E+Y+
Sbjct: 221 DVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLK-QP-PECMEEVYD-------- 270
Query: 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950
+ C + P RPS L +
Sbjct: 271 -----------LMYQCWSADPKQRPSFTCLRMELENI 296
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 9e-08
Identities = 67/281 (23%), Positives = 108/281 (38%), Gaps = 84/281 (29%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
V+VK ++ AT ++SE + IG +HKN+I LLG C Y++ +Y
Sbjct: 102 TKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASK 159
Query: 771 GNLSEKIRTKRDWAAKYKIVLG------------------VARGLCFLHHDCYPAIPHGD 812
GNL E ++ +R +Y VARG+ +L I H D
Sbjct: 160 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC--I-HRD 216
Query: 813 LKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEE 863
L A N++ E+ +A+FG Y + +G P K W E+ + +
Sbjct: 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK--WMAPEA------LFDR 268
Query: 864 MYM---DVYGFGEIIL-EILTNGR-----LTNA--------GSSLQNKPIDGLLGEMYNE 906
+Y DV+ FG ++L EI T G + G + KP E+Y
Sbjct: 269 IYTHQSDVWSFG-VLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD-KP-SNCTNELYM- 324
Query: 907 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 947
+ C + PS RP+ ++ ++ L
Sbjct: 325 ------------------MMRDCWHAVPSQRPTFKQLVEDL 347
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 9e-08
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 743 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR--DWAAKYKIVLGVAR----- 795
++++ + G N + Y++Y+Y+ N ++ + D I + V +
Sbjct: 100 IKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKS 159
Query: 796 ---GLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833
++H+ I H D+K SNI+ D+N L++FG
Sbjct: 160 VLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGE 198
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 1e-07
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 35/199 (17%)
Query: 708 CKAVLPTG----ITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQ 760
C L I+V++K ++ G T K +F+ G H N+IRL G
Sbjct: 62 CSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 761 AYLLYDYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASN 817
++ +Y+ NG+L +R ++V G+A G+ +L Y + H DL A N
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--V-HRDLAARN 177
Query: 818 IVFDENMEPHLAEFGF-------KYLTQLADGS-FPAKIAWT--ES---GEFYNAMKEEM 864
I+ + N+ +++FG G P + WT E+ +F +A
Sbjct: 178 ILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR--WTSPEAIAYRKFTSA----- 230
Query: 865 YMDVYGFGEIILEILTNGR 883
DV+ +G ++ E+++ G
Sbjct: 231 -SDVWSYGIVLWEVMSYGE 248
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 1e-07
Identities = 44/202 (21%), Positives = 79/202 (39%), Gaps = 48/202 (23%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
+ V+VK ++ A + ++SE ++ +G +H+N++ LLG C + ++ +Y
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLG--QHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 771 GNLSEKIRTKRDWAAKY----------------KIVLGVARGLCFLHHDCYPAIPHGDLK 814
G+L +R K VA+G+ FL I H D+
Sbjct: 135 GDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC--I-HRDVA 191
Query: 815 ASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMY 865
A N++ + +FG + P K W ES + + +Y
Sbjct: 192 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK--WMAPES------IFDCVY 243
Query: 866 M---DVYGFGEIIL-EILTNGR 883
DV+ +G I+L EI + G
Sbjct: 244 TVQSDVWSYG-ILLWEIFSLGL 264
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 1e-07
Identities = 38/185 (20%), Positives = 79/185 (42%), Gaps = 30/185 (16%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
+ V++K + + R K + E +T + H ++++L+G + +++ + G
Sbjct: 419 MAVAIKTCKNCTSDSVREKFLQEALT-MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 476
Query: 773 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
L ++ ++ ++ ++ L +L + + H D+ A N++ N L
Sbjct: 477 LRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF--V-HRDIAARNVLVSSNDCVKLG 533
Query: 830 EFGF-KYL-----TQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIILEI 878
+FG +Y+ + + G P K W ES F +A DV+ FG + EI
Sbjct: 534 DFGLSRYMEDSTYYKASKGKLPIK--WMAPESINFRRFTSA------SDVWMFGVCMWEI 585
Query: 879 LTNGR 883
L +G
Sbjct: 586 LMHGV 590
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 1e-07
Identities = 50/206 (24%), Positives = 78/206 (37%), Gaps = 52/206 (25%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
+TV+VK ++ A R ++SE ++ +G H N++ LLG C ++ +Y
Sbjct: 54 MTVAVKMLKPSAHLTEREALMSELKVLSYLG--NHMNIVNLLGACTIGGPTLVITEYCCY 111
Query: 771 GNLSEKIRTKRDWAAKYKIVLG--------------------VARGLCFLHHDCYPAIPH 810
G+L +R KRD K VA+G+ FL I H
Sbjct: 112 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC--I-H 168
Query: 811 GDLKASNIVFDENMEPHLAEFGFKYLTQLAD-------GSFPAKIAWT--ESGEFYNAMK 861
DL A NI+ + +FG + P K W ES +
Sbjct: 169 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK--WMAPES------IF 220
Query: 862 EEMYM---DVYGFGEIIL-EILTNGR 883
+Y DV+ +G I L E+ + G
Sbjct: 221 NCVYTFESDVWSYG-IFLWELFSLGS 245
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 44/194 (22%)
Query: 716 ITVSVKKIEWGAT-RIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771
++V+VK ++ + + + +FI ++ H+NLIRL G ++ + P G
Sbjct: 47 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLG 105
Query: 772 NLSEKIRTKR---------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
+L +++R + +A VA G+ +L + I H DL A N++
Sbjct: 106 SLLDRLRKHQGHFLLGTLSRYAV------QVAEGMGYLESKRF--I-HRDLAARNLLLAT 156
Query: 823 NMEPHLAEFGF-KYLTQLAD-------GSFPAKIAWT--ES---GEFYNAMKEEMYMDVY 869
+ +FG + L Q D P AW ES F +A D +
Sbjct: 157 RDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--FAWCAPESLKTRTFSHA------SDTW 208
Query: 870 GFGEIILEILTNGR 883
FG + E+ T G+
Sbjct: 209 MFGVTLWEMFTYGQ 222
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 53.1 bits (127), Expect = 2e-07
Identities = 32/221 (14%), Positives = 59/221 (26%), Gaps = 38/221 (17%)
Query: 745 HKNLIRLLG-FCYNRHQAYLLYDYLPNGNLSEKI---------RTKRDWAAKYKIVLGVA 794
K +IR+ + NL A+ ++ L V
Sbjct: 157 KKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVI 216
Query: 795 RGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY---LTQLADGSFPAKIA-- 849
R L LHH + H L+ +IV D+ L F ++ S
Sbjct: 217 RLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPE 272
Query: 850 --WTESGEFYNAMKEEMY---MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY 904
+ Y+ + + D + G +I I L + E
Sbjct: 273 LEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC-ADLPITKDAALG------GSEWI 325
Query: 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
+ ++ ++ L DR +A++
Sbjct: 326 FRSCKNIPQPVRALLEGFLRY-------PKEDRLLPLQAME 359
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 48/275 (17%), Positives = 91/275 (33%), Gaps = 73/275 (26%)
Query: 713 PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
P+ + V+VK + + + + E I H+N++R +G ++L + +
Sbjct: 58 PSPLQVAVKTLPEVCSEQDELDFLME-ALIISKFNHQNIVRCIGVSLQSLPRFILMELMA 116
Query: 770 NGNLSEKIRTKRDWAAKY---------KIVLGVARGLCFLHHDCYPAIPHGDLKASNI-- 818
G+L +R R ++ + +A G +L + + I H D+ A N
Sbjct: 117 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF--I-HRDIAARNCLL 173
Query: 819 -VFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMYM-- 866
+ +FG Y + P K W E+ E ++
Sbjct: 174 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--WMPPEA------FMEGIFTSK 225
Query: 867 -DVYGFGEIILEILTNGR-----LTNA--------GSSLQNKPIDGLLGEMYNENEVGSS 912
D + FG ++ EI + G +N G + P G +Y
Sbjct: 226 TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD-PP-KNCPGPVYR------- 276
Query: 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 947
+ C + P DRP+ L+ +
Sbjct: 277 ------------IMTQCWQHQPEDRPNFAIILERI 299
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 54/273 (19%), Positives = 101/273 (36%), Gaps = 73/273 (26%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
V++K + A+ RI+ ++E + +++RLLG ++ + + G+
Sbjct: 56 TRVAIKTVNEAASMRERIEFLNEASV-MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 114
Query: 773 LSEKIRTKRDWAAKY------------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820
L +R+ R A ++ +A G+ +L+ + + + H DL A N +
Sbjct: 115 LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--V-HRDLAARNCMV 171
Query: 821 DENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMYM---DV 868
E+ + +FG Y + G P + W ES +K+ ++ DV
Sbjct: 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--WMSPES------LKDGVFTTYSDV 223
Query: 869 YGFGEIILEILTNGR-----LTN--------AGSSLQNKPIDGLLGEMYNENEVGSSSSL 915
+ FG ++ EI T L+N G L KP D ++
Sbjct: 224 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD-KP-DNCPDMLFE---------- 271
Query: 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948
L+ C + P RPS E + +
Sbjct: 272 -----LMRM----CWQYNPKMRPSFLEIISSIK 295
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 39/272 (14%), Positives = 77/272 (28%), Gaps = 61/272 (22%)
Query: 714 TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCY---------NRHQA 761
++K+I R K++ E + + + H ++R
Sbjct: 29 DDCNYAIKRIRLPNRELAREKVMRE-VKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPK 87
Query: 762 YLLY---DYLPNGNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 813
LY NL + + + + + I L +A + FLH + H DL
Sbjct: 88 VYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDL 144
Query: 814 KASNIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEM-----YM- 866
K SNI F + + +FG + Q + + A YM
Sbjct: 145 KPSNIFFTMDDVVKVGDFGLVTAMDQDEE------EQTVLTPMPAYARHTGQVGTKLYMS 198
Query: 867 -------------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913
D++ G I+ E+L + ++ +
Sbjct: 199 PEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQ----KYP 254
Query: 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
++ +P +RP ++
Sbjct: 255 CEYVMVQ-------DMLSPSPMERPEAINIIE 279
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 3e-07
Identities = 48/275 (17%), Positives = 93/275 (33%), Gaps = 73/275 (26%)
Query: 713 PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
P+ + V+VK + + + + E + I H+N++R +G ++L + +
Sbjct: 99 PSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIVRCIGVSLQSLPRFILLELMA 157
Query: 770 NGNLSEKIRTKRDWAAKY---------KIVLGVARGLCFLHHDCYPAIPHGDLKASNI-- 818
G+L +R R ++ + +A G +L + + I H D+ A N
Sbjct: 158 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF--I-HRDIAARNCLL 214
Query: 819 -VFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMYM-- 866
+ +FG Y + P K W E+ E ++
Sbjct: 215 TCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK--WMPPEA------FMEGIFTSK 266
Query: 867 -DVYGFGEIILEILTNGR-----LTN--------AGSSLQNKPIDGLLGEMYNENEVGSS 912
D + FG ++ EI + G +N +G + P G +Y
Sbjct: 267 TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD-PP-KNCPGPVYR------- 317
Query: 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 947
+ C + P DRP+ L+ +
Sbjct: 318 ------------IMTQCWQHQPEDRPNFAIILERI 340
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 4e-07
Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 43/148 (29%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRIGT-------------VRHKNLIRLLGFCYNR 758
V VK I+ + K++ + V H N+I++L N+
Sbjct: 46 KEKNKEVVVKFIK----KEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101
Query: 759 HQAYL----------LYDYL-PNGNLSEKIRTKRDWAAKY--KIVLGVARGLCFLHHDCY 805
L L+ ++ + L E + A+ ++V V +L
Sbjct: 102 GFFQLVMEKHGSGLDLFAFIDRHPRLDEPL------ASYIFRQLVSAVG----YLRLKD- 150
Query: 806 PAIPHGDLKASNIVFDENMEPHLAEFGF 833
I H D+K NIV E+ L +FG
Sbjct: 151 --IIHRDIKDENIVIAEDFTIKLIDFGS 176
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 4e-07
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 31/187 (16%)
Query: 716 ITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
+ V++K ++ G T K +F+ G H N+IRL G ++ +Y+ NG
Sbjct: 74 VPVAIKTLKAGYTE-KQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGA 132
Query: 773 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
L + +R K + ++V G+A G+ +L + Y + H DL A NI+ + N+ ++
Sbjct: 133 LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY--V-HRDLAARNILVNSNLVCKVS 189
Query: 830 EFGF-------KYLTQLADGS-FPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIIL 876
+FG T G P + WT E+ +F +A DV+ FG ++
Sbjct: 190 DFGLSRVLEDDPEATYTTSGGKIPIR--WTAPEAISYRKFTSA------SDVWSFGIVMW 241
Query: 877 EILTNGR 883
E++T G
Sbjct: 242 EVMTYGE 248
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 4e-07
Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 10/97 (10%)
Query: 519 NNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFG 578
I + + + ID ++N+ I + + L L L +++N +
Sbjct: 28 GYKIPVIENLGATLDQFDAIDFSDNE-IRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQ 85
Query: 579 SCSSLTVLNVSFNDIS--------GSIPSGKVLRLMG 607
+ LT L ++ N + S+ S L ++
Sbjct: 86 ALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILR 122
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 8e-07
Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGP-IPESFADLKNLRLLS 323
L +L++L + N++ + L L L++N L + A LK+L L
Sbjct: 60 FPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLC 119
Query: 324 LMYN---EMSGTVPESLVQLPSLEIL 346
++ N + ++P + +L
Sbjct: 120 ILRNPVTNKKHYRLYVIYKVPQVRVL 145
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 1e-06
Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
Query: 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323
+ +N + L L ++ + + + ++D SDN + + + F L+ L+ L
Sbjct: 14 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KL-DGFPLLRRLKTLL 70
Query: 324 LMYNEMSGTVPESLVQLPSLEILFIWNNYFS--GSLPENLGRNSKLRWVDVSTN 375
+ N + LP L L + NN G L + L L ++ + N
Sbjct: 71 VNNNRICRIGEGLDQALPDLTELILTNNSLVELGDL-DPLASLKSLTYLCILRN 123
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 5e-07
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 267 NLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPE-SFADLKNLRLLSLM 325
L L L L RNQL G P F + ++ L L +N++ I F L L+ L+L
Sbjct: 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE-ISNKMFLGLHQLKTLNLY 110
Query: 326 YNEMSGTVPE-SLVQLPSLEILFIWNN 351
N++S V S L SL L + +N
Sbjct: 111 DNQIS-CVMPGSFEHLNSLTSLNLASN 136
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 5e-07
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-QAYLLYDYLPNG 771
I ++K + + E + + + H N++ L+G ++L Y+ +G
Sbjct: 50 IQCAIKSLSRITEMQQVEAFLREGLL-MRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHG 108
Query: 772 NLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828
+L + IR+ + ++ L VARG+ +L + + H DL A N + DE+ +
Sbjct: 109 DLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF--V-HRDLAARNCMLDESFTVKV 165
Query: 829 AEFGFK--------YLTQLADGS-FPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEI 874
A+FG Y Q + P K WT ES F DV+ FG +
Sbjct: 166 ADFGLARDILDREYYSVQQHRHARLPVK--WTALESLQTYRFTTK------SDVWSFGVL 217
Query: 875 ILEILTNGR 883
+ E+LT G
Sbjct: 218 LWELLTRGA 226
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 6e-07
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 57/211 (27%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
I V+VK ++ A R ++SE +T++G H+N++ LLG C YL+++Y
Sbjct: 76 IQVAVKMLKEKADSSEREALMSELKMMTQLG--SHENIVNLLGACTLSGPIYLIFEYCCY 133
Query: 771 GNLSEKIRTKRDWAAKYKIVLG-------------------------VARGLCFLHHDCY 805
G+L +R+KR+ ++ +I VA+G+ FL
Sbjct: 134 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 193
Query: 806 PAIPHGDLKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEF 856
+ H DL A N++ + +FG + P K W ES
Sbjct: 194 --V-HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK--WMAPES--- 245
Query: 857 YNAMKEEMYM---DVYGFGEIIL-EILTNGR 883
+ E +Y DV+ +G I+L EI + G
Sbjct: 246 ---LFEGIYTIKSDVWSYG-ILLWEIFSLGV 272
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 6e-07
Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 35/190 (18%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCY-NRHQAYLLYDYLPNG 771
I +VK + + ++E I + H N++ LLG C + ++ Y+ +G
Sbjct: 118 IHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 176
Query: 772 NLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828
+L IR + ++ L VA+G+ FL + + H DL A N + DE +
Sbjct: 177 DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF--V-HRDLAARNCMLDEKFTVKV 233
Query: 829 AEFG----------FKYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGE 873
A+FG + P K W ES +F DV+ FG
Sbjct: 234 ADFGLARDMYDKEFDSVHNK-TGAKLPVK--WMALESLQTQKFTTK------SDVWSFGV 284
Query: 874 IILEILTNGR 883
++ E++T G
Sbjct: 285 LLWELMTRGA 294
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 9e-07
Identities = 70/285 (24%), Positives = 106/285 (37%), Gaps = 84/285 (29%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQ-AYLLYDYLP 769
TV+VK ++ GAT ++SE + IG H N++ LLG C ++ ++
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 770 NGNLSEKIRTKRDWAAKYKIVLG------------------VARGLCFLHHDCYPAIPHG 811
GNLS +R+KR+ YK+ VA+G+ FL I H
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC--I-HR 172
Query: 812 DLKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKE 862
DL A NI+ E + +FG + D P K W E+ + +
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK--WMAPET------IFD 224
Query: 863 EMYM---DVYGFGEIILEILTNG--------------RLTNAGSSLQNKPIDGLLGEMYN 905
+Y DV+ FG ++ EI + G R G+ ++ P D EMY
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR-AP-DYTTPEMYQ 282
Query: 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950
L C PS RP+ E ++ L L
Sbjct: 283 -------------------TMLDCWHGEPSQRPTFSELVEHLGNL 308
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 9e-07
Identities = 54/260 (20%), Positives = 97/260 (37%), Gaps = 48/260 (18%)
Query: 714 TGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA--YLLYDY 767
G + K++++G A + +VSE + + ++H N++R +R Y++ +Y
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSE-VNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88
Query: 768 LPNGNLSEKIRTKRDWAAKY------KIVLGVARGLCFLH--HDCYPAIPHGDLKASNIV 819
G+L+ I +++ + L H D + H DLK +N+
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148
Query: 820 FDENMEPHLAEFGF-KYLTQLADGSFPAKIAWTESGE-FYNA---MKEEMY---MDVYGF 871
D L +FG + L A T G +Y + M Y D++
Sbjct: 149 LDGKQNVKLGDFGLARILNHDTS------FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 872 GEIILEILTNGRLTNAGS--SLQNKPIDGL---LGEMYNENEVGSSSSLQDEIKLVLDVA 926
G ++ E+ A S L K +G + Y S L + I +L++
Sbjct: 203 GCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY-------SDELNEIITRMLNL- 254
Query: 927 LLCTRSTPSDRPSMEEALKL 946
RPS+EE L+
Sbjct: 255 ------KDYHRPSVEEILEN 268
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 9e-07
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCY-NRHQAYLLYDYLPNG 771
I +VK + + ++E I + H N++ LLG C + ++ Y+ +G
Sbjct: 54 IHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 112
Query: 772 NLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828
+L IR + ++ L VA+G+ +L + + H DL A N + DE +
Sbjct: 113 DLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF--V-HRDLAARNCMLDEKFTVKV 169
Query: 829 AEFG 832
A+FG
Sbjct: 170 ADFG 173
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 1e-06
Identities = 43/328 (13%), Positives = 100/328 (30%), Gaps = 41/328 (12%)
Query: 293 TTLKSLDLSDNRLSGPIPESFADL----KNLRLLSLMYNEMSGTVPESLVQL----PSLE 344
+K+L + ++ S + +L +L +L+ E + P+ L + SL
Sbjct: 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLV 223
Query: 345 ILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG- 403
+ + ++ L + L + N + +P + KL ++ G
Sbjct: 224 SVKV-GDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP 282
Query: 404 -SLSPSLSNCSSLVRLRLEDNSFSGEIPLK-FSQLPDINYIDLSRNGFTGGIPTDINQAS 461
+ + + +L L E + P++ ++ G+
Sbjct: 283 NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCK 342
Query: 462 KLEYFNVSNNPKLGGMIPAQTW-----------SLPSLQNFSASACNITGNLPPFKSCKS 510
+L+ + GM + L+ + +IT +S +S
Sbjct: 343 QLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITN-----ESLES 397
Query: 511 ISVIESHMNNLSGTIPESVSNCVELERI-DLANNKLIGSIPEVLARLPVLGVLDLSHNS- 568
I ++ + + ERI DL + + S+ L L
Sbjct: 398 IGTYLKNLCDFR------LVLLDREERITDLPLDNGVRSL---LIGCKKLRRFAFYLRQG 448
Query: 569 -LSGQIPAKFGS-CSSLTVLNVSFNDIS 594
L+ + G ++ + + + S
Sbjct: 449 GLTDLGLSYIGQYSPNVRWMLLGYVGES 476
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 2e-05
Identities = 40/261 (15%), Positives = 83/261 (31%), Gaps = 22/261 (8%)
Query: 408 SLSNCSSLVRLRLEDNSFSGEIPLK--FSQLPDINYIDLSRNGFTGGIPTDINQASK--- 462
+ + L L+L+ S L + I + + + F+ +++ ++
Sbjct: 133 AKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNT 192
Query: 463 -LEYFNVS--NNPKLGGM-IPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHM 518
LE N K+ + + SL + I + FK+ ++
Sbjct: 193 SLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGS 252
Query: 519 NNLSGTIPESVSNCVELERIDLANNKLIG--SIPEVLARLPVLGVLDLSHNSLSG-QIPA 575
N +PE N V ++ +G +P + + LDL + L
Sbjct: 253 LNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCT 312
Query: 576 KFGSCSSLTVLNV-------SFNDISGSIPSGKVLRLMGSSAYAGNPKLCGAPLQPCHAS 628
C +L VL ++ K LR+ + G G
Sbjct: 313 LIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEG---LVSQRG 369
Query: 629 VAILGKGTGKLKFVLLLCAGI 649
+ L +G +L+++ + + I
Sbjct: 370 LIALAQGCQELEYMAVYVSDI 390
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 1e-06
Identities = 35/186 (18%), Positives = 73/186 (39%), Gaps = 32/186 (17%)
Query: 716 ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
+ V++K + + + +F+ H ++++L+G + +++ + G
Sbjct: 44 LAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 101
Query: 773 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
L ++ ++ ++ ++ L +L + + H D+ A N++ N L
Sbjct: 102 LRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF--V-HRDIAARNVLVSSNDCVKLG 158
Query: 830 EFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIILE 877
+FG Y + G P K W ES F +A DV+ FG + E
Sbjct: 159 DFGLSRYMEDSTYYKA-SKGKLPIK--WMAPESINFRRFTSA------SDVWMFGVCMWE 209
Query: 878 ILTNGR 883
IL +G
Sbjct: 210 ILMHGV 215
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 1e-06
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 23/134 (17%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITR-IGT---VRHKNLIRLLGFCYNRHQAYLLYDY 767
T V+VK IE R + E + R I +RH N++R ++ +Y
Sbjct: 42 KLTKELVAVKYIE----RGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97
Query: 768 LPNGNLSEKI----RTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
G L E+I R D A + +++ GV+ + H I H DLK N + D
Sbjct: 98 ASGGELYERICNAGRFSEDEARFFFQQLLSGVS----YCHSMQ---ICHRDLKLENTLLD 150
Query: 822 ENMEPHL--AEFGF 833
+ P L +FG+
Sbjct: 151 GSPAPRLKICDFGY 164
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 1e-06
Identities = 25/131 (19%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 708 CKAV-LPTGITVSVKKIE-WGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765
A+ + TG V+++++ + +++ I + ++ N++ L + +++
Sbjct: 37 YTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96
Query: 766 DYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
+YL G+L++ + A + + L FLH + + H D+K+ NI+
Sbjct: 97 EYLAGGSLTDVVTETCMDEGQIAA--VCRECLQALEFLHSN---QVIHRDIKSDNILLGM 151
Query: 823 NMEPHLAEFGF 833
+ L +FGF
Sbjct: 152 DGSVKLTDFGF 162
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 50.8 bits (121), Expect = 1e-06
Identities = 35/220 (15%), Positives = 59/220 (26%), Gaps = 29/220 (13%)
Query: 744 RHKNLIRLL-GFCYNRHQAYLLYDYLPNGNLSEKI---------RTKRDWAAKYKIVLGV 793
+L G YLL + +L R A + + +
Sbjct: 144 SQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQL 203
Query: 794 ARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF--KYLTQLADGSFPAKIAWT 851
R L + HG N+ + L + K T+ S P
Sbjct: 204 IRLAANLQSKG---LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVP---VTY 257
Query: 852 ESGEFYNAMKEEMY---MDVYGFGEIILEILTNGRL---TNAGSSLQNKPIDGLLGEMYN 905
EF NA + ++ + G I + L + L +
Sbjct: 258 APREFLNA-STATFTHALNAWQLGLSIYRVWC-LFLPFGLVTPGIKGSWKRPSLRVPGTD 315
Query: 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
GS + L D +K ++ L R EA++
Sbjct: 316 SLAFGSCTPLPDFVKTLIG-RFLNFD--RRRRLLPLEAME 352
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 26/185 (14%)
Query: 716 ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
V +K ++ F + + HK+L+ G C + L+ +++ G+
Sbjct: 41 TEVLLKVLDKAHRNYSE--SFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGS 98
Query: 773 LSEKIRTKRD---WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI-VFDENMEPH- 827
L ++ ++ K ++ +A + FL + I HG++ A NI + E
Sbjct: 99 LDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTL--I-HGNVCAKNILLIREEDRKTG 155
Query: 828 ------LAEFGF-KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMYMDVYGFGEIILEI 878
L++ G + I W E E + D + FG + EI
Sbjct: 156 NPPFIKLSDPGISITVLPKDILQER--IPWVPPECIENPKNLNLA--TDKWSFGTTLWEI 211
Query: 879 LTNGR 883
+ G
Sbjct: 212 CSGGD 216
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 2e-06
Identities = 58/390 (14%), Positives = 118/390 (30%), Gaps = 44/390 (11%)
Query: 247 VQYLDIAGANLSGSIPKELS-NLTKLESLFLFRNQLAGQVPWE--FSRVTTLKSLDLSDN 303
++ + + ++ + ++ + + L L + + LK LDL ++
Sbjct: 107 LEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRES 166
Query: 304 RLSGPIPESFADL----KNLRLLSL--MYNEMSGTVPESLVQ-LPSLEILFIWNNYFSGS 356
+ + +L L++ + +E+S + E LV P+L+ L +
Sbjct: 167 DVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK 226
Query: 357 LPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV--------LFKLILFSNNFTGSLSPS 408
L L R +L ++ T + + PD+ SG L L F + L
Sbjct: 227 LATLLQRAPQLE--ELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAV 284
Query: 409 LSNCSSLVRLRLEDNSFSGE-IPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFN 467
S CS L L L + + Q P + + + G+ + L
Sbjct: 285 YSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELR 344
Query: 468 VSNNPKLGGMIPAQ---------TWSLPSLQNFSASACNITG--------NLPPFKS--- 507
V + + P L++ +T N P
Sbjct: 345 VFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRL 404
Query: 508 --CKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLS 565
+ + + L V +C +L R+ L+ + + +L ++
Sbjct: 405 CIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVA 464
Query: 566 HNSLSGQ-IPAKFGSCSSLTVLNVSFNDIS 594
S + C SL L +
Sbjct: 465 FAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 697 EEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC 755
E+ + KA+ TG V++K++ + +I+ E I+ + ++++ G
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKE-ISIMQQCDSPHVVKYYGSY 93
Query: 756 YNRHQAYLLYDYLPNGNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPH 810
+ +++ +Y G++S+ IR + D A I+ +GL +LH H
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT--ILQSTLKGLEYLHFM---RKIH 148
Query: 811 GDLKASNIVFDENMEPHLAEFGF 833
D+KA NI+ + LA+FG
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGV 171
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 11/131 (8%)
Query: 709 KAV-LPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765
K + T V++K I E I+ + + IT + + + G + +++
Sbjct: 40 KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99
Query: 766 DYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
+YL G+ + + A I+ + +GL +LH + H D+KA+N++ E
Sbjct: 100 EYLGGGSALDLLEPGPLDETQIAT--ILREILKGLDYLHSE---KKIHRDIKAANVLLSE 154
Query: 823 NMEPHLAEFGF 833
+ E LA+FG
Sbjct: 155 HGEVKLADFGV 165
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 3e-06
Identities = 26/136 (19%), Positives = 55/136 (40%), Gaps = 15/136 (11%)
Query: 708 CKAV-LPTGITVSVKKI---EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763
A PTG V+V++I + + + H N++ ++ ++
Sbjct: 44 NLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103
Query: 764 LYDYLPNGNLSEKIRTKR------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASN 817
+ ++ G+ + I T A I+ GV + L ++HH Y + H +KAS+
Sbjct: 104 VTSFMAYGSAKDLICTHFMDGMNELAIAY--ILQGVLKALDYIHHMGY--V-HRSVKASH 158
Query: 818 IVFDENMEPHLAEFGF 833
I+ + + +L+
Sbjct: 159 ILISVDGKVYLSGLRS 174
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 3e-06
Identities = 26/137 (18%), Positives = 54/137 (39%), Gaps = 13/137 (9%)
Query: 714 TGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
G +K+I R + E + + ++H N+++ Y++ DY
Sbjct: 48 DGRQYVIKEINISRMSSKEREESRRE-VAVLANMKHPNIVQYRESFEENGSLYIVMDYCE 106
Query: 770 NGNLSEKIRTKRDWAAKYKIVLG----VARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
G+L ++I ++ + +L + L +H I H D+K+ NI ++
Sbjct: 107 GGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGT 163
Query: 826 PHLAEFGF-KYLTQLAD 841
L +FG + L +
Sbjct: 164 VQLGDFGIARVLNSTVE 180
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 3e-06
Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 708 CKAV-LPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764
C A +G V+VK + R + +E + + +H N++ + + ++L
Sbjct: 62 CLAREKHSGRQVAVKMMDLRKQQRRELLFNE-VVIMRDYQHFNVVEMYKSYLVGEELWVL 120
Query: 765 YDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
++L G L++ + R + A + V + L +LH + H D+K+ +I+
Sbjct: 121 MEFLQGGALTDIVSQVRLNEEQIAT--VCEAVLQALAYLHAQ---GVIHRDIKSDSILLT 175
Query: 822 ENMEPHLAEFGF 833
+ L++FGF
Sbjct: 176 LDGRVKLSDFGF 187
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 40/267 (14%), Positives = 78/267 (29%), Gaps = 57/267 (21%)
Query: 714 TGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
G ++K+ + + E +H +++R + +Y
Sbjct: 35 DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCN 94
Query: 770 NGNLSEKIRTKRDWAAKY------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 823
G+L++ I + + ++L V RGL ++H ++ H D+K SNI
Sbjct: 95 GGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRT 151
Query: 824 MEPHLAEFGFKYLTQLADGSFPAKIA-WTESGEFYNAMKEE---MYM------------- 866
P+ A A KI + EE ++
Sbjct: 152 SIPNAASEE-GDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLP 210
Query: 867 --DVYGFGEIILEILTNGRLTNAGSSLQN------KPIDGLLGEMYNENEVGSSSSLQDE 918
D++ ++ L G I +L S +
Sbjct: 211 KADIFALALTVVCAAGAEPLPRNGDQWHEIRQGRLPRIPQVL-----------SQEFTEL 259
Query: 919 IKLVLDVALLCTRSTPSDRPSMEEALK 945
+K+++ P RPS +K
Sbjct: 260 LKVMIHPD-------PERRPSAMALVK 279
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 4e-06
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 19/133 (14%)
Query: 712 LPTGITVSVK-----KIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766
TG V+VK KI KI E I + RH ++I+L +++ +
Sbjct: 33 QLTGHKVAVKILNRQKIRSLDVVGKIKRE-IQNLKLFRHPHIIKLYQVISTPTDFFMVME 91
Query: 767 YLPNGNLSEKI----RTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820
Y+ G L + I R + A + +I+ V + H + H DLK N++
Sbjct: 92 YVSGGELFDYICKHGRVEEMEARRLFQQILSAVD----YCHRHM---VVHRDLKPENVLL 144
Query: 821 DENMEPHLAEFGF 833
D +M +A+FG
Sbjct: 145 DAHMNAKIADFGL 157
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 4e-06
Identities = 38/188 (20%), Positives = 73/188 (38%), Gaps = 36/188 (19%)
Query: 716 ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
I V+VK + T + +F++ I + H ++++L+G +++ + P G
Sbjct: 41 INVAVKTCKKDCT-LDNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGE 98
Query: 773 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
L + ++ +V L + + + +L + H D+ NI+ L
Sbjct: 99 LGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC--V-HRDIAVRNILVASPECVKLG 155
Query: 830 EFGFKYLTQLADGS---------FPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEII 875
+FG L++ + P I W ES F A DV+ F +
Sbjct: 156 DFG---LSRYIEDEDYYKASVTRLP--IKWMSPESINFRRFTTA------SDVWMFAVCM 204
Query: 876 LEILTNGR 883
EIL+ G+
Sbjct: 205 WEILSFGK 212
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 4e-06
Identities = 38/204 (18%), Positives = 77/204 (37%), Gaps = 51/204 (25%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
V++K ++ A R + E ++H N++ LLG +++ Y +G+
Sbjct: 40 QAVAIKTLKDKAEGPLREEFRHE-AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 98
Query: 773 LSEKIRTKRDWAAKY------------------KIVLGVARGLCFL--HHDCYPAIPHGD 812
L E + + + +V +A G+ +L HH + H D
Sbjct: 99 LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKD 153
Query: 813 LKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAM 860
L N++ + + +++ G Y L + P I W E+ G+F
Sbjct: 154 LATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP--IRWMAPEAIMYGKFSID- 210
Query: 861 KEEMYMDVYGFGEIIL-EILTNGR 883
D++ +G ++L E+ + G
Sbjct: 211 -----SDIWSYG-VVLWEVFSYGL 228
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 4e-06
Identities = 46/225 (20%), Positives = 76/225 (33%), Gaps = 40/225 (17%)
Query: 744 RHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDW---AAKYKIVLGVARGLCFL 800
H N+IR +R Y+ + L E + K ++ GL L
Sbjct: 76 EHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL 134
Query: 801 HHDCYPAIPHGDLKASNIVFDE-----NMEPHLAEFGFKYLTQLADGSFPAKIAWTESG- 854
H I H DLK NI+ ++ +++FG +LA G G
Sbjct: 135 HSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC--KKLAVGRHSFSRRSGVPGT 189
Query: 855 EFYNA---MKEEMYM------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEM-- 903
E + A + E+ D++ G + +++ G S + I LLG
Sbjct: 190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI--LLGACSL 247
Query: 904 -YNENEVGSSSSLQDEIK--LVLDVALLCTRSTPSDRPSMEEALK 945
E ++ I+ + +D P RPS + LK
Sbjct: 248 DCLHPEKHEDVIARELIEKMIAMD---------PQKRPSAKHVLK 283
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 5e-06
Identities = 51/248 (20%), Positives = 91/248 (36%), Gaps = 77/248 (31%)
Query: 744 RHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKY---------------- 787
+H+++++ G C + ++++Y+ +G+L++ +R A
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 788 --KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-------KYLTQ 838
I +A G+ +L + + H DL N + N+ + +FG Y
Sbjct: 135 MLHIASQIASGMVYLASQHF--V-HRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV 191
Query: 839 LADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIIL-EILTNGR-----LTNA 887
P I W ES +F DV+ FG +IL EI T G+ L+N
Sbjct: 192 GGHTMLP--IRWMPPESIMYRKFTTE------SDVWSFG-VILWEIFTYGKQPWFQLSNT 242
Query: 888 --------GSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS 939
G L+ +P E+Y+ V L C + P R +
Sbjct: 243 EVIECITQGRVLE-RP-RVCPKEVYD-------------------VMLGCWQREPQQRLN 281
Query: 940 MEEALKLL 947
++E K+L
Sbjct: 282 IKEIYKIL 289
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 5e-06
Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 14/120 (11%)
Query: 261 IPKELSNLTKLESLFLFRNQ---LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317
+ LS L + L L N ++ S + L+ L L N + I A
Sbjct: 40 MDATLSTLKACKHLALSTNNIEKISS-----LSGMENLRILSLGRNLIKK-IENLDAVAD 93
Query: 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE--NLGRNSKLRWVDVSTN 375
L L + YN+++ + +L +L +L++ NN + + E L KL + ++ N
Sbjct: 94 TLEELWISYNQIA--SLSGIEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGN 150
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 22/122 (18%)
Query: 497 NITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARL 556
+ L K+CK +++ NN+ I S+S L + L N I I + A
Sbjct: 39 KMDATLSTLKACKHLAL---STNNIE-KI-SSLSGMENLRILSLGRNL-IKKIENLDAVA 92
Query: 557 PVLGVLDLSHN---SLSGQIPAKFGSCSSLTVLNVSFNDIS--------GSIPSGKVLRL 605
L L +S+N SLSG +L VL +S N I+ ++ + L L
Sbjct: 93 DTLEELWISYNQIASLSG-----IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLL 147
Query: 606 MG 607
G
Sbjct: 148 AG 149
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 10/139 (7%)
Query: 311 ESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWV 370
+ + + L M + + +L L + + L + N + +L LR +
Sbjct: 20 VVATEAEKVEL-HGMIPPIEK-MDATLSTLKACKHLALSTNNIE-KI-SSLSGMENLRIL 75
Query: 371 DVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFS--GE 428
+ N I L +L + N SLS + +L L + +N + GE
Sbjct: 76 SLGRNLIK-KIENLDAVADTLEELWISYNQIA-SLSG-IEKLVNLRVLYMSNNKITNWGE 132
Query: 429 IPLKFSQLPDINYIDLSRN 447
I K + L + + L+ N
Sbjct: 133 I-DKLAALDKLEDLLLAGN 150
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 3e-04
Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 63/208 (30%)
Query: 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
E V+L+ + L + L +S NN I+ + +L
Sbjct: 26 EKVELHGMIPPIEK-MDATLSTLKACKHLALSTNN--------IEKISSL---------- 66
Query: 162 SGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLK 221
S +E+L++L+L + I + +LE L ++ N + + + L
Sbjct: 67 --------SGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIAS--LSGIEKLV 115
Query: 222 TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 281
+ + + N ++ N E+ L + L KLE L L N L
Sbjct: 116 NLRVLYMSNN--------KITNWGEIDKL---------------AALDKLEDLLLAGNPL 152
Query: 282 AGQVPWE----------FSRVTTLKSLD 299
R+ LK LD
Sbjct: 153 YNDYKENNATSEYRIEVVKRLPNLKKLD 180
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 6e-06
Identities = 38/251 (15%), Positives = 68/251 (27%), Gaps = 54/251 (21%)
Query: 724 EWGATRIKIVSEFITRIGTVRHKNLIRL--LGFCYNRH--QAYLLYDYLPNGNLSEKIRT 779
+ K+ FI V+ ++ + + NL
Sbjct: 138 IKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEV 197
Query: 780 KRD---------WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830
A+ ++ L V R L LHH + H L+ +IV D+ L
Sbjct: 198 LLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTG 254
Query: 831 FGFKYLTQLADGSFPAKIAWTESGEFYNA---MKEEMYM-------------DVYGFGEI 874
F + DG+ A + G + E M D + G
Sbjct: 255 FEHL----VRDGA----SAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306
Query: 875 ILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTP 934
I I L N + G ++ + ++ ++ L
Sbjct: 307 IYWIWC-ADLPNTDDAAL-----GGSEWIFRSCK-NIPQPVRALLEGFLRY-------PK 352
Query: 935 SDRPSMEEALK 945
DR +A++
Sbjct: 353 EDRLLPLQAME 363
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 6e-06
Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 20/128 (15%)
Query: 714 TGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
TG +VKK+ R + + ++ L G + + L
Sbjct: 82 TGFQCAVKKVRLEVFRVEELVACAGL-------SSPRIVPLYGAVREGPWVNIFMELLEG 134
Query: 771 GNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-ME 825
G+L + I+ D A Y + GL +LH I HGD+KA N++ +
Sbjct: 135 GSLGQLIKQMGCLPEDRALYY--LGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSR 189
Query: 826 PHLAEFGF 833
L +FG
Sbjct: 190 AALCDFGH 197
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 6e-06
Identities = 51/280 (18%), Positives = 100/280 (35%), Gaps = 79/280 (28%)
Query: 716 ITVSVKKIEWGATRIKI--VSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773
+ V+VK ++ + + E + ++H++++R G C ++++Y+ +G+L
Sbjct: 72 MLVAVKALKEASESARQDFQREAEL-LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 130
Query: 774 SEKIRTKRDWAAKY-----------------KIVLGVARGLCFLHHDCYPAIPHGDLKAS 816
+ +R+ A + VA G+ +L + + H DL
Sbjct: 131 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF--V-HRDLATR 187
Query: 817 NIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEM 864
N + + + + +FG Y P + W ES +F
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR--WMPPESILYRKFTTE----- 240
Query: 865 YMDVYGFGEIIL-EILTNGR-----LTN--------AGSSLQNKPIDGLLGEMYNENEVG 910
DV+ FG ++L EI T G+ L+N G L+ +P E+Y
Sbjct: 241 -SDVWSFG-VVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE-RP-RACPPEVYA----- 291
Query: 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950
++ C + P R S+++ L L
Sbjct: 292 ----------IMRG----CWQREPQQRHSIKDVHARLQAL 317
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 8e-06
Identities = 61/292 (20%), Positives = 103/292 (35%), Gaps = 93/292 (31%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
TV+VK ++ A+ ++SE + V H ++I+L G C L+ +Y G+
Sbjct: 54 TTVAVKMLKENASPSELRDLLSE-FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGS 112
Query: 773 LSEKIRTKRDWAAKYKIVLG--------------------------VARGLCFL--HHDC 804
L +R R Y G +++G+ +L
Sbjct: 113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-- 170
Query: 805 YPAIPHGDLKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGE 855
+ H DL A NI+ E + +++FG + + G P K W ES
Sbjct: 171 ---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVK--WMAIES-- 223
Query: 856 FYNAMKEEMYM---DVYGFGEIIL-EILTNGR-----LTNA--------GSSLQNKPIDG 898
+ + +Y DV+ FG ++L EI+T G + G ++ +P D
Sbjct: 224 ----LFDHIYTTQSDVWSFG-VLLWEIVTLGGNPYPGIPPERLFNLLKTGHRME-RP-DN 276
Query: 899 LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950
EMY + L C + P RP + K L +
Sbjct: 277 CSEEMY-------------------RLMLQCWKQEPDKRPVFADISKDLEKM 309
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 8e-06
Identities = 58/280 (20%), Positives = 93/280 (33%), Gaps = 68/280 (24%)
Query: 709 KAV-LPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765
A P V++K+I E T + + + I + H N++ + + +L+
Sbjct: 33 AAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92
Query: 766 DYLPNGNLSEKIRTKRDWAAKYKIVLG----------VARGLCFLHHDCYPAIPHGDLKA 815
L G++ + I+ VL V GL +LH + H D+KA
Sbjct: 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKA 149
Query: 816 SNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA----------W-----TESGEFYNAM 860
NI+ E+ +A+FG LA G + W E Y+
Sbjct: 150 GNILLGEDGSVQIADFGVS--AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFK 207
Query: 861 KEEMYMDVYGFGEIILEILTNGR---------------LTNAGSSLQNKPIDGLLGEMYN 905
D++ FG +E L G L N SL+ D + + Y
Sbjct: 208 A-----DIWSFGITAIE-LATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKY- 260
Query: 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
S + I L L P RP+ E L+
Sbjct: 261 ------GKSFRKMISLCLQK-------DPEKRPTAAELLR 287
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 8e-06
Identities = 43/268 (16%), Positives = 86/268 (32%), Gaps = 67/268 (25%)
Query: 714 TGITVSVKKIEWGAT-----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768
G+ V++KK++ R + E I + + H N+I+ ++ ++ +
Sbjct: 56 DGVPVALKKVQIFDLMDAKARADCIKE-IDLLKQLNHPNVIKYYASFIEDNELNIVLELA 114
Query: 769 PNGNLSEKIRTKRDWAAKY------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
G+LS I+ + K + + L +H + H D+K +N+
Sbjct: 115 DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITA 171
Query: 823 NMEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM--------------D 867
L + G ++ + A + G Y YM D
Sbjct: 172 TGVVKLGDLGLGRFFSSKTT------AAHSLVGTPY-------YMSPERIHENGYNFKSD 218
Query: 868 VYGFGEIILEILT-----NGRLTNAGSSLQNKPIDG----LLGEMYNENEVGSSSSLQDE 918
++ G ++ E+ G N SL K L + Y S L+
Sbjct: 219 IWSLGCLLYEMAALQSPFYGDKMNL-YSLCKKIEQCDYPPLPSDHY-------SEELRQL 270
Query: 919 IKLVLDVALLCTRSTPSDRPSMEEALKL 946
+ + ++ P RP + +
Sbjct: 271 VNMCINP-------DPEKRPDVTYVYDV 291
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 9e-06
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 20/142 (14%)
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295
IP S L++ L LT+L L L +NQ+ F ++T L
Sbjct: 25 GIP------SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKL 78
Query: 296 KSLDLSDNRLSGPIPES-FADLKNLRLLSLMYNEMSGTVPESLV-QLPSLEILFIWNN-- 351
L L +N+L +P F L L+ L+L N++ +VP+ + +L SL+ +++ N
Sbjct: 79 TILYLHENKLQS-LPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPW 136
Query: 352 --------YFSGSLPENLGRNS 365
Y S L +N +
Sbjct: 137 DCSCPRIDYLSRWLNKNSQKEQ 158
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 1e-05
Identities = 22/130 (16%), Positives = 51/130 (39%), Gaps = 13/130 (10%)
Query: 713 PTGITVSVKKIEW---GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
P+G ++VK+I + +++ + + + +++ G + ++ + +
Sbjct: 45 PSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM- 103
Query: 770 NGNLSEKIRTKRDWAAKY-------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
+ + + + KI L + L L + I H D+K SNI+ D
Sbjct: 104 STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDR 161
Query: 823 NMEPHLAEFG 832
+ L +FG
Sbjct: 162 SGNIKLCDFG 171
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 1e-05
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 19/133 (14%)
Query: 712 LPTGITVSVK-----KIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766
TG V+VK KI KI E I + RH ++I+L +++ +
Sbjct: 38 ELTGHKVAVKILNRQKIRSLDVVGKIRRE-IQNLKLFRHPHIIKLYQVISTPSDIFMVME 96
Query: 767 YLPNGNLSEKI----RTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820
Y+ G L + I R + + +I+ GV + H + H DLK N++
Sbjct: 97 YVSGGELFDYICKNGRLDEKESRRLFQQILSGVD----YCHRHM---VVHRDLKPENVLL 149
Query: 821 DENMEPHLAEFGF 833
D +M +A+FG
Sbjct: 150 DAHMNAKIADFGL 162
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 268 LTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327
L + L L N+L +T L L L+ N+L F L NL+ L L+ N
Sbjct: 62 LPNVRYLALGGNKL--HDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 328 EMSGTVPESLV-QLPSLEILFIWNNYFSGSLPENL-GRNSKLRWVDVSTNNFNGSIPPDI 385
++ ++P+ + +L +L L + +N SLP+ + + + L +D+S N S+P
Sbjct: 120 QLQ-SLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQ-SLPE-- 174
Query: 386 CSGGVLFKL 394
GV KL
Sbjct: 175 ---GVFDKL 180
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 54/229 (23%), Positives = 86/229 (37%), Gaps = 42/229 (18%)
Query: 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS 164
NL S + + L S+ + + ++ GIQ L N+ L N
Sbjct: 23 KANLKKKSVT-DAVTQN-ELNSIDQIIANNSDIK--SVQGIQYLPNVRYLALGGN----- 73
Query: 165 VPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAEL-GMLKTV 223
+L + +L +L L GN L +P + L +
Sbjct: 74 ------KLHDISA---------------LKELTNLTYLILTGNQLQ-SLPNGVFDKLTNL 111
Query: 224 THMEIGYNFYQ---GNIPWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRN 279
+ + N Q + +L N+ YL++A L S+PK + LT L L L N
Sbjct: 112 KELVLVENQLQSLPDGVFDKLTNL---TYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYN 167
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPE-SFADLKNLRLLSLMYN 327
QL F ++T LK L L N+L +P+ F L +L+ + L N
Sbjct: 168 QLQSLPEGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDN 215
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 47.3 bits (111), Expect = 2e-05
Identities = 24/199 (12%), Positives = 61/199 (30%), Gaps = 25/199 (12%)
Query: 127 LISLDISRNNFSGHFPGGIQS-LRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185
+D S + L + +L+ + ++ +LK L +
Sbjct: 146 WGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLSIGKKPRPNLKSLEIISGGL 205
Query: 186 SGPIPSQFGS--FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGN 243
+ +LE L L + + ++ + + + +
Sbjct: 206 PDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPL---------------FSKDR 250
Query: 244 MSEVQYLDIAGANLSGSIPKELSN---LTKLESLFLFRNQL----AGQVPWEFSRVTTLK 296
+++L I A + + L +LE++ + L A + ++ LK
Sbjct: 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLK 310
Query: 297 SLDLSDNRLSGPIPESFAD 315
+++ N LS + +
Sbjct: 311 FINMKYNYLSDEMKKELQK 329
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 44.6 bits (104), Expect = 1e-04
Identities = 23/177 (12%), Positives = 63/177 (35%), Gaps = 24/177 (13%)
Query: 172 LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM--LKTVTHMEIG 229
L+ + +LN + + +L+ L + L D + ++ L + + +
Sbjct: 168 LDAMPLLNNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVL- 226
Query: 230 YNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP--- 286
+ + +++ S L+ L + + V
Sbjct: 227 ----YVGVEDYGFDGD----MNVFRPLFSKD------RFPNLKWLGIVDAEEQNVVVEMF 272
Query: 287 WEFSRVTTLKSLDLSDNRLSG----PIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
E + L+++D+S L+ + + +K+L+ +++ YN +S + + L +
Sbjct: 273 LESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 44.6 bits (104), Expect = 1e-04
Identities = 11/74 (14%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Query: 528 SVSNCVELERIDLANNKLIGSIPEVLARLPVLG---VLDLSHNSLSG----QIPAKFGSC 580
S L+ + + + + + E+ +L +D+S L+ +
Sbjct: 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKI 306
Query: 581 SSLTVLNVSFNDIS 594
L +N+ +N +S
Sbjct: 307 KHLKFINMKYNYLS 320
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 6e-04
Identities = 32/163 (19%), Positives = 60/163 (36%), Gaps = 21/163 (12%)
Query: 233 YQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEF--S 290
Q ++ L M + L I G N ++ L+SL + L V + S
Sbjct: 160 EQVDLSPVLDAMPLLNNLKIKGTN---NLSIGKKPRPNLKSLEIISGGLPDSVVEDILGS 216
Query: 291 RVTTLKSLDL---SDNRLSGPIPESFADL------KNLRLLSLMYNEMSGTVPESLVQ-- 339
+ L+ L L ++ F L NL+ L ++ E V E ++
Sbjct: 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESD 276
Query: 340 -LPSLEILFIWNNYFSGS----LPENLGRNSKLRWVDVSTNNF 377
LP LE + I + L +++ + L+++++ N
Sbjct: 277 ILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 26/138 (18%), Positives = 56/138 (40%), Gaps = 30/138 (21%)
Query: 712 LPTGITVSVK-----KIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL--- 763
T V++K ++ +++ E I+ + +RH ++I+L +
Sbjct: 31 YKTQQKVALKFISRQLLKKSDMHMRVERE-ISYLKLLRHPHIIKLYDVITTPTDIVMVIE 89
Query: 764 -----LYDYL-PNGNLSEKIRTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKA 815
L+DY+ ++E ++ +I+ + + H I H DLK
Sbjct: 90 YAGGELFDYIVEKKRMTEDE------GRRFFQQIICAIE----YCHRHK---IVHRDLKP 136
Query: 816 SNIVFDENMEPHLAEFGF 833
N++ D+N+ +A+FG
Sbjct: 137 ENLLLDDNLNVKIADFGL 154
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 2e-05
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 18/132 (13%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITR-IGTVR---HKNLIRLLGFCYNRHQAYLLYDYLP 769
TG +VK I + K E + R + ++ H N+++L F ++ YL+ +
Sbjct: 50 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 109
Query: 770 NGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---D 821
G L ++I ++ D AA +I+ V G+ ++H + I H DLK N++
Sbjct: 110 GGELFDEIISRKRFSEVD-AA--RIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 163
Query: 822 ENMEPHLAEFGF 833
++ + +FG
Sbjct: 164 KDANIRIIDFGL 175
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 17/104 (16%)
Query: 744 RHKNLIRLLGFCYNRHQ-------AYLLYDYLPNGNLSEKIRTKRDWAAKY-------KI 789
H N+++ + +LL L G L E ++ + KI
Sbjct: 84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKME--SRGPLSCDTVLKI 141
Query: 790 VLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833
R + +H P I H DLK N++ L +FG
Sbjct: 142 FYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 2e-05
Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 713 PTGITVSVKKIEW---GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
P+G+ ++ K I A R +I+ E + + ++ G Y+ + + +++
Sbjct: 56 PSGLVMARKLIHLEIKPAIRNQIIRE-LQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 114
Query: 770 NGNLSEKIRTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
G+L + ++ + K+ + V +GL +L I H D+K SNI+ + E
Sbjct: 115 GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIK 172
Query: 828 LAEFG 832
L +FG
Sbjct: 173 LCDFG 177
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295
IP ++ YLD+ +L LT L L+L N+L F+++T+L
Sbjct: 25 GIP------AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSL 78
Query: 296 KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV-QLPSLEILFIWNN 351
L+LS N+L F L L+ L+L N++ ++P+ + +L L+ L ++ N
Sbjct: 79 TYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQN 134
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 745 HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCF 799
H N+I+L ++ YL+ ++ G L E+I + D AA I+ + G+C+
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD-AA--NIMKQILSGICY 161
Query: 800 LHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGF 833
LH I H D+K NI+ + + + +FG
Sbjct: 162 LHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGL 195
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 22/127 (17%), Positives = 49/127 (38%), Gaps = 11/127 (8%)
Query: 713 PTGITVSVKKIEW---GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
TG ++VK++ +I+ + + + +++ G ++ + +
Sbjct: 48 KTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMG 107
Query: 770 NGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
K R + K + + + + L +L + H D+K SNI+ DE +
Sbjct: 108 TCAEKLKKRMQGPIPERILGK--MTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQ 163
Query: 826 PHLAEFG 832
L +FG
Sbjct: 164 IKLCDFG 170
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 22/137 (16%)
Query: 709 KAVLPTGITVSVKKIEWGATRIKIVSEFITRIG---TVRHKNL--IRLLGFCYNRHQAYL 763
+ + ++K + + + + I ++ + IRL + Y+
Sbjct: 46 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105
Query: 764 LYDYLPNGNLSEKIRTKR----DWAAKY--KIVLGVARGLCFLH-HDCYPAIPHGDLKAS 816
+ + N +L+ ++ K+ Y ++ V +H H I H DLK +
Sbjct: 106 VMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH----TIHQHG----IVHSDLKPA 156
Query: 817 NIVFDENMEPHLAEFGF 833
N + + M L +FG
Sbjct: 157 NFLIVDGM-LKLIDFGI 172
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 2e-05
Identities = 32/216 (14%), Positives = 62/216 (28%), Gaps = 45/216 (20%)
Query: 755 CYNRHQAYLLYDYLPNGNLSEKIR-----TKRDWAAKYKIVLGVARGLCFLHHDCYPAIP 809
+ Y+ NL + + R+ I + +A + FLH +
Sbjct: 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LM 186
Query: 810 HGDLKASNIVFDENMEPHLAEFGFKYLTQLA-DGSFPAKIAWTESGEFYNAMKEE----- 863
H DLK SNI F + + +FG L + + A
Sbjct: 187 HRDLKPSNIFFTMDDVVKVGDFG------LVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240
Query: 864 MYM--------------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909
+YM D++ G I+ E+L + I + +
Sbjct: 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLY---SFSTQMERVRI-ITDVRNLKFPLLFT 296
Query: 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
++ +P++RP + ++
Sbjct: 297 QKYPQEHMMVQ-------DMLSPSPTERPEATDIIE 325
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 14/134 (10%)
Query: 708 CKAV-LPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764
KA TG + K I + + E I + T H +++LLG Y+ + +++
Sbjct: 36 YKAKNKETGALAAAKVIETKSEEELEDYIVE-IEILATCDHPYIVKLLGAYYHDGKLWIM 94
Query: 765 YDYLPNGNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 819
++ P G + + + + L FLH I H DLKA N++
Sbjct: 95 IEFCPGGAVDAIMLELDRGLTEPQIQV--VCRQMLEALNFLHSK---RIIHRDLKAGNVL 149
Query: 820 FDENMEPHLAEFGF 833
+ LA+FG
Sbjct: 150 MTLEGDIRLADFGV 163
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 3e-05
Identities = 65/362 (17%), Positives = 107/362 (29%), Gaps = 84/362 (23%)
Query: 72 KNNTIVVGINLS--------MKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF- 122
V ++LS L A P + LNLS NS + E+
Sbjct: 19 SIPHGVTSLDLSLNNLYSISTVELIQAFANTPAS-----VTSLNLSGNSLGFKNSDELVQ 73
Query: 123 ----NLTSLISLDISRNNFSGHFPGGIQSL--------RNLLVLDAFSNSFSGSVPAEIS 170
++ SL++S N S L + VLD N FS +E
Sbjct: 74 ILAAIPANVTSLNLSGNFLS---YKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFK 130
Query: 171 QL-----EHLKVLNLAGSYFSGPIPSQFGSF-----KSLEFLHLAGNLLNDQIPAELG-M 219
Q + LNL G+ + ++ L+L GN L + AEL
Sbjct: 131 QAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKF 190
Query: 220 LK----TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLF 275
L +VT +++ N LG I S + SL
Sbjct: 191 LASIPASVTSLDLSAN--------LLGL---------KSYAELAYIFS--SIPNHVVSLN 231
Query: 276 LFRNQLAGQVPWEFSRV----TTLKSLDLSDNRLSGPIPESFADL-------KNLRLLSL 324
L N L G + L+++ L + + E L + + L+
Sbjct: 232 LCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDK 291
Query: 325 MYNEMSGTVPESLVQL-----PSLEILFIWNNYFS-----GSLPENLGRNSKLRWVDVST 374
E+ + + L ++ + N + E+L +LR +
Sbjct: 292 NGKEIHPSHSIPISNLIRELSGKADVPSLLNQCLIFAQKHQTNIEDLNIPDELRESIQTC 351
Query: 375 NN 376
Sbjct: 352 KP 353
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 47/333 (14%), Positives = 100/333 (30%), Gaps = 88/333 (26%)
Query: 293 TTLKSLDLSDNRLSGPIPESFADL-----KNLRLLSLMYNEMSGTVPESLVQLPSLEILF 347
+ SLDLS N L ++ L+L N + ++ +L
Sbjct: 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLG---FKNSDEL------- 71
Query: 348 IWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-----GVLFKLILFSNNFT 402
L + + +++S N + ++ + L L N+F+
Sbjct: 72 ------VQILAAI---PANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFS 122
Query: 403 GS----LSPSLSNC-SSLVRLRLEDNSFSGEIPLKFSQ-LPDIN----YIDLSRNGFTGG 452
+ SN +S+ L L N + + Q L I ++L N
Sbjct: 123 SKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASK 182
Query: 453 IPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSIS 512
++ A L S+ + SA + KS ++
Sbjct: 183 NCAEL--AKFLASIP------------------ASVTSLDLSANLLG-----LKSYAELA 217
Query: 513 VIESHMNNLSGTIPESVSNCVELERIDLANNKL----IGSIPEVLARLPVLGVLDLSHNS 568
I S + N + ++L N L + ++ + L L + L ++
Sbjct: 218 YIFSSIPNH-------------VVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDI 264
Query: 569 LSGQIPAK-------FGSCSSLTVLNVSFNDIS 594
+ + F + + +++ + +I
Sbjct: 265 VKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 3e-05
Identities = 23/209 (11%), Positives = 60/209 (28%), Gaps = 33/209 (15%)
Query: 739 RIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLC 798
R+ + + R+L + R ++ +++ G+L E T + + +A
Sbjct: 84 RLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAAD 143
Query: 799 FLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYN 858
H + S + + + LA + D +
Sbjct: 144 AAHRA---GVALSIDHPSRVRVSIDGDVVLAYPAT-----MPDANPQD------------ 183
Query: 859 AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918
D+ G G + +L R + +++ + + + + + +
Sbjct: 184 --------DIRGIGASLYALLV-NRWPLPEAGVRS-GLAPAERDT--AGQPIEPADIDRD 231
Query: 919 IKLVLD-VALLCTRSTPSDRPSMEEALKL 946
I + VA + R + +
Sbjct: 232 IPFQISAVAARSVQGDGGIRSASTLLNLM 260
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 47/250 (18%), Positives = 77/250 (30%), Gaps = 44/250 (17%)
Query: 714 TGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
G +VK+ R + ++E + +H +RL YL +
Sbjct: 81 DGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC- 139
Query: 770 NGNLSEKIRTKRDW---AAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826
+L + A + + L LH + H D+K +NI
Sbjct: 140 GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRC 196
Query: 827 HLAEFGFKYLTQLADGSFPAKIAWTESGE-FYNAMKEEMYMDVYGF-------GEIILEI 878
L +FG L +L + G+ Y M E+ YG G ILE+
Sbjct: 197 KLGDFGL--LVELGTAGA----GEVQEGDPRY--MAPELLQGSYGTAADVFSLGLTILEV 248
Query: 879 LTNGRLTNAGSSLQ---NKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPS 935
N L + G Q + SS L+ + ++L+ P
Sbjct: 249 ACNMELPHGGEGWQQLRQGYLPPEFTAGL-------SSELRSVLVMMLEPD-------PK 294
Query: 936 DRPSMEEALK 945
R + E L
Sbjct: 295 LRATAEALLA 304
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 4e-05
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 21/135 (15%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIGTVR----------HKNLIRLLGFCYNRHQAYL 763
TG +VK +E A R+ R T R H ++I L+ + +L
Sbjct: 118 TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFL 177
Query: 764 LYDYLPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 818
++D + G L + + K ++ I+ + + FLH + I H DLK NI
Sbjct: 178 VFDLMRKGELFDYLTEKVALSEKE-TRS--IMRSLLEAVSFLHAN---NIVHRDLKPENI 231
Query: 819 VFDENMEPHLAEFGF 833
+ D+NM+ L++FGF
Sbjct: 232 LLDDNMQIRLSDFGF 246
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 4e-05
Identities = 44/271 (16%), Positives = 82/271 (30%), Gaps = 58/271 (21%)
Query: 709 KAVLPTGITVSVKKIEWGATRIKIVSEFITRIG---TVRHKNL--IRLLGFCYNRHQAYL 763
+ + ++K + + + + I ++ + IRL + Y+
Sbjct: 74 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133
Query: 764 LYDYLPNGNLSEKIRTKR----DWAAKY--KIVLGVARGLCFLH-HDCYPAIPHGDLKAS 816
+ + N +L+ ++ K+ Y ++ V +H H I H DLK +
Sbjct: 134 VMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH----TIHQHG----IVHSDLKPA 184
Query: 817 NIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWT----------ESGEFYNAMKEEMY 865
N + + M L +FG + + K +
Sbjct: 185 NFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSK 243
Query: 866 M----DVYGFGEIILEILTNGRL-----TNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916
+ DV+ G I+ + G+ N S L E + LQ
Sbjct: 244 ISPKSDVWSLGCILYYMTY-GKTPFQQIINQISKLHAIIDPNHEIEFPD----IPEKDLQ 298
Query: 917 DEIK--LVLDVALLCTRSTPSDRPSMEEALK 945
D +K L D P R S+ E L
Sbjct: 299 DVLKCCLKRD---------PKQRISIPELLA 320
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 4e-05
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYDYLPN 770
T + ++K I + S+ + + ++ H N+++L F ++ YL+ +
Sbjct: 61 THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG 120
Query: 771 GNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DE 822
G L ++I + D AA I+ V G+ +LH I H DLK N++ ++
Sbjct: 121 GELFDEIIHRMKFNEVD-AA--VIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEK 174
Query: 823 NMEPHLAEFGF 833
+ + +FG
Sbjct: 175 DALIKIVDFGL 185
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 19/132 (14%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITR-IGT---VRHKNLIRLLGFCYNRHQAYLLYDY 767
T V+VK ++ R E I + I + H+N+++ G + YL +Y
Sbjct: 29 RVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 768 LPNGNLSEKI----RTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
G L ++I A ++ +++ GV +LH I H D+K N++ D
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGI---GITHRDIKPENLLLD 139
Query: 822 ENMEPHLAEFGF 833
E +++FG
Sbjct: 140 ERDNLKISDFGL 151
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 22/137 (16%)
Query: 709 KAVLPTGITVSVKKIEWGATRIKIVSEFITRIG---TVRHKNL--IRLLGFCYNRHQAYL 763
+ + ++K + + + + I ++ + IRL + Y+
Sbjct: 27 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86
Query: 764 LYDYLPNGNLSEKIRTKR----DWAAKY--KIVLGVARGLCFLH-HDCYPAIPHGDLKAS 816
+ + N +L+ ++ K+ Y ++ V +H H I H DLK +
Sbjct: 87 VMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH----TIHQHG----IVHSDLKPA 137
Query: 817 NIVFDENMEPHLAEFGF 833
N + + M L +FG
Sbjct: 138 NFLIVDGM-LKLIDFGI 153
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 5e-05
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
S+P + + L+L NQ+ P F + LK L L N+L F L L
Sbjct: 33 SVPAGIPTNA--QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQL 90
Query: 320 RLLSLMYNEMSGTVPE----SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTN 375
+L L N+++ +P LV L+ LF+ N + LP + R + L + + N
Sbjct: 91 TVLDLGTNQLT-VLPSAVFDRLVH---LKELFMCCNKLT-ELPRGIERLTHLTHLALDQN 145
Query: 376 NFNGSIP 382
SIP
Sbjct: 146 QLK-SIP 151
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 6e-05
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 293 TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV-QLPSLEILFIWNN 351
T + L L DN+++ P F L NL+ L L N++ +P + L L +L + N
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTN 98
Query: 352 YFSGSLPENL-GRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLS 410
+ LP + R L+ + + N +P I L L L N +
Sbjct: 99 QLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFD 156
Query: 411 NCSSLVRLRLEDN 423
SSL L N
Sbjct: 157 RLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 3e-04
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 29/165 (17%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
SVPA I + ++L L + + P F S +L+ L+L N L
Sbjct: 33 SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-------------- 76
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLA 282
+ +G + L + LD+ L+ +P + L L+ LF+ N+L
Sbjct: 77 GALPVG-------VFDSLTQL---TVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT 125
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327
+P R+T L L L N+L +F L +L L N
Sbjct: 126 E-LPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 45.8 bits (108), Expect = 6e-05
Identities = 28/148 (18%), Positives = 47/148 (31%), Gaps = 32/148 (21%)
Query: 714 TGITVSVKKIE---WGATRIKIVSEF-ITRIGTVRHKNLIRLL------GFCYNRHQAYL 763
TG V++K+ R + E I + + H N++ L
Sbjct: 38 TGEQVAIKQCRQELSPKNRERWCLEIQIMK--KLNHPNVVSAREVPDGLQKLAPNDLPLL 95
Query: 764 LYDYLPNGNLSEKIRTKR-------DWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLK 814
+Y G+L + + I + +LH + I H DLK
Sbjct: 96 AMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR----YLHENR---IIHRDLK 148
Query: 815 ASNIVFDENMEPH---LAEFGF-KYLTQ 838
NIV + + + G+ K L Q
Sbjct: 149 PENIVLQPGPQRLIHKIIDLGYAKELDQ 176
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 6e-05
Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 37/144 (25%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRIG-------TVRHKNLIRLLGFCYN--RHQAY 762
T +VK ++ +++ + + +RHKN+I+L+ YN + + Y
Sbjct: 27 SETLCRRAVKILK--KKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84
Query: 763 L-----------LYDYLPNGNLSEKIRTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIP 809
+ + D +P A Y +++ G+ +LH I
Sbjct: 85 MVMEYCVCGMQEMLDSVPEKRFPVCQ------AHGYFCQLIDGLE----YLHSQG---IV 131
Query: 810 HGDLKASNIVFDENMEPHLAEFGF 833
H D+K N++ ++ G
Sbjct: 132 HKDIKPGNLLLTTGGTLKISALGV 155
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 7e-05
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 19/132 (14%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITR-IGT---VRHKNLIRLLGFCYNRHQAYLLYDY 767
T V+VK ++ R E I + I + H+N+++ G + YL +Y
Sbjct: 29 RVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 768 LPNGNLSEKI----RTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
G L ++I A ++ +++ GV +LH I H D+K N++ D
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGI---GITHRDIKPENLLLD 139
Query: 822 ENMEPHLAEFGF 833
E +++FG
Sbjct: 140 ERDNLKISDFGL 151
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 8e-05
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 22/136 (16%)
Query: 714 TGITVSVKKIE------WGATRIKIVSEFITR-IGTVR----HKNLIRLLGFCYNRHQAY 762
T +VK I+ + A ++ + E + + +R H N+I+L +
Sbjct: 41 TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFF 100
Query: 763 LLYDYLPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASN 817
L++D + G L + + K ++ + +L V +C LH I H DLK N
Sbjct: 101 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV---ICALHKL---NIVHRDLKPEN 154
Query: 818 IVFDENMEPHLAEFGF 833
I+ D++M L +FGF
Sbjct: 155 ILLDDDMNIKLTDFGF 170
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 9e-05
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 743 VRHKNLIRLLGFCY------NRHQAYLLYDYLPNGNLSEKIRTKR---DWAAKY--KIVL 791
+ H N+++L N Y++++ + G + E K D A Y ++
Sbjct: 93 LDHPNVVKL----VEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIK 148
Query: 792 GVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842
G+ +LH Y I H D+K SN++ E+ +A+FG + +D
Sbjct: 149 GIE----YLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 9e-05
Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 24/133 (18%)
Query: 714 TGITVSVKKI------EW---GATR-IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763
TG V++KK A R I+++ + +H NL+ LL + + +L
Sbjct: 27 TGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-------KHPNLVNLLEVFRRKRRLHL 79
Query: 764 LYDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820
+++Y + + ++ + I + + F H H D+K NI+
Sbjct: 80 VFEYCDH-TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILI 135
Query: 821 DENMEPHLAEFGF 833
++ L +FGF
Sbjct: 136 TKHSVIKLCDFGF 148
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
T + +VK I+ + +E I + +H N+I L + Y++ + + G
Sbjct: 46 TNMEFAVKIID---KSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE 102
Query: 773 LSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENM 824
L +KI + R+ A+ ++ + + + +LH + H DLK SNI++ N
Sbjct: 103 LLDKILRQKFFSERE-AS--AVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNP 156
Query: 825 EP-HLAEFGF 833
E + +FGF
Sbjct: 157 ESIRICDFGF 166
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 24/133 (18%)
Query: 714 TGITVSVKKI------EWG---ATR-IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763
TG V++KK + A R IK++ + RH+NL+ LL C + + YL
Sbjct: 49 TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-------RHENLVNLLEVCKKKKRWYL 101
Query: 764 LYDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820
+++++ + + + + D+ K + + G+ F H I H D+K NI+
Sbjct: 102 VFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILV 157
Query: 821 DENMEPHLAEFGF 833
++ L +FGF
Sbjct: 158 SQSGVVKLCDFGF 170
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 18/133 (13%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
+G+ +K I R ++ E I + ++ H N+I++ + H Y++ +
Sbjct: 46 SGLERVIKTIN--KDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCE 103
Query: 770 NGNLSEKIRTKRDWAAKY------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF--- 820
G L E+I + + +++ + L + H + H DLK NI+F
Sbjct: 104 GGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDT 160
Query: 821 DENMEPHLAEFGF 833
+ + +FG
Sbjct: 161 SPHSPIKIIDFGL 173
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 2e-04
Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Query: 756 YNRHQAYLLYDYLPNGNLSEKIRTK-RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLK 814
+ Q +++ ++ G E++RTK A I+ + L H DL
Sbjct: 132 FKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEA--SLRFEHRDLH 189
Query: 815 ASNIVFDENMEPHLAEFG 832
N++ + L
Sbjct: 190 WGNVLLKKTSLKKLHYTL 207
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 21/133 (15%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIG---TVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
T +VK I + + K S + + + H N+++L + Y++ +
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG 105
Query: 771 GNLSEKIRTK-----RDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF--- 820
G L ++I + D AA+ ++ G+ ++H I H DLK NI+
Sbjct: 106 GELFDEIIKRKRFSEHD-AARIIKQVFSGIT----YMHKH---NIVHRDLKPENILLESK 157
Query: 821 DENMEPHLAEFGF 833
+++ + + +FG
Sbjct: 158 EKDCDIKIIDFGL 170
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 30/143 (20%)
Query: 708 CKAV-LPTGITVSVKKIEWGATRIK-----IVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761
A + V++KK+ + + I+ E + + +RH N I+ G H A
Sbjct: 71 YFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKE-VRFLQKLRHPNTIQYRGCYLREHTA 129
Query: 762 YLLYDYL----------PNGNLSEK-IRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPH 810
+L+ +Y L E I + G +GL +LH + H
Sbjct: 130 WLVMEYCLGSASDLLEVHKKPLQEVEIAA---------VTHGALQGLAYLHSH---NMIH 177
Query: 811 GDLKASNIVFDENMEPHLAEFGF 833
D+KA NI+ E L +FG
Sbjct: 178 RDVKAGNILLSEPGLVKLGDFGS 200
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 2e-04
Identities = 33/142 (23%), Positives = 54/142 (38%), Gaps = 28/142 (19%)
Query: 708 CKAV-LPTGITVSVKKI------EWGATR----IKIVSEFITRIGTVRHKNLIRLL---- 752
C A V++KK+ + A R + ++ HKN+I LL
Sbjct: 79 CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-------NHKNIISLLNVFT 131
Query: 753 --GFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPH 810
YL+ + + NL + I+ + D ++ + G+ LH I H
Sbjct: 132 PQKTLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIH 187
Query: 811 GDLKASNIVFDENMEPHLAEFG 832
DLK SNIV + + +FG
Sbjct: 188 RDLKPSNIVVKSDCTLKILDFG 209
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 48/279 (17%), Positives = 87/279 (31%), Gaps = 68/279 (24%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITR-----IGTVRHKNLIRLLGFCYNRHQAYL----- 763
G V+VK++ + + H N+IR Y+
Sbjct: 38 QGRPVAVKRML------IDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91
Query: 764 ---LYDYL-PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 819
L D + E ++ ++++ ++ +A G+ LH I H DLK NI+
Sbjct: 92 NLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHLHSLK---IIHRDLKPQNIL 147
Query: 820 FDENMEPH-------------LAEFGF-KYLTQLADGSFPAKIAWTESGEFY-------- 857
+ +++FG K L SF + SG
Sbjct: 148 VSTSSRFTADQQTGAENLRILISDFGLCKKLDS-GQSSFRTNLN-NPSGTSGWRAPELLE 205
Query: 858 ---NAMKEEMY---MDVYGFGEIILEILTNGRLTNAGSSLQNKPI---DGLLGEMYNENE 908
N + +D++ G + IL+ G+ + I L EM ++
Sbjct: 206 ESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHD 265
Query: 909 VGSSSSLQDEIK--LVLDVALLCTRSTPSDRPSMEEALK 945
+ D I + D P RP+ + L+
Sbjct: 266 RSLIAEATDLISQMIDHD---------PLKRPTAMKVLR 295
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 3e-04
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYDYLPN 770
T +VK I + + K S + + ++ H N+++L + Y++ +
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG 105
Query: 771 GNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DE 822
G L ++I + D AA +I+ V G+ ++H I H DLK NI+ ++
Sbjct: 106 GELFDEIIKRKRFSEHD-AA--RIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEK 159
Query: 823 NMEPHLAEFGF 833
+ + + +FG
Sbjct: 160 DCDIKIIDFGL 170
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 3e-04
Identities = 59/292 (20%), Positives = 100/292 (34%), Gaps = 93/292 (31%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772
V+VK ++ A+ + E + + N+++LLG C LL++Y+ G+
Sbjct: 78 TMVAVKMLKEEASADMQADFQRE-AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGD 136
Query: 773 LSEKIRTKRDWAAKY--------------------------KIVLGVARGLCFL--HHDC 804
L+E +R+ I VA G+ +L
Sbjct: 137 LNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-- 194
Query: 805 YPAIPHGDLKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGE 855
H DL N + ENM +A+FG Y + + P + W ES
Sbjct: 195 ---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR--WMPPES-- 247
Query: 856 FYNAMKEEMYM---DVYGFGEIIL-EILTNGR-----LTN--------AGSSLQNKPIDG 898
+ Y DV+ +G ++L EI + G + + G+ L P +
Sbjct: 248 ----IFYNRYTTESDVWAYG-VVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILA-CP-EN 300
Query: 899 LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950
E+YN L+ C P+DRPS ++L +
Sbjct: 301 CPLELYN---------------LMRL----CWSKLPADRPSFCSIHRILQRM 333
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 Length = 185 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 25/153 (16%), Positives = 52/153 (33%), Gaps = 19/153 (12%)
Query: 246 EVQYLDIAGANLSGSIPKELSNLTKLESLFLFR-NQLAGQVPWEFSRV----TTLKSLDL 300
V + ++ ++ + +N LE + L + + T +K +
Sbjct: 13 PVPDEEPNSTDVEETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSI 72
Query: 301 SDNRLSGPIPESFADL----KNLRLLSLMYNEMSGT----VPESLVQLPSLEILFIWNNY 352
R + P+ + A++ L+ L++ N +SG+ + E+L SL L I N
Sbjct: 73 VGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQS 132
Query: 353 FS------GSLPENLGRNSKLRWVDVSTNNFNG 379
+ L +N+ L
Sbjct: 133 QPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 165
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 3e-04
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 743 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDW-----AAKY-KIVLGVARG 796
+RH L+ L + ++ ++Y+++ G L EK+ + + A +Y + V G
Sbjct: 211 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCK---G 267
Query: 797 LCFLHHDCYPAIPHGDLKASNIVFDENMEPHL--AEFGF 833
LC +H + H DLK NI+F L +FG
Sbjct: 268 LCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGL 303
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 3e-04
Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 34/150 (22%)
Query: 708 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR------------HKNLIRLL--- 752
C V GI V++K++ + + V+ R H N++ L
Sbjct: 39 CAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIF 98
Query: 753 --GFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAK-------YKIVLGVARGLCFLHHD 803
H+ YL+ + + +L++ I +R + Y I+ GL LH
Sbjct: 99 VHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHIL----LGLHVLH-- 151
Query: 804 CYPA-IPHGDLKASNIVFDENMEPHLAEFG 832
A + H DL NI+ +N + + +F
Sbjct: 152 --EAGVVHRDLHPGNILLADNNDITICDFN 179
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 30/140 (21%), Positives = 55/140 (39%), Gaps = 21/140 (15%)
Query: 709 KAV-LPTGITVSVKKIEWGATRIK-IVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766
K + TG ++K ++ + I E H+N+ G + + + D
Sbjct: 42 KGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYG-AFIKKNPPGMDD 100
Query: 767 -------YLPNGNLSEKIRTKR------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 813
+ G++++ I+ + +W A I + RGL LH + H D+
Sbjct: 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLHQHK---VIHRDI 155
Query: 814 KASNIVFDENMEPHLAEFGF 833
K N++ EN E L +FG
Sbjct: 156 KGQNVLLTENAEVKLVDFGV 175
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 4e-04
Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 25/133 (18%)
Query: 714 TGITVSVKKIEWGATR----------IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763
TG V++KKI I ++ E H N+++LL + ++ YL
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKEL-------NHPNIVKLLDVIHTENKLYL 79
Query: 764 LYDYLPNGNLSEKIRTKRDWAAKYKIV----LGVARGLCFLHHDCYPAIPHGDLKASNIV 819
++++L +L + + ++ + +GL F H + H DLK N++
Sbjct: 80 VFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLL 135
Query: 820 FDENMEPHLAEFG 832
+ LA+FG
Sbjct: 136 INTEGAIKLADFG 148
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 4e-04
Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 22/136 (16%)
Query: 709 KAVLPTGITVSVKKIEWGATR----------IKIVSEFITRIGTVRHKNLIRLLGFCYNR 758
KA G T ++KKI I I+ E +H N+++L + +
Sbjct: 20 KAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-------KHSNIVKLYDVIHTK 72
Query: 759 HQAYLLYDYLPN--GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKAS 816
+ L++++L L + + +L + G+ + H + H DLK
Sbjct: 73 KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQ 129
Query: 817 NIVFDENMEPHLAEFG 832
N++ + E +A+FG
Sbjct: 130 NLLINREGELKIADFG 145
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 5e-04
Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 22/136 (16%)
Query: 709 KAVLPTGITVSVKKIEWGATR----------IKIVSEFITRIGTVRHKNLIRLLGFCYNR 758
KA G V++K+I A I ++ E H N++ L+ ++
Sbjct: 39 KAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-------HHPNIVSLIDVIHSE 91
Query: 759 HQAYLLYDYLPN--GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKAS 816
L+++++ + ++ +T + + + RG+ H I H DLK
Sbjct: 92 RCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQ 148
Query: 817 NIVFDENMEPHLAEFG 832
N++ + + LA+FG
Sbjct: 149 NLLINSDGALKLADFG 164
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 5e-04
Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 28/143 (19%)
Query: 707 GCKAV-LPTGITVSVKKI------EWGATR----IKIVSEFITRIGTVRHKNLIRLL--- 752
C A V++KK+ + A R + ++ HKN+I LL
Sbjct: 41 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-------NHKNIIGLLNVF 93
Query: 753 ---GFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIP 809
Y++ + + NL + I+ + D ++ + G+ LH I
Sbjct: 94 TPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGII 149
Query: 810 HGDLKASNIVFDENMEPHLAEFG 832
H DLK SNIV + + +FG
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFG 172
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 745 HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCF 799
H N+++L +++ +L+ + L G L E+I+ K + A+ I+ + +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETE-AS--YIMRKLVSAVSH 121
Query: 800 LHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGF 833
+H + H DLK N++F ++N+E + +FGF
Sbjct: 122 MHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGF 155
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 6e-04
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 36/177 (20%)
Query: 680 PQFTANDVLRS-FNSTECEEAARPQ----SAAGCKAV-LPTGITVSVKKI------EWGA 727
F +V ++ + +P A C AV TG V++KK+ E A
Sbjct: 9 SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFA 68
Query: 728 TR----IKIVSEFITRIGTVRHKNLIRLL------GFCYNRHQAYLLYDYLPNGNLSEKI 777
R ++++ RH+N+I LL + YL+ ++ +L + +
Sbjct: 69 KRAYRELRLLKHM-------RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-DLGKLM 120
Query: 778 RTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 832
+ ++ + ++ +V + +GL ++H I H DLK N+ +E+ E + +FG
Sbjct: 121 KHEKLGEDRIQF-LVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFG 173
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 6e-04
Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 43/172 (25%)
Query: 708 CKAV-LPTGITVSVKKI----EWGATR----IKIVSEFITRIGTVRHKNLIRLL------ 752
AV V++KKI IKI+ H N++++
Sbjct: 28 FSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-------DHDNIVKVFEILGPS 80
Query: 753 --------GFCYNRHQAYLLYDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHH 802
G + Y++ +Y+ +L+ + + A+ + + RGL ++H
Sbjct: 81 GSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARL-FMYQLLRGLKYIH- 137
Query: 803 DCYPA-IPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADGSFPAKIAWTE 852
A + H DLK +N+ + E++ + +FG L ++ D + K +E
Sbjct: 138 ---SANVLHRDLKPANLFINTEDLVLKIGDFG---LARIMDPHYSHKGHLSE 183
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 6e-04
Identities = 22/129 (17%), Positives = 54/129 (41%), Gaps = 12/129 (9%)
Query: 713 PTGITVSVKKIEW---GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
P+G ++VK+I + +++ + + TV + G + ++ + +
Sbjct: 30 PSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM- 88
Query: 770 NGNLSEKIRTKRDWAAKY------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 823
+ +L + + D KI + + + L LH ++ H D+K SN++ +
Sbjct: 89 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINAL 146
Query: 824 MEPHLAEFG 832
+ + +FG
Sbjct: 147 GQVKMCDFG 155
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 6e-04
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 35/146 (23%)
Query: 708 CKAVL-PTGITVSVKKIEWGATR----IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA- 761
+A L +G V++KK+ ++I+ + H N++RL F Y+ +
Sbjct: 71 YQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-------DHCNIVRLRYFFYSSGEKK 123
Query: 762 -----YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLG--------VARGLCFLH-HDCYPA 807
L+ DY+P + R AK + + + R L ++H
Sbjct: 124 DEVYLNLVLDYVPE-TVYRVARHY--SRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---- 176
Query: 808 IPHGDLKASNIVFDENMEP-HLAEFG 832
I H D+K N++ D + L +FG
Sbjct: 177 ICHRDIKPQNLLLDPDTAVLKLCDFG 202
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 8e-04
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 716 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFC-YNRHQAYLLYDYLPNG 771
TV+VK ++ GAT ++SE I H N++ LLG C ++ ++ G
Sbjct: 53 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 112
Query: 772 NLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASN 817
NLS +R+KR+ YK +G F Y DLK
Sbjct: 113 NLSTYLRSKRNEFVPYKT-----KGARFRQGKDYVGAIPVDLKRRL 153
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 8e-04
Identities = 31/136 (22%), Positives = 65/136 (47%), Gaps = 28/136 (20%)
Query: 714 TGITVSVKKI----EWG----ATR-IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764
TG+ V++K++ E G A R I ++ E +H+N++RL + ++ L+
Sbjct: 29 TGVYVALKEVKLDSEEGTPSTAIREISLMKEL-------KHENIVRLYDVIHTENKLTLV 81
Query: 765 YDYLPNGNLSEKIRTKRDWAAKYKIVLGVA--------RGLCFLHHDCYPAIPHGDLKAS 816
++++ N +L + + ++ + L + +GL F H + I H DLK
Sbjct: 82 FEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQ 137
Query: 817 NIVFDENMEPHLAEFG 832
N++ ++ + L +FG
Sbjct: 138 NLLINKRGQLKLGDFG 153
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 955 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 100.0 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.98 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.98 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.98 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.97 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.97 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.97 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.97 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.97 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.97 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.96 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.96 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.96 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.96 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.96 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.95 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.95 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.95 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.95 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.95 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.94 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.94 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.94 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.94 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.93 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.93 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.93 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.93 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.93 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.92 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.92 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.91 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.9 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.9 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.9 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.9 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.9 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.9 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.89 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.89 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.89 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.88 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.88 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.88 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.88 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.87 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.87 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.87 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.87 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.87 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.86 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.86 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.85 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.85 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.85 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.84 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.83 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.83 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.83 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.82 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.81 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.8 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.8 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.79 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.78 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.77 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.77 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.77 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.77 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.77 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.76 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.76 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.76 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.76 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.73 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.73 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.72 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.72 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.72 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.71 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.69 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.69 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.68 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.65 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.64 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.63 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.62 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.61 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.61 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.6 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.6 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.59 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.58 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.54 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.5 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.48 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.48 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.47 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.46 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.46 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.44 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.44 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.38 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.36 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.25 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.25 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.24 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.23 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.14 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.11 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.05 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.03 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.91 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.9 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.86 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.82 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.73 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.67 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.65 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 98.45 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 98.4 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.39 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.32 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.24 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.24 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.18 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.15 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.96 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 97.8 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.71 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.48 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.45 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.42 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.39 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.19 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.02 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 96.83 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 96.66 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.55 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.45 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.42 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.37 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.36 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 96.29 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 95.88 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 95.71 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 95.7 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 95.5 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 95.24 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 94.69 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 90.91 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 89.38 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 83.58 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-83 Score=791.62 Aligned_cols=592 Identities=32% Similarity=0.463 Sum_probs=485.8
Q ss_pred CCChhhHHHHHHhhhhCCCCCCCCCCCCCCCCCCCCCCCCCccccceeecCCCCcEEEEEcCCCCCCcc---CCC-----
Q 002186 22 SANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGA---LPG----- 93 (955)
Q Consensus 22 ~~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~---~~~----- 93 (955)
++.++|++|||+||+++.||. .+++|..+ .+||+|.||+|+ +++|+.++|++.++.|. +++
T Consensus 8 ~~~~~~~~all~~k~~~~~~~-~l~~W~~~--------~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L 76 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKN-LLPDWSSN--------KNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSL 76 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTT-SSTTCCTT--------SCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTC
T ss_pred cCCHHHHHHHHHHHhhCCCcc-cccCCCCC--------CCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhcc
Confidence 446789999999999999988 99999743 679999999998 68999999999999987 443
Q ss_pred ------------------CcchhcCCCCcEEECCCCcCcccCCc--cccCCCCCCEEEccCCcCCccCCccc-cCCCCCc
Q 002186 94 ------------------KPLRIFFNELVDLNLSHNSFSGQFPV--EIFNLTSLISLDISRNNFSGHFPGGI-QSLRNLL 152 (955)
Q Consensus 94 ------------------~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~ 152 (955)
.+.. +++|++|||++|.++|.+|. .++++++|++|||++|.+.+.+|..+ ..+++|+
T Consensus 77 ~~L~~l~~~~~~~~~l~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 154 (768)
T 3rgz_A 77 TGLESLFLSNSHINGSVSGFKC--SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLE 154 (768)
T ss_dssp TTCCEEECTTSCEEECCCCCCC--CTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCS
T ss_pred CcccccCCcCCCcCCCchhhcc--CCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCC
Confidence 3333 68999999999999999998 89999999999999999988888765 7778888
Q ss_pred EEeCCCCCCCCCCchh---h----------------------cCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCC
Q 002186 153 VLDAFSNSFSGSVPAE---I----------------------SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGN 207 (955)
Q Consensus 153 ~LdL~~N~l~~~~p~~---~----------------------~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N 207 (955)
+|||++|.+++..|.. + .++++|++|+|++|.+++.+|. |+++++|++|+|++|
T Consensus 155 ~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n 233 (768)
T 3rgz_A 155 VLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGN 233 (768)
T ss_dssp EEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSS
T ss_pred EEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCC
Confidence 8888877777655543 2 4677888888888888887777 889999999999999
Q ss_pred CCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCC-CCCCEEEeccccccccCC
Q 002186 208 LLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNL-TKLESLFLFRNQLAGQVP 286 (955)
Q Consensus 208 ~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~p 286 (955)
.+++.+|..++.+++|++|++++|.+.+.+|.. .+++|++|++++|.+++.+|..+..+ ++|++|++++|++++.+|
T Consensus 234 ~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p 311 (768)
T 3rgz_A 234 KLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311 (768)
T ss_dssp CCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCC
T ss_pred cCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccc
Confidence 998888888888888888888888777665543 45555555555555555555444443 455555555555554444
Q ss_pred ccCcCCCccCEEEccCC-------------------------CCCCCCCcccCCCC-CCcEEecccccCCCCCccccCC-
Q 002186 287 WEFSRVTTLKSLDLSDN-------------------------RLSGPIPESFADLK-NLRLLSLMYNEMSGTVPESLVQ- 339 (955)
Q Consensus 287 ~~~~~l~~L~~L~Ls~N-------------------------~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~- 339 (955)
..|..+++|++|++++| ++++.+|..+..++ +|+.|++++|++++.+|..+..
T Consensus 312 ~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~ 391 (768)
T 3rgz_A 312 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN 391 (768)
T ss_dssp GGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCS
T ss_pred hHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhc
Confidence 44444444444444444 44444444444444 4555555555555555555444
Q ss_pred -CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEE
Q 002186 340 -LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRL 418 (955)
Q Consensus 340 -l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L 418 (955)
+++|+.|++++|.+++.+|..++.+++|+.|++++|.+++.+|..+..+.+|+.|++++|.+.+.+|..+..+++|++|
T Consensus 392 ~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 471 (768)
T 3rgz_A 392 PKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETL 471 (768)
T ss_dssp TTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE
T ss_pred ccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEE
Confidence 6677888888888888888888888899999999999998888888888899999999999999999999999999999
Q ss_pred ECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCccccc
Q 002186 419 RLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNI 498 (955)
Q Consensus 419 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l 498 (955)
++++|++++.+|..+.++++|++|++++|++++.+|..+..+++|++|++++| .+.|.+|..+..+++|+.|++++|.+
T Consensus 472 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l 550 (768)
T 3rgz_A 472 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN-SFSGNIPAELGDCRSLIWLDLNTNLF 550 (768)
T ss_dssp ECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS-CCEEECCGGGGGCTTCCEEECCSSEE
T ss_pred EecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCC-cccCcCCHHHcCCCCCCEEECCCCcc
Confidence 99999999999999999999999999999999999999999999999999999 78889999999999999999999999
Q ss_pred CCCCCCC-----------------------------------------------------------------------Cc
Q 002186 499 TGNLPPF-----------------------------------------------------------------------KS 507 (955)
Q Consensus 499 ~~~~p~~-----------------------------------------------------------------------~~ 507 (955)
+|.+|.. ..
T Consensus 551 ~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~ 630 (768)
T 3rgz_A 551 NGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN 630 (768)
T ss_dssp ESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSS
T ss_pred CCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhc
Confidence 8877731 23
Q ss_pred CCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEE
Q 002186 508 CKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLN 587 (955)
Q Consensus 508 ~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 587 (955)
++.|+.||+++|+++|.+|..++++++|+.|||++|+++|.+|..++++++|++||||+|+++|.+|..++.+++|++||
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeccCCcccccccCCCccCCCCCCCCCCCCCCCcccc
Q 002186 588 VSFNDISGSIPSGKVLRLMGSSAYAGNPKLCGAPLQPCHASVA 630 (955)
Q Consensus 588 ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lcg~~l~~c~~~~~ 630 (955)
+++|+++|.||.++++.+++..+|.|||++||.|+.+|....+
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~~~ 753 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNA 753 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCSCC-
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCCCcc
Confidence 9999999999999999999999999999999999999976543
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-65 Score=627.47 Aligned_cols=548 Identities=31% Similarity=0.446 Sum_probs=432.0
Q ss_pred Ccccc-ceeecCCCCcEEEE--EcCCCCCCcc-CCCC---cchh--cCCCCcEEECCCCcCcccCCccccCCCCCCEEEc
Q 002186 62 ACSWS-GVKCNKNNTIVVGI--NLSMKGLSGA-LPGK---PLRI--FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDI 132 (955)
Q Consensus 62 ~c~w~-gv~C~~~~~~v~~l--~l~~~~l~g~-~~~~---~~~~--~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 132 (955)
.-+|. +..|+. |.+|+|- .+..-.+++. +.+. +... .+++|+.++++.|.+. .+|..|+++++|++|||
T Consensus 30 l~~W~~~~~~C~-w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~L 107 (768)
T 3rgz_A 30 LPDWSSNKNPCT-FDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHIN-GSVSGFKCSASLTSLDL 107 (768)
T ss_dssp STTCCTTSCGGG-STTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEE-ECCCCCCCCTTCCEEEC
T ss_pred ccCCCCCCCCcC-CcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcC-CCchhhccCCCCCEEEC
Confidence 45795 666765 7789984 0111122222 2222 1111 1345555566555553 35588999999999999
Q ss_pred cCCcCCccCCc--cccCCCCCcEEeCCCCCCCCCCchhh-cCCCcceEEEecCCCCcccCCCC-----------------
Q 002186 133 SRNNFSGHFPG--GIQSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQ----------------- 192 (955)
Q Consensus 133 s~N~l~~~~p~--~~~~l~~L~~LdL~~N~l~~~~p~~~-~~L~~L~~L~Ls~n~l~~~~p~~----------------- 192 (955)
++|.++|.+|. .++++++|++|||++|.+++.+|..+ .++++|++|+|++|.+++..|..
T Consensus 108 s~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~ 187 (768)
T 3rgz_A 108 SRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISG 187 (768)
T ss_dssp CSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCS
T ss_pred CCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCC
Confidence 99999999998 99999999999999999999888876 89999999999999998766543
Q ss_pred --------cCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCcc
Q 002186 193 --------FGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264 (955)
Q Consensus 193 --------~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 264 (955)
++++++|++|+|++|.+++.+|. ++.+++|++|++++|.+.+.+|..++++++|++|++++|.+++.+|..
T Consensus 188 n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 266 (768)
T 3rgz_A 188 NKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL 266 (768)
T ss_dssp SEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC
T ss_pred CcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc
Confidence 25778899999999999998887 999999999999999999999999999999999999999999988875
Q ss_pred ccCCCCCCEEEeccccccccCCccCcCC-CccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccc-cCCCCC
Q 002186 265 LSNLTKLESLFLFRNQLAGQVPWEFSRV-TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES-LVQLPS 342 (955)
Q Consensus 265 l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~ 342 (955)
.+++|++|++++|++++.+|..+... ++|++|+|++|++++.+|..|+.+++|+.|++++|+++|.+|.. +..+++
T Consensus 267 --~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~ 344 (768)
T 3rgz_A 267 --PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG 344 (768)
T ss_dssp --CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTT
T ss_pred --ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCC
Confidence 89999999999999999999988775 99999999999999999999999999999999999999888865 888888
Q ss_pred ccEEEccCCcCcccCCcccCCCC-CCCeeecCCCccc--------------------------ccCCCCCCCCCccceee
Q 002186 343 LEILFIWNNYFSGSLPENLGRNS-KLRWVDVSTNNFN--------------------------GSIPPDICSGGVLFKLI 395 (955)
Q Consensus 343 L~~L~L~~N~l~~~~p~~~~~~~-~L~~L~ls~N~l~--------------------------g~ip~~~~~~~~l~~l~ 395 (955)
|++|++++|.+++.+|..+..++ +|+.|++++|.++ +.+|..+..+..|+.|+
T Consensus 345 L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 424 (768)
T 3rgz_A 345 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLH 424 (768)
T ss_dssp CCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEE
T ss_pred CCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEE
Confidence 88888888888887777665554 4555555555554 45555555555666666
Q ss_pred ccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCC
Q 002186 396 LFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLG 475 (955)
Q Consensus 396 l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~ 475 (955)
+++|.+++.+|..+..+++|+.|++++|++++.+|..+..+++|++|++++|++++.+|..+..+++|++|++++| .+.
T Consensus 425 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~ 503 (768)
T 3rgz_A 425 LSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNN-RLT 503 (768)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS-CCC
T ss_pred CcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCC-ccC
Confidence 6666666666666666666666666666666666666777777777777777777777777777777777777777 666
Q ss_pred CCCCcccCCCCccccccCcccccCCCCCCC-CcCCccceEeccccccccccCCCC-------------------------
Q 002186 476 GMIPAQTWSLPSLQNFSASACNITGNLPPF-KSCKSISVIESHMNNLSGTIPESV------------------------- 529 (955)
Q Consensus 476 ~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~-~~~~~l~~l~l~~N~l~g~~p~~~------------------------- 529 (955)
+.+|.++..+++|+.|++++|+++|.+|.. ..+++|+.|++++|.++|.+|..+
T Consensus 504 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (768)
T 3rgz_A 504 GEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGM 583 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSC
T ss_pred CcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccc
Confidence 777777777777777777777777777753 677888888888888877766533
Q ss_pred ---------------------------------------------CcccccceeeeccccccccchhhhcCCCCCcEEEC
Q 002186 530 ---------------------------------------------SNCVELERIDLANNKLIGSIPEVLARLPVLGVLDL 564 (955)
Q Consensus 530 ---------------------------------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 564 (955)
..+++|+.|||++|+++|.+|..+++++.|++|||
T Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~L 663 (768)
T 3rgz_A 584 KKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNL 663 (768)
T ss_dssp CTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEEC
T ss_pred cccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeC
Confidence 33567888999999999999999999999999999
Q ss_pred CCCCCccccCCCcCCCCCCcEEECCCCcceeccCCc-ccccccCCCccCCCC
Q 002186 565 SHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG-KVLRLMGSSAYAGNP 615 (955)
Q Consensus 565 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~ 615 (955)
++|+++|.+|..|+.+++|++||+|+|+++|.+|.. ..+..+....+.+|+
T Consensus 664 s~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~ 715 (768)
T 3rgz_A 664 GHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN 715 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSE
T ss_pred cCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCc
Confidence 999999999999999999999999999999999865 334445555666664
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-58 Score=561.11 Aligned_cols=545 Identities=21% Similarity=0.181 Sum_probs=475.6
Q ss_pred CcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEE
Q 002186 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154 (955)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 154 (955)
..++.++++++.+.+..+..+.. +++|++|||++|.+++..|..|.++++|++|+|++|.+++..+..|+++++|++|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 102 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTR--YSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL 102 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGG--GTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEE
T ss_pred CCCcEEECCCCCCCCcCHHHHhC--CCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEE
Confidence 46888999999998866555666 7899999999999999999999999999999999999997766789999999999
Q ss_pred eCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhcc--CCCCCcEEeccccc
Q 002186 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG--MLKTVTHMEIGYNF 232 (955)
Q Consensus 155 dL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~l~~n~ 232 (955)
+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|.+++..|..+. .+++|+.|++++|.
T Consensus 103 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 103 HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp ECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCC
T ss_pred ECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCc
Confidence 9999999988788999999999999999999998899999999999999999999988887765 56899999999999
Q ss_pred ccCCCCccccCC---------------------------CCCcEEeccCCCCCCCCCccccCCCC--CCEEEeccccccc
Q 002186 233 YQGNIPWQLGNM---------------------------SEVQYLDIAGANLSGSIPKELSNLTK--LESLFLFRNQLAG 283 (955)
Q Consensus 233 l~g~~p~~~~~l---------------------------~~L~~L~Ls~n~l~~~~p~~l~~l~~--L~~L~L~~N~l~~ 283 (955)
+.+..|..+..+ ++|+.|++++|.+++..|..+.+++. |++|++++|++++
T Consensus 183 l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 183 IKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCE
T ss_pred ccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCc
Confidence 988888766544 56788888888888888888887754 9999999999999
Q ss_pred cCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCC-----CCcc----ccCCCCCccEEEccCCcCc
Q 002186 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG-----TVPE----SLVQLPSLEILFIWNNYFS 354 (955)
Q Consensus 284 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----~~p~----~l~~l~~L~~L~L~~N~l~ 354 (955)
..|..|..+++|++|++++|++++..|..|..+++|+.|++++|...+ .+|. .+..+++|++|++++|.++
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred cCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 888889999999999999999999889999999999999999876554 2333 6788999999999999999
Q ss_pred ccCCcccCCCCCCCeeecCCCccccc-CCCCC-C--CCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccc
Q 002186 355 GSLPENLGRNSKLRWVDVSTNNFNGS-IPPDI-C--SGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIP 430 (955)
Q Consensus 355 ~~~p~~~~~~~~L~~L~ls~N~l~g~-ip~~~-~--~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 430 (955)
+..|..+..+++|++|++++|.+.+. ++... . ....|+.+++++|++++..|..+..+++|+.|++++|++++.+|
T Consensus 343 ~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 422 (680)
T 1ziw_A 343 GIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECC
T ss_pred CCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccC
Confidence 98888999999999999999986543 23222 1 12579999999999999999999999999999999999998776
Q ss_pred -hhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCC--CCCCcccCCCCccccccCcccccCCCCCC-CC
Q 002186 431 -LKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLG--GMIPAQTWSLPSLQNFSASACNITGNLPP-FK 506 (955)
Q Consensus 431 -~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~--~~~p~~~~~l~~L~~l~ls~n~l~~~~p~-~~ 506 (955)
..|.++++|++|++++|++.+..+..+..+++|++|++++| .+. +.+|..+..+++|+.|++++|++++..|. +.
T Consensus 423 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~ 501 (680)
T 1ziw_A 423 GQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRV-ALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLE 501 (680)
T ss_dssp SGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTS-CCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cccccCcccccEEecCCCCcceeChhhhhcCcccccchhccc-cccccccCCcccccCCCCCEEECCCCCCCcCChhhhc
Confidence 68999999999999999999988999999999999999999 443 57888999999999999999999976665 58
Q ss_pred cCCccceEeccccccccccC--------CCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcC
Q 002186 507 SCKSISVIESHMNNLSGTIP--------ESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFG 578 (955)
Q Consensus 507 ~~~~l~~l~l~~N~l~g~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 578 (955)
.+++|+.|++++|++++..+ ..+.++++|+.|+|++|+++...+..|.++++|+.|||++|++++..+..|.
T Consensus 502 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 581 (680)
T 1ziw_A 502 GLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFN 581 (680)
T ss_dssp TCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhC
Confidence 89999999999999986532 3478999999999999999966666899999999999999999998888899
Q ss_pred CCCCCcEEECCCCcceeccCCcc--cccccCCCccCCCCCCCCCCC
Q 002186 579 SCSSLTVLNVSFNDISGSIPSGK--VLRLMGSSAYAGNPKLCGAPL 622 (955)
Q Consensus 579 ~l~~L~~L~ls~N~l~g~ip~~~--~~~~~~~~~~~~n~~lcg~~l 622 (955)
.+++|++|++++|++++..|..- .+..+....+.+||..|+++.
T Consensus 582 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 582 NQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 99999999999999998665431 456677778999999998763
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-57 Score=542.16 Aligned_cols=501 Identities=19% Similarity=0.174 Sum_probs=440.9
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
..+++|||++|.+++..|..|.++++|++|+|++|++.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 36899999999999999999999999999999999999999999999999999999999999988999999999999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCc--EEeccCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ--YLDIAGANLS 258 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~--~L~Ls~n~l~ 258 (955)
++|.+++..|..|+++++|++|+|++|.+++..+..+..+++|++|++++|.+.+..|..++++++|+ .|++++|.++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 99999987788899999999999999999885444555599999999999999988888999999999 8999999999
Q ss_pred CCCCccccCCCCCCEEEecccccc--------------------------ccCCccCcCCC--ccCEEEccCCCCCCCCC
Q 002186 259 GSIPKELSNLTKLESLFLFRNQLA--------------------------GQVPWEFSRVT--TLKSLDLSDNRLSGPIP 310 (955)
Q Consensus 259 ~~~p~~l~~l~~L~~L~L~~N~l~--------------------------~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p 310 (955)
+..|..+.. .+|+.|++++|... ...+..|..+. +|+.|++++|.+++..+
T Consensus 193 ~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 193 GIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp EECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred ccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 877776654 67888888877511 01111222222 78999999999998888
Q ss_pred cccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCC-CCCCC
Q 002186 311 ESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD-ICSGG 389 (955)
Q Consensus 311 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~-~~~~~ 389 (955)
..|+.+++|+.|++++|+++ .+|..+..+++|++|++++|.+++..|..+..+++|+.|++++|.+.+.+|.. +..+.
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 88999999999999999998 68888999999999999999999888889999999999999999999888775 67788
Q ss_pred ccceeeccCCCCCCCC--CcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcc-hhhccCCccc
Q 002186 390 VLFKLILFSNNFTGSL--SPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTD-INQASKLEYF 466 (955)
Q Consensus 390 ~l~~l~l~~n~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~-~~~~~~L~~L 466 (955)
+|+.|++++|.+.+.. +..+..+++|++|++++|++++..|..|..+++|++|++++|++.+..|.. +..+++|++|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 9999999999998876 778899999999999999999988999999999999999999999877654 8889999999
Q ss_pred ccCCCCCCCCCCCcccCCCCccccccCcccccCCC-CC---CCCcCCccceEeccccccccccCCCCCcccccceeeecc
Q 002186 467 NVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN-LP---PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLAN 542 (955)
Q Consensus 467 ~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~-~p---~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~ 542 (955)
++++| .+.+..|..+..+++|+.|++++|.+++. +| .+..+++|+.|++++|++++..|..+.++++|+.|+|++
T Consensus 431 ~l~~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 509 (606)
T 3t6q_A 431 NLSHS-LLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSH 509 (606)
T ss_dssp ECTTC-CCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCC-ccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCC
Confidence 99999 77778888888999999999999998873 22 257789999999999999998899999999999999999
Q ss_pred ccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCcccccc
Q 002186 543 NKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRL 605 (955)
Q Consensus 543 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~~~ 605 (955)
|++++..|..+.+++.| .|+|++|++++.+|..|..+++|++|++++|++++.++......+
T Consensus 510 N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~w 571 (606)
T 3t6q_A 510 NRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIYFLEW 571 (606)
T ss_dssp SCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGHHHHHH
T ss_pred CccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcHHHHHH
Confidence 99999999999999999 999999999999998899999999999999999988875544433
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-55 Score=536.41 Aligned_cols=528 Identities=20% Similarity=0.223 Sum_probs=469.3
Q ss_pred cEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEe
Q 002186 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (955)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ld 155 (955)
.++.++++++.+.+..|..+.. +++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|+.+++|++||
T Consensus 50 ~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 127 (680)
T 1ziw_A 50 QLTSLDVGFNTISKLEPELCQK--LPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLD 127 (680)
T ss_dssp TCSEEECCSSCCCCCCTTHHHH--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEE
T ss_pred cCcEEECCCCccCccCHHHHhc--ccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEE
Confidence 5778899999999887777777 89999999999999977667899999999999999999988888999999999999
Q ss_pred CCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcC--CCCCCcEEEccCCCCCCCCchhccCC-------------
Q 002186 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFG--SFKSLEFLHLAGNLLNDQIPAELGML------------- 220 (955)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~l~~l------------- 220 (955)
|++|.+++..|..++++++|++|+|++|.+++..|..++ .+++|++|++++|.+++..|..+..+
T Consensus 128 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l 207 (680)
T 1ziw_A 128 LSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL 207 (680)
T ss_dssp CCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCC
T ss_pred CCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhcccccc
Confidence 999999999999999999999999999999987777654 56899999999999999888877654
Q ss_pred --------------CCCcEEecccccccCCCCccccCCCC--CcEEeccCCCCCCCCCccccCCCCCCEEEecccccccc
Q 002186 221 --------------KTVTHMEIGYNFYQGNIPWQLGNMSE--VQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQ 284 (955)
Q Consensus 221 --------------~~L~~L~l~~n~l~g~~p~~~~~l~~--L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 284 (955)
++|+.|++++|.+.+..|..+.+++. |++|++++|.+++..|..++.+++|++|++++|++.+.
T Consensus 208 ~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 208 GPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEE
T ss_pred ChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCcc
Confidence 56778888888888888888888765 99999999999998899999999999999999999999
Q ss_pred CCccCcCCCccCEEEccCCCCCC-----CCCc----ccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcc
Q 002186 285 VPWEFSRVTTLKSLDLSDNRLSG-----PIPE----SFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (955)
Q Consensus 285 ~p~~~~~l~~L~~L~Ls~N~l~~-----~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 355 (955)
.|..|..+++|+.|++++|...+ .+|. .|..+++|+.|++++|++++..|..+..+++|++|++++|.+.+
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhh
Confidence 99999999999999999887654 2343 78899999999999999999999999999999999999998653
Q ss_pred c-C-CcccCC--CCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCC-cCccCCCCCcEEECcCCccccccc
Q 002186 356 S-L-PENLGR--NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLS-PSLSNCSSLVRLRLEDNSFSGEIP 430 (955)
Q Consensus 356 ~-~-p~~~~~--~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p 430 (955)
. + +..+.. .++|+.|++++|++++..|..+..+.+|+.|++++|.+.+.+| ..+.++++|++|++++|++.+..+
T Consensus 368 ~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 447 (680)
T 1ziw_A 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTR 447 (680)
T ss_dssp CEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCT
T ss_pred hhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeCh
Confidence 2 2 222332 3589999999999999889899999999999999999998776 678999999999999999999999
Q ss_pred hhccCCCCCCEEECCCCcCC--CCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCC----C--
Q 002186 431 LKFSQLPDINYIDLSRNGFT--GGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN----L-- 502 (955)
Q Consensus 431 ~~~~~l~~L~~L~Ls~N~l~--~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~----~-- 502 (955)
..|..+++|+.|++++|.+. +.+|..+..+++|++|++++| .+.+..|..+..+++|+.|++++|.+++. +
T Consensus 448 ~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N-~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 526 (680)
T 1ziw_A 448 NSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNN-NIANINDDMLEGLEKLEILDLQHNNLARLWKHANPG 526 (680)
T ss_dssp TTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSS-CCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTT
T ss_pred hhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCC-CCCcCChhhhccccccCEEeCCCCCccccchhhccC
Confidence 99999999999999999987 678999999999999999999 77777777788999999999999998753 1
Q ss_pred ---CCCCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcC-
Q 002186 503 ---PPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFG- 578 (955)
Q Consensus 503 ---p~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~- 578 (955)
..+..+++|+.|++++|+++...+..|.++++|+.|||++|++++..+..|..+++|+.|+|++|++++..|..|.
T Consensus 527 ~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 606 (680)
T 1ziw_A 527 GPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGP 606 (680)
T ss_dssp SCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHH
T ss_pred CcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcc
Confidence 2368899999999999999965556799999999999999999988888899999999999999999999988887
Q ss_pred CCCCCcEEECCCCcceeccCC-ccccccc
Q 002186 579 SCSSLTVLNVSFNDISGSIPS-GKVLRLM 606 (955)
Q Consensus 579 ~l~~L~~L~ls~N~l~g~ip~-~~~~~~~ 606 (955)
.+++|+.|++++|++.+.++. .+...+.
T Consensus 607 ~~~~L~~l~l~~N~~~c~c~~~~~~~~~~ 635 (680)
T 1ziw_A 607 AFRNLTELDMRFNPFDCTCESIAWFVNWI 635 (680)
T ss_dssp HHTTCSEEECTTCCCCBCCCCCSSEECCS
T ss_pred cccccCEEEccCCCcccCCccHHHHHHHH
Confidence 789999999999999999885 4444444
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-57 Score=548.85 Aligned_cols=426 Identities=22% Similarity=0.295 Sum_probs=322.2
Q ss_pred CChhhHHHHHHhhhhCCCCC--------CCCCCCCCCCCCCCCCCCCCccc---cceeecCCCCcEEEEEcCCCCCCccC
Q 002186 23 ANDPYSEALLSLKSELVDDF--------NSLHDWFVPPGVNPAGKIYACSW---SGVKCNKNNTIVVGINLSMKGLSGAL 91 (955)
Q Consensus 23 ~~~~~~~all~~k~~~~~~~--------~~l~~w~~~~~~~~~~~~~~c~w---~gv~C~~~~~~v~~l~l~~~~l~g~~ 91 (955)
+...|++||.++|+++.++. ....+|..+ .+||.| .||+|+. .++|+.++|+++++.|.+
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~--------~~~c~w~~~~GV~C~~-~~~V~~L~L~~~~l~g~l 97 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN--------KELDMWGAQPGVSLNS-NGRVTGLSLEGFGASGRV 97 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS--------SCGGGTTCCTTEEECT-TCCEEEEECTTSCCEEEE
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC--------CCcccccCCCCeEEcC-CCCEEEEEecCcccCCcC
Confidence 34568999999999986541 123467543 679999 9999987 489999999999999999
Q ss_pred CCCcchhcCCCCcEEECCCCcC------cc------cCCccccCCCCCCEEEccCCcCCccCCccccCC-----------
Q 002186 92 PGKPLRIFFNELVDLNLSHNSF------SG------QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSL----------- 148 (955)
Q Consensus 92 ~~~~~~~~l~~L~~L~Ls~n~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l----------- 148 (955)
|+.+.. +++|++|||++|.+ .| .+|... +.+|+ +++++|.+.+.+|..+..+
T Consensus 98 p~~l~~--L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~ 172 (636)
T 4eco_A 98 PDAIGQ--LTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQ 172 (636)
T ss_dssp CGGGGG--CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTS
T ss_pred ChHHhc--CccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccc
Confidence 999888 99999999999977 33 445444 56677 8888888888777666521
Q ss_pred --------CCCcEEeC--CCCCCCCCCchhhcCCCcceEEEecCCCCccc-----------------CCCCcC--CCCCC
Q 002186 149 --------RNLLVLDA--FSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP-----------------IPSQFG--SFKSL 199 (955)
Q Consensus 149 --------~~L~~LdL--~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~-----------------~p~~~~--~l~~L 199 (955)
..++.+.+ ..|+++| +|..++++++|++|+|++|.+++. +|..++ ++++|
T Consensus 173 ~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L 251 (636)
T 4eco_A 173 KSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDL 251 (636)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC
T ss_pred cccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCC
Confidence 12222222 2678888 888899999999999999999886 888888 99999
Q ss_pred cEEEccCCCCCCCCchhccCCCCCcEEeccccc-ccC-CCCccccCC------CCCcEEeccCCCCCCCCCc--cccCCC
Q 002186 200 EFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNF-YQG-NIPWQLGNM------SEVQYLDIAGANLSGSIPK--ELSNLT 269 (955)
Q Consensus 200 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~-l~g-~~p~~~~~l------~~L~~L~Ls~n~l~~~~p~--~l~~l~ 269 (955)
++|+|++|.+.+.+|..++++++|++|++++|. ++| .+|..++++ ++|++|++++|+++ .+|. .+++++
T Consensus 252 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~ 330 (636)
T 4eco_A 252 TDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMK 330 (636)
T ss_dssp CEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCT
T ss_pred CEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCC
Confidence 999999999989999999999999999999997 888 888888876 88999999999998 7887 888899
Q ss_pred CCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCC-CcEEecccccCCCCCccccCCCC--CccEE
Q 002186 270 KLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKN-LRLLSLMYNEMSGTVPESLVQLP--SLEIL 346 (955)
Q Consensus 270 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~l~~l~--~L~~L 346 (955)
+|++|++++|+++|.+| .|..+++|++|++++|+++ .+|..+..+++ |+.|++++|+++ .+|..+..++ +|+.|
T Consensus 331 ~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L 407 (636)
T 4eco_A 331 KLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAI 407 (636)
T ss_dssp TCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEE
T ss_pred CCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEE
Confidence 99999999999988888 8888889999999999888 67888888888 999999999888 6787776654 88888
Q ss_pred EccCCcCcccCCcccC-------CCCCCCeeecCCCcccccCCCCCCC-CCccceeeccCCCCCCCCCcC-ccC------
Q 002186 347 FIWNNYFSGSLPENLG-------RNSKLRWVDVSTNNFNGSIPPDICS-GGVLFKLILFSNNFTGSLSPS-LSN------ 411 (955)
Q Consensus 347 ~L~~N~l~~~~p~~~~-------~~~~L~~L~ls~N~l~g~ip~~~~~-~~~l~~l~l~~n~l~~~~p~~-~~~------ 411 (955)
++++|.+++.+|..+. .+.+|+.|++++|.++ .+|..++. +..|+.|++++|.++ .+|.. +..
T Consensus 408 ~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~ 485 (636)
T 4eco_A 408 DFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFK 485 (636)
T ss_dssp ECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECT
T ss_pred ECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhcccccccc
Confidence 8888888888888777 6667777777777776 55554432 455555566555555 33332 221
Q ss_pred -CCCCcEEECcCCccccccchhcc--CCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCC
Q 002186 412 -CSSLVRLRLEDNSFSGEIPLKFS--QLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNN 471 (955)
Q Consensus 412 -l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N 471 (955)
+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|++|++++|
T Consensus 486 ~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N 546 (636)
T 4eco_A 486 NTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQ 546 (636)
T ss_dssp TGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSC
T ss_pred ccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCC
Confidence 125666666666665 4555554 56666666666666665 5555555555555555555
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-56 Score=548.10 Aligned_cols=507 Identities=21% Similarity=0.277 Sum_probs=318.5
Q ss_pred CChhhHHHHHHhhhhCCCCCCCCCCCCCCCCCCCCCCCCCccc------------cceeecCCCCcEEEEEcCCCCCCcc
Q 002186 23 ANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSW------------SGVKCNKNNTIVVGINLSMKGLSGA 90 (955)
Q Consensus 23 ~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~c~w------------~gv~C~~~~~~v~~l~l~~~~l~g~ 90 (955)
+..+|++||++||+++.+| +|..+.+. +....++|+| .||+|+. .++|+.++|+++++.|.
T Consensus 266 ~~~~d~~ALl~~k~~l~~~-----~W~~~~~~-~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK-----NWRYYSGT-INNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG-----GCCCCCSS-CSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEE
T ss_pred cchHHHHHHHHHHHHcCCC-----CCCcCCCc-ccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCc
Confidence 3457899999999999876 89765211 1112234999 9999997 78999999999999999
Q ss_pred CCCCcchhcCCCCcEEEC-CCCcCcccCCccccCCC-CCCE--------------EE-ccCCcCCcc-----------CC
Q 002186 91 LPGKPLRIFFNELVDLNL-SHNSFSGQFPVEIFNLT-SLIS--------------LD-ISRNNFSGH-----------FP 142 (955)
Q Consensus 91 ~~~~~~~~~l~~L~~L~L-s~n~l~~~~p~~~~~l~-~L~~--------------L~-Ls~N~l~~~-----------~p 142 (955)
+|+.+.. +++|+.||| ++|.++|..|....... .+.. ++ .....+++. .+
T Consensus 339 ip~~l~~--L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 339 VPDAIGQ--LTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp ECGGGGG--CTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CchHHhc--cccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 9999888 899999999 89988887553311110 0000 00 000000000 01
Q ss_pred ccccCCCCCcEEeCCC--CCCCCCCchhhcCCCcceEEEecCCCCcc-----------------cCCCCcC--CCCCCcE
Q 002186 143 GGIQSLRNLLVLDAFS--NSFSGSVPAEISQLEHLKVLNLAGSYFSG-----------------PIPSQFG--SFKSLEF 201 (955)
Q Consensus 143 ~~~~~l~~L~~LdL~~--N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~-----------------~~p~~~~--~l~~L~~ 201 (955)
........++.+.+.. |.+++ +|..++++++|++|+|++|.+++ .+|..++ ++++|++
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred cccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 0111122233333322 55555 56666666666666666666665 2666655 6666666
Q ss_pred EEccCCCCCCCCchhccCCCCCcEEeccccc-ccC-CCCccccCCC-------CCcEEeccCCCCCCCCCc--cccCCCC
Q 002186 202 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNF-YQG-NIPWQLGNMS-------EVQYLDIAGANLSGSIPK--ELSNLTK 270 (955)
Q Consensus 202 L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~-l~g-~~p~~~~~l~-------~L~~L~Ls~n~l~~~~p~--~l~~l~~ 270 (955)
|+|++|.+.+.+|..++++++|+.|++++|. ++| .+|..+++++ +|++|++++|.++ .+|. .++++++
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~ 574 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVK 574 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTT
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCC
Confidence 6666666666666666666666666666665 665 5665555443 6666666666666 5665 6666666
Q ss_pred CCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCC-CcEEecccccCCCCCccccCCCCC--ccEEE
Q 002186 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKN-LRLLSLMYNEMSGTVPESLVQLPS--LEILF 347 (955)
Q Consensus 271 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~l~~l~~--L~~L~ 347 (955)
|++|+|++|+++ .+| .|..+++|+.|+|++|+++ .+|..+..+++ |+.|++++|+++ .+|..+..++. |+.|+
T Consensus 575 L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~ 650 (876)
T 4ecn_A 575 LGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVD 650 (876)
T ss_dssp CCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEE
T ss_pred CCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEE
Confidence 666666666666 555 6666666666666666666 56666666666 666666666666 55665555433 66666
Q ss_pred ccCCcCcccCCccc---C--CCCCCCeeecCCCcccccCCCCCC-CCCccceeeccCCCCCCCCCcCc--------cCCC
Q 002186 348 IWNNYFSGSLPENL---G--RNSKLRWVDVSTNNFNGSIPPDIC-SGGVLFKLILFSNNFTGSLSPSL--------SNCS 413 (955)
Q Consensus 348 L~~N~l~~~~p~~~---~--~~~~L~~L~ls~N~l~g~ip~~~~-~~~~l~~l~l~~n~l~~~~p~~~--------~~l~ 413 (955)
+++|.+++.+|... + .+.+|+.|++++|.++ .+|..++ .+..|+.|++++|++. .+|..+ .+|+
T Consensus 651 Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~ 728 (876)
T 4ecn_A 651 FSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTY 728 (876)
T ss_dssp CCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGG
T ss_pred CcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccC
Confidence 66666666554322 2 2235666666666666 4554443 3445555555555555 333322 2334
Q ss_pred CCcEEECcCCccccccchhcc--CCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccc
Q 002186 414 SLVRLRLEDNSFSGEIPLKFS--QLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNF 491 (955)
Q Consensus 414 ~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l 491 (955)
+|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|++++|+
T Consensus 729 ~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------------------- 787 (876)
T 4ecn_A 729 LLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------------------- 787 (876)
T ss_dssp GCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB-------------------
T ss_pred CccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC-------------------
Confidence 7888888888887 6677776 78888888888888876 67777777777777777772
Q ss_pred cCcccccCCCCCCCCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCcc
Q 002186 492 SASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSG 571 (955)
Q Consensus 492 ~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 571 (955)
+++.|++.+.+|..+.++++|+.|+|++|++ +.+|..+. ++|+.|||++|++..
T Consensus 788 -----------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 788 -----------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNIS 841 (876)
T ss_dssp -----------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCE
T ss_pred -----------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCc
Confidence 2345566666777777777777777777777 66776654 577777777777766
Q ss_pred ccCCCcCCCCCCcEEECCCCcc
Q 002186 572 QIPAKFGSCSSLTVLNVSFNDI 593 (955)
Q Consensus 572 ~~p~~~~~l~~L~~L~ls~N~l 593 (955)
..+..+.....+..+.+++|++
T Consensus 842 i~~~~~~~~~~~~~~~L~~n~~ 863 (876)
T 4ecn_A 842 IDVTSVCPYIEAGMYVLLYDKT 863 (876)
T ss_dssp EECGGGHHHHHTTCCEEECCTT
T ss_pred cChHHccccccchheeecCCCc
Confidence 6665555444445555555544
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-55 Score=543.11 Aligned_cols=519 Identities=21% Similarity=0.223 Sum_probs=307.3
Q ss_pred cccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccC-CccccCCCCCCEEEccCCcCCccCC
Q 002186 64 SWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQF-PVEIFNLTSLISLDISRNNFSGHFP 142 (955)
Q Consensus 64 ~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p 142 (955)
.|..|-+ ....++.++|+.+.+++..+..+.. +++|++|||++|.+.+.+ |.+|.++++|++|+|++|.+++..|
T Consensus 15 ~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~--l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 15 NLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPF--LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CSSCCCS--SCTTCCEEEEESCCCCEECSSSCSS--CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCC--CCCCcCEEECCCCcCCccChhHCcc--cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 4444444 1234455555555555544444444 555555555555443333 4455555555555555555555555
Q ss_pred ccccCCCCCcEEeCCCCCCCCCCchh--hcCCCcceEEEecCCCCcccCC-CCcCCCCCCcEEEccCCCCCCCCchhccC
Q 002186 143 GGIQSLRNLLVLDAFSNSFSGSVPAE--ISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLNDQIPAELGM 219 (955)
Q Consensus 143 ~~~~~l~~L~~LdL~~N~l~~~~p~~--~~~L~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 219 (955)
..|+++++|++|||++|.+++.+|.. +.++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 55555555555555555555544443 5555555555555555554433 34555555555555555555555555554
Q ss_pred C--CCCcEEecccccccCCCCccccCCCC------CcEEeccCCCCCCCCCccccCC---CCCCEEEeccc---------
Q 002186 220 L--KTVTHMEIGYNFYQGNIPWQLGNMSE------VQYLDIAGANLSGSIPKELSNL---TKLESLFLFRN--------- 279 (955)
Q Consensus 220 l--~~L~~L~l~~n~l~g~~p~~~~~l~~------L~~L~Ls~n~l~~~~p~~l~~l---~~L~~L~L~~N--------- 279 (955)
+ ++|+.|+++.|.+.+..|..++++.+ |++|++++|.+++.+|..+... ++++.|.++.+
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 4 55555555555555555544444433 5555555555555555444322 34444544422
Q ss_pred cccccCCccCcCC--CccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccC
Q 002186 280 QLAGQVPWEFSRV--TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL 357 (955)
Q Consensus 280 ~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 357 (955)
.+.+..+..|..+ ++|+.|++++|.+.+..|..|..+++|+.|++++|++++..|..+..+++|++|++++|.+++..
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 330 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELY 330 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccC
Confidence 1222222223332 56777777777777666677777777777777777777666667777777777777777777666
Q ss_pred CcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCC
Q 002186 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLP 437 (955)
Q Consensus 358 p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 437 (955)
|..+..+++|+.|++++|.+.+..+..+..+.+|+.|++++|.+++. ..+++|+.|++++|+++ .+|.. ..
T Consensus 331 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~ 401 (844)
T 3j0a_A 331 SSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NL 401 (844)
T ss_dssp SCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CT
T ss_pred HHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---cc
Confidence 67777777777777777777655555566666777777777776642 22566777777777776 33432 34
Q ss_pred CCCEEECCCCcCCCCCC-cchhhccCCcccccCCCCCCCCCCCc-ccCCCCccccccCcccccCCCC-----C-CCCcCC
Q 002186 438 DINYIDLSRNGFTGGIP-TDINQASKLEYFNVSNNPKLGGMIPA-QTWSLPSLQNFSASACNITGNL-----P-PFKSCK 509 (955)
Q Consensus 438 ~L~~L~Ls~N~l~~~ip-~~~~~~~~L~~L~ls~N~~l~~~~p~-~~~~l~~L~~l~ls~n~l~~~~-----p-~~~~~~ 509 (955)
+++.|++++|++++.-. ..+..+++|++|++++| .+.+..+. ....+++|+.|++++|.+++.. | .+..++
T Consensus 402 ~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~ 480 (844)
T 3j0a_A 402 TANLIHLSENRLENLDILYFLLRVPHLQILILNQN-RFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLS 480 (844)
T ss_dssp TCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESC-CCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBC
T ss_pred ccceeecccCccccCchhhhhhcCCccceeeCCCC-cccccccccccccCCccccccCCCCccccccccccchhhhcCcc
Confidence 56777777777765322 22346677777777777 44433222 2334667777777777765322 1 245667
Q ss_pred ccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECC
Q 002186 510 SISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVS 589 (955)
Q Consensus 510 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 589 (955)
+|+.|++++|++++.+|..+.++++|+.|+|++|++++..|..+. ++|+.|||++|++++.+|..|. +|+.|+++
T Consensus 481 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~ 555 (844)
T 3j0a_A 481 HLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDIT 555 (844)
T ss_dssp CEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEE
T ss_pred cccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEec
Confidence 777777777777777777777777777777777777766665554 6777777777777777776653 56777777
Q ss_pred CCcceeccCCcc
Q 002186 590 FNDISGSIPSGK 601 (955)
Q Consensus 590 ~N~l~g~ip~~~ 601 (955)
+|++.+.++...
T Consensus 556 ~Np~~C~c~~~~ 567 (844)
T 3j0a_A 556 HNKFICECELST 567 (844)
T ss_dssp EECCCCSSSCCS
T ss_pred CCCcccccccHH
Confidence 777777666443
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-54 Score=519.79 Aligned_cols=500 Identities=19% Similarity=0.166 Sum_probs=445.6
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCC
Q 002186 116 QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGS 195 (955)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~ 195 (955)
.+|..+. .++++|||++|.+++..|..|+.+++|++|||++|.+++..|..|.++++|++|+|++|.+++..|..|++
T Consensus 26 ~iP~~l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 103 (606)
T 3t6q_A 26 EIPGTLP--NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSG 103 (606)
T ss_dssp SCCTTSC--TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSS
T ss_pred cCcCCCC--CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcc
Confidence 4555554 37899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCC--E
Q 002186 196 FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLE--S 273 (955)
Q Consensus 196 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~--~ 273 (955)
+++|++|+|++|.+++..|..++.+++|++|++++|.+.+..+..+..+++|++|++++|.+++..|..++.+++|+ +
T Consensus 104 l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~ 183 (606)
T 3t6q_A 104 PKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLS 183 (606)
T ss_dssp CTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEE
T ss_pred cccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeE
Confidence 99999999999999988788999999999999999999984433444599999999999999988889999999999 8
Q ss_pred EEeccccccccCCccCcCCCccCEEEccCCCC--------------------------CCCCCcccCCCC--CCcEEecc
Q 002186 274 LFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL--------------------------SGPIPESFADLK--NLRLLSLM 325 (955)
Q Consensus 274 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l--------------------------~~~~p~~~~~l~--~L~~L~Ls 325 (955)
|++++|.+++..|..|.. .+|+.|++++|.. ....+..|..+. +|+.|+++
T Consensus 184 L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~ 262 (606)
T 3t6q_A 184 LNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQ 262 (606)
T ss_dssp EECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECT
T ss_pred EecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEee
Confidence 999999999988877655 6899999988751 011223333333 78999999
Q ss_pred cccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCC
Q 002186 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSL 405 (955)
Q Consensus 326 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~ 405 (955)
+|.+++..+..+..+++|++|++++|.++ .+|..+..+++|++|++++|.+.+..|..+...++|+.|++++|.+.+.+
T Consensus 263 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 341 (606)
T 3t6q_A 263 KHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLEL 341 (606)
T ss_dssp TCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBC
T ss_pred cCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCccccc
Confidence 99999988888999999999999999998 78889999999999999999999888888899999999999999999888
Q ss_pred CcC-ccCCCCCcEEECcCCcccccc--chhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCc-c
Q 002186 406 SPS-LSNCSSLVRLRLEDNSFSGEI--PLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPA-Q 481 (955)
Q Consensus 406 p~~-~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~-~ 481 (955)
|.. +..+++|++|++++|++++.. |..+..+++|++|++++|++.+..|..+..+++|++|++++| .+.+..|. .
T Consensus 342 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~~ 420 (606)
T 3t6q_A 342 GTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFT-RLKVKDAQSP 420 (606)
T ss_dssp CSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTC-CEECCTTCCT
T ss_pred chhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCC-cCCCcccchh
Confidence 765 899999999999999999876 788999999999999999999999999999999999999999 56665554 4
Q ss_pred cCCCCccccccCcccccCCCCCC-CCcCCccceEeccccccccc---cCCCCCcccccceeeeccccccccchhhhcCCC
Q 002186 482 TWSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGT---IPESVSNCVELERIDLANNKLIGSIPEVLARLP 557 (955)
Q Consensus 482 ~~~l~~L~~l~ls~n~l~~~~p~-~~~~~~l~~l~l~~N~l~g~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 557 (955)
+..+++|+.|++++|.+++..|. +..+++|+.|++++|.+++. .+..+..+++|+.|+|++|++++..|..++.++
T Consensus 421 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 500 (606)
T 3t6q_A 421 FQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLK 500 (606)
T ss_dssp TTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhcccc
Confidence 78899999999999999988776 48899999999999999873 336789999999999999999999999999999
Q ss_pred CCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCc-ccccccCCCccCCCCCCCCCC
Q 002186 558 VLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG-KVLRLMGSSAYAGNPKLCGAP 621 (955)
Q Consensus 558 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~lcg~~ 621 (955)
+|+.|+|++|++++.+|..|..+++| +|++++|++++..|.. ..+..+....+.+||..|.++
T Consensus 501 ~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 501 MMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp TCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999999999999999999999999 9999999999876654 445666777899999999754
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-54 Score=524.29 Aligned_cols=493 Identities=20% Similarity=0.182 Sum_probs=346.0
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
+.+++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|||++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 57899999999999888888999999999999999999888888999999999999999999888889999999999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCC-CCchhccCCCCCcEEecccccccCCCCccccCCCCCc----EEeccCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ----YLDIAGA 255 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~----~L~Ls~n 255 (955)
++|.+++..|..|+++++|++|++++|.+++ .+|..++++++|++|++++|.+.+..|..++.+++|+ +|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 9999988777889999999999999999876 6789999999999999999999888787777766654 8999999
Q ss_pred CCCCCCCccccCCCCCCEEEecccccc-ccCCccCcCCCccCEEEc---------------------------------c
Q 002186 256 NLSGSIPKELSNLTKLESLFLFRNQLA-GQVPWEFSRVTTLKSLDL---------------------------------S 301 (955)
Q Consensus 256 ~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L---------------------------------s 301 (955)
.+++..+..+... +|++|++++|.++ +..|..+.++++|+.+++ .
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence 9886655555544 8999999999876 344555666666666555 4
Q ss_pred CCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccC
Q 002186 302 DNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSI 381 (955)
Q Consensus 302 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~i 381 (955)
.|.+++.+|. +..+++|+.|++++|.+.. +| .+..+++|+.|++++|.+ +.+|. + .+++|+.|++++|...+.+
T Consensus 271 ~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp~-~-~l~~L~~L~l~~n~~~~~~ 344 (606)
T 3vq2_A 271 TNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFPT-L-DLPFLKSLTLTMNKGSISF 344 (606)
T ss_dssp CTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCCC-C-CCSSCCEEEEESCSSCEEC
T ss_pred cccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-ccccc-C-CCCccceeeccCCcCccch
Confidence 4555555554 6666666666666666643 34 566666666666666666 45553 3 6666666666666544433
Q ss_pred CCCCCCCCccceeeccCCCCCCC--CCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCC-cchh
Q 002186 382 PPDICSGGVLFKLILFSNNFTGS--LSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIP-TDIN 458 (955)
Q Consensus 382 p~~~~~~~~l~~l~l~~n~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip-~~~~ 458 (955)
.+..+++|+.|++++|.+++. +|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|++.+..| ..+.
T Consensus 345 --~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 421 (606)
T 3vq2_A 345 --KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFL 421 (606)
T ss_dssp --CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTT
T ss_pred --hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhh
Confidence 344555666666666666654 35556666666666666666654 44556666666666666666666555 4556
Q ss_pred hccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCC-CCC-CCcCCccceEeccccccccccCCCCCcccccc
Q 002186 459 QASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN-LPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELE 536 (955)
Q Consensus 459 ~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~-~p~-~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~ 536 (955)
.+++|++|++++| .+.+..|..+..+++|+.|++++|.+++. +|. +..+++|+.|++++|++++..|..+.++++|+
T Consensus 422 ~l~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 500 (606)
T 3vq2_A 422 SLEKLLYLDISYT-NTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQ 500 (606)
T ss_dssp TCTTCCEEECTTS-CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccccCCEEECcCC-CCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCC
Confidence 6666666666666 45555566666666666666666666652 333 35566666666666666666666666666666
Q ss_pred eeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCC-CCcEEECCCCcceeccCCcccccc
Q 002186 537 RIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCS-SLTVLNVSFNDISGSIPSGKVLRL 605 (955)
Q Consensus 537 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~g~ip~~~~~~~ 605 (955)
+|+|++|++++.+|..++.+++|++|||++|+++ .+|..+..++ +|++|++++|++.+.++..+..++
T Consensus 501 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~ 569 (606)
T 3vq2_A 501 LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQW 569 (606)
T ss_dssp EEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTHHHHTT
T ss_pred EEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccHHHHHH
Confidence 6666666666666666666666666666666666 3444455554 466666666666666555443333
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-54 Score=517.71 Aligned_cols=503 Identities=20% Similarity=0.200 Sum_probs=444.5
Q ss_pred EEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC
Q 002186 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (955)
Q Consensus 105 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~ 184 (955)
.++.+++.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|||++|.+++..|..|.++++|++|+|++|.
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 3555666665 4565554 899999999999999999999999999999999999999889999999999999999999
Q ss_pred CcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccC-CCCccccCCCCCcEEeccCCCCCCCCCc
Q 002186 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG-NIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (955)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g-~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 263 (955)
+++..|..|+++++|++|+|++|.+++..|..++.+++|++|++++|.+.+ .+|..++++++|++|++++|.+++..|.
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 999889999999999999999999998888899999999999999999986 6899999999999999999999998888
Q ss_pred cccCCCCCC----EEEeccccccccCCccCcCCCccCEEEccCCCCC-CCCCcccCCCCCCcEEec--------------
Q 002186 264 ELSNLTKLE----SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS-GPIPESFADLKNLRLLSL-------------- 324 (955)
Q Consensus 264 ~l~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L-------------- 324 (955)
.++.+++|+ +|++++|.+++..+..+... +|+.|++++|.++ +.+|..+..+++|+.+++
T Consensus 172 ~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~ 250 (606)
T 3vq2_A 172 DLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIF 250 (606)
T ss_dssp TTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred hhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccccc
Confidence 887776655 89999999998877777665 8999999999987 345666777777777665
Q ss_pred -------------------ccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCC
Q 002186 325 -------------------MYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDI 385 (955)
Q Consensus 325 -------------------s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~ 385 (955)
..|.+.+.+|. +..+++|+.|++++|.+. .+| .+..+++|+.|++++|.+ +.+| .+
T Consensus 251 ~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~ 325 (606)
T 3vq2_A 251 EPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL 325 (606)
T ss_dssp CGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC
T ss_pred ChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccc-cC
Confidence 55666766776 888999999999999996 466 888999999999999999 7899 45
Q ss_pred CCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccc--cchhccCCCCCCEEECCCCcCCCCCCcchhhccCC
Q 002186 386 CSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGE--IPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKL 463 (955)
Q Consensus 386 ~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L 463 (955)
.+..|+.|++++|...+.+ .+..+++|++|++++|++++. +|..+..+++|++|++++|.+++ +|..+..+++|
T Consensus 326 -~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L 401 (606)
T 3vq2_A 326 -DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEEL 401 (606)
T ss_dssp -CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTC
T ss_pred -CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCC
Confidence 8899999999999766554 577899999999999999977 48889999999999999999985 67889999999
Q ss_pred cccccCCCCCCCCCCC-cccCCCCccccccCcccccCCCCCC-CCcCCccceEecccccccc-ccCCCCCcccccceeee
Q 002186 464 EYFNVSNNPKLGGMIP-AQTWSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSG-TIPESVSNCVELERIDL 540 (955)
Q Consensus 464 ~~L~ls~N~~l~~~~p-~~~~~l~~L~~l~ls~n~l~~~~p~-~~~~~~l~~l~l~~N~l~g-~~p~~~~~l~~L~~L~L 540 (955)
++|++++| .+.+..| ..+..+++|+.|++++|.+++..|. +..+++|+.|++++|.+++ .+|..+.++++|+.|+|
T Consensus 402 ~~L~l~~n-~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L 480 (606)
T 3vq2_A 402 QHLDFQHS-TLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDL 480 (606)
T ss_dssp CEEECTTS-EEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred CeeECCCC-ccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEEC
Confidence 99999999 6767766 6788999999999999999998776 4889999999999999998 47999999999999999
Q ss_pred ccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCc-cccc-ccCCCccCCCCCCC
Q 002186 541 ANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG-KVLR-LMGSSAYAGNPKLC 618 (955)
Q Consensus 541 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~-~~~~-~~~~~~~~~n~~lc 618 (955)
++|++++.+|..++.+++|++|+|++|++++.+|..|..+++|++|++++|+++ .+|.. ..+. .+....+.+||..|
T Consensus 481 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c 559 (606)
T 3vq2_A 481 SKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVAC 559 (606)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCC
T ss_pred CCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCccc
Confidence 999999999999999999999999999999999999999999999999999999 56765 2222 24556789999999
Q ss_pred CCCC
Q 002186 619 GAPL 622 (955)
Q Consensus 619 g~~l 622 (955)
++++
T Consensus 560 ~c~~ 563 (606)
T 3vq2_A 560 ICEH 563 (606)
T ss_dssp SSTT
T ss_pred CCcc
Confidence 8764
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-53 Score=529.78 Aligned_cols=509 Identities=20% Similarity=0.183 Sum_probs=450.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccC-CccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF-PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L 178 (955)
.++|++|||++|.+++..|.+|.++++|++|||++|.+.+.+ |..|+++++|++|+|++|.+++..|..|+++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 468999999999999999999999999999999999776666 7889999999999999999999999999999999999
Q ss_pred EecCCCCcccCCCC--cCCCCCCcEEEccCCCCCCCCc-hhccCCCCCcEEecccccccCCCCccccCC--CCCcEEecc
Q 002186 179 NLAGSYFSGPIPSQ--FGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQLGNM--SEVQYLDIA 253 (955)
Q Consensus 179 ~Ls~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l--~~L~~L~Ls 253 (955)
+|++|.+++.+|.. |+++++|++|+|++|.+++..| ..++++++|++|++++|.+.+..|..+..+ ++|+.|+++
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 99999999877765 9999999999999999988765 689999999999999999999999999888 899999999
Q ss_pred CCCCCCCCCccccCCCC------CCEEEeccccccccCCccCcCC---CccCEEEccC---------CCCCCCCCcccCC
Q 002186 254 GANLSGSIPKELSNLTK------LESLFLFRNQLAGQVPWEFSRV---TTLKSLDLSD---------NRLSGPIPESFAD 315 (955)
Q Consensus 254 ~n~l~~~~p~~l~~l~~------L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~---------N~l~~~~p~~~~~ 315 (955)
+|.+.+..|..++.+++ |++|++++|.+++..+..+... +.++.|.++. |.+.+..+..|..
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 99999999888877766 9999999999998888776543 5788888873 3444444555665
Q ss_pred C--CCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccce
Q 002186 316 L--KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFK 393 (955)
Q Consensus 316 l--~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~ 393 (955)
+ ++|+.|++++|.+.+..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..|..+..+.+|+.
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 5 78999999999999988999999999999999999999999999999999999999999999888889999999999
Q ss_pred eeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCC
Q 002186 394 LILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPK 473 (955)
Q Consensus 394 l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~ 473 (955)
|++++|.+.+..+..|.++++|++|+|++|.+++. ..+++|+.|++++|+++ .+|.. ..++++|++++| .
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N-~ 412 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSEN-R 412 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSC-C
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---ccccceeecccC-c
Confidence 99999999998888999999999999999999853 33889999999999998 55654 467999999999 5
Q ss_pred CCCC-CCcccCCCCccccccCcccccCCCCCC--CCcCCccceEeccccccc-----cccCCCCCcccccceeeeccccc
Q 002186 474 LGGM-IPAQTWSLPSLQNFSASACNITGNLPP--FKSCKSISVIESHMNNLS-----GTIPESVSNCVELERIDLANNKL 545 (955)
Q Consensus 474 l~~~-~p~~~~~l~~L~~l~ls~n~l~~~~p~--~~~~~~l~~l~l~~N~l~-----g~~p~~~~~l~~L~~L~Ls~N~l 545 (955)
+.+. .+..+..+++|+.|++++|++++..+. +..+++|+.|++++|.++ +..|..+.++++|+.|+|++|++
T Consensus 413 l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 492 (844)
T 3j0a_A 413 LENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL 492 (844)
T ss_dssp CCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHH
T ss_pred cccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcc
Confidence 5443 334456899999999999999976554 356889999999999997 45567789999999999999999
Q ss_pred cccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCcccccccCCCccCCCCCCCCCCC
Q 002186 546 IGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSAYAGNPKLCGAPL 622 (955)
Q Consensus 546 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lcg~~l 622 (955)
++.+|..|..+++|+.|+|++|+|++..|..+. ++|++||+++|++++.+|.. +..+....+.+||..|++++
T Consensus 493 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 493 NSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp TTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSSC
T ss_pred cccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCccccccc
Confidence 999999999999999999999999998888877 89999999999999988854 55666778899999997764
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-50 Score=479.91 Aligned_cols=510 Identities=20% Similarity=0.199 Sum_probs=428.7
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
..++.|||++|.+++..+.+|.++++|++|||++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46899999999999999999999999999999999999988899999999999999999999888899999999999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCC-CCchhccCCCCCcEEecccccccCCCCccccCCCCC----cEEeccCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV----QYLDIAGA 255 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L----~~L~Ls~n 255 (955)
++|.+++..+..|+++++|++|++++|.+++ .+|..++++++|++|++++|.+.+..|..++++++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999997766689999999999999999987 579999999999999999999998888888888888 89999999
Q ss_pred CCCCCCCccccCCCCCCEEEeccccccc-cCCccCcCCCccCEEEccCCCC------CCCCCcccCCCCC--CcEEeccc
Q 002186 256 NLSGSIPKELSNLTKLESLFLFRNQLAG-QVPWEFSRVTTLKSLDLSDNRL------SGPIPESFADLKN--LRLLSLMY 326 (955)
Q Consensus 256 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l------~~~~p~~~~~l~~--L~~L~Ls~ 326 (955)
.+.+..|..+..+ +|+.|++++|.... .++..+..+++++.+.+..+.+ .......+..+.+ ++.+++++
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 9998888777765 79999999885432 2233455666666655442222 2222233444443 45677777
Q ss_pred c-cCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCC
Q 002186 327 N-EMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSL 405 (955)
Q Consensus 327 N-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~ 405 (955)
+ .+.+..|..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.+. .+|. .....|+.+.+.+|.+.+..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccc
Confidence 7 677788888888899999999999887 578888888 8999999999887 6665 35678899999999888777
Q ss_pred CcCccCCCCCcEEECcCCcccccc--chhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCC-ccc
Q 002186 406 SPSLSNCSSLVRLRLEDNSFSGEI--PLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIP-AQT 482 (955)
Q Consensus 406 p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p-~~~ 482 (955)
+. ..+++|++|++++|++++.. |..+..+++|++|++++|.+.+..+. +..+++|++|++++| .+.+..| ..+
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n-~l~~~~~~~~~ 417 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHS-NLKQMSEFSVF 417 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTS-EEESCTTSCTT
T ss_pred cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCC-ccccccchhhh
Confidence 65 67899999999999998764 77888999999999999999865444 888999999999999 5555555 467
Q ss_pred CCCCccccccCcccccCCCCCC-CCcCCccceEeccccccc-cccCCCCCcccccceeeeccccccccchhhhcCCCCCc
Q 002186 483 WSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLS-GTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLG 560 (955)
Q Consensus 483 ~~l~~L~~l~ls~n~l~~~~p~-~~~~~~l~~l~l~~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 560 (955)
..+++|+.|++++|.+++..|. +..+++|+.|++++|.++ +.+|..+..+++|+.|+|++|++++..|..+..+++|+
T Consensus 418 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 497 (570)
T 2z63_A 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497 (570)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCC
Confidence 7889999999999999887775 478999999999999998 68999999999999999999999999999999999999
Q ss_pred EEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCcccc-cccCC--CccCCCCCCCCCC
Q 002186 561 VLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVL-RLMGS--SAYAGNPKLCGAP 621 (955)
Q Consensus 561 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~-~~~~~--~~~~~n~~lcg~~ 621 (955)
+|+|++|++++..|..|..+++|++|++++|+++|.+|....+ .++.. ..+.+.+ .|..|
T Consensus 498 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 498 VLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGS 560 (570)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTT
T ss_pred EEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCCC
Confidence 9999999999999999999999999999999999999987655 44432 2344454 66544
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-50 Score=480.05 Aligned_cols=490 Identities=19% Similarity=0.180 Sum_probs=362.4
Q ss_pred CccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccC
Q 002186 62 ACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF 141 (955)
Q Consensus 62 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 141 (955)
.|.|.|+ |+..... ++ .+|+.+ .++|++|||++|.+++..|.+|.++++|++|+|++|++++..
T Consensus 3 ~C~~~~~-c~~~~~~----------l~-~ip~~~----~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~ 66 (549)
T 2z81_A 3 SCDASGV-CDGRSRS----------FT-SIPSGL----TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIE 66 (549)
T ss_dssp EECTTSE-EECTTSC----------CS-SCCSCC----CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEEC
T ss_pred cCCCCce-EECCCCc----------cc-cccccC----CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccC
Confidence 5999999 8763322 22 344433 368999999999999999999999999999999999999999
Q ss_pred CccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcc-cCCCCcCCCCCCcEEEccCCCCCCCCc-hhccC
Q 002186 142 PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGM 219 (955)
Q Consensus 142 p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~ 219 (955)
|+.|+.+++|++|||++|.+++..|..|+++++|++|+|++|.+++ ..|..|+++++|++|++++|.+.+.+| ..+..
T Consensus 67 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~ 146 (549)
T 2z81_A 67 GDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAG 146 (549)
T ss_dssp TTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT
T ss_pred hhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhc
Confidence 9999999999999999999998888889999999999999999987 467889999999999999998555555 67899
Q ss_pred CCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCcc-ccCCCCCCEEEeccccccccC--C-ccCcCCCcc
Q 002186 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLAGQV--P-WEFSRVTTL 295 (955)
Q Consensus 220 l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~--p-~~~~~l~~L 295 (955)
+++|++|++++|.+.+.+|..++++++|++|+++.|.+.. +|.. +..+++|++|++++|++++.. | .....+++|
T Consensus 147 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L 225 (549)
T 2z81_A 147 LTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF-LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPM 225 (549)
T ss_dssp CCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT-HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCC
T ss_pred ccccCeeeccCCcccccChhhhhccccCceEecccCcccc-cchhhHhhcccccEEEccCCccccccccccchhhhhhcc
Confidence 9999999999999998889999999999999999888763 4443 456888999999998888742 1 123456778
Q ss_pred CEEEccCCCCCCCCC----cccCCCCCCcEEecccccCCCCC------ccccCCCCCccEEEccCCcCcccC-----Ccc
Q 002186 296 KSLDLSDNRLSGPIP----ESFADLKNLRLLSLMYNEMSGTV------PESLVQLPSLEILFIWNNYFSGSL-----PEN 360 (955)
Q Consensus 296 ~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~------p~~l~~l~~L~~L~L~~N~l~~~~-----p~~ 360 (955)
+.|++++|.+++..+ ..+..+++|+.+++++|.+.+.. ...+..+++|+.|++.++.+.... +..
T Consensus 226 ~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~ 305 (549)
T 2z81_A 226 KKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTV 305 (549)
T ss_dssp CEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHH
T ss_pred cceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhh
Confidence 888888887765433 33456677888888877766531 123445566666666666543211 001
Q ss_pred cCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCc-cCCCCCcEEECcCCccccccch---hccCC
Q 002186 361 LGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSL-SNCSSLVRLRLEDNSFSGEIPL---KFSQL 436 (955)
Q Consensus 361 ~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~---~~~~l 436 (955)
+....+| +.+++++|.+. .+|..+ ..+++|++|++++|++++.+|. .++.+
T Consensus 306 ~~~~~~L------------------------~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l 360 (549)
T 2z81_A 306 YSLLEKV------------------------KRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAW 360 (549)
T ss_dssp HHHSTTC------------------------CEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSS
T ss_pred hhhcccc------------------------eEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhcc
Confidence 1112344 44445554443 334333 3566666666666666665532 25566
Q ss_pred CCCCEEECCCCcCCCCCC--cchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceE
Q 002186 437 PDINYIDLSRNGFTGGIP--TDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVI 514 (955)
Q Consensus 437 ~~L~~L~Ls~N~l~~~ip--~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l 514 (955)
++|++|++++|++++..+ ..+..+++|++|++++| .+. .+|..+..+++|+.|++++|.++.. |.. ..++|+.|
T Consensus 361 ~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N-~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l-~~~-~~~~L~~L 436 (549)
T 2z81_A 361 PSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRN-TFH-PMPDSCQWPEKMRFLNLSSTGIRVV-KTC-IPQTLEVL 436 (549)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTC-CCC-CCCSCCCCCTTCCEEECTTSCCSCC-CTT-SCTTCSEE
T ss_pred ccCcEEEccCCcccccccchhhhhcCCCCCEEECCCC-CCc-cCChhhcccccccEEECCCCCcccc-cch-hcCCceEE
Confidence 666666666666654322 33556666666666666 443 4565666666677777777766532 211 12578999
Q ss_pred eccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcce
Q 002186 515 ESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDIS 594 (955)
Q Consensus 515 ~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 594 (955)
++++|++++.+ ..+++|++|+|++|+++ .+|. ...+++|++|||++|++++.+|..|..+++|++|++++|+++
T Consensus 437 ~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 510 (549)
T 2z81_A 437 DVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510 (549)
T ss_dssp ECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBC
T ss_pred ECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCcc
Confidence 99999998753 57899999999999998 6776 468999999999999999999999999999999999999999
Q ss_pred eccCCcccc
Q 002186 595 GSIPSGKVL 603 (955)
Q Consensus 595 g~ip~~~~~ 603 (955)
|.+|....+
T Consensus 511 ~~~~~~~~l 519 (549)
T 2z81_A 511 CSCPRIDYL 519 (549)
T ss_dssp CCHHHHHHH
T ss_pred CCCccHHHH
Confidence 999854333
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-51 Score=494.45 Aligned_cols=505 Identities=17% Similarity=0.206 Sum_probs=331.6
Q ss_pred ChhhHHHHHHhhhhCCCCCCCCCCCCCCCCCCCCCCCCCcccc-ceeecCCC---CcEEEEEcCCCCCCccCCCCcchhc
Q 002186 24 NDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWS-GVKCNKNN---TIVVGINLSMKGLSGALPGKPLRIF 99 (955)
Q Consensus 24 ~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~c~w~-gv~C~~~~---~~v~~l~l~~~~l~g~~~~~~~~~~ 99 (955)
..++...-.++++-...-.+ ..|...... ....|.|. +..|+. + .+|+|-.
T Consensus 25 ~~~~~~d~~aL~~~~~~~~~--~~w~~~~~~----~~~~~~W~~~~~~c~-w~~~~GV~C~~------------------ 79 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDALNG--KNWSQQGFG----TQPGANWNFNKELDM-WGAQPGVSLNS------------------ 79 (636)
T ss_dssp CCHHHHHHHHHHHHHHHTTG--GGCCCCC----------CCCCCSSCGGG-TTCCTTEEECT------------------
T ss_pred hhhHHHHHHHHHHHHHHcCC--CCcccCCcC----CccCCCCCCCCCccc-ccCCCCeEEcC------------------
Confidence 33444555555544443322 367643111 12246896 444544 5 5788721
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcC------Cc------cCCccccCCCCCcEEeCCCCCCCCCCch
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNF------SG------HFPGGIQSLRNLLVLDAFSNSFSGSVPA 167 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l------~~------~~p~~~~~l~~L~~LdL~~N~l~~~~p~ 167 (955)
-.+++.|+|++|.++|.+|++|++|++|++|||++|.+ .+ .+|... +..|+ ++++.|.+.+.+|.
T Consensus 80 ~~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~ 156 (636)
T 4eco_A 80 NGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRE 156 (636)
T ss_dssp TCCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGG
T ss_pred CCCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchh
Confidence 13589999999999999999999999999999999986 23 344433 55666 78888888877776
Q ss_pred hhcC-CCcceEEEecCCCCcccCCCCcCCCCCCcEEEcc--CCCCCCCCchhccCCCCCcEEecccccccCC--------
Q 002186 168 EISQ-LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA--GNLLNDQIPAELGMLKTVTHMEIGYNFYQGN-------- 236 (955)
Q Consensus 168 ~~~~-L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~--~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~-------- 236 (955)
.+.. +..+..+++....+.. .....++.+.+. +|++++ +|..++++++|++|++++|.++|.
T Consensus 157 ~~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 229 (636)
T 4eco_A 157 DFSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWEN 229 (636)
T ss_dssp GSCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC
T ss_pred hHHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccc
Confidence 6652 2223333332111110 011111111121 344444 455555555555555555555543
Q ss_pred ---------CCcccc--CCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccc-ccc-cCCccCcCC------CccCE
Q 002186 237 ---------IPWQLG--NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ-LAG-QVPWEFSRV------TTLKS 297 (955)
Q Consensus 237 ---------~p~~~~--~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~ 297 (955)
+|..++ ++++|++|++++|.+.+.+|..++++++|++|++++|+ ++| .+|..+..+ ++|++
T Consensus 230 ~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~ 309 (636)
T 4eco_A 230 ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQI 309 (636)
T ss_dssp TTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCE
T ss_pred cccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCE
Confidence 666666 66666666666666666666666666666666666666 666 566555554 66777
Q ss_pred EEccCCCCCCCCCc--ccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCC-CCeeecCC
Q 002186 298 LDLSDNRLSGPIPE--SFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSK-LRWVDVST 374 (955)
Q Consensus 298 L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~-L~~L~ls~ 374 (955)
|++++|+++ .+|. .++.+++|+.|++++|+++|.+| .+..+++|+.|++++|.++ .+|..+..+++ |+.|++++
T Consensus 310 L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~ 386 (636)
T 4eco_A 310 IYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAH 386 (636)
T ss_dssp EECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCS
T ss_pred EECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccC
Confidence 777777776 5666 67777777777777777776666 6666777777777777776 66666777776 77777777
Q ss_pred CcccccCCCCCCCCC--ccceeeccCCCCCCCCCcCcc-------CCCCCcEEECcCCccccccchhccCCCCCCEEECC
Q 002186 375 NNFNGSIPPDICSGG--VLFKLILFSNNFTGSLSPSLS-------NCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLS 445 (955)
Q Consensus 375 N~l~g~ip~~~~~~~--~l~~l~l~~n~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 445 (955)
|.++ .+|..+.... +|+.|++++|.+.+.+|..+. .+++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 387 N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls 465 (636)
T 4eco_A 387 NKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLM 465 (636)
T ss_dssp SCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECC
T ss_pred CcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECC
Confidence 7776 6666655443 677777777777777777766 77889999999999985444456678999999999
Q ss_pred CCcCCCCCCcchhh-c-------cCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceEecc
Q 002186 446 RNGFTGGIPTDINQ-A-------SKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESH 517 (955)
Q Consensus 446 ~N~l~~~ip~~~~~-~-------~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l~ 517 (955)
+|+++ .+|..+.. . ++|++|++++| .+. .+|..+. ...+++|+.|+++
T Consensus 466 ~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N-~l~-~lp~~~~---------------------~~~l~~L~~L~Ls 521 (636)
T 4eco_A 466 GNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFN-KLT-KLSDDFR---------------------ATTLPYLVGIDLS 521 (636)
T ss_dssp SSCCS-BCCSSSSEETTEECTTGGGCCEEECCSS-CCC-BCCGGGS---------------------TTTCTTCCEEECC
T ss_pred CCCCC-CcCHHHhccccccccccCCccEEECcCC-cCC-ccChhhh---------------------hccCCCcCEEECC
Confidence 99998 56654332 2 27777777777 443 4444443 0134455556666
Q ss_pred ccccccccCCCCCcccccceeee------ccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCC
Q 002186 518 MNNLSGTIPESVSNCVELERIDL------ANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFN 591 (955)
Q Consensus 518 ~N~l~g~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 591 (955)
+|++++ +|..+.++++|+.|+| ++|++.+.+|..+..+++|++|+|++|++ +.+|..+. ++|++||+++|
T Consensus 522 ~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N 597 (636)
T 4eco_A 522 YNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDN 597 (636)
T ss_dssp SSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSC
T ss_pred CCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCC
Confidence 666665 6777777777788777 56888999999999999999999999999 67888766 79999999999
Q ss_pred ccee
Q 002186 592 DISG 595 (955)
Q Consensus 592 ~l~g 595 (955)
++..
T Consensus 598 ~l~~ 601 (636)
T 4eco_A 598 PNIS 601 (636)
T ss_dssp TTCE
T ss_pred CCcc
Confidence 8874
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=467.88 Aligned_cols=489 Identities=19% Similarity=0.183 Sum_probs=423.8
Q ss_pred CcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEE
Q 002186 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154 (955)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 154 (955)
..+..++++++.+.+..+..+.. +++|++|||++|.+++..|..|.++++|++|+|++|.+++..|..|+.+++|++|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFS--FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTT--CSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred ccccEEEccCCccCccChhHhhC--CCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccc
Confidence 35788999999998877666666 8999999999999999889999999999999999999999989999999999999
Q ss_pred eCCCCCCCCCCchhhcCCCcceEEEecCCCCcc-cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCC----cEEecc
Q 002186 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV----THMEIG 229 (955)
Q Consensus 155 dL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L----~~L~l~ 229 (955)
++++|.+++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|.+++..|..++.+++| +.++++
T Consensus 106 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~ 185 (570)
T 2z63_A 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 185 (570)
T ss_dssp ECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECT
T ss_pred cccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccC
Confidence 999999997766679999999999999999987 579999999999999999999999888889988888 899999
Q ss_pred cccccCCCCccccCCCCCcEEeccCCCCCC-CCCccccCCCCCCEEEecccccc------ccCCccCcCCC--ccCEEEc
Q 002186 230 YNFYQGNIPWQLGNMSEVQYLDIAGANLSG-SIPKELSNLTKLESLFLFRNQLA------GQVPWEFSRVT--TLKSLDL 300 (955)
Q Consensus 230 ~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~-~~p~~l~~l~~L~~L~L~~N~l~------~~~p~~~~~l~--~L~~L~L 300 (955)
+|.+.+..|..+..+ +|+.|++++|.... .++..+..+++++.+.+..+.+. ......+..+. .++.+++
T Consensus 186 ~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 264 (570)
T 2z63_A 186 LNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264 (570)
T ss_dssp TCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEE
T ss_pred CCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhh
Confidence 999998888777666 89999999985442 34556777888887766543322 22223344443 3567778
Q ss_pred cCC-CCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccc
Q 002186 301 SDN-RLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379 (955)
Q Consensus 301 s~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g 379 (955)
+.| .+.+.+|..|..+++|+.|++++|.+. .+|..+..+ +|+.|++++|.+. .+|. ..+++|+.|++++|.+.+
T Consensus 265 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~ 339 (570)
T 2z63_A 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGN 339 (570)
T ss_dssp EETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCC
T ss_pred hcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccc
Confidence 777 777888899999999999999999988 578888888 9999999999988 5665 477889999999999887
Q ss_pred cCCCCCCCCCccceeeccCCCCCCCC--CcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCC-cc
Q 002186 380 SIPPDICSGGVLFKLILFSNNFTGSL--SPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIP-TD 456 (955)
Q Consensus 380 ~ip~~~~~~~~l~~l~l~~n~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip-~~ 456 (955)
.++. ...+.|+.|++++|.+++.. |..+..+++|++|++++|++++..+. +..+++|++|++++|.+.+..| ..
T Consensus 340 ~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~ 416 (570)
T 2z63_A 340 AFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSV 416 (570)
T ss_dssp BCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCT
T ss_pred cccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhh
Confidence 7665 56788999999999988764 67788999999999999999976655 9999999999999999998776 56
Q ss_pred hhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccC-CCCCC-CCcCCccceEeccccccccccCCCCCcccc
Q 002186 457 INQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNIT-GNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVE 534 (955)
Q Consensus 457 ~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~-~~~p~-~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~ 534 (955)
+..+++|++|++++| .+.+..|..+..+++|+.|++++|.++ +.+|. +..+++|+.|++++|++++..|..+.++++
T Consensus 417 ~~~l~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 495 (570)
T 2z63_A 417 FLSLRNLIYLDISHT-HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 495 (570)
T ss_dssp TTTCTTCCEEECTTS-CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhcCCCCCEEeCcCC-cccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccC
Confidence 888999999999999 777888888899999999999999998 56664 588999999999999999999999999999
Q ss_pred cceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCC
Q 002186 535 LERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPA 575 (955)
Q Consensus 535 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 575 (955)
|+.|+|++|++++..|..+..+++|+.|++++|.+++..|.
T Consensus 496 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 496 LQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999999999999999999999999999999999988775
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=431.77 Aligned_cols=245 Identities=17% Similarity=0.199 Sum_probs=197.6
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
..++||+|+||+||||++ .+++.||||+++... ...+.|.+|++++++++|||||+++|+|.+++..+||||
T Consensus 30 ~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEE
Confidence 457899999999999985 357899999997532 235789999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceE
Q 002186 767 YLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828 (955)
Q Consensus 767 y~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki 828 (955)
||++|||.++|+. .++|.++.+|+.|||+||+|||+. +||||||||+|||+|+++.+||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCEEE
Confidence 9999999999953 368999999999999999999998 9999999999999999999999
Q ss_pred CcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccc
Q 002186 829 AEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 903 (955)
Q Consensus 829 ~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 903 (955)
+|||+++....... ....++..|++||+.....++.++|||||||++|||+| |+.||.+.... +.+..+
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~------~~~~~i 260 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ------DVVEMI 260 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH------HHHHHH
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH------HHHHHH
Confidence 99999986543221 12235556889999999999999999999999999999 77887643211 111111
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 904 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
......+.+ .++...+.+++.+||+.||++||||+||+++|+...
T Consensus 261 ~~~~~~~~p---~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 261 RNRQVLPCP---DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HcCCCCCCc---ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 111111111 233456778999999999999999999999998753
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-50 Score=430.76 Aligned_cols=245 Identities=18% Similarity=0.220 Sum_probs=197.1
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||+||+|+. .+|+.||||+++... ...+.|.+|+++|++++|||||+++|+|.+++..||||||
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence 567899999999999985 358899999997643 3466799999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc---------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccc
Q 002186 768 LPNGNLSEKIRT---------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 832 (955)
Q Consensus 768 ~~~gsL~~~l~~---------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfG 832 (955)
|++|||.++|+. .++|.++.+|+.|||+||+|||+. +||||||||+|||++.++.+||+|||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCS
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECCcc
Confidence 999999999964 468999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccccccc
Q 002186 833 FKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNEN 907 (955)
Q Consensus 833 l~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (955)
+|+....... ....++..|++||+.....++.++|||||||++|||+| |+.||.+.... +.+..+....
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~------~~~~~i~~~~ 247 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------EVIECITQGR 247 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHHHTC
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHHHcCC
Confidence 9986543321 11224566889999999999999999999999999999 88888643211 1111111111
Q ss_pred ccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 908 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
....++ ....++.+++.+||+.||++||||+||++.|+++.
T Consensus 248 ~~~~p~---~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 248 VLQRPR---TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp CCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 111111 23356778999999999999999999999998763
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-50 Score=437.03 Aligned_cols=245 Identities=17% Similarity=0.196 Sum_probs=193.3
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..++||+|+||+||+|+. .+|+.||||+++... ...+.|.+|+++|++++|||||+++|+|.+++..||||||
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 567899999999999984 358899999997643 3456799999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECc
Q 002186 768 LPNGNLSEKIRT-----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830 (955)
Q Consensus 768 ~~~gsL~~~l~~-----------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~D 830 (955)
|++|||.++++. .++|.++.+|+.|||+||+|||+. +||||||||+|||++.++.+||+|
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEcc
Confidence 999999999964 368999999999999999999998 999999999999999999999999
Q ss_pred ccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccccc
Q 002186 831 FGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 831 fGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
||+++....... ....++..|++||+..+..++.++|||||||++|||+| |+.||.+.... +.+..+..
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~------~~~~~i~~ 275 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT------EAIDCITQ 275 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH------HHHHHHHH
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH------HHHHHHHc
Confidence 999986543221 11234566889999999999999999999999999999 88888643211 11111111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
......+. ....++.+++.+||+.||++||||+||+++|+.+.
T Consensus 276 g~~~~~p~---~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 276 GRELERPR---ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp TCCCCCCT---TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCCcc---cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 11111111 23356778999999999999999999999998764
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-49 Score=427.43 Aligned_cols=247 Identities=17% Similarity=0.228 Sum_probs=192.9
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||+||+|+..+ .||||+++... ...+.|.+|++++++++|||||+++|+|.+ +..+||||||++|
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gG 116 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGS 116 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSC
T ss_pred EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCC
Confidence 56789999999999999753 59999987532 235678999999999999999999999865 5689999999999
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC----CC
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----SF 844 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~----~~ 844 (955)
||.++|+. .++|.++..|+.|||+||+|||+. +||||||||+|||+++++.+||+|||+|+....... ..
T Consensus 117 sL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~ 193 (307)
T 3omv_A 117 SLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193 (307)
T ss_dssp BHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC------------
T ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecc
Confidence 99999964 578999999999999999999998 999999999999999999999999999986543221 12
Q ss_pred cccccccCchhhhhc---cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 845 PAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~---~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
..+++.|++||+... .+++.++|||||||++|||+||+.||.+..... ............+. . .....+....
T Consensus 194 ~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~~~~~p~-~--~~~~~~~~~~ 269 (307)
T 3omv_A 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGYASPD-L--SKLYKNCPKA 269 (307)
T ss_dssp CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHTTCCCCC-S--TTSCTTSCHH
T ss_pred cccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCCCCCC-c--ccccccchHH
Confidence 235677889998864 358999999999999999999999997433211 01101111111111 1 1111233456
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
+.+++.+||+.||++||||+||+++|+.++
T Consensus 270 l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 270 MKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp HHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 778999999999999999999999988764
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-49 Score=431.08 Aligned_cols=256 Identities=20% Similarity=0.240 Sum_probs=197.3
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCC----eeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv~ey~~~ 770 (955)
..+.||+|+||+||+|+. +|+.||||+++........++.|+..+.+++|||||+++|+|.+++ ..|||||||++
T Consensus 7 L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 567899999999999997 6999999999765444444556777778899999999999998654 57999999999
Q ss_pred CChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcC-----CCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 771 GNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHD-----CYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 771 gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~-----~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
|||.++|+. ..+|.++.+++.|+|+||+|||+. +.++||||||||+|||+|.++++||+|||+++........
T Consensus 86 gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 165 (303)
T 3hmm_A 86 GSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 165 (303)
T ss_dssp CBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEE
T ss_pred CcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCce
Confidence 999999976 679999999999999999999986 3569999999999999999999999999999865433211
Q ss_pred -----CcccccccCchhhhhcc------CCcccccchhHHHHHHHHHhCCCCCCCCCCCC----Ccc-----cccc----
Q 002186 844 -----FPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ----NKP-----IDGL---- 899 (955)
Q Consensus 844 -----~~~~~~~~~~~e~~~~~------~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~----~~~-----~~~~---- 899 (955)
...++++|++||+..+. .++.++||||||||+|||+||+.|+......+ ... ....
T Consensus 166 ~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 245 (303)
T 3hmm_A 166 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV 245 (303)
T ss_dssp SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH
T ss_pred eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHH
Confidence 12367778999988653 46788999999999999999988775322111 000 0000
Q ss_pred ccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 900 LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
..+..++. ++......+....+.+++.+||+.||++||||+||+++|+++.+
T Consensus 246 ~~~~~rp~-~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 246 CEQKLRPN-IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TTSCCCCC-CCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcccCCCC-CCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 11111111 11011123456678899999999999999999999999987743
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=467.01 Aligned_cols=444 Identities=21% Similarity=0.252 Sum_probs=344.4
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEc-cCCcCCccCCccccCCC-CCc--------------EEeC-CCCCCCC
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDI-SRNNFSGHFPGGIQSLR-NLL--------------VLDA-FSNSFSG 163 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~~p~~~~~l~-~L~--------------~LdL-~~N~l~~ 163 (955)
.+++.|+|++|.+.|.+|++|++|++|++||| ++|.++|..|-.-.... .+. .++. ....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 36899999999999999999999999999999 99999887553211110 000 0000 0011111
Q ss_pred C-----------CchhhcCCCcceEEEecC--CCCcccCCCCcCCCCCCcEEEccCCCCCC-----------------CC
Q 002186 164 S-----------VPAEISQLEHLKVLNLAG--SYFSGPIPSQFGSFKSLEFLHLAGNLLND-----------------QI 213 (955)
Q Consensus 164 ~-----------~p~~~~~L~~L~~L~Ls~--n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~ 213 (955)
. .+........++.+.++. |.+++ +|..|+++++|++|+|++|.+++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 1 111112333455555554 88998 89999999999999999999998 49
Q ss_pred chhcc--CCCCCcEEecccccccCCCCccccCCCCCcEEeccCCC-CCC-CCCccccCCC-------CCCEEEecccccc
Q 002186 214 PAELG--MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGAN-LSG-SIPKELSNLT-------KLESLFLFRNQLA 282 (955)
Q Consensus 214 p~~l~--~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l~ 282 (955)
|..++ ++++|++|++++|.+.+.+|..++++++|++|++++|+ ++| .+|..+++++ +|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 99988 99999999999999999999999999999999999998 998 8888776655 9999999999999
Q ss_pred ccCCc--cCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCC-ccEEEccCCcCcccCCc
Q 002186 283 GQVPW--EFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS-LEILFIWNNYFSGSLPE 359 (955)
Q Consensus 283 ~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~L~~N~l~~~~p~ 359 (955)
.+|. .|.++++|+.|+|++|+++ .+| .|+.+++|+.|++++|+++ .+|..+..+++ |+.|++++|.++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 7888 8999999999999999999 788 8999999999999999999 89999999999 999999999998 7888
Q ss_pred ccCCCCC--CCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchh-ccCC
Q 002186 360 NLGRNSK--LRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLK-FSQL 436 (955)
Q Consensus 360 ~~~~~~~--L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l 436 (955)
.+...+. |+.|++++|.+.|.+|...+... ...+++|+.|+|++|+++. +|.. +..+
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~-------------------~~~~~~L~~L~Ls~N~L~~-lp~~~~~~l 696 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMD-------------------DYKGINASTVTLSYNEIQK-FPTELFATG 696 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTT-------------------TCCCCCEEEEECCSSCCCS-CCHHHHHTT
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhc-------------------cccCCCcCEEEccCCcCCc-cCHHHHccC
Confidence 8877654 99999999999887664221110 1124578888888888884 4444 4578
Q ss_pred CCCCEEECCCCcCCCCCCcchhh--------ccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcC
Q 002186 437 PDINYIDLSRNGFTGGIPTDINQ--------ASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSC 508 (955)
Q Consensus 437 ~~L~~L~Ls~N~l~~~ip~~~~~--------~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~ 508 (955)
++|+.|+|++|+++ .+|..+.. +++|++|++++| .+. .+|..+. ...+
T Consensus 697 ~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N-~L~-~lp~~l~---------------------~~~l 752 (876)
T 4ecn_A 697 SPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFN-KLT-SLSDDFR---------------------ATTL 752 (876)
T ss_dssp CCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSS-CCC-CCCGGGS---------------------TTTC
T ss_pred CCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCC-CCc-cchHHhh---------------------hccC
Confidence 88888888888888 55554322 125555555555 222 2333332 0145
Q ss_pred CccceEeccccccccccCCCCCcccccceeeecc------ccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCC
Q 002186 509 KSISVIESHMNNLSGTIPESVSNCVELERIDLAN------NKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSS 582 (955)
Q Consensus 509 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 582 (955)
++|+.|++++|++++ +|..+.++++|+.|+|++ |++.+.+|..+.++++|+.|+|++|++ +.+|..+. ++
T Consensus 753 ~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~ 828 (876)
T 4ecn_A 753 PYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQ 828 (876)
T ss_dssp TTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SS
T ss_pred CCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CC
Confidence 566666666666766 677777788888888765 889999999999999999999999999 78898876 69
Q ss_pred CcEEECCCCcceeccC
Q 002186 583 LTVLNVSFNDISGSIP 598 (955)
Q Consensus 583 L~~L~ls~N~l~g~ip 598 (955)
|+.||+++|++...-+
T Consensus 829 L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 829 LYILDIADNPNISIDV 844 (876)
T ss_dssp SCEEECCSCTTCEEEC
T ss_pred CCEEECCCCCCCccCh
Confidence 9999999999975443
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=452.61 Aligned_cols=457 Identities=18% Similarity=0.164 Sum_probs=322.3
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n 183 (955)
++||+++|+++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57999999998 5777766 89999999999999888889999999999999999999888889999999999999999
Q ss_pred CCcccCCCCcCCCCCCcEEEccCCCCCC-CCchhccCCCCCcEEecccccccCCCCccccCCCCC--cEEeccCCCC--C
Q 002186 184 YFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV--QYLDIAGANL--S 258 (955)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L--~~L~Ls~n~l--~ 258 (955)
.++ .+|.. .+++|++|+|++|.+++ .+|..++.+++|++|++++|.+.+ ..+..+++| ++|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 998 56665 89999999999999987 578888888888888888888775 345666666 8888888888 6
Q ss_pred CCCCccccCCC-CCCEEEeccccccccCCc-cCcCCCccCEEEccCCC-------CCCCCCcccCCCCCCcEEecccccC
Q 002186 259 GSIPKELSNLT-KLESLFLFRNQLAGQVPW-EFSRVTTLKSLDLSDNR-------LSGPIPESFADLKNLRLLSLMYNEM 329 (955)
Q Consensus 259 ~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~-------l~~~~p~~~~~l~~L~~L~Ls~N~l 329 (955)
+..|..+..++ +...+++++|++.+.++. .+..+++|+.|++++|. +.+.+| .++.+++|+.|+++.|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 77777766655 233456666766655543 45667777777777776 444444 566677777777776666
Q ss_pred CCCCccccC---CCCCccEEEccCCcCcccCCccc-----CCCCCCCeeecCCCcccccCCC-CCCCC---Cccceeecc
Q 002186 330 SGTVPESLV---QLPSLEILFIWNNYFSGSLPENL-----GRNSKLRWVDVSTNNFNGSIPP-DICSG---GVLFKLILF 397 (955)
Q Consensus 330 ~~~~p~~l~---~l~~L~~L~L~~N~l~~~~p~~~-----~~~~~L~~L~ls~N~l~g~ip~-~~~~~---~~l~~l~l~ 397 (955)
++..+..+. ..++|++|++++|.++|.+|..+ +.+++|+.+++++|.+ .+|. .++.. ..++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 543222111 13466666666666666666665 5666666666666665 3441 11111 335555555
Q ss_pred CCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCC--CCCcchhhccCCcccccCCCCCCC
Q 002186 398 SNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTG--GIPTDINQASKLEYFNVSNNPKLG 475 (955)
Q Consensus 398 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~ip~~~~~~~~L~~L~ls~N~~l~ 475 (955)
+|.+..... +..+++|++|++++|++++.+|..+..+++|++|++++|++++ .+|..+..
T Consensus 311 ~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~---------------- 372 (520)
T 2z7x_B 311 GTRMVHMLC--PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQ---------------- 372 (520)
T ss_dssp SSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTT----------------
T ss_pred CCccccccc--hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhh----------------
Confidence 555433210 1345555555555555555555555555555555555555553 23334444
Q ss_pred CCCCcccCCCCccccccCcccccCCCCCC--CCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhh
Q 002186 476 GMIPAQTWSLPSLQNFSASACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVL 553 (955)
Q Consensus 476 ~~~p~~~~~l~~L~~l~ls~n~l~~~~p~--~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 553 (955)
+++|+.|++++|.+++.+|. +..+++|+.|++++|.+++.+|..+. ++|+.|+|++|+++ .+|..+
T Consensus 373 ---------l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~ 440 (520)
T 2z7x_B 373 ---------MKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQV 440 (520)
T ss_dssp ---------CTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGG
T ss_pred ---------CCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhh
Confidence 44555555555555544442 35567788888888888888877665 78999999999999 788888
Q ss_pred cCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCccc
Q 002186 554 ARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKV 602 (955)
Q Consensus 554 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~ 602 (955)
..+++|++|+|++|+++...+..|..+++|++|++++|++++.++..+.
T Consensus 441 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 489 (520)
T 2z7x_B 441 VKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 489 (520)
T ss_dssp GGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHH
T ss_pred hcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCchHH
Confidence 8999999999999999964444599999999999999999998775443
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-46 Score=450.52 Aligned_cols=556 Identities=19% Similarity=0.159 Sum_probs=365.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCc
Q 002186 40 DDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV 119 (955)
Q Consensus 40 ~~~~~l~~w~~~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~ 119 (955)
|+...+++|... .+.+|....|......| +-++.+++ .+|+.+- ..+++|||++|+|++..|.
T Consensus 8 ~~~~~~~~~~~~---------~p~~~~~c~~~~~~~~~---~c~~~~l~-~vP~~lp----~~~~~LdLs~N~i~~l~~~ 70 (635)
T 4g8a_A 8 DDDDKLAAANSS---------IPESWEPCVEVVPNITY---QCMELNFY-KIPDNLP----FSTKNLDLSFNPLRHLGSY 70 (635)
T ss_dssp --------------------------CCSEEEETTTEE---ECTTSCCS-SCCSSSC----TTCCEEECTTSCCCEECTT
T ss_pred CCcchhhcccCC---------CCCCCCCccccCCCCEE---ECCCCCcC-ccCCCCC----cCCCEEEeeCCCCCCCCHH
Confidence 344556666532 23456554444323333 33334443 2443321 3689999999999998889
Q ss_pred cccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCC
Q 002186 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL 199 (955)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L 199 (955)
+|.++++|++|||++|+|++..|++|+++++|++|||++|++++..+..|.++++|++|+|++|.+++..+..|+++++|
T Consensus 71 ~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L 150 (635)
T 4g8a_A 71 SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTL 150 (635)
T ss_dssp TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTC
T ss_pred HHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCccc
Confidence 99999999999999999999989999999999999999999998777889999999999999999998878889999999
Q ss_pred cEEEccCCCCCC-CCchhccCCCCCcEEecccccccCCCCccccCCCCC----cEEeccCCCCCCCCCccccCCCCCCEE
Q 002186 200 EFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV----QYLDIAGANLSGSIPKELSNLTKLESL 274 (955)
Q Consensus 200 ~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L----~~L~Ls~n~l~~~~p~~l~~l~~L~~L 274 (955)
++|+|++|.+++ .+|..++.+++|++|++++|.+++..|..+..+.++ ..++++.|.+....+..+ ....++.+
T Consensus 151 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l 229 (635)
T 4g8a_A 151 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKL 229 (635)
T ss_dssp CEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEE
T ss_pred CeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhh
Confidence 999999999976 478899999999999999999998888877665543 478899999886555444 34456788
Q ss_pred EeccccccccC-CccCcCCCccCEEEccCC------CCCCCCCcccCCCCCCcEEecccccCCCC---CccccCCCCCcc
Q 002186 275 FLFRNQLAGQV-PWEFSRVTTLKSLDLSDN------RLSGPIPESFADLKNLRLLSLMYNEMSGT---VPESLVQLPSLE 344 (955)
Q Consensus 275 ~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N------~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~l~~l~~L~ 344 (955)
++.+|...... +..+..+..++...+..+ .+.......+..+..+...++..+..... .+..+..+.+++
T Consensus 230 ~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 309 (635)
T 4g8a_A 230 TLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVS 309 (635)
T ss_dssp EEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCS
T ss_pred hhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccc
Confidence 88887654322 233555666665554322 23333344455555566555554443322 223344456677
Q ss_pred EEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCc
Q 002186 345 ILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNS 424 (955)
Q Consensus 345 ~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 424 (955)
.+.+.+|.+.+.. .+.....++.|++++|.+.+..+. ....++.+.+..|...... ....+++|+.|++++|.
T Consensus 310 ~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~ 382 (635)
T 4g8a_A 310 SFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNG 382 (635)
T ss_dssp EEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSC
T ss_pred ccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCCc--ccccccccccchhhccc
Confidence 7777776665432 234455677777777776543222 2345666666666654432 23456777777777776
Q ss_pred ccc--ccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCC
Q 002186 425 FSG--EIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNL 502 (955)
Q Consensus 425 l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~ 502 (955)
+.. ..+..+..+.+|++++++.|...+ ++..+..+++|+.++++.|.......+..+..+.+++.++++.|.+.+..
T Consensus 383 l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~ 461 (635)
T 4g8a_A 383 LSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 461 (635)
T ss_dssp CBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECC
T ss_pred cccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccccccccccccccc
Confidence 642 344555666677777777776653 34445566677777777663333333344556667777777777766655
Q ss_pred CCC-CcCCccceEecccccc-ccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCC
Q 002186 503 PPF-KSCKSISVIESHMNNL-SGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSC 580 (955)
Q Consensus 503 p~~-~~~~~l~~l~l~~N~l-~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 580 (955)
|.. ..++.++.+++++|++ .+.+|..+..+++|++|||++|++++.+|..|+++++|++|+|++|+|++..|..|..+
T Consensus 462 ~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l 541 (635)
T 4g8a_A 462 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 541 (635)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTC
T ss_pred ccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCC
Confidence 543 5566777777777653 34456667777777777777777777777777777777777777777777777777777
Q ss_pred CCCcEEECCCCcceeccCCcc-cc-cccCCCccCCCCCCCCCC
Q 002186 581 SSLTVLNVSFNDISGSIPSGK-VL-RLMGSSAYAGNPKLCGAP 621 (955)
Q Consensus 581 ~~L~~L~ls~N~l~g~ip~~~-~~-~~~~~~~~~~n~~lcg~~ 621 (955)
++|++||+++|+|++..|..- .+ ..+....+.+||..|+|.
T Consensus 542 ~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 542 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 777777777777776655431 11 234445566777777643
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-48 Score=420.75 Aligned_cols=242 Identities=15% Similarity=0.240 Sum_probs=199.8
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.+++..|||||||++|+
T Consensus 78 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 157 (346)
T 4fih_A 78 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157 (346)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEE
T ss_pred EeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence 778899999999999995 589999999997543 235567899999999999999999999999999999999999999
Q ss_pred hhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccccc
Q 002186 773 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIA 849 (955)
Q Consensus 773 L~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~~ 849 (955)
|.+++.+ .+++.+...|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+....... ....+++
T Consensus 158 L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp 234 (346)
T 4fih_A 158 LTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 234 (346)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCG
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCc
Confidence 9999975 678899999999999999999999 999999999999999999999999999986543322 2234788
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
+|++||+.....++.++||||+||++|||+||+.||.+..... .+..+.+.. ....+.......++.+++.+|
T Consensus 235 ~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~------~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~ 307 (346)
T 4fih_A 235 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK------AMKMIRDNL-PPRLKNLHKVSPSLKGFLDRL 307 (346)
T ss_dssp GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSS-CCCCSCGGGSCHHHHHHHHHH
T ss_pred CcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHcCC-CCCCCccccCCHHHHHHHHHH
Confidence 8999999998899999999999999999999999997532211 111111111 111122233345678899999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 002186 930 TRSTPSDRPSMEEALKL 946 (955)
Q Consensus 930 l~~dp~~RPt~~ev~~~ 946 (955)
|+.||++|||++|++++
T Consensus 308 L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 308 LVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCSSTTTSCCHHHHTTC
T ss_pred cCCChhHCcCHHHHhcC
Confidence 99999999999999864
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=452.30 Aligned_cols=453 Identities=19% Similarity=0.192 Sum_probs=382.2
Q ss_pred EEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCC
Q 002186 79 GINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158 (955)
Q Consensus 79 ~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~ 158 (955)
.+|+++++++ .+|..+. ++|++|||++|.+++..|..|.++++|++|+|++|++++..|..|+.+++|++|||++
T Consensus 4 ~l~ls~n~l~-~ip~~~~----~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS----QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp EEECTTSCCS-SCCCSCC----TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred eEecCCCCcc-ccccccc----ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 4789999998 4776543 6899999999999988889999999999999999999999999999999999999999
Q ss_pred CCCCCCCchhhcCCCcceEEEecCCCCcc-cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCC--cEEecccccc--
Q 002186 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV--THMEIGYNFY-- 233 (955)
Q Consensus 159 N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~l~~n~l-- 233 (955)
|.++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++|.+++ ..+..+++| +.|++++|.+
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 9999 57766 89999999999999997 578999999999999999999986 467778888 9999999999
Q ss_pred cCCCCccccCCC-CCcEEeccCCCCCCCCCc-cccCCCCCCEEEecccc-------ccccCCccCcCCCccCEEEccCCC
Q 002186 234 QGNIPWQLGNMS-EVQYLDIAGANLSGSIPK-ELSNLTKLESLFLFRNQ-------LAGQVPWEFSRVTTLKSLDLSDNR 304 (955)
Q Consensus 234 ~g~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~-~l~~l~~L~~L~L~~N~-------l~~~~p~~~~~l~~L~~L~Ls~N~ 304 (955)
.+..|..+.++. +...+++++|.+.+.+++ .+.++++|+.|++++|. +.+.+| .+..+++|+.|++++|.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~ 231 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIE 231 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccc
Confidence 888898888876 455678899998877665 57889999999999998 777776 78999999999999998
Q ss_pred CCCCCCcccC---CCCCCcEEecccccCCCCCcccc-----CCCCCccEEEccCCcCcccCC-cccCCC---CCCCeeec
Q 002186 305 LSGPIPESFA---DLKNLRLLSLMYNEMSGTVPESL-----VQLPSLEILFIWNNYFSGSLP-ENLGRN---SKLRWVDV 372 (955)
Q Consensus 305 l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~~p-~~~~~~---~~L~~L~l 372 (955)
+++..+..+. ..++|+.|++++|+++|.+|..+ ..+++|+.+++++|.+ .+| ..+..+ .+|+.|++
T Consensus 232 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l 309 (520)
T 2z7x_B 232 TTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTV 309 (520)
T ss_dssp EEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEE
T ss_pred cCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEc
Confidence 8754322211 24689999999999999999998 8999999999999999 566 444433 67999999
Q ss_pred CCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCcccc--ccchhccCCCCCCEEECCCCcCC
Q 002186 373 STNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSG--EIPLKFSQLPDINYIDLSRNGFT 450 (955)
Q Consensus 373 s~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~ 450 (955)
++|.+.+.. ....+..|+.|++++|.+++.+|..+..+++|++|++++|++++ .+|..+..+++|++|++++|+++
T Consensus 310 ~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~ 387 (520)
T 2z7x_B 310 SGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVS 387 (520)
T ss_dssp ESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCB
T ss_pred CCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCC
Confidence 999986432 12467889999999999999999999999999999999999997 67788999999999999999999
Q ss_pred CCCCcc-hhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceEeccccccccccCCCC
Q 002186 451 GGIPTD-INQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESV 529 (955)
Q Consensus 451 ~~ip~~-~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g~~p~~~ 529 (955)
+.+|.. +..+++|++|++++| .+.+.+|..+. ++|+.|++++|+++ .+|..+
T Consensus 388 ~~l~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~l~-------------------------~~L~~L~Ls~N~l~-~ip~~~ 440 (520)
T 2z7x_B 388 YDEKKGDCSWTKSLLSLNMSSN-ILTDTIFRCLP-------------------------PRIKVLDLHSNKIK-SIPKQV 440 (520)
T ss_dssp CCGGGCSCCCCTTCCEEECCSS-CCCGGGGGSCC-------------------------TTCCEEECCSSCCC-CCCGGG
T ss_pred cccccchhccCccCCEEECcCC-CCCcchhhhhc-------------------------ccCCEEECCCCccc-ccchhh
Confidence 867764 667778888888887 44443332211 46777788888887 678878
Q ss_pred CcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccC
Q 002186 530 SNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIP 574 (955)
Q Consensus 530 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 574 (955)
..+++|++|+|++|+++...+..+..+++|++|+|++|.+++..+
T Consensus 441 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 441 VKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp GGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 899999999999999995433448899999999999999987544
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-47 Score=409.25 Aligned_cols=243 Identities=19% Similarity=0.205 Sum_probs=191.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc----CCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~e 766 (955)
..++||+|+||+||+|+. .+|+.||||++.... ...+.+.+|++++++++|||||+++++|.+ ++.+|||||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE 109 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence 446799999999999984 589999999997533 235678999999999999999999999875 346899999
Q ss_pred ecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-CCCceECcccccccccccCCC
Q 002186 767 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 767 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-~~~~ki~DfGl~~~~~~~~~~ 843 (955)
||++|+|.+++++ .+++.....|+.||++||+|||++ .++||||||||+|||++. ++.+||+|||+|+........
T Consensus 110 y~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~ 188 (290)
T 3fpq_A 110 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 188 (290)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccC
Confidence 9999999999975 568889999999999999999987 224999999999999984 789999999999865433333
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+++.|++||+..+ +++.++|||||||++|||+||+.||.+...... ....+.....+... ......++.
T Consensus 189 ~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~--~~~~i~~~~~~~~~-----~~~~~~~~~ 260 (290)
T 3fpq_A 189 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--IYRRVTSGVKPASF-----DKVAIPEVK 260 (290)
T ss_dssp ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--HHHHHTTTCCCGGG-----GGCCCHHHH
T ss_pred CcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH--HHHHHHcCCCCCCC-----CccCCHHHH
Confidence 3347788999998865 699999999999999999999999974332111 00111111111100 111224577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+++.+||+.||++|||++|++++
T Consensus 261 ~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 261 EIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHccCChhHCcCHHHHhcC
Confidence 89999999999999999999863
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=415.30 Aligned_cols=241 Identities=16% Similarity=0.124 Sum_probs=194.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
..+.||+|+||+||+|+. .+|+.||||+++.... ..+|++++++++|||||++++++.+++..|||||||++|+|
T Consensus 62 ~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred eCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 667899999999999994 6899999999975432 24689999999999999999999999999999999999999
Q ss_pred hHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-CceECcccccccccccCC-------C
Q 002186 774 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADG-------S 843 (955)
Q Consensus 774 ~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~-~~ki~DfGl~~~~~~~~~-------~ 843 (955)
.++|++ .+++.+...|+.|++.||+|||+. +||||||||+|||++.++ .+||+|||+|+....... .
T Consensus 138 ~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~ 214 (336)
T 4g3f_A 138 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214 (336)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------C
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCC
Confidence 999975 578999999999999999999999 999999999999999987 699999999986543221 1
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...++++|++||+..+..++.++||||+||++|||+||+.||.+..... .......+..... ..++.....+.
T Consensus 215 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~i~~~~~~~~-----~~~~~~s~~~~ 287 (336)
T 4g3f_A 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--LCLKIASEPPPIR-----EIPPSCAPLTA 287 (336)
T ss_dssp CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC--CHHHHHHSCCGGG-----GSCTTSCHHHH
T ss_pred ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHHcCCCCch-----hcCccCCHHHH
Confidence 1236778999999999999999999999999999999999997533211 1111111111000 11122335577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
+++.+||+.||++|||++|++++|..
T Consensus 288 ~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 288 QAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 88999999999999999999987754
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-47 Score=415.70 Aligned_cols=242 Identities=16% Similarity=0.192 Sum_probs=191.9
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
+|. ..+.||+|+||+||+|+ ..+|+.||||+++... ...+.+.+|+++|++++|||||++++++++++..||||
T Consensus 25 ~Y~--~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 25 KYV--RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CEE--EEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceE--EeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 455 88899999999999998 4689999999997543 23567889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 766 DYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 766 ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
|||++|+|.++|.. ..++.+...|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 99999999999964 236778889999999999999999 99999999999999999999999999998654322
Q ss_pred C--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....++++|++||+..+..++.++||||+|||+|||+||+.||.+.... ..+..+.......... ...
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~~~i~~~~~~~~~~---~~s 250 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK------NLVLKIISGSFPPVSL---HYS 250 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTCCCCCCT---TSC
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHHcCCCCCCCc---cCC
Confidence 1 1123677899999999999999999999999999999999999753211 1111222111111111 223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.++.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 251 YDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 45778999999999999999999986
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-46 Score=441.87 Aligned_cols=486 Identities=20% Similarity=0.203 Sum_probs=346.9
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
..+.|.++|.++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 7 ~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 7 SGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp TSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 344688888887 5666554 7888999999988888888888888888888888888887778888888888888888
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCC-CCchhccCCCCCcEEecccccccCCCC-ccccCCCCCcEEeccCCCCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIP-WQLGNMSEVQYLDIAGANLSGS 260 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~g~~p-~~~~~l~~L~~L~Ls~n~l~~~ 260 (955)
|.+++..|..|+++++|++|+|++|.+++ ..|..++.+++|++|++++|.+.+.+| ..+.++++|++|++++|.+++.
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 163 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc
Confidence 88887777778888888888888888876 356677777777777777776444444 4566677777777777777766
Q ss_pred CCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCC--C-cccCCCCCCcEEecccccCCCCCc---
Q 002186 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPI--P-ESFADLKNLRLLSLMYNEMSGTVP--- 334 (955)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p-~~~~~l~~L~~L~Ls~N~l~~~~p--- 334 (955)
+|..+..+++|++|+++.|.+....+..+..+++|++|++++|++++.. | .....+++|+.|++++|.+++..+
T Consensus 164 ~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l 243 (549)
T 2z81_A 164 QSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNEL 243 (549)
T ss_dssp CTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHH
T ss_pred ChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHH
Confidence 6666766777777777766654332222345666666666666666531 1 122345566666666665554322
Q ss_pred -cccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCC-----CCCcC
Q 002186 335 -ESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG-----SLSPS 408 (955)
Q Consensus 335 -~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~-----~~p~~ 408 (955)
..+..+++|+.+++++|.+.+...-.. .....+.....++.+.+.++.+.. .++..
T Consensus 244 ~~~~~~~~~L~~l~l~~~~~~~~~~~~~------------------~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~ 305 (549)
T 2z81_A 244 LKLLRYILELSEVEFDDCTLNGLGDFNP------------------SESDVVSELGKVETVTIRRLHIPQFYLFYDLSTV 305 (549)
T ss_dssp HGGGGGCTTCCEEEEESCEEECCSCCCC------------------CTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHH
T ss_pred HHHhhhhccccccccccccccccccccc------------------cchhhhhhhcccccccccccccchhhhcccchhh
Confidence 223445556666666655544210000 000112223344444444444332 12222
Q ss_pred ccCCCCCcEEECcCCccccccchhc-cCCCCCCEEECCCCcCCCCCCc---chhhccCCcccccCCCCCCCCCCC--ccc
Q 002186 409 LSNCSSLVRLRLEDNSFSGEIPLKF-SQLPDINYIDLSRNGFTGGIPT---DINQASKLEYFNVSNNPKLGGMIP--AQT 482 (955)
Q Consensus 409 ~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~ip~---~~~~~~~L~~L~ls~N~~l~~~~p--~~~ 482 (955)
+...++|+.|++++|++. .+|..+ ..+++|++|++++|++++.+|. .+..+++|++|++++| .+.+..+ ..+
T Consensus 306 ~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~ 383 (549)
T 2z81_A 306 YSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQN-HLRSMQKTGEIL 383 (549)
T ss_dssp HHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTS-CCCCHHHHHHHG
T ss_pred hhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCC-cccccccchhhh
Confidence 344678999999999997 666665 6799999999999999987753 3678899999999999 5554322 457
Q ss_pred CCCCccccccCcccccCCCCCC-CCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcE
Q 002186 483 WSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGV 561 (955)
Q Consensus 483 ~~l~~L~~l~ls~n~l~~~~p~-~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 561 (955)
..+++|+.|++++|+++. +|. +..+++|+.|++++|.+++ +|..+ .++|++|||++|++++.+ ..+++|++
T Consensus 384 ~~l~~L~~L~Ls~N~l~~-lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~ 455 (549)
T 2z81_A 384 LTLKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQE 455 (549)
T ss_dssp GGCTTCCEEECTTCCCCC-CCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCE
T ss_pred hcCCCCCEEECCCCCCcc-CChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcE
Confidence 789999999999999995 554 5788999999999999974 45443 268999999999999764 57899999
Q ss_pred EECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCc-ccccccCCCccCCCCCCCCCC
Q 002186 562 LDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG-KVLRLMGSSAYAGNPKLCGAP 621 (955)
Q Consensus 562 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~lcg~~ 621 (955)
|+|++|+++ .+|. ...+++|++|++++|++++.+|.. ..+..+....+.+|+..|.++
T Consensus 456 L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 456 LYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp EECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred EECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 999999999 5676 467999999999999999877753 455666777889999988754
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-47 Score=418.43 Aligned_cols=245 Identities=22% Similarity=0.212 Sum_probs=194.7
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCC-CCceeEeEEEEcC-CeeEEE
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRH-KNLIRLLGFCYNR-HQAYLL 764 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~-~~~~lv 764 (955)
..+.||+|+||+||+|+. .+++.||||+++.... ..+.+.+|+++|++++| ||||+++|+|.++ +..|||
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 667899999999999973 2457899999976433 35678899999999976 8999999999764 568999
Q ss_pred EeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCc
Q 002186 765 YDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ 826 (955)
||||++|+|.++|+. .++|.++..|+.|||+||+|||+. +||||||||+|||+++++.+
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~v 224 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVV 224 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeCCCCCE
Confidence 999999999999964 257899999999999999999999 99999999999999999999
Q ss_pred eECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccc
Q 002186 827 HLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLG 901 (955)
Q Consensus 827 ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~ 901 (955)
||+|||+|+........ ...++..|++||+.....++.++|||||||++|||+| |+.||.+..... . ....+.
T Consensus 225 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~-~-~~~~i~ 302 (353)
T 4ase_A 225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-E-FCRRLK 302 (353)
T ss_dssp EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-H-HHHHHH
T ss_pred EECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-H-HHHHHH
Confidence 99999999865433221 1224556889999999999999999999999999998 888886432211 1 111111
Q ss_pred ccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 902 EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+-.. ...++ ....++.+++.+||+.||++||||+||+++|+.+
T Consensus 303 ~g~~---~~~p~---~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 303 EGTR---MRAPD---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp HTCC---CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCC---CCCCc---cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 1111 11111 2234577899999999999999999999999765
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=421.56 Aligned_cols=245 Identities=15% Similarity=0.254 Sum_probs=200.6
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||+++++|.+++..||||||
T Consensus 152 ~y~--~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 152 YLD--NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp TEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hcE--eeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 355 778899999999999994 689999999997643 3355688999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CC
Q 002186 768 LPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~ 844 (955)
|++|+|.++++. .+++.+...|+.||++||+|||+. +||||||||+|||++.++.+||+|||+|+....... ..
T Consensus 230 ~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred CCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence 999999999975 678888999999999999999999 999999999999999999999999999986543322 22
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..++++|++||++....|+.++||||+||++|||+||+.||.+..... .. ..+.....+. .........++.+
T Consensus 307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~-~~i~~~~~~~----~~~~~~~s~~~~d 379 (423)
T 4fie_A 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AM-KMIRDNLPPR----LKNLHKVSPSLKG 379 (423)
T ss_dssp CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HH-HHHHHSCCCC----CSCTTSSCHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HH-HHHHcCCCCC----CcccccCCHHHHH
Confidence 347888999999999999999999999999999999999997533211 00 1111111111 1111223356778
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 002186 925 VALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
++.+||+.||++|||++|++++
T Consensus 380 li~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 380 FLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHcCCChhHCcCHHHHhcC
Confidence 9999999999999999999874
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-46 Score=392.43 Aligned_cols=242 Identities=17% Similarity=0.163 Sum_probs=185.7
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.+|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..|+
T Consensus 13 g~Y~--i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 13 GNYQ--IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp -CCE--EEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred eCeE--EEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4565 788999999999999985 589999999997532 224568899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||| +|+|.+++.+ .++..+...++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 91 vmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 99999 6899999865 568888899999999999999999 99999999999999999999999999998654332
Q ss_pred C-CCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 G-SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~-~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....+++.|++||+..+..+ +.++||||+||++|||+||+.||.+... ......+.... ...+. ...
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~------~~~~~~i~~~~-~~~p~---~~s 236 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI------PVLFKNISNGV-YTLPK---FLS 236 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTC-CCCCT---TSC
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHcCC-CCCCC---CCC
Confidence 2 22347788999999987765 5789999999999999999999974321 11111111111 11111 123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.++.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 237 PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 456788999999999999999999873
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-46 Score=401.40 Aligned_cols=239 Identities=18% Similarity=0.173 Sum_probs=197.3
Q ss_pred cccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
|. ..+.||+|+||+||+|+ ..+|+.||||++++.. ...+.+.+|+++|++++|||||++++++++++..||||
T Consensus 34 y~--i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 34 FK--FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp EE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cE--EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 55 78899999999999998 4689999999997532 23567889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
|||++|+|.+++++ .++..+...|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+.......
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 99999999999976 567888889999999999999999 999999999999999999999999999987543221
Q ss_pred ---CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 843 ---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 843 ---~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
....++++|++||+..+..++.++||||+||++|||+||+.||.+.... .....+.... ...++ ...
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~~~~i~~~~-~~~p~---~~s 258 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG------LIFAKIIKLE-YDFPE---KFF 258 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC-CCCCT---TCC
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCC-CCCCc---ccC
Confidence 1234778899999999999999999999999999999999999743211 1111121111 11111 123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEAL 944 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~ 944 (955)
.++.+++.+||+.||++|||++|+.
T Consensus 259 ~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 259 PKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred HHHHHHHHHHccCCHhHCcChHHHc
Confidence 4577899999999999999999863
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-44 Score=431.37 Aligned_cols=518 Identities=19% Similarity=0.166 Sum_probs=411.6
Q ss_pred cEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEe
Q 002186 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (955)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ld 155 (955)
.++.+||+.+.+++..+..+.. +++|++|||++|+|+++.|.+|.+|++|++|+|++|+|++..+..|.++++|++|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~--l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFS--FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTT--CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred CCCEEEeeCCCCCCCCHHHHhC--CCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 5789999999998766666766 89999999999999998899999999999999999999988888999999999999
Q ss_pred CCCCCCCCCCchhhcCCCcceEEEecCCCCcc-cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCc----EEeccc
Q 002186 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVT----HMEIGY 230 (955)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~l~~ 230 (955)
|++|++++..+..|+++++|++|+|++|.+++ .+|..++.+++|++|+|++|++++..|..+..+++++ .++++.
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~ 210 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 210 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhccc
Confidence 99999998777889999999999999999976 4688899999999999999999998898887766544 688888
Q ss_pred ccccCCCCccccCCCCCcEEeccCCCCCCCC-CccccCCCCCCEEEeccccc------cccCCccCcCCCccCEEEccCC
Q 002186 231 NFYQGNIPWQLGNMSEVQYLDIAGANLSGSI-PKELSNLTKLESLFLFRNQL------AGQVPWEFSRVTTLKSLDLSDN 303 (955)
Q Consensus 231 n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~L~~N~l------~~~~p~~~~~l~~L~~L~Ls~N 303 (955)
|.+....+. ......++.+++.+|..+..+ +..+..+..++...+..+.. .......+..+..+...++..+
T Consensus 211 n~l~~i~~~-~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ 289 (635)
T 4g8a_A 211 NPMNFIQPG-AFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 289 (635)
T ss_dssp CCCCEECTT-TTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEE
T ss_pred CcccccCcc-cccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 888754443 344456788888888665332 34466777777776654332 2222334555556666655544
Q ss_pred CCCC---CCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCccccc
Q 002186 304 RLSG---PIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGS 380 (955)
Q Consensus 304 ~l~~---~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ 380 (955)
.... ..+..+..+.+++.+++..+.+.... .+....+|+.|++.+|.+.+..+. .+..|+.++++.|.....
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~ 364 (635)
T 4g8a_A 290 YLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA 364 (635)
T ss_dssp CCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB
T ss_pred hhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC
Confidence 3322 23445666778888888888776432 345567788888888887754443 356678888888876543
Q ss_pred CCCCCCCCCccceeeccCCCCCC--CCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCC-cch
Q 002186 381 IPPDICSGGVLFKLILFSNNFTG--SLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIP-TDI 457 (955)
Q Consensus 381 ip~~~~~~~~l~~l~l~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip-~~~ 457 (955)
. ....++.++.++++.|.+.. ..+..+..+.+|+.|+++.|.+.. ++..+..+++|+.++++.|+.....+ ..+
T Consensus 365 ~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~ 441 (635)
T 4g8a_A 365 F--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVF 441 (635)
T ss_dssp C--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTT
T ss_pred c--ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccc
Confidence 2 33456778888888887753 445566678889999999888874 45567888999999998888776655 346
Q ss_pred hhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCC-CCC-CCcCCccceEeccccccccccCCCCCccccc
Q 002186 458 NQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN-LPP-FKSCKSISVIESHMNNLSGTIPESVSNCVEL 535 (955)
Q Consensus 458 ~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~-~p~-~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L 535 (955)
..+.+++.++++.| .+.+..|..+..+++|+.+++++|.+... .|. +..+++|+.|++++|++++.+|..|.++++|
T Consensus 442 ~~l~~l~~l~ls~n-~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L 520 (635)
T 4g8a_A 442 LSLRNLIYLDISHT-HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 520 (635)
T ss_dssp TTCTTCCEEECTTS-CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cccccccccccccc-ccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCC
Confidence 77888999999998 77777788888888999999998875543 443 5788999999999999999999999999999
Q ss_pred ceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCC-CCCcEEECCCCcceeccCCcccccc
Q 002186 536 ERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSC-SSLTVLNVSFNDISGSIPSGKVLRL 605 (955)
Q Consensus 536 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ls~N~l~g~ip~~~~~~~ 605 (955)
++|+|++|++++..|..|..+++|++|||++|+|++.+|..|..+ ++|++|++++|++++.+...+..++
T Consensus 521 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~w 591 (635)
T 4g8a_A 521 QVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQW 591 (635)
T ss_dssp CEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHH
T ss_pred CEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHH
Confidence 999999999999999999999999999999999999999999998 7899999999999998765444443
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-46 Score=398.40 Aligned_cols=241 Identities=16% Similarity=0.120 Sum_probs=188.9
Q ss_pred hcccchhhhccCCCCCceEEEeC----CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 762 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... .....+.+|+++|++++|||||++++++++++..|
T Consensus 25 ~Y~--i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 25 QFE--LLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GEE--EEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred ccE--EEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 365 888999999999999974 368899999997532 22346778999999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
+|||||++|+|.+++.+ .+++.+...++.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+.....
T Consensus 103 ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 99999999999999976 568888899999999999999999 9999999999999999999999999999864332
Q ss_pred CC--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 841 DG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 841 ~~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
.. ....++++|++||...+..++.++||||+||++|||+||+.||.+.... .....+.... ...+. ..
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~~~i~~~~-~~~p~---~~ 249 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK------ETMTMILKAK-LGMPQ---FL 249 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TS
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH------HHHHHHHcCC-CCCCC---cC
Confidence 22 2234778899999999999999999999999999999999999743211 1111111111 11111 12
Q ss_pred HHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPS-----MEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt-----~~ev~~ 945 (955)
..++.+++.+||+.||++||| ++|+++
T Consensus 250 s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 250 SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 345778999999999999998 567765
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-44 Score=425.49 Aligned_cols=462 Identities=18% Similarity=0.174 Sum_probs=319.7
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
...+++|+++|++++ +|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 31 ~~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 107 (562)
T 3a79_B 31 ELESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDV 107 (562)
T ss_dssp --CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEEC
Confidence 345899999999995 776665 89999999999999888889999999999999999999888999999999999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCC-CCchhccCCCCCcEEecccccccCCCCccccCCCCC--cEEeccCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV--QYLDIAGANL 257 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L--~~L~Ls~n~l 257 (955)
++|.++ .+|.. .+++|++|+|++|++++ .+|..++++++|++|++++|.+.+. .+..+++| ++|++++|.+
T Consensus 108 s~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 108 SHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp TTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSC
T ss_pred CCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccc
Confidence 999998 56766 89999999999999987 4568888899999999988888763 33444444 8888888888
Q ss_pred --CCCCCccccCCC--CCCEEEeccccccccCCc-cCcCCCccCEEEccCCCC-----CCCCCcccCCCCCCcEEecccc
Q 002186 258 --SGSIPKELSNLT--KLESLFLFRNQLAGQVPW-EFSRVTTLKSLDLSDNRL-----SGPIPESFADLKNLRLLSLMYN 327 (955)
Q Consensus 258 --~~~~p~~l~~l~--~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l-----~~~~p~~~~~l~~L~~L~Ls~N 327 (955)
++..|..+..+. .+ .++++.|.+.+.++. .+..+++|+.+++++|+. .+ ....+..+++|+.|++.++
T Consensus 182 ~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~ 259 (562)
T 3a79_B 182 HIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHI 259 (562)
T ss_dssp CCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEE
T ss_pred cccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCC
Confidence 777777776654 22 456677777665543 355677777788777752 11 1234566677777777666
Q ss_pred cCCCCC----ccccCCCCCccEEEccCCcCcccCCccc-----CCCCCCCeeecCCCcccccCCCC-CC---CCCcccee
Q 002186 328 EMSGTV----PESLVQLPSLEILFIWNNYFSGSLPENL-----GRNSKLRWVDVSTNNFNGSIPPD-IC---SGGVLFKL 394 (955)
Q Consensus 328 ~l~~~~----p~~l~~l~~L~~L~L~~N~l~~~~p~~~-----~~~~~L~~L~ls~N~l~g~ip~~-~~---~~~~l~~l 394 (955)
.+.+.. +..+ ..++|++|++++|.++|.+|..+ ..+..|+.++++.|.+ .+|.. ++ ....++.|
T Consensus 260 ~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L 336 (562)
T 3a79_B 260 ETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKML 336 (562)
T ss_dssp EECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEE
T ss_pred cCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEE
Confidence 655321 1111 22367777777777776666655 4444444445544444 23311 00 11234455
Q ss_pred eccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCC
Q 002186 395 ILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKL 474 (955)
Q Consensus 395 ~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l 474 (955)
++++|.+..... ...+++|++|++++|++++.+|..+.++++|++|++++|++++..
T Consensus 337 ~l~~n~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--------------------- 393 (562)
T 3a79_B 337 SISDTPFIHMVC--PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF--------------------- 393 (562)
T ss_dssp EEESSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTT---------------------
T ss_pred EccCCCcccccC--ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcc---------------------
Confidence 555554432211 134445555555555555444445555555555555555544311
Q ss_pred CCCCCcccCCCCccccccCcccccCCCCCC--CCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhh
Q 002186 475 GGMIPAQTWSLPSLQNFSASACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEV 552 (955)
Q Consensus 475 ~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~--~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 552 (955)
.+|..+..+++|+.|++++|.+++.+|. +..+++|+.|++++|++++.+|..+. ++|+.|+|++|+++ .+|..
T Consensus 394 --~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~ 468 (562)
T 3a79_B 394 --KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKD 468 (562)
T ss_dssp --HHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTT
T ss_pred --cchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChh
Confidence 1223344555555555555556554443 45677888888888888888887665 78999999999998 67777
Q ss_pred hcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCccccc
Q 002186 553 LARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLR 604 (955)
Q Consensus 553 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~~ 604 (955)
+..+++|++|+|++|++++..+..|..+++|++|++++|+++|.+|....++
T Consensus 469 ~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~ 520 (562)
T 3a79_B 469 VTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLS 520 (562)
T ss_dssp TTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHHHHHH
T ss_pred hcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchHHHHH
Confidence 7799999999999999996444459999999999999999999888655433
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=389.84 Aligned_cols=240 Identities=17% Similarity=0.211 Sum_probs=183.6
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCC-------
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH------- 759 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------- 759 (955)
.|. ..+.||+|+||+||+|+ ..+|+.||||+++.... ..+.+.+|+++|++++|||||++++++.+.+
T Consensus 6 dy~--~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 6 DFE--PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HEE--EEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hCE--EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 355 78899999999999998 46899999999975332 3567889999999999999999999987543
Q ss_pred -----eeEEEEeecCCCChhHHhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 760 -----QAYLLYDYLPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 760 -----~~~lv~ey~~~gsL~~~l~~~-----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
..|+|||||++|+|.+++... .++.....|+.|+++||+|||+. +||||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 369999999999999999763 35666788999999999999999 99999999999999999999999
Q ss_pred cccccccccccCCC--------------CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc
Q 002186 830 EFGFKYLTQLADGS--------------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP 895 (955)
Q Consensus 830 DfGl~~~~~~~~~~--------------~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~ 895 (955)
|||+|+........ ...+++.|++||...+..++.++||||+||++|||++ ||.....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~----- 232 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME----- 232 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH-----
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH-----
Confidence 99999865432211 1236778999999999999999999999999999997 6642110
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....+...... ..++...+......+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~---~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 233 RVRTLTDVRNL---KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHHHTT---CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhcC---CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00111111111 112223344455678999999999999999999987
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=423.23 Aligned_cols=453 Identities=21% Similarity=0.217 Sum_probs=366.8
Q ss_pred EEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCC
Q 002186 78 VGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAF 157 (955)
Q Consensus 78 ~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~ 157 (955)
..++++++++++ +|..+ .++|++|||++|.+++..|.+|.++++|++|+|++|++++..|+.|+.+++|++|||+
T Consensus 34 ~~l~ls~~~L~~-ip~~~----~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDL----PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp CEEECTTSCCCS-CCTTS----CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred cEEEcCCCCCcc-CCCCC----CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 567889998886 66644 3689999999999999888999999999999999999999999999999999999999
Q ss_pred CCCCCCCCchhhcCCCcceEEEecCCCCcc-cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCC--cEEecccccc-
Q 002186 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV--THMEIGYNFY- 233 (955)
Q Consensus 158 ~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~l~~n~l- 233 (955)
+|.++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|+|++|.+++. .+..+++| +.|++++|.+
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCC
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccc
Confidence 99999 56766 89999999999999997 4578999999999999999999874 44555555 9999999999
Q ss_pred -cCCCCccccCCC-CCcEEeccCCCCCCCCCc-cccCCCCCCEEEecccc-----ccccCCccCcCCCccCEEEccCCCC
Q 002186 234 -QGNIPWQLGNMS-EVQYLDIAGANLSGSIPK-ELSNLTKLESLFLFRNQ-----LAGQVPWEFSRVTTLKSLDLSDNRL 305 (955)
Q Consensus 234 -~g~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~-~l~~l~~L~~L~L~~N~-----l~~~~p~~~~~l~~L~~L~Ls~N~l 305 (955)
.+..|..+.++. ..-.+++++|.+.+.+++ .+..+++|+.|++++|+ +.+.+ ..+..+++|+.|+++++.+
T Consensus 183 ~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~-~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 183 IKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFL-SELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHH-HHHHSCSSCEEEEEEEEEE
T ss_pred ccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHH-HHHhccCcceEEEecCCcC
Confidence 888898888775 223568899999887765 46778999999999985 33322 3467788899998888776
Q ss_pred CCC----CCcccCCCCCCcEEecccccCCCCCcccc-----CCCCCccEEEccCCcCcccCCc-ccC---CCCCCCeeec
Q 002186 306 SGP----IPESFADLKNLRLLSLMYNEMSGTVPESL-----VQLPSLEILFIWNNYFSGSLPE-NLG---RNSKLRWVDV 372 (955)
Q Consensus 306 ~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~~p~-~~~---~~~~L~~L~l 372 (955)
++. ++..+ ..++|++|++++|+++|.+|..+ ..++.|+.+++..|.+ .+|. .+. ...+|+.|++
T Consensus 262 ~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l 338 (562)
T 3a79_B 262 TWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSI 338 (562)
T ss_dssp CHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEE
T ss_pred cHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEc
Confidence 642 12222 23599999999999999999887 7788888888888877 4552 222 2257999999
Q ss_pred CCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCcccc--ccchhccCCCCCCEEECCCCcCC
Q 002186 373 STNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSG--EIPLKFSQLPDINYIDLSRNGFT 450 (955)
Q Consensus 373 s~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~ 450 (955)
++|.+..... ......|+.|++++|.+++.+|..+.++++|++|++++|++++ .+|..|..+++|++|++++|+++
T Consensus 339 ~~n~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~ 416 (562)
T 3a79_B 339 SDTPFIHMVC--PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLN 416 (562)
T ss_dssp ESSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCB
T ss_pred cCCCcccccC--ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCC
Confidence 9999863221 1467889999999999999999999999999999999999997 45678999999999999999999
Q ss_pred CCCCcc-hhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceEeccccccccccCCCC
Q 002186 451 GGIPTD-INQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESV 529 (955)
Q Consensus 451 ~~ip~~-~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g~~p~~~ 529 (955)
+.+|.. +..+++|++|++++| .+.+.+|..+. ++|+.|++++|+++ .+|..+
T Consensus 417 ~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~l~-------------------------~~L~~L~L~~N~l~-~ip~~~ 469 (562)
T 3a79_B 417 SHAYDRTCAWAESILVLNLSSN-MLTGSVFRCLP-------------------------PKVKVLDLHNNRIM-SIPKDV 469 (562)
T ss_dssp SCCSSCCCCCCTTCCEEECCSS-CCCGGGGSSCC-------------------------TTCSEEECCSSCCC-CCCTTT
T ss_pred CccChhhhcCcccCCEEECCCC-CCCcchhhhhc-------------------------CcCCEEECCCCcCc-ccChhh
Confidence 866654 667778888888887 44433332211 46777777778777 677777
Q ss_pred CcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccC
Q 002186 530 SNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIP 574 (955)
Q Consensus 530 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 574 (955)
.++++|+.|+|++|++++..+..+..+++|+.|+|++|.+.+..|
T Consensus 470 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 470 THLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp TSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred cCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 799999999999999995433448899999999999999987554
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=381.21 Aligned_cols=293 Identities=28% Similarity=0.481 Sum_probs=177.3
Q ss_pred CCChhhHHHHHHhhhhCCCCCCCCCCCCCCCCCCCCCCCCCcc--ccceeecCCC--CcEEEEEcCCCCCCc--cCCCCc
Q 002186 22 SANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACS--WSGVKCNKNN--TIVVGINLSMKGLSG--ALPGKP 95 (955)
Q Consensus 22 ~~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~c~--w~gv~C~~~~--~~v~~l~l~~~~l~g--~~~~~~ 95 (955)
.|.++|++||++||+++.+|. .+++|..+ .+||. |.||+|+..+ ++|+.++++++++.| .+|+.+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~--------~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l 72 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPT--------TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSL 72 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTT--------SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGG
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCC--------CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhH
Confidence 577899999999999998876 78999653 56888 9999998744 567766666666666 555555
Q ss_pred chhcCCCCcEEECCC-CcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCc
Q 002186 96 LRIFFNELVDLNLSH-NSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEH 174 (955)
Q Consensus 96 ~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~ 174 (955)
.. +++|++|+|++ |.+.+.+|..|.++++|++|+|++|.+++.+|..|..+++|++|||++|.+++.+|..+.++++
T Consensus 73 ~~--l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 150 (313)
T 1ogq_A 73 AN--LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150 (313)
T ss_dssp GG--CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred hC--CCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCC
Confidence 55 55666666663 5666666666666666666666666666556666666666666666666666556666666666
Q ss_pred ceEEEecCCCCcccCCCCcCCCC-CCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEecc
Q 002186 175 LKVLNLAGSYFSGPIPSQFGSFK-SLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIA 253 (955)
Q Consensus 175 L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls 253 (955)
|++|+|++|.+++.+|..|++++ +|++|+|++|.+++.+|..+..++ |+.|++++|.+.+.+|..+.+
T Consensus 151 L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~---------- 219 (313)
T 1ogq_A 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGS---------- 219 (313)
T ss_dssp CCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCT----------
T ss_pred CCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhc----------
Confidence 66666666666555565555555 556666666555555555555554 555555555554444444444
Q ss_pred CCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCC
Q 002186 254 GANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV 333 (955)
Q Consensus 254 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 333 (955)
+++|++|++++|++++.+|. +..+++|++|+|++|++++.+|.+|..+++|+.|++++|+++|.+
T Consensus 220 --------------l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~i 284 (313)
T 1ogq_A 220 --------------DKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284 (313)
T ss_dssp --------------TSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEEC
T ss_pred --------------CCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccC
Confidence 44455555555544444333 444455555555555555555555555555555555555555555
Q ss_pred ccccCCCCCccEEEccCCc
Q 002186 334 PESLVQLPSLEILFIWNNY 352 (955)
Q Consensus 334 p~~l~~l~~L~~L~L~~N~ 352 (955)
|.. ..+++|+.|++++|.
T Consensus 285 p~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 285 PQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CCS-TTGGGSCGGGTCSSS
T ss_pred CCC-ccccccChHHhcCCC
Confidence 543 445555555555554
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-41 Score=387.60 Aligned_cols=407 Identities=25% Similarity=0.334 Sum_probs=169.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCC-------------cEEeCCCCCCCCCCc
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNL-------------LVLDAFSNSFSGSVP 166 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------------~~LdL~~N~l~~~~p 166 (955)
..+|++|++++|.+ |.+|.+++++++|++|++++|.+.|.+|..++.+++| ++|++++|.+++ +|
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 46789999999999 7899999999999999999999999999999988876 666666666664 33
Q ss_pred hhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCC
Q 002186 167 AEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSE 246 (955)
Q Consensus 167 ~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~ 246 (955)
.. .++|++|++++|.+++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|.+++ +| .++++++
T Consensus 88 ~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~ 154 (454)
T 1jl5_A 88 EL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSF 154 (454)
T ss_dssp SC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred CC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence 21 2456666666666665 4532 2566666666666654 2211 1455555555555554 44 3555555
Q ss_pred CcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEeccc
Q 002186 247 VQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMY 326 (955)
Q Consensus 247 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 326 (955)
|++|++++|.+++ +|..+ .+|++|++++|++++ +| .+..+++|++|++++|++++ +|... ++|+.|++++
T Consensus 155 L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~ 224 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGN 224 (454)
T ss_dssp CCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCS
T ss_pred CCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcC
Confidence 5555555555543 33322 245555555555544 23 34455555555555555543 22211 2444455555
Q ss_pred ccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCC
Q 002186 327 NEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLS 406 (955)
Q Consensus 327 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p 406 (955)
|+++ .+|. +..+++|++|++++|++++ +|.. .++|+.|++++|.+++ +|.
T Consensus 225 n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~----------------------- 274 (454)
T 1jl5_A 225 NILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPE----------------------- 274 (454)
T ss_dssp SCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCC-----------------------
T ss_pred CcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCc-----------------------
Confidence 5444 3332 4444444444444444443 2221 1344444444444442 222
Q ss_pred cCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCC
Q 002186 407 PSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLP 486 (955)
Q Consensus 407 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~ 486 (955)
. +++|+.|++++|++++. |. -.++|++|++++|++++ ++. ..++|++|++++| .+.+ +|.. ++
T Consensus 275 -~---~~~L~~L~ls~N~l~~l-~~---~~~~L~~L~l~~N~l~~-i~~---~~~~L~~L~Ls~N-~l~~-lp~~---~~ 337 (454)
T 1jl5_A 275 -L---PQSLTFLDVSENIFSGL-SE---LPPNLYYLNASSNEIRS-LCD---LPPSLEELNVSNN-KLIE-LPAL---PP 337 (454)
T ss_dssp -C---CTTCCEEECCSSCCSEE-SC---CCTTCCEEECCSSCCSE-ECC---CCTTCCEEECCSS-CCSC-CCCC---CT
T ss_pred -c---cCcCCEEECcCCccCcc-cC---cCCcCCEEECcCCcCCc-ccC---CcCcCCEEECCCC-cccc-cccc---CC
Confidence 1 24555555555555541 11 01455555555555553 111 0124555555555 3332 2322 23
Q ss_pred ccccccCcccccCCCCCCCCcCCccceEecccccccc--ccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEEC
Q 002186 487 SLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSG--TIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDL 564 (955)
Q Consensus 487 ~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 564 (955)
+|+.|++++|.+++ +|. .+++|+.|++++|++++ .+|.++.+ |+.|++.|.+|.. +++|++||+
T Consensus 338 ~L~~L~L~~N~l~~-lp~--~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~l 403 (454)
T 1jl5_A 338 RLERLIASFNHLAE-VPE--LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHV 403 (454)
T ss_dssp TCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC--------------------
T ss_pred cCCEEECCCCcccc-ccc--hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEEC
Confidence 44444444444442 333 34455555555555555 45544432 2345555555542 355666666
Q ss_pred CCCCCcc--ccCCCcCCCCCCcEEECCCCcceeccC
Q 002186 565 SHNSLSG--QIPAKFGSCSSLTVLNVSFNDISGSIP 598 (955)
Q Consensus 565 s~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~ip 598 (955)
++|++++ .+|.+ ++.|.+++|.+.+.+|
T Consensus 404 s~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~ 433 (454)
T 1jl5_A 404 ETNPLREFPDIPES------VEDLRMNSERVVDPYE 433 (454)
T ss_dssp ------------------------------------
T ss_pred CCCcCCccccchhh------HhheeCcCcccCCccc
Confidence 6666665 44432 3445556666555544
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-41 Score=386.30 Aligned_cols=410 Identities=22% Similarity=0.305 Sum_probs=252.7
Q ss_pred CcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCC-------------CEEEccCCcCCccC
Q 002186 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSL-------------ISLDISRNNFSGHF 141 (955)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l~~~~ 141 (955)
.++..++++++.+ |.+|+.+.. +++|++|++++|.+.|.+|.+++++++| ++|++++|.+++ +
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~--L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-l 86 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAEN--VKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-L 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-C
T ss_pred ccchhhhcccCch-hhCChhHhc--ccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-C
Confidence 3567788999999 999999888 8999999999999999999999998875 999999999986 4
Q ss_pred CccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCC
Q 002186 142 PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLK 221 (955)
Q Consensus 142 p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 221 (955)
|. ..++|++||+++|.+++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|.+++ +| +++.++
T Consensus 87 p~---~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~ 153 (454)
T 1jl5_A 87 PE---LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSS 153 (454)
T ss_dssp CS---CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCT
T ss_pred CC---CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCC
Confidence 44 24799999999999997 6754 4899999999999986 3332 2799999999999987 77 699999
Q ss_pred CCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEcc
Q 002186 222 TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLS 301 (955)
Q Consensus 222 ~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 301 (955)
+|++|++++|.+++ +|..+ .+|++|++++|.+++ +| .++++++|++|++++|++++ +|.. .++|++|+++
T Consensus 154 ~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~ 223 (454)
T 1jl5_A 154 FLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAG 223 (454)
T ss_dssp TCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECC
T ss_pred CCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECc
Confidence 99999999999986 66543 589999999999997 56 69999999999999999997 4433 2589999999
Q ss_pred CCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccC
Q 002186 302 DNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSI 381 (955)
Q Consensus 302 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~i 381 (955)
+|+++ .+| .++.+++|+.|++++|++++ +|.. +++|+.|++++|++++ +|.. .++|+.|++++|.+++ +
T Consensus 224 ~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l 292 (454)
T 1jl5_A 224 NNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-L 292 (454)
T ss_dssp SSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-E
T ss_pred CCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-c
Confidence 99999 567 49999999999999999986 5543 4799999999999986 5654 3789999999999986 2
Q ss_pred CCCCCCCCccceeeccCCCCCCCCCcCccCC-CCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhc
Q 002186 382 PPDICSGGVLFKLILFSNNFTGSLSPSLSNC-SSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQA 460 (955)
Q Consensus 382 p~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~ 460 (955)
|.. ...++.|++++|.+++. + .+ ++|++|++++|++++ +|.. +++|++|++++|+++ .+|. .+
T Consensus 293 ~~~---~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l 356 (454)
T 1jl5_A 293 SEL---PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LP 356 (454)
T ss_dssp SCC---CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CC
T ss_pred cCc---CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hh
Confidence 211 13455566666655541 1 12 355555555555554 3332 345555555555555 2333 23
Q ss_pred cCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCC--CCCCCCcCCccceEeccccccccccCCCCCccccccee
Q 002186 461 SKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITG--NLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERI 538 (955)
Q Consensus 461 ~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~--~~p~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L 538 (955)
++|++|++ ++|++++ .+|.. +. +++.|++.|.+|.. +++|+.|
T Consensus 357 ~~L~~L~L-------------------------~~N~l~~l~~ip~~-----l~--~L~~n~~~~~i~~~---~~~L~~L 401 (454)
T 1jl5_A 357 QNLKQLHV-------------------------EYNPLREFPDIPES-----VE--DLRMNSHLAEVPEL---PQNLKQL 401 (454)
T ss_dssp TTCCEEEC-------------------------CSSCCSSCCCCCTT-----CC--EEECCC------------------
T ss_pred hhccEEEC-------------------------CCCCCCcCCCChHH-----HH--hhhhcccccccccc---cCcCCEE
Confidence 44444544 4445544 33321 11 23456677777763 5788999
Q ss_pred eeccccccc--cchhhhcCCCCCcEEECCCCCCccccCCCcCC
Q 002186 539 DLANNKLIG--SIPEVLARLPVLGVLDLSHNSLSGQIPAKFGS 579 (955)
Q Consensus 539 ~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 579 (955)
|+++|++++ .+|. .++.|.+.+|.+.+.+|.....
T Consensus 402 ~ls~N~l~~~~~iP~------sl~~L~~~~~~~~~~~~~~~~~ 438 (454)
T 1jl5_A 402 HVETNPLREFPDIPE------SVEDLRMNSERVVDPYEFAHET 438 (454)
T ss_dssp -------------------------------------------
T ss_pred ECCCCcCCccccchh------hHhheeCcCcccCCccccCHHH
Confidence 999999987 6664 3566788899988877765443
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-41 Score=389.23 Aligned_cols=364 Identities=19% Similarity=0.160 Sum_probs=255.0
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccC-CccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF-PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
++|++|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|..+++|++|||++|.+++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 57999999999999999999999999999999999998655 56799999999999999999998899999999999999
Q ss_pred ecCCCCcccCCCC--cCCCCCCcEEEccCCCCCCCCchh-ccCCCCCcEEecccccccCCCCccccCC--CCCcEEeccC
Q 002186 180 LAGSYFSGPIPSQ--FGSFKSLEFLHLAGNLLNDQIPAE-LGMLKTVTHMEIGYNFYQGNIPWQLGNM--SEVQYLDIAG 254 (955)
Q Consensus 180 Ls~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~l~~n~l~g~~p~~~~~l--~~L~~L~Ls~ 254 (955)
|++|.+++.+|.. |+++++|++|+|++|.+++..|.. +..+++|++|++++|.+.+..|..+.++ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999866554 999999999999999999888876 8899999999999999998888888776 6889999999
Q ss_pred CCCCCCCCccc--------cCCCCCCEEEeccccccccCCccCcCC---CccCEEEccCCCCCCCCCcccCCCCCCcEEe
Q 002186 255 ANLSGSIPKEL--------SNLTKLESLFLFRNQLAGQVPWEFSRV---TTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323 (955)
Q Consensus 255 n~l~~~~p~~l--------~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 323 (955)
|.+.+..+..+ ..+++|++|++++|++++..|..+... ++|+.|++++|.+.+....
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~------------ 257 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFG------------ 257 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTT------------
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccc------------
Confidence 99887555432 356788888888888887777655443 7788888888766542110
Q ss_pred cccccCCCCCccccC--CCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCC
Q 002186 324 LMYNEMSGTVPESLV--QLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNF 401 (955)
Q Consensus 324 Ls~N~l~~~~p~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l 401 (955)
.+.+.+..+..+. ..++|+.|++++|.+++.+|..++.+++|+.|++++|.+.+..|..+..+..|+.|++++|.+
T Consensus 258 --~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (455)
T 3v47_A 258 --HTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL 335 (455)
T ss_dssp --CCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred --hhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCcc
Confidence 0111111111111 123444555555555444444444455555555555555444444444444555555555555
Q ss_pred CCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCC
Q 002186 402 TGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIP 479 (955)
Q Consensus 402 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p 479 (955)
.+..|..+.++++|++|+|++|++++..|..|..+++|++|++++|++++..+..+..+++|++|++++| .+.+.+|
T Consensus 336 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N-~l~~~~~ 412 (455)
T 3v47_A 336 GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN-PWDCSCP 412 (455)
T ss_dssp CEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS-CBCCCTT
T ss_pred CCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCC-CcccCCC
Confidence 4444555555566666666666665555555666666666666666665544444555556666666666 3334333
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=380.62 Aligned_cols=251 Identities=19% Similarity=0.223 Sum_probs=191.0
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc------CC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN------RH 759 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------~~ 759 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.. .+
T Consensus 55 ~Y~--~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 55 EYE--IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp SEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CeE--EEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 455 788999999999999984 689999999997532 234567889999999999999999999864 35
Q ss_pred eeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
..|||||||+ |+|.+++.. .+++.+...|+.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+..
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 7899999996 789999975 568888899999999999999999 9999999999999999999999999999764
Q ss_pred cccC------CCCcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-------------
Q 002186 838 QLAD------GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID------------- 897 (955)
Q Consensus 838 ~~~~------~~~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~------------- 897 (955)
.... .....++++|++||+..+. .++.++||||+|||+|||+||+.||.+..........
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 3221 1123477889999987764 5689999999999999999999999753321100000
Q ss_pred ----ccccccccccccCCCCchH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 898 ----GLLGEMYNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 898 ----~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..........+........ ....++.+++.+||..||++|||++|++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000000000000111 123567899999999999999999999864
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=375.62 Aligned_cols=196 Identities=14% Similarity=0.153 Sum_probs=165.8
Q ss_pred HhhhcccchhhhccCCCCCceEEEeC----CCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCee
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 761 (955)
+.+.|. ..+.||+|+||+||+|+. .+++.||||++.... ....+.+|+++|+++ +|||||++++++.+++..
T Consensus 19 l~~~Y~--i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 19 LSNVFK--IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGTCE--EEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred ccCcEE--EEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 344566 788999999999999973 467899999986543 344577899999988 699999999999999999
Q ss_pred EEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC-CCceECccccccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~-~~~ki~DfGl~~~~~~~ 840 (955)
|+|||||++|+|.++++ .+++.+...++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 96 ~lvmE~~~g~~L~~~~~-~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~ 171 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT 171 (361)
T ss_dssp EEEEECCCCCCHHHHHT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTC
T ss_pred EEEEeCCCcccHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc
Confidence 99999999999999985 488888999999999999999999 99999999999999876 79999999999754321
Q ss_pred C------------------------------CCCcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCC
Q 002186 841 D------------------------------GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGS 889 (955)
Q Consensus 841 ~------------------------------~~~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~ 889 (955)
. .....++++|++||+..+. .++.++||||+|||+|||+||+.||..+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 1 0112367889999988664 58899999999999999999999997554
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-40 Score=381.47 Aligned_cols=366 Identities=18% Similarity=0.160 Sum_probs=302.1
Q ss_pred CCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCC-chhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEE
Q 002186 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV-PAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLH 203 (955)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~-p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 203 (955)
++|++|||++|.+++..|..|+.+++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 78999999999999999999999999999999999998665 56799999999999999999998899999999999999
Q ss_pred ccCCCCCCCCchh--ccCCCCCcEEecccccccCCCCcc-ccCCCCCcEEeccCCCCCCCCCccccCC--CCCCEEEecc
Q 002186 204 LAGNLLNDQIPAE--LGMLKTVTHMEIGYNFYQGNIPWQ-LGNMSEVQYLDIAGANLSGSIPKELSNL--TKLESLFLFR 278 (955)
Q Consensus 204 L~~N~l~~~~p~~--l~~l~~L~~L~l~~n~l~g~~p~~-~~~l~~L~~L~Ls~n~l~~~~p~~l~~l--~~L~~L~L~~ 278 (955)
|++|.+++.+|.. +..+++|++|++++|.+.+..|.. +.++++|++|++++|.+++..|..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999998866665 888888888888888888777765 7788888888888888887777777665 5677777777
Q ss_pred ccccccCCccC--------cCCCccCEEEccCCCCCCCCCcccCCC---CCCcEEecccccCCCCCccccCCCCCccEEE
Q 002186 279 NQLAGQVPWEF--------SRVTTLKSLDLSDNRLSGPIPESFADL---KNLRLLSLMYNEMSGTVPESLVQLPSLEILF 347 (955)
Q Consensus 279 N~l~~~~p~~~--------~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 347 (955)
|.+.+..+..+ ..+++|++|++++|++++..|..+..+ ++|+.|++++|.+.+...
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~------------- 256 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF------------- 256 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT-------------
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc-------------
Confidence 77776554332 245667777777777776666555443 666677776666554311
Q ss_pred ccCCcCcccCCcccC--CCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCcc
Q 002186 348 IWNNYFSGSLPENLG--RNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSF 425 (955)
Q Consensus 348 L~~N~l~~~~p~~~~--~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 425 (955)
..+.+.+..+..+. ..++|+.|++++|.+.+.+|..+..+.+|+.|++++|.+.+..|..+.++++|++|+|++|++
T Consensus 257 -~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (455)
T 3v47_A 257 -GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL 335 (455)
T ss_dssp -TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred -chhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCcc
Confidence 11122222222222 236899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCC
Q 002186 426 SGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPF 505 (955)
Q Consensus 426 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~ 505 (955)
++..|..|..+++|++|+|++|++++..|..+..+++|++|++++| .+.+..+..+..+++|+.|++++|.+++..|..
T Consensus 336 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 336 GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTN-QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp CEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS-CCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCC-ccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 9988999999999999999999999998999999999999999999 677666666788999999999999999988753
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=375.03 Aligned_cols=360 Identities=17% Similarity=0.179 Sum_probs=187.5
Q ss_pred CCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCC
Q 002186 117 FPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSF 196 (955)
Q Consensus 117 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l 196 (955)
.+..++++++|++|++++|.+++. | .|+.+++|++|+|++|.+++. | ++++++|++|+|++|.+++. | |+++
T Consensus 34 ~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 34 DTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp SEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTC
T ss_pred cccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCC
Confidence 334455555555555555555542 3 355555555555555555542 2 45555555555555555542 2 5555
Q ss_pred CCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEe
Q 002186 197 KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFL 276 (955)
Q Consensus 197 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 276 (955)
++|++|++++|++++ +| ++.+++|++|++++|.+++. + ++++++|++|++++|...+.+ .+..+++|++|++
T Consensus 106 ~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 177 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDC 177 (457)
T ss_dssp TTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEEC
Confidence 555555555555544 22 44444444444444444431 1 444555555555555443333 2444555555555
Q ss_pred ccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCccc
Q 002186 277 FRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGS 356 (955)
Q Consensus 277 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 356 (955)
++|++++. | +..+++|+.|++++|++++. .++.+++|+.|++++|++++ +| +..+++|+.|++++|++++.
T Consensus 178 s~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 178 SFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC
T ss_pred CCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCc
Confidence 55555542 2 44555555555555555543 24455555555555555554 23 44445555555555554442
Q ss_pred CCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCC
Q 002186 357 LPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQL 436 (955)
Q Consensus 357 ~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 436 (955)
. ++.+++|+.|++++| +|+.|++++|++.+.+| ++.+
T Consensus 249 ~---~~~l~~L~~L~l~~n--------------------------------------~L~~L~l~~n~~~~~~~--~~~l 285 (457)
T 3bz5_A 249 D---VSTLSKLTTLHCIQT--------------------------------------DLLEIDLTHNTQLIYFQ--AEGC 285 (457)
T ss_dssp C---CTTCTTCCEEECTTC--------------------------------------CCSCCCCTTCTTCCEEE--CTTC
T ss_pred C---HHHCCCCCEEeccCC--------------------------------------CCCEEECCCCccCCccc--cccc
Confidence 2 223333444443332 23334444444444444 3344
Q ss_pred CCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceEec
Q 002186 437 PDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIES 516 (955)
Q Consensus 437 ~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l 516 (955)
++|+.|++++|.+.+.+|. ...+|+.|++++| ++|+.|++
T Consensus 286 ~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------------------------------~~L~~L~L 325 (457)
T 3bz5_A 286 RKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------------------------------PKLVYLYL 325 (457)
T ss_dssp TTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------------------------------TTCCEEEC
T ss_pred ccCCEEECCCCcccceecc---CCCcceEechhhc-------------------------------------ccCCEEEC
Confidence 5555555555555444442 2233444444443 24555666
Q ss_pred cccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceec
Q 002186 517 HMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGS 596 (955)
Q Consensus 517 ~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ 596 (955)
+.|++++. + ++++++|+.||+++|++++ ++.|+.|++++|.++|. ..+.+|+.+++++|+++|.
T Consensus 326 ~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ 389 (457)
T 3bz5_A 326 NNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIA 389 (457)
T ss_dssp TTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEE
T ss_pred CCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEE
Confidence 66666663 2 6677777777777777775 24566677777877776 2455677778888888888
Q ss_pred cCCc
Q 002186 597 IPSG 600 (955)
Q Consensus 597 ip~~ 600 (955)
||..
T Consensus 390 ip~~ 393 (457)
T 3bz5_A 390 VSPD 393 (457)
T ss_dssp CCTT
T ss_pred cChh
Confidence 8754
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-41 Score=389.77 Aligned_cols=244 Identities=11% Similarity=0.066 Sum_probs=193.5
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHH---HHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIV---SEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~---~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||++++... ..... .+++++++.++|||||++++++++++..
T Consensus 190 df~--i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 190 DFS--VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HeE--EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 366 888999999999999984 5899999999975321 12222 3446677888999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
|||||||+||+|.++|.+ .++......|+.||+.||+|||+. +||||||||+|||+|.++.+||+|||+|+....
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999999999976 567888889999999999999999 999999999999999999999999999987655
Q ss_pred cCCCCcccccccCchhhhh-ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 840 ADGSFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 840 ~~~~~~~~~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
.......++++|++||+.. +..++.++||||+||++|||+||+.||.+...... ........... ...+. ..
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~---~~i~~~i~~~~-~~~p~---~~ 417 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---HEIDRMTLTMA-VELPD---SF 417 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH---HHHHHHHHHCC-CCCCT---TS
T ss_pred CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHhhcCCC-CCCCc---cC
Confidence 4444456788899999985 46789999999999999999999999974322111 01111111111 11111 22
Q ss_pred HHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPS-----MEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt-----~~ev~~ 945 (955)
..++.+++.+||+.||++|++ ++||.+
T Consensus 418 S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 418 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 345778999999999999998 678765
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-41 Score=395.39 Aligned_cols=250 Identities=19% Similarity=0.235 Sum_probs=201.0
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.+.+.|. ..+.||+|+||+||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||||++++++.+++..||
T Consensus 154 ~il~~Y~--i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i 231 (573)
T 3uto_A 154 HVLDHYD--IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 231 (573)
T ss_dssp CGGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEE
T ss_pred cCccccE--EEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 3455676 788999999999999984 689999999997643 345678899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC--CCceECccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN--MEPHLAEFGFKYLTQ 838 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~--~~~ki~DfGl~~~~~ 838 (955)
|||||++|+|.++|.. .+++.+...++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++...
T Consensus 232 v~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 232 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred EEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999999999964 457888899999999999999999 99999999999999854 789999999998764
Q ss_pred ccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 839 LADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 839 ~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
..... ...++++|++||+..+..++.++||||+||++|||++|+.||.+..... .+..+..............
T Consensus 309 ~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~~ 382 (573)
T 3uto_A 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE------TLRNVKSCDWNMDDSAFSG 382 (573)
T ss_dssp TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTCCCCCSGGGTT
T ss_pred CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHhCCCCCCcccccC
Confidence 33221 2236778999999999999999999999999999999999997543211 1111111110000111122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+.+++.+||+.||++|||++|++++
T Consensus 383 ~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 383 ISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 34567789999999999999999999874
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=366.85 Aligned_cols=309 Identities=20% Similarity=0.216 Sum_probs=246.3
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+++|++|||++|.+++. | .+..+++|++|+|++|++++. | ++.+++|++|++++|.+++. | ++++++|++|+
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 78899999999999975 5 799999999999999999975 4 89999999999999999974 4 89999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++ +| ++++++|++|++++|++++. + ++.+++|+.|++++|...+.+ .++.+++|++|++++|++++
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce
Confidence 99999997 44 89999999999999999884 3 889999999999999777777 47889999999999999997
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
+| +..+++|+.|++++|++++. .+..+++|+.|++++|++++ +| ++.+++|+.|++++|++++.. +..
T Consensus 185 -l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~ 252 (457)
T 3bz5_A 185 -LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VST 252 (457)
T ss_dssp -CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTT
T ss_pred -ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HHH
Confidence 45 88899999999999999976 48899999999999999998 55 889999999999999999864 456
Q ss_pred CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+++|+.|+++.|. |+.|++++|.+.|.+|. ..+..|+.|++++|.+.+.+|. ..++|+.|+
T Consensus 253 l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~~--~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~ 313 (457)
T 3bz5_A 253 LSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQA--EGCRKIKELDVTHNTQLYLLDC---QAAGITELD 313 (457)
T ss_dssp CTTCCEEECTTCC--------------CSCCCCTTCTTCCEEEC--TTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCC
T ss_pred CCCCCEEeccCCC--------------CCEEECCCCccCCcccc--cccccCCEEECCCCcccceecc---CCCcceEec
Confidence 6778888877653 45677777777776662 3445666666666666555553 223344444
Q ss_pred CcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCC
Q 002186 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNN 471 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N 471 (955)
+++| ++|++|++++|++++. + +..+++|+.|++++|
T Consensus 314 l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N 349 (457)
T 3bz5_A 314 LSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNA 349 (457)
T ss_dssp CTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSS
T ss_pred hhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCC
Confidence 4333 4566666666666652 2 555555666666655
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-39 Score=354.92 Aligned_cols=257 Identities=26% Similarity=0.410 Sum_probs=208.2
Q ss_pred HhhhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.|. ..+.||+|+||.||+|+..+|+.||||++.... ...+.+.+|++++++++|||||+++++|.+.+..++||
T Consensus 37 ~~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (321)
T 2qkw_B 37 ATNNFD--HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIY 114 (321)
T ss_dssp CCCCCS--CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEE
T ss_pred HHhccC--ccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 345566 788999999999999999899999999987543 34667889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 766 DYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 766 ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
||+++|+|.+++.. ..+|.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 115 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 191 (321)
T 2qkw_B 115 KYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTE 191 (321)
T ss_dssp ECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSS
T ss_pred EcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999999965 368999999999999999999998 999999999999999999999999999875432
Q ss_pred cCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc---------ccccccccc
Q 002186 840 ADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID---------GLLGEMYNE 906 (955)
Q Consensus 840 ~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~---------~~~~~~~~~ 906 (955)
.... ...++..|.+||......++.++|||||||++|||+||+.||............ .......++
T Consensus 192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (321)
T 2qkw_B 192 LDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDP 271 (321)
T ss_dssp SSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSS
T ss_pred ccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcCh
Confidence 2111 122456688999988888999999999999999999999998754332111100 111222222
Q ss_pred cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 907 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
... .....+....+.+++.+||+.||++|||++|++++|+.+
T Consensus 272 ~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 313 (321)
T 2qkw_B 272 NLA--DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313 (321)
T ss_dssp SCT--TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhc--cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 211 122356678899999999999999999999999999865
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=357.51 Aligned_cols=259 Identities=30% Similarity=0.511 Sum_probs=207.3
Q ss_pred hhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
+.|. ..+.||+|+||.||+|...+|+.||||++..... ....+.+|++++++++|||||+++++|.+++..++|||
T Consensus 30 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 107 (326)
T 3uim_A 30 DNFS--NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 107 (326)
T ss_dssp TSSC--STTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEE
T ss_pred hccc--cceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEE
Confidence 4466 8899999999999999988999999999975332 23368899999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 767 YLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 767 y~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
|+++|+|.++++. ..+|..+..++.|+++||+|||+.+.++|+||||||+||+++.++.+||+|||+++.....
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 187 (326)
T 3uim_A 108 YMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187 (326)
T ss_dssp CCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSS
T ss_pred eccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcc
Confidence 9999999999975 2689999999999999999999998889999999999999999999999999999765432
Q ss_pred CCC---CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCC-----CCCC--Cccc----cccccccccc
Q 002186 841 DGS---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG-----SSLQ--NKPI----DGLLGEMYNE 906 (955)
Q Consensus 841 ~~~---~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~-----~~~~--~~~~----~~~~~~~~~~ 906 (955)
... ...++..|.+||......++.++||||+||++|||+||+.||... .... .+.. ........+.
T Consensus 188 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (326)
T 3uim_A 188 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV 267 (326)
T ss_dssp SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCT
T ss_pred cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcCh
Confidence 221 112456688999988888999999999999999999999998611 1000 0000 0111112221
Q ss_pred cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 907 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.. ......+....+.+++.+||+.||++|||++||+++|++..
T Consensus 268 ~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 268 DL--QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp TC--TTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hh--ccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 11 12233567788999999999999999999999999998654
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=356.64 Aligned_cols=257 Identities=18% Similarity=0.255 Sum_probs=198.8
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCC----eeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv~ey~~~ 770 (955)
..+.||+|+||.||+|+.. |+.||||+++..........+|+.++++++|||||++++++.... ..++||||+++
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 7889999999999999874 899999999766555556677899999999999999999998744 47999999999
Q ss_pred CChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcC-------CCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 771 GNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHD-------CYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 771 gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~-------~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|+|.++++. ..+|..+..++.|+++||+|||+. +.++|+||||||+||+++.++.+||+|||+++.......
T Consensus 107 g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~ 186 (322)
T 3soc_A 107 GSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186 (322)
T ss_dssp CBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSC
T ss_pred CCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccC
Confidence 999999976 568999999999999999999976 245899999999999999999999999999976543221
Q ss_pred C----CcccccccCchhhhhc-----cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccc----------ccccc
Q 002186 843 S----FPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG----------LLGEM 903 (955)
Q Consensus 843 ~----~~~~~~~~~~~e~~~~-----~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~----------~~~~~ 903 (955)
. ...++..|.+||...+ ..++.++|||||||++|||+||+.||............. .....
T Consensus 187 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (322)
T 3soc_A 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVV 266 (322)
T ss_dssp CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHH
T ss_pred ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhh
Confidence 1 1234566888998765 356678899999999999999999987543321111110 00000
Q ss_pred ccccccCC-CC--chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 904 YNENEVGS-SS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 904 ~~~~~~~~-~~--~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
......+. .. .......++.+++.+||+.||++|||++||++.|+.++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 267 VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp TTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 01100000 11 112345668899999999999999999999999988753
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=350.03 Aligned_cols=249 Identities=18% Similarity=0.268 Sum_probs=199.1
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc-cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG-ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
|. ..+.||+|+||+||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++.+++..++||||+
T Consensus 12 ~~--~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 12 LI--HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp EE--EEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ee--ccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 55 778999999999999995 57999999998653 334667899999999999999999999999999999999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
++|+|.++++. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 99999999975 568999999999999999999999 9999999999999999999999999998754322111
Q ss_pred --------------CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 844 --------------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 844 --------------~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
...++..|.+||...+..++.++|||||||++|||++|..|+.......... ........+.. .
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~ 244 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-GLNVRGFLDRY-C 244 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-SBCHHHHHHHT-C
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-hhhhhcccccc-C
Confidence 1224566889999988889999999999999999999998876432211110 00111111111 0
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+ .....+.+++.+||+.||++|||++|+++.|+.++
T Consensus 245 --~~---~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 245 --PP---NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp --CT---TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 01 11234678889999999999999999999998764
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=348.07 Aligned_cols=247 Identities=16% Similarity=0.228 Sum_probs=198.6
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
.+.|. ..+.||+|+||+||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||++++++...+..++||
T Consensus 19 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYT--RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBC--CCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhcee--eeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 34566 788999999999999984 689999999997543 34567889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 766 DYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 766 ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 97 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 173 (297)
T 3fxz_A 97 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (297)
T ss_dssp ECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred ECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccccc
Confidence 99999999999976 468888999999999999999999 9999999999999999999999999998765433221
Q ss_pred -CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 844 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 844 -~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...++..|.+||......++.++||||+||++|||+||+.||........ ........ .............+
T Consensus 174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~ 246 (297)
T 3fxz_A 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA------LYLIATNG-TPELQNPEKLSAIF 246 (297)
T ss_dssp CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHHC-SCCCSCGGGSCHHH
T ss_pred CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhCC-CCCCCCccccCHHH
Confidence 22356668899999888899999999999999999999999864322110 00000000 00011112233557
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+++.+||+.||++|||++|++++
T Consensus 247 ~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 247 RDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHccCChhHCcCHHHHhhC
Confidence 789999999999999999999863
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-39 Score=343.33 Aligned_cols=249 Identities=17% Similarity=0.252 Sum_probs=201.0
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|...++..||||+++......+.+.+|++++.+++||||+++++++.+++..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 77899999999999999988989999999876666778899999999999999999999999999999999999999999
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC---Ccccc
Q 002186 775 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---FPAKI 848 (955)
Q Consensus 775 ~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~---~~~~~ 848 (955)
+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ .....
T Consensus 92 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 168 (268)
T 3sxs_A 92 NYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP 168 (268)
T ss_dssp HHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCC
T ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcC
Confidence 99975 478999999999999999999999 9999999999999999999999999998754332211 11123
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
..|.+||......++.++||||+||++|||+| |+.||....... .............+.. ....+.+++.
T Consensus 169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~---~~~~l~~li~ 239 (268)
T 3sxs_A 169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE------VVLKVSQGHRLYRPHL---ASDTIYQIMY 239 (268)
T ss_dssp GGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHHHHHTTCCCCCCTT---SCHHHHHHHH
T ss_pred cccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH------HHHHHHcCCCCCCCCc---ChHHHHHHHH
Confidence 34788999888888999999999999999999 888875322110 0011111110100111 1245778899
Q ss_pred HccCCCCCCCCCHHHHHHHhhccCCCCC
Q 002186 928 LCTRSTPSDRPSMEEALKLLSGLKPHGK 955 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~L~~~~~~~~ 955 (955)
.||+.||++|||++|+++.|+.+++..|
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~~k 267 (268)
T 3sxs_A 240 SCWHELPEKRPTFQQLLSSIEPLREKDK 267 (268)
T ss_dssp HTTCSSGGGSCCHHHHHHHHGGGCC---
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhhccC
Confidence 9999999999999999999999987654
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=357.18 Aligned_cols=247 Identities=21% Similarity=0.264 Sum_probs=196.1
Q ss_pred hcccchhhhccCCCCCceEEEeC--------CCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNR 758 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~--------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 758 (955)
.|. ..+.||+|+||.||+|+. .++..||||+++.... ..+.+.+|+++++++ +|||||+++++|.++
T Consensus 82 ~~~--~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 82 KLT--LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GEE--EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HCE--eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 355 778899999999999974 3567899999976432 356788999999999 899999999999999
Q ss_pred CeeEEEEeecCCCChhHHhhcC------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 759 HQAYLLYDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~~------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
+..|+||||+++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 9999999999999999999752 57888999999999999999999 99999999999999
Q ss_pred CCCCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
+.++.+||+|||+++........ ...++..|.+||+..+..++.++|||||||++|||+| |+.||..... .
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-~--- 312 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-E--- 312 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-G---
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-H---
Confidence 99999999999998754332211 1113345889999888889999999999999999999 8888764221 1
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.....+...... .........+.+++.+||+.||++|||++|+++.|+.+
T Consensus 313 --~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 313 --ELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp --GHHHHHHTTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111111111001 01112234577899999999999999999999999875
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=342.96 Aligned_cols=247 Identities=20% Similarity=0.266 Sum_probs=200.4
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|...+++.||||++.......+.+.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 77889999999999999888999999999876666778999999999999999999999999999999999999999999
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---CCCcccc
Q 002186 775 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAKI 848 (955)
Q Consensus 775 ~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~---~~~~~~~ 848 (955)
+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... .....+.
T Consensus 94 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 170 (269)
T 4hcu_A 94 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 170 (269)
T ss_dssp HHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCC
T ss_pred HHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccc
Confidence 99965 368889999999999999999999 99999999999999999999999999987543221 1111123
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
..|.+||......++.++||||+||++|||+| |+.||...... .....+........+. .....+.+++.
T Consensus 171 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~li~ 241 (269)
T 4hcu_A 171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDISTGFRLYKPR---LASTHVYQIMN 241 (269)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTTCCCCCCT---TSCHHHHHHHH
T ss_pred cccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH------HHHHHHhcCccCCCCC---cCCHHHHHHHH
Confidence 45788999988889999999999999999999 78777632211 1111111110011011 12345778899
Q ss_pred HccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 928 LCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
+||+.||++|||++|++++|+++...
T Consensus 242 ~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 242 HCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHccCCcccCcCHHHHHHHHHHHHHc
Confidence 99999999999999999999987654
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=346.94 Aligned_cols=252 Identities=18% Similarity=0.219 Sum_probs=189.8
Q ss_pred hhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHh--ccCCCCceeEeEEEEc----CCeeE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIG--TVRHKNLIRLLGFCYN----RHQAY 762 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~--~l~H~niv~l~g~~~~----~~~~~ 762 (955)
+.|. ..+.||+|+||.||+|+. +|+.||||++.... .+.+.+|.+++. +++|||||++++++.. .+..+
T Consensus 8 ~~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 8 RDIT--LLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGCE--EEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred CcEE--EEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 3465 788999999999999987 79999999997543 333444555544 4899999999999764 34689
Q ss_pred EEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHh--------cCCCCCcccCCCCCCCeeeCCCCCceECcccc
Q 002186 763 LLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLH--------HDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH--------~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl 833 (955)
+||||+++|+|.++++. ..++..+..++.|+++||+||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 99999999999999975 5689999999999999999999 66 999999999999999999999999999
Q ss_pred cccccccCCC------CcccccccCchhhhhcc------CCcccccchhHHHHHHHHHhC----------CCCCCCCCCC
Q 002186 834 KYLTQLADGS------FPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTN----------GRLTNAGSSL 891 (955)
Q Consensus 834 ~~~~~~~~~~------~~~~~~~~~~~e~~~~~------~~~~~~DV~S~Gvvl~Elltg----------~~p~~~~~~~ 891 (955)
++........ ...++..|.+||..... .++.++|||||||++|||+|| +.||......
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 8754332211 12355668889988765 455789999999999999999 6666532221
Q ss_pred CCccccccccccc--cccccCCCC--chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 892 QNKPIDGLLGEMY--NENEVGSSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 892 ~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.... . ...... .......+. ........+.+++.+||+.||++|||++||++.|+++
T Consensus 240 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSF-E-DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCH-H-HHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred Ccch-h-hhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1100 0 000000 000000011 1234567788999999999999999999999999876
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=349.63 Aligned_cols=244 Identities=20% Similarity=0.255 Sum_probs=190.7
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||+||+|+. +|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..++||||+++|
T Consensus 41 i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 778999999999999986 68899999997543 23457889999999999999999999999999999999999999
Q ss_pred ChhHHhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCC--cccCCCCCCCeeeCCCCCceECcccccccccccCC--
Q 002186 772 NLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 842 (955)
Q Consensus 772 sL~~~l~~~-----~~~~~~~~i~~~ia~gl~~lH~~~~~~--iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-- 842 (955)
+|.+++... .++.++..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++.......
T Consensus 120 ~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 196 (309)
T 3p86_A 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196 (309)
T ss_dssp BHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred cHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccc
Confidence 999999763 68888999999999999999998 6 99999999999999999999999999875433211
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccc-cccccCCCCchHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY-NENEVGSSSSLQDEIKL 921 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 921 (955)
....++..|.+||......++.++|||||||++|||+||+.||....... ...... .......+ ......
T Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~ 267 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ------VVAAVGFKCKRLEIP---RNLNPQ 267 (309)
T ss_dssp -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH------HHHHHHHSCCCCCCC---TTSCHH
T ss_pred ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhcCCCCCCC---ccCCHH
Confidence 12235566889999988889999999999999999999999986432110 000000 00001011 122345
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 268 l~~li~~~l~~dP~~Rps~~~ll~~L~~~~ 297 (309)
T 3p86_A 268 VAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297 (309)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 778999999999999999999999998663
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=351.67 Aligned_cols=247 Identities=17% Similarity=0.188 Sum_probs=198.6
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
+.|. ..+.||+|+||.||+|+. .+|+.||+|.++......+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus 5 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 5 EKYM--IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hceE--eeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 4455 778899999999999985 4789999999986655667788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC--CCCceECcccccccccccCC
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~--~~~~ki~DfGl~~~~~~~~~ 842 (955)
|++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 999999999975 468889999999999999999999 9999999999999997 78999999999876543221
Q ss_pred C-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 843 S-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 843 ~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
. ...++++|.+||......++.++||||+||++|||+||+.||...... .....+.................+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~~~~~s~~ 233 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ------QIIENIMNAEYTFDEEAFKEISIE 233 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTCCCCCHHHHTTSCHH
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH------HHHHHHHcCCCCCChhhhccCCHH
Confidence 1 122556788999988878899999999999999999999998743211 111111111100000011123456
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.+++.+||+.||++|||++|++++
T Consensus 234 ~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 234 AMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHcCCChhHCcCHHHHhcC
Confidence 7899999999999999999999873
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=348.75 Aligned_cols=242 Identities=17% Similarity=0.209 Sum_probs=194.7
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 16 ~y~--~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 16 NYR--LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp TEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CEE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 455 788999999999999995 689999999997543 23456789999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 99999999999864 568888899999999999999999 999999999999999999999999999876543221
Q ss_pred CCcccccccCchhhhhccCCc-ccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEE-MYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~-~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
....++++|.+||...+..+. .++||||+||++|||+||+.||...... .....+.... ...+. .....
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~i~~~~-~~~p~---~~s~~ 240 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK------ELRERVLRGK-YRIPF---YMSTD 240 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSCHH
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCC-CCCCC---CCCHH
Confidence 122356678899998877654 7899999999999999999998743211 1111111111 10011 12245
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.+++.+||+.||++|||++|++++
T Consensus 241 ~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 241 CENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcC
Confidence 6788999999999999999999864
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=351.39 Aligned_cols=250 Identities=18% Similarity=0.161 Sum_probs=198.9
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-------hHHHHHHHHHHHhccCCCCceeEeEEEE
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCY 756 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~ 756 (955)
.++.+.|. ..+.||+|+||.||+|+. .+|+.||||.++.... ..+.+.+|++++++++|||||++++++.
T Consensus 8 ~~~~~~y~--~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 85 (361)
T 2yab_A 8 QKVEDFYD--IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE 85 (361)
T ss_dssp SCGGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred CChhhceE--EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE
Confidence 34445566 788999999999999985 5799999999975322 2467889999999999999999999999
Q ss_pred cCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC----CceECc
Q 002186 757 NRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAE 830 (955)
Q Consensus 757 ~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~----~~ki~D 830 (955)
+.+..++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 86 ~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 86 NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 99999999999999999999975 467888999999999999999999 999999999999998776 799999
Q ss_pred ccccccccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 831 FGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 831 fGl~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
||+++....... ....+++.|.+||+.....++.++||||+||++|||++|..||...... .....+......
T Consensus 163 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~------~~~~~i~~~~~~ 236 (361)
T 2yab_A 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANITAVSYD 236 (361)
T ss_dssp CSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHTTCCC
T ss_pred cCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcCCC
Confidence 999976543322 2223667789999998888999999999999999999999999743211 111111111100
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...+.+......+.+++.+||..||++|||++|+++
T Consensus 237 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000011122355778999999999999999999985
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=356.72 Aligned_cols=247 Identities=19% Similarity=0.277 Sum_probs=188.9
Q ss_pred hcccchhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|+.. ++..||||+++... ...+.+.+|++++++++|||||+++|+|.+.+..++
T Consensus 46 ~~~--~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 46 NIS--IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GCC--CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hce--eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 355 7889999999999999864 67889999997542 235678899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||+++|+|.++++. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 9999999999999976 468999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCC---c--ccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCc
Q 002186 841 DGSF---P--AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 914 (955)
Q Consensus 841 ~~~~---~--~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (955)
.... . .....|.+||+.....++.++|||||||++|||+| |+.||...... .....+.........
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~------~~~~~i~~~~~~~~~-- 272 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPP-- 272 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH------HHHHHHHTTEECCCC--
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCCCCC--
Confidence 2111 1 12234788999988889999999999999999998 88888643211 011111110001001
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 915 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 915 ~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
......+.+++.+||+.||++||+|+||+++|+.+
T Consensus 273 -~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 273 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp -TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 12235677899999999999999999999999865
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=365.99 Aligned_cols=245 Identities=17% Similarity=0.267 Sum_probs=198.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|...++..||||+++......+.+.+|++++++++|||||++++++. .+..++|||||++|+|.
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 67889999999999999988999999999876666788999999999999999999999986 56789999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---CCCccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAK 847 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~---~~~~~~ 847 (955)
++++. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ......
T Consensus 271 ~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 347 (454)
T 1qcf_A 271 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 347 (454)
T ss_dssp HHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSS
T ss_pred HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcc
Confidence 99975 568888999999999999999999 99999999999999999999999999997653211 111112
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||......++.++|||||||++|||+| |+.||...... .....+........+ ......+.+++
T Consensus 348 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~------~~~~~i~~~~~~~~~---~~~~~~l~~li 418 (454)
T 1qcf_A 348 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP------EVIRALERGYRMPRP---ENCPEELYNIM 418 (454)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHHHTCCCCCC---TTSCHHHHHHH
T ss_pred cccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCCCCC---CCCCHHHHHHH
Confidence 334788899888889999999999999999999 88888642211 011111111001111 12335677899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
.+||+.||++||||++|++.|+.+..
T Consensus 419 ~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 419 MRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred HHHccCChhHCcCHHHHHHHHHHHHh
Confidence 99999999999999999999998743
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-38 Score=345.28 Aligned_cols=242 Identities=15% Similarity=0.222 Sum_probs=195.5
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|++++++++|||||+++++|...+..++||||+++|+
T Consensus 49 ~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 128 (321)
T 2c30_A 49 SYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCB
T ss_pred ccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCC
Confidence 5568999999999999965 89999999997543 345678899999999999999999999999999999999999999
Q ss_pred hhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccccc
Q 002186 773 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIA 849 (955)
Q Consensus 773 L~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~~ 849 (955)
|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....++.
T Consensus 129 L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 205 (321)
T 2c30_A 129 LTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTP 205 (321)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCG
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCc
Confidence 9999876 578999999999999999999998 999999999999999999999999999876543221 1223556
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
.|.+||+.....++.++|||||||++|||+||+.||....... ....+.... .............+.+++.+|
T Consensus 206 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~ 278 (321)
T 2c30_A 206 YWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ------AMKRLRDSP-PPKLKNSHKVSPVLRDFLERM 278 (321)
T ss_dssp GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSS-CCCCTTGGGSCHHHHHHHHHH
T ss_pred cccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHhcCC-CCCcCccccCCHHHHHHHHHH
Confidence 6889999988889999999999999999999999987432111 011111110 000111112234577888999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 002186 930 TRSTPSDRPSMEEALKL 946 (955)
Q Consensus 930 l~~dp~~RPt~~ev~~~ 946 (955)
|+.||++|||++|+++.
T Consensus 279 l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 279 LVRDPQERATAQELLDH 295 (321)
T ss_dssp SCSSTTTSCCHHHHHTS
T ss_pred ccCChhhCcCHHHHhcC
Confidence 99999999999999874
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=349.44 Aligned_cols=244 Identities=19% Similarity=0.262 Sum_probs=194.2
Q ss_pred hhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.||+|+||.||+|... .+..||||+++... ...+.+.+|++++++++|||||+++++|.+.+..++||||+
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 7789999999999999963 45569999997632 33567889999999999999999999999999999999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 844 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~- 844 (955)
++|+|.++++. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 133 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (325)
T 3kul_A 133 ENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209 (325)
T ss_dssp TTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCE
T ss_pred CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCcccee
Confidence 99999999964 568999999999999999999999 99999999999999999999999999987654322111
Q ss_pred ----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 845 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 845 ----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
...+..|.+||...+..++.++|||||||++|||+| |+.||...... .....+......... ....
T Consensus 210 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~------~~~~~~~~~~~~~~~---~~~~ 280 (325)
T 3kul_A 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR------DVISSVEEGYRLPAP---MGCP 280 (325)
T ss_dssp ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH------HHHHHHHTTCCCCCC---TTCC
T ss_pred eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH------HHHHHHHcCCCCCCC---CCcC
Confidence 112335788999888889999999999999999999 88888643211 011111111101111 1223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
..+.+++..||+.||++|||++||++.|+.+
T Consensus 281 ~~l~~li~~~l~~dp~~Rps~~eil~~L~~l 311 (325)
T 3kul_A 281 HALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311 (325)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 4677899999999999999999999999876
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=358.31 Aligned_cols=246 Identities=18% Similarity=0.222 Sum_probs=195.7
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|+.. +|+.||||.++.... ..+.+.+|++++++++|||||+++|+|.+++..++|||||++|
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 6788999999999999965 899999999875422 2346788999999999999999999999999999999999999
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC----CCC
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD----GSF 844 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~----~~~ 844 (955)
+|.++++. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 198 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~ 274 (377)
T 3cbl_A 198 DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL 274 (377)
T ss_dssp BHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSC
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCC
Confidence 99999975 478999999999999999999999 99999999999999999999999999987533211 111
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
......|.+||......++.++|||||||++|||+| |+.|+....... ....+.. ......+. .....+.
T Consensus 275 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~---~~~~~~~---~~~~~~~~---~~~~~l~ 345 (377)
T 3cbl_A 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ---TREFVEK---GGRLPCPE---LCPDAVF 345 (377)
T ss_dssp CEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH---HHHHHHT---TCCCCCCT---TCCHHHH
T ss_pred CCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHc---CCCCCCCC---CCCHHHH
Confidence 112344788898888889999999999999999999 887775422110 0001101 00011111 1234577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
+++.+||+.||++|||++|+++.|++++.
T Consensus 346 ~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 346 RLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 88999999999999999999999988753
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-38 Score=338.55 Aligned_cols=248 Identities=15% Similarity=0.184 Sum_probs=197.9
Q ss_pred hcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
.|. ..+.||+|+||.||+|...++..||||+++......+.+.+|++++++++||||++++++|.+.+..++||||++
T Consensus 25 ~y~--~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 25 DLT--FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 102 (283)
T ss_dssp GEE--EEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred HHH--hHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence 355 778999999999999999889999999998766667788999999999999999999999999999999999999
Q ss_pred CCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---CC
Q 002186 770 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GS 843 (955)
Q Consensus 770 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~---~~ 843 (955)
+|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (283)
T 3gen_A 103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179 (283)
T ss_dssp TCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence 9999999965 578999999999999999999999 99999999999999999999999999987543221 11
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
....+..|.+||......++.++||||+||++|||+| |+.||...... .....+.......... .....+
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~l 250 (283)
T 3gen_A 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS------ETAEHIAQGLRLYRPH---LASEKV 250 (283)
T ss_dssp STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHHTTCCCCCCT---TCCHHH
T ss_pred CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh------HHHHHHhcccCCCCCC---cCCHHH
Confidence 1112345788999888889999999999999999999 88887643211 0111111110000011 112457
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+++.+||+.||++|||++|+++.|+++.
T Consensus 251 ~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 251 YTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 78899999999999999999999998763
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=344.27 Aligned_cols=251 Identities=18% Similarity=0.188 Sum_probs=199.0
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-------hHHHHHHHHHHHhccCCCCceeEeEEEE
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCY 756 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~ 756 (955)
.++.+.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++|||||++++++.
T Consensus 7 ~~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 84 (326)
T 2y0a_A 7 ENVDDYYD--TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE 84 (326)
T ss_dssp SCHHHHEE--EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred CCcccceE--eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 34555677 788999999999999995 5799999999975321 3567889999999999999999999999
Q ss_pred cCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC----CceECc
Q 002186 757 NRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAE 830 (955)
Q Consensus 757 ~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~----~~ki~D 830 (955)
+.+..++||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 85 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D 161 (326)
T 2y0a_A 85 NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIID 161 (326)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred eCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence 99999999999999999999975 467888999999999999999999 999999999999999887 799999
Q ss_pred ccccccccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 831 FGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 831 fGl~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
||+++....... ....+++.|.+||+.....++.++||||+||++|||+||+.||....... ....+......
T Consensus 162 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~~~~~~~~ 235 (326)
T 2y0a_A 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANVSAVNYE 235 (326)
T ss_dssp CTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHHTCCC
T ss_pred CCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHHHhcCCC
Confidence 999876543222 12235666889999988889999999999999999999999986432110 11111100000
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
............+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000011223457789999999999999999999873
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=354.20 Aligned_cols=251 Identities=17% Similarity=0.136 Sum_probs=197.9
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCe
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 760 (955)
..+.+.|. ..+.||+|+||+||+|. ..+|+.||+|++..... ..+.+.+|++++++++|||||++++++.+++.
T Consensus 7 ~~~~~~Y~--i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 84 (444)
T 3soa_A 7 TRFTEEYQ--LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGH 84 (444)
T ss_dssp CHHHHHEE--EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSE
T ss_pred ccccCCeE--EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCE
Confidence 44556677 88899999999999998 46899999999975432 34568899999999999999999999999999
Q ss_pred eEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC---CCCCceECcccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD---ENMEPHLAEFGFKY 835 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~---~~~~~ki~DfGl~~ 835 (955)
.|+|||||++|+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++
T Consensus 85 ~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 85 HYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 9999999999999999875 467888899999999999999999 999999999999998 45789999999997
Q ss_pred cccccCCC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 836 LTQLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 836 ~~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
........ ...++++|.+||+.....++.++||||+||++|||++|+.||...... .....+.........+
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~~~~ 235 (444)
T 3soa_A 162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH------RLYQQIKAGAYDFPSP 235 (444)
T ss_dssp CCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTCCCCCTT
T ss_pred EecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHhCCCCCCcc
Confidence 65433221 223567789999998888999999999999999999999998643211 0111111111000111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+......+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 236 EWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 112233567789999999999999999999873
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-38 Score=366.80 Aligned_cols=247 Identities=21% Similarity=0.247 Sum_probs=199.2
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
..+.||+|+||.||+|+.. ++..||||.++......+.+.+|+++|++++|||||+++|+|.+.+..++|||||++|+|
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 6788999999999999965 589999999987666677899999999999999999999999999999999999999999
Q ss_pred hHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC---Ccc
Q 002186 774 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---FPA 846 (955)
Q Consensus 774 ~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~---~~~ 846 (955)
.++++. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........ ...
T Consensus 304 ~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 380 (495)
T 1opk_A 304 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 380 (495)
T ss_dssp HHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCC
T ss_pred HHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCc
Confidence 999974 367889999999999999999999 9999999999999999999999999999765322111 111
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
....|.+||......++.++|||||||++|||+| |+.|+....... . ...+..... ...+ ......+.++
T Consensus 381 ~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~-~~~~~~~~~---~~~~---~~~~~~l~~l 451 (495)
T 1opk_A 381 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--V-YELLEKDYR---MERP---EGCPEKVYEL 451 (495)
T ss_dssp CCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--H-HHHHHTTCC---CCCC---TTCCHHHHHH
T ss_pred CCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--H-HHHHHcCCC---CCCC---CCCCHHHHHH
Confidence 2334788898888889999999999999999999 777776432111 0 011111110 1111 1223457788
Q ss_pred HHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 926 ALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
+.+||+.||++||||+|+++.|+.+...
T Consensus 452 i~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 452 MRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999987543
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=343.65 Aligned_cols=255 Identities=17% Similarity=0.276 Sum_probs=194.7
Q ss_pred hcccchhhhccCCCCCceEEEe-----CCCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcC--Cee
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-----~~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~ 761 (955)
.|. ..+.||+|+||.||+|+ ..+|+.||||++.... ...+.+.+|++++++++|||||+++++|... ...
T Consensus 11 ~~~--~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 11 HLK--FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GEE--EEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred Hhh--hhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 355 78899999999999997 3478999999997543 3356788999999999999999999999653 568
Q ss_pred EEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
++||||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 999999999999999965 378999999999999999999998 99999999999999999999999999987654
Q ss_pred ccCCC-----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCC---------CCCcccc-cccccc
Q 002186 839 LADGS-----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSS---------LQNKPID-GLLGEM 903 (955)
Q Consensus 839 ~~~~~-----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~---------~~~~~~~-~~~~~~ 903 (955)
..... ...+...|.+||......++.++|||||||++|||+||..|+..... ....... ......
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence 32211 11234457888998888899999999999999999999988752110 0000000 000001
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 904 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
...... +.......++.+++.+||+.||++|||++|++++|+.++.
T Consensus 246 ~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 246 KNNGRL---PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HTTCCC---CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccCcC---CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 011101 1111233567789999999999999999999999987753
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=340.61 Aligned_cols=261 Identities=18% Similarity=0.239 Sum_probs=196.6
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
+.+.++|. ..+.||+|+||+||+|...+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..
T Consensus 17 q~l~~~y~--~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 94 (311)
T 3niz_A 17 QGLMEKYQ--KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94 (311)
T ss_dssp ECSSCEEE--EEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCE
T ss_pred cchHhhhH--hhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEE
Confidence 34445676 8899999999999999998899999999975322 246678999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
++||||++ |+|.+.+.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 95 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 95 TLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp EEEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred EEEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 99999998 588888865 367888899999999999999999 99999999999999999999999999997654
Q ss_pred ccCCC--CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-ccccccc----------
Q 002186 839 LADGS--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLGEMY---------- 904 (955)
Q Consensus 839 ~~~~~--~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~~~~~---------- 904 (955)
..... ...++.+|.+||...+ ..++.++||||+||++|||+||+.||............ .......
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL 250 (311)
T ss_dssp SCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTS
T ss_pred CCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhcc
Confidence 32211 1234566888998765 56899999999999999999999998743322110000 0000000
Q ss_pred ----ccc-ccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhccC
Q 002186 905 ----NEN-EVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLK 951 (955)
Q Consensus 905 ----~~~-~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~~ 951 (955)
+.. ........ +....++.+++.+||+.||++|||++|++++ ++++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence 000 00000000 1123467899999999999999999999973 45543
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=350.10 Aligned_cols=246 Identities=18% Similarity=0.155 Sum_probs=191.8
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
|.+...+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||+++++|.+.+..++||||+
T Consensus 89 ~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168 (373)
T ss_dssp EEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 4434567899999999999984 689999999997643 34667889999999999999999999999999999999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee--CCCCCceECcccccccccccCCC
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF--DENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl--~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++........
T Consensus 169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~ 245 (373)
T 2x4f_A 169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245 (373)
T ss_dssp TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc
Confidence 99999998864 478899999999999999999999 99999999999999 67788999999998765433221
Q ss_pred -CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 844 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 844 -~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...++..|.+||+.....++.++|||||||++|||+||+.||....... ....+....+.............+
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~ 319 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE------TLNNILACRWDLEDEEFQDISEEA 319 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTCCCSCSGGGTTSCHHH
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhccCCCChhhhccCCHHH
Confidence 2235667889999988889999999999999999999999987432211 111111111010011112233567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.+++.+||+.||++|||++|+++
T Consensus 320 ~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 320 KEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHcCCChhhCCCHHHHhc
Confidence 88999999999999999999987
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-38 Score=360.62 Aligned_cols=243 Identities=19% Similarity=0.237 Sum_probs=194.2
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCC-eeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-QAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv~ey~~~gsL 773 (955)
..+.||+|+||.||+|... |+.||||+++... ..+.+.+|+++|++++|||||+++|+|.+.+ ..++|||||++|+|
T Consensus 197 ~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 6788999999999999874 8899999997543 4567889999999999999999999988765 78999999999999
Q ss_pred hHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccccc
Q 002186 774 SEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 849 (955)
Q Consensus 774 ~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~ 849 (955)
.++++.. .++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......... ....
T Consensus 275 ~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~-~~~~ 350 (450)
T 1k9a_A 275 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-KLPV 350 (450)
T ss_dssp HHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-------CCCT
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC-CCCc
Confidence 9999752 57888999999999999999999 99999999999999999999999999987543222111 2234
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
.|.+||......++.++|||||||++|||+| |+.|+....... ....+........+ ......+.+++.+
T Consensus 351 ~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~p---~~~~~~l~~li~~ 421 (450)
T 1k9a_A 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD------VVPRVEKGYKMDAP---DGCPPAVYDVMKN 421 (450)
T ss_dssp TTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT------HHHHHHTTCCCCCC---TTCCHHHHHHHHH
T ss_pred ceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCC---CcCCHHHHHHHHH
Confidence 4788999988889999999999999999999 888886432211 11111111001111 1223567789999
Q ss_pred ccCCCCCCCCCHHHHHHHhhccCC
Q 002186 929 CTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
||+.||++|||++|+++.|+.+..
T Consensus 422 cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 422 CWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999988754
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=338.69 Aligned_cols=253 Identities=17% Similarity=0.180 Sum_probs=197.5
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
+|. ..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++.+++++|||||++++++.+++..++|
T Consensus 12 ~y~--i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 12 RYK--IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp TEE--EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred cEE--EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 455 788999999999999984 589999999985422 2346788999999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 999999999999975 468999999999999999999999 999999999999999999999999999876543221
Q ss_pred C---CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 843 S---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 843 ~---~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ...++..|.+||...+..++.++||||+||++|||+||+.||........ .............. ....+..
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~ 241 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI--AIKHIQDSVPNVTT---DVRKDIP 241 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH--HHHHHSSCCCCHHH---HSCTTSC
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHhhccCCCcch---hcccCCC
Confidence 1 12245668899999888899999999999999999999999874321110 00000000000000 0001223
Q ss_pred HHHHHHHHHccCCCCCCCC-CHHHHHHHhhccCC
Q 002186 920 KLVLDVALLCTRSTPSDRP-SMEEALKLLSGLKP 952 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RP-t~~ev~~~L~~~~~ 952 (955)
..+.+++.+|++.||++|| +++++.+.|+.+..
T Consensus 242 ~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 242 QSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 5577889999999999998 89999999987644
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=341.76 Aligned_cols=242 Identities=12% Similarity=0.077 Sum_probs=195.0
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus 6 ~y~--~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 6 DFD--YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HeE--EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 355 788999999999999985 579999999997532 2355678899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999999999975 467888899999999999999999 999999999999999999999999999875322211
Q ss_pred --CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 843 --SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 843 --~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
....+++.|.+||+..+..++.++||||+||++|||+||+.||...... .....+.... ...+. ....
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~s~ 230 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------RLFELILMEE-IRFPR---TLSP 230 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSCH
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH------HHHHHHHcCC-CCCCC---CCCH
Confidence 1223567788999998888999999999999999999999998743211 1111111111 11111 1234
Q ss_pred HHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002186 921 LVLDVALLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
++.+++.+||+.||++|| +++|++++
T Consensus 231 ~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 567888999999999999 89999764
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=347.17 Aligned_cols=250 Identities=17% Similarity=0.175 Sum_probs=197.8
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..
T Consensus 26 ~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~ 103 (362)
T 2bdw_A 26 KFSDNYD--VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH 103 (362)
T ss_dssp HHHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CcccCeE--EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence 3445576 788999999999999985 579999999997543 2345688999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC---CCceECccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYL 836 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~DfGl~~~ 836 (955)
|+||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.+ +.+||+|||+++.
T Consensus 104 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 104 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp EEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 999999999999999865 457888999999999999999999 99999999999999865 4599999999876
Q ss_pred ccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 837 TQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 837 ~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
....... ...+++.|.+||+.....++.++||||+||++|||+||+.||....... ....+.........+.+
T Consensus 181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~ 254 (362)
T 2bdw_A 181 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR------LYAQIKAGAYDYPSPEW 254 (362)
T ss_dssp CTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCCCTTGG
T ss_pred ecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCCCCCCcccc
Confidence 5433221 2235667889999988889999999999999999999999987432110 11111111100011122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
......+.+++.+||+.||++|||++|++++
T Consensus 255 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 255 DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 2334567789999999999999999999864
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-38 Score=351.53 Aligned_cols=248 Identities=16% Similarity=0.183 Sum_probs=194.2
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.|. ..+.||+|+||+||+|+. .+++.||||+++.. ......+.+|+.++++++|||||++++++.+.+..
T Consensus 72 ~~~--~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 72 NIT--LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GEE--EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HeE--EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 355 778899999999999983 36789999999653 22345688899999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc---------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC---CceEC
Q 002186 762 YLLYDYLPNGNLSEKIRT---------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EPHLA 829 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~---------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~---~~ki~ 829 (955)
++|||||++|+|.++++. ..++.++..++.|+++||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999975 367889999999999999999999 999999999999999554 59999
Q ss_pred cccccccccccC----CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccc
Q 002186 830 EFGFKYLTQLAD----GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 830 DfGl~~~~~~~~----~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
|||+++...... .....++..|.+||......++.++|||||||++|||+| |..||...... .....+.
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~------~~~~~i~ 300 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEFVT 300 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHH
Confidence 999987543221 111223456889999888889999999999999999998 88887643211 0111111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
........ ......+.+++.+||+.||++|||++||+++|+.+.
T Consensus 301 ~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 301 SGGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp TTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCC---ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 11101111 122345778999999999999999999999997653
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=342.80 Aligned_cols=261 Identities=18% Similarity=0.217 Sum_probs=192.1
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHh--ccCCCCceeEeEEEEcC----C
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIG--TVRHKNLIRLLGFCYNR----H 759 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~--~l~H~niv~l~g~~~~~----~ 759 (955)
.+.+.|. ..+.||+|+||.||+|+.. |+.||||++...... .+.+|.+++. .++|||||++++++... +
T Consensus 34 ~~~~~y~--~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~--~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 34 TIAKQIQ--MVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEA--SWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp THHHHCE--EEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGHH--HHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred ccccceE--EEeEeecCCCeEEEEEEEC-CceEEEEEEeccccc--hhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 4455677 8899999999999999874 899999999754332 3333444444 45999999999999876 7
Q ss_pred eeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCC-----CCCcccCCCCCCCeeeCCCCCceECcccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC-----YPAIPHGDLKASNIVFDENMEPHLAEFGF 833 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~-----~~~iiHrdlk~~NiLl~~~~~~ki~DfGl 833 (955)
..++||||+++|+|.++++. ..++.....++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~ 188 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCC
Confidence 89999999999999999975 5689999999999999999999762 45899999999999999999999999999
Q ss_pred cccccccCCC------CcccccccCchhhhhccCCccc------ccchhHHHHHHHHHhCCCC----------CCCCCCC
Q 002186 834 KYLTQLADGS------FPAKIAWTESGEFYNAMKEEMY------MDVYGFGEIILEILTNGRL----------TNAGSSL 891 (955)
Q Consensus 834 ~~~~~~~~~~------~~~~~~~~~~~e~~~~~~~~~~------~DV~S~Gvvl~Elltg~~p----------~~~~~~~ 891 (955)
++........ ...++..|.+||.........+ +|||||||++|||+||..| +......
T Consensus 189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 268 (337)
T 3mdy_A 189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS 268 (337)
T ss_dssp CEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCC
Confidence 8654332211 1235566888998876655554 8999999999999999544 3321111
Q ss_pred CCcccccccccccccccc-C-CCC--chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 892 QNKPIDGLLGEMYNENEV-G-SSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~-~-~~~--~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
.. .. ............ . .+. ...+...++.+++.+||+.||++|||++||+++|+.+...
T Consensus 269 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 269 DP-SY-EDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp SC-CH-HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CC-ch-hhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 00 00 000000000000 0 011 1135667788999999999999999999999999987543
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-38 Score=351.53 Aligned_cols=250 Identities=22% Similarity=0.226 Sum_probs=196.1
Q ss_pred hhcccchhhhccCCCCCceEEEe------CCCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCC
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV------LPTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~------~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~ 759 (955)
+.|. ..+.||+|+||.||+|. ..+|+.||||+++.... ..+.+.+|+++++++ +|||||+++++|.+.+
T Consensus 22 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 22 DRLK--LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred ccee--eceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 3455 78899999999999996 35678999999976432 345788999999999 7999999999998765
Q ss_pred -eeEEEEeecCCCChhHHhhcC----------------------------------------------------------
Q 002186 760 -QAYLLYDYLPNGNLSEKIRTK---------------------------------------------------------- 780 (955)
Q Consensus 760 -~~~lv~ey~~~gsL~~~l~~~---------------------------------------------------------- 780 (955)
..++|||||++|+|.++++..
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 489999999999999999752
Q ss_pred ----------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC----Ccc
Q 002186 781 ----------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----FPA 846 (955)
Q Consensus 781 ----------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~----~~~ 846 (955)
.++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 67788889999999999999999 9999999999999999999999999998754332211 122
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
++..|.+||+.....++.++|||||||++|||+| |+.||....... . ....... ........ .....+.++
T Consensus 257 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~-~~~~~~~---~~~~~~~~---~~~~~l~~l 328 (359)
T 3vhe_A 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-E-FCRRLKE---GTRMRAPD---YTTPEMYQT 328 (359)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-H-HHHHHHH---TCCCCCCT---TCCHHHHHH
T ss_pred CCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-H-HHHHHHc---CCCCCCCC---CCCHHHHHH
Confidence 4455889999888889999999999999999999 888886432211 0 0000000 00010011 122457788
Q ss_pred HHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 926 ALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
+..||+.||++|||++|++++|+.+.
T Consensus 329 i~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 329 MLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHccCChhhCCCHHHHHHHHHHHH
Confidence 99999999999999999999998763
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=333.98 Aligned_cols=248 Identities=23% Similarity=0.372 Sum_probs=197.9
Q ss_pred hhccCCCCCceEEEeCCCCcEEEEEEeeccc-----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 697 EEAARPQSAAGCKAVLPTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
+.||+|+||.||+|.. +|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 37 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 115 (307)
T 2nru_A 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115 (307)
T ss_dssp CEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred CccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCC
Confidence 7899999999999997 68899999986421 23567889999999999999999999999999999999999999
Q ss_pred ChhHHhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC----
Q 002186 772 NLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---- 842 (955)
Q Consensus 772 sL~~~l~~-----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~---- 842 (955)
+|.+++.. ..+|..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 116 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 192 (307)
T 2nru_A 116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMT 192 (307)
T ss_dssp BHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEEC
T ss_pred cHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCCcEEEeecccccccccccccccc
Confidence 99999863 468999999999999999999999 999999999999999999999999999875443221
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc-c-------ccccccccccccCCCCc
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-D-------GLLGEMYNENEVGSSSS 914 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~ 914 (955)
....++..|.+||...+ .++.++|||||||++|||+||+.||........... . ..+....++. . ...
T Consensus 193 ~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~ 268 (307)
T 2nru_A 193 SRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKK-M--NDA 268 (307)
T ss_dssp SSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSS-C--SCC
T ss_pred cccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccc-c--ccc
Confidence 11224556788887765 478899999999999999999999875432211000 0 0011111111 1 222
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 915 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 915 ~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
.......+.+++.+||+.||++|||++||+++|++++.
T Consensus 269 ~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 34566778899999999999999999999999998764
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=334.65 Aligned_cols=247 Identities=21% Similarity=0.223 Sum_probs=186.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc-----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|.. +|+.||||+++.... ..+.+.+|++++++++||||++++++|.+++..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCC
Confidence 778999999999999997 489999999865322 24678899999999999999999999999999999999999
Q ss_pred CCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC--------CCCceECccccccccccc
Q 002186 770 NGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--------NMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 770 ~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~--------~~~~ki~DfGl~~~~~~~ 840 (955)
+|+|.+++.. ..++.....++.|+++||+|||+....+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 90 ~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~ 169 (271)
T 3dtc_A 90 GGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169 (271)
T ss_dssp TEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------
T ss_pred CCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccc
Confidence 9999999975 5688899999999999999999983334999999999999986 678999999998765433
Q ss_pred CCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 841 DGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 841 ~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
......++..|.+||...+..++.++||||+||++|||+||+.||........ .......... .... .....
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~~---~~~~---~~~~~ 241 (271)
T 3dtc_A 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV--AYGVAMNKLA---LPIP---STCPE 241 (271)
T ss_dssp ------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHHTSCCC---CCCC---TTCCH
T ss_pred cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHhhhcCCCC---CCCC---cccCH
Confidence 33233355668899999888899999999999999999999999874321100 0000000000 0001 12234
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+.+++.+||+.||++|||++|++++|+++
T Consensus 242 ~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 242 PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 577899999999999999999999999864
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=346.90 Aligned_cols=245 Identities=15% Similarity=0.169 Sum_probs=194.2
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc------chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
+.|. ..+.||+|+||+||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..
T Consensus 24 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 24 DVYE--LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cceE--EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3466 788999999999999985 589999999996432 1356788999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC---ceECccc
Q 002186 762 YLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFG 832 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~DfG 832 (955)
|+|||||++|+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCc
Confidence 999999999999988854 267888899999999999999999 9999999999999986654 9999999
Q ss_pred ccccccccCC--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 833 FKYLTQLADG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 833 l~~~~~~~~~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
+++....... ....++.+|.+||+.....++.++||||+||++|||+||+.||..... .....+.......
T Consensus 179 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~i~~~~~~~ 251 (351)
T 3c0i_A 179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-------RLFEGIIKGKYKM 251 (351)
T ss_dssp TCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-------HHHHHHHHTCCCC
T ss_pred ceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-------HHHHHHHcCCCCC
Confidence 9876543221 122356678899999888899999999999999999999999874211 0111111111000
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...........+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 252 NPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00011122356788999999999999999999985
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-37 Score=336.88 Aligned_cols=253 Identities=13% Similarity=0.119 Sum_probs=196.6
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCC--eeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~ey~~ 769 (955)
..+.||+|+||+||+|... +|+.||||+++... ...+.+.+|++++++++|||||++++++...+ ..++||||++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 7789999999999999954 69999999997533 23567789999999999999999999998755 7899999999
Q ss_pred CCChhHHhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee----CCCCCceECccccccccccc
Q 002186 770 NGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 770 ~gsL~~~l~~~-----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl----~~~~~~ki~DfGl~~~~~~~ 840 (955)
+|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 93 ~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp TCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 99999999762 78999999999999999999999 99999999999999 78888999999999765443
Q ss_pred CCCC-cccccccCchhhhh--------ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc--ccccccccc------
Q 002186 841 DGSF-PAKIAWTESGEFYN--------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK--PIDGLLGEM------ 903 (955)
Q Consensus 841 ~~~~-~~~~~~~~~~e~~~--------~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~--~~~~~~~~~------ 903 (955)
.... ..++..|.+||+.. ...++.++|||||||++|||+||+.||......... .........
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (319)
T 4euu_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (319)
T ss_dssp CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCE
T ss_pred CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccch
Confidence 3221 22556688888875 467889999999999999999999998632221100 000000000
Q ss_pred -----------ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 904 -----------YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 904 -----------~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+.+...............+.+++.+||+.||++|||++|+++...+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred hhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 00000001112245566788999999999999999999999988653
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=346.06 Aligned_cols=248 Identities=16% Similarity=0.143 Sum_probs=188.7
Q ss_pred hcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
+|. ..+.||+|+||+||+|... +|+.||||++.......+.+.+|+..+++++|||||++++++.+++..++||||+
T Consensus 21 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 21 RYD--FVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TEE--EEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cEE--EEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 455 7889999999999999954 8999999999866555667889999999999999999999999999999999999
Q ss_pred CCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC--ceECcccccccccccCC-C
Q 002186 769 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--PHLAEFGFKYLTQLADG-S 843 (955)
Q Consensus 769 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~--~ki~DfGl~~~~~~~~~-~ 843 (955)
++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++....... .
T Consensus 99 ~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~ 175 (361)
T 3uc3_A 99 SGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 175 (361)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCC
Confidence 99999999864 578899999999999999999998 9999999999999987765 99999999874332221 1
Q ss_pred CcccccccCchhhhhccCCccc-ccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMY-MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~-~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...++.+|.+||+.....+..+ +||||+||++|||+||+.||......... ......+.... .. .+........+
T Consensus 176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~--~~~~~~~~~~~-~~-~~~~~~~s~~~ 251 (361)
T 3uc3_A 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY--RKTIQRILSVK-YS-IPDDIRISPEC 251 (361)
T ss_dssp -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH--HHHHHHHHTTC-CC-CCTTSCCCHHH
T ss_pred CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH--HHHHHHHhcCC-CC-CCCcCCCCHHH
Confidence 2235667889998877776555 89999999999999999999754322111 11111111111 00 00001122457
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+++.+||+.||++|||++|++++
T Consensus 252 ~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 252 CHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHccCChhHCcCHHHHHhC
Confidence 789999999999999999999864
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-37 Score=338.94 Aligned_cols=237 Identities=16% Similarity=0.130 Sum_probs=190.6
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..++||||+
T Consensus 13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 778999999999999994 689999999997532 12456889999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-CCcc
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 846 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-~~~~ 846 (955)
+|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 92 ~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~ 168 (336)
T 3h4j_B 92 GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC 168 (336)
T ss_dssp CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCT
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCccccccc
Confidence 7899998864 578899999999999999999999 999999999999999999999999999876543322 2223
Q ss_pred cccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
+++.|.+||...+..+ +.++||||+||++|||+||+.||........ ...+.... ...+. .....+.++
T Consensus 169 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~------~~~i~~~~-~~~p~---~~s~~~~~l 238 (336)
T 3h4j_B 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL------FKKVNSCV-YVMPD---FLSPGAQSL 238 (336)
T ss_dssp TSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC------BCCCCSSC-CCCCT---TSCHHHHHH
T ss_pred CCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH------HHHHHcCC-CCCcc---cCCHHHHHH
Confidence 5667889998877665 6889999999999999999999974322110 11111100 00111 122456788
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 002186 926 ALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+.+||+.||++|||++|+++
T Consensus 239 i~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 239 IRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp HHTTSCSSGGGSCCHHHHTT
T ss_pred HHHHcCCChhHCcCHHHHHh
Confidence 99999999999999999986
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=359.79 Aligned_cols=244 Identities=17% Similarity=0.212 Sum_probs=194.0
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|...++..||||+++......+.+.+|+++|++++|||||+++|+|.+ +..++|||||++|+|.
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 677899999999999998888889999998765566789999999999999999999999976 6789999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---ccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 847 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~~~ 847 (955)
++++. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......... ...
T Consensus 267 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~ 343 (452)
T 1fmk_A 267 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343 (452)
T ss_dssp HHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------------C
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcc
Confidence 99974 378999999999999999999999 99999999999999999999999999997654321111 112
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||......++.++|||||||++|||+| |+.|+...... .....+........+ ......+.+++
T Consensus 344 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~------~~~~~i~~~~~~~~~---~~~~~~l~~li 414 (452)
T 1fmk_A 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------EVLDQVERGYRMPCP---PECPESLHDLM 414 (452)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHHHHHHTTCCCCCC---TTSCHHHHHHH
T ss_pred cccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCCCCC---CCCCHHHHHHH
Confidence 334778898888889999999999999999999 78887632211 011111111001111 12234577899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhccC
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+||+.||++|||++|+++.|+.+.
T Consensus 415 ~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 415 CQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred HHHccCChhhCcCHHHHHHHHHHHh
Confidence 9999999999999999999998764
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=345.36 Aligned_cols=247 Identities=17% Similarity=0.141 Sum_probs=183.9
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
+.|. ..+.||+|+||.||+|+.. +|+.||||+++... ..+.+.+|++++++++|||||+++++|.+.+..++||||
T Consensus 53 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 53 DFFE--VESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GTEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CcEE--EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 4466 7789999999999999964 68899999997543 345678899999999999999999999999999999999
Q ss_pred cCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---CCCceECcccccccccccCC
Q 002186 768 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 768 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DfGl~~~~~~~~~ 842 (955)
+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 130 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 206 (349)
T 2w4o_A 130 VTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL 206 (349)
T ss_dssp CCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence 999999999976 457888999999999999999999 9999999999999975 88999999999876543221
Q ss_pred -CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 843 -SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 843 -~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
....++..|.+||+..+..++.++|||||||++|||+||+.||........ ....+.........+........
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~ 281 (349)
T 2w4o_A 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF-----MFRRILNCEYYFISPWWDEVSLN 281 (349)
T ss_dssp ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH-----HHHHHHTTCCCCCTTTTTTSCHH
T ss_pred cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH-----HHHHHHhCCCccCCchhhhCCHH
Confidence 122355668899999888899999999999999999999999874332110 01111111100001111223356
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.+++.+||+.||++|||+.|+++.
T Consensus 282 ~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 282 AKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 7789999999999999999999874
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-36 Score=347.38 Aligned_cols=341 Identities=25% Similarity=0.366 Sum_probs=224.4
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+.+++.|+++++.+.. +| .+..+++|++|||++|.+++..| +..+++|++|++++|.+++..| +.++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 4567777777777764 44 36777788888888887775543 7777788888888777775443 77777888888
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++..+ +.++++|++|++++|.+++ +| .++.+++|++|+++ |.+.+.. .+.++++|++|++++|.+++
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCC
Confidence 88777775433 7777788888887777765 33 47777777777775 3333322 26777777777777777764
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
. ..+..+++|++|++++|.+.+..| +..+++|++|++++|++++. ..+..+++|+.|++++|.+++..| +..
T Consensus 192 ~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~ 263 (466)
T 1o6v_A 192 I--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSG 263 (466)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT
T ss_pred C--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhc
Confidence 3 346677777777777777776544 56677777777777777653 356677777777777777776544 667
Q ss_pred CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+++|+.|++++|.+++..| +..+++|+.|++++|.+.+..| +..+.+|+.|++++|++++..| +..+++|+.|+
T Consensus 264 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 337 (466)
T 1o6v_A 264 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLF 337 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEE
T ss_pred CCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeE
Confidence 7777777777777765443 6667777777777777764322 4444555555555555555443 44555666666
Q ss_pred CcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCC
Q 002186 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNN 471 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N 471 (955)
+++|++++. ..+..+++|++|++++|++++..| +..+++|+.|++++|
T Consensus 338 l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 385 (466)
T 1o6v_A 338 FYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 385 (466)
T ss_dssp CCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCE
T ss_pred CCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCC
Confidence 666655543 245555566666666666555544 455555555555555
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=340.82 Aligned_cols=243 Identities=16% Similarity=0.213 Sum_probs=190.4
Q ss_pred hhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 759 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 759 (955)
.+.|. ..+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|++++++++|||||+++++|.+.+
T Consensus 5 ~~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 5 LTDFE--PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHEE--EEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhcCc--eeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 45566 7889999999999999965 89999999997533 34567899999999999999999999986543
Q ss_pred ----------------------------------------------------eeEEEEeecCCCChhHHhhcC-----CC
Q 002186 760 ----------------------------------------------------QAYLLYDYLPNGNLSEKIRTK-----RD 782 (955)
Q Consensus 760 ----------------------------------------------------~~~lv~ey~~~gsL~~~l~~~-----~~ 782 (955)
..++|||||++|+|.+++... ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 379999999999999999763 35
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--------------CCcccc
Q 002186 783 WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--------------SFPAKI 848 (955)
Q Consensus 783 ~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--------------~~~~~~ 848 (955)
+.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....++
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 667889999999999999999 999999999999999999999999999876543211 112255
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..|.+||...+..++.++||||+||++|||+||..|+.... ......... ..+.........+.+++.+
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~--------~~~~~~~~~---~~~~~~~~~~~~~~~li~~ 308 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV--------RIITDVRNL---KFPLLFTQKYPQEHMMVQD 308 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH--------HHHHHHHTT---CCCHHHHHHCHHHHHHHHH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH--------HHHHHhhcc---CCCcccccCChhHHHHHHH
Confidence 66889999988889999999999999999999866532100 000111111 1111223444567889999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 002186 929 CTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~ 946 (955)
||+.||++|||++|++++
T Consensus 309 ~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 309 MLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHCSSGGGSCCHHHHHHS
T ss_pred HccCCCCcCCCHHHHhhc
Confidence 999999999999999873
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=331.58 Aligned_cols=246 Identities=20% Similarity=0.258 Sum_probs=199.0
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|...+++.||||+++......+.+.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 77889999999999999888999999999876666678899999999999999999999999999999999999999999
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---CCCcccc
Q 002186 775 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAKI 848 (955)
Q Consensus 775 ~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~---~~~~~~~ 848 (955)
+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... .....+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 168 (267)
T 3t9t_A 92 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 168 (267)
T ss_dssp HHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCC
T ss_pred HHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccccccccc
Confidence 99975 368889999999999999999999 99999999999999999999999999987543211 1111233
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
..|.+||......++.++||||+||++|||+| |+.|+...... .....+........+. .....+.+++.
T Consensus 169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~i~~~~~~~~~~---~~~~~l~~li~ 239 (267)
T 3t9t_A 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDISTGFRLYKPR---LASTHVYQIMN 239 (267)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTTCCCCCCT---TSCHHHHHHHH
T ss_pred ccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH------HHHHHHhcCCcCCCCc---cCcHHHHHHHH
Confidence 45788899888889999999999999999999 77777532211 0111111110000011 12345778899
Q ss_pred HccCCCCCCCCCHHHHHHHhhccCC
Q 002186 928 LCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
+||+.||++|||++|++++|+++..
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 240 HCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999998754
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=343.58 Aligned_cols=244 Identities=17% Similarity=0.229 Sum_probs=187.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcE----EEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGIT----VSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~----vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||.||+|+. .+|+. ||+|.++... ...+.+.+|++++++++|||||+++++|.+.+ .++||||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~ 97 (327)
T 3poz_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEEC
T ss_pred cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEe
Confidence 788999999999999984 45554 5888875432 34567889999999999999999999998754 7899999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 174 (327)
T 3poz_A 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174 (327)
T ss_dssp CTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC--
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCCcccc
Confidence 999999999975 468899999999999999999999 99999999999999999999999999997654332211
Q ss_pred ----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 845 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 845 ----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
..++..|.+||...+..++.++|||||||++|||+| |+.||....... .......... .+......
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------~~~~~~~~~~--~~~~~~~~ 245 (327)
T 3poz_A 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGER--LPQPPICT 245 (327)
T ss_dssp -----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-------HHHHHHTTCC--CCCCTTBC
T ss_pred cccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-------HHHHHHcCCC--CCCCccCC
Confidence 112345788999988899999999999999999999 888886432111 0111111000 00111223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
..+.+++.+||+.||++|||++|++++|+.+.
T Consensus 246 ~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp HHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 45778999999999999999999999997653
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=347.94 Aligned_cols=251 Identities=18% Similarity=0.190 Sum_probs=198.6
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeE
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 762 (955)
.++.+.|. ..+.||+|+||.||+|+. .+|+.||+|++.... .....+.+|++++++++|||||++++++.+.+..+
T Consensus 47 ~~~~~~y~--i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 124 (387)
T 1kob_A 47 GSVYDYYD--ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMV 124 (387)
T ss_dssp SCGGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEE
T ss_pred CccccceE--EEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEE
Confidence 34445666 888999999999999985 579999999997543 24557889999999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC--CCCceECcccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLT 837 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~--~~~~ki~DfGl~~~~ 837 (955)
+||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 125 lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 99999999999999975 468889999999999999999999 9999999999999974 477999999998765
Q ss_pred cccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 838 QLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 838 ~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
...... ...++..|.+||+.....++.++||||+||++|||+||+.||....... ....+.............
T Consensus 202 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 275 (387)
T 1kob_A 202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE------TLQNVKRCDWEFDEDAFS 275 (387)
T ss_dssp CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHHCCCCCCSSTTT
T ss_pred CCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCCCCccccc
Confidence 432221 1235666889999988889999999999999999999999987432110 011111100000011112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....++.+++.+||+.||++|||++|++++
T Consensus 276 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 276 SVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 233567789999999999999999999874
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=347.41 Aligned_cols=247 Identities=21% Similarity=0.249 Sum_probs=195.9
Q ss_pred hcccchhhhccCCCCCceEEEeC--------CCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNR 758 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~--------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 758 (955)
+|. ..+.||+|+||.||+|+. .++..||||+++.... ..+.+.+|+++++++ +|||||+++++|.++
T Consensus 70 ~y~--i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 70 RLV--LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GEE--EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred heE--eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 355 778899999999999984 2456899999976432 346788999999999 899999999999999
Q ss_pred CeeEEEEeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 759 HQAYLLYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
+..++||||+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 999999999999999999965 268899999999999999999999 99999999999999
Q ss_pred CCCCCceECcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
+.++.+||+|||+++....... ....++..|.+||+..+..++.++|||||||++|||+| |+.|+..... .
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-~--- 300 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-E--- 300 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-H---
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-H---
Confidence 9999999999999876543221 11123445788999888889999999999999999999 8888763321 0
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.....+.......... ....++.+++.+||+.||++|||++||++.|+++
T Consensus 301 --~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 301 --ELFKLLKEGHRMDKPS---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp --HHHHHHHTTCCCCCCS---SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHHHHcCCCCCCCc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0111111110010011 1234577889999999999999999999999865
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=341.69 Aligned_cols=246 Identities=16% Similarity=0.182 Sum_probs=193.0
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
+.|. ..+.||+|+||+||+|+. .+|+.||||++..... ..+.+.+|+.++++++|||||++++++.+++..++||
T Consensus 7 ~~y~--i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 7 EDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TCEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhce--eeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 3455 788999999999999985 4899999999965332 2456789999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999999976 468899999999999999999998 999999999999999999999999999875432211
Q ss_pred ---CCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 843 ---SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 843 ---~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
....++..|.+||+.....+ +.++||||+||++|||+||+.||.......... ....... . ........
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-----~~~~~~~-~-~~~~~~~~ 234 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-----SDWKEKK-T-YLNPWKKI 234 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH-----HHHHTTC-T-TSTTGGGS
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH-----HHHhccc-c-cCCccccC
Confidence 12235566888998877664 778999999999999999999997433221100 0000000 0 00111223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 235 DSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 3456789999999999999999999864
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=343.26 Aligned_cols=258 Identities=20% Similarity=0.250 Sum_probs=191.7
Q ss_pred hcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEc-----CCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-----RHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-----~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|+. +|+.||||+++..........+|+..+..++||||+++++++.. ....++|
T Consensus 14 ~y~--~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 14 NLK--LLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp SEE--EEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred Hhh--eeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 355 788999999999999976 78999999997544333333445555667899999999986643 2367899
Q ss_pred EeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCC------CCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 765 YDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC------YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~------~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
|||+++|+|.+++.. ..++.....++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||+++..
T Consensus 91 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~ 170 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL 170 (336)
T ss_dssp ECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeec
Confidence 999999999999975 4588899999999999999999873 348999999999999999999999999998754
Q ss_pred cccCC----------CCcccccccCchhhhhc-------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccc-
Q 002186 838 QLADG----------SFPAKIAWTESGEFYNA-------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGL- 899 (955)
Q Consensus 838 ~~~~~----------~~~~~~~~~~~~e~~~~-------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~- 899 (955)
..... ....++..|.+||...+ ..++.++|||||||++|||+||+.|+..+...........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~ 250 (336)
T 3g2f_A 171 TGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQT 250 (336)
T ss_dssp SSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHH
T ss_pred ccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhc
Confidence 32110 11224566888898765 4566789999999999999999888775443222111100
Q ss_pred ----------cc-----ccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 900 ----------LG-----EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 900 ----------~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.. ....+...............+.+++.+||+.||++|||++|+++.|+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 251 EVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp HHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 00 0000000000111223556788999999999999999999999999865
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-37 Score=341.84 Aligned_cols=250 Identities=20% Similarity=0.237 Sum_probs=198.3
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.|. ..+.||+|+||.||+|+. .+++.||||+++.... ..+.+.+|++++++++|||||+++++|.+.+..
T Consensus 48 ~~~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 48 NIE--YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GCE--EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HCe--eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 355 778899999999999986 3468999999975432 356788999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--------------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCC
Q 002186 762 YLLYDYLPNGNLSEKIRT--------------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKA 815 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--------------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~ 815 (955)
++||||+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCc
Confidence 999999999999999964 357888899999999999999999 999999999
Q ss_pred CCeeeCCCCCceECcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCC
Q 002186 816 SNIVFDENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSS 890 (955)
Q Consensus 816 ~NiLl~~~~~~ki~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~ 890 (955)
+||+++.++.+||+|||+++....... ....++..|.+||......++.++|||||||++|||+| |+.||.....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 999999999999999999875432211 11223445788998888889999999999999999999 8888864321
Q ss_pred CCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 891 LQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
. .....+.+........ .....+.+++.+||+.||++|||++|+++.|+++...
T Consensus 283 ~------~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 283 E------EVIYYVRDGNILACPE---NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp H------HHHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred H------HHHHHHhCCCcCCCCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 1 1111111111011111 2234577899999999999999999999999988654
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=344.43 Aligned_cols=358 Identities=22% Similarity=0.307 Sum_probs=288.9
Q ss_pred CCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCccc
Q 002186 109 SHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP 188 (955)
Q Consensus 109 s~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~ 188 (955)
..+.+.+.++. ..+++|++|++++|.+.. +| .+..+++|++|||++|.+++..| +.++++|++|+|++|.+++.
T Consensus 32 ~~~~~~~~i~~--~~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 105 (466)
T 1o6v_A 32 GKTNVTDTVSQ--TDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI 105 (466)
T ss_dssp TCSSTTSEECH--HHHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC
T ss_pred cccccccccCh--hHhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccC
Confidence 33444444432 457899999999999985 55 48899999999999999997544 99999999999999999976
Q ss_pred CCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCC
Q 002186 189 IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNL 268 (955)
Q Consensus 189 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l 268 (955)
.| ++++++|++|++++|.+++..+ +..+++|++|++++|.+.+ ++ .++++++|++|+++ |.+.+.. .+.++
T Consensus 106 ~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l 176 (466)
T 1o6v_A 106 TP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANL 176 (466)
T ss_dssp GG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTC
T ss_pred hh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccC
Confidence 55 9999999999999999987543 8999999999999999886 34 48899999999997 5555433 38899
Q ss_pred CCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEc
Q 002186 269 TKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFI 348 (955)
Q Consensus 269 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 348 (955)
++|++|++++|.+++. ..+..+++|++|++++|.+++..| ++.+++|+.|++++|++++. ..+..+++|+.|++
T Consensus 177 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l 250 (466)
T 1o6v_A 177 TTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDL 250 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEEC
Confidence 9999999999998864 357889999999999999997655 78899999999999999864 46788999999999
Q ss_pred cCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccc
Q 002186 349 WNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGE 428 (955)
Q Consensus 349 ~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 428 (955)
++|.+++..| +..+++|+.|++++|.+++..| +..+..|+.|++++|.+.+..+ +..+++|+.|++++|++++.
T Consensus 251 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~ 324 (466)
T 1o6v_A 251 ANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDI 324 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCC
T ss_pred CCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCc
Confidence 9999987655 7888999999999999886433 6667778888888888876544 67778888888888888776
Q ss_pred cchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCC
Q 002186 429 IPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITG 500 (955)
Q Consensus 429 ~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~ 500 (955)
.| +..+++|+.|++++|++++. ..+..+++|++|++++| .+.+..| +..+++|+.|++++|.+++
T Consensus 325 ~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n-~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 325 SP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHN-QISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSS-CCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred hh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCC-ccCccch--hhcCCCCCEEeccCCcccC
Confidence 65 66778888888888887764 35677777888888877 5555555 5667777777777777665
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=341.59 Aligned_cols=246 Identities=16% Similarity=0.183 Sum_probs=177.8
Q ss_pred hhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 696 CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
.+.||+|+||.||+|.. .+|+.||||++... ....+.+|++++.+++ |||||++++++.+++..|+||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 46799999999999995 57999999999743 3456778999999997 99999999999999999999999999999
Q ss_pred hHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC---CceECcccccccccccCCC--Ccc
Q 002186 774 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EPHLAEFGFKYLTQLADGS--FPA 846 (955)
Q Consensus 774 ~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~---~~ki~DfGl~~~~~~~~~~--~~~ 846 (955)
.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++........ ...
T Consensus 94 ~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 170 (325)
T 3kn6_A 94 FERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170 (325)
T ss_dssp HHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence 999976 468889999999999999999999 999999999999997665 7999999998754332221 222
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc-cccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK-PIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
++..|.+||+.....++.++||||+||++|||+||+.||......... ........+.........+.+.....++.++
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 250 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHH
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHH
Confidence 456688999998888999999999999999999999999743321110 0111111111111111111122345678899
Q ss_pred HHHccCCCCCCCCCHHHHHHH
Q 002186 926 ALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.+||+.||++|||++|++++
T Consensus 251 i~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 251 IQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHHCCCTTTCCCTTTSTTC
T ss_pred HHHHCCCChhHCCCHHHHhcC
Confidence 999999999999999998753
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-37 Score=344.03 Aligned_cols=247 Identities=15% Similarity=0.137 Sum_probs=192.2
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|..++.++ +|||||++++++.+++..|+
T Consensus 53 ~y~--~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 53 DFD--LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred HcE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 355 788999999999999985 5788999999976432 233567888888876 89999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
|||||++|+|.+++.+ ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 207 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 207 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccCC
Confidence 9999999999999975 578889999999999999999999 99999999999999999999999999987532211
Q ss_pred --CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC--c-cccccccccccccccCCCCchH
Q 002186 842 --GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN--K-PIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 842 --~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
.....+++.|.+||+..+..++.++||||+||++|||+||+.||........ . ........+.... ...+.
T Consensus 208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~--- 283 (396)
T 4dc2_A 208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPR--- 283 (396)
T ss_dssp CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-CCCCT---
T ss_pred CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-cCCCC---
Confidence 1223366778999999988999999999999999999999999963221110 0 0001111111111 11111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSM------EEALK 945 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~------~ev~~ 945 (955)
....++.+++.+||+.||++||++ +|+++
T Consensus 284 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 123457788999999999999985 66665
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=329.73 Aligned_cols=246 Identities=21% Similarity=0.272 Sum_probs=190.2
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccch--------HHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR--------IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~--------~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
|. ..+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++||||+++++++.+..
T Consensus 21 y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 21 IE--YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp EE--EEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ce--ehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 55 778899999999999985 58999999998643211 167889999999999999999999997654
Q ss_pred EEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCC--cccCCCCCCCeeeCCCCC-----ceECcc
Q 002186 762 YLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENME-----PHLAEF 831 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~--iiHrdlk~~NiLl~~~~~-----~ki~Df 831 (955)
++||||+++|+|.+.+.. ..++..+..++.|+++||+|||+. + |+||||||+||+++.++. +||+||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 799999999999998854 468999999999999999999998 6 999999999999987776 999999
Q ss_pred cccccccccCCCCcccccccCchhhh--hccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 832 GFKYLTQLADGSFPAKIAWTESGEFY--NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 832 Gl~~~~~~~~~~~~~~~~~~~~~e~~--~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
|+++....... ...++..|.+||.. ....++.++||||+||++|||+||+.||....................+
T Consensus 174 g~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--- 249 (287)
T 4f0f_A 174 GLSQQSVHSVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP--- 249 (287)
T ss_dssp TTCBCCSSCEE-CCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCC---
T ss_pred Ccccccccccc-ccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCC---
Confidence 99875432211 12245567888987 3445788999999999999999999998743321100000000001111
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.........+.+++.+||+.||++|||++|+++.|+++
T Consensus 250 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 250 ---TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ---CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11112235677899999999999999999999999864
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=338.53 Aligned_cols=249 Identities=19% Similarity=0.233 Sum_probs=197.0
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+.+..
T Consensus 24 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 24 NLV--LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GEE--EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hee--eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 355 778899999999999974 456899999997543 2356788999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhcC--------------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCC
Q 002186 762 YLLYDYLPNGNLSEKIRTK--------------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKA 815 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~~--------------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~ 815 (955)
++||||+++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 9999999999999999752 56788899999999999999999 999999999
Q ss_pred CCeeeCCCCCceECcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCC
Q 002186 816 SNIVFDENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSS 890 (955)
Q Consensus 816 ~NiLl~~~~~~ki~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~ 890 (955)
+||+++.++.+||+|||+++....... ....+...|.+||...+..++.++||||+||++|||+| |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999875533221 11123345788898888888999999999999999999 8888764321
Q ss_pred CCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 891 LQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
.. ....+......... ......+.+++.+||+.||++|||++|+++.|+++..
T Consensus 259 ~~------~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 ER------LFNLLKTGHRMERP---DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp GG------HHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH------HHHHhhcCCcCCCC---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11 01111110001001 1223457789999999999999999999999987643
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=331.57 Aligned_cols=256 Identities=19% Similarity=0.268 Sum_probs=183.5
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 6 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 6 QFK--QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred cee--EeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 355 788999999999999985 4799999999975432 34677889999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 767 YLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 767 y~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
|++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 699998864 367888899999999999999999 99999999999999999999999999987654
Q ss_pred ccCC--CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Cccccccc
Q 002186 839 LADG--SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLL 900 (955)
Q Consensus 839 ~~~~--~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~ 900 (955)
.... ....++..|.+||...+ ..++.++||||+||++|||+||+.||....... .|......
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (317)
T 2pmi_A 160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL 239 (317)
T ss_dssp SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence 3221 12234566888998765 468899999999999999999999987432110 00000000
Q ss_pred ccccccccc-CCCCchH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhccCC
Q 002186 901 GEMYNENEV-GSSSSLQ---------DEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLKP 952 (955)
Q Consensus 901 ~~~~~~~~~-~~~~~~~---------~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~~~ 952 (955)
.. +.+... ....... .....+.+++.+||+.||++|||++|+++. +++...
T Consensus 240 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 240 PK-YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp TT-CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred hh-cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 00 000000 0000000 123467899999999999999999999864 444433
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=341.93 Aligned_cols=251 Identities=10% Similarity=0.021 Sum_probs=196.1
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||.+..... .+.+.+|+++++++ +||||+++++++...+..++||||
T Consensus 10 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 10 NFR--VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TEE--EEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CeE--EEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 355 788999999999999994 6899999999875432 33577899999999 999999999999999999999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC-----ceECcccccccccc
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-----PHLAEFGFKYLTQL 839 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~-----~ki~DfGl~~~~~~ 839 (955)
+ +|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++....
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 87 L-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 9 9999999973 578999999999999999999999 9999999999999998887 99999999976433
Q ss_pred cCC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 840 ADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 840 ~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
... ....++..|.+||+..+..++.++|||||||++|||+||+.||........ ......+.......
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~---~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL---KERYQKIGDTKRAT 239 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH---HHHHHHHHHHHHHS
T ss_pred CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH---HHHHHHHHhhhccC
Confidence 221 122355668899999888899999999999999999999999975332111 11111111100000
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
......+...++.+++..||+.||.+||++++|.+.|+++
T Consensus 240 ~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 240 PIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp CHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred CHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 0000000012688899999999999999999999988754
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=340.01 Aligned_cols=244 Identities=16% Similarity=0.183 Sum_probs=193.4
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||+++++|.+.+..|+|
T Consensus 16 ~y~--i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 16 HFE--ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GEE--EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HeE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 465 788999999999999984 578999999997532 2356778999999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 94 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp ECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 999999999999976 467888899999999999999999 999999999999999999999999999976543322
Q ss_pred -CCcccccccCchhhhhc---cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 843 -SFPAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 843 -~~~~~~~~~~~~e~~~~---~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
....+++.|.+||+... ..++.++||||+||++|||+||+.||........ ......+.... ...+. ..
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~---~~~~~~~~~~~-~~~p~---~~ 243 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS---KEIVHTFETTV-VTYPS---AW 243 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH---HHHHHHHHHCC-CCCCT---TS
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH---HHHHHHHhhcc-cCCCC---cC
Confidence 12235667889998864 3578899999999999999999999974332111 11111111111 11111 12
Q ss_pred HHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPS-MEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt-~~ev~~ 945 (955)
...+.+++.+||+.||++||+ ++++.+
T Consensus 244 s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 244 SQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 345778899999999999998 777764
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=343.50 Aligned_cols=241 Identities=17% Similarity=0.150 Sum_probs=191.7
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++++++ +|||||++++++.+++..|+
T Consensus 24 ~y~--~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 24 NFE--FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp CEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred heE--EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 455 788999999999999985 579999999997532 2345677889999887 69999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
|||||++|+|.+++.+ ..++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 9999999999999975 568888999999999999999999 99999999999999999999999999987532221
Q ss_pred --CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 --GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 --~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
.....+++.|.+||+.....++.++||||+||++|||+||+.||...... .....+.... ...+. ...
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~~ 248 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED------DLFEAILNDE-VVYPT---WLH 248 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSC
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH------HHHHHHHcCC-CCCCC---CCC
Confidence 11223567789999998888999999999999999999999999743211 1111121111 11111 122
Q ss_pred HHHHHHHHHccCCCCCCCCCH------HHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSM------EEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~------~ev~~ 945 (955)
..+.+++.+|++.||++||++ +|+++
T Consensus 249 ~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 249 EDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred HHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 456788899999999999998 77765
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-37 Score=334.43 Aligned_cols=245 Identities=23% Similarity=0.295 Sum_probs=187.1
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|.. .|+.||||++... ...+.+.+|++.+++++|||||+++|++.+ ..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 12 VEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEEECCSSSEEEEEEE-TTEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCBHH
T ss_pred eeeEeecCCCceEEEEEE-CCeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCCHH
Confidence 778899999999999987 4789999998643 345678899999999999999999998864 489999999999999
Q ss_pred HHhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC-ceECcccccccccccCCCCcccc
Q 002186 775 EKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-PHLAEFGFKYLTQLADGSFPAKI 848 (955)
Q Consensus 775 ~~l~~~-----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~-~ki~DfGl~~~~~~~~~~~~~~~ 848 (955)
++++.. .++.....++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++........ ...++
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~-~~~gt 166 (307)
T 2eva_A 88 NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT-NNKGS 166 (307)
T ss_dssp HHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------CC
T ss_pred HHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccc-cCCCC
Confidence 999753 467888999999999999999943339999999999999998876 79999999865433221 12245
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..|.+||...+..++.++|||||||++|||+||+.||........ ............ +........+.+++.+
T Consensus 167 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~l~~li~~ 239 (307)
T 2eva_A 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF----RIMWAVHNGTRP---PLIKNLPKPIESLMTR 239 (307)
T ss_dssp TTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH----HHHHHHHTTCCC---CCBTTCCHHHHHHHHH
T ss_pred CceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH----HHHHHHhcCCCC---CcccccCHHHHHHHHH
Confidence 568899999888899999999999999999999999864321110 000000000000 1111223457789999
Q ss_pred ccCCCCCCCCCHHHHHHHhhccC
Q 002186 929 CTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
||+.||++|||++|++++|+.+.
T Consensus 240 ~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 240 CWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHG
T ss_pred HhcCChhhCcCHHHHHHHHHHHH
Confidence 99999999999999999988653
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-37 Score=329.32 Aligned_cols=247 Identities=20% Similarity=0.275 Sum_probs=193.6
Q ss_pred cccchhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 765 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 765 (955)
|. ..+.||+|+||.||+|+. +|+.||||+++... ...+.+.+|++++++++|||||+++++|.++ +..++||
T Consensus 12 y~--~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 12 LN--FLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp CE--EEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred hH--HHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 55 778999999999999997 48899999997543 2356788999999999999999999999887 7889999
Q ss_pred eecCCCChhHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 766 DYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 766 ey~~~gsL~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||+++|+|.++++.. .++.++..++.|+++||+|||+. .++|+||||||+||+++.++.+||+|||++......
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~- 166 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP- 166 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT-
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeeccc-
Confidence 999999999999863 58999999999999999999987 123999999999999999999999999887543221
Q ss_pred CCCcccccccCchhhhhccCCc---ccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 842 GSFPAKIAWTESGEFYNAMKEE---MYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~~~~~~---~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
...++..|.+||.......+ .++|||||||++|||+||+.||....... ...........+. . . ...
T Consensus 167 --~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~-~--~---~~~ 236 (271)
T 3kmu_A 167 --GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME--IGMKVALEGLRPT-I--P---PGI 236 (271)
T ss_dssp --TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH--HHHHHHHSCCCCC-C--C---TTC
T ss_pred --CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH--HHHHHHhcCCCCC-C--C---CCC
Confidence 12244568888988765443 47999999999999999999986432110 0000000111111 0 1 122
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
...+.+++..||+.||++|||++|+++.|+.++.
T Consensus 237 ~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 237 SPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 3457788899999999999999999999998865
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=334.21 Aligned_cols=247 Identities=19% Similarity=0.250 Sum_probs=188.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++|||||++++++.+++..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 7788999999999999998899999999965332 246778999999999999999999999999999999999985
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcc
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPA 846 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~ 846 (955)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 161 (288)
T 1ob3_A 85 DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI 161 (288)
T ss_dssp EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccccccccc
Confidence 99998864 467888899999999999999999 999999999999999999999999999876432211 1122
Q ss_pred cccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Cccccccccccccccc--
Q 002186 847 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLLGEMYNENE-- 908 (955)
Q Consensus 847 ~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~-- 908 (955)
++..|.+||...+ ..++.++||||+||++|||+||+.||....... .|........ +++..
T Consensus 162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 240 (288)
T 1ob3_A 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK-YDPNFTV 240 (288)
T ss_dssp CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT-CCTTCCC
T ss_pred ccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccc-ccccccc
Confidence 4556888898765 458899999999999999999999986432110 0000000000 00000
Q ss_pred ---cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 909 ---VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 909 ---~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.............+.+++.+||+.||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000001223567789999999999999999999863
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-37 Score=333.69 Aligned_cols=243 Identities=15% Similarity=0.157 Sum_probs=186.0
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---------------------------hHHHHHHHHHHHh
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------------------------RIKIVSEFITRIG 741 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---------------------------~~~~~~~e~~~l~ 741 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+++++
T Consensus 14 ~y~--~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 14 QYT--LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp TEE--EEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ceE--EEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 455 778999999999999984 5799999999965321 1245788999999
Q ss_pred ccCCCCceeEeEEEEc--CCeeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCe
Q 002186 742 TVRHKNLIRLLGFCYN--RHQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 818 (955)
Q Consensus 742 ~l~H~niv~l~g~~~~--~~~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~Ni 818 (955)
+++|||||++++++.+ .+..++||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNL 168 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHE
Confidence 9999999999999987 5689999999999999987754 578999999999999999999999 999999999999
Q ss_pred eeCCCCCceECcccccccccccCC--CCcccccccCchhhhhccC---CcccccchhHHHHHHHHHhCCCCCCCCCCCCC
Q 002186 819 VFDENMEPHLAEFGFKYLTQLADG--SFPAKIAWTESGEFYNAMK---EEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 893 (955)
Q Consensus 819 Ll~~~~~~ki~DfGl~~~~~~~~~--~~~~~~~~~~~~e~~~~~~---~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~ 893 (955)
+++.++.+||+|||+++....... ....++..|.+||...... .+.++|||||||++|||+||+.||.......
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~- 247 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC- 247 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-
T ss_pred EECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH-
Confidence 999999999999999876543221 1123556688889876544 3678999999999999999999986432110
Q ss_pred ccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 894 KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....+.... .. .+........+.+++.+||+.||++|||++|+++
T Consensus 248 -----~~~~~~~~~-~~-~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 248 -----LHSKIKSQA-LE-FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp -----HHHHHHHCC-CC-CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -----HHHHHhccc-CC-CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 000110000 00 0001112345778899999999999999999975
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=334.57 Aligned_cols=240 Identities=18% Similarity=0.169 Sum_probs=195.0
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+.++++++|||||++++++.+.+..|+|
T Consensus 7 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 7 DFQ--ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred HcE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 355 788999999999999985 589999999997532 2356678899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 999999999999975 467888899999999999999998 999999999999999999999999999976543222
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...+++.|.+||...+..++.++||||+||++|||+||+.||...... .....+.... ...++. ...++
T Consensus 162 -~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~i~~~~-~~~p~~---~~~~~ 230 (318)
T 1fot_A 162 -TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM------KTYEKILNAE-LRFPPF---FNEDV 230 (318)
T ss_dssp -CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHCC-CCCCTT---SCHHH
T ss_pred -cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCC-CCCCCC---CCHHH
Confidence 223566688999998888999999999999999999999998743211 1111111111 111111 22456
Q ss_pred HHHHHHccCCCCCCCC-----CHHHHHH
Q 002186 923 LDVALLCTRSTPSDRP-----SMEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RP-----t~~ev~~ 945 (955)
.+++.+|++.||++|| +++|+++
T Consensus 231 ~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 231 KDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 7888999999999999 8898875
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=341.12 Aligned_cols=241 Identities=18% Similarity=0.171 Sum_probs=192.7
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 762 (955)
+.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+..|.+++.++ +|||||++++++.+.+..|
T Consensus 17 ~~y~--~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 17 EDFI--LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp TTEE--EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred HHeE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 3465 788999999999999995 579999999997542 2345667788888876 8999999999999999999
Q ss_pred EEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
+||||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 95 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 99999999999999975 678899999999999999999999 9999999999999999999999999998754322
Q ss_pred C--CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 841 D--GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 841 ~--~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
. .....+++.|.+||+..+..++.++||||+||++|||+||+.||...... .....+.... ...+. ..
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~ 241 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE------ELFHSIRMDN-PFYPR---WL 241 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TS
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH------HHHHHHHhCC-CCCCc---cc
Confidence 1 12223567789999998888999999999999999999999998743211 1111111111 10111 12
Q ss_pred HHHHHHHHHHccCCCCCCCCCHH-HHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSME-EAL 944 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~-ev~ 944 (955)
...+.+++.+||+.||++||++. |+.
T Consensus 242 s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 242 EKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 34577889999999999999997 664
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-37 Score=336.01 Aligned_cols=240 Identities=18% Similarity=0.140 Sum_probs=185.1
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc---hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT---RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
+.|. ..+.||+|+||+||+|+.. +|+.||||++..... .......|+..+.++ +|||||+++++|.+.+..++
T Consensus 57 ~~y~--~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 57 QSFQ--RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHEE--EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhee--eeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 4566 8889999999999999965 899999999865322 233344455555544 89999999999999999999
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||+ +|+|.+++.. ..+|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 135 v~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred EEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 99999 6799998865 478999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 841 DGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 841 ~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
... ...++..|.+||+..+ .++.++|||||||++|||+||+.|+....... ........+ .......
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-----~~~~~~~~~------~~~~~~~ 278 (311)
T 3p1a_A 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQ-----QLRQGYLPP------EFTAGLS 278 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH-----HHTTTCCCH------HHHTTSC
T ss_pred CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-----HHhccCCCc------ccccCCC
Confidence 221 2225566888998776 68999999999999999999987775322110 000000000 0011223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.++.+++.+||+.||++|||++|++++
T Consensus 279 ~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 279 SELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 567889999999999999999999863
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=349.42 Aligned_cols=252 Identities=19% Similarity=0.218 Sum_probs=192.0
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcC------
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------ 758 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------ 758 (955)
++|. ..+.||+|+||+||+|. ..+|+.||||++... ....+.+.+|++++++++|||||++++++...
T Consensus 62 ~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 62 KRYQ--NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp TTEE--EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred CCeE--EEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 4566 78899999999999998 457999999999753 22356678999999999999999999999754
Q ss_pred CeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 759 HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
...|+|||||++ ++.+.+....++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred CeEEEEEeCCCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 357999999975 58888888889999999999999999999999 99999999999999999999999999997654
Q ss_pred ccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc----------------cccc
Q 002186 839 LADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------------GLLG 901 (955)
Q Consensus 839 ~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~----------------~~~~ 901 (955)
..... ...++++|.+||+..+..++.++||||+||++|||++|+.||.+......+... ....
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 33221 223567799999998889999999999999999999999999754321100000 0000
Q ss_pred ccccccc---------------cCCCCc-hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 902 EMYNENE---------------VGSSSS-LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 902 ~~~~~~~---------------~~~~~~-~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
......+ ...... .......+.+++.+||+.||++|||++|++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 000000 11225678899999999999999999999874
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-37 Score=337.83 Aligned_cols=244 Identities=21% Similarity=0.278 Sum_probs=189.6
Q ss_pred hhhhccCCCCCceEEEeC-CCCcE----EEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGIT----VSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~----vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||+||+|+. .+|+. ||+|.+.... ...+.+.+|+.++++++|||||+++++|. .+..++||||
T Consensus 17 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEe
Confidence 788999999999999984 45554 7888775432 22345678899999999999999999986 4568999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 96 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 172 (325)
T 3kex_A 96 LPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 172 (325)
T ss_dssp CTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCC
T ss_pred CCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcccccc
Confidence 999999999965 467888999999999999999999 9999999999999999999999999999865433221
Q ss_pred ---CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 844 ---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 844 ---~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
...+...|.+||......++.++|||||||++|||+| |+.||....... ....+... ....... ...
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~---~~~~~~~---~~~ 243 (325)
T 3kex_A 173 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPDLLEKG---ERLAQPQ---ICT 243 (325)
T ss_dssp C-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHHHHHTT---CBCCCCT---TBC
T ss_pred cccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHHHHHcC---CCCCCCC---cCc
Confidence 1123445788999988889999999999999999999 998886432111 00001000 0000011 112
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
..+.+++.+||+.||++|||++|++++|+.+.
T Consensus 244 ~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 244 IDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 34667888999999999999999999998764
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=337.70 Aligned_cols=247 Identities=15% Similarity=0.137 Sum_probs=192.4
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++.++ +|||||++++++.+.+..|+
T Consensus 10 ~y~--~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 10 DFD--LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred heE--EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 355 788999999999999995 579999999997542 2245577889999887 89999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 88 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999999975 578888999999999999999999 99999999999999999999999999987532221
Q ss_pred --CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---ccccccccccccccccCCCCchH
Q 002186 842 --GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---KPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 842 --~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
.....+++.|.+||+.....++.++||||+||++|||+||+.||........ .........+.... ...+.
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~--- 240 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPR--- 240 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-CCCCT---
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-CCCCC---
Confidence 1122356778899999888899999999999999999999999963211100 00001111111111 11111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSM------EEALK 945 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~------~ev~~ 945 (955)
.....+.+++.+||+.||++||++ +|+++
T Consensus 241 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 241 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 123457788999999999999995 66664
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-37 Score=341.74 Aligned_cols=247 Identities=17% Similarity=0.196 Sum_probs=194.7
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 778999999999999984 356789999997532 2356788999999999 8999999999999999999999
Q ss_pred eecCCCChhHHhhcC-------------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 766 DYLPNGNLSEKIRTK-------------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 766 ey~~~gsL~~~l~~~-------------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
||+++|+|.+++... .++..+..++.|+++||+|||+. +|+||||||+||++
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll 205 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLV 205 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGEEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEE
Confidence 999999999999752 57888899999999999999999 99999999999999
Q ss_pred CCCCCceECcccccccccccCCCC----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
+.++.+||+|||+++......... ..++..|.+||......++.++|||||||++|||+| |+.||....... .
T Consensus 206 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~ 283 (344)
T 1rjb_A 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA--N 283 (344)
T ss_dssp ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--H
T ss_pred cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH--H
Confidence 999999999999987654332211 113345788998888889999999999999999999 888886432211 0
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
............ .. ......+.+++.+||+.||++|||++|++++|+.+..
T Consensus 284 ~~~~~~~~~~~~---~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 284 FYKLIQNGFKMD---QP---FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp HHHHHHTTCCCC---CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHHHHhcCCCCC---CC---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 001111111110 01 1123457788999999999999999999999987654
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=328.99 Aligned_cols=248 Identities=20% Similarity=0.237 Sum_probs=189.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|+||+||+|.. .+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 778999999999999995 5799999999975322 346778999999999999999999999999999999999985
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCc
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFP 845 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~ 845 (955)
++.+.+.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 86 -~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 161 (292)
T 3o0g_A 86 -DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE 161 (292)
T ss_dssp -EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSC
T ss_pred -CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCC
Confidence 56555543 568889999999999999999999 999999999999999999999999999976543221 122
Q ss_pred ccccccCchhhhhccC-CcccccchhHHHHHHHHHhCCCCCCCCCCCCC----------------ccccccccccccc--
Q 002186 846 AKIAWTESGEFYNAMK-EEMYMDVYGFGEIILEILTNGRLTNAGSSLQN----------------KPIDGLLGEMYNE-- 906 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~~-~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~----------------~~~~~~~~~~~~~-- 906 (955)
.++.+|.+||...+.. ++.++||||+||++|||+||+.|+..+..... |............
T Consensus 162 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (292)
T 3o0g_A 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM 241 (292)
T ss_dssp CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCC
T ss_pred ccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccccccc
Confidence 3456688899886655 79999999999999999999999764332111 0000000000000
Q ss_pred --cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 907 --NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 907 --~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.........+.....+.+++.+|++.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000001112234567789999999999999999999863
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=338.45 Aligned_cols=252 Identities=15% Similarity=0.159 Sum_probs=194.9
Q ss_pred hhhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc------chHHHHHHHHHHHhccCCCCceeEeEEEE
Q 002186 684 ANDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA------TRIKIVSEFITRIGTVRHKNLIRLLGFCY 756 (955)
Q Consensus 684 ~~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~ 756 (955)
..++.++|. ..+.||+|+||+||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||+++++|.
T Consensus 21 ~~~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 98 (345)
T 3hko_A 21 LLELQKKYH--LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE 98 (345)
T ss_dssp HHHHHHHEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhhhee--ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc
Confidence 456677788 889999999999999985 578999999996532 23567889999999999999999999999
Q ss_pred cCCeeEEEEeecCCCChhHHhhc------------------------------------------CCCHHHHHHHHHHHH
Q 002186 757 NRHQAYLLYDYLPNGNLSEKIRT------------------------------------------KRDWAAKYKIVLGVA 794 (955)
Q Consensus 757 ~~~~~~lv~ey~~~gsL~~~l~~------------------------------------------~~~~~~~~~i~~~ia 794 (955)
+.+..++|||||++|+|.+++.. ..++.....++.|++
T Consensus 99 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 178 (345)
T 3hko_A 99 DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178 (345)
T ss_dssp CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 99999999999999999999852 013445678999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCCCeeeCCCC--CceECcccccccccccCC------CCcccccccCchhhhhc--cCCcc
Q 002186 795 RGLCFLHHDCYPAIPHGDLKASNIVFDENM--EPHLAEFGFKYLTQLADG------SFPAKIAWTESGEFYNA--MKEEM 864 (955)
Q Consensus 795 ~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~--~~ki~DfGl~~~~~~~~~------~~~~~~~~~~~~e~~~~--~~~~~ 864 (955)
+||+|||+. +|+||||||+||+++.++ .+||+|||+++....... ....++..|.+||.... ..++.
T Consensus 179 ~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 255 (345)
T 3hko_A 179 SALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255 (345)
T ss_dssp HHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred HHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence 999999999 999999999999998766 899999999875433211 11224566888998865 57888
Q ss_pred cccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 002186 865 YMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEAL 944 (955)
Q Consensus 865 ~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~ 944 (955)
++|||||||++|||+||+.||...... ...............+........+.+++.+||+.||++|||+.|++
T Consensus 256 ~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 256 KCDAWSAGVLLHLLLMGAVPFPGVNDA------DTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 999999999999999999998643211 11111111111111111122345677899999999999999999998
Q ss_pred HH
Q 002186 945 KL 946 (955)
Q Consensus 945 ~~ 946 (955)
+.
T Consensus 330 ~h 331 (345)
T 3hko_A 330 QH 331 (345)
T ss_dssp HS
T ss_pred cC
Confidence 73
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=349.12 Aligned_cols=246 Identities=15% Similarity=0.100 Sum_probs=193.3
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++++.++|||||+++++|.+++..|+|
T Consensus 70 ~y~--~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 147 (410)
T 3v8s_A 70 DYE--VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 147 (410)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccE--EEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 355 788999999999999995 479999999997532 1234577899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC--
Q 002186 765 YDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 841 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~-- 841 (955)
||||++|+|.+++++ ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 148 ~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 224 (410)
T 3v8s_A 148 MEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224 (410)
T ss_dssp ECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEE
T ss_pred EeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcc
Confidence 999999999999976 567888889999999999999999 99999999999999999999999999997654322
Q ss_pred -CCCcccccccCchhhhhccC----CcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 842 -GSFPAKIAWTESGEFYNAMK----EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 842 -~~~~~~~~~~~~~e~~~~~~----~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
.....+++.|.+||+..... ++.++|||||||++|||+||+.||...... .....+.........+...
T Consensus 225 ~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~~~p~~~ 298 (410)
T 3v8s_A 225 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMNHKNSLTFPDDN 298 (410)
T ss_dssp ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTHHHHCCCCTTC
T ss_pred cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh------hHHHHHHhccccccCCCcc
Confidence 11233667788999887654 778999999999999999999999743211 1111111110000001111
Q ss_pred HHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSD--RPSMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~--RPt~~ev~~~ 946 (955)
.....+.+++.+|+..+|++ ||+++||+++
T Consensus 299 ~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 299 DISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 12345678888999999988 9999999864
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=330.14 Aligned_cols=247 Identities=21% Similarity=0.263 Sum_probs=199.1
Q ss_pred hcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
.|. ..+.||+|+||.||+|... +|..||||+++......+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 14 ~~~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 91 (288)
T 3kfa_A 14 DIT--MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91 (288)
T ss_dssp GEE--EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred cee--EEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcC
Confidence 355 7788999999999999964 6889999999876666778899999999999999999999999999999999999
Q ss_pred CCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 769 PNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 769 ~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
++|+|.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 92 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 168 (288)
T 3kfa_A 92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168 (288)
T ss_dssp TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEE
T ss_pred CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCcccc
Confidence 99999999964 368888999999999999999999 99999999999999999999999999987654322111
Q ss_pred ---cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 845 ---PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 845 ---~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
..+...|.+||......++.++||||+||++|||+| |..|+....... ........... ... .....
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~~~~~~~~~---~~~---~~~~~ 239 (288)
T 3kfa_A 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKDYRM---ERP---EGCPE 239 (288)
T ss_dssp ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHHHTTCCC---CCC---TTCCH
T ss_pred ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHhccCCC---CCC---CCCCH
Confidence 112345788999888889999999999999999999 777775432111 00111111111 001 12234
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+.+++..|++.||++|||++|+++.|+.+
T Consensus 240 ~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 240 KVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 577889999999999999999999998865
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-37 Score=338.01 Aligned_cols=248 Identities=17% Similarity=0.224 Sum_probs=185.2
Q ss_pred hcccchhhhccCCCCCceEEEeCCC-C---cEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCee-
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPT-G---ITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA- 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~-g---~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~- 761 (955)
+|. ..+.||+|+||.||+|.... + ..||||+++.. ....+.+.+|++++++++|||||++++++...+..
T Consensus 24 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 24 QFT--LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp -CE--EEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred HeE--EeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 355 78899999999999999653 3 27999999753 23456788999999999999999999999877655
Q ss_pred -----EEEEeecCCCChhHHhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceE
Q 002186 762 -----YLLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828 (955)
Q Consensus 762 -----~lv~ey~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki 828 (955)
++||||+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 999999999999999864 368889999999999999999999 9999999999999999999999
Q ss_pred CcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccc
Q 002186 829 AEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 903 (955)
Q Consensus 829 ~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 903 (955)
+|||+++........ ...+...|.+||......++.++|||||||++|||+| |+.||....... .....
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~ 252 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYL 252 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHH
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH------HHHHH
Confidence 999998764332211 1112345788898888889999999999999999999 777776432211 11111
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 904 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
......... ......+.+++.+||+.||++|||++|+++.|+++.
T Consensus 253 ~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 253 IGGNRLKQP---PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp HTTCCCCCC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCC---CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111101111 122345778999999999999999999999998764
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=341.52 Aligned_cols=245 Identities=20% Similarity=0.230 Sum_probs=183.2
Q ss_pred hhhhccCCCCCceEEEeCC--C--CcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEc-CCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVLP--T--GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~--~--g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ey 767 (955)
..+.||+|+||.||+|+.. + +..||||.++... ...+.+.+|++++++++|||||+++++|.. ++..++||||
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEEC
Confidence 5678999999999999853 3 3468999986532 345678899999999999999999999865 4578999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 842 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-- 842 (955)
+++|+|.++++. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 173 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 249 (373)
T 3c1x_A 173 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 249 (373)
T ss_dssp CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred CCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccccccc
Confidence 999999999975 357888899999999999999999 999999999999999999999999999875432211
Q ss_pred ----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 843 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 843 ----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
........|.+||......++.++|||||||++|||+||+.|++.+....... ...........+. ..
T Consensus 250 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~-----~~~~~~~~~~~p~---~~ 321 (373)
T 3c1x_A 250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-----VYLLQGRRLLQPE---YC 321 (373)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH-----HHHHTTCCCCCCT---TC
T ss_pred ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH-----HHHHcCCCCCCCC---CC
Confidence 11113345788999888889999999999999999999655544332221111 0111111011111 12
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
...+.+++.+||+.||++|||++|+++.|+.+
T Consensus 322 ~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 322 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 34577889999999999999999999999865
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-37 Score=336.27 Aligned_cols=248 Identities=18% Similarity=0.223 Sum_probs=197.2
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCe
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~ 760 (955)
.|. ..+.||+|+||.||+|+. .+++.||||+++.... ..+.+.+|+++++++ +|||||+++++|.+++.
T Consensus 24 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 24 RLS--FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GEE--EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhh--HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 355 778899999999999973 4678999999975432 356788999999999 99999999999999999
Q ss_pred eEEEEeecCCCChhHHhhcC--------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 761 AYLLYDYLPNGNLSEKIRTK--------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~~--------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
.++||||+++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 99999999999999999752 67889999999999999999999 99999999999999
Q ss_pred CCCCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
+.++.+||+|||+++........ ...+...|.+||......++.++|||||||++|||+| |+.||....... .
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~- 256 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-K- 256 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-H-
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-H-
Confidence 99999999999998765433221 1123345788998888889999999999999999999 888876432111 0
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
............ . . ......+.+++.+||+.||++|||++|++++|+++
T Consensus 257 ~~~~~~~~~~~~-~--~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 305 (313)
T 1t46_A 257 FYKMIKEGFRML-S--P---EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (313)
T ss_dssp HHHHHHHTCCCC-C--C---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhccCCCCC-C--c---ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 001111111110 0 1 11234577889999999999999999999999865
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=328.32 Aligned_cols=247 Identities=16% Similarity=0.173 Sum_probs=185.9
Q ss_pred hcccchhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|... .+..||||+++... ...+.+.+|+..+++++|||||++++++. ++..++
T Consensus 16 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 16 RIE--LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GEE--EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred HeE--EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 355 7788999999999999853 35679999987532 23567889999999999999999999984 567899
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 9999999999999974 468899999999999999999999 9999999999999999999999999998765432
Q ss_pred CCC---CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 841 DGS---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 841 ~~~---~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
... ...+...|.+||......++.++||||+||++|||+| |..||...... .....+......... .
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~------~~~~~i~~~~~~~~~---~ 240 (281)
T 1mp8_A 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN------DVIGRIENGERLPMP---P 240 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG------GHHHHHHTTCCCCCC---T
T ss_pred cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH------HHHHHHHcCCCCCCC---C
Confidence 211 1113345788999888889999999999999999997 77787643211 111111111101111 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.....+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 241 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 22345778899999999999999999999998763
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-37 Score=333.09 Aligned_cols=243 Identities=18% Similarity=0.233 Sum_probs=191.4
Q ss_pred hhhhccCCCCCceEEEeCC-CC-------cEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLP-TG-------ITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g-------~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||.||+|+.. +| ..||+|+++... ...+.+.+|++++++++|||||++++++.+++..++||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence 7788999999999999853 33 579999997543 34667889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC--------ceECccccc
Q 002186 766 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--------PHLAEFGFK 834 (955)
Q Consensus 766 ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~--------~ki~DfGl~ 834 (955)
||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 92 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~ 168 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168 (289)
T ss_dssp ECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSC
T ss_pred ECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeeccCccc
Confidence 99999999999975 278889999999999999999999 9999999999999998887 999999998
Q ss_pred ccccccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 835 YLTQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
....... ...+...|.+||.... ..++.++|||||||++|||+||+.|+......... ..... ..... ..
T Consensus 169 ~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~--~~~~~---~~~~~--~~ 239 (289)
T 4fvq_A 169 ITVLPKD--ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK--LQFYE---DRHQL--PA 239 (289)
T ss_dssp TTTSCHH--HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HHHHH---TTCCC--CC
T ss_pred ccccCcc--ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH--HHHhh---ccCCC--CC
Confidence 6432211 1123445788898876 67899999999999999999987766543221100 00000 00001 00
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
. ....+.+++.+||+.||++|||++|+++.|+++..
T Consensus 240 ~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 240 P---KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp C---SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred C---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 0 12346688889999999999999999999998754
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-37 Score=346.20 Aligned_cols=241 Identities=15% Similarity=0.182 Sum_probs=183.5
Q ss_pred hhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHh-ccCCCCceeEeEEEEc----CCeeEEEEeecCC
Q 002186 697 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIG-TVRHKNLIRLLGFCYN----RHQAYLLYDYLPN 770 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~-~l~H~niv~l~g~~~~----~~~~~lv~ey~~~ 770 (955)
+.||+|+||+||+|.. .+|+.||||+++.. ..+.+|++++. ..+|||||++++++.. .+..|+|||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 6799999999999985 57999999999632 34567777764 4589999999999875 5678999999999
Q ss_pred CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---CCCceECcccccccccccCC-
Q 002186 771 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 771 gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DfGl~~~~~~~~~- 842 (955)
|+|.+++.. ..++.+...|+.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++.......
T Consensus 144 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~ 220 (400)
T 1nxk_A 144 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 220 (400)
T ss_dssp EEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----
T ss_pred CcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCCCcc
Confidence 999999976 368899999999999999999998 9999999999999997 78899999999976543221
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
....++.+|.+||+.....++.++|||||||++|||+||+.||.......... .....+.........+.+.....++
T Consensus 221 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~s~~~ 298 (400)
T 1nxk_A 221 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--GMKTRIRMGQYEFPNPEWSEVSEEV 298 (400)
T ss_dssp ------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC--SHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH--HHHHHHHcCcccCCCcccccCCHHH
Confidence 12235667889999988889999999999999999999999997543321110 0000000000000011112233567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+++.+||+.||++|||++|++++
T Consensus 299 ~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 299 KMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHCCCChhHCcCHHHHhcC
Confidence 889999999999999999999874
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-37 Score=333.66 Aligned_cols=251 Identities=10% Similarity=0.021 Sum_probs=196.4
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEee
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
.|. ..+.||+|+||.||+|+ ..+|+.||||++.... ..+.+.+|++.++++ +|+|++++++++.+.+..++||||
T Consensus 11 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 11 HYK--VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TEE--EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred ceE--EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 355 78889999999999999 4689999999986432 234567889999998 799999999999999999999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC-----ceECcccccccccc
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-----PHLAEFGFKYLTQL 839 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~-----~ki~DfGl~~~~~~ 839 (955)
+ +|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++....
T Consensus 88 ~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 88 L-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred c-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 9 9999999974 478999999999999999999998 9999999999999987776 99999999876543
Q ss_pred cCC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 840 ADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 840 ~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
... ....++..|.+||...+..++.++|||||||++|||+||+.||.......... ....+.......
T Consensus 164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~ 240 (298)
T 1csn_A 164 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ---KYERIGEKKQST 240 (298)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH---HHHHHHHHHHHS
T ss_pred ccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH---HHHHHHhhccCc
Confidence 221 11224566889999988889999999999999999999999997533211111 011110000000
Q ss_pred C-CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 911 S-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 911 ~-~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
. ..........+.+++.+||+.||++|||++||++.|+++
T Consensus 241 ~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 241 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 0 000012235678899999999999999999999998865
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=328.80 Aligned_cols=246 Identities=19% Similarity=0.269 Sum_probs=196.7
Q ss_pred hcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
.|. ..+.||+|+||.||+|...++..||||+++......+.+.+|++++++++||||+++++++.+ +..++||||++
T Consensus 14 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 90 (279)
T 1qpc_A 14 TLK--LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME 90 (279)
T ss_dssp GEE--EEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred hhh--heeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCC
Confidence 355 778999999999999998888899999998766567788999999999999999999999864 56899999999
Q ss_pred CCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---
Q 002186 770 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 842 (955)
Q Consensus 770 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--- 842 (955)
+|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 167 (279)
T 1qpc_A 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167 (279)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccc
Confidence 9999999975 578999999999999999999999 999999999999999999999999999876543211
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
........|.+||......++.++|||||||++|||+| |+.|+...... .....+......... ......
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~ 238 (279)
T 1qpc_A 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP------EVIQNLERGYRMVRP---DNCPEE 238 (279)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHHHHHHTTCCCCCC---TTCCHH
T ss_pred cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH------HHHHHHhcccCCCCc---ccccHH
Confidence 11112345788898888888999999999999999999 77777542211 001111110000001 112345
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+.+++..|++.||++|||++|+++.|+.+
T Consensus 239 l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 239 LYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 77889999999999999999999998865
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=336.31 Aligned_cols=240 Identities=16% Similarity=0.133 Sum_probs=194.7
Q ss_pred hHhhhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc---------hHHHHHHHHHHHhccCCCCceeEeEEE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFC 755 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~ 755 (955)
+..+.|. ..+.||+|+||.||+|+ ..+|+.||||+++.... ..+.+.+|++++++++|||||++++++
T Consensus 21 ~~~~~y~--~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~ 98 (335)
T 3dls_A 21 EYSQKYS--TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF 98 (335)
T ss_dssp HHHHHEE--EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE
T ss_pred ccccceE--EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 4556677 88899999999999998 56899999999975421 233567799999999999999999999
Q ss_pred EcCCeeEEEEeecCCC-ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccc
Q 002186 756 YNRHQAYLLYDYLPNG-NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 832 (955)
Q Consensus 756 ~~~~~~~lv~ey~~~g-sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfG 832 (955)
.+.+..++||||+.+| +|.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 99 ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp ECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred eeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999999877 99999976 468889999999999999999999 99999999999999999999999999
Q ss_pred ccccccccCCCC-cccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 833 FKYLTQLADGSF-PAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 833 l~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
+++......... ..++..|.+||......+ +.++|||||||++|||+||+.||...... .......
T Consensus 176 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~---- 243 (335)
T 3dls_A 176 SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------VEAAIHP---- 243 (335)
T ss_dssp TCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------TTTCCCC----
T ss_pred cceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------HhhccCC----
Confidence 987654332221 225566888998877665 78899999999999999999998632110 0111111
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.. ....+.+++.+||+.||++|||++|+++.
T Consensus 244 -~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 244 -PYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -SSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -Ccc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 12457788899999999999999999975
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=326.74 Aligned_cols=242 Identities=17% Similarity=0.216 Sum_probs=191.8
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
+|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 10 DFE--IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cEE--EeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 355 778999999999999984 5788999999965321 245688999999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 999999999999875 568888999999999999999998 999999999999999999999999999865433322
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
....+...|.+||...+..++.++||||+||++|||++|+.||...... .....+.... ...+. .....+
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~~~---~~~~~~ 234 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVE-FTFPD---FVTEGA 234 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTC-CCCCT---TSCHHH
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH------HHHHHHHhCC-CCCCC---cCCHHH
Confidence 2233556688999998888899999999999999999999998643211 0111111111 11111 122456
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+++.+||+.||++|||++|++++
T Consensus 235 ~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 235 RDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHhccChhhCCCHHHHhhC
Confidence 788999999999999999999964
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=333.67 Aligned_cols=250 Identities=18% Similarity=0.175 Sum_probs=198.4
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-------hHHHHHHHHHHHhccCCCCceeEeEEEE
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCY 756 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~ 756 (955)
..+.+.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++||||+++++++.
T Consensus 8 ~~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 85 (321)
T 2a2a_A 8 QKVEDFYD--IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE 85 (321)
T ss_dssp SCHHHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhccEE--EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 34455677 788999999999999995 4799999999975321 2567889999999999999999999999
Q ss_pred cCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC----CceECc
Q 002186 757 NRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAE 830 (955)
Q Consensus 757 ~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~----~~ki~D 830 (955)
+.+..++||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 86 NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred cCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEcc
Confidence 99999999999999999999976 357888999999999999999999 999999999999999887 799999
Q ss_pred ccccccccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 831 FGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 831 fGl~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
||+++....... ....++..|.+||...+..++.++||||+||++|||+||+.||...... .....+.... .
T Consensus 163 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~-~ 235 (321)
T 2a2a_A 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANITSVS-Y 235 (321)
T ss_dssp CTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHTTC-C
T ss_pred CccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhcc-c
Confidence 999876543322 1223556688999998888999999999999999999999998643211 0111111100 0
Q ss_pred CCCCc-hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 910 GSSSS-LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 910 ~~~~~-~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...+. .......+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 01123457789999999999999999999874
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=325.49 Aligned_cols=247 Identities=17% Similarity=0.213 Sum_probs=190.3
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 762 (955)
++.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..+
T Consensus 19 ~i~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 96 (285)
T 3is5_A 19 TIDDLFI--FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMY 96 (285)
T ss_dssp CHHHHEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred Chhhhee--ecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEE
Confidence 3445677 788999999999999985 579999999997643 24577889999999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee---CCCCCceECcccc
Q 002186 763 LLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGF 833 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DfGl 833 (955)
+||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~ 173 (285)
T 3is5_A 97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGL 173 (285)
T ss_dssp EEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred EEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence 99999999999998853 468889999999999999999999 99999999999999 4567899999999
Q ss_pred cccccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCC
Q 002186 834 KYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 834 ~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
++........ ...++..|.+||... ..++.++||||+||++|||+||+.||....... .... . ....+. . .
T Consensus 174 a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~-~-~~~~~~-~--~ 245 (285)
T 3is5_A 174 AELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQK-A-TYKEPN-Y--A 245 (285)
T ss_dssp CCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH-H-HHCCCC-C--C
T ss_pred ceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhh-h-ccCCcc-c--c
Confidence 8765432221 223556688889875 467889999999999999999999986432100 0000 0 000000 0 0
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.........+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 246 VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000012245678899999999999999999986
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=333.31 Aligned_cols=250 Identities=18% Similarity=0.271 Sum_probs=193.1
Q ss_pred hhhhccCCCCCceEEEe-----CCCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-----~~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 765 (955)
..+.||+|+||.||+|+ ..+|+.||||+++... ...+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEE
Confidence 77899999999999998 4579999999997532 2356788999999999999999999999876 6689999
Q ss_pred eecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 766 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
||+++|+|.+++.. ..++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 105 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 181 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181 (302)
T ss_dssp ECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCC
T ss_pred EeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccccCCCc
Confidence 99999999999954 468899999999999999999999 999999999999999999999999999876543221
Q ss_pred -----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCC--------CC-Cccccccccccccccc
Q 002186 843 -----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSS--------LQ-NKPIDGLLGEMYNENE 908 (955)
Q Consensus 843 -----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~--------~~-~~~~~~~~~~~~~~~~ 908 (955)
....++..|.+||......++.++||||+||++|||+||+.|+..... .. ................
T Consensus 182 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (302)
T 4e5w_A 182 YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKR 261 (302)
T ss_dssp EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCC
T ss_pred ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCC
Confidence 112234457888988888889999999999999999999987542100 00 0000000001101110
Q ss_pred cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 909 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
. +........+.+++.+||+.||++|||++|+++.|+.+
T Consensus 262 ~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 262 L---PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp C---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred C---CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 1 11112235677899999999999999999999999875
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-37 Score=361.24 Aligned_cols=244 Identities=17% Similarity=0.211 Sum_probs=196.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|...++..||||+++......+.+.+|+++|++++|||||+++++|.+ +..++|||||++|+|.
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 678899999999999998888889999998765566789999999999999999999999976 6789999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---CCCccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAK 847 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~---~~~~~~ 847 (955)
++++. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ......
T Consensus 350 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 426 (535)
T 2h8h_A 350 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 426 (535)
T ss_dssp HHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTS
T ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcC
Confidence 99974 378999999999999999999999 99999999999999999999999999987643211 111112
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||......++.++|||||||++|||+| |+.||...... .....+......... ......+.+++
T Consensus 427 ~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~------~~~~~i~~~~~~~~~---~~~~~~l~~li 497 (535)
T 2h8h_A 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------EVLDQVERGYRMPCP---PECPESLHDLM 497 (535)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH------HHHHHHHTTCCCCCC---TTCCHHHHHHH
T ss_pred cccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCCCCC---CCCCHHHHHHH
Confidence 334778898888889999999999999999999 78787532211 011111111001111 12234577899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhccC
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+||+.||++|||++||++.|+.+.
T Consensus 498 ~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 498 CQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred HHHcCCChhHCcCHHHHHHHHHHHh
Confidence 9999999999999999999999774
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=336.48 Aligned_cols=240 Identities=13% Similarity=0.103 Sum_probs=195.8
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus 42 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 42 QFD--RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HCE--EEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 465 788999999999999995 589999999997532 2356678899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.+ ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 999999999999975 568888999999999999999999 999999999999999999999999999976543322
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...+++.|.+||+..+..++.++||||+||++|||+||+.||...... .....+.... ...+. .....+
T Consensus 197 -~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~~~~~ 265 (350)
T 1rdq_E 197 -TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI------QIYEKIVSGK-VRFPS---HFSSDL 265 (350)
T ss_dssp -CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TCCHHH
T ss_pred -cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH------HHHHHHHcCC-CCCCC---CCCHHH
Confidence 223566788999998888999999999999999999999998743211 1111111111 11111 123457
Q ss_pred HHHHHHccCCCCCCCCC-----HHHHHH
Q 002186 923 LDVALLCTRSTPSDRPS-----MEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt-----~~ev~~ 945 (955)
.+++.+||+.||++||+ ++|+++
T Consensus 266 ~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 78899999999999998 888875
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=342.47 Aligned_cols=304 Identities=18% Similarity=0.140 Sum_probs=210.3
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
..++.|||++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 46889999999999888888999999999999999998888888999999999999999888766667888888899999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~ 260 (955)
++|.+++..|..|.++++|++|+|++|.+++..|..+..+++|++|++++|.+.+ .
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~------------------------~ 167 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS------------------------I 167 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS------------------------C
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc------------------------c
Confidence 8888888888888888888888888888876666555555555555555554443 3
Q ss_pred CCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCC
Q 002186 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (955)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 340 (955)
.+..+.++++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+.+|..+....+|+.|++++|++++..+..+..+
T Consensus 168 ~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 247 (477)
T 2id5_A 168 PTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHL 247 (477)
T ss_dssp CHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTC
T ss_pred ChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCc
Confidence 33444555555555555555555555555555555555555555554444444444456666666666654433455666
Q ss_pred CCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEEC
Q 002186 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRL 420 (955)
Q Consensus 341 ~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~L 420 (955)
++|+.|++++|.+++..+..+..+++|+.|++++|.+++..| ..|.++++|+.|+|
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~------------------------~~~~~l~~L~~L~L 303 (477)
T 2id5_A 248 VYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEP------------------------YAFRGLNYLRVLNV 303 (477)
T ss_dssp TTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECT------------------------TTBTTCTTCCEEEC
T ss_pred cccCeeECCCCcCCccChhhccccccCCEEECCCCccceECH------------------------HHhcCcccCCEEEC
Confidence 666666666666665555556666666666666665554333 34455667777777
Q ss_pred cCCccccccchhccCCCCCCEEECCCCcCCCC
Q 002186 421 EDNSFSGEIPLKFSQLPDINYIDLSRNGFTGG 452 (955)
Q Consensus 421 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 452 (955)
++|++++..+..|..+++|+.|++++|.+...
T Consensus 304 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 304 SGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp CSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred CCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 77777766666677777777777777777643
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=336.45 Aligned_cols=260 Identities=18% Similarity=0.202 Sum_probs=196.5
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhc--cCCCCceeEeEEEEcCC---
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGT--VRHKNLIRLLGFCYNRH--- 759 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~~--- 759 (955)
..+.+.|. ..+.||+|+||.||+|+. +|+.||||+++.. ..+.+.+|++++.. ++||||+++++++...+
T Consensus 38 ~~~~~~y~--~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 38 RTIARTIV--LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHCE--EEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ccccccEE--EEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 34456677 888999999999999997 6999999999643 34556677777766 79999999999998876
Q ss_pred -eeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHh--------cCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 760 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLH--------HDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 760 -~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH--------~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
..++||||+++|+|.+++.+ ..++.++..++.|+++||+||| +. +|+||||||+||+++.++.+||+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEEC
T ss_pred ceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEE
Confidence 78999999999999999976 5689999999999999999999 56 99999999999999999999999
Q ss_pred cccccccccccCC------CCcccccccCchhhhhcc------CCcccccchhHHHHHHHHHhC----------CCCCCC
Q 002186 830 EFGFKYLTQLADG------SFPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTN----------GRLTNA 887 (955)
Q Consensus 830 DfGl~~~~~~~~~------~~~~~~~~~~~~e~~~~~------~~~~~~DV~S~Gvvl~Elltg----------~~p~~~ 887 (955)
|||+++....... ....++..|.+||..... .++.++|||||||++|||+|| +.||..
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~ 269 (342)
T 1b6c_B 190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269 (342)
T ss_dssp CCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred ECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccc
Confidence 9999876543321 122345568888987654 234689999999999999999 455543
Q ss_pred CCCCCCccccccccccccccccC-CCC--chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 888 GSSLQNKPIDGLLGEMYNENEVG-SSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
...... ................ ... ...+....+.+++.+||+.||++|||++||+++|+.+.+.
T Consensus 270 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 270 LVPSDP-SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TSCSSC-CHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cCcCcc-cHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 211110 0000000111110000 011 1134566788999999999999999999999999987543
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=330.24 Aligned_cols=253 Identities=14% Similarity=0.176 Sum_probs=189.8
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc----cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
..|. ..+.||+|+||.||+|.. .+|+.||||+++.. ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 32 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 32 ANFR--IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGEE--EEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cceE--EEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 3455 788999999999999984 68999999999752 2235678899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 764 LYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999863 367888999999999999999999 9999999999999999999999999998754
Q ss_pred cccCCC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 838 QLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 838 ~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
...... ...+...|.+||......++.++|||||||++|||+||+.||........ ...........+. .. .
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~-~~-~--- 260 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLCKKIEQCDYPP-LP-S--- 260 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHH-HHHHHHHTTCSCC-CC-T---
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHH-HHHHHhhcccCCC-Cc-c---
Confidence 332211 11245568889998888899999999999999999999999874321110 0000010100000 00 0
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
......+.+++.+||+.||++|||++||++.|+++++
T Consensus 261 ~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 261 DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 1123457788999999999999999999999988753
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=347.40 Aligned_cols=238 Identities=15% Similarity=0.202 Sum_probs=192.7
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+.+..++||||++
T Consensus 20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 778899999999999995 489999999997532 124578899999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-CCcc
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 846 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-~~~~ 846 (955)
+|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 100 gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~ 176 (476)
T 2y94_A 100 GGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC 176 (476)
T ss_dssp SEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCC
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccccccccC
Confidence 9999999975 468888999999999999999998 999999999999999999999999999876543221 1223
Q ss_pred cccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
+++.|.+||...+..+ +.++||||+||++|||+||+.||...... .....+.+.. ...+. .....+.++
T Consensus 177 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~s~~~~~L 246 (476)
T 2y94_A 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP------TLFKKICDGI-FYTPQ---YLNPSVISL 246 (476)
T ss_dssp SCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH------HHHHHHHTTC-CCCCT---TCCHHHHHH
T ss_pred CCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH------HHHHHHhcCC-cCCCc---cCCHHHHHH
Confidence 5667889998877654 68899999999999999999998743211 1111111111 10011 122457788
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 002186 926 ALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+.+||+.||++|||++|+++
T Consensus 247 i~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 247 LKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp HHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHcCCCchhCcCHHHHHh
Confidence 99999999999999999986
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=337.67 Aligned_cols=249 Identities=17% Similarity=0.222 Sum_probs=191.0
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
++.+.|. ..+.||+|+||+||+|.. .+|+.||||+++.... ...+|++++.++ +|||||++++++.+.+..|+
T Consensus 19 ~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 19 QFTDGYE--VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp CHHHHEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred CccccEE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 3445576 778999999999999985 5799999999975432 234677888777 79999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC----CCceECcccccccc
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN----MEPHLAEFGFKYLT 837 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~----~~~ki~DfGl~~~~ 837 (955)
|||||++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||++..+ +.+||+|||+++..
T Consensus 94 v~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp EECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999999975 457888899999999999999999 99999999999998533 34999999999765
Q ss_pred cccCCC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 838 QLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 838 ~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
...... ...+++.|.+||+.....++.++||||+||++|||+||+.||........ ......+...........+
T Consensus 171 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~---~~~~~~i~~~~~~~~~~~~ 247 (342)
T 2qr7_A 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP---EEILARIGSGKFSLSGGYW 247 (342)
T ss_dssp BCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH---HHHHHHHHHCCCCCCSTTT
T ss_pred cCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH---HHHHHHHccCCcccCcccc
Confidence 433221 22356678899998887788999999999999999999999974322111 1111111111100001111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 223356778999999999999999999985
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=337.10 Aligned_cols=247 Identities=21% Similarity=0.272 Sum_probs=193.6
Q ss_pred hcccchhhhccCCCCCceEEEeC--------CCCcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR 758 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~--------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 758 (955)
.|. ..+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+++++++ +|||||+++++|.+.
T Consensus 36 ~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 36 KLT--LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GEE--EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HeE--EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 355 778899999999999984 367899999997543 2356788999999999 899999999999999
Q ss_pred CeeEEEEeecCCCChhHHhhcC------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 759 HQAYLLYDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~~------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
+..++||||+++|+|.+++... .++.++..++.|+++||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 9999999999999999999752 57888999999999999999999 99999999999999
Q ss_pred CCCCCceECcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
+.++.+||+|||+++....... ........|.+||......++.++|||||||++|||+| |+.|+..... .
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~--- 266 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-E--- 266 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-H---
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-H---
Confidence 9999999999999875443211 11113345788898888888999999999999999999 8888763221 0
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.....+......... ......+.+++..||+.||++|||++|+++.|+++
T Consensus 267 --~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 267 --ELFKLLKEGHRMDKP---ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp --HHHHHHHHTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHHHhcCCCCCCC---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011111110000001 12234577889999999999999999999999865
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=324.91 Aligned_cols=242 Identities=19% Similarity=0.252 Sum_probs=178.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+.|. ..+.||+|+||.||+|+. .+|+.||||.+..... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 11 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 11 EDFK--VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccce--eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 4455 778999999999999985 6899999999975322 24678899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 9999999999999975 368899999999999999999999 9999999999999999999999999998765422
Q ss_pred CCC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 841 DGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 841 ~~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
... ...++..|.+||......++.++||||+||++|||+||+.||........ ........ ...+. ..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~-~~~~~---~~ 235 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT------LNKVVLAD-YEMPS---FL 235 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCSSC-CCCCT---TS
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH------HHHHhhcc-cCCcc---cc
Confidence 211 12245567888988888889999999999999999999999874332111 01111110 00011 12
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 236 SIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 245678999999999999999999986
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=331.37 Aligned_cols=252 Identities=19% Similarity=0.214 Sum_probs=188.6
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc------hHHHHHHHHHHHhcc---CCCCceeEeEEEEcC
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT------RIKIVSEFITRIGTV---RHKNLIRLLGFCYNR 758 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~------~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~ 758 (955)
++|. ..+.||+|+||+||+|+. .+|+.||||+++.... ....+.+|+++++++ +|||||+++++|...
T Consensus 9 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 9 SRYE--PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp -CCE--EEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cceE--EEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3465 888999999999999995 6899999999964221 134556677776655 599999999999875
Q ss_pred C-----eeEEEEeecCCCChhHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 759 H-----QAYLLYDYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 759 ~-----~~~lv~ey~~~gsL~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
. ..++||||++ |+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5899999997 6999999763 68899999999999999999999 99999999999999999999999
Q ss_pred cccccccccccCCCC-cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------C
Q 002186 830 EFGFKYLTQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------N 893 (955)
Q Consensus 830 DfGl~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~ 893 (955)
|||+++......... ..++..|.+||......++.++||||+||++|||+||+.||....... .
T Consensus 163 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (308)
T 3g33_A 163 DFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 242 (308)
T ss_dssp SCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred eCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 999987654332222 235667889999988889999999999999999999999986432110 0
Q ss_pred ccccccc-cccccccccCC-CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 894 KPIDGLL-GEMYNENEVGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 894 ~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
|...... ...+.+..... ....++....+.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 243 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp SCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0000000 00000000000 00001223567889999999999999999999864
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=324.81 Aligned_cols=248 Identities=17% Similarity=0.153 Sum_probs=195.3
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
++.+.|. ..+.||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++++++||||++++++|.+.+..++
T Consensus 6 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 6 DINQYYT--LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp CHHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhEE--eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 3445676 788999999999999995 468899999997643 346678899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee---CCCCCceECccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DfGl~~~~~ 838 (955)
||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 84 VMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp EEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 9999999999998865 568889999999999999999999 99999999999999 788999999999987654
Q ss_pred ccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 839 LADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 839 ~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
..... ...++..|.+||...+. ++.++||||+||++|||+||+.||...... .....+..............
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 233 (277)
T 3f3z_A 161 PGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS------EVMLKIREGTFTFPEKDWLN 233 (277)
T ss_dssp TTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCCCHHHHTT
T ss_pred CccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhCCCCCCchhhhc
Confidence 33221 22355668888987654 889999999999999999999998643211 01111111110000000012
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 234 VSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 2356788999999999999999999985
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=342.97 Aligned_cols=312 Identities=19% Similarity=0.148 Sum_probs=229.5
Q ss_pred cccceeecCCC---------CcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccC
Q 002186 64 SWSGVKCNKNN---------TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISR 134 (955)
Q Consensus 64 ~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 134 (955)
.|..|.|.... ..+..++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~--l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFAS--FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTT--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccC--CCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 46788887532 24678999999999877777766 89999999999999999999999999999999999
Q ss_pred CcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc
Q 002186 135 NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214 (955)
Q Consensus 135 N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 214 (955)
|++++..+..|.++++|++|||++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 99998777789999999999999999999999999999999999999999999999999999999999999999998777
Q ss_pred hhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCc
Q 002186 215 AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTT 294 (955)
Q Consensus 215 ~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 294 (955)
..+..+++|+.|++++|.+.+..+..+.++++|++|++++|.+.+.+|.......+|++|++++|+++...+..|..+++
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 249 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY 249 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc
Confidence 78888888888888888877766666777777777777777666666555544555666666666655433344555555
Q ss_pred cCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCC
Q 002186 295 LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVST 374 (955)
Q Consensus 295 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~ 374 (955)
|+.|+|++|++++..+..|..+++|+.|++++|++++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 329 (477)
T 2id5_A 250 LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 329 (477)
T ss_dssp CCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCS
T ss_pred cCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccC
Confidence 55555555555554444555555555555555555544444444444454444444444433333333333344444433
Q ss_pred Ccc
Q 002186 375 NNF 377 (955)
Q Consensus 375 N~l 377 (955)
|.+
T Consensus 330 N~l 332 (477)
T 2id5_A 330 NPL 332 (477)
T ss_dssp SCE
T ss_pred CCc
Confidence 333
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=329.91 Aligned_cols=250 Identities=19% Similarity=0.245 Sum_probs=187.1
Q ss_pred cccchhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 691 FNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
|. ..+.||+|+||.||+|+... .||||+++... ...+.+.+|++++++++||||+++++++ ..+..++||||
T Consensus 26 y~--~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 26 IT--VGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp CE--EEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred ee--eeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 55 77899999999999998643 59999997533 2356788999999999999999999976 45668999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp CCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 999999999964 468889999999999999999999 9999999999999999999999999998754321111
Q ss_pred ---CcccccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 844 ---FPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 844 ---~~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
...++..|.+||... ...++.++||||+||++|||+||+.||........ ...........+. . ......
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~-~--~~~~~~ 253 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIEMVGRGSLSPD-L--SKVRSN 253 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-HHHHHHHTSCCCC-T--TSSCTT
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-HHHHhcccccCcc-h--hhcccc
Confidence 112455678888875 55678899999999999999999999874332110 0000000111111 0 111122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
....+.+++.+||+.||++|||++|+++.|+++..
T Consensus 254 ~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 254 CPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 33567889999999999999999999999998764
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=361.68 Aligned_cols=240 Identities=15% Similarity=0.175 Sum_probs=189.9
Q ss_pred hccCCCCCceEEEeC---CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 698 EAARPQSAAGCKAVL---PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~---~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
.||+|+||.||+|.. .++..||||+++... ...+.+.+|+++|++++|||||+++|+|.. +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 699999999999975 356789999997642 346788999999999999999999999987 56899999999999
Q ss_pred hhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-----
Q 002186 773 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF----- 844 (955)
Q Consensus 773 L~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~----- 844 (955)
|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 9999964 468999999999999999999999 99999999999999999999999999997653322111
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
......|.+||+.....++.++|||||||++|||+| |+.||....... ....+........+ ......+.
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~i~~~~~~~~p---~~~~~~l~ 569 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGKRMECP---PECPPELY 569 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH------HHHHHHTTCCCCCC---TTCCHHHH
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH------HHHHHHcCCCCCCC---CcCCHHHH
Confidence 112234788999988899999999999999999998 988886433211 11111111101111 12335677
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+++..||+.||++||+++||++.|+.+
T Consensus 570 ~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 570 ALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 899999999999999999999998764
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=334.15 Aligned_cols=242 Identities=14% Similarity=0.118 Sum_probs=186.0
Q ss_pred hcccchhhhccCCCCCceEEEeC----CCCcEEEEEEeeccc-----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCe
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 760 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++... .....+.+|++++++++|||||++++++.+.+.
T Consensus 18 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 18 CFE--LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GEE--EEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HeE--EEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 465 788999999999999985 589999999997542 224457789999999999999999999999999
Q ss_pred eEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
.|+||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 9999999999999999975 467888889999999999999999 99999999999999999999999999987533
Q ss_pred ccCC--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 839 LADG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 839 ~~~~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
.... ....++..|.+||......++.++||||+||++|||+||+.||...... .....+.... ...++
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~~~-~~~p~--- 242 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK------KTIDKILKCK-LNLPP--- 242 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTC-CCCCT---
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhCC-CCCCC---
Confidence 2211 1223556688999988888899999999999999999999998743211 1111111111 11111
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
.....+.+++.+||+.||++|| +++|++++
T Consensus 243 ~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 243 YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 1234577889999999999999 78888763
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=340.20 Aligned_cols=253 Identities=13% Similarity=0.115 Sum_probs=195.8
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCC--eeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++...+ ..++|||||+
T Consensus 13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 778999999999999995 469999999997533 23567789999999999999999999998755 7899999999
Q ss_pred CCChhHHhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee----CCCCCceECccccccccccc
Q 002186 770 NGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 770 ~gsL~~~l~~~-----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl----~~~~~~ki~DfGl~~~~~~~ 840 (955)
+|+|.+++... .++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 93 ~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp TEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 99999999762 78899999999999999999999 99999999999999 78888999999999765433
Q ss_pred CCC-CcccccccCchhhhhc--------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc--ccccccccc------
Q 002186 841 DGS-FPAKIAWTESGEFYNA--------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK--PIDGLLGEM------ 903 (955)
Q Consensus 841 ~~~-~~~~~~~~~~~e~~~~--------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~--~~~~~~~~~------ 903 (955)
... ...++..|.+||+... ..++.++|||||||++|||+||+.||......... .........
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (396)
T 4eut_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (396)
T ss_dssp GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCE
T ss_pred CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccch
Confidence 221 1224566888888764 46778899999999999999999998642221110 000000000
Q ss_pred -----------ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 904 -----------YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 904 -----------~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+.................+.+++.+||+.||++|||++|+++.++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred hheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 00000000112245566788999999999999999999999988765
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=324.93 Aligned_cols=247 Identities=17% Similarity=0.193 Sum_probs=194.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.+++..++|
T Consensus 6 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 6 DNYD--VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhh--hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 3455 788999999999999985 5799999999975432 345678899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC---ceECcccccccccc
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFGFKYLTQL 839 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~DfGl~~~~~~ 839 (955)
|||+++|+|.+.+.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++.....
T Consensus 84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999988865 468889999999999999999999 9999999999999986655 99999999865543
Q ss_pred cCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 840 ADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 840 ~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
... ....+...|.+||...+..++.++||||+||++|||++|+.||....... ............ ..+.....
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~----~~~~~~~~ 234 (284)
T 3kk8_A 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYAQIKAGAYDY----PSPEWDTV 234 (284)
T ss_dssp SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHTCCCC----CTTTTTTS
T ss_pred CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH--HHHHHHhccccC----Cchhhccc
Confidence 222 11235566889999988889999999999999999999999986432110 000000011000 01111122
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 235 TPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 3457789999999999999999999863
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=341.61 Aligned_cols=243 Identities=12% Similarity=-0.017 Sum_probs=172.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHH---HHHhccCCCCceeEe-------EEEEcC-
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFI---TRIGTVRHKNLIRLL-------GFCYNR- 758 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~---~~l~~l~H~niv~l~-------g~~~~~- 758 (955)
..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+ +.+++ +|||||+++ +++..+
T Consensus 66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETT
T ss_pred eeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCC
Confidence 788999999999999994 589999999998643 2345667774 45555 799988755 455433
Q ss_pred ----------------CeeEEEEeecCCCChhHHhhc---CCCHHHH------HHHHHHHHHHHHHHhcCCCCCcccCCC
Q 002186 759 ----------------HQAYLLYDYLPNGNLSEKIRT---KRDWAAK------YKIVLGVARGLCFLHHDCYPAIPHGDL 813 (955)
Q Consensus 759 ----------------~~~~lv~ey~~~gsL~~~l~~---~~~~~~~------~~i~~~ia~gl~~lH~~~~~~iiHrdl 813 (955)
...|+|||||+ |+|.+++.. ...+..+ ..++.|+++||+|||+. +|+||||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrDi 220 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGHF 220 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCcC
Confidence 23799999999 899999975 3455555 77889999999999999 9999999
Q ss_pred CCCCeeeCCCCCceECcccccccccccCCCCcccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCCCCCCCC
Q 002186 814 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSL 891 (955)
Q Consensus 814 k~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~ 891 (955)
||+|||++.++.+||+|||+++.......... ....|.+||.... ..++.++|||||||++|||+||+.||......
T Consensus 221 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~-~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~ 299 (371)
T 3q60_A 221 TPDNLFIMPDGRLMLGDVSALWKVGTRGPASS-VPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299 (371)
T ss_dssp SGGGEEECTTSCEEECCGGGEEETTCEEEGGG-SCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred CHHHEEECCCCCEEEEecceeeecCCCccCcc-CCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence 99999999999999999999976543221122 2366889999876 67899999999999999999999999854322
Q ss_pred CCccccc-cccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 892 QNKPIDG-LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 892 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....... ......... .. .+........+.+++.+||+.||++|||++|+++
T Consensus 300 ~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 300 IKGSWKRPSLRVPGTDS-LA-FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CTTCCCBCCTTSCCCCS-CC-CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cccchhhhhhhhccccc-cc-hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1111110 000000000 00 1111122356778999999999999999999975
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=324.43 Aligned_cols=246 Identities=19% Similarity=0.235 Sum_probs=189.5
Q ss_pred hcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcC-CeeEEEEeec
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-HQAYLLYDYL 768 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-~~~~lv~ey~ 768 (955)
.|. ..+.||+|+||.||+|.. +|+.||||.++... ..+.+.+|++++++++|||||++++++.+. +..++||||+
T Consensus 22 ~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 22 ELK--LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GEE--EEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hce--EEeEEecCCCceEEEEEE-cCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 355 788999999999999987 58999999997543 456788999999999999999999997654 4789999999
Q ss_pred CCCChhHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 769 PNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 769 ~~gsL~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
++|+|.+++... .++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 174 (278)
T 1byg_A 98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174 (278)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence 999999999752 68888999999999999999999 99999999999999999999999999987543322211
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
.....|.+||......++.++||||+||++|||+| |+.|+..... . .....+......... ......+.
T Consensus 175 -~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-~-----~~~~~~~~~~~~~~~---~~~~~~l~ 244 (278)
T 1byg_A 175 -KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-K-----DVVPRVEKGYKMDAP---DGCPPAVY 244 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-G-----GHHHHHTTTCCCCCC---TTCCHHHH
T ss_pred -CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-H-----HHHHHHhcCCCCCCc---ccCCHHHH
Confidence 23345788999888889999999999999999999 8888764321 1 011111111001001 12234577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
+++.+||+.||++|||++|+++.|+.++.
T Consensus 245 ~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 245 EVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 88899999999999999999999988754
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=327.91 Aligned_cols=245 Identities=17% Similarity=0.195 Sum_probs=191.5
Q ss_pred hhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee-EEEEee
Q 002186 695 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA-YLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~-~lv~ey 767 (955)
..+.||+|+||+||+|... ++..||||+++... ...+.+.+|++++++++|||||++++++.+.+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 5688999999999999842 33479999987533 2356788999999999999999999999876654 999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--- 841 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~--- 841 (955)
+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 105 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 181 (298)
T 3pls_A 105 MCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181 (298)
T ss_dssp CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred ccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence 999999999975 457888999999999999999999 99999999999999999999999999987542211
Q ss_pred ---CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 842 ---GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 842 ---~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
.....+...|.+||...+..++.++||||+||++|||+||+.|+......... .............. ..
T Consensus 182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~ 253 (298)
T 3pls_A 182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL-----THFLAQGRRLPQPE---YC 253 (298)
T ss_dssp SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGH-----HHHHHTTCCCCCCT---TC
T ss_pred cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHH-----HHHhhcCCCCCCCc---cc
Confidence 11122345578889988888999999999999999999988777644322110 00111111011111 12
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
...+.+++.+||+.||++|||++|+++.|+++
T Consensus 254 ~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~ 285 (298)
T 3pls_A 254 PDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285 (298)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 24577889999999999999999999998865
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=335.81 Aligned_cols=253 Identities=20% Similarity=0.250 Sum_probs=195.8
Q ss_pred hhhhccCCCCCceEEEe-----CCCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEc--CCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-----~~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~e 766 (955)
..+.||+|+||.||+|+ ..+|+.||||++.... ...+.+.+|++++++++||||+++++++.. .+..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEe
Confidence 78899999999999998 3578999999997543 335668899999999999999999999874 567899999
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
|+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 183 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 183 (327)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSE
T ss_pred ecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecccCCcc
Confidence 9999999999965 478999999999999999999998 999999999999999999999999999876533221
Q ss_pred ----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCC--------CCccccccccccccccccC
Q 002186 843 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL--------QNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 843 ----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 910 (955)
....+...|.+||...+..++.++||||+||++|||+||+.|+...... ..........+.......
T Consensus 184 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 262 (327)
T 3lxl_A 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQR- 262 (327)
T ss_dssp EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCC-
T ss_pred ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccC-
Confidence 1112344578899888888899999999999999999999987632110 000000000000111000
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
.+........+.+++.+||+.||++|||++|++++|+.+..
T Consensus 263 -~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 263 -LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred -CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 01112233567789999999999999999999999987643
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=333.18 Aligned_cols=251 Identities=19% Similarity=0.240 Sum_probs=194.8
Q ss_pred hhhhccCCCCCceEEEeC-----CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-----~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 765 (955)
..+.||+|+||.||++.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+. ...++||
T Consensus 35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEE
Confidence 778899999999988753 378999999997643 2356788999999999999999999999874 6789999
Q ss_pred eecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--
Q 002186 766 DYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-- 842 (955)
||+++|+|.+++.. ..++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 115 e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 191 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 191 (318)
T ss_dssp CCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEE
T ss_pred ecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccccccccc
Confidence 99999999999976 568999999999999999999999 999999999999999999999999999876543221
Q ss_pred ---CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCC----CCcccc----ccccccccccccCC
Q 002186 843 ---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL----QNKPID----GLLGEMYNENEVGS 911 (955)
Q Consensus 843 ---~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~----~~~~~~----~~~~~~~~~~~~~~ 911 (955)
....++..|.+||......++.++||||+||++|||+||+.|+...... ..+... ....+.......
T Consensus 192 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 269 (318)
T 3lxp_A 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER-- 269 (318)
T ss_dssp EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC--
T ss_pred ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccC--
Confidence 1122344578899988888899999999999999999999987632100 000000 000111111100
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+........+.+++.+||+.||++|||++|+++.|+.+
T Consensus 270 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 308 (318)
T 3lxp_A 270 LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308 (318)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 011122335678899999999999999999999999876
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=329.31 Aligned_cols=245 Identities=18% Similarity=0.228 Sum_probs=195.4
Q ss_pred HhhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEc--------
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-------- 757 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-------- 757 (955)
+...|. ..+.||+|+||.||+|... +|+.||||+++... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 9 FGMDFK--EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHEE--EEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hccccc--eeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 345566 8889999999999999965 89999999997543 346688999999999999999999864
Q ss_pred --------CCeeEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC
Q 002186 758 --------RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825 (955)
Q Consensus 758 --------~~~~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~ 825 (955)
.+..++||||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTE
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCC
Confidence 3458999999999999999964 468889999999999999999999 9999999999999999999
Q ss_pred ceECcccccccccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccc
Q 002186 826 PHLAEFGFKYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 826 ~ki~DfGl~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
+||+|||+++........ ...+...|.+||...+..++.++|||||||++|||+||+.|+..... ......
T Consensus 161 ~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--------~~~~~~ 232 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK--------FFTDLR 232 (284)
T ss_dssp EEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH--------HHHHHH
T ss_pred EEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH--------HHHHhh
Confidence 999999998765433221 22245568899999888899999999999999999999887642110 000111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
... . ... ....+.+++.+||+.||++|||+.|+++.|..++..
T Consensus 233 ~~~-~--~~~---~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 233 DGI-I--SDI---FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp TTC-C--CTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred ccc-c--ccc---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 111 1 111 123466888999999999999999999999877543
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=345.05 Aligned_cols=251 Identities=15% Similarity=0.134 Sum_probs=187.7
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---------hHHHHHHHHHHHhccCCCCceeEeEE
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGF 754 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~ 754 (955)
..+.+.|. ..+.||+|+||+||+|.. .+|+.||||++..... ....+.+|++++++++|||||+++++
T Consensus 131 ~~~~~~y~--~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 208 (419)
T 3i6u_A 131 KALRDEYI--MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 208 (419)
T ss_dssp HHHHTTEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEE
T ss_pred hhhhccEE--EEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 44556676 888999999999999984 5789999999975321 12247789999999999999999999
Q ss_pred EEcCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC---CCceEC
Q 002186 755 CYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLA 829 (955)
Q Consensus 755 ~~~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~ 829 (955)
+.. +..++|||||++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+|||++.+ ..+||+
T Consensus 209 ~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 209 FDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp EES-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred Eec-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 865 557999999999999999865 568899999999999999999999 99999999999999754 459999
Q ss_pred cccccccccccCC-CCcccccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccc
Q 002186 830 EFGFKYLTQLADG-SFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 830 DfGl~~~~~~~~~-~~~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
|||+++....... ....++..|.+||+.. ...++.++||||+||++|||+||+.||........ ... .+..
T Consensus 285 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~~---~i~~ 359 (419)
T 3i6u_A 285 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKD---QITS 359 (419)
T ss_dssp CSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HHH---HHHT
T ss_pred ecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HHH---HHhc
Confidence 9999976543221 1223566688899874 35678899999999999999999999874332111 000 1100
Q ss_pred ccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
......+.........+.+++.+||+.||++|||++|++++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 360 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00000001111234567899999999999999999999874
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=338.42 Aligned_cols=252 Identities=16% Similarity=0.142 Sum_probs=189.5
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCC-
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH- 759 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~- 759 (955)
.+.++|. ..+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|++.+++++|||||++++++...+
T Consensus 9 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 86 (311)
T 3ork_A 9 HLSDRYE--LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP 86 (311)
T ss_dssp EETTTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET
T ss_pred eecCcEE--EEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC
Confidence 3345566 888999999999999994 6899999999975422 2456789999999999999999999987654
Q ss_pred ---eeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccc
Q 002186 760 ---QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 760 ---~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~ 834 (955)
..|+||||+++|+|.++++. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 87 AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp TEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred CCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 34999999999999999975 578899999999999999999999 9999999999999999999999999998
Q ss_pred ccccccCCC-----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 835 YLTQLADGS-----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 835 ~~~~~~~~~-----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
+........ ...++..|.+||...+..++.++||||+||++|||+||+.||....... ...........
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~~~ 237 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------VAYQHVREDPI 237 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCCCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhcCCCC
Confidence 754332211 1124566889999988889999999999999999999999986432110 00011111100
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHH-HHhh
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEAL-KLLS 948 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~-~~L~ 948 (955)
...........++.+++.+||+.||++||++.+++ ..+.
T Consensus 238 ~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 277 (311)
T 3ork_A 238 PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277 (311)
T ss_dssp CHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred CcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence 00000011235677899999999999999776665 3443
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=334.88 Aligned_cols=241 Identities=16% Similarity=0.131 Sum_probs=192.9
Q ss_pred hcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|+.. +|+.||||+++... ...+.+..|.+++..+ +||||+++++++.+.+..|+
T Consensus 21 ~y~--~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 21 DFN--FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp TEE--EEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred HcE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 355 7889999999999999964 68999999997532 2345677889999887 79999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 9999999999999975 678889999999999999999999 99999999999999999999999999987532221
Q ss_pred --CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 --GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 --~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
.....+++.|.+||+.....++.++||||+||++|||+||+.||...... .....+.... ...+. ...
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~s 245 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHN-VAYPK---SMS 245 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSC
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH------HHHHHHHhCC-CCCCC---CCC
Confidence 11223567788999998888999999999999999999999998743211 1111111111 11111 123
Q ss_pred HHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPS-----MEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt-----~~ev~~ 945 (955)
.++.+++.+||+.||++||+ ++|+.+
T Consensus 246 ~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 246 KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 45778899999999999995 577764
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=349.79 Aligned_cols=241 Identities=13% Similarity=0.072 Sum_probs=186.4
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|. ..+|+.||||+++... .....+.+|++++++++|||||+++++|.+.+..++|
T Consensus 149 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 149 EFE--YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred HcE--EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 355 78899999999999998 4689999999997532 2244567889999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||++|+|.+++.. ..++.....++.|+++||+|||+ . +|+||||||+|||++.++.+||+|||+++......
T Consensus 227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 999999999999965 56888999999999999999998 7 99999999999999999999999999987532221
Q ss_pred C--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....++..|.+||+..+..++.++|||||||++|||+||+.||...... .....+.... ...+. ...
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~~ 373 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------KLFELILMEE-IRFPR---TLG 373 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSC
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH------HHHHHHHhCC-CCCCc---cCC
Confidence 1 1223566789999998889999999999999999999999998643211 1111111111 11111 122
Q ss_pred HHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRP-----SMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RP-----t~~ev~~ 945 (955)
..+.+++.+||+.||++|| +++|+++
T Consensus 374 ~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 374 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 4577889999999999999 9999986
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=346.71 Aligned_cols=246 Identities=17% Similarity=0.099 Sum_probs=192.6
Q ss_pred hcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||+||+|+.. +|+.||||+++.... ..+.+.+|+.++.+++|||||+++++|.+++..|+|
T Consensus 75 ~y~--~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 75 DFE--ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred heE--EEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 455 7889999999999999964 688999999975321 233478899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 765 YDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||++|+|.+++.+ ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 153 ~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229 (437)
T ss_dssp ECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence 999999999999975 568888999999999999999999 99999999999999999999999999987553322
Q ss_pred C---CCcccccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccc-ccCCC
Q 002186 842 G---SFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSS 912 (955)
Q Consensus 842 ~---~~~~~~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 912 (955)
. ....++++|.+||+.. ...++.++|||||||++|||+||+.||....... ....+.... ....+
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~------~~~~i~~~~~~~~~p 303 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHKERFQFP 303 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHCCCC
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH------HHHhhhhccccccCC
Confidence 1 1223667788999886 4568889999999999999999999997432111 111111100 00001
Q ss_pred CchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSD--RPSMEEALKL 946 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~--RPt~~ev~~~ 946 (955)
.........+.+++.+|+..+|++ ||+++|++++
T Consensus 304 ~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 304 TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 111112345678888899888888 9999999864
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=336.58 Aligned_cols=241 Identities=20% Similarity=0.253 Sum_probs=190.5
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+.|. ..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++|||||+++++|.+++..++
T Consensus 54 ~~y~--~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 131 (348)
T 1u5q_A 54 KLFS--DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL 131 (348)
T ss_dssp HHEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhee--eeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence 3455 778899999999999984 689999999997532 124568899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||++ |++.+.+.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 132 v~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 132 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp EEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred EEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 999997 788888753 578999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCCcccccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccc-cccCCCCchH
Q 002186 841 DGSFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE-NEVGSSSSLQ 916 (955)
Q Consensus 841 ~~~~~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 916 (955)
. ...++..|.+||+.. ...++.++|||||||++|||+||+.||....... ....+... .+.....
T Consensus 208 ~--~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~--- 276 (348)
T 1u5q_A 208 N--SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQNESPALQSG--- 276 (348)
T ss_dssp C--CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSCCCCCCCT---
T ss_pred C--cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHhcCCCCCCCC---
Confidence 2 223556688899874 4568889999999999999999999986432111 00011110 0000011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.....+.+++.+||+.||++|||++|++++
T Consensus 277 ~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 277 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 122456788899999999999999999864
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-36 Score=327.78 Aligned_cols=248 Identities=20% Similarity=0.229 Sum_probs=191.1
Q ss_pred cchhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEc-CCeeEEEE
Q 002186 693 STECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLY 765 (955)
Q Consensus 693 ~~~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ 765 (955)
+...+.||+|+||.||+|+.. ++..||||.++... ...+.+.+|++++++++|||||+++++|.+ ++..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 337788999999999999853 23468999987532 235678899999999999999999999754 56789999
Q ss_pred eecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 766 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
||+++|+|.++++. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 183 (298)
T 3f66_A 107 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183 (298)
T ss_dssp ECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred eCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccccch
Confidence 99999999999965 357888999999999999999999 999999999999999999999999999875432211
Q ss_pred ------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 843 ------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 843 ------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
....++..|.+||...+..++.++||||+||++|||+||+.|+........... ..........+.
T Consensus 184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--- 255 (298)
T 3f66_A 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV-----YLLQGRRLLQPE--- 255 (298)
T ss_dssp CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHH-----HHHTTCCCCCCT---
T ss_pred hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHH-----HHhcCCCCCCCc---
Confidence 111233457889998888899999999999999999997666554332221110 111111010011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.....+.+++.+||+.||++|||++|+++.|+++.
T Consensus 256 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 256 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11245778899999999999999999999998763
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-36 Score=328.63 Aligned_cols=246 Identities=18% Similarity=0.165 Sum_probs=186.3
Q ss_pred hhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhc-cCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 697 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++.+ .+|||||++++++.+++..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 6799999999999994 589999999997543 235678899999988 5799999999999999999999999999999
Q ss_pred hHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC---ceECcccccccccccCC------
Q 002186 774 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFGFKYLTQLADG------ 842 (955)
Q Consensus 774 ~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~DfGl~~~~~~~~~------ 842 (955)
.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++.......
T Consensus 99 ~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 175 (316)
T 2ac3_A 99 LSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175 (316)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccc
Confidence 999975 568888999999999999999999 9999999999999998766 99999999865432111
Q ss_pred ---CCcccccccCchhhhhc-----cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC-Cccccc--------ccccccc
Q 002186 843 ---SFPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ-NKPIDG--------LLGEMYN 905 (955)
Q Consensus 843 ---~~~~~~~~~~~~e~~~~-----~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~-~~~~~~--------~~~~~~~ 905 (955)
....++..|.+||.... ..++.++||||+||++|||+||+.||....... .|.... ....+..
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 255 (316)
T 2ac3_A 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255 (316)
T ss_dssp ------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHH
T ss_pred cccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhc
Confidence 11124556888888764 457889999999999999999999997543211 111110 0111111
Q ss_pred ccccCCCC-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 906 ENEVGSSS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 906 ~~~~~~~~-~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.. ...+. ........+.+++.+||+.||++|||++|++++
T Consensus 256 ~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 256 GK-YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cC-cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11 10000 001123567899999999999999999999874
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-36 Score=334.91 Aligned_cols=239 Identities=16% Similarity=0.149 Sum_probs=185.9
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCC--CCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRH--KNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++| ||||++++++.+++..++||| +.
T Consensus 13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~ 91 (343)
T 3dbq_A 13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 91 (343)
T ss_dssp EEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CC
T ss_pred EEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CC
Confidence 7889999999999999999999999999975332 34678899999999987 999999999999999999999 56
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC----
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---- 843 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~---- 843 (955)
+|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++........
T Consensus 92 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~ 167 (343)
T 3dbq_A 92 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKD 167 (343)
T ss_dssp SEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----------
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCC
Confidence 7899999976 467888999999999999999999 999999999999997 578999999999765432211
Q ss_pred CcccccccCchhhhhc-----------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc-CC
Q 002186 844 FPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV-GS 911 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~-----------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 911 (955)
...++++|.+||+... ..++.++|||||||++|||+||+.||....... .......++... ..
T Consensus 168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~ 242 (343)
T 3dbq_A 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-----SKLHAIIDPNHEIEF 242 (343)
T ss_dssp --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-----HHHHHHHCTTSCCCC
T ss_pred CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH-----HHHHHHhcCCcccCC
Confidence 1235667889998764 568889999999999999999999986422110 011111111100 01
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.. ....+.+++.+||+.||++|||++|++++
T Consensus 243 ~~~---~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 243 PDI---PEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccc---CCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 111 12356788999999999999999999864
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=339.99 Aligned_cols=250 Identities=12% Similarity=0.068 Sum_probs=189.3
Q ss_pred hcccchhhhccCCCCCceEEEeCCC------CcEEEEEEeecccch------------HHHHHHHHHHHhccCCCCceeE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPT------GITVSVKKIEWGATR------------IKIVSEFITRIGTVRHKNLIRL 751 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~------g~~vAvK~~~~~~~~------------~~~~~~e~~~l~~l~H~niv~l 751 (955)
.|. ..+.||+|+||.||+|...+ ++.||||++...... ...+.+|+..+++++|||||++
T Consensus 36 ~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 36 AWK--VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp EEE--EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred eEE--EEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 455 88899999999999998643 578999998754311 1123455667788899999999
Q ss_pred eEEEEcC----CeeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC--C
Q 002186 752 LGFCYNR----HQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--E 822 (955)
Q Consensus 752 ~g~~~~~----~~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~--~ 822 (955)
++++... ...++||||+ +|+|.+++.. .+++.++..|+.|++.||+|||+. +|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCC
Confidence 9999764 4589999999 9999999975 468999999999999999999999 999999999999999 8
Q ss_pred CCCceECcccccccccccCC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC
Q 002186 823 NMEPHLAEFGFKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 893 (955)
Q Consensus 823 ~~~~ki~DfGl~~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~ 893 (955)
++.+||+|||+++....... ....++..|.+||+..+..++.++|||||||++|||+||+.||........
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 89999999999976433211 111255668899999888899999999999999999999999974222111
Q ss_pred cccc------ccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 894 KPID------GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 894 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.... .......++. .. . .....++.+++..||+.||++||+++++++.|+.+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~-~~-~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 270 YVRDSKIRYRENIASLMDKC-FP-A---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp HHHHHHHHHHHCHHHHHHHH-SC-T---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHh-cc-c---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 1000 0000111100 00 0 01134577888999999999999999999988754
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-36 Score=323.90 Aligned_cols=246 Identities=18% Similarity=0.176 Sum_probs=193.3
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc-------hHHHHHHHHHHHhccCCCCceeEeEEEEcCCe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 760 (955)
+.|. ..+.||+|+||.||+|... +|+.||||.++.... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 5 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T 3bhy_A 5 DHYE--MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD 82 (283)
T ss_dssp HHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhh--hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence 3465 7789999999999999965 799999999975321 25678899999999999999999999999999
Q ss_pred eEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC----CceECccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEFGFK 834 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~----~~ki~DfGl~ 834 (955)
.++||||+++++|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999999965 578999999999999999999999 999999999999998877 7999999998
Q ss_pred ccccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 835 YLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 835 ~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
......... ...+...|.+||......++.++|||||||++|||+||+.||....... ....+..........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~ 233 (283)
T 3bhy_A 160 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE------TLTNISAVNYDFDEE 233 (283)
T ss_dssp EECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTCCCCCHH
T ss_pred eeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH------HHHHhHhcccCCcch
Confidence 765332211 1224556888999888889999999999999999999999986432110 011110000000000
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 234 YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 01122345778999999999999999999986
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=346.57 Aligned_cols=250 Identities=16% Similarity=0.171 Sum_probs=197.6
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCe
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 760 (955)
..+.+.|. ..+.||+|+||+||+|+. .+|+.||||++... ....+.+.+|++++++++|||||++++++.+.+.
T Consensus 18 g~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 95 (486)
T 3mwu_A 18 GTFAERYN--IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS 95 (486)
T ss_dssp CHHHHHEE--EEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred CChhcceE--EeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCE
Confidence 34556777 888999999999999995 48999999999653 2345678899999999999999999999999999
Q ss_pred eEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC---CCCCceECcccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD---ENMEPHLAEFGFKY 835 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~---~~~~~ki~DfGl~~ 835 (955)
.++|||||++|+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 9999999999999998864 568889999999999999999999 999999999999995 45679999999987
Q ss_pred cccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCc
Q 002186 836 LTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 914 (955)
Q Consensus 836 ~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (955)
....... ....++++|.+||+..+ .++.++||||+||++|||+||+.||...... .....+.........+.
T Consensus 173 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~ 245 (486)
T 3mwu_A 173 CFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY------DILKRVETGKYAFDLPQ 245 (486)
T ss_dssp TBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCSCSGG
T ss_pred ECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCCCCCcc
Confidence 6543322 12236677889998875 5889999999999999999999998743211 01111111110111112
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 915 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 915 ~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+......+.+++.+||+.||++|||+.|++++
T Consensus 246 ~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 22334567799999999999999999999974
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=343.41 Aligned_cols=231 Identities=17% Similarity=0.140 Sum_probs=180.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecc----cchHHHHHHHH---HHHhccCCCCceeEe-------EEEEcCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFI---TRIGTVRHKNLIRLL-------GFCYNRH 759 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~----~~~~~~~~~e~---~~l~~l~H~niv~l~-------g~~~~~~ 759 (955)
..+.||+|+||+||+|+. .+|+.||||++... ....+.+.+|+ +.+++++|||||+++ +++.+++
T Consensus 77 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 156 (377)
T 3byv_A 77 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 156 (377)
T ss_dssp EEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTT
T ss_pred EcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccC
Confidence 678999999999999995 67999999999742 22356788999 556677899999998 7776554
Q ss_pred e-----------------eEEEEeecCCCChhHHhhc--CC-------CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 002186 760 Q-----------------AYLLYDYLPNGNLSEKIRT--KR-------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 813 (955)
Q Consensus 760 ~-----------------~~lv~ey~~~gsL~~~l~~--~~-------~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdl 813 (955)
. .|+||||+ +|+|.+++.. .. ++..+..|+.|+++||+|||+. +|+||||
T Consensus 157 ~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDi 232 (377)
T 3byv_A 157 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 232 (377)
T ss_dssp SCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 2 79999999 6899999975 22 2577788999999999999999 9999999
Q ss_pred CCCCeeeCCCCCceECcccccccccccCCCCcccccccCchhhhhcc-----------CCcccccchhHHHHHHHHHhCC
Q 002186 814 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-----------KEEMYMDVYGFGEIILEILTNG 882 (955)
Q Consensus 814 k~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~-----------~~~~~~DV~S~Gvvl~Elltg~ 882 (955)
||+|||++.++.+||+|||+++....... ...+ ..|.+||+.... .++.++|||||||++|||+||+
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~~~~-~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~ 310 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGARVV-SSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTCEEE-CCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CHHHEEEcCCCCEEEEechhheecCCccc-CCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCC
Confidence 99999999999999999999875432211 2224 668899998877 7899999999999999999999
Q ss_pred CCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 883 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 883 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.||........ ........ . .....+.+++.+||+.||++|||+.|+++
T Consensus 311 ~Pf~~~~~~~~------~~~~~~~~-----~---~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 311 LPITKDAALGG------SEWIFRSC-----K---NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp CCC------CC------SGGGGSSC-----C---CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred CCCcccccccc------hhhhhhhc-----c---CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99874332111 11111110 1 11245778899999999999999999985
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-36 Score=337.02 Aligned_cols=239 Identities=16% Similarity=0.141 Sum_probs=186.5
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccC--CCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVR--HKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|...+|+.||||++.... ...+.+.+|++++++++ |||||++++++..++..|+||| +.
T Consensus 60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~ 138 (390)
T 2zmd_A 60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 138 (390)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CC
T ss_pred EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cC
Confidence 788999999999999998889999999997532 23567889999999997 5999999999999999999999 56
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC----C
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----S 843 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~----~ 843 (955)
+|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++....... .
T Consensus 139 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~ 214 (390)
T 2zmd_A 139 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKD 214 (390)
T ss_dssp SEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------C
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCC
Confidence 8899999975 457888899999999999999998 999999999999996 57899999999976543221 1
Q ss_pred CcccccccCchhhhhc-----------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc-CC
Q 002186 844 FPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV-GS 911 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~-----------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 911 (955)
...++++|.+||+... ..++.++|||||||++|||+||+.||....... ..+..+.++... ..
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-----~~~~~~~~~~~~~~~ 289 (390)
T 2zmd_A 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-----SKLHAIIDPNHEIEF 289 (390)
T ss_dssp CSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-----HHHHHHHCTTSCCCC
T ss_pred CCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH-----HHHHHHhCccccCCC
Confidence 2235677889998764 368889999999999999999999986432110 111112211101 00
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+... ...+.+++.+||+.||++|||++|++++
T Consensus 290 ~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 290 PDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Cccc---hHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111 2457788999999999999999999863
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=362.39 Aligned_cols=241 Identities=16% Similarity=0.196 Sum_probs=190.3
Q ss_pred hhccCCCCCceEEEeC---CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 697 EEAARPQSAAGCKAVL---PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~---~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++++++|||||+++++|.. +..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999964 4678999999976432 35778999999999999999999999975 457899999999
Q ss_pred CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC----
Q 002186 771 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---- 844 (955)
Q Consensus 771 gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---- 844 (955)
|+|.++++. ..++.++..|+.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 999999975 468999999999999999999999 99999999999999999999999999997654322111
Q ss_pred -cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 845 -PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 845 -~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
..++..|.+||+.....++.++|||||||++|||+| |+.||....... ....+........+ .....++
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~i~~~~~~~~p---~~~~~~l 601 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------VTAMLEKGERMGCP---AGCPREM 601 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCC---TTCCHHH
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCC---CCCCHHH
Confidence 112344788999988899999999999999999999 998886432110 00111111101111 1233567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+++..||+.||++|||+++|+++|+.+
T Consensus 602 ~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 602 YDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 7899999999999999999999999864
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-36 Score=338.26 Aligned_cols=252 Identities=17% Similarity=0.163 Sum_probs=192.4
Q ss_pred hcccchhhhccCC--CCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARP--QSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g--~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+|. ..+.||+| +||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..++
T Consensus 26 ~y~--~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 26 CYE--LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GEE--EEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cEE--EEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 455 88899999 9999999995 489999999997643 234567889999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
|||||++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 9999999999999964 468888999999999999999999 999999999999999999999999998754321
Q ss_pred cC---------CCCcccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc--cccccccccc
Q 002186 840 AD---------GSFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI--DGLLGEMYNE 906 (955)
Q Consensus 840 ~~---------~~~~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~--~~~~~~~~~~ 906 (955)
.. .....++..|.+||.... ..++.++||||+||++|||+||+.||........... ........+.
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 11 111234555788898876 5789999999999999999999999975332211000 0000000000
Q ss_pred cc----------------------------------cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 907 NE----------------------------------VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 907 ~~----------------------------------~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.. ....+........+.+++.+||+.||++|||++|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00 00000111223568899999999999999999999864
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-36 Score=337.05 Aligned_cols=238 Identities=16% Similarity=0.106 Sum_probs=183.1
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHH-HhccCCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITR-IGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|..+ ++.++|||||++++++.+.+..|+
T Consensus 39 ~y~--~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 39 DFH--FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GEE--EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred heE--EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 366 888999999999999995 4789999999976432 23344555665 577899999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+++|+|.+++.+ ..++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999999999975 467888889999999999999999 99999999999999999999999999987533222
Q ss_pred --CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 --GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 --~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
.....+++.|.+||+..+..++.++||||+||++|||+||+.||..... ......+.... ....+. ..
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~~-~~~~~~---~~ 263 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT------AEMYDNILNKP-LQLKPN---IT 263 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH------HHHHHHHHHSC-CCCCSS---SC
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHhcc-cCCCCC---CC
Confidence 1222356778999999888899999999999999999999999864321 11111121111 111111 22
Q ss_pred HHHHHHHHHccCCCCCCCCCHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEE 942 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~e 942 (955)
..+.+++.+||+.||++||++.+
T Consensus 264 ~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 264 NSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp HHHHHHHHHHTCSSGGGSTTTTT
T ss_pred HHHHHHHHHHcccCHHhCCCCCC
Confidence 45678889999999999999853
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-36 Score=328.02 Aligned_cols=249 Identities=18% Similarity=0.188 Sum_probs=195.0
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.+.+.|. ..+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 6 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 6 NIRKTFI--FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp CHHHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred chhccce--eeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 3445676 788999999999999995 4899999999975432 34568899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee---CCCCCceECccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DfGl~~~~~ 838 (955)
||||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++...
T Consensus 84 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 84 VMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp EECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred EEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 9999999999999864 568888999999999999999999 99999999999999 788999999999987543
Q ss_pred ccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 839 LADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 839 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
........++..|.+||......++.++||||+||++|||+||+.||...... .....+.........+.....
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~~~~~ 234 (304)
T 2jam_A 161 NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES------KLFEKIKEGYYEFESPFWDDI 234 (304)
T ss_dssp CBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHCCCCCCTTTTTTS
T ss_pred CCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCCCCCCccccccC
Confidence 32222222456688999988888999999999999999999999998643211 001111111000001111223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 235 SESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp CHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 356778999999999999999999986
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=343.70 Aligned_cols=245 Identities=14% Similarity=0.077 Sum_probs=191.8
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++.+++|||||++++++.+++..|+|
T Consensus 62 ~f~--~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 139 (412)
T 2vd5_A 62 DFE--ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLV 139 (412)
T ss_dssp GEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hEE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 455 788999999999999996 589999999997532 1234578899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 765 YDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||++|+|.+++.+ ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 140 mE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~ 216 (412)
T 2vd5_A 140 MEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG 216 (412)
T ss_dssp ECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCCC
Confidence 999999999999975 568888899999999999999998 99999999999999999999999999997654332
Q ss_pred C---CCcccccccCchhhhh-------ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccc-ccC
Q 002186 842 G---SFPAKIAWTESGEFYN-------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVG 910 (955)
Q Consensus 842 ~---~~~~~~~~~~~~e~~~-------~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 910 (955)
. ....+++.|.+||+.. ...++.++|||||||++|||+||+.||....... ....+.... ...
T Consensus 217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~i~~~~~~~~ 290 (412)
T 2vd5_A 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE------TYGKIVHYKEHLS 290 (412)
T ss_dssp CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHCC
T ss_pred ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH------HHHHHHhcccCcC
Confidence 1 1223567788999886 3467899999999999999999999997532111 111111100 000
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDR---PSMEEALKL 946 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~R---Pt~~ev~~~ 946 (955)
.+........++.+++.+||. +|++| |+++|++++
T Consensus 291 ~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 291 LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp CC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 011111223567788999999 99998 699999763
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=352.06 Aligned_cols=245 Identities=15% Similarity=0.106 Sum_probs=195.6
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
|. ..+.||+|+||.||+|.. .+|+.||||++.... .....+.+|++++++++|||||++++++.+.+..|+||
T Consensus 186 f~--~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 186 FR--QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp EE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 55 778899999999999985 589999999997532 23456788999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 766 DYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 766 ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
|||++|+|.+++.. ..++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 264 Ey~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp CCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 99999999999975 268889999999999999999999 99999999999999999999999999997654322
Q ss_pred C-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 842 G-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 842 ~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
. ....+++.|.+||+..+..++.++||||+||++|||+||+.||........ .......+. ..+...+ .....
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~~~i~~~i~-~~~~~~p---~~~s~ 414 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REEVERLVK-EVPEEYS---ERFSP 414 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--HHHHHHHHH-HCCCCCC---TTSCH
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--HHHHHHHhh-cccccCC---ccCCH
Confidence 2 122356778999999888899999999999999999999999975332110 000111111 1101111 12234
Q ss_pred HHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002186 921 LVLDVALLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
.+.+++.+||+.||++|| +++||+++
T Consensus 415 ~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred HHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 577889999999999999 78888753
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=336.84 Aligned_cols=192 Identities=16% Similarity=0.180 Sum_probs=167.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccC-----CCCceeEeEEEEcCCeeE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----HKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~g~~~~~~~~~ 762 (955)
+.|. ..+.||+|+||.||+|+. .+|+.||||+++......+.+..|++++++++ |||||++++++...+..+
T Consensus 35 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~ 112 (360)
T 3llt_A 35 NAFL--VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC 112 (360)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred CEEE--EEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence 4466 888999999999999995 58999999999765555667778899998886 999999999999999999
Q ss_pred EEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC----------------
Q 002186 763 LLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---------------- 822 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---------------- 822 (955)
+||||+ +|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+|||++.
T Consensus 113 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~ 188 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188 (360)
T ss_dssp EEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTTC
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhccccc
Confidence 999999 8999999975 367888999999999999999999 9999999999999985
Q ss_pred ---------CCCceECcccccccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCC
Q 002186 823 ---------NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 887 (955)
Q Consensus 823 ---------~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~ 887 (955)
++.+||+|||+++........ ..++..|.+||+..+..++.++||||+||++|||+||+.||..
T Consensus 189 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 189 KKIQIYRTKSTGIKLIDFGCATFKSDYHGS-IINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp CEEEEEEESCCCEEECCCTTCEETTSCCCS-CCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccCCCCEEEEeccCceecCCCCcC-ccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 788999999999764433222 2345668899999888999999999999999999999999874
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-36 Score=332.77 Aligned_cols=244 Identities=19% Similarity=0.261 Sum_probs=189.0
Q ss_pred hhhhccCCCCCceEEEeCCC-----CcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVLPT-----GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~-----g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||.||+|.... +..||||+++... .....+.+|++++++++|||||++++++.+.+..++||||
T Consensus 48 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeC
Confidence 56889999999999998532 3469999997543 2345688999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 128 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 204 (333)
T 1mqb_A 128 MENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 204 (333)
T ss_dssp CTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccccccc
Confidence 999999999975 468899999999999999999999 99999999999999999999999999987654322111
Q ss_pred -----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 845 -----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 845 -----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
...+..|.+||......++.++|||||||++|||+| |+.||...... .....+.+....... ...
T Consensus 205 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~~~~~~~~~~~~~~~---~~~ 275 (333)
T 1mqb_A 205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH------EVMKAINDGFRLPTP---MDC 275 (333)
T ss_dssp ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTTCCCCCC---TTC
T ss_pred cccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH------HHHHHHHCCCcCCCc---ccC
Confidence 112345788999888889999999999999999999 88888643210 111111111101111 122
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
...+.+++.+||+.||++||+++|+++.|+.+
T Consensus 276 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 276 PSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp BHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 34577889999999999999999999998765
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=341.10 Aligned_cols=255 Identities=22% Similarity=0.288 Sum_probs=185.0
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc---cchHHHHHHHHHHHhccC-CCCceeEeEEEEcCC-
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRH- 759 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~- 759 (955)
.+.++|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.++.+++ |||||++++++..++
T Consensus 6 ~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 6 HVLRKYE--LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp HHHTTEE--EEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred cccCceE--EEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence 4456676 888999999999999984 68999999998643 223556778999999997 999999999998654
Q ss_pred -eeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 760 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 760 -~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
..|+|||||+ |+|.++++. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred CEEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 6899999997 699999875 568888899999999999999999 9999999999999999999999999998754
Q ss_pred cccC-----------------------CCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC
Q 002186 838 QLAD-----------------------GSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 893 (955)
Q Consensus 838 ~~~~-----------------------~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~ 893 (955)
.... .....++++|.+||+..+ ..++.++||||+||++|||+||+.||.+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~ 239 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 2210 011235677899998865 6789999999999999999999999975432110
Q ss_pred cccc-cccc--------ccccc---------------cccCCCCchH-------------HHHHHHHHHHHHccCCCCCC
Q 002186 894 KPID-GLLG--------EMYNE---------------NEVGSSSSLQ-------------DEIKLVLDVALLCTRSTPSD 936 (955)
Q Consensus 894 ~~~~-~~~~--------~~~~~---------------~~~~~~~~~~-------------~~~~~~~~l~~~Cl~~dp~~ 936 (955)
.... .... ....+ .........+ .....+.+++.+||+.||++
T Consensus 240 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~ 319 (388)
T 3oz6_A 240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK 319 (388)
T ss_dssp HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence 0000 0000 00000 0000000000 12346789999999999999
Q ss_pred CCCHHHHHHH
Q 002186 937 RPSMEEALKL 946 (955)
Q Consensus 937 RPt~~ev~~~ 946 (955)
|||++|++++
T Consensus 320 R~t~~e~l~H 329 (388)
T 3oz6_A 320 RISANDALKH 329 (388)
T ss_dssp SCCHHHHTTS
T ss_pred CCCHHHHhCC
Confidence 9999999875
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-36 Score=335.94 Aligned_cols=248 Identities=21% Similarity=0.251 Sum_probs=193.4
Q ss_pred hhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc---------hHHHHHHHHHHHhcc-CCCCceeEeEEEE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT---------RIKIVSEFITRIGTV-RHKNLIRLLGFCY 756 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~---------~~~~~~~e~~~l~~l-~H~niv~l~g~~~ 756 (955)
.+.|. ..+.||+|+||.||+|+.. +|+.||||+++.... ..+.+.+|+.+++++ +||||+++++++.
T Consensus 93 ~~~y~--~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 93 YQKYD--PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhcc--cceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 34455 7789999999999999964 899999999875321 134577899999998 7999999999999
Q ss_pred cCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccc
Q 002186 757 NRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 757 ~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~ 834 (955)
..+..++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFS 247 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCcc
Confidence 99999999999999999999975 578899999999999999999999 9999999999999999999999999998
Q ss_pred ccccccCC-CCcccccccCchhhhhc------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccc
Q 002186 835 YLTQLADG-SFPAKIAWTESGEFYNA------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN 907 (955)
Q Consensus 835 ~~~~~~~~-~~~~~~~~~~~~e~~~~------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (955)
........ ....++..|.+||+..+ ..++.++|||||||++|||+||+.||....... ....+....
T Consensus 248 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~------~~~~i~~~~ 321 (365)
T 2y7j_A 248 CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL------MLRMIMEGQ 321 (365)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTC
T ss_pred cccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCC
Confidence 76543222 12235566888898753 257889999999999999999999986432110 011111110
Q ss_pred ccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 908 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.....+.+......+.+++.+||+.||++|||++|+++.
T Consensus 322 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 322 YQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp CCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000000111223457789999999999999999999863
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=328.41 Aligned_cols=249 Identities=17% Similarity=0.226 Sum_probs=195.9
Q ss_pred hcccchhhhccCCCCCceEEEeCC------CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
+|. ..+.||+|+||.||+|+.. +++.||||++..... ....+.+|++++++++||||+++++++.+.+..
T Consensus 26 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 103 (322)
T 1p4o_A 26 KIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 103 (322)
T ss_dssp GEE--EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred hee--eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence 455 7889999999999999753 578899999975432 345688999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 762 YLLYDYLPNGNLSEKIRT------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
++||||+++|+|.++++. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEEC
Confidence 999999999999999964 247888999999999999999999 99999999999999999999999
Q ss_pred cccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccc
Q 002186 830 EFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 830 DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
|||+++........ ...+...|.+||...+..++.++||||+||++|||+| |+.|+..... . .....+.
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~-----~~~~~~~ 254 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-E-----QVLRFVM 254 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-H-----HHHHHHH
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-H-----HHHHHHH
Confidence 99998754332211 1123445788999888889999999999999999999 6777653221 0 0111111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
........ ......+.+++.+||+.||++|||++|+++.|+.+..
T Consensus 255 ~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 255 EGGLLDKP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp TTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred cCCcCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 11101001 1223457788999999999999999999999987643
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-36 Score=322.29 Aligned_cols=247 Identities=17% Similarity=0.171 Sum_probs=191.7
Q ss_pred hcccchhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|+.. ++..||||.++... ...+.+.+|++++++++||||+++++++.+ +..++
T Consensus 13 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 13 DVV--LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GEE--EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ceE--EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 355 7788999999999999842 34579999997542 245678899999999999999999999865 45689
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 9999999999999965 368889999999999999999999 9999999999999999999999999998765432
Q ss_pred CC---CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 841 DG---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 841 ~~---~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
.. ....+...|.+||......++.++|||||||++|||+| |+.||....... ...............
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~------~~~~~~~~~~~~~~~--- 237 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD------VIGVLEKGDRLPKPD--- 237 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG------HHHHHHHTCCCCCCT---
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH------HHHHHhcCCCCCCCC---
Confidence 21 11123345788999888889999999999999999999 999886332111 000110000011111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.....+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 238 LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 12245778899999999999999999999998753
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-36 Score=328.43 Aligned_cols=253 Identities=20% Similarity=0.245 Sum_probs=191.2
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
++|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 3 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 3 EKYE--KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp CCEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccce--EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 3455 778999999999999996 4699999999865332 245678899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp EECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 999999999998865 468888999999999999999999 999999999999999999999999999876543221
Q ss_pred C--CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc-ccccc-------------cccc
Q 002186 843 S--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DGLLG-------------EMYN 905 (955)
Q Consensus 843 ~--~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~-~~~~~-------------~~~~ 905 (955)
. ...++.+|.+||...+ ..++.++||||+||++|||+||+.||........... ..... ....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence 1 1235566888898765 5679999999999999999999999874332110000 00000 0000
Q ss_pred ccccCCCC---ch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 906 ENEVGSSS---SL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 906 ~~~~~~~~---~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+... .. +.....+.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000000 00 1223457889999999999999999999864
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=328.90 Aligned_cols=310 Identities=17% Similarity=0.144 Sum_probs=217.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+.+++.|++++|.++...+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..++++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 67899999999999876666678899999999999999988888999999999999999999988888899999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.++...+..|+++++|++|++++|.+++..|..+..+++|++|++++|.+++. .++.+++|++|++++|.+++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc
Confidence 999999865555578999999999999999887787888888888888888877653 24566777777777776653
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
+...++|++|++++|.+..... ...++|+.|++++|++++. ..+..+++|+.|++++|.+++..|..+..
T Consensus 201 -----~~~~~~L~~L~l~~n~l~~~~~---~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (390)
T 3o6n_A 201 -----LAIPIAVEELDASHNSINVVRG---PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVK 270 (390)
T ss_dssp -----EECCSSCSEEECCSSCCCEEEC---CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred -----cCCCCcceEEECCCCeeeeccc---cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccc
Confidence 2334566777777776665422 1235566666666666643 35556666666666666666555555656
Q ss_pred CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+++|+.|++++|++++ +|..+..+++|+.|++++|.+. .+|..+..+++|+.|+
T Consensus 271 l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-------------------------~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 271 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-------------------------HVERNQPQFDRLENLY 324 (390)
T ss_dssp CSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-------------------------CCGGGHHHHTTCSEEE
T ss_pred cccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-------------------------ecCccccccCcCCEEE
Confidence 6666666666665553 3333444455555555555443 1233344556666666
Q ss_pred CcCCccccccchhccCCCCCCEEECCCCcCCC
Q 002186 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTG 451 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 451 (955)
+++|+++.. | +..+++|+.|++++|++.+
T Consensus 325 L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 325 LDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 666666543 2 4556666666666666553
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-36 Score=336.48 Aligned_cols=249 Identities=16% Similarity=0.185 Sum_probs=193.3
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
|. ..+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|++++++++|||||++++++.+++..++||||
T Consensus 35 y~--~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 35 FE--KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp EE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ce--eeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 55 778899999999999995 489999999997642 2356788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCc
Q 002186 768 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP 845 (955)
Q Consensus 768 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~ 845 (955)
+++|+|.+++.. ..++.....++.|+++||+|||+.+ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 190 (360)
T 3eqc_A 113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190 (360)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCC
Confidence 999999999976 5688889999999999999999831 799999999999999999999999999865433322223
Q ss_pred ccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc-cc---------------------------
Q 002186 846 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-ID--------------------------- 897 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~-~~--------------------------- 897 (955)
.++..|.+||+..+..++.++|||||||++|||+||+.||.......... ..
T Consensus 191 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (360)
T 3eqc_A 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMD 270 (360)
T ss_dssp CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------------
T ss_pred CCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccC
Confidence 35566889999988889999999999999999999999986432100000 00
Q ss_pred --------ccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 898 --------GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 898 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
............... .......+.+++.+||+.||++|||++|+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 271 SRPPMAIFELLDYIVNEPPPKLP--SGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ---CCCHHHHHHHHHHSCCCCCC--TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCcccchhhhhHHhccCCCCCC--cccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000000000000000 0112345788999999999999999999986
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-36 Score=330.91 Aligned_cols=244 Identities=17% Similarity=0.233 Sum_probs=186.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcE----EEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGIT----VSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~----vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||.||+|.. .+|+. ||+|.+... ....+.+.+|++++++++|||||+++++|.+++ .++||||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~ 97 (327)
T 3lzb_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECC
T ss_pred EEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEe
Confidence 788999999999999984 45654 577776542 234677889999999999999999999998765 7899999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~ 174 (327)
T 3lzb_A 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174 (327)
T ss_dssp CSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----------
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccc
Confidence 999999999965 467888999999999999999999 99999999999999999999999999997653322111
Q ss_pred ----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 845 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 845 ----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
..++..|.+||...+..++.++||||+||++|||+| |+.||....... ....+. ......... ...
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~~~---~~~~~~~~~---~~~ 245 (327)
T 3lzb_A 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE---KGERLPQPP---ICT 245 (327)
T ss_dssp -----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHH---TTCCCCCCT---TBC
T ss_pred cccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHHHH---cCCCCCCCc---cCC
Confidence 112345788999888889999999999999999999 888886432111 000010 000011111 123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 246 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 246 IDVYMIMRKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 45778899999999999999999999998764
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=331.77 Aligned_cols=249 Identities=21% Similarity=0.221 Sum_probs=194.7
Q ss_pred hcccchhhhccCCCCCceEEEe------CCCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCC-
Q 002186 690 SFNSTECEEAARPQSAAGCKAV------LPTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH- 759 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~------~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~- 759 (955)
.|. ..+.||+|+||.||+|. ..+|+.||||+++.... ..+.+.+|++++.++ +|||||+++++|..++
T Consensus 28 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 28 RLK--LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GEE--EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hee--eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 355 77899999999999997 35688999999976432 345788999999999 7999999999998754
Q ss_pred eeEEEEeecCCCChhHHhhcC------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC
Q 002186 760 QAYLLYDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~~------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~ 821 (955)
..++||||+++|+|.+++... .++..+..++.|+++||+|||+. +|+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEEC
Confidence 589999999999999999753 56888899999999999999999 999999999999999
Q ss_pred CCCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccc
Q 002186 822 ENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPI 896 (955)
Q Consensus 822 ~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~ 896 (955)
.++.+||+|||+++........ ...++..|.+||......++.++||||+||++|||+| |+.||....... ...
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~ 261 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFC 261 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-HHH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH-HHH
Confidence 9999999999998755332221 1123445888999888889999999999999999999 888876432111 000
Q ss_pred cccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 897 DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
. ............ .....+.+++..||+.||++|||++|++++|+.+.
T Consensus 262 -~---~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 262 -R---RLKEGTRMRAPD---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp -H---HHHHTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -H---HhccCccCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0 010000010011 12245778889999999999999999999998753
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-36 Score=328.04 Aligned_cols=244 Identities=19% Similarity=0.252 Sum_probs=183.4
Q ss_pred hhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----eeE
Q 002186 695 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-----QAY 762 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~ 762 (955)
..+.||+|+||.||+|... +++.||||+++... ...+.+.+|++.+++++||||+++++++.+.+ ..+
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 7788999999999999743 46689999997532 23456889999999999999999999998754 359
Q ss_pred EEEeecCCCChhHHhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccc
Q 002186 763 LLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~ 834 (955)
+||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecCcc
Confidence 99999999999999842 468899999999999999999998 9999999999999999999999999998
Q ss_pred ccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccccccccc
Q 002186 835 YLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 835 ~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
+....... ....+...|.+||......++.++|||||||++|||+| |..|+....... ...........
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~~~~~ 268 (313)
T 3brb_A 195 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE------MYDYLLHGHRL 268 (313)
T ss_dssp ----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG------HHHHHHTTCCC
T ss_pred eecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHHcCCCC
Confidence 75433211 11123445778899888889999999999999999999 666765332111 11111111101
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.........+.+++.+||+.||++|||++|++++|+++
T Consensus 269 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l 306 (313)
T 3brb_A 269 ---KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306 (313)
T ss_dssp ---CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11112234677899999999999999999999999875
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-36 Score=331.78 Aligned_cols=247 Identities=23% Similarity=0.298 Sum_probs=192.4
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcE--EEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGIT--VSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~--vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|+. .+|.. ||||+++... ...+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 26 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 26 DIK--FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GCE--EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred Hcc--ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 355 778999999999999985 46665 4999987532 2345688999999999 89999999999999999999
Q ss_pred EEeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC
Q 002186 764 LYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~ 825 (955)
||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 9999999999999965 357888999999999999999999 9999999999999999999
Q ss_pred ceECcccccccccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccc
Q 002186 826 PHLAEFGFKYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 903 (955)
Q Consensus 826 ~ki~DfGl~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 903 (955)
+||+|||+++........ .......|.+||......++.++||||+||++|||+| |+.||...... .....+
T Consensus 181 ~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~~~~~~ 254 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------ELYEKL 254 (327)
T ss_dssp EEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHG
T ss_pred EEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH------HHHHHh
Confidence 999999998643322211 1123345788898888888999999999999999999 98888643211 011111
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 904 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
......... ......+.+++.+||+.||++|||++|+++.|+.+
T Consensus 255 ~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 298 (327)
T 1fvr_A 255 PQGYRLEKP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298 (327)
T ss_dssp GGTCCCCCC---TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hcCCCCCCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111001001 11234577899999999999999999999998865
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=346.80 Aligned_cols=248 Identities=17% Similarity=0.203 Sum_probs=191.9
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.+.+.|. ..+.||+|+||+||+|+. .+|..||||++.... ...+.+.+|++++++++|||||+++++|.+.+..
T Consensus 34 ~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 111 (494)
T 3lij_A 34 HLSEMYQ--RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNY 111 (494)
T ss_dssp CHHHHEE--EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred chhcCeE--EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence 3445576 788999999999999995 489999999997532 2356788999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC---CCceECccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYL 836 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~DfGl~~~ 836 (955)
++|||||++|+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+|||++.. +.+||+|||+++.
T Consensus 112 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 112 YLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 999999999999998865 568888999999999999999999 99999999999999764 5599999999876
Q ss_pred ccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 837 TQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 837 ~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
...... ....++++|.+||+.. ..++.++||||+||++|||+||+.||...... .....+.........+.+
T Consensus 189 ~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~~ 261 (494)
T 3lij_A 189 FENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ------EILRKVEKGKYTFDSPEW 261 (494)
T ss_dssp CBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCCCSGGG
T ss_pred CCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCCCCchhc
Confidence 543322 1223567788999876 46889999999999999999999998743211 011111111101011112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+.+++.+||+.||++|||++|+++
T Consensus 262 ~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 262 KNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 223456778999999999999999999985
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-36 Score=327.03 Aligned_cols=253 Identities=13% Similarity=0.077 Sum_probs=191.4
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 762 (955)
.+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++.+++++||||+++++++..++..+
T Consensus 33 ~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 33 FGPYR--LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp -CCEE--EEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred eccEE--EEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 34465 788999999999999995 4799999999975422 2467889999999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
+||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999999975 578899999999999999999999 9999999999999999999999999998654332
Q ss_pred CCC---CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 841 DGS---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 841 ~~~---~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
... ...+...|.+||......++.++|||||||++|||+||+.||...... ............. . .....
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~-~---~~~~~ 260 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---VMGAHINQAIPRP-S---TVRPG 260 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---HHHHHHHSCCCCG-G---GTSTT
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---HHHHHhccCCCCc-c---ccCCC
Confidence 211 122455678899888888899999999999999999999998643211 0000010100000 0 00112
Q ss_pred HHHHHHHHHHHccCCCCCCCC-CHHHHHHHhhccCC
Q 002186 918 EIKLVLDVALLCTRSTPSDRP-SMEEALKLLSGLKP 952 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RP-t~~ev~~~L~~~~~ 952 (955)
....+.+++.+||+.||++|| +++|+++.|+....
T Consensus 261 ~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 261 IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 234577888999999999999 99999999986543
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-36 Score=323.14 Aligned_cols=241 Identities=15% Similarity=0.163 Sum_probs=190.8
Q ss_pred hhccCCCCCceEEEeC---CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 697 EEAARPQSAAGCKAVL---PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~---~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..||+|+||.||+|+. .+++.||||+++... ...+.+.+|++++++++||||+++++++. .+..++||||+++|
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEEEEeCCCC
Confidence 3899999999999984 368899999997642 34567889999999999999999999994 45689999999999
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-----
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----- 843 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~----- 843 (955)
+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 95 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 171 (287)
T 1u59_A 95 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 171 (287)
T ss_dssp EHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCC
T ss_pred CHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccc
Confidence 99999964 468899999999999999999999 9999999999999999999999999998765332211
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...++..|.+||......++.++|||||||++|||+| |+.||....... ....+........+ ......+
T Consensus 172 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~i~~~~~~~~~---~~~~~~l 242 (287)
T 1u59_A 172 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGKRMECP---PECPPEL 242 (287)
T ss_dssp SSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH------HHHHHHTTCCCCCC---TTCCHHH
T ss_pred cccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHhcCCcCCCC---CCcCHHH
Confidence 1112345788898888888999999999999999999 998886432211 00011110001111 1223467
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+++..||+.||++||+++|++++|+.+
T Consensus 243 ~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 243 YALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 7889999999999999999999999865
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=347.39 Aligned_cols=311 Identities=17% Similarity=0.138 Sum_probs=242.1
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+..++.|++++|.+....+..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 67899999999999877777788999999999999999998888999999999999999999998888899999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++..+..|+++++|++|+|++|.+++..|..++.+++|++|++++|.+.+. .++.+++|++|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc
Confidence 999999976666789999999999999999988888888899999999988888764 25567778888888887764
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
+...++|+.|++++|.+....+.. .++|+.|+|++|.+++ +.++..+++|+.|++++|.+++..|..+..
T Consensus 207 -----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (597)
T 3oja_B 207 -----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVK 276 (597)
T ss_dssp -----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred -----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcC
Confidence 334456777888877776544322 2467777777777765 356667777777777777777666666777
Q ss_pred CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+++|+.|++++|.+++ +|..+..+++|+.|++++|.++ .+|..+..+++|+.|+
T Consensus 277 l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-------------------------~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 277 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-------------------------HVERNQPQFDRLENLY 330 (597)
T ss_dssp CSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-------------------------CCGGGHHHHTTCSEEE
T ss_pred ccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-------------------------ccCcccccCCCCCEEE
Confidence 7777777777776665 3444555666666666666554 2344566678888888
Q ss_pred CcCCccccccchhccCCCCCCEEECCCCcCCCC
Q 002186 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGG 452 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 452 (955)
|++|++++. | +..+++|+.|++++|.+.+.
T Consensus 331 L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 331 LDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 888888754 2 66778888888888887753
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=331.81 Aligned_cols=252 Identities=18% Similarity=0.263 Sum_probs=193.9
Q ss_pred hhhhccCCCCCceEEEe-----CCCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCC--eeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-----~~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~e 766 (955)
..+.||+|+||.||+|+ ..+|+.||||++.... ...+.+.+|++++++++|||||++++++...+ ..++|||
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEE
Confidence 77899999999999998 3579999999997543 33567889999999999999999999987654 7899999
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
|+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 125 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~ 201 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY 201 (326)
T ss_dssp CCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSE
T ss_pred CCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhccccccc
Confidence 9999999999975 368899999999999999999998 999999999999999999999999999876543221
Q ss_pred ----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCC---------CCCCcccccccccccccccc
Q 002186 843 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGS---------SLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 843 ----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~---------~~~~~~~~~~~~~~~~~~~~ 909 (955)
....+...|.+||......++.++|||||||++|||+||+.|+.... ..........+.+.......
T Consensus 202 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (326)
T 2w1i_A 202 YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 281 (326)
T ss_dssp EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC
T ss_pred cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCC
Confidence 11123344778898888888999999999999999999998875210 00000000000011111000
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+.......++.+++.+||+.||++|||++|+++.|+.++
T Consensus 282 --~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 282 --LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp --CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0111122356778999999999999999999999998764
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=320.78 Aligned_cols=243 Identities=19% Similarity=0.197 Sum_probs=187.9
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc----CCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~e 766 (955)
....||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++++++|||||++++++.. .+..++|||
T Consensus 30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEE
Confidence 567899999999999985 578899999997532 235668899999999999999999999875 356899999
Q ss_pred ecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-CCCCceECcccccccccccCCC
Q 002186 767 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 767 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
|+++|+|.+++.. ..++.....++.|+++||+|||+.. ++|+||||||+||+++ .++.+||+|||++.........
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (290)
T 1t4h_A 110 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 188 (290)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred ecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccc
Confidence 9999999999975 5688899999999999999999981 1399999999999998 7899999999998654433222
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+...|.+||.... .++.++||||+||++|||+||+.||......... .........+. .........+.
T Consensus 189 ~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~l~ 260 (290)
T 1t4h_A 189 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI--YRRVTSGVKPA-----SFDKVAIPEVK 260 (290)
T ss_dssp ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH--HHHHTTTCCCG-----GGGGCCCHHHH
T ss_pred cccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH--HHHHhccCCcc-----ccCCCCCHHHH
Confidence 2234556788897764 5889999999999999999999998643321110 00000000010 00111124577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+++.+||+.||++|||++|++++
T Consensus 261 ~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 261 EIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHccCChhhCCCHHHHhhC
Confidence 89999999999999999999863
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-36 Score=326.40 Aligned_cols=252 Identities=10% Similarity=0.043 Sum_probs=192.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEE-EcCCeeEEEEe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC-YNRHQAYLLYD 766 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~-~~~~~~~lv~e 766 (955)
+.|. ..+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|++++++++|++++..+++| ...+..++|||
T Consensus 9 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 9 NRYR--LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp --CE--EEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CceE--EeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 4566 788999999999999994 6899999998764322 23467889999999999888777766 56778899999
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee---CCCCCceECccccccccccc
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DfGl~~~~~~~ 840 (955)
|+ +|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 161 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence 99 9999999873 578999999999999999999999 99999999999999 78899999999998765432
Q ss_pred CC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCC
Q 002186 841 DG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 911 (955)
Q Consensus 841 ~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (955)
.. ....++..|.+||...+..++.++|||||||++|||+||+.||........... ............
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~ 238 (296)
T 4hgt_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK---YERISEKKMSTP 238 (296)
T ss_dssp TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH---HHHHHHHHHHSC
T ss_pred ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhh---hhhhhcccccch
Confidence 21 112345568889999888899999999999999999999999975332211111 111100000000
Q ss_pred -CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 912 -SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 912 -~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
..........+.+++..||+.||++|||++|+++.|+++
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 000011235678899999999999999999999998865
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=334.21 Aligned_cols=245 Identities=17% Similarity=0.191 Sum_probs=193.0
Q ss_pred hhhhccCCCCCceEEEeCC-C-----CcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLP-T-----GITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~-----g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||.||+|... + ++.||||.++... ...+.+.+|+++++++ +|||||+++++|.+.+..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 7788999999999999843 3 3589999997543 2356788999999999 8999999999999999999999
Q ss_pred eecCCCChhHHhhc----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 766 DYLPNGNLSEKIRT----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 766 ey~~~gsL~~~l~~----------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 206 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIG 206 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEEEBC
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeEEEC
Confidence 99999999999864 247888899999999999999999 99999999999999999999999
Q ss_pred cccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccc
Q 002186 830 EFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 830 DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
|||+++........ ...++..|.+||......++.++|||||||++|||+| |..|+....... . .........
T Consensus 207 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~-~~~~~~~~~ 284 (333)
T 2i1m_A 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-K-FYKLVKDGY 284 (333)
T ss_dssp CCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-H-HHHHHHHTC
T ss_pred ccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-H-HHHHHhcCC
Confidence 99998755432221 1123445788998888889999999999999999999 777776432111 0 001111111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
... ... .....+.+++..||+.||++|||++|+++.|+.+
T Consensus 285 ~~~---~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 285 QMA---QPA---FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp CCC---CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC---CCC---CCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 110 011 1124577899999999999999999999999865
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=331.35 Aligned_cols=252 Identities=20% Similarity=0.226 Sum_probs=189.2
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 759 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++...+
T Consensus 25 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 25 KRYQ--NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhee--EeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 4566 788999999999999984 579999999997532 23456789999999999999999999998654
Q ss_pred -eeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 760 -QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 760 -~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
..++||||++ |+|.+.+....++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred cceEEEEEcCC-CCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 7899999997 589999988889999999999999999999999 99999999999999999999999999987654
Q ss_pred ccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-ccc----------------
Q 002186 839 LADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLL---------------- 900 (955)
Q Consensus 839 ~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~---------------- 900 (955)
.... ....++..|.+||...+..++.++||||+||++|||+||+.||........+... ...
T Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 3221 1123556688999998888999999999999999999999998753321100000 000
Q ss_pred --------------cccccccccCCCC-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 901 --------------GEMYNENEVGSSS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 901 --------------~~~~~~~~~~~~~-~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.........+... ........+.+++.+||+.||++|||++|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000000000000 112235678899999999999999999999874
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=321.08 Aligned_cols=241 Identities=15% Similarity=0.189 Sum_probs=194.1
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 15 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 15 DFD--IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hce--eeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 355 788999999999999985 478899999996532 1246788999999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 999999999999975 568888999999999999999998 999999999999999999999999999865443222
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
....+...|.+||...+..++.++||||+||++|||+||+.||....... ....+.... ...++ .....+
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~---~~~~~~ 239 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------THRRIVNVD-LKFPP---FLSDGS 239 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTC-CCCCT---TSCHHH
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH------HHHHHhccc-cCCCC---cCCHHH
Confidence 22335566889999888888999999999999999999999986432110 011111111 11111 122456
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.+++.+|++.||++|||++|+++
T Consensus 240 ~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 240 KDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhhcCHhhCCCHHHHhh
Confidence 78899999999999999999986
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-36 Score=329.22 Aligned_cols=250 Identities=17% Similarity=0.210 Sum_probs=191.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEE----cCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCY----NRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~----~~~~~~lv~ey~ 768 (955)
..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++|||||++++++. ..+..++||||+
T Consensus 33 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 788999999999999995 689999999986533 34567889999999999999999999997 345789999999
Q ss_pred CCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 769 PNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 769 ~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 113 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 189 (317)
T 2buj_A 113 KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189 (317)
T ss_dssp TTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEE
T ss_pred CCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcccccc
Confidence 99999999864 368899999999999999999999 999999999999999999999999998765322111
Q ss_pred C-----------CcccccccCchhhhhcc---CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccc
Q 002186 843 S-----------FPAKIAWTESGEFYNAM---KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE 908 (955)
Q Consensus 843 ~-----------~~~~~~~~~~~e~~~~~---~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (955)
. ...++..|.+||..... .++.++|||||||++|||+||+.||........... ........
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~~--- 265 (317)
T 2buj_A 190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA-LAVQNQLS--- 265 (317)
T ss_dssp SHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHH-HHHHCC-----
T ss_pred cccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhh-HHhhccCC---
Confidence 0 01124557888887643 367899999999999999999999852110000000 00001000
Q ss_pred cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCCC
Q 002186 909 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPHG 954 (955)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~~ 954 (955)
.+.. ......+.+++.+||+.||++|||++|+++.|+.+++..
T Consensus 266 ~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 266 IPQS---PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp CCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred CCcc---ccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 1101 122345778999999999999999999999999887653
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-36 Score=325.80 Aligned_cols=252 Identities=10% Similarity=0.042 Sum_probs=194.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEE-EcCCeeEEEEe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC-YNRHQAYLLYD 766 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~-~~~~~~~lv~e 766 (955)
+.|. ..+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|++++++++|++++..++++ ...+..++|||
T Consensus 9 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 9 NRYR--LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred cEEE--EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 3455 788999999999999994 6899999999875432 34578899999999999888777766 55678899999
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee---CCCCCceECccccccccccc
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DfGl~~~~~~~ 840 (955)
|+ +|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 8999999973 568999999999999999999999 99999999999999 48889999999998765433
Q ss_pred CC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-ccccccccccccC
Q 002186 841 DG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLGEMYNENEVG 910 (955)
Q Consensus 841 ~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~ 910 (955)
.. ....++..|.+||...+..++.++|||||||++|||+||+.||............ .......... .
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~- 239 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-I- 239 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-H-
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc-h-
Confidence 21 1223455688899998888999999999999999999999999753322111110 0000000000 0
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
..........+.+++.+||+.||++|||++|+++.|+.+
T Consensus 240 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 240 -EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp -HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred -HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence 000011235677899999999999999999999999865
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=333.23 Aligned_cols=252 Identities=17% Similarity=0.216 Sum_probs=185.4
Q ss_pred hhhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.++|. ..+.||+|+||+||+|+ ..+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..++
T Consensus 33 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 33 IDRYR--RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp GGGEE--EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhEE--EEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 34566 88899999999999998 45899999999975432 24456789999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee-----CCCCCceECccccccc
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF-----DENMEPHLAEFGFKYL 836 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl-----~~~~~~ki~DfGl~~~ 836 (955)
||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 111 v~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 999998 599999976 468888999999999999999999 99999999999999 4555699999999876
Q ss_pred ccccCCC--CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------ccccc
Q 002186 837 TQLADGS--FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDG 898 (955)
Q Consensus 837 ~~~~~~~--~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~~~~~ 898 (955)
....... ...++..|.+||+..+. .++.++||||+||++|||+||+.||........ |....
T Consensus 187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp HC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred cCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence 5422211 12245568889988764 579999999999999999999999874321100 00000
Q ss_pred cccccccccccCCCCchHH-----HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 899 LLGEMYNENEVGSSSSLQD-----EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.........+......... ...++.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000000000000011111 2356789999999999999999999986
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=317.71 Aligned_cols=247 Identities=16% Similarity=0.183 Sum_probs=194.3
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.+.|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 6 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 6 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ecceE--EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 34566 788999999999999995 479999999997533 2356788999999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC-
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD- 841 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~- 841 (955)
|||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred EEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 999999999999975 468889999999999999999999 99999999999999999999999999987543221
Q ss_pred ---CCCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 842 ---GSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 842 ---~~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
.....+...|.+||......+ +.++||||+||++|||+||+.||......... . ......... ......
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~----~~~~~~~~~--~~~~~~ 233 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-Y----SDWKEKKTY--LNPWKK 233 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH-H----HHHHTTCTT--STTGGG
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH-H----HHhhhcccc--cCchhh
Confidence 111224455788888876554 77899999999999999999998753321110 0 000000000 011112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 234 IDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 23457789999999999999999999863
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-36 Score=348.50 Aligned_cols=247 Identities=17% Similarity=0.204 Sum_probs=196.5
Q ss_pred HhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc----cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++.+.+..
T Consensus 24 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 101 (484)
T 3nyv_A 24 FSDRYK--GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF 101 (484)
T ss_dssp HHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred ccCceE--EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 345566 788999999999999995 48999999999653 22466788999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee---CCCCCceECccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYL 836 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DfGl~~~ 836 (955)
++|||||++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 102 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 102 YLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp EEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 999999999999999865 567888999999999999999999 99999999999999 4678999999999876
Q ss_pred ccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 837 TQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 837 ~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
....... ...++++|.+||...+ .++.++||||+||++|||+||+.||....... ....+.........+.+
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~ 251 (484)
T 3nyv_A 179 FEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD------ILKKVEKGKYTFELPQW 251 (484)
T ss_dssp BCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCSGGG
T ss_pred cccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCCCCCCCccc
Confidence 5433221 1235677889998866 68899999999999999999999987432110 11111111101011222
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 252 KKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp GGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 233456778999999999999999999986
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=346.56 Aligned_cols=244 Identities=14% Similarity=0.112 Sum_probs=194.2
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
|. ..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 187 f~--~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 187 FL--DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp EE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eE--EEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 55 678899999999999996 579999999997532 23456788999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 766 DYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 766 ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999865 367888899999999999999999 999999999999999999999999999976543
Q ss_pred cCCC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 840 ADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 840 ~~~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
.... ...+++.|.+||+..+..++.++||||+||++|||+||+.||........ .......+.... ...+. .
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~--~~~~~~~i~~~~-~~~p~---~ 415 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRVLEQA-VTYPD---K 415 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC--HHHHHHHHHHCC-CCCCT---T
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh--HHHHHHHHhhcc-cCCCc---c
Confidence 3221 12466778999999888899999999999999999999999975432111 011111111111 11111 2
Q ss_pred HHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSM-----EEALK 945 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~-----~ev~~ 945 (955)
....+.+++.+||+.||++||++ +|+.+
T Consensus 416 ~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 416 FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 23456788899999999999975 66654
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=347.35 Aligned_cols=247 Identities=17% Similarity=0.204 Sum_probs=192.7
Q ss_pred HhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--------------chHHHHHHHHHHHhccCCCCceeE
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--------------TRIKIVSEFITRIGTVRHKNLIRL 751 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--------------~~~~~~~~e~~~l~~l~H~niv~l 751 (955)
+.+.|. ..+.||+|+||+||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++
T Consensus 34 i~~~Y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~ 111 (504)
T 3q5i_A 34 IGESYF--KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL 111 (504)
T ss_dssp GGGTEE--EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred cccceE--EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 445566 788999999999999995 578999999997532 224568899999999999999999
Q ss_pred eEEEEcCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC---Cc
Q 002186 752 LGFCYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EP 826 (955)
Q Consensus 752 ~g~~~~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~---~~ 826 (955)
+++|.+.+..++|||||++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++ .+
T Consensus 112 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 112 FDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSE
T ss_pred EEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccE
Confidence 9999999999999999999999999864 578999999999999999999999 999999999999998775 69
Q ss_pred eECcccccccccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccc
Q 002186 827 HLAEFGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 827 ki~DfGl~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
||+|||+++....... ....++++|.+||+... .++.++||||+||++|||++|+.||...... .....+..
T Consensus 189 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~ 261 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ------DIIKKVEK 261 (504)
T ss_dssp EECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHH
T ss_pred EEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHc
Confidence 9999999976543322 12235677889998764 6889999999999999999999998743211 11111111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.......+.+......+.+++.+||+.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 262 GKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp CCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1100000111122356788999999999999999999985
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=335.64 Aligned_cols=251 Identities=12% Similarity=0.045 Sum_probs=188.2
Q ss_pred hcccchhhhccCCCCCceEEEeCC----CCcEEEEEEeecccch------------HHHHHHHHHHHhccCCCCceeEeE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGATR------------IKIVSEFITRIGTVRHKNLIRLLG 753 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~~~------------~~~~~~e~~~l~~l~H~niv~l~g 753 (955)
.|. ..+.||+|+||.||+|... ++..||||++...... .+.+.+|+..++.++||||+++++
T Consensus 38 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 38 QWV--LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp EEE--EEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred eEE--EEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 355 7889999999999999964 6789999998754211 223567888899999999999999
Q ss_pred EEEc----CCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC--C
Q 002186 754 FCYN----RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM--E 825 (955)
Q Consensus 754 ~~~~----~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~--~ 825 (955)
++.. .+..++||||+ +|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++ .
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCc
Confidence 9987 67899999999 9999999976 578999999999999999999999 999999999999999877 9
Q ss_pred ceECcccccccccccCC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc
Q 002186 826 PHLAEFGFKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 896 (955)
Q Consensus 826 ~ki~DfGl~~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~ 896 (955)
+||+|||+++....... ....++..|.+||...+..++.++|||||||++|||+||+.||......... .
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~-~ 270 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA-V 270 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH-H
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH-H
Confidence 99999999976532211 1122455688899998888999999999999999999999998632211100 0
Q ss_pred cccccccccccccCCCCchH------HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 897 DGLLGEMYNENEVGSSSSLQ------DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
........... ..... .....+.+++..||+.||++|||++||++.|+.+.
T Consensus 271 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 271 QTAKTNLLDEL----PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHTT----THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHhhcccc----cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 00000000000 00000 12346788999999999999999999999998754
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=344.53 Aligned_cols=187 Identities=17% Similarity=0.262 Sum_probs=148.2
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcC-----C
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----H 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~ 759 (955)
+.|. ..+.||+|+||+||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++... +
T Consensus 53 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 53 DRYE--IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp TTEE--ECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCeE--EeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 4566 888999999999999984 58999999999653 22356788999999999999999999999543 5
Q ss_pred eeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
..|+||||+ +|+|.++++. .+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 131 ELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp CEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred eEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 789999998 4799999976 468888999999999999999999 9999999999999999999999999999765
Q ss_pred cccCC-----------------------------CCcccccccCchhhh-hccCCcccccchhHHHHHHHHHhC
Q 002186 838 QLADG-----------------------------SFPAKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTN 881 (955)
Q Consensus 838 ~~~~~-----------------------------~~~~~~~~~~~~e~~-~~~~~~~~~DV~S~Gvvl~Elltg 881 (955)
..... ....++++|.+||+. ....++.++||||+|||+|||+||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 32110 011246778999975 566789999999999999999994
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=323.56 Aligned_cols=243 Identities=16% Similarity=0.196 Sum_probs=189.5
Q ss_pred hhh-hccCCCCCceEEEeC---CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECE-EAARPQSAAGCKAVL---PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~-~~g~g~~g~vy~~~~---~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+ .||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++++++||||+++++++ ..+..++||||
T Consensus 20 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~ 98 (291)
T 1xbb_A 20 LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEM 98 (291)
T ss_dssp EEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEEC
T ss_pred hccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEe
Confidence 445 899999999999953 4678999999975422 256788999999999999999999999 55678999999
Q ss_pred cCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-
Q 002186 768 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 844 (955)
Q Consensus 768 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~- 844 (955)
+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 99 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (291)
T 1xbb_A 99 AELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175 (291)
T ss_dssp CTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred CCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCccc
Confidence 999999999976 468888999999999999999999 99999999999999999999999999987654322111
Q ss_pred ----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 845 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 845 ----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
..+...|.+||...+..++.++|||||||++|||+| |+.||....... ... .+......... ....
T Consensus 176 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~---~~~~~~~~~~~---~~~~ 246 (291)
T 1xbb_A 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTA---MLEKGERMGCP---AGCP 246 (291)
T ss_dssp C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHH---HHHTTCCCCCC---TTCC
T ss_pred ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHH---HHHcCCCCCCC---CCCC
Confidence 112244778898888888999999999999999999 888886432110 000 01000001001 1223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
..+.+++..||+.||++|||++|+++.|+.+
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 4577899999999999999999999999865
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=328.06 Aligned_cols=241 Identities=17% Similarity=0.153 Sum_probs=189.0
Q ss_pred hhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 697 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
+.||+|+||.||+|.. .+|+.||||+++... .....+.+|++++.+++ ||||+++++++.+.+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 7899999999999985 479999999997532 23567888999999885 699999999999999999999999999
Q ss_pred ChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---CCCceECcccccccccccCC-C
Q 002186 772 NLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLADG-S 843 (955)
Q Consensus 772 sL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DfGl~~~~~~~~~-~ 843 (955)
+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++....... .
T Consensus 115 ~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 191 (327)
T 3lm5_A 115 EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR 191 (327)
T ss_dssp EGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------
T ss_pred cHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccc
Confidence 99999854 468899999999999999999999 9999999999999998 78999999999876543322 1
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...++..|.+||+.....++.++||||+||++|||+||+.||....... ....+.........+........+.
T Consensus 192 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~~ 265 (327)
T 3lm5_A 192 EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE------TYLNISQVNVDYSEETFSSVSQLAT 265 (327)
T ss_dssp --CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred cccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH------HHHHHHhcccccCchhhcccCHHHH
Confidence 2235566889999988889999999999999999999999986432111 0000000000000111122335577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+++.+||+.||++|||++|++++
T Consensus 266 ~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 266 DFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHHHcCCChhhCcCHHHHhCC
Confidence 88999999999999999999864
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-36 Score=341.93 Aligned_cols=193 Identities=19% Similarity=0.181 Sum_probs=165.2
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhcc------CCCCceeEeEEEEcCCee
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV------RHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l------~H~niv~l~g~~~~~~~~ 761 (955)
.+|. ..+.||+|+||.||+|.. .+|+.||||+++......+.+.+|+++++.+ +|+||+++++++...+..
T Consensus 97 ~ry~--~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 97 YRYE--VLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTEE--EEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred CcEE--EEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 3455 888999999999999985 5789999999986555556677788887766 577999999999999999
Q ss_pred EEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC--ceECcccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--PHLAEFGFKY 835 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~--~ki~DfGl~~ 835 (955)
++||||++ |+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+|||+++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 699998875 368999999999999999999999 9999999999999999887 9999999986
Q ss_pred cccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCC
Q 002186 836 LTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 888 (955)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~ 888 (955)
....... ...++.+|.+||+..+..++.++|||||||++|||+||+.||...
T Consensus 251 ~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQRVY-TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTCCCC-SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCccc-ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 5433222 223556688999998888999999999999999999999988643
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=327.94 Aligned_cols=248 Identities=15% Similarity=0.173 Sum_probs=190.1
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||++... ......+.+|+.++++++|||||++++++.+.+..
T Consensus 31 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 31 NIT--LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GCE--EEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred heE--EEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 355 788999999999999983 46789999999643 23355788899999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhcC---------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---CCCceEC
Q 002186 762 YLLYDYLPNGNLSEKIRTK---------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLA 829 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~~---------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~ 829 (955)
++||||+++|+|.+++... .++.++..++.|+++||+|||+. +|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999752 67888999999999999999999 9999999999999984 4569999
Q ss_pred cccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccc
Q 002186 830 EFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 830 DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
|||+++....... ....+...|.+||......++.++|||||||++|||+| |+.|+...... .....+.
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~~~ 259 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEFVT 259 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH------HHHHHHh
Confidence 9999865432211 11123445788998888889999999999999999999 77777533210 0011111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
........ ......+.+++.+||+.||++|||++|++++|+.+.
T Consensus 260 ~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 260 SGGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp TTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCC---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 11000001 112345778999999999999999999999988653
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-36 Score=335.63 Aligned_cols=246 Identities=15% Similarity=0.103 Sum_probs=190.4
Q ss_pred hcccchhhhccCCCCCceEEEeC----CCCcEEEEEEeeccc-----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH 759 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~-----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~ 759 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+++++++ +||||+++++++..++
T Consensus 55 ~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 55 NFE--LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GEE--EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ceE--EEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 455 888999999999999986 479999999986532 2245567789999999 6999999999999999
Q ss_pred eeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
..++||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 99999999999999999975 568888999999999999999999 9999999999999999999999999998754
Q ss_pred cccCC---CCcccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCC
Q 002186 838 QLADG---SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 838 ~~~~~---~~~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
..... ....++..|.+||+..+ ..++.++|||||||++|||+||+.||........ ............ .
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~-~--- 283 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSE-P--- 283 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHCC-C---
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch--HHHHHHHHhccC-C---
Confidence 32211 11224566888998875 3478899999999999999999999874322111 011111111111 1
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
+........+.+++.+||+.||++|| |++|++++
T Consensus 284 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 284 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 11112234567889999999999999 99999875
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-36 Score=322.94 Aligned_cols=253 Identities=17% Similarity=0.185 Sum_probs=192.9
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc--CCeeE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAY 762 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~ 762 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+ .+..+
T Consensus 6 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 6 EDYE--VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhee--eehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 3455 778999999999999985 489999999997533 235678899999999999999999998854 57899
Q ss_pred EEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCC--CCCcccCCCCCCCeeeCCCCCceECccccc
Q 002186 763 LLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDC--YPAIPHGDLKASNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~--~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~ 834 (955)
+||||+++|+|.+++.. ..++.....++.|+++||+|||+.. ..+|+||||||+||+++.++.+||+|||++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 99999999999999965 2789999999999999999999981 012999999999999999999999999998
Q ss_pred ccccccCCC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCC
Q 002186 835 YLTQLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 835 ~~~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
+........ ...+...|.+||......++.++|||||||++|||+||+.||...... .....+.........
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~i~~~~~~~~~ 237 (279)
T 2w5a_A 164 RILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK------ELAGKIREGKFRRIP 237 (279)
T ss_dssp HHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCCCC
T ss_pred eeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH------HHHHHHhhcccccCC
Confidence 754322110 112345578899988888899999999999999999999998643210 011111111100001
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
. .....+.+++.+||+.||++|||++|+++.+....+
T Consensus 238 ~---~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 238 Y---RYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred c---ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 1 123457788999999999999999999998765443
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-36 Score=330.25 Aligned_cols=252 Identities=21% Similarity=0.286 Sum_probs=189.9
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
++|. ..+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++++++|||||+++++|.+.+..++|
T Consensus 25 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 25 EKYE--NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGEE--EEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhe--eeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 3465 788999999999999995 4699999999865332 245678899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999999999888753 578999999999999999999999 999999999999999999999999999875433221
Q ss_pred --CCcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc------------------cccc
Q 002186 843 --SFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID------------------GLLG 901 (955)
Q Consensus 843 --~~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~------------------~~~~ 901 (955)
....+..+|.+||...+. .++.++||||+||++|||+||+.||............ ....
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 112345668888987664 6889999999999999999999998754321100000 0000
Q ss_pred ccccccccCCCCc---hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 902 EMYNENEVGSSSS---LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 902 ~~~~~~~~~~~~~---~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....+......+. .+.....+.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000000000 0123456889999999999999999999875
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=338.84 Aligned_cols=250 Identities=14% Similarity=0.080 Sum_probs=191.6
Q ss_pred hcccchhhhccCCCCCceEEEeCC---------CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCcee----------
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP---------TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIR---------- 750 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~---------~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~---------- 750 (955)
.|. ..+.||+|+||.||+|+.. +|+.||||.+... +.+.+|++++++++|||||+
T Consensus 43 ~y~--~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 43 QWK--LKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp EEE--EEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred eEE--EEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 455 7889999999999999865 3889999998743 35778999999999999998
Q ss_pred -----EeEEEEc-CCeeEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 751 -----LLGFCYN-RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 751 -----l~g~~~~-~~~~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
+++++.. ++..++||||+ +|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEE
Confidence 6788876 77899999999 9999999975 478999999999999999999999 99999999999999
Q ss_pred CCCC--CceECcccccccccccCC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCC
Q 002186 821 DENM--EPHLAEFGFKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGS 889 (955)
Q Consensus 821 ~~~~--~~ki~DfGl~~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~ 889 (955)
+.++ .+||+|||+++....... ....++..|.+||...+..++.++|||||||++|||+||+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 899999999976443221 11134556889999988889999999999999999999999987433
Q ss_pred CCCCccccccccccccc-ccc-CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 890 SLQNKPIDGLLGEMYNE-NEV-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 890 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
........ ........ ... ............+.+++.+||+.||++|||++|+++.|+.+
T Consensus 273 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 334 (352)
T 2jii_A 273 PNTEDIMK-QKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEAL 334 (352)
T ss_dssp TCHHHHHH-HHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred cCHHHHHH-HHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence 11111100 00000000 000 00000011235677889999999999999999999998865
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=330.70 Aligned_cols=237 Identities=10% Similarity=0.051 Sum_probs=186.5
Q ss_pred hhhhccCCCCCceEEEe------CCCCcEEEEEEeecccchHHHHHHHHHHHhccC---CCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAV------LPTGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~------~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||+||+|+ ..+|+.||||+++.. ....+.+|++++++++ |+|||++++++...+..++||
T Consensus 69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~ 146 (365)
T 3e7e_A 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVG 146 (365)
T ss_dssp EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEE
T ss_pred EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEE
Confidence 77899999999999994 567899999999743 3445677777777776 999999999999999999999
Q ss_pred eecCCCChhHHhhc-------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-----------CCCce
Q 002186 766 DYLPNGNLSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-----------NMEPH 827 (955)
Q Consensus 766 ey~~~gsL~~~l~~-------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-----------~~~~k 827 (955)
|||++|+|.+++.. ..++..+..|+.|+++||+|||+. +|+||||||+|||++. ++.+|
T Consensus 147 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~k 223 (365)
T 3e7e_A 147 ELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLA 223 (365)
T ss_dssp CCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------CTTEE
T ss_pred eccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccccCCEE
Confidence 99999999999963 478999999999999999999998 9999999999999998 89999
Q ss_pred ECcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccc
Q 002186 828 LAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEM 903 (955)
Q Consensus 828 i~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~ 903 (955)
|+|||+++....... ....++..|.+||+..+..++.++|||||||++|||+||+.||...... .+. ....
T Consensus 224 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~----~~~~ 298 (365)
T 3e7e_A 224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG-ECK----PEGL 298 (365)
T ss_dssp ECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-EEE----ECSC
T ss_pred EeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-cee----echh
Confidence 999999965432111 1123566789999998888999999999999999999999998633211 000 1111
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHhhcc
Q 002186 904 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR-PSMEEALKLLSGL 950 (955)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~R-Pt~~ev~~~L~~~ 950 (955)
... .. .. ..+.+++..|++.+|.+| |+++++.+.|+.+
T Consensus 299 ~~~-----~~-~~---~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 299 FRR-----LP-HL---DMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp CTT-----CS-SH---HHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred ccc-----cC-cH---HHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 111 11 12 234466778999999998 6788877776643
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=331.86 Aligned_cols=248 Identities=19% Similarity=0.240 Sum_probs=183.7
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccch--HHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATR--IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|... +|+.||||+++..... ...+.+|++++++++|||||++++++.+++..++||||++ |
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 7788999999999999964 8999999999753322 1234578999999999999999999999999999999997 6
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Ccc
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 846 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~ 846 (955)
+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 161 (324)
T 3mtl_A 85 DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV 161 (324)
T ss_dssp EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-----------
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccccc
Confidence 99998865 367888999999999999999999 9999999999999999999999999998754332221 122
Q ss_pred cccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc-ccccc--------ccccc------cc-c
Q 002186 847 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DGLLG--------EMYNE------NE-V 909 (955)
Q Consensus 847 ~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~-~~~~~--------~~~~~------~~-~ 909 (955)
++.+|.+||...+ ..++.++||||+||++|||+||+.||........... ..... ..... .. .
T Consensus 162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (324)
T 3mtl_A 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPK 241 (324)
T ss_dssp -CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCC
T ss_pred CcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccccccc
Confidence 4566888898765 5689999999999999999999999874321100000 00000 00000 00 0
Q ss_pred CCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 910 GSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 910 ~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...... +.....+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 242 YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000 1123467799999999999999999999863
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=321.56 Aligned_cols=240 Identities=15% Similarity=0.179 Sum_probs=188.6
Q ss_pred hhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecc---cchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWG---ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 762 (955)
.+.|. ..+.||+|+||.||+|... +|+.||||+++.. ......+.+|+..+.++ +|||||++++++.+++..+
T Consensus 10 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 10 TTEFH--ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred cchhh--hhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 34566 7889999999999999964 8999999999753 22355677889999888 9999999999999999999
Q ss_pred EEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC--------------
Q 002186 763 LLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-------------- 822 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-------------- 822 (955)
+||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999999975 368899999999999999999999 9999999999999984
Q ss_pred -----CCCceECcccccccccccCCCCcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc
Q 002186 823 -----NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 896 (955)
Q Consensus 823 -----~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~ 896 (955)
...+||+|||.+....... ...++..|.+||..... .++.++|||||||++|||++|..++......
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~----- 237 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ--VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW----- 237 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC--CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH-----
T ss_pred cccCCceEEEEcccccccccCCcc--ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH-----
Confidence 4479999999987654322 22245557788887654 5678999999999999999998766432110
Q ss_pred cccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 897 DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.......... .+. .....+.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~~~----~~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 238 HEIRQGRLPR----IPQ---VLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHHHTTCCCC----CSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHHcCCCCC----CCc---ccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 0000011100 011 122457788899999999999999999864
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=328.05 Aligned_cols=249 Identities=14% Similarity=0.162 Sum_probs=191.4
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccC-CCCceeEeEEEEc--CCeeEEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYN--RHQAYLLY 765 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~--~~~~~lv~ 765 (955)
.|. ..+.||+|+||.||+|. ..+|+.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 37 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 37 DYQ--LVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred ceE--EEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 355 78899999999999998 468999999998743 3567889999999997 9999999999987 56789999
Q ss_pred eecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-CceECcccccccccccCC-C
Q 002186 766 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADG-S 843 (955)
Q Consensus 766 ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~-~~ki~DfGl~~~~~~~~~-~ 843 (955)
||+++|+|.++++. .++.+...++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++....... .
T Consensus 113 e~~~~~~l~~~~~~-~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~ 188 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT-LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 188 (330)
T ss_dssp ECCCCCCHHHHGGG-CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCC
T ss_pred eccCchhHHHHHHh-CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccc
Confidence 99999999998864 78888999999999999999999 999999999999999776 899999999976543322 2
Q ss_pred CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc--c-----cccccccc---------
Q 002186 844 FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID--G-----LLGEMYNE--------- 906 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~--~-----~~~~~~~~--------- 906 (955)
...+..+|.+||.... ..++.++||||+||++|||+||+.||..+......... . ...+..+.
T Consensus 189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (330)
T 3nsz_A 189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 268 (330)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHH
T ss_pred cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccch
Confidence 2235566788888766 66899999999999999999999999644321100000 0 00000000
Q ss_pred ----------cc--cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 907 ----------NE--VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 907 ----------~~--~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+ .............+.+++.+||+.||++|||++|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 269 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 00001111134568899999999999999999999973
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=332.35 Aligned_cols=251 Identities=21% Similarity=0.263 Sum_probs=186.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 759 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++...+
T Consensus 25 ~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 25 AVYR--DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp SSEE--EEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ceEE--EeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 4455 788999999999999995 589999999996432 23556789999999999999999999998653
Q ss_pred -eeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 760 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 760 -~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
..|+||||+ +++|.++++. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 469999999 7899999875 568888899999999999999999 9999999999999999999999999999765
Q ss_pred cccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-c--------ccc------
Q 002186 838 QLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-G--------LLG------ 901 (955)
Q Consensus 838 ~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~--------~~~------ 901 (955)
..... ...++.+|.+||...+ ..++.++||||+||++|||+||+.||.+.......... . ...
T Consensus 179 ~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~ 257 (367)
T 1cm8_A 179 DSEMT-GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 257 (367)
T ss_dssp CSSCC-SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred ccccC-cCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHH
Confidence 43222 2235667889998766 67899999999999999999999998754321100000 0 000
Q ss_pred --ccc---cccc-cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 902 --EMY---NENE-VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 902 --~~~---~~~~-~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
... .... .............+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000 0000 00000011223567889999999999999999999974
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=321.06 Aligned_cols=243 Identities=19% Similarity=0.240 Sum_probs=195.2
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 23 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 23 LFT--KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp TEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHH--HhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 455 788899999999999984 579999999997543 345778899999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--C
Q 002186 767 YLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--S 843 (955)
Q Consensus 767 y~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~ 843 (955)
|+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........ .
T Consensus 101 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 177 (303)
T 3a7i_A 101 YLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 177 (303)
T ss_dssp CCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBC
T ss_pred eCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccccccC
Confidence 9999999999975 568999999999999999999999 999999999999999999999999999876543221 1
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+...|.+||......++.++|||||||++|||+||+.|+....... ....+.......... .....+.
T Consensus 178 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~l~ 248 (303)
T 3a7i_A 178 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK------VLFLIPKNNPPTLEG---NYSKPLK 248 (303)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSCCCCCCS---SCCHHHH
T ss_pred ccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH------HHHHhhcCCCCCCcc---ccCHHHH
Confidence 1224556888999988888999999999999999999999986432110 000000000000011 1224577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+++.+||+.||++|||++|+++.
T Consensus 249 ~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 249 EFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp HHHHHHCCSSGGGSCCHHHHTTC
T ss_pred HHHHHHcCCChhhCcCHHHHhhC
Confidence 88999999999999999999864
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-36 Score=326.38 Aligned_cols=246 Identities=20% Similarity=0.240 Sum_probs=174.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++.+++++||||+++++++...+..++||||+++|
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 788999999999999985 478999999986532 23556788999999999999999999999999999999999999
Q ss_pred ChhHHhhc----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 772 NLSEKIRT----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 772 sL~~~l~~----------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 99999863 368899999999999999999999 99999999999999999999999999986543221
Q ss_pred C-------CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccc--cCC
Q 002186 842 G-------SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE--VGS 911 (955)
Q Consensus 842 ~-------~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 911 (955)
. ....++..|.+||.... ..++.++|||||||++|||+||+.||......... ............ ...
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~ 253 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL--MLTLQNDPPSLETGVQD 253 (303)
T ss_dssp ------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH--HHHHTSSCCCTTC----
T ss_pred CccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHH--HHHhccCCCcccccccc
Confidence 1 11124455778888765 56889999999999999999999998743321100 000000000000 000
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..........+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 254 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred chhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0000112345778899999999999999999986
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-35 Score=320.45 Aligned_cols=247 Identities=21% Similarity=0.231 Sum_probs=193.2
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----------chHHHHHHHHHHHhccC-CCCceeEeEEE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----------TRIKIVSEFITRIGTVR-HKNLIRLLGFC 755 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----------~~~~~~~~e~~~l~~l~-H~niv~l~g~~ 755 (955)
.+.|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++ ||||+++++++
T Consensus 16 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 16 YENYE--PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp TTTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhccc--eeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34566 788999999999999995 579999999996532 12356778999999996 99999999999
Q ss_pred EcCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccc
Q 002186 756 YNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833 (955)
Q Consensus 756 ~~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl 833 (955)
.+++..++||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999999975 568889999999999999999999 999999999999999999999999999
Q ss_pred cccccccCCC-CcccccccCchhhhh------ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccc
Q 002186 834 KYLTQLADGS-FPAKIAWTESGEFYN------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 906 (955)
Q Consensus 834 ~~~~~~~~~~-~~~~~~~~~~~e~~~------~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 906 (955)
+......... ...+...|.+||... ...++.++||||+||++|||+||+.|+....... ....+...
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~ 244 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML------MLRMIMSG 244 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHT
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH------HHHHHhcC
Confidence 8765432221 122455678888774 3457889999999999999999999986432110 01111111
Q ss_pred cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 907 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+........+.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 100011112233456788999999999999999999986
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=320.34 Aligned_cols=243 Identities=14% Similarity=0.169 Sum_probs=194.3
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+.|. ..+.||+|+||.||+|... +|+.||+|.+.... ...+.+.+|++++++++|||||++++++.+.+..++
T Consensus 15 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 15 RRYV--RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp EEEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cceE--EEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 3455 7889999999999999964 68899999987532 235668889999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+++++|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 93 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 93 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999998865 568999999999999999999999 99999999999999999999999999987653222
Q ss_pred C--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....+...|.+||......++.++||||+||++|||+||+.||....... ......... ...+. ...
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~---~~~ 239 (294)
T 2rku_A 170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNE-YSIPK---HIN 239 (294)
T ss_dssp CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTC-CCCCT---TSC
T ss_pred cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHhhcc-CCCcc---ccC
Confidence 1 11224556788999888888999999999999999999999986432110 001111111 11111 112
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 240 PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 456788899999999999999999863
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=326.83 Aligned_cols=242 Identities=14% Similarity=0.174 Sum_probs=194.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|++++++++|||||++++++.+.+..++
T Consensus 41 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 41 RRYV--RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp EEEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred CceE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3455 788999999999999995 468899999987532 235678899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+++++|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 119 v~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 119 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp EECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999998865 568999999999999999999999 99999999999999999999999999987653222
Q ss_pred C--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....+...|.+||......++.++|||||||++|||+||+.||....... ....+.... ..... ...
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~---~~~ 265 (335)
T 2owb_A 196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNE-YSIPK---HIN 265 (335)
T ss_dssp CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTC-CCCCT---TSC
T ss_pred ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHHhcCC-CCCCc---cCC
Confidence 1 11224556888999888888999999999999999999999986432110 000111111 00111 112
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..+.+++.+||+.||++|||++|+++
T Consensus 266 ~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 266 PVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 35678889999999999999999986
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-35 Score=319.33 Aligned_cols=241 Identities=17% Similarity=0.183 Sum_probs=186.0
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
....||+|+||.||+|. ..+|+.||||.+..... ..+.+.+|++++++++|||||++++++.+.+..++||||+++|+
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 105 (295)
T 2clq_A 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGS 105 (295)
T ss_dssp SBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEE
T ss_pred CcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCC
Confidence 44589999999999999 46889999999976433 35678899999999999999999999999999999999999999
Q ss_pred hhHHhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-CCCceECcccccccccccCC--CC
Q 002186 773 LSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADG--SF 844 (955)
Q Consensus 773 L~~~l~~~-----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-~~~~ki~DfGl~~~~~~~~~--~~ 844 (955)
|.+++... .++.....++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++....... ..
T Consensus 106 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 182 (295)
T 2clq_A 106 LSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182 (295)
T ss_dssp HHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CC
T ss_pred HHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccc
Confidence 99999753 35777888999999999999999 9999999999999987 89999999999875432211 11
Q ss_pred cccccccCchhhhhcc--CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAM--KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~--~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
..+...|.+||..... .++.++|||||||++|||+||+.||............. ...... .... ......+
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~-~~~~---~~~~~~~ 255 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVH-PEIP---ESMSAEA 255 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH---HHHCCC-CCCC---TTSCHHH
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh---cccccc-cccc---ccCCHHH
Confidence 2245567888887654 37889999999999999999999986322111000000 000000 0001 1223457
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.+++.+||+.||++|||++|+++
T Consensus 256 ~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 256 KAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHHHTTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHccCChhhCCCHHHHhc
Confidence 78899999999999999999986
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=316.73 Aligned_cols=239 Identities=14% Similarity=0.185 Sum_probs=186.0
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++.+++++||||+++++++.+.+..++||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccC
Confidence 7788999999999999964 89999999997532 224578899999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-CCcc
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 846 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-~~~~ 846 (955)
+|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........ ....
T Consensus 95 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 171 (276)
T 2h6d_A 95 GGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC 171 (276)
T ss_dssp SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--------
T ss_pred CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCcceeccc
Confidence 9999999965 568889999999999999999999 999999999999999999999999999876543221 1122
Q ss_pred cccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
+...|.+||...+..+ +.++||||+||++|||+||+.||...... .....+.... ...+. .....+.++
T Consensus 172 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~~~---~~~~~l~~l 241 (276)
T 2h6d_A 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP------TLFKKIRGGV-FYIPE---YLNRSVATL 241 (276)
T ss_dssp -----CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSCHHHHHH
T ss_pred CCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------HHHHHhhcCc-ccCch---hcCHHHHHH
Confidence 4455778888776554 68899999999999999999998643210 0011111110 00011 112456788
Q ss_pred HHHccCCCCCCCCCHHHHHHH
Q 002186 926 ALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.+||+.||++|||++|++++
T Consensus 242 i~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 242 LMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHccCChhhCCCHHHHHhC
Confidence 999999999999999999974
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=331.25 Aligned_cols=253 Identities=22% Similarity=0.242 Sum_probs=187.5
Q ss_pred hhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccch------HHHHHHHHHHHhccCCCCceeEeEEEEcCCe
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATR------IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 760 (955)
.+.|. ..+.||+|+||.||+|+.. +|+.||||+++..... .+.+.+|++++++++|||||++++++.+.+.
T Consensus 9 ~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 9 AKRYE--KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ----C--EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred hcccE--EEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34566 7889999999999999964 7999999999753211 2357789999999999999999999999999
Q ss_pred eEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
.++||||+++ +|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999985 89888875 357888899999999999999999 9999999999999999999999999998765
Q ss_pred cccCC--CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Ccccccc
Q 002186 838 QLADG--SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGL 899 (955)
Q Consensus 838 ~~~~~--~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~~~~~ 899 (955)
..... ....++.+|.+||...+ ..++.++||||+||++|||++|..|+....... .|.....
T Consensus 163 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 242 (346)
T 1ua2_A 163 GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS 242 (346)
T ss_dssp TSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTS
T ss_pred cCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhcc
Confidence 43221 12235666888998755 457889999999999999999988876432110 0000000
Q ss_pred ccccccccccCCCC---chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 900 LGEMYNENEVGSSS---SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 900 ~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..+..........+ ........+.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000000000000 001223568899999999999999999999874
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=318.65 Aligned_cols=230 Identities=12% Similarity=0.047 Sum_probs=181.7
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.+|. ..+.||+|+||.||+|... +|+.||||++..... ..+.+.+|++.+++++|||||++++++.+++..|+
T Consensus 31 ~~y~--i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 108 (286)
T 3uqc_A 31 GRYR--LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV 108 (286)
T ss_dssp TTEE--EEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred CcEE--EEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence 3466 7789999999999999964 699999999975432 24678899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 764 LYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
||||+++|+|.++++......+..+|+.|+++||+|||+. +|+||||||+||+++.++.+||+++|..
T Consensus 109 v~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~--------- 176 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATM--------- 176 (286)
T ss_dssp EEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCC---------
T ss_pred EEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecccc---------
Confidence 9999999999999987666667888999999999999999 9999999999999999999999966532
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
..++.++|||||||++|||+||+.||............. ....................+.
T Consensus 177 ----------------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~ 237 (286)
T 3uqc_A 177 ----------------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE---RDTAGQPIEPADIDRDIPFQIS 237 (286)
T ss_dssp ----------------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC---BCTTSCBCCHHHHCTTSCHHHH
T ss_pred ----------------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH---HHhccCCCChhhcccCCCHHHH
Confidence 125678899999999999999999998543322110000 0001100000000012234577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
+++.+||+.||++| |++|+++.|+.+..
T Consensus 238 ~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 238 AVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp HHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred HHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 89999999999999 99999999987643
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=329.84 Aligned_cols=250 Identities=17% Similarity=0.154 Sum_probs=192.4
Q ss_pred hcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccch------------------HHHHHHHHHHHhccCCCCceeE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR------------------IKIVSEFITRIGTVRHKNLIRL 751 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~------------------~~~~~~e~~~l~~l~H~niv~l 751 (955)
.|. ..+.||+|+||.||+|.. +|+.||||++...... .+.+.+|++++++++||||+++
T Consensus 32 ~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 32 DYR--IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp TEE--EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred ceE--EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 455 788999999999999999 9999999999753211 1788999999999999999999
Q ss_pred eEEEEcCCeeEEEEeecCCCChhHH------hhc----CCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeee
Q 002186 752 LGFCYNRHQAYLLYDYLPNGNLSEK------IRT----KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 752 ~g~~~~~~~~~lv~ey~~~gsL~~~------l~~----~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl 820 (955)
++++.+.+..++||||+++|+|.++ +.. ..++..+..++.|+++||+|||+ . +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999998 543 45788999999999999999998 7 99999999999999
Q ss_pred CCCCCceECcccccccccccCCCCcccccccCchhhhhcc-CCcc-cccchhHHHHHHHHHhCCCCCCCCCCCCCccccc
Q 002186 821 DENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-KEEM-YMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG 898 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~-~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~ 898 (955)
+.++.+||+|||++............+...|.+||..... .++. ++|||||||++|||+||+.||......... ...
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~ 264 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL-FNN 264 (348)
T ss_dssp CTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH-HHH
T ss_pred cCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH-HHH
Confidence 9999999999999876533322222345567888988766 5555 899999999999999999998754321100 000
Q ss_pred cccc---cc-------cccccC-CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 899 LLGE---MY-------NENEVG-SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 899 ~~~~---~~-------~~~~~~-~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.... .. .+.... ...........+.+++.+||+.||++|||++|++++
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 00 000000 000001223567889999999999999999999873
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=321.39 Aligned_cols=246 Identities=17% Similarity=0.198 Sum_probs=188.7
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
+.|. ..+.||+|+||.||+|+.. +|+.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 19 ~~y~--i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 19 EVWE--IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GTEE--EEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccee--ecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 4466 7888999999999999964 69999999987543 345678899999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc--C
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA--D 841 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~--~ 841 (955)
|+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK 173 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccccc
Confidence 9999999998864 578999999999999999999999 9999999999999999999999999987532211 1
Q ss_pred CCCcccccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 842 GSFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
.....+...|.+||... ...++.++|||||||++|||+||+.|+....... ......... ........
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~~~~ 246 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKSD-PPTLLTPS 246 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSC-CCCCSSGG
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHhccC-CcccCCcc
Confidence 11122445577888773 5567889999999999999999999986432110 000111010 00001111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.....+.+++.+||+.||++|||++|++++
T Consensus 247 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 247 KWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp GSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 223457789999999999999999999863
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=325.85 Aligned_cols=249 Identities=16% Similarity=0.152 Sum_probs=188.2
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---------hHHHHHHHHHHHhccCCCCceeEeEE
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGF 754 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~ 754 (955)
..+.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ....+.+|++++++++||||++++++
T Consensus 6 ~~l~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 83 (322)
T 2ycf_A 6 KALRDEYI--MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 83 (322)
T ss_dssp HHHHHHEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEE
T ss_pred hhhhhcee--EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeE
Confidence 34455677 788999999999999985 5789999999864321 12347889999999999999999999
Q ss_pred EEcCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC---ceEC
Q 002186 755 CYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLA 829 (955)
Q Consensus 755 ~~~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~ 829 (955)
+..++ .++||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++. +||+
T Consensus 84 ~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 84 FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp EESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred EcCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 97765 8999999999999999865 467888899999999999999999 9999999999999987654 9999
Q ss_pred cccccccccccCCC-CcccccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccc
Q 002186 830 EFGFKYLTQLADGS-FPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 830 DfGl~~~~~~~~~~-~~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
|||+++........ ...++..|.+||+.. ...++.++|||||||++|||+||+.||........ ... .+..
T Consensus 160 Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~---~~~~ 234 (322)
T 2ycf_A 160 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKD---QITS 234 (322)
T ss_dssp CCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHH---HHHH
T ss_pred cCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHH---HHHh
Confidence 99998764322110 112445678888863 45678899999999999999999999874332111 000 0100
Q ss_pred ccccCCCC-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 906 ENEVGSSS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 906 ~~~~~~~~-~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.. ....+ ........+.+++.+||+.||++|||++|+++
T Consensus 235 ~~-~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 235 GK-YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp TC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred Cc-cccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00 00000 01122456789999999999999999999985
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-35 Score=327.70 Aligned_cols=252 Identities=21% Similarity=0.311 Sum_probs=189.4
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEc------
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYN------ 757 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~------ 757 (955)
..+|. ..+.||+|+||.||+|+. .+|+.||||++..... ....+.+|++++++++|||||++++++..
T Consensus 16 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYE--KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEE--EEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred cccee--EEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 34566 888999999999999996 6899999999865322 24567789999999999999999999986
Q ss_pred --CCeeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccc
Q 002186 758 --RHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 832 (955)
Q Consensus 758 --~~~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfG 832 (955)
.+..++||||++ |+|.+.+.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 94 RCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp ---CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred cCCceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 346899999997 478777765 568899999999999999999999 99999999999999999999999999
Q ss_pred ccccccccCC------CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC-------------
Q 002186 833 FKYLTQLADG------SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ------------- 892 (955)
Q Consensus 833 l~~~~~~~~~------~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~------------- 892 (955)
+++....... ....++.+|.+||...+ ..++.++||||+||++|||+||+.||.......
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 9876532211 11224566888998765 457899999999999999999999987432110
Q ss_pred --Cccccccccccccccc--cCCCCchHHH------HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 893 --NKPIDGLLGEMYNENE--VGSSSSLQDE------IKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 893 --~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+...... ....... ........+. ...+.+++.+||+.||++|||++|++++
T Consensus 250 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNY-ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGC-GGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccc-hhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00000000 0000000 0001111111 2357899999999999999999999864
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=324.83 Aligned_cols=241 Identities=15% Similarity=0.192 Sum_probs=177.3
Q ss_pred chhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccC-CCCceeEeEEEE--------cCCeeE
Q 002186 694 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVR-HKNLIRLLGFCY--------NRHQAY 762 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~-H~niv~l~g~~~--------~~~~~~ 762 (955)
...+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+..+.+++ |||||++++++. .....+
T Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~ 110 (337)
T 3ll6_A 31 RVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFL 110 (337)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEE
T ss_pred EEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEE
Confidence 3788999999999999994 589999999986543 34567889999999996 999999999994 234589
Q ss_pred EEEeecCCCChhHHhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCC--cccCCCCCCCeeeCCCCCceECcccccc
Q 002186 763 LLYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gl~~lH~~~~~~--iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
+||||+. |+|.+++.. ..++.+...++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++
T Consensus 111 lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 111 LLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred EEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 9999996 799998864 478999999999999999999998 6 9999999999999999999999999987
Q ss_pred cccccCCC--------------CcccccccCchhhh---hccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccc
Q 002186 836 LTQLADGS--------------FPAKIAWTESGEFY---NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG 898 (955)
Q Consensus 836 ~~~~~~~~--------------~~~~~~~~~~~e~~---~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~ 898 (955)
........ ...++..|.+||.. ....++.++|||||||++|||+||+.||.......
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------ 260 (337)
T 3ll6_A 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR------ 260 (337)
T ss_dssp CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH------
Confidence 64332110 11245557888877 45678889999999999999999999987433211
Q ss_pred cccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 899 LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
......... . .. .....+.+++.+||+.||++|||++|+++.|+.+
T Consensus 261 ~~~~~~~~~-~--~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~ 306 (337)
T 3ll6_A 261 IVNGKYSIP-P--HD---TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306 (337)
T ss_dssp -----CCCC-T--TC---CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred hhcCcccCC-c--cc---ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011111100 0 00 1112366788899999999999999999999865
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=320.25 Aligned_cols=246 Identities=17% Similarity=0.258 Sum_probs=185.8
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEc---------
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--------- 757 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--------- 757 (955)
.+.|. ..+.||+|+||.||+|+. .+|+.||||+++......+.+.+|++++++++||||++++++|.+
T Consensus 5 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFE--EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccch--hhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 34566 788999999999999995 589999999997655556778899999999999999999998865
Q ss_pred ----CCeeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECc
Q 002186 758 ----RHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830 (955)
Q Consensus 758 ----~~~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~D 830 (955)
.+..++||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 3568999999999999999975 346788889999999999999999 999999999999999999999999
Q ss_pred ccccccccccC----------------CCCcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCC
Q 002186 831 FGFKYLTQLAD----------------GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 893 (955)
Q Consensus 831 fGl~~~~~~~~----------------~~~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~ 893 (955)
||+++...... .....+...|.+||..... .++.++||||+||++|||+| |+......
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~-- 234 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER-- 234 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH--
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH--
Confidence 99987543211 0111245567888987654 68899999999999999998 44321100
Q ss_pred ccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 894 KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
......+..................+.+++.+||+.||++|||++|++++
T Consensus 235 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 ---VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp ---HHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---HHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 00001110000000011112233456788999999999999999999874
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-35 Score=321.17 Aligned_cols=243 Identities=16% Similarity=0.208 Sum_probs=189.7
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 30 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 30 VFD--VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp CEE--EEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhh--hheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 455 788899999999999985 469999999997543 3456788999999999999999999999999999999999
Q ss_pred CCCChhHHhh---cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--C
Q 002186 769 PNGNLSEKIR---TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--S 843 (955)
Q Consensus 769 ~~gsL~~~l~---~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~ 843 (955)
++|+|.+++. ...++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........ .
T Consensus 107 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (314)
T 3com_A 107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 183 (314)
T ss_dssp TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence 9999999986 3578999999999999999999999 999999999999999999999999999865443211 1
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+...|.+||......++.++|||||||++|||+||+.||........ .........+. ..........+.
T Consensus 184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~l~ 256 (314)
T 3com_A 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA---IFMIPTNPPPT----FRKPELWSDNFT 256 (314)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHHHHSCCCC----CSSGGGSCHHHH
T ss_pred ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHhcCCCcc----cCCcccCCHHHH
Confidence 12245568889998888889999999999999999999999864321110 00000000000 011112234577
Q ss_pred HHHHHccCCCCCCCCCHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+++.+||+.||++|||++|+++
T Consensus 257 ~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 257 DFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHccCChhhCcCHHHHHh
Confidence 8999999999999999999985
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=317.57 Aligned_cols=244 Identities=15% Similarity=0.181 Sum_probs=177.6
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.++...++.++||||+++++++.+++..++||
T Consensus 8 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 8 DLE--PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred hhh--hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 355 788999999999999995 6899999999975422 2334455566688899999999999999999999999
Q ss_pred eecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 766 DYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 766 ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
||++ |+|.+++.. ..++.....++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9997 588887753 5689999999999999999999842 899999999999999999999999999876543
Q ss_pred cCCC-CcccccccCchhhh----hccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCc
Q 002186 840 ADGS-FPAKIAWTESGEFY----NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 914 (955)
Q Consensus 840 ~~~~-~~~~~~~~~~~e~~----~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (955)
.... ...++..|.+||.. ....++.++||||+||++|||+||+.||....... ...............
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~-- 235 (290)
T 3fme_A 163 DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-----QQLKQVVEEPSPQLP-- 235 (290)
T ss_dssp -------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-----HHHHHHHHSCCCCCC--
T ss_pred cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH-----HHHHHHhccCCCCcc--
Confidence 2221 12345568888985 45678889999999999999999999986422111 001111111101000
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 915 LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 915 ~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.......+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0122345778999999999999999999986
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=339.02 Aligned_cols=193 Identities=18% Similarity=0.209 Sum_probs=161.0
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcC-----
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR----- 758 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~----- 758 (955)
.+.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++...
T Consensus 25 ~~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 25 PDNYI--IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CTTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred cCCEE--EEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 34566 888999999999999984 578999999997532 2356788999999999999999999999865
Q ss_pred CeeEEEEeecCCCChhHHhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 759 HQAYLLYDYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
+..|+||||++ |+|.++++.. +++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred CeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 57899999996 6999999863 68899999999999999999999 999999999999999999999999999976
Q ss_pred ccccCC------------------------CCcccccccCchhhh-hccCCcccccchhHHHHHHHHHhCCCCCC
Q 002186 837 TQLADG------------------------SFPAKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTNGRLTN 886 (955)
Q Consensus 837 ~~~~~~------------------------~~~~~~~~~~~~e~~-~~~~~~~~~DV~S~Gvvl~Elltg~~p~~ 886 (955)
...... ....++.+|.+||+. ....++.++||||+||++|||+||..|+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 533211 112356778999975 55678999999999999999998655543
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=319.63 Aligned_cols=250 Identities=19% Similarity=0.235 Sum_probs=186.8
Q ss_pred hcccchhhhccCCCCCceEEEeC--CCCc--EEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL--PTGI--TVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~--~~g~--~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.|. ..+.||+|+||.||+|+. .+++ .||||+++... ...+.+.+|++++++++||||+++++++.+++ .
T Consensus 19 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 19 DLR--LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GEE--EEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred Hee--eeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 355 788999999999999984 3343 69999987532 23567889999999999999999999998765 8
Q ss_pred EEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
++||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 899999999999999965 478899999999999999999999 99999999999999999999999999987654
Q ss_pred ccCCC-----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCC
Q 002186 839 LADGS-----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 839 ~~~~~-----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
..... ...+...|.+||......++.++|||||||++|||+| |+.||...... .....+...... .
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~--~ 244 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------QILHKIDKEGER--L 244 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTSCCC--C
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH------HHHHHHHccCCC--C
Confidence 32211 1123334788898888888999999999999999999 88888643211 011111111000 0
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
+........+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 245 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 11112235677899999999999999999999999987664
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-35 Score=322.77 Aligned_cols=280 Identities=19% Similarity=0.266 Sum_probs=195.4
Q ss_pred CCChhhHHHHHHhhhhC-CCCCCCCCCCCCCCCCCCCCCCCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcC
Q 002186 22 SANDPYSEALLSLKSEL-VDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFF 100 (955)
Q Consensus 22 ~~~~~~~~all~~k~~~-~~~~~~l~~w~~~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l 100 (955)
++..+|++||++||+++ .|+.+.+.+|.... .+..++|.|.|+.|+..... +.....
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~----~~~~~~~~~~g~~~~~~~~~------------------l~~~~~ 80 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQAN----SNNPQIETRTGRALKATADL------------------LEDATQ 80 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHT----TTCTTSCCSHHHHHHHHHHH------------------HHHHTS
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccc----cccccccccCCcchhhhHHH------------------Hhcccc
Confidence 34567899999999999 67777788994210 01357899999999641110 111114
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
.+++.|+|++|.++ .+|..++++++|++|+|++|.++ .+|..|+.+++|++|||++|.++ .+|..++++++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 67889999999998 78888999999999999999998 88989999999999999999998 78989999999999999
Q ss_pred cCCCCcccCCCCcCC---------CCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEe
Q 002186 181 AGSYFSGPIPSQFGS---------FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD 251 (955)
Q Consensus 181 s~n~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ 251 (955)
++|.+.+.+|..++. +++|++|+|++|.++ .+|..++.+++|++|++++|.+.+ +|..++++++|++|+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELD 235 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEE
Confidence 999888888887764 677777777777666 556666666666666666665553 444455555555555
Q ss_pred ccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEeccccc
Q 002186 252 IAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNE 328 (955)
Q Consensus 252 Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 328 (955)
+++|++.+.+|..++.+++|++|++++|.+.+.+|..+..+++|++|+|++|++.+.+|.+++.+++|+.+++..+.
T Consensus 236 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp CTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred CcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHH
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555554443
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=353.03 Aligned_cols=241 Identities=16% Similarity=0.140 Sum_probs=194.1
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+..|.+++..+ +||||+++++++.+.+..|+
T Consensus 342 ~f~--~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 342 DFN--FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp TEE--EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ceE--EEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 355 788999999999999995 578999999997532 2345677888899887 79999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+++|+|.++++. ..++.+...|+.|++.||+|||+. +||||||||+|||++.++.+||+|||+++......
T Consensus 420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 496 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 496 (674)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence 9999999999999975 578889999999999999999999 99999999999999999999999999997532222
Q ss_pred C--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....++++|.+||+.....++.++|||||||++|||+||+.||..... ......+.... ...+. ...
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~-~~~p~---~~s 566 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIMEHN-VAYPK---SMS 566 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHSSC-CCCCT---TSC
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH------HHHHHHHHhCC-CCCCc---cCC
Confidence 1 122366778999999988999999999999999999999999974321 11111222211 11111 223
Q ss_pred HHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSM-----EEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~-----~ev~~ 945 (955)
.++.+++..||+.||++||++ +||.+
T Consensus 567 ~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 567 KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred HHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 457788999999999999997 67764
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=313.87 Aligned_cols=248 Identities=16% Similarity=0.174 Sum_probs=194.0
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.+.+.|. ..+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 19 ~~~~~y~--i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 19 TFAERYN--IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp HHHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHhhcce--eeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 3445676 8889999999999999964 79999999997532 2356788999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC---CCceECccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYL 836 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~DfGl~~~ 836 (955)
++||||+++|+|.+.+.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.+ +.+||+|||++..
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 999999999999998864 568889999999999999999999 99999999999999754 4699999999876
Q ss_pred ccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 837 TQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 837 ~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
....... ...+...|.+||...+ .++.++||||+||++|||+||+.||....... ....+.........+..
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~ 246 (287)
T 2wei_A 174 FQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------ILKRVETGKYAFDLPQW 246 (287)
T ss_dssp BCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCSGGG
T ss_pred ecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHcCCCCCCchhh
Confidence 5433221 1224556788898765 48889999999999999999999986432110 00111111000001111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 247 RTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 122356778999999999999999999997
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-35 Score=333.55 Aligned_cols=252 Identities=19% Similarity=0.190 Sum_probs=193.0
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccC--------CCCceeEeEEEE---
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVR--------HKNLIRLLGFCY--- 756 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~g~~~--- 756 (955)
.+|. ..+.||+|+||+||+|+ ..+|+.||||+++......+.+.+|++++++++ |||||++++++.
T Consensus 37 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 37 GRYH--VIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CeEE--EEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 3455 78899999999999998 467899999999866555677889999999886 788999999988
Q ss_pred -cCCeeEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-------
Q 002186 757 -NRHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM------- 824 (955)
Q Consensus 757 -~~~~~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~------- 824 (955)
.....++||||+ +|++.+.+.. ..++.....|+.|+++||+|||+.+ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhh
Confidence 556899999999 5667666643 3689999999999999999999864 899999999999999775
Q ss_pred ------------------------------------------CceECcccccccccccCCCCcccccccCchhhhhccCC
Q 002186 825 ------------------------------------------EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKE 862 (955)
Q Consensus 825 ------------------------------------------~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 862 (955)
.+||+|||+++....... ...++..|.+||+..+..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~-~~~gt~~y~aPE~~~~~~~ 270 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFT-EDIQTRQYRSLEVLIGSGY 270 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSC-SCCSCGGGCCHHHHHTSCC
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCc-cCCCCCcccCChhhcCCCC
Confidence 799999999876543322 2235667889999988889
Q ss_pred cccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-------cccc--------------ccccc----------ccc--
Q 002186 863 EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-------GLLG--------------EMYNE----------NEV-- 909 (955)
Q Consensus 863 ~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-------~~~~--------------~~~~~----------~~~-- 909 (955)
+.++|||||||++|||+||+.||............ .... ..+.. .+.
T Consensus 271 ~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 1wak_A 271 NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGL 350 (397)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCH
T ss_pred CcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcch
Confidence 99999999999999999999999743322110000 0000 00000 000
Q ss_pred -----CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 910 -----GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 910 -----~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.......+....+.+++.+||+.||++|||++|++++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 351 FEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0001124456678899999999999999999999863
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=331.32 Aligned_cols=251 Identities=20% Similarity=0.266 Sum_probs=176.2
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcC------
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------ 758 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------ 758 (955)
++|. ..+.||+|+||.||+|. ..+|+.||||++.... ...+.+.+|++++++++|||||++++++...
T Consensus 29 ~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 29 ERYQ--NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp TTEE--EEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceE--EeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 4566 78899999999999998 5689999999996532 2356678999999999999999999999754
Q ss_pred CeeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 759 HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
...|+||||+ +++|.++++. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred CeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 5689999999 6899998875 578899999999999999999999 9999999999999999999999999998765
Q ss_pred cccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cc--------c-------
Q 002186 838 QLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL--------L------- 900 (955)
Q Consensus 838 ~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~--------~------- 900 (955)
..... ...++.+|.+||...+ ..++.++||||+||++|||+||+.||.+.......... .. .
T Consensus 183 ~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 261 (367)
T 2fst_X 183 ADEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHH
T ss_pred cccCC-CcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 43221 2235667889998766 67899999999999999999999998754321100000 00 0
Q ss_pred -cccccccccCCCCchH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 901 -GEMYNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 901 -~~~~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.......+........ .....+.+++.+||+.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000000000000011 123457899999999999999999999864
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=335.76 Aligned_cols=188 Identities=21% Similarity=0.269 Sum_probs=148.7
Q ss_pred hhhccCCCCCceEEEeCC---CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEc--CCeeEEEEeecCC
Q 002186 696 CEEAARPQSAAGCKAVLP---TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYDYLPN 770 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ey~~~ 770 (955)
..+||+|+||.||+|+.. +++.||||+++.... .+.+.+|++++++++|||||++++++.. ....++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~- 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-
Confidence 457999999999999854 688999999975432 3457789999999999999999999954 678999999997
Q ss_pred CChhHHhhc-----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee----CCCCCceECcccccc
Q 002186 771 GNLSEKIRT-----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKY 835 (955)
Q Consensus 771 gsL~~~l~~-----------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl----~~~~~~ki~DfGl~~ 835 (955)
|+|.+++.. .+++.....|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 180 (405)
T 3rgf_A 104 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 180 (405)
T ss_dssp EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC
T ss_pred CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCce
Confidence 588888752 267888999999999999999999 99999999999999 778899999999997
Q ss_pred cccccCC-----CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCC
Q 002186 836 LTQLADG-----SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAG 888 (955)
Q Consensus 836 ~~~~~~~-----~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~ 888 (955)
....... ....++.+|.+||+..+ ..++.++||||+||++|||+||+.||...
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 181 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred ecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 6543211 11234666889998876 45899999999999999999999999743
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-35 Score=329.05 Aligned_cols=251 Identities=17% Similarity=0.226 Sum_probs=190.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCee---
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA--- 761 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~--- 761 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++...+..
T Consensus 42 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 42 KTYV--SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccEE--EEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 4465 778899999999999984 5799999999975322 256778999999999999999999999876654
Q ss_pred ---EEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 762 ---YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 762 ---~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
++||||++ |+|.+.+....++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred eeEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999997 799999988899999999999999999999999 99999999999999999999999999987654
Q ss_pred ccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-c--------c--------c
Q 002186 839 LADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-G--------L--------L 900 (955)
Q Consensus 839 ~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~--------~--------~ 900 (955)
..... ..++.+|.+||.... ..++.++||||+||++|||+||+.||............ . . .
T Consensus 196 ~~~~~-~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 274 (371)
T 4exu_A 196 AEMTG-YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 274 (371)
T ss_dssp ----C-TTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHH
T ss_pred cCcCC-cccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhh
Confidence 33222 224566888998776 67899999999999999999999998743211000000 0 0 0
Q ss_pred cccccccccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 901 GEMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 901 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.......+....... ......+.+++.+||+.||++|||++|++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 275 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000000000111 1124568899999999999999999999864
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-35 Score=337.42 Aligned_cols=252 Identities=12% Similarity=0.062 Sum_probs=193.3
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccCCC-CceeEeEEEEcCCeeEEEEe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHK-NLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~-niv~l~g~~~~~~~~~lv~e 766 (955)
+.|. ..+.||+|+||.||+|+ ..+|+.||||+++.... .+.+.+|+++++.++|+ +|..+..++...+..++|||
T Consensus 7 ~~y~--i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 7 NKFR--LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTEE--CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CcEE--EEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 3465 78899999999999999 46899999998865332 23467889999999874 55566666777889999999
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee---CCCCCceECccccccccccc
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DfGl~~~~~~~ 840 (955)
|+ +|+|.+++.. .+++.++..|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 8999999963 678999999999999999999999 99999999999999 58899999999999765433
Q ss_pred CCC---------CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCC
Q 002186 841 DGS---------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 911 (955)
Q Consensus 841 ~~~---------~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (955)
... ...++..|.+||...+..++.++|||||||++|||+||+.||......... ..+..+........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~---~~~~~i~~~~~~~~ 236 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK---QKYEKISEKKVATS 236 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH---HHHHHHHHHHHHSC
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH---HHHHHHhhcccccc
Confidence 211 223556688999999889999999999999999999999999753321110 01111111000000
Q ss_pred CC-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 912 SS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 912 ~~-~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.. .......++.+++..||+.||++||++++|++.|+.+
T Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 00 0011235678999999999999999999999998765
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-35 Score=324.13 Aligned_cols=249 Identities=14% Similarity=0.188 Sum_probs=168.5
Q ss_pred Hhhhcccchh-hhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEc----CCe
Q 002186 687 VLRSFNSTEC-EEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQ 760 (955)
Q Consensus 687 ~~~~~~~~~~-~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~ 760 (955)
+.+.|. .. +.||+|+||.||+|... +|+.||||++....... .+....++.++||||+++++++.. ...
T Consensus 26 ~~~~y~--i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQ--LSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR---QEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEE--EEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHH---HHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeE--ecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHH---HHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 344565 53 46999999999999964 79999999997543222 233334566799999999999876 445
Q ss_pred eEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---CCCceECcccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGF 833 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DfGl 833 (955)
.++||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 8999999999999999976 368889999999999999999999 9999999999999986 45599999999
Q ss_pred cccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 834 KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
++...........++..|.+||+.....++.++||||+||++|||+||+.||.......... ...............+
T Consensus 178 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 178 AKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP--GMKRRIRLGQYGFPNP 255 (336)
T ss_dssp CEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CCCTT
T ss_pred ceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh--hHHHhhhccccccCch
Confidence 87654333333335666888998888888899999999999999999999987433211100 0000000000000011
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
........+.+++.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11223356778999999999999999999997
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=325.71 Aligned_cols=247 Identities=16% Similarity=0.246 Sum_probs=183.1
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcC----------
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR---------- 758 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~---------- 758 (955)
+|. ..+.||+|+||+||+|. ..+|+.||||++..... ...+|++++++++|||||++++++...
T Consensus 8 ~y~--~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 8 KYS--LGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp TEE--EEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred eEE--EEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 455 78899999999999998 46899999999865432 223689999999999999999998542
Q ss_pred ----------------------------CeeEEEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCC
Q 002186 759 ----------------------------HQAYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDC 804 (955)
Q Consensus 759 ----------------------------~~~~lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~ 804 (955)
...++||||++ |+|.+.+.. ..++.....++.|+++||+|||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~- 160 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL- 160 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 34889999998 688887753 568889999999999999999998
Q ss_pred CCCcccCCCCCCCeeeC-CCCCceECcccccccccccCCC-CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhC
Q 002186 805 YPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADGS-FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTN 881 (955)
Q Consensus 805 ~~~iiHrdlk~~NiLl~-~~~~~ki~DfGl~~~~~~~~~~-~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg 881 (955)
+|+||||||+||+++ .++.+||+|||+++........ ...+..+|.+||...+. .++.++||||+||++|||++|
T Consensus 161 --gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g 238 (383)
T 3eb0_A 161 --GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG 238 (383)
T ss_dssp --TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred --cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhC
Confidence 999999999999998 6889999999999765433222 22345668889987654 589999999999999999999
Q ss_pred CCCCCCCCCCCCcccc-cccc-----------ccccccccC--CCCchH-----HHHHHHHHHHHHccCCCCCCCCCHHH
Q 002186 882 GRLTNAGSSLQNKPID-GLLG-----------EMYNENEVG--SSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEE 942 (955)
Q Consensus 882 ~~p~~~~~~~~~~~~~-~~~~-----------~~~~~~~~~--~~~~~~-----~~~~~~~~l~~~Cl~~dp~~RPt~~e 942 (955)
+.||............ .... ..+.....+ ....+. .....+.+++.+||+.||++|||+.|
T Consensus 239 ~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (383)
T 3eb0_A 239 KPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYE 318 (383)
T ss_dssp SCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 9998753321100000 0000 000000000 000111 12345789999999999999999999
Q ss_pred HHH
Q 002186 943 ALK 945 (955)
Q Consensus 943 v~~ 945 (955)
+++
T Consensus 319 ~l~ 321 (383)
T 3eb0_A 319 AMA 321 (383)
T ss_dssp HHT
T ss_pred Hhc
Confidence 985
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=328.93 Aligned_cols=252 Identities=17% Similarity=0.219 Sum_probs=184.9
Q ss_pred hhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccc------------hHHHHHHHHHHHhccCCCCceeEeEEEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT------------RIKIVSEFITRIGTVRHKNLIRLLGFCY 756 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~------------~~~~~~~e~~~l~~l~H~niv~l~g~~~ 756 (955)
+.|. ..+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++|||||++++++.
T Consensus 22 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 99 (362)
T 3pg1_A 22 SPYT--VQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV 99 (362)
T ss_dssp CSCE--EEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred cceE--EeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence 4455 7889999999999999988899999999854211 1367889999999999999999999985
Q ss_pred c-----CCeeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceE
Q 002186 757 N-----RHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828 (955)
Q Consensus 757 ~-----~~~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki 828 (955)
. ....++||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 100 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl 175 (362)
T 3pg1_A 100 HFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITI 175 (362)
T ss_dssp ECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred eccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEE
Confidence 4 336899999998 688888865 368899999999999999999999 9999999999999999999999
Q ss_pred CcccccccccccCCC-CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cc------
Q 002186 829 AEFGFKYLTQLADGS-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL------ 899 (955)
Q Consensus 829 ~DfGl~~~~~~~~~~-~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~------ 899 (955)
+|||+++........ ...++.+|.+||.... ..++.++||||+||++|||+||+.||............ ..
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 255 (362)
T 3pg1_A 176 CDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255 (362)
T ss_dssp CCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH
T ss_pred EecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence 999998754332221 2235566888998765 67889999999999999999999998743211000000 00
Q ss_pred ----------ccccccccccCC-CCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 900 ----------LGEMYNENEVGS-SSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 900 ----------~~~~~~~~~~~~-~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..+......... .... +.....+.+++.+||+.||++|||++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000000000000 0000 1123457899999999999999999999874
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-35 Score=322.62 Aligned_cols=244 Identities=18% Similarity=0.218 Sum_probs=187.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEc------CCe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYN------RHQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~------~~~ 760 (955)
..|. ..+.||+|+||.||+|.. .+|+.||||++.......+.+.+|+++++++ +||||+++++++.. .+.
T Consensus 24 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 24 GIFE--LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred CcEE--EEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 4465 788999999999999995 5899999999986655667888999999998 79999999999986 468
Q ss_pred eEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
.++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 178 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence 8999999999999999974 467888899999999999999999 999999999999999999999999999875
Q ss_pred ccccCC--CCcccccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 837 TQLADG--SFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 837 ~~~~~~--~~~~~~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
...... ....+...|.+||... ...++.++|||||||++|||+||+.||........ .........+. .
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~-~ 254 (326)
T 2x7f_A 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA---LFLIPRNPAPR-L 254 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHHHHSCCCC-C
T ss_pred cCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH---HHHhhcCcccc-C
Confidence 433211 1122455678888875 45678899999999999999999999864321100 00000000000 0
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
... .....+.+++.+||+.||++|||++|+++
T Consensus 255 -~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 255 -KSK---KWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp -SCS---CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -Ccc---ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 011 11245778889999999999999999986
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=323.48 Aligned_cols=251 Identities=18% Similarity=0.222 Sum_probs=190.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCe----
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ---- 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---- 760 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+.++++++|||||++++++...+.
T Consensus 24 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 24 KTYV--SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred ceEE--EeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 3455 778899999999999985 5799999999965322 24567899999999999999999999987654
Q ss_pred --eEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 761 --AYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 761 --~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
.++||||++ |+|.+++....++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred eeEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999997 699999988889999999999999999999999 99999999999999999999999999987644
Q ss_pred ccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-c------------------
Q 002186 839 LADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-G------------------ 898 (955)
Q Consensus 839 ~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~------------------ 898 (955)
.... ...++.+|.+||...+ ..++.++||||+||++|||+||+.||............ .
T Consensus 178 ~~~~-~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 3coi_A 178 AEMT-GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 256 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHH
T ss_pred CCcc-ccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHH
Confidence 3221 1224566888898766 67889999999999999999999998743211000000 0
Q ss_pred --cccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 899 --LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 899 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.......................+.+++.+|++.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 257 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000000000001112234567889999999999999999999864
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=347.77 Aligned_cols=243 Identities=16% Similarity=0.177 Sum_probs=190.6
Q ss_pred hhhhccCCCCCceEEEeCC----CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.||+|+||.||+|... .+..||||+++.... ..+.+.+|+.++++++|||||+++|++. ++..++||||+
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~ 472 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 472 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcC
Confidence 6778999999999999853 356899999875322 3467889999999999999999999985 46789999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
++|+|.++++. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 473 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 549 (656)
T 2j0j_A 473 TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 549 (656)
T ss_dssp TTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCCcceec
Confidence 99999999974 468899999999999999999999 9999999999999999999999999998765332211
Q ss_pred -CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 844 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 844 -~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
...+...|.+||......++.++|||||||++|||+| |..||...... .....+........++ .....
T Consensus 550 ~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~------~~~~~i~~~~~~~~~~---~~~~~ 620 (656)
T 2j0j_A 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN------DVIGRIENGERLPMPP---NCPPT 620 (656)
T ss_dssp ----CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHHTCCCCCCT---TCCHH
T ss_pred cCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHcCCCCCCCc---cccHH
Confidence 1113345888999888889999999999999999998 77787643211 1111111111011111 22346
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+.+++.+||+.||++|||++|+++.|+.+
T Consensus 621 l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 621 LYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 77899999999999999999999999876
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=325.73 Aligned_cols=255 Identities=17% Similarity=0.205 Sum_probs=177.3
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCe----
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ---- 760 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---- 760 (955)
...+.|. ..+.||+|+||.||+|+. .+|+.||||++...........+|++.+++++|||||+++++|...+.
T Consensus 20 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~ 97 (360)
T 3e3p_A 20 KEMDRFQ--VERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRR 97 (360)
T ss_dssp HHHTTEE--EC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTT
T ss_pred hhccceE--EEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccc
Confidence 3345566 888999999999999995 579999999987654444456677888899999999999999975433
Q ss_pred ---eEEEEeecCCCChhHHhh----c--CCCHHHHHHHHHHHHHHHHHHh--cCCCCCcccCCCCCCCeeeCC-CCCceE
Q 002186 761 ---AYLLYDYLPNGNLSEKIR----T--KRDWAAKYKIVLGVARGLCFLH--HDCYPAIPHGDLKASNIVFDE-NMEPHL 828 (955)
Q Consensus 761 ---~~lv~ey~~~gsL~~~l~----~--~~~~~~~~~i~~~ia~gl~~lH--~~~~~~iiHrdlk~~NiLl~~-~~~~ki 828 (955)
.++||||+++ +|.+.+. . ..++.....++.|++.|++||| +. +|+||||||+||+++. ++.+||
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 98 DIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp CEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEE
T ss_pred ceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEE
Confidence 7899999986 5554443 2 4578888899999999999999 66 9999999999999996 899999
Q ss_pred CcccccccccccCCC-CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-c-------
Q 002186 829 AEFGFKYLTQLADGS-FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-G------- 898 (955)
Q Consensus 829 ~DfGl~~~~~~~~~~-~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~------- 898 (955)
+|||+++........ ...++..|.+||+..+. .++.++|||||||++|||+||+.||............ .
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 253 (360)
T 3e3p_A 174 CDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR 253 (360)
T ss_dssp CCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred eeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCH
Confidence 999999765433322 22345668889987554 4899999999999999999999998753321100000 0
Q ss_pred -ccc---------ccccccccC----CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 899 -LLG---------EMYNENEVG----SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 899 -~~~---------~~~~~~~~~----~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
... ......... ...........+.+++.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000 000000000 000001134578899999999999999999999864
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=325.44 Aligned_cols=252 Identities=18% Similarity=0.239 Sum_probs=191.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcC-----Ce
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~ 760 (955)
..|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++... ..
T Consensus 27 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 27 PRYT--NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccEE--EEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3465 888999999999999984 5789999999975332 346788999999999999999999999764 36
Q ss_pred eEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
.++||||++ |+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 899999997 699998875 578999999999999999999999 999999999999999999999999999876543
Q ss_pred cCC-----CCcccccccCchhhhh-ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cccc-----------
Q 002186 840 ADG-----SFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLG----------- 901 (955)
Q Consensus 840 ~~~-----~~~~~~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~~----------- 901 (955)
... ....++.+|.+||... ...++.++||||+||++|||+||+.||............ ....
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 260 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCC
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 221 1123566788899764 445899999999999999999999998754321110000 0000
Q ss_pred -----ccccccccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 902 -----EMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 902 -----~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
......+....... ......+.+++.+||+.||++|||++|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000000000 1123567899999999999999999999863
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=322.11 Aligned_cols=256 Identities=17% Similarity=0.211 Sum_probs=196.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC--CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCC------ceeEeEEEEcCCe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKN------LIRLLGFCYNRHQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~--~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~~~~ 760 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++......+.+.+|++++++++|+| |+++++++.+.+.
T Consensus 14 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 14 ARYE--IVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred CceE--EEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 3465 888999999999999984 47899999999865555677888999998887765 9999999999999
Q ss_pred eEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC--------------
Q 002186 761 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-------------- 822 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-------------- 822 (955)
.++||||+ +|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 8999999975 357888999999999999999999 9999999999999987
Q ss_pred -----CCCceECcccccccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc-c
Q 002186 823 -----NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-I 896 (955)
Q Consensus 823 -----~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~-~ 896 (955)
++.+||+|||+++....... ...++..|.+||...+..++.++||||+||++|||+||+.||.......... .
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 246 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEHHS-TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSCCC-SSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHH
T ss_pred cccccCCCceEeeCcccccCccccc-cccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 66899999999876443222 2235566889999988889999999999999999999999987432111000 0
Q ss_pred ccccc-------------ccccc---cc-----------------cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 002186 897 DGLLG-------------EMYNE---NE-----------------VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 943 (955)
Q Consensus 897 ~~~~~-------------~~~~~---~~-----------------~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev 943 (955)
..... ..... .+ ............++.+++.+||+.||++|||++|+
T Consensus 247 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el 326 (339)
T 1z57_A 247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA 326 (339)
T ss_dssp HHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHH
Confidence 00000 00000 00 00000112345678899999999999999999999
Q ss_pred HHH--hhccC
Q 002186 944 LKL--LSGLK 951 (955)
Q Consensus 944 ~~~--L~~~~ 951 (955)
+++ ++.++
T Consensus 327 l~hp~f~~~~ 336 (339)
T 1z57_A 327 LKHPFFDLLK 336 (339)
T ss_dssp TTSGGGGGGG
T ss_pred hcCHHHHHHh
Confidence 864 45443
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=327.37 Aligned_cols=250 Identities=17% Similarity=0.198 Sum_probs=183.3
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCC------eeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH------QAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------~~~lv~ey~ 768 (955)
..+.||+|+||+||+|+..++..||||++..... ...+|++++++++|||||+++++|...+ ..++||||+
T Consensus 44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 8889999999999999987777799999864322 2236899999999999999999996543 378999999
Q ss_pred CCCChhHHh-----hcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-CCCCceECcccccccccccCC
Q 002186 769 PNGNLSEKI-----RTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 769 ~~gsL~~~l-----~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~DfGl~~~~~~~~~ 842 (955)
+++.+.... ....++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.......
T Consensus 121 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~ 197 (394)
T 4e7w_A 121 PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP 197 (394)
T ss_dssp SEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred CccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC
Confidence 865443332 23568888899999999999999999 999999999999999 789999999999976543322
Q ss_pred C-CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cc--------c----ccccccc
Q 002186 843 S-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL--------L----GEMYNEN 907 (955)
Q Consensus 843 ~-~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~--------~----~~~~~~~ 907 (955)
. ...++.+|.+||...+ ..++.++||||+||++|||++|+.||.+.......... .. . .......
T Consensus 198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~ 277 (394)
T 4e7w_A 198 NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHK 277 (394)
T ss_dssp CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSC
T ss_pred CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhc
Confidence 2 2235667889998765 45899999999999999999999999754321100000 00 0 0000000
Q ss_pred ccC-CCCchH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhcc
Q 002186 908 EVG-SSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGL 950 (955)
Q Consensus 908 ~~~-~~~~~~-----~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~ 950 (955)
... ...... ....++.+++.+||+.||++|||+.|++++ ++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 278 FPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp CCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred cccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 000 000011 123568899999999999999999999974 4444
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=314.35 Aligned_cols=242 Identities=16% Similarity=0.175 Sum_probs=186.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-----chHHHHHHHHHHHhccCCCCceeEeEEEEc--CCe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~ 760 (955)
++|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++||||+++++++.. .+.
T Consensus 5 ~~y~--i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 5 GKYL--MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp CCBC--CCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred ccee--EeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 4455 788999999999999996 578999999997532 235678899999999999999999999853 457
Q ss_pred eEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
.++||||+++| +.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999876 7776653 468889999999999999999999 999999999999999999999999999876
Q ss_pred ccccCC----CCcccccccCchhhhhccC--CcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 837 TQLADG----SFPAKIAWTESGEFYNAMK--EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 837 ~~~~~~----~~~~~~~~~~~~e~~~~~~--~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
...... ....+...|.+||...... .+.++||||+||++|||+||+.||...... .....+.... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~i~~~~-~~ 231 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY------KLFENIGKGS-YA 231 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHCC-CC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH------HHHHHHhcCC-CC
Confidence 432211 1122455678889876543 367899999999999999999998643210 0111111111 11
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
... .....+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 232 IPG---DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCS---SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCC---ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111 122456788999999999999999999964
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=328.20 Aligned_cols=196 Identities=18% Similarity=0.176 Sum_probs=163.8
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccC-CC-----CceeEeEEEEcCCe
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HK-----NLIRLLGFCYNRHQ 760 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~g~~~~~~~ 760 (955)
.++|. ..+.||+|+||+||+|.. .+|+.||||+++......+.+..|+++++.++ |+ +||++++++...+.
T Consensus 53 ~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 53 MDRYE--IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp TTTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeEE--EEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 44566 788999999999999985 47899999999865545566777888887775 44 49999999999999
Q ss_pred eEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC--CCCCceECccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--ENMEPHLAEFGFK 834 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~--~~~~~ki~DfGl~ 834 (955)
.++||||++ |+|.+++.. ..++.....++.|++.||+|||.+ ..+|+||||||+|||++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999996 699999975 368999999999999999999953 23899999999999994 5788999999999
Q ss_pred ccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCC
Q 002186 835 YLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 888 (955)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~ 888 (955)
+....... ...++..|.+||+..+..++.++|||||||++|||+||+.||...
T Consensus 209 ~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQRIY-QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCCCC-SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecccccc-cccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 76543222 223556688999998888999999999999999999999998743
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-35 Score=319.09 Aligned_cols=252 Identities=29% Similarity=0.406 Sum_probs=210.6
Q ss_pred CCCcEEECCCCcCcc--cCCccccCCCCCCEEEccC-CcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceE
Q 002186 101 NELVDLNLSHNSFSG--QFPVEIFNLTSLISLDISR-NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~ 177 (955)
.+++.|+|++|.++| .+|..|.++++|++|+|++ |.+.+.+|..|+.+++|++|+|++|.+++.+|..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 468889999999988 8888888888888888884 8888888888888888888888888777777777777777777
Q ss_pred EEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCC-CCcEEeccCCC
Q 002186 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMS-EVQYLDIAGAN 256 (955)
Q Consensus 178 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~-~L~~L~Ls~n~ 256 (955)
|+|++|.+++.+|..|+++++|++|+|++|.+++.+|.. +++++ +|++|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~------------------------l~~l~~~L~~L~L~~N~ 185 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS------------------------YGSFSKLFTSMTISRNR 185 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGG------------------------GGCCCTTCCEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHH------------------------HhhhhhcCcEEECcCCe
Confidence 777777777777777777777777777777666555544 44554 66666667777
Q ss_pred CCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccc
Q 002186 257 LSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336 (955)
Q Consensus 257 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 336 (955)
+++.+|..+..++ |++|++++|++++..|..|..+++|+.|+|++|++++.+|. +..+++|++|++++|++++.+|..
T Consensus 186 l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 263 (313)
T 1ogq_A 186 LTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQG 263 (313)
T ss_dssp EEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGG
T ss_pred eeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChH
Confidence 7777777777776 99999999999999999999999999999999999987765 889999999999999999999999
Q ss_pred cCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCc-ccc
Q 002186 337 LVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN-FNG 379 (955)
Q Consensus 337 l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~-l~g 379 (955)
+..+++|+.|++++|+++|.+|.. +.+++|+.+++++|. +.|
T Consensus 264 l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 264 LTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp GGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred HhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 999999999999999999999987 889999999999998 555
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-35 Score=322.56 Aligned_cols=245 Identities=18% Similarity=0.257 Sum_probs=185.1
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|...+ .||||+++... ...+.+.+|++++++++||||+++++++.+++..++||||+++|
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 37 IGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred EeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCC
Confidence 77899999999999998743 49999987532 22345678899999999999999999999999999999999999
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC-------
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD------- 841 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~------- 841 (955)
+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||+++......
T Consensus 115 ~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~ 190 (319)
T 2y4i_B 115 TLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDK 190 (319)
T ss_dssp EHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----------CCS
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccccccccccc
Confidence 99999976 367889999999999999999999 999999999999998 6799999999976542111
Q ss_pred CCCcccccccCchhhhhc---------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCC
Q 002186 842 GSFPAKIAWTESGEFYNA---------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~~---------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
.....++..|.+||.... ..++.++|||||||++|||+||+.||....... .. ........+. .. .
T Consensus 191 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~-~~~~~~~~~~-~~-~ 265 (319)
T 2y4i_B 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--II-WQMGTGMKPN-LS-Q 265 (319)
T ss_dssp CBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH--HH-HHHHTTCCCC-CC-C
T ss_pred cccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HH-HHhccCCCCC-CC-c
Confidence 111224556788888764 346888999999999999999999986432110 00 0000001111 00 0
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
. ....++.+++.+||+.||++|||++|++++|+.+...
T Consensus 266 ~---~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 266 I---GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp S---SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred C---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 0 1123467888999999999999999999999987643
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=317.96 Aligned_cols=249 Identities=19% Similarity=0.267 Sum_probs=182.1
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEE----------
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCY---------- 756 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~---------- 756 (955)
.+|. ..+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++++++|||||++++++.
T Consensus 11 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 11 SRYM--DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTEE--EEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred Ccee--EEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 3455 7889999999999999965 69999999987543 34567889999999999999999999884
Q ss_pred ----cCCeeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-CCCCceECc
Q 002186 757 ----NRHQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAE 830 (955)
Q Consensus 757 ----~~~~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~D 830 (955)
+.+..++||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++ .++.+||+|
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 3467899999998 699999976 567888899999999999999999 999999999999997 567999999
Q ss_pred ccccccccccCC-----CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccc---
Q 002186 831 FGFKYLTQLADG-----SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLG--- 901 (955)
Q Consensus 831 fGl~~~~~~~~~-----~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~--- 901 (955)
||+++....... ....+..+|.+||.... ..++.++|||||||++|||+||+.||........ ......
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~ 242 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ--MQLILESIP 242 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHSC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcC
Confidence 999876532211 11123556788887654 6788999999999999999999999874432110 000000
Q ss_pred --------cc-------ccccccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 902 --------EM-------YNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 902 --------~~-------~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+. ............ .....++.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00 000000000000 112456789999999999999999999986
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=328.43 Aligned_cols=246 Identities=19% Similarity=0.209 Sum_probs=181.6
Q ss_pred chhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcC----C--eeEEEEe
Q 002186 694 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR----H--QAYLLYD 766 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~----~--~~~lv~e 766 (955)
...+.||+|+||.||+|+. .+|+.||||++.... +...+|++++++++|||||+++++|... + ..++|||
T Consensus 57 ~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e 133 (420)
T 1j1b_A 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 133 (420)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred EeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence 3788999999999999996 579999999986532 2234689999999999999999998642 2 3679999
Q ss_pred ecCCCChhHHhh------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC-CCceECcccccccccc
Q 002186 767 YLPNGNLSEKIR------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQL 839 (955)
Q Consensus 767 y~~~gsL~~~l~------~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~-~~~ki~DfGl~~~~~~ 839 (955)
|+++ ++.+.+. ..+++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++....
T Consensus 134 ~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 134 YVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred cccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 9985 6766654 2568888999999999999999998 99999999999999965 5689999999976543
Q ss_pred cCCC-CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc-cc--------ccccc---cc
Q 002186 840 ADGS-FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DG--------LLGEM---YN 905 (955)
Q Consensus 840 ~~~~-~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~-~~--------~~~~~---~~ 905 (955)
.... ...++.+|.+||+..+. .++.++|||||||++|||+||+.||........... .. .+..+ +.
T Consensus 210 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~ 289 (420)
T 1j1b_A 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 289 (420)
T ss_dssp TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCC
T ss_pred CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence 2221 22356678899987654 789999999999999999999999875432110000 00 00000 00
Q ss_pred ccccCC--CCchH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 906 ENEVGS--SSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 906 ~~~~~~--~~~~~-----~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+. ...+. ....++.+++.+||+.||++|||+.|++++
T Consensus 290 ~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 290 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 000000 00011 123568899999999999999999999863
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=324.38 Aligned_cols=252 Identities=19% Similarity=0.216 Sum_probs=189.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcC-----Ce
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~ 760 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ....+.+|++++++++|||||++++++... ..
T Consensus 11 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 11 SDFQ--LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cceE--EeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 4466 788999999999999995 5799999999964322 345678899999999999999999998764 67
Q ss_pred eEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
.++||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 899999997 699998875 578999999999999999999999 999999999999999999999999999876432
Q ss_pred cCCC------------CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc------------
Q 002186 840 ADGS------------FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK------------ 894 (955)
Q Consensus 840 ~~~~------------~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~------------ 894 (955)
.... ...++..|.+||.... ..++.++||||+||++|||++|+.||.........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCS
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCch
Confidence 2110 1124556788887654 67889999999999999999999998743210000
Q ss_pred --cc----cccccccccccccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 895 --PI----DGLLGEMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 895 --~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.. .....+.....+....... +.....+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp TTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 0000000000000000000 1223567789999999999999999999873
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=318.74 Aligned_cols=243 Identities=18% Similarity=0.192 Sum_probs=169.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHH-HHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFIT-RIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|+||.||+|.. .+|+.||||+++.... ....+..|+. +++.++|||||++++++.+++..++||||+++
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~ 105 (327)
T 3aln_A 26 DLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST 105 (327)
T ss_dssp C-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred ehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC
Confidence 778899999999999996 5899999999975432 2334444444 77889999999999999999999999999984
Q ss_pred CChhHHhh-------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 771 GNLSEKIR-------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 771 gsL~~~l~-------~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
+|.+++. ...++.....++.|+++||+|||+. ++|+||||||+||+++.++.+||+|||+++........
T Consensus 106 -~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 182 (327)
T 3aln_A 106 -SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182 (327)
T ss_dssp -EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred -ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceeccccccc
Confidence 8887775 2567888999999999999999984 27999999999999999999999999998765432221
Q ss_pred -CcccccccCchhhh----hccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCC-CCchHH
Q 002186 844 -FPAKIAWTESGEFY----NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS-SSSLQD 917 (955)
Q Consensus 844 -~~~~~~~~~~~e~~----~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 917 (955)
...++..|.+||.. ....++.++|||||||++|||+||+.||.......... ........... ......
T Consensus 183 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 257 (327)
T 3aln_A 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL-----TQVVKGDPPQLSNSEERE 257 (327)
T ss_dssp -----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCCCSCCCCCCCCSSCC
T ss_pred ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH-----HHHhcCCCCCCCCccccc
Confidence 12345567888887 45568889999999999999999999987432211111 11111100000 000111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....+.+++.+||+.||++|||++|+++
T Consensus 258 ~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 258 FSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 2345778999999999999999999975
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-34 Score=327.69 Aligned_cols=240 Identities=18% Similarity=0.187 Sum_probs=180.0
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
..+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+++..++|||||. |+|
T Consensus 19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEEECSTTCEEEEEESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 45789999999998776678999999998743 234567899999876 89999999999999999999999995 799
Q ss_pred hHHhhcCCC---------HHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC-------------CCceECcc
Q 002186 774 SEKIRTKRD---------WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-------------MEPHLAEF 831 (955)
Q Consensus 774 ~~~l~~~~~---------~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~-------------~~~ki~Df 831 (955)
.+++..... +.....++.|++.||+|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 999976321 123467999999999999999 99999999999999654 48999999
Q ss_pred cccccccccCCC------CcccccccCchhhhhc-------cCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccc
Q 002186 832 GFKYLTQLADGS------FPAKIAWTESGEFYNA-------MKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPID 897 (955)
Q Consensus 832 Gl~~~~~~~~~~------~~~~~~~~~~~e~~~~-------~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~ 897 (955)
|+++........ ...++..|.+||+..+ ..++.++|||||||++|||+| |+.||....... .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~----~ 248 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE----S 248 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH----H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH----H
Confidence 999765433211 1235666889998865 568899999999999999999 888875332111 0
Q ss_pred ccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 898 GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
............. .........++.+++.+||+.||++|||+.||++
T Consensus 249 ~i~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 249 NIIRGIFSLDEMK-CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHTCCCCCCCT-TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHhcCCCCccccc-ccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111111111010 1112345567889999999999999999999986
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=315.41 Aligned_cols=252 Identities=20% Similarity=0.269 Sum_probs=187.2
Q ss_pred hhcccchhhhccCCCCCceEEEeC--CCCcEEEEEEeecccc---hHHHHHHHHHHHhcc---CCCCceeEeEEEE----
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGAT---RIKIVSEFITRIGTV---RHKNLIRLLGFCY---- 756 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~--~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l---~H~niv~l~g~~~---- 756 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ....+.+|+++++++ +||||++++++|.
T Consensus 11 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 11 QQYE--CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GTEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred hcee--eeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 3455 888999999999999986 5789999999975322 123455666666655 8999999999997
Q ss_pred -cCCeeEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcc
Q 002186 757 -NRHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 831 (955)
Q Consensus 757 -~~~~~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~Df 831 (955)
.....++||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecC
Confidence 4567899999998 699999875 268889999999999999999999 9999999999999999999999999
Q ss_pred cccccccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Ccc
Q 002186 832 GFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKP 895 (955)
Q Consensus 832 Gl~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~ 895 (955)
|+++....... ....+...|.+||......++.++|||||||++|||+||+.||....... .|.
T Consensus 165 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 244 (326)
T 1blx_A 165 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244 (326)
T ss_dssp CSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred cccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCc
Confidence 99876432221 11224556888999888889999999999999999999999987432110 000
Q ss_pred ccccc-ccccccccc-CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 896 IDGLL-GEMYNENEV-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 896 ~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..... ......... ............+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 000000000 0000011223457789999999999999999999963
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-33 Score=313.73 Aligned_cols=337 Identities=21% Similarity=0.248 Sum_probs=200.1
Q ss_pred CCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEE
Q 002186 171 QLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYL 250 (955)
Q Consensus 171 ~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L 250 (955)
.+.+|++|++++|.++...+..|.++++|++|+|++|.+++..+..+..+++|++|++++|.+.+..|..++++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 35677777777777765444446677777777777777765555555555555555555555554444444445555555
Q ss_pred eccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCC
Q 002186 251 DIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (955)
Q Consensus 251 ~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (955)
++++|.++ ...+..|..+++|++|++++|++++..|..|..+++|+.|++++|+++
T Consensus 123 ~L~~n~l~------------------------~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 123 VLERNDLS------------------------SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp ECCSSCCC------------------------CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCS
T ss_pred ECCCCccC------------------------cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCC
Confidence 55554444 333333344444444444444444444444445555555555555444
Q ss_pred CCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCcc
Q 002186 331 GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLS 410 (955)
Q Consensus 331 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~ 410 (955)
+. .+..+++|+.|++++|.+++. ....+|+.|++++|.+... |..
T Consensus 179 ~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~-------------------------- 223 (390)
T 3o6n_A 179 HV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP-------------------------- 223 (390)
T ss_dssp BC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--------------------------
T ss_pred cc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc--------------------------
Confidence 32 123345555555555555431 1223566666666655422 211
Q ss_pred CCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCcccc
Q 002186 411 NCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQN 490 (955)
Q Consensus 411 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~ 490 (955)
..++|+.|++++|++++. ..+..+++|++|++++|.+++..|..+..+++|++|++++| .+
T Consensus 224 ~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n-~l---------------- 284 (390)
T 3o6n_A 224 VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN-RL---------------- 284 (390)
T ss_dssp CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSS-CC----------------
T ss_pred ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCC-cC----------------
Confidence 124566666666666543 35666666666666666666655555555555555555555 11
Q ss_pred ccCcccccCCCCCCCCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCc
Q 002186 491 FSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLS 570 (955)
Q Consensus 491 l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 570 (955)
+ .+|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+++
T Consensus 285 -------------------------------~-~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~ 331 (390)
T 3o6n_A 285 -------------------------------V-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV 331 (390)
T ss_dssp -------------------------------C-EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC
T ss_pred -------------------------------c-ccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccc
Confidence 1 12333455677888888888887 56667888899999999999998
Q ss_pred cccCCCcCCCCCCcEEECCCCcceeccCCcccccccCCCccCCCCCCCCCCC
Q 002186 571 GQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSAYAGNPKLCGAPL 622 (955)
Q Consensus 571 ~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lcg~~l 622 (955)
... +..+++|++|++++|++++... ...+..+....+.+++..|..+.
T Consensus 332 ~~~---~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~c~~~~ 379 (390)
T 3o6n_A 332 TLK---LSTHHTLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQHCKIDY 379 (390)
T ss_dssp CCC---CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCSCCCTTC
T ss_pred eeC---chhhccCCEEEcCCCCccchhH-HHHHHHHHhhcccccCceecccc
Confidence 653 6778899999999999987533 23455556666778888887543
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=319.53 Aligned_cols=237 Identities=16% Similarity=0.145 Sum_probs=188.8
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc-------hHHHHHHHHHHHhccC--CCCceeEeEEEEcC
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVR--HKNLIRLLGFCYNR 758 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~-------~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~ 758 (955)
+.|. ..+.||+|+||.||+|+ ..+|+.||||+++.... ..+.+.+|++++++++ ||||+++++++.++
T Consensus 43 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 43 SQYQ--VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp TTEE--EEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred CceE--EEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 3455 78899999999999998 46899999999975421 1244667899999986 59999999999999
Q ss_pred CeeEEEEeecCC-CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-CCCCceECccccc
Q 002186 759 HQAYLLYDYLPN-GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFK 834 (955)
Q Consensus 759 ~~~~lv~ey~~~-gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~DfGl~ 834 (955)
+..++||||+.+ ++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++ .++.+||+|||++
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 999999999986 899999875 568888999999999999999999 999999999999999 7889999999998
Q ss_pred ccccccCCCCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 835 YLTQLADGSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
+...........++..|.+||+.....+ +.++|||||||++|||+||+.||..... ..... .....
T Consensus 198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------------~~~~~-~~~~~ 264 (320)
T 3a99_A 198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQ-VFFRQ 264 (320)
T ss_dssp EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------------HHHCC-CCCSS
T ss_pred cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------------hhccc-ccccc
Confidence 7654332222335566888898876655 6789999999999999999999863211 00000 00011
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
. ...++.+++.+||+.||++|||++|+++.
T Consensus 265 ~---~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 265 R---VSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp C---CCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred c---CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 12456788999999999999999999873
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=312.18 Aligned_cols=231 Identities=16% Similarity=0.207 Sum_probs=175.0
Q ss_pred hhhHhhhcccchh-hhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHH-hccCCCCceeEeEEEEc---
Q 002186 684 ANDVLRSFNSTEC-EEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRI-GTVRHKNLIRLLGFCYN--- 757 (955)
Q Consensus 684 ~~~~~~~~~~~~~-~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~g~~~~--- 757 (955)
..++.+.|. .. +.||+|+||.||+|.. .+|+.||||+++.. ..+.+|++++ +..+||||+++++++..
T Consensus 12 ~~~~~~~y~--~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 85 (299)
T 3m2w_A 12 KNAIIDDYK--VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYA 85 (299)
T ss_dssp CSCGGGTEE--EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred ccccccchh--hcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHHhhhhhhcC
Confidence 344555565 54 6799999999999985 68999999999642 3456777777 56689999999999876
Q ss_pred -CCeeEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---CCCceEC
Q 002186 758 -RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLA 829 (955)
Q Consensus 758 -~~~~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~ 829 (955)
.+..++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp TEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred CCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEe
Confidence 6678999999999999999975 368889999999999999999999 9999999999999998 7889999
Q ss_pred cccccccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 830 EFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 830 DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
|||++.... ...++.++||||+||++|||+||+.||.......... .......... .
T Consensus 163 Dfg~a~~~~--------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~--~~~~~~~~~~-~ 219 (299)
T 3m2w_A 163 DFGFAKETT--------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--GMKTRIRMGQ-Y 219 (299)
T ss_dssp CCTTCEECT--------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C--CSCCSSCTTC-C
T ss_pred ccccccccc--------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH--HHHHHHhhcc-c
Confidence 999985432 1235667899999999999999999997433211100 0000110000 0
Q ss_pred CCC-CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 910 GSS-SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 910 ~~~-~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
... +........+.+++.+||+.||++|||++|++++
T Consensus 220 ~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 220 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000 0011234567889999999999999999999863
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=313.46 Aligned_cols=241 Identities=16% Similarity=0.154 Sum_probs=185.4
Q ss_pred cccchhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccC--CCCceeEeEEEEcCCeeEEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVR--HKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lv~ 765 (955)
|. ..+.||+|+||.||+|...+|+.||||++.... ...+.+.+|++++++++ ||||+++++++.+++..++||
T Consensus 30 y~--~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 30 YS--ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EE--EEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred EE--EEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 55 788999999999999999899999999996532 23567889999999997 499999999999999999999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
| +.+|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||++++ +.+||+|||+++........
T Consensus 108 e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 108 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp C-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred e-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 9 567899999975 467888999999999999999999 9999999999999964 88999999998765432211
Q ss_pred ----CcccccccCchhhhhc-----------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccc
Q 002186 844 ----FPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE 908 (955)
Q Consensus 844 ----~~~~~~~~~~~e~~~~-----------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (955)
...+...|.+||.... ..++.++|||||||++|||+||+.||....... .......++..
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-----~~~~~~~~~~~ 257 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-----SKLHAIIDPNH 257 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-----HHHHHHHCTTS
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH-----HHHHHHHhccc
Confidence 1224566788888764 467889999999999999999999986432110 01111111110
Q ss_pred c-CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 909 V-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 909 ~-~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
. ..... ....+.+++.+||+.||++|||++|+++.
T Consensus 258 ~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 258 EIEFPDI---PEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp CCCCCCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccCCccc---chHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0 00111 12456788899999999999999999863
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=323.27 Aligned_cols=251 Identities=15% Similarity=0.167 Sum_probs=190.5
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccC-----------CCCceeEeEEEEc
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----------HKNLIRLLGFCYN 757 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~g~~~~ 757 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||++.......+.+.+|++++++++ ||||+++++++..
T Consensus 20 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 20 RYI--LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred eEE--EEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 355 788999999999999994 68999999999866555677888999988876 8999999999886
Q ss_pred CC----eeEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC------CC
Q 002186 758 RH----QAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD------EN 823 (955)
Q Consensus 758 ~~----~~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~------~~ 823 (955)
.+ ..++||||+ +|+|.+++.. ..++.....++.|++.||+|||+.+ +|+||||||+||+++ ..
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCc
Confidence 44 789999999 8999999864 3688899999999999999999853 899999999999994 44
Q ss_pred CCceECcccccccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccc
Q 002186 824 MEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEM 903 (955)
Q Consensus 824 ~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~ 903 (955)
+.+||+|||+++....... ...++..|.+||...+..++.++|||||||++|||+||+.||..............+..+
T Consensus 175 ~~~kl~Dfg~a~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEHYT-NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253 (373)
T ss_dssp EEEEECCCTTCEETTBCCC-SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHH
T ss_pred ceEEEcccccccccCCCCC-CCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHH
Confidence 5799999999876543322 223556688999998888999999999999999999999999743211100000000000
Q ss_pred ---------------------ccc----------cc-------cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 904 ---------------------YNE----------NE-------VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 904 ---------------------~~~----------~~-------~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+.. .. .............+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred HHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 000 00 0000112345677889999999999999999999987
Q ss_pred H
Q 002186 946 L 946 (955)
Q Consensus 946 ~ 946 (955)
+
T Consensus 334 h 334 (373)
T 1q8y_A 334 H 334 (373)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=333.06 Aligned_cols=308 Identities=15% Similarity=0.114 Sum_probs=265.8
Q ss_pred CCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEE
Q 002186 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (955)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 202 (955)
.+++++.|++++|.+....+..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46899999999999998777778999999999999999999888899999999999999999999888899999999999
Q ss_pred EccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccccc
Q 002186 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (955)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 282 (955)
+|++|.+++..+..++.+++|++|++++|.+.+..|..++++++|++|++++|.+++.. ++.+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99999999766666799999999999999999988888999999999999999998753 556788999999999887
Q ss_pred ccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccC
Q 002186 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362 (955)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 362 (955)
+. ....+|+.|++++|.++...+ .+ .++|+.|++++|.+++ +..+..+++|+.|++++|.+++..|..++
T Consensus 206 ~l-----~~~~~L~~L~ls~n~l~~~~~-~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 206 TL-----AIPIAVEELDASHNSINVVRG-PV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp EE-----ECCTTCSEEECCSSCCCEEEC-SC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred cc-----cCCchhheeeccCCccccccc-cc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 53 345678999999999875433 22 3678999999999886 36788888899999999998888888888
Q ss_pred CCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEE
Q 002186 363 RNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYI 442 (955)
Q Consensus 363 ~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 442 (955)
.+++|+.|++++|.+++ +| ..+..+++|+.|+|++|+++ .+|..+..+++|++|
T Consensus 276 ~l~~L~~L~Ls~N~l~~-l~------------------------~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L 329 (597)
T 3oja_B 276 KMQRLERLYISNNRLVA-LN------------------------LYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 329 (597)
T ss_dssp TCSSCCEEECTTSCCCE-EE------------------------CSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred CccCCCEEECCCCCCCC-CC------------------------cccccCCCCcEEECCCCCCC-ccCcccccCCCCCEE
Confidence 88888888888888764 23 23455789999999999999 678888999999999
Q ss_pred ECCCCcCCCCCCcchhhccCCcccccCCCC
Q 002186 443 DLSRNGFTGGIPTDINQASKLEYFNVSNNP 472 (955)
Q Consensus 443 ~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~ 472 (955)
+|++|++++. | +..+++|++|++++|+
T Consensus 330 ~L~~N~l~~~-~--~~~~~~L~~L~l~~N~ 356 (597)
T 3oja_B 330 YLDHNSIVTL-K--LSTHHTLKNLTLSHND 356 (597)
T ss_dssp ECCSSCCCCC-C--CCTTCCCSEEECCSSC
T ss_pred ECCCCCCCCc-C--hhhcCCCCEEEeeCCC
Confidence 9999999865 3 6677899999999994
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=311.68 Aligned_cols=244 Identities=15% Similarity=0.168 Sum_probs=171.2
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccch---HHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||++...... .+.+.++..+++.++||||+++++++.+++..++||
T Consensus 26 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 26 DLE--NLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GEE--EEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred ccc--ccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 455 778899999999999996 48999999999754322 334555566788899999999999999999999999
Q ss_pred eecCCCChhHHhh---cCCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 766 DYLPNGNLSEKIR---TKRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 766 ey~~~gsL~~~l~---~~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||+ ++.+..+.. ...++.....++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 455555443 356888899999999999999998 5 89999999999999999999999999986543322
Q ss_pred CC-CcccccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 842 GS-FPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 842 ~~-~~~~~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
.. ...+...|.+||... ...++.++|||||||++|||+||+.||....... ............. .+..
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~~~-~~~~ 253 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF-----EVLTKVLQEEPPL-LPGH 253 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH-----HHHHHHHHSCCCC-CCSS
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH-----HHHHHHhccCCCC-CCcc
Confidence 11 122455578888874 4567889999999999999999999986432111 0111111111000 0100
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 254 MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 112345778889999999999999999985
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-34 Score=325.75 Aligned_cols=239 Identities=17% Similarity=0.181 Sum_probs=175.4
Q ss_pred chhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 694 TECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
...+.||+|+||+||.....+|+.||||++..... +.+.+|+++++++ +|||||++++++.+.+..|+|||||+ |+
T Consensus 27 ~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~ 103 (432)
T 3p23_A 27 CPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-AT 103 (432)
T ss_dssp EEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred ecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CC
Confidence 37789999999996655556899999999964322 2345789999988 79999999999999999999999996 69
Q ss_pred hhHHhhcC---CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-----CCCCceECcccccccccccCC--
Q 002186 773 LSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-----ENMEPHLAEFGFKYLTQLADG-- 842 (955)
Q Consensus 773 L~~~l~~~---~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-----~~~~~ki~DfGl~~~~~~~~~-- 842 (955)
|.+++... ..+.+...++.|+++||+|||+. +|+||||||+||+++ ....+||+|||+++.......
T Consensus 104 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~ 180 (432)
T 3p23_A 104 LQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180 (432)
T ss_dssp HHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-------
T ss_pred HHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcce
Confidence 99999763 23445678999999999999999 999999999999994 334688999999876543221
Q ss_pred ---CCcccccccCchhhhh---ccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 843 ---SFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 843 ---~~~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
....++.+|.+||+.. ...++.++||||+||++|||+| |..||....... ........ ..... ...
T Consensus 181 ~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~---~~~~~~~~-~~~~~---~~~ 253 (432)
T 3p23_A 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ---ANILLGAC-SLDCL---HPE 253 (432)
T ss_dssp -----CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH---HHHHTTCC-CCTTS---CTT
T ss_pred eeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH---HHHHhccC-Ccccc---Ccc
Confidence 1122566788899886 4567789999999999999999 777764321110 00000000 00001 111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+.+++.+||+.||++|||++||++
T Consensus 254 ~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 254 KHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 123345778999999999999999999984
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=315.91 Aligned_cols=238 Identities=16% Similarity=0.151 Sum_probs=182.8
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-------hHHHHHHHHHHHhcc----CCCCceeEeEEE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTV----RHKNLIRLLGFC 755 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-------~~~~~~~e~~~l~~l----~H~niv~l~g~~ 755 (955)
.+.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ....+.+|++++.++ +||||+++++++
T Consensus 30 ~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 30 EAEYR--LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp ---CE--EEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhceE--EeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 34566 788999999999999985 5789999999965322 122345688888888 899999999999
Q ss_pred EcCCeeEEEEee-cCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-CCCCceECcc
Q 002186 756 YNRHQAYLLYDY-LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEF 831 (955)
Q Consensus 756 ~~~~~~~lv~ey-~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~Df 831 (955)
.+.+..++|||| +++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~df 184 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDF 184 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEEc
Confidence 999999999999 789999999975 478999999999999999999999 999999999999999 8899999999
Q ss_pred cccccccccCCCCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 832 GFKYLTQLADGSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 832 Gl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
|+++...........+...|.+||+.....+ +.++||||+||++|||+||+.||..... ..... ..
T Consensus 185 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------------~~~~~-~~ 251 (312)
T 2iwi_A 185 GSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------------ILEAE-LH 251 (312)
T ss_dssp SSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------------HHHTC-CC
T ss_pred chhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------------Hhhhc-cC
Confidence 9987654433222334556888898766555 4589999999999999999999863211 00000 00
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
... .....+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 252 FPA---HVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp CCT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred Ccc---cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011 122456788999999999999999999973
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=316.70 Aligned_cols=250 Identities=16% Similarity=0.170 Sum_probs=190.9
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCC-cEEEEEEeecccchHHHHHHHHHHHhccCCCC------ceeEeEEEEcCCe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTG-ITVSVKKIEWGATRIKIVSEFITRIGTVRHKN------LIRLLGFCYNRHQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g-~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~~~~ 760 (955)
++|. ..+.||+|+||+||+|.. .+| +.||||+++......+.+.+|++++++++|++ ++.+.+++...+.
T Consensus 19 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 19 ERYE--IVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred ccEE--EEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 4466 788999999999999985 344 78999999865555677888999999988776 9999999999999
Q ss_pred eEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee----------------
Q 002186 761 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---------------- 820 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---------------- 820 (955)
.++||||+ +|++.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 6677777754 368899999999999999999998 99999999999999
Q ss_pred ---CCCCCceECcccccccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc
Q 002186 821 ---DENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID 897 (955)
Q Consensus 821 ---~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~ 897 (955)
+.++.+||+|||+++....... ...++..|.+||...+..++.++||||+||++|||+||+.||............
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEHHT-TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCC-SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred ccccCCCcEEEeecCcccccccccc-CCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 5678999999999876443322 223556688999998888999999999999999999999998743211100000
Q ss_pred -ccccc-------------c-ccccc-c------------------CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 002186 898 -GLLGE-------------M-YNENE-V------------------GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 943 (955)
Q Consensus 898 -~~~~~-------------~-~~~~~-~------------------~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev 943 (955)
..... . ..... . ............+.+++.+||+.||++|||++|+
T Consensus 252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~ 331 (355)
T 2eu9_A 252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA 331 (355)
T ss_dssp HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence 00000 0 00000 0 0000011234578899999999999999999999
Q ss_pred HH
Q 002186 944 LK 945 (955)
Q Consensus 944 ~~ 945 (955)
++
T Consensus 332 l~ 333 (355)
T 2eu9_A 332 LL 333 (355)
T ss_dssp TT
T ss_pred hc
Confidence 85
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-32 Score=303.37 Aligned_cols=302 Identities=25% Similarity=0.330 Sum_probs=182.0
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+++|++|++++|.+.. +| .+..+++|++|++++|.+++..+ +..+++|++|++++|.++. + +.+.++++|++|+
T Consensus 43 l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~ 116 (347)
T 4fmz_A 43 LESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELY 116 (347)
T ss_dssp HTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEE
T ss_pred cccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEE
Confidence 4555666666655543 22 25555566666666655553322 5555555555555555553 2 2355555555555
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++..+ +..+++|++|++++|.... .++. +.++++|++|++++|.+.+
T Consensus 117 l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~------------------------~~~~-~~~l~~L~~L~l~~~~~~~ 169 (347)
T 4fmz_A 117 LNEDNISDISP--LANLTKMYSLNLGANHNLS------------------------DLSP-LSNMTGLNYLTVTESKVKD 169 (347)
T ss_dssp CTTSCCCCCGG--GTTCTTCCEEECTTCTTCC------------------------CCGG-GTTCTTCCEEECCSSCCCC
T ss_pred CcCCcccCchh--hccCCceeEEECCCCCCcc------------------------cccc-hhhCCCCcEEEecCCCcCC
Confidence 55555543222 4555555555555553332 2222 4555555666666655554
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..
T Consensus 170 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~ 241 (347)
T 4fmz_A 170 VTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LAN 241 (347)
T ss_dssp CGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTT
T ss_pred chh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhc
Confidence 322 5556666666666666654322 5566666666666666665433 5666666666666666664433 666
Q ss_pred CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+++|+.|++++|.+++. +.+..+++|+.|++++|.+++. +.+..+++|+.|+
T Consensus 242 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--------------------------~~~~~l~~L~~L~ 293 (347)
T 4fmz_A 242 LSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--------------------------SVLNNLSQLNSLF 293 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--------------------------GGGGGCTTCSEEE
T ss_pred CCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--------------------------hhhcCCCCCCEEE
Confidence 66777777777666542 3455666666666666665421 2355677888888
Q ss_pred CcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCC
Q 002186 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNP 472 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~ 472 (955)
+++|++++..|..+..+++|++|++++|++++..| +..+++|++|++++|+
T Consensus 294 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 294 LNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQV 344 (347)
T ss_dssp CCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC-
T ss_pred CcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhc
Confidence 88888888888888888888888888888887655 7778888888888883
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=332.85 Aligned_cols=250 Identities=14% Similarity=0.074 Sum_probs=187.5
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEc------CC
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYN------RH 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------~~ 759 (955)
..|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.. .+
T Consensus 14 grY~--i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 14 GPWE--MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ---C--CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCeE--EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 4566 888999999999999996 579999999987532 235678899999999999999999999765 66
Q ss_pred eeEEEEeecCCCChhHHhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC---ceECcc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEF 831 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~Df 831 (955)
..++|||||++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 78999999999999999976 367888899999999999999998 9999999999999997665 899999
Q ss_pred cccccccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc------------ccc
Q 002186 832 GFKYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP------------IDG 898 (955)
Q Consensus 832 Gl~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~------------~~~ 898 (955)
|+++........ ...++..|.+||...+..++.++||||+||++|||+||+.||........|. ...
T Consensus 169 G~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 169 GYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred ccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence 998765433221 1234556888999888889999999999999999999999996432111110 000
Q ss_pred cccccc-cccccCC-CCchHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 002186 899 LLGEMY-NENEVGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 943 (955)
Q Consensus 899 ~~~~~~-~~~~~~~-~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev 943 (955)
...... .....+. ..........+.+++..||+.||++|||++|+
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000000 0000010 11123345678899999999999999999774
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-32 Score=301.23 Aligned_cols=302 Identities=20% Similarity=0.320 Sum_probs=195.7
Q ss_pred cEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEe
Q 002186 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (955)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ld 155 (955)
.++.++++++.+.. ++ .+.. +++|++|++++|.+++..+ +..+++|++|+|++|.++. +| .|..+++|++|+
T Consensus 45 ~L~~L~l~~~~i~~-~~-~~~~--~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~ 116 (347)
T 4fmz_A 45 SITKLVVAGEKVAS-IQ-GIEY--LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELY 116 (347)
T ss_dssp TCSEEECCSSCCCC-CT-TGGG--CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEE
T ss_pred cccEEEEeCCcccc-ch-hhhh--cCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEE
Confidence 46778888877754 33 2444 8899999999999986544 9999999999999999986 34 699999999999
Q ss_pred CCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccC
Q 002186 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (955)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g 235 (955)
+++|.+++. |. +..+++|++|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+
T Consensus 117 l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCc-hh-hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 999999864 44 89999999999999977655544 9999999999999999876443 6666777777776666553
Q ss_pred CCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCC
Q 002186 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFAD 315 (955)
Q Consensus 236 ~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 315 (955)
..+ +..+++|++|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|++|++++|.+++.
T Consensus 192 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~------- 258 (347)
T 4fmz_A 192 ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI------- 258 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-------
T ss_pred ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-------
Confidence 322 4555555666665555554322 4445555555555555543322 44445555555555544432
Q ss_pred CCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceee
Q 002186 316 LKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLI 395 (955)
Q Consensus 316 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~ 395 (955)
+.+..+++|+.|++++|.+++. +.+..+++|+.|++++|.+++..|
T Consensus 259 -------------------~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~------------- 304 (347)
T 4fmz_A 259 -------------------NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDM------------- 304 (347)
T ss_dssp -------------------GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGH-------------
T ss_pred -------------------hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcCh-------------
Confidence 2344445555555555554432 234444555555555555443222
Q ss_pred ccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCC
Q 002186 396 LFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFT 450 (955)
Q Consensus 396 l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 450 (955)
..+..+++|++|++++|++++..| +..+++|++|++++|.++
T Consensus 305 -----------~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 305 -----------EVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp -----------HHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred -----------hHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 233445566666666666665544 556666666666666654
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.3e-33 Score=337.60 Aligned_cols=236 Identities=15% Similarity=0.168 Sum_probs=185.1
Q ss_pred hhcccchhhhccCCCCCceEEEeCC--CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCe----
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP--TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ---- 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~--~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---- 760 (955)
..|. ..+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++++++|||||+++++|.+.+.
T Consensus 80 ~~y~--i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 80 GQYE--VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CceE--EEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 4466 7889999999999999864 68999999986432 235567899999999999999999999987655
Q ss_pred -eEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 761 -AYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 761 -~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
.|+||||+++|+|.+++....+|.++..|+.|+++||+|||+. +|+||||||+||+++.+ .+||+|||+++....
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred eeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 7999999999999999988899999999999999999999999 99999999999999986 899999999876543
Q ss_pred cCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 840 ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 840 ~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....++..|.+||+.... ++.++|||||||++|||++|..|+..... ... ..........
T Consensus 234 ~--~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~----------~~~------~~~~~~~~~~ 294 (681)
T 2pzi_A 234 F--GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV----------DGL------PEDDPVLKTY 294 (681)
T ss_dssp C--SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC----------SSC------CTTCHHHHHC
T ss_pred C--CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc----------ccc------cccccccccC
Confidence 2 223355668889987664 48899999999999999999877652110 000 0011112233
Q ss_pred HHHHHHHHHccCCCCCCCCC-HHHHHHHhhc
Q 002186 920 KLVLDVALLCTRSTPSDRPS-MEEALKLLSG 949 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt-~~ev~~~L~~ 949 (955)
..+.+++.+||+.||++||+ ++++...|..
T Consensus 295 ~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 295 DSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 56788999999999999995 5555555543
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-31 Score=294.35 Aligned_cols=290 Identities=21% Similarity=0.271 Sum_probs=231.7
Q ss_pred CccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccC
Q 002186 62 ACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF 141 (955)
Q Consensus 62 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 141 (955)
.|.|..+.|+.. ++. .+|..+ .++|++|+|++|.+++..|..|.++++|++|+|++|.+++..
T Consensus 32 ~c~l~~l~~~~~------------~l~-~ip~~~----~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 94 (332)
T 2ft3_A 32 HCHLRVVQCSDL------------GLK-AVPKEI----SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIH 94 (332)
T ss_dssp EEETTEEECCSS------------CCS-SCCSCC----CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred cccCCEEECCCC------------Ccc-ccCCCC----CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccC
Confidence 467777777642 222 334333 357899999999999888889999999999999999999888
Q ss_pred CccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCC--CCCchhccC
Q 002186 142 PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN--DQIPAELGM 219 (955)
Q Consensus 142 p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~ 219 (955)
|..|+.+++|++|+|++|.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.++ +..|..+..
T Consensus 95 ~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 171 (332)
T 2ft3_A 95 EKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG 171 (332)
T ss_dssp GGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCS
T ss_pred HhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccC
Confidence 999999999999999999998 5666655 79999999999998777777999999999999999985 367777887
Q ss_pred CCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEE
Q 002186 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299 (955)
Q Consensus 220 l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 299 (955)
+ +|+.|++++|.+.+ +|..+. ++|++|++++|.+++..+..+..+++|++|++++|++++..+..|..+++|++|+
T Consensus 172 l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 247 (332)
T 2ft3_A 172 L-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELH 247 (332)
T ss_dssp C-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEE
T ss_pred C-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEE
Confidence 7 88899999888875 555443 6888888888888887778888888888888888888887777788888888888
Q ss_pred ccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC------CCCccEEEccCCcCc--ccCCcccCCCCCCCeee
Q 002186 300 LSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ------LPSLEILFIWNNYFS--GSLPENLGRNSKLRWVD 371 (955)
Q Consensus 300 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~------l~~L~~L~L~~N~l~--~~~p~~~~~~~~L~~L~ 371 (955)
|++|+++ .+|..+..+++|+.|++++|++++..+..+.. .++|+.|++++|.+. +..|..+..+++|+.++
T Consensus 248 L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~ 326 (332)
T 2ft3_A 248 LDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQ 326 (332)
T ss_dssp CCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEE
T ss_pred CCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhh
Confidence 8888888 57777888888888888888888766666654 356788888888876 55666777788888888
Q ss_pred cCCCc
Q 002186 372 VSTNN 376 (955)
Q Consensus 372 ls~N~ 376 (955)
+++|+
T Consensus 327 l~~n~ 331 (332)
T 2ft3_A 327 FGNYK 331 (332)
T ss_dssp C----
T ss_pred ccccc
Confidence 87764
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=8.7e-31 Score=290.06 Aligned_cols=292 Identities=20% Similarity=0.239 Sum_probs=219.2
Q ss_pred CCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCcc
Q 002186 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (955)
Q Consensus 61 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (955)
+.|.|..+.|+... +. .+|..+ .+.+++|+|++|.+++..+..|.++++|++|+|++|.+++.
T Consensus 29 c~c~l~~l~~~~~~------------l~-~lp~~~----~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 91 (330)
T 1xku_A 29 CQCHLRVVQCSDLG------------LE-KVPKDL----PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI 91 (330)
T ss_dssp CEEETTEEECTTSC------------CC-SCCCSC----CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCB
T ss_pred CcCCCeEEEecCCC------------cc-ccCccC----CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCee
Confidence 45778777776521 11 233322 24688999999999988887899999999999999999988
Q ss_pred CCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCC--CCchhcc
Q 002186 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND--QIPAELG 218 (955)
Q Consensus 141 ~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~ 218 (955)
.|..|+.+++|++|+|++|.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.++. ..+..+.
T Consensus 92 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 168 (330)
T 1xku_A 92 SPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 168 (330)
T ss_dssp CTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGG
T ss_pred CHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhcc
Confidence 8889999999999999999988 4666554 789999999999988777788899999999999998854 6677788
Q ss_pred CCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEE
Q 002186 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSL 298 (955)
Q Consensus 219 ~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 298 (955)
.+++|++|++++|.+.. +|..+. ++|++|++++|.+++..|..+..+++|++|++++|.+++..+..+..+++|++|
T Consensus 169 ~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 245 (330)
T 1xku_A 169 GMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLREL 245 (330)
T ss_dssp GCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEE
T ss_pred CCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEE
Confidence 88888888888887764 454443 678888888888877777778888888888888888877777777777888888
Q ss_pred EccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC------CCCccEEEccCCcCcc--cCCcccCCCCCCCee
Q 002186 299 DLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ------LPSLEILFIWNNYFSG--SLPENLGRNSKLRWV 370 (955)
Q Consensus 299 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~------l~~L~~L~L~~N~l~~--~~p~~~~~~~~L~~L 370 (955)
+|++|+++ .+|.++..+++|++|++++|++++..+..+.. .+.++.|++++|.+.. ..|..+..+.+++.+
T Consensus 246 ~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l 324 (330)
T 1xku_A 246 HLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAV 324 (330)
T ss_dssp ECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGE
T ss_pred ECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEE
Confidence 88888877 56777777888888888888877666555543 2566777777776642 344556666666666
Q ss_pred ecCCCc
Q 002186 371 DVSTNN 376 (955)
Q Consensus 371 ~ls~N~ 376 (955)
++++|+
T Consensus 325 ~L~~N~ 330 (330)
T 1xku_A 325 QLGNYK 330 (330)
T ss_dssp EC----
T ss_pred EecccC
Confidence 666653
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-32 Score=312.50 Aligned_cols=231 Identities=19% Similarity=0.128 Sum_probs=170.2
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc----chHHHHHHHHHHHhccCC-CCce---------e---------
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRH-KNLI---------R--------- 750 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H-~niv---------~--------- 750 (955)
..+.||+|+||+||+|+ ..+|+.||||+++... ...+.+.+|+.+++.++| +|.. .
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 66789999999999999 6689999999987322 225678899999999987 3211 1
Q ss_pred ---EeEEEEc-----CCeeEEEEeecCCCChhHHhh---------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 002186 751 ---LLGFCYN-----RHQAYLLYDYLPNGNLSEKIR---------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 813 (955)
Q Consensus 751 ---l~g~~~~-----~~~~~lv~ey~~~gsL~~~l~---------~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdl 813 (955)
+..++.. ....+++|+++ +|+|.+++. ..+++..+..++.|+++||+|||+. +|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence 1111111 12457777766 689999984 2346778889999999999999999 9999999
Q ss_pred CCCCeeeCCCCCceECcccccccccccCCCCcccccccCchhhh----------hccCCcccccchhHHHHHHHHHhCCC
Q 002186 814 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFY----------NAMKEEMYMDVYGFGEIILEILTNGR 883 (955)
Q Consensus 814 k~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~----------~~~~~~~~~DV~S~Gvvl~Elltg~~ 883 (955)
||+|||++.++.+||+|||+++....... ...+ ..|.+||+. ....++.++|||||||++|||+||+.
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~-~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~ 315 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAV-SPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEEC-CCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccc-cCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence 99999999999999999999876543322 2234 668899988 44567889999999999999999999
Q ss_pred CCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 884 LTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 884 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
||....... .....+... . .....+.+++.+||+.||++|||+.|+++
T Consensus 316 Pf~~~~~~~------~~~~~~~~~-~-------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 316 PNTDDAALG------GSEWIFRSC-K-------NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCCTTGGGS------CSGGGGSSC-C-------CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCcchhh------hHHHHHhhc-c-------cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 987433211 111111111 0 11245778899999999999999887754
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=286.44 Aligned_cols=291 Identities=21% Similarity=0.270 Sum_probs=233.3
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|+.+++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4678999999987 5666554 689999999999998888899999999999999999998889999999999999999
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEeccccccc--CCCCccccCCCCCcEEeccCCCCCC
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ--GNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~--g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
+|.++ .+|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.+. +..+..+.++++|++|++++|.++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 99998 5676654 79999999999999888888999999999999999885 3677788889999999999998874
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
+|..+. ++|++|++++|++++..|..|..+++|++|++++|++++..+..|..+++|+.|++++|+++ .+|..+..
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred -CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 555443 78888888888888887888888888888888888888777778888888888888888887 67777888
Q ss_pred CCCccEEEccCCcCcccCCcccCCC------CCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCC
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRN------SKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCS 413 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~------~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~ 413 (955)
+++|++|++++|++++..+..|... ..++.+++++|.+.. ....|..|..+.
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~----------------------~~i~~~~f~~~~ 319 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY----------------------WEIQPSTFRCVY 319 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG----------------------GGSCGGGGTTCC
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccc----------------------cccCcccccccc
Confidence 8888888888888876655555322 445555555555431 013455677788
Q ss_pred CCcEEECcCCc
Q 002186 414 SLVRLRLEDNS 424 (955)
Q Consensus 414 ~L~~L~Ls~N~ 424 (955)
+++.++|++|+
T Consensus 320 ~l~~l~L~~N~ 330 (330)
T 1xku_A 320 VRAAVQLGNYK 330 (330)
T ss_dssp CGGGEEC----
T ss_pred ceeEEEecccC
Confidence 88888888875
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=287.22 Aligned_cols=293 Identities=24% Similarity=0.282 Sum_probs=202.7
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEcc
Q 002186 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205 (955)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 205 (955)
+|+++++++|.+. .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 6899999999887 5666553 688999999999887777888999999999999999988888889999999999999
Q ss_pred CCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCC--CCCCccccCCCCCCEEEeccccccc
Q 002186 206 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS--GSIPKELSNLTKLESLFLFRNQLAG 283 (955)
Q Consensus 206 ~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~--~~~p~~l~~l~~L~~L~L~~N~l~~ 283 (955)
+|.++ .+|..+. ++|++|++++|.+.+..+..+.++++|++|++++|.++ +..|..+..+ +|++|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 99887 4565554 67777777777777665666777777777777777774 3556666666 77777777777765
Q ss_pred cCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCC
Q 002186 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 363 (955)
Q Consensus 284 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 363 (955)
+|..+. ++|++|++++|++++..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|+++ .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 343332 56777777777777666667777777777777777777666666667777777777777766 56666666
Q ss_pred CCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccc--cccchhccCCCCCCE
Q 002186 364 NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFS--GEIPLKFSQLPDINY 441 (955)
Q Consensus 364 ~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~ 441 (955)
+++|+.|++++|.+++..+..++... + .....+|+.|++++|.+. +..|..|..+++|+.
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~----------------~--~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~ 324 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVG----------------F--GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLA 324 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSS----------------C--CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTT
T ss_pred CccCCEEECCCCCCCccChhHccccc----------------c--ccccccccceEeecCcccccccCcccccccchhhh
Confidence 66677777766666633222221100 0 011345666666666665 445555666666666
Q ss_pred EECCCC
Q 002186 442 IDLSRN 447 (955)
Q Consensus 442 L~Ls~N 447 (955)
+++++|
T Consensus 325 l~l~~n 330 (332)
T 2ft3_A 325 IQFGNY 330 (332)
T ss_dssp EEC---
T ss_pred hhcccc
Confidence 666655
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-34 Score=335.37 Aligned_cols=351 Identities=17% Similarity=0.182 Sum_probs=174.4
Q ss_pred CCCcEEECCCCcCcccCCcc-ccCCCCCCEEEccCCcCCc----cCCccccCCCCCcEEeCCCCCCCCCCchhh-cCCC-
Q 002186 101 NELVDLNLSHNSFSGQFPVE-IFNLTSLISLDISRNNFSG----HFPGGIQSLRNLLVLDAFSNSFSGSVPAEI-SQLE- 173 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~-~~L~- 173 (955)
++|++|||++|+++...... +..+++|++|+|++|.++. .++..+..+++|++|||++|.++...+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 34666777777765443332 5566777777777777663 345556666777777777776654333333 2344
Q ss_pred ---cceEEEecCCCCcc----cCCCCcCCCCCCcEEEccCCCCCCCCchhcc-----CCCCCcEEecccccccCC----C
Q 002186 174 ---HLKVLNLAGSYFSG----PIPSQFGSFKSLEFLHLAGNLLNDQIPAELG-----MLKTVTHMEIGYNFYQGN----I 237 (955)
Q Consensus 174 ---~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~l~~n~l~g~----~ 237 (955)
+|++|+|++|.++. .+|..|..+++|++|+|++|.+++..+..+. ..++|++|++++|.+++. +
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 57777777776663 4466666777777777777766543333322 234556666665555442 2
Q ss_pred CccccCCCCCcEEeccCCCCCCCCCcccc-----CCCCCCEEEecccccccc----CCccCcCCCccCEEEccCCCCCCC
Q 002186 238 PWQLGNMSEVQYLDIAGANLSGSIPKELS-----NLTKLESLFLFRNQLAGQ----VPWEFSRVTTLKSLDLSDNRLSGP 308 (955)
Q Consensus 238 p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 308 (955)
+..+..+++|++|++++|.+....+..+. ..++|++|++++|.+++. ++..+..+++|++|++++|+++..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 33344455555555555554432222221 134555555555555432 233344445555555555554432
Q ss_pred C-----CcccCCCCCCcEEecccccCCCC----CccccCCCCCccEEEccCCcCcccCCcccC-----CCCCCCeeecCC
Q 002186 309 I-----PESFADLKNLRLLSLMYNEMSGT----VPESLVQLPSLEILFIWNNYFSGSLPENLG-----RNSKLRWVDVST 374 (955)
Q Consensus 309 ~-----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----~~~~L~~L~ls~ 374 (955)
. +..+..+++|+.|++++|+++.. ++..+..+++|++|++++|.+++..+..+. ..++|+.|++++
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 322 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKS 322 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCC
Confidence 1 11222344555555555554432 333444445555555555554432221111 113445555554
Q ss_pred CcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccC-----CCCCCEEECCCCcC
Q 002186 375 NNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQ-----LPDINYIDLSRNGF 449 (955)
Q Consensus 375 N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l 449 (955)
|.+++.... .++..+..+++|++|++++|++++..+..+.. .++|++|++++|++
T Consensus 323 n~l~~~~~~--------------------~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 323 CSFTAACCS--------------------HFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp SCCBGGGHH--------------------HHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred CCCchHHHH--------------------HHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 444432000 02223334455555555555554443332221 34555555555555
Q ss_pred CC----CCCcchhhccCCcccccCCC
Q 002186 450 TG----GIPTDINQASKLEYFNVSNN 471 (955)
Q Consensus 450 ~~----~ip~~~~~~~~L~~L~ls~N 471 (955)
++ .+|..+..+++|++|++++|
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N 408 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNN 408 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSS
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCC
Confidence 43 44444455555555555555
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.97 E-value=8.7e-32 Score=298.93 Aligned_cols=239 Identities=11% Similarity=0.121 Sum_probs=177.3
Q ss_pred hhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---------hHHHHHHHHHHHhccC---------CCCcee
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVR---------HKNLIR 750 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---------~~~~~~~e~~~l~~l~---------H~niv~ 750 (955)
++|. ..+.||+|+||+||+|+. +|+.||||+++.... ..+.+.+|++++++++ |||||+
T Consensus 20 ~~y~--~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 20 EKLQ--RCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHH--TCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccch--heeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 3455 788999999999999997 789999999975421 2367888899888875 888888
Q ss_pred EeEEEE------------------------------cCCeeEEEEeecCCCChhHHh-hcCCCHHHHHHHHHHHHHHHHH
Q 002186 751 LLGFCY------------------------------NRHQAYLLYDYLPNGNLSEKI-RTKRDWAAKYKIVLGVARGLCF 799 (955)
Q Consensus 751 l~g~~~------------------------------~~~~~~lv~ey~~~gsL~~~l-~~~~~~~~~~~i~~~ia~gl~~ 799 (955)
+.+++. +.+..|+|||||++|++.+.+ +...++.+...|+.|++.||+|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 877643 267899999999999765555 4466899999999999999999
Q ss_pred Hh-cCCCCCcccCCCCCCCeeeCCCC--------------------CceECcccccccccccCCCCcccccccCchhhhh
Q 002186 800 LH-HDCYPAIPHGDLKASNIVFDENM--------------------EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYN 858 (955)
Q Consensus 800 lH-~~~~~~iiHrdlk~~NiLl~~~~--------------------~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~ 858 (955)
|| +. +|+||||||+|||++.++ .+||+|||+++..... ...++..|++||+..
T Consensus 177 lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 177 AEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---IVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---EEECCCCTTCSGGGC
T ss_pred HHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---cEEEeecccChhhhc
Confidence 99 88 999999999999999887 8999999999865432 223566688999887
Q ss_pred ccCCcccccchhHHHH-HHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCC
Q 002186 859 AMKEEMYMDVYGFGEI-ILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR 937 (955)
Q Consensus 859 ~~~~~~~~DV~S~Gvv-l~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~R 937 (955)
+.. +.++||||+|++ .+++++|..|+...... ............... ....+.......++.+++.+||+.|
T Consensus 251 g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~dli~~~L~~d---- 323 (336)
T 2vuw_A 251 GDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL-HYLTDKMLKQMTFKT-KCNTPAMKQIKRKIQEFHRTMLNFS---- 323 (336)
T ss_dssp CCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH-HHHHHHHHHTCCCSS-CCCSHHHHHHHHHHHHHHHHGGGSS----
T ss_pred CCC-ccceehhhhhCCCCcccccccCCCcchhhh-hHHHHhhhhhhccCc-ccchhhhhhcCHHHHHHHHHHhccC----
Confidence 665 889999998776 77888888887421000 000000000000010 1111223456678999999999976
Q ss_pred CCHHHHH
Q 002186 938 PSMEEAL 944 (955)
Q Consensus 938 Pt~~ev~ 944 (955)
|++|++
T Consensus 324 -sa~e~l 329 (336)
T 2vuw_A 324 -SATDLL 329 (336)
T ss_dssp -SHHHHH
T ss_pred -CHHHHH
Confidence 999988
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=289.12 Aligned_cols=284 Identities=20% Similarity=0.218 Sum_probs=198.2
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
..+|.|.|+ |+.... +++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++
T Consensus 27 ~~~C~~~~~-c~~~~~----------~l~-~iP~~~----~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 90 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSG----------SLN-SIPSGL----TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT 90 (353)
T ss_dssp CCEECTTSE-EECCST----------TCS-SCCTTC----CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCE
T ss_pred CCCCCCCeE-eeCCCC----------Ccc-cccccc----cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCc
Confidence 457999988 765332 222 344433 3579999999999998877799999999999999999999
Q ss_pred cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCC-CCcCCCCCCcEEEccCC-CCCCCCchhc
Q 002186 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGN-LLNDQIPAEL 217 (955)
Q Consensus 140 ~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~l 217 (955)
..|..|+.+++|++|||++|.+++..+..+.++++|++|+|++|.+++..+ ..|.++++|++|++++| .+.+..|..+
T Consensus 91 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 170 (353)
T 2z80_A 91 IEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDF 170 (353)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTT
T ss_pred cCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHc
Confidence 889999999999999999999997666669999999999999999985444 47899999999999998 4666666778
Q ss_pred cCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCc---CCCc
Q 002186 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFS---RVTT 294 (955)
Q Consensus 218 ~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~ 294 (955)
..+++|++|++++|.+.+..|..+.++++|++|++++|.+....+..+..+++|++|++++|.+++..+..+. ....
T Consensus 171 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~ 250 (353)
T 2z80_A 171 AGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSL 250 (353)
T ss_dssp TTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCC
T ss_pred cCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccch
Confidence 8888888888888888777777777778888888887777533223344567777777777777665443322 2334
Q ss_pred cCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcc-cCCCCCCCeeecC
Q 002186 295 LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN-LGRNSKLRWVDVS 373 (955)
Q Consensus 295 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~~~~L~~L~ls 373 (955)
++.++|+++.+++. .+. .+|+.+..+++|+.|++++|+++ .+|.. +..+++|++|+++
T Consensus 251 l~~l~L~~~~l~~~-------------------~l~-~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~ 309 (353)
T 2z80_A 251 IKKFTFRNVKITDE-------------------SLF-QVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLH 309 (353)
T ss_dssp CCEEEEESCBCCHH-------------------HHH-HHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred hhccccccccccCc-------------------chh-hhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEee
Confidence 44455555444431 000 23444445555555555555555 23333 3455555555555
Q ss_pred CCccccc
Q 002186 374 TNNFNGS 380 (955)
Q Consensus 374 ~N~l~g~ 380 (955)
+|.+.+.
T Consensus 310 ~N~~~~~ 316 (353)
T 2z80_A 310 TNPWDCS 316 (353)
T ss_dssp SSCBCCC
T ss_pred CCCccCc
Confidence 5555543
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-33 Score=327.76 Aligned_cols=376 Identities=16% Similarity=0.152 Sum_probs=281.8
Q ss_pred CCCCEEEccCCcCCccCCcc-ccCCCCCcEEeCCCCCCCC----CCchhhcCCCcceEEEecCCCCcccCCCCc-CCCC-
Q 002186 125 TSLISLDISRNNFSGHFPGG-IQSLRNLLVLDAFSNSFSG----SVPAEISQLEHLKVLNLAGSYFSGPIPSQF-GSFK- 197 (955)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~LdL~~N~l~~----~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~-~~l~- 197 (955)
++|++|||++|+++...... +..+++|++|+|++|.++. .++..+..+++|++|+|++|.++...+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 57899999999998654333 7889999999999999885 356778889999999999999976544333 2344
Q ss_pred ---CCcEEEccCCCCCC----CCchhccCCCCCcEEecccccccCCCCcccc-----CCCCCcEEeccCCCCCCCC----
Q 002186 198 ---SLEFLHLAGNLLND----QIPAELGMLKTVTHMEIGYNFYQGNIPWQLG-----NMSEVQYLDIAGANLSGSI---- 261 (955)
Q Consensus 198 ---~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~-----~l~~L~~L~Ls~n~l~~~~---- 261 (955)
+|++|+|++|.++. .+|..+..+++|++|++++|.+.+..+..+. ..++|++|++++|.+++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 79999999999984 5688899999999999999987654333332 3567999999999888643
Q ss_pred CccccCCCCCCEEEeccccccccCCccCc-----CCCccCEEEccCCCCCCC----CCcccCCCCCCcEEecccccCCCC
Q 002186 262 PKELSNLTKLESLFLFRNQLAGQVPWEFS-----RVTTLKSLDLSDNRLSGP----IPESFADLKNLRLLSLMYNEMSGT 332 (955)
Q Consensus 262 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 332 (955)
+..+..+++|++|++++|.+++..+..+. ..++|++|++++|.++.. ++..+..+++|+.|++++|.+++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 55667788999999999998765443332 356899999999998864 466777888999999999987653
Q ss_pred C-----ccccCCCCCccEEEccCCcCccc----CCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCC
Q 002186 333 V-----PESLVQLPSLEILFIWNNYFSGS----LPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403 (955)
Q Consensus 333 ~-----p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~ 403 (955)
. +..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+.+..+..+..
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~---------------- 306 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE---------------- 306 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH----------------
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH----------------
Confidence 2 22334578889999998888764 5666777888888888888876432211110
Q ss_pred CCCcCccCCCCCcEEECcCCccccc----cchhccCCCCCCEEECCCCcCCCCCCcchhh-----ccCCcccccCCCCCC
Q 002186 404 SLSPSLSNCSSLVRLRLEDNSFSGE----IPLKFSQLPDINYIDLSRNGFTGGIPTDINQ-----ASKLEYFNVSNNPKL 474 (955)
Q Consensus 404 ~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~-----~~~L~~L~ls~N~~l 474 (955)
......++|++|++++|.+++. ++..+..+++|++|++++|++++..+..+.. .++|++|++++| .+
T Consensus 307 ---~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n-~i 382 (461)
T 1z7x_W 307 ---TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC-DV 382 (461)
T ss_dssp ---HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS-CC
T ss_pred ---HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCC-CC
Confidence 0011246899999999999876 5677888999999999999988655555543 569999999999 66
Q ss_pred CC----CCCcccCCCCccccccCcccccCCC--------CCCCCcCCccceEeccccccc
Q 002186 475 GG----MIPAQTWSLPSLQNFSASACNITGN--------LPPFKSCKSISVIESHMNNLS 522 (955)
Q Consensus 475 ~~----~~p~~~~~l~~L~~l~ls~n~l~~~--------~p~~~~~~~l~~l~l~~N~l~ 522 (955)
.+ .+|..+..+++|+.|++++|.+++. +|. ....++.|++..+.+.
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~--~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQ--PGCLLEQLVLYDIYWS 440 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTS--TTCCCCEEECTTCCCC
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhcc--CCcchhheeecccccC
Confidence 54 6777777899999999999998753 222 1234555665555544
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-30 Score=280.08 Aligned_cols=254 Identities=20% Similarity=0.268 Sum_probs=172.0
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
.+.|.|.+|.|+... ++ .+|..+ .++|++|+|++|.++...+..|.++++|++|+|++|.++.
T Consensus 4 ~C~C~~~~l~c~~~~--l~-----------~ip~~~----~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 66 (306)
T 2z66_A 4 RCSCSGTEIRCNSKG--LT-----------SVPTGI----PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSF 66 (306)
T ss_dssp TCEEETTEEECCSSC--CS-----------SCCSCC----CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCE
T ss_pred CCeeCCCEEEcCCCC--cc-----------cCCCCC----CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCc
Confidence 345899999998632 11 123221 3578899999999986555567889999999999998873
Q ss_pred --cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCC-CCcCCCCCCcEEEccCCCCCCCCchh
Q 002186 140 --HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLNDQIPAE 216 (955)
Q Consensus 140 --~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~ 216 (955)
..|..+..+++|++|||++|.++ .+|..+..+++|++|++++|.+++..+ ..|.++++|++|++++|.+++..|..
T Consensus 67 ~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 145 (306)
T 2z66_A 67 KGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI 145 (306)
T ss_dssp EEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTT
T ss_pred ccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhh
Confidence 33667777888999999988887 467778888888888888888886554 57888888888888888887777777
Q ss_pred ccCCCCCcEEecccccccC-CCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCcc
Q 002186 217 LGMLKTVTHMEIGYNFYQG-NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295 (955)
Q Consensus 217 l~~l~~L~~L~l~~n~l~g-~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 295 (955)
+..+++|++|++++|.+.+ .+|..+.++++|++|++++|.+++..|..+..+++|++|++++|++++..+..+..+++|
T Consensus 146 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 225 (306)
T 2z66_A 146 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 225 (306)
T ss_dssp TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTC
T ss_pred cccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccC
Confidence 7777777777777776655 355555666666666666666655555555555555555555555555444445555555
Q ss_pred CEEEccCCCCCCCCCcccCCCC-CCcEEecccccCCC
Q 002186 296 KSLDLSDNRLSGPIPESFADLK-NLRLLSLMYNEMSG 331 (955)
Q Consensus 296 ~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~ 331 (955)
++|++++|++++..|..+..++ +|+.|++++|.+++
T Consensus 226 ~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 226 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 5555555555555555555542 45555555555543
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=271.14 Aligned_cols=235 Identities=19% Similarity=0.234 Sum_probs=165.8
Q ss_pred CCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEE
Q 002186 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (955)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 202 (955)
..+++++|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..|+++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 4578999999999998 77888888999999999999999 88999999999999999999998 788899999999999
Q ss_pred EccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccccc
Q 002186 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (955)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 282 (955)
+|++|.+.+.+|..+... .++..+.++++|++|++++|.++ .+|..+.++++|++|++++|+++
T Consensus 156 ~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 156 SIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred ECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 999998888888776540 11122344555555555555555 45555555566666666666655
Q ss_pred ccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccC
Q 002186 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362 (955)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 362 (955)
+ +|..+..+++|++|+|++|++.+.+|..|+.+++|+.|++++|++.+.+|..+..+++|+.|++++|++.+.+|+.++
T Consensus 220 ~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 220 A-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp C-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred c-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 4 333455566666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CCCCCCeeecCCCcc
Q 002186 363 RNSKLRWVDVSTNNF 377 (955)
Q Consensus 363 ~~~~L~~L~ls~N~l 377 (955)
.+++|+.+++..|.+
T Consensus 299 ~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 299 QLPANCIILVPPHLQ 313 (328)
T ss_dssp GSCTTCEEECCGGGS
T ss_pred hccCceEEeCCHHHH
Confidence 666666666655544
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-29 Score=279.14 Aligned_cols=274 Identities=22% Similarity=0.190 Sum_probs=189.5
Q ss_pred EECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCC
Q 002186 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185 (955)
Q Consensus 106 L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l 185 (955)
.|+++|.++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+
T Consensus 36 c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (353)
T 2z80_A 36 CKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112 (353)
T ss_dssp EECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcC
Confidence 567788887 5666555 4888888888888877666788888888888888888877777788888888888888888
Q ss_pred cccCCCCcCCCCCCcEEEccCCCCCCCCc-hhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCcc
Q 002186 186 SGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264 (955)
Q Consensus 186 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 264 (955)
++..+..|+++++|++|+|++|++++..+ ..+..+++|++|++++|. .+.+..+..
T Consensus 113 ~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~-----------------------~~~~~~~~~ 169 (353)
T 2z80_A 113 SNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD-----------------------TFTKIQRKD 169 (353)
T ss_dssp SSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS-----------------------SCCEECTTT
T ss_pred CcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCc-----------------------cccccCHHH
Confidence 76555557788888888888887764322 245555555555555542 233333444
Q ss_pred ccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCcccc---CCCC
Q 002186 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL---VQLP 341 (955)
Q Consensus 265 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l---~~l~ 341 (955)
+.++++|++|++++|++++..|..+..+++|++|++++|+++...+..+..+++|+.|++++|++++..+..+ ...+
T Consensus 170 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~ 249 (353)
T 2z80_A 170 FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNS 249 (353)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCC
T ss_pred ccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccc
Confidence 5555555555555555555555556666666666666666543322233445666666666666665443332 2356
Q ss_pred CccEEEccCCcCcc----cCCcccCCCCCCCeeecCCCcccccCCCCC-CCCCccceeeccCCCCCCCCC
Q 002186 342 SLEILFIWNNYFSG----SLPENLGRNSKLRWVDVSTNNFNGSIPPDI-CSGGVLFKLILFSNNFTGSLS 406 (955)
Q Consensus 342 ~L~~L~L~~N~l~~----~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~-~~~~~l~~l~l~~n~l~~~~p 406 (955)
.++.++++++.+++ .+|..+..+++|+.|++++|+++ .+|..+ ..+.+|+.+++++|.+.+..|
T Consensus 250 ~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 250 LIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 67888888888876 47788899999999999999998 788775 678999999999999987654
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-29 Score=271.45 Aligned_cols=248 Identities=21% Similarity=0.263 Sum_probs=169.4
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCC--CCchhhcCCCcceEEEec
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSG--SVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~--~~p~~~~~L~~L~~L~Ls 181 (955)
+.++.+++.++ .+|..+. ++|++|+|++|+++...+..|..+++|++|+|++|.++. ..|..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 35777888887 5565554 689999999999986655668999999999999999883 346778889999999999
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc-hhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC-
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG- 259 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~- 259 (955)
+|.++ .+|..|..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.+..|..+.++++|++|++++|.+++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 99988 467778889999999999998876544 456666666666666666666556556666666666666666654
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
.+|..+..+++|++|++++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|++++|++++..|..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 34555555666666666666665555555555555666666666555554445555555555555555555555555555
Q ss_pred CC-CccEEEccCCcCcc
Q 002186 340 LP-SLEILFIWNNYFSG 355 (955)
Q Consensus 340 l~-~L~~L~L~~N~l~~ 355 (955)
++ +|++|++++|.+++
T Consensus 246 ~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CCTTCCEEECTTCCEEC
T ss_pred hhccCCEEEccCCCeec
Confidence 53 55555555555543
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-31 Score=317.77 Aligned_cols=401 Identities=15% Similarity=0.097 Sum_probs=198.7
Q ss_pred CCCCCCEEEccCCcCCccCCccccCC--CCCcEEeCCCCC-CCC-CCchhhcCCCcceEEEecCCCCccc----CCCCcC
Q 002186 123 NLTSLISLDISRNNFSGHFPGGIQSL--RNLLVLDAFSNS-FSG-SVPAEISQLEHLKVLNLAGSYFSGP----IPSQFG 194 (955)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~LdL~~N~-l~~-~~p~~~~~L~~L~~L~Ls~n~l~~~----~p~~~~ 194 (955)
.+++|++|+|++|.+++..+..+..+ .+|++|+|++|. ++. .++....++++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 44555555555555544433333332 225555555443 110 0111122445555555555544332 122233
Q ss_pred CCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEE
Q 002186 195 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESL 274 (955)
Q Consensus 195 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L 274 (955)
++++|++|++++|.+++.-+ +.++..+.++++|++|++++|.+.+ +|..+.++++|++|
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~--------------------~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L 248 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISP--------------------KDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEF 248 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCH--------------------HHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEE
T ss_pred cCCCccEEEeeccCCCccCH--------------------HHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhh
Confidence 44445555555544431111 1222233444555555555555543 44445555555555
Q ss_pred Eecccccc---ccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCc-cccCCCCCccEEEccC
Q 002186 275 FLFRNQLA---GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP-ESLVQLPSLEILFIWN 350 (955)
Q Consensus 275 ~L~~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~ 350 (955)
+++.+... +..+..+..+++|+.|+++++.. +.+|..+..+++|+.|++++|.+++... ..+..+++|+.|++++
T Consensus 249 ~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~ 327 (592)
T 3ogk_B 249 CGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRN 327 (592)
T ss_dssp EECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEG
T ss_pred cccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccC
Confidence 55432211 12223455556666666665432 3456666666777777777766543322 3346667777777763
Q ss_pred CcCcccCCcccCCCCCCCeeecCC-----------CcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 351 NYFSGSLPENLGRNSKLRWVDVST-----------NNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 351 N~l~~~~p~~~~~~~~L~~L~ls~-----------N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+...+.++.....+++|+.|++++ |.+++. .++.....+++|++|+
T Consensus 328 ~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~-----------------------~~~~l~~~~~~L~~L~ 384 (592)
T 3ogk_B 328 VIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQR-----------------------GLIALAQGCQELEYMA 384 (592)
T ss_dssp GGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHH-----------------------HHHHHHHHCTTCSEEE
T ss_pred ccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHH-----------------------HHHHHHhhCccCeEEE
Confidence 322223333334556677777762 222211 0111123477888888
Q ss_pred CcCCccccccchhccC-CCCCCEEECC----CCcCCCC-----CCcchhhccCCcccccCCCCC-CCCCCCcccCCCCcc
Q 002186 420 LEDNSFSGEIPLKFSQ-LPDINYIDLS----RNGFTGG-----IPTDINQASKLEYFNVSNNPK-LGGMIPAQTWSLPSL 488 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----ip~~~~~~~~L~~L~ls~N~~-l~~~~p~~~~~l~~L 488 (955)
++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+..+++|++|++++|.. +.+..+..+.
T Consensus 385 l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~----- 459 (592)
T 3ogk_B 385 VYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIG----- 459 (592)
T ss_dssp EEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHH-----
T ss_pred eecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHH-----
Confidence 8888888777666665 7888888885 6666653 223355566777777764311 1111000000
Q ss_pred ccccCcccccCCCCCCCCcCCccceEecccccccc-ccCCCCCcccccceeeecccccccc-chhhhcCCCCCcEEECCC
Q 002186 489 QNFSASACNITGNLPPFKSCKSISVIESHMNNLSG-TIPESVSNCVELERIDLANNKLIGS-IPEVLARLPVLGVLDLSH 566 (955)
Q Consensus 489 ~~l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~ 566 (955)
..+++|+.|+++.|.+++ .++..+.++++|+.|+|++|++++. ++..+..+++|++|+|++
T Consensus 460 -----------------~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~ 522 (592)
T 3ogk_B 460 -----------------QYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQG 522 (592)
T ss_dssp -----------------HSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEES
T ss_pred -----------------HhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcC
Confidence 113345555555555543 2333345566677777777766544 334445566677777777
Q ss_pred CCCccccCCCc-CCCCCCcEEECCC
Q 002186 567 NSLSGQIPAKF-GSCSSLTVLNVSF 590 (955)
Q Consensus 567 N~l~~~~p~~~-~~l~~L~~L~ls~ 590 (955)
|+++..--..+ ..++.+....+..
T Consensus 523 n~it~~~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 523 YRASMTGQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp CBCCTTCTTGGGGCCTTEEEEEECC
T ss_pred CcCCHHHHHHHHHhCCCcEEEEecC
Confidence 76664422222 2344444444433
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-27 Score=273.16 Aligned_cols=228 Identities=22% Similarity=0.219 Sum_probs=168.8
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
++++.|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 57899999999999988999999999999999999999888889999999999999999999777777889999999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCch-hccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPA-ELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
++|.++...+..|.++++|++|+|++|...+.+|. .+..+++|++|+ +++|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~------------------------L~~n~l~~ 210 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLN------------------------LGMCNIKD 210 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEE------------------------CTTSCCSS
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEE------------------------CCCCcccc
Confidence 99999877777889999999999988544333332 344455555554 45554443
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
. | .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..
T Consensus 211 ~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 211 M-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp C-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred c-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 2 2 3555566666666666666666666666666666666666666666666666666666666666666655566666
Q ss_pred CCCccEEEccCCcCc
Q 002186 340 LPSLEILFIWNNYFS 354 (955)
Q Consensus 340 l~~L~~L~L~~N~l~ 354 (955)
+++|+.|++++|.+.
T Consensus 289 l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 289 LRYLVELHLHHNPWN 303 (452)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred ccCCCEEEccCCCcC
Confidence 677777777777654
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-27 Score=272.77 Aligned_cols=235 Identities=21% Similarity=0.199 Sum_probs=200.7
Q ss_pred CCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCC
Q 002186 117 FPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSF 196 (955)
Q Consensus 117 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l 196 (955)
+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++
T Consensus 69 iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 146 (452)
T 3zyi_A 69 VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYL 146 (452)
T ss_dssp CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSC
T ss_pred cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhccc
Confidence 454443 689999999999999889999999999999999999998888889999999999999999987777778899
Q ss_pred CCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCC-CccccCCCCCCEEE
Q 002186 197 KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI-PKELSNLTKLESLF 275 (955)
Q Consensus 197 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~ 275 (955)
++|++|+|++|.+++..+..+..+ ++|++|++++|+..+.+ +..+.++++|++|+
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l------------------------~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~ 202 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRV------------------------PSLMRLDLGELKKLEYISEGAFEGLFNLKYLN 202 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTC------------------------TTCCEEECCCCTTCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCcceeCHhHHhcC------------------------CcccEEeCCCCCCccccChhhccCCCCCCEEE
Confidence 999999999998875444445444 45555555553322233 34588899999999
Q ss_pred eccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcc
Q 002186 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (955)
Q Consensus 276 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 355 (955)
|++|++++. | .+..+++|++|+|++|++++..|..|..+++|+.|++++|++++..|..+..+++|+.|+|++|++++
T Consensus 203 L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 280 (452)
T 3zyi_A 203 LGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280 (452)
T ss_dssp CTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCc
Confidence 999999965 4 58899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCcccCCCCCCCeeecCCCcccc
Q 002186 356 SLPENLGRNSKLRWVDVSTNNFNG 379 (955)
Q Consensus 356 ~~p~~~~~~~~L~~L~ls~N~l~g 379 (955)
..+..+..+++|+.|++++|.+.-
T Consensus 281 ~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 281 LPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CCTTSSTTCTTCCEEECCSSCEEC
T ss_pred cChHHhccccCCCEEEccCCCcCC
Confidence 888889999999999999998873
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.6e-27 Score=270.15 Aligned_cols=228 Identities=25% Similarity=0.268 Sum_probs=171.4
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
..++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 57889999999999888889999999999999999999888888999999999999999998776778889999999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc-hhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
++|.++...+..|.++++|++|+|++|...+.++ ..+..+++ |++|++++|+++.
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~------------------------L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSN------------------------LRYLNLAMCNLRE 199 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSS------------------------CCEEECTTSCCSS
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccc------------------------cCeecCCCCcCcc
Confidence 9999987777788889999999998854433333 24444444 4555555555442
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
+| .+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..
T Consensus 200 -~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 200 -IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp -CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred -cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 23 2556666666777767666666666667777777777777777666666777777777777777777666666677
Q ss_pred CCCccEEEccCCcCc
Q 002186 340 LPSLEILFIWNNYFS 354 (955)
Q Consensus 340 l~~L~~L~L~~N~l~ 354 (955)
+++|+.|++++|.+.
T Consensus 278 l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 278 LHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred ccCCCEEEcCCCCcc
Confidence 777777777777664
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=259.54 Aligned_cols=208 Identities=23% Similarity=0.240 Sum_probs=137.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCC-CCCCCchhhcCCCcceEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~-l~~~~p~~~~~L~~L~~L 178 (955)
.++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|++++|. ++...|..+.++++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 3467778888887777766777777777777777777777777777777777777777776 665556667777777777
Q ss_pred EecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCC
Q 002186 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (955)
Q Consensus 179 ~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~ 258 (955)
+|++|.+++..|..|.++++|++|++++|.+++..+..++ ++++|++|++++|.++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~------------------------~l~~L~~L~l~~n~l~ 166 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFR------------------------DLGNLTHLFLHGNRIS 166 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT------------------------TCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhc------------------------cCCCccEEECCCCccc
Confidence 7777777766666677777777777777766654433344 4444555555555555
Q ss_pred CCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCC
Q 002186 259 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 331 (955)
Q Consensus 259 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 331 (955)
+..+..+..+++|++|++++|.+++..|..|..+++|+.|++++|++++..+..+..+++|+.|++++|.+..
T Consensus 167 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 167 SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred ccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 4444445556666666666666666656666666666666666666666555556666666666666666554
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.95 E-value=4e-29 Score=274.10 Aligned_cols=243 Identities=19% Similarity=0.237 Sum_probs=125.4
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcC-CccCCcccc-------CCCCCcEEeCCCCCCCCCCchhh--cCC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNF-SGHFPGGIQ-------SLRNLLVLDAFSNSFSGSVPAEI--SQL 172 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~LdL~~N~l~~~~p~~~--~~L 172 (955)
|+.|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. .+++|++|+|++|.+++.+|..+ ..+
T Consensus 45 L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l 120 (312)
T 1wwl_A 45 LEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATG 120 (312)
T ss_dssp CTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCS
T ss_pred ceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcC
Confidence 44444444444 344433322 44444444444 223333333 34444444444444444444443 444
Q ss_pred CcceEEEecCCCCcccCCCCcCCC-----CCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCC--CCccc--cC
Q 002186 173 EHLKVLNLAGSYFSGPIPSQFGSF-----KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN--IPWQL--GN 243 (955)
Q Consensus 173 ~~L~~L~Ls~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~--~p~~~--~~ 243 (955)
++|++|+|++|.+++. |..++.+ ++|++|+|++|++++..|..++.+++|++|++++|.+.+. +|..+ ++
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 199 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK 199 (312)
T ss_dssp CCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS
T ss_pred CCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc
Confidence 4444444444444443 4444433 4444444444444444444444444555555544444433 12222 45
Q ss_pred CCCCcEEeccCCCCCC--CCC-ccccCCCCCCEEEeccccccccCC-ccCcCCCccCEEEccCCCCCCCCCcccCCCCCC
Q 002186 244 MSEVQYLDIAGANLSG--SIP-KELSNLTKLESLFLFRNQLAGQVP-WEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319 (955)
Q Consensus 244 l~~L~~L~Ls~n~l~~--~~p-~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 319 (955)
+++|++|++++|.+++ .++ ..+.++++|++|++++|++++..| ..+..+++|++|+|++|+++ .+|..+. ++|
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L 276 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKL 276 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEE
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCc
Confidence 5566666666666552 111 223455666666666666666553 33455666667777777666 4555554 667
Q ss_pred cEEecccccCCCCCccccCCCCCccEEEccCCcCcc
Q 002186 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (955)
Q Consensus 320 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 355 (955)
+.|++++|++++. |. +..+++|++|++++|.+++
T Consensus 277 ~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 277 SVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred eEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 7777777777654 44 6667777777777776654
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.2e-27 Score=269.27 Aligned_cols=236 Identities=21% Similarity=0.218 Sum_probs=202.0
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCC
Q 002186 116 QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGS 195 (955)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~ 195 (955)
.+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.++...+..|..
T Consensus 57 ~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 134 (440)
T 3zyj_A 57 EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVY 134 (440)
T ss_dssp SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCS
T ss_pred cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhc
Confidence 4565554 68999999999999988899999999999999999999888888999999999999999998777778899
Q ss_pred CCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCC-CccccCCCCCCEE
Q 002186 196 FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI-PKELSNLTKLESL 274 (955)
Q Consensus 196 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L 274 (955)
+++|++|+|++|.+++..+..+.. +++|++|++++|+..+.+ +..|.++++|++|
T Consensus 135 l~~L~~L~L~~N~i~~~~~~~~~~------------------------l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 135 LSKLKELWLRNNPIESIPSYAFNR------------------------IPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTT------------------------CTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred cccCceeeCCCCcccccCHHHhhh------------------------CcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 999999999999887544444444 455555555553332233 3468889999999
Q ss_pred EeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCc
Q 002186 275 FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS 354 (955)
Q Consensus 275 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 354 (955)
++++|+++.. | .+..+++|++|+|++|++++..|..|..+++|+.|++++|++++..+..|..+++|+.|+|++|+++
T Consensus 191 ~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 191 NLAMCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp ECTTSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred cCCCCcCccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 9999999854 4 5889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCCCCCeeecCCCcccc
Q 002186 355 GSLPENLGRNSKLRWVDVSTNNFNG 379 (955)
Q Consensus 355 ~~~p~~~~~~~~L~~L~ls~N~l~g 379 (955)
+..+..+..+++|+.|++++|.+.-
T Consensus 269 ~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 269 LLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred ccChhHhccccCCCEEEcCCCCccC
Confidence 8888889999999999999999863
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.4e-29 Score=272.44 Aligned_cols=250 Identities=19% Similarity=0.161 Sum_probs=196.7
Q ss_pred cccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCC-CCCCchhhc-------CCCcceEEEecCCCCcccCCC
Q 002186 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF-SGSVPAEIS-------QLEHLKVLNLAGSYFSGPIPS 191 (955)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l-~~~~p~~~~-------~L~~L~~L~Ls~n~l~~~~p~ 191 (955)
.++..++|++|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 356778999999999999 778776655 99999999999 456787776 899999999999999999998
Q ss_pred Cc--CCCCCCcEEEccCCCCCCCCchhccCC-----CCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCC--CC
Q 002186 192 QF--GSFKSLEFLHLAGNLLNDQIPAELGML-----KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS--IP 262 (955)
Q Consensus 192 ~~--~~l~~L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~--~p 262 (955)
.+ +.+++|++|+|++|++++. |..++.+ ++|++|++++|.+.+..|..++++++|++|++++|.+.+. .|
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 86 8999999999999999987 8887776 8888888888888877778888888888888888887764 23
Q ss_pred ccc--cCCCCCCEEEecccccccc---CCccCcCCCccCEEEccCCCCCCCCC-cccCCCCCCcEEecccccCCCCCccc
Q 002186 263 KEL--SNLTKLESLFLFRNQLAGQ---VPWEFSRVTTLKSLDLSDNRLSGPIP-ESFADLKNLRLLSLMYNEMSGTVPES 336 (955)
Q Consensus 263 ~~l--~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~ 336 (955)
..+ ..+++|++|++++|++++. ....+..+++|++|+|++|++++.+| ..+..+++|+.|++++|+++ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 344 7778888888888887731 12334566788888888888887664 45566778888888888877 56666
Q ss_pred cCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccc
Q 002186 337 LVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379 (955)
Q Consensus 337 l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g 379 (955)
+. ++|++|++++|++++. |. +..+++|++|++++|.+++
T Consensus 272 ~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 272 LP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 65 6778888888877765 54 7777777777777777664
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-30 Score=313.96 Aligned_cols=278 Identities=13% Similarity=0.067 Sum_probs=201.8
Q ss_pred CCCCcEEECCCCcCcccCCccccCC--CCCCEEEccCCc-CCc-cCCccccCCCCCcEEeCCCCCCCCC----CchhhcC
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNL--TSLISLDISRNN-FSG-HFPGGIQSLRNLLVLDAFSNSFSGS----VPAEISQ 171 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~Ls~N~-l~~-~~p~~~~~l~~L~~LdL~~N~l~~~----~p~~~~~ 171 (955)
++.|++|+|++|.+++..+..+..+ .+|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+.+
T Consensus 111 ~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~ 190 (592)
T 3ogk_B 111 LRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQH 190 (592)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHH
T ss_pred CCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhc
Confidence 7899999999999988777777664 459999999987 221 1223335789999999999998766 4445678
Q ss_pred CCcceEEEecCCCCc----ccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEeccccccc---CCCCccccCC
Q 002186 172 LEHLKVLNLAGSYFS----GPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ---GNIPWQLGNM 244 (955)
Q Consensus 172 L~~L~~L~Ls~n~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~---g~~p~~~~~l 244 (955)
+++|++|+|++|.++ +.++..+.++++|++|+|++|.+.+ +|..+..+++|++|+++..... +..+..+..+
T Consensus 191 ~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~ 269 (592)
T 3ogk_B 191 NTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFP 269 (592)
T ss_dssp CCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCC
T ss_pred CCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhcc
Confidence 999999999999997 3455567789999999999999876 7888999999999999863322 3344567778
Q ss_pred CCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCC-ccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEe
Q 002186 245 SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP-WEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323 (955)
Q Consensus 245 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 323 (955)
++|+.|+++++. .+.+|..+..+++|++|++++|.+++... ..+..+++|++|+++++-..+.++..+..+++|+.|+
T Consensus 270 ~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~ 348 (592)
T 3ogk_B 270 RKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLR 348 (592)
T ss_dssp TTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEE
T ss_pred ccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEE
Confidence 888888888753 34577777788888888888888765433 2356788888888883322222333445678888888
Q ss_pred ccc-----------ccCCCC-CccccCCCCCccEEEccCCcCcccCCcccCC-CCCCCeeecC----CCcccc
Q 002186 324 LMY-----------NEMSGT-VPESLVQLPSLEILFIWNNYFSGSLPENLGR-NSKLRWVDVS----TNNFNG 379 (955)
Q Consensus 324 Ls~-----------N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-~~~L~~L~ls----~N~l~g 379 (955)
+++ |.+++. ++.....+++|++|+++.|.+++..+..++. +++|+.|+++ .|.+++
T Consensus 349 L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 349 IERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp EECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred eecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 883 455432 2222345778888888888887766655554 7778888885 455553
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-27 Score=253.27 Aligned_cols=226 Identities=25% Similarity=0.311 Sum_probs=173.3
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n 183 (955)
+.++.+++.++ .+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..+.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 57788888877 445443 467888888888887776677777777777777777777666777777777777777777
Q ss_pred C-CcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCC
Q 002186 184 Y-FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262 (955)
Q Consensus 184 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p 262 (955)
. +....|..|.++++|++|++++|.+++.. |..+.++++|++|++++|.+++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------------------------~~~~~~l~~L~~L~l~~n~l~~~~~ 146 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELG------------------------PGLFRGLAALQYLYLQDNALQALPD 146 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCC------------------------TTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEEC------------------------HhHhhCCcCCCEEECCCCcccccCH
Confidence 6 55555666777777777777777665443 3445566677777777777776666
Q ss_pred ccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCC
Q 002186 263 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342 (955)
Q Consensus 263 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 342 (955)
..+..+++|++|++++|++++..+..|..+++|++|++++|++++..|..|..+++|+.|++++|++++..+..+..+++
T Consensus 147 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred hHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 67888899999999999998877777888899999999999998888888888888999999888888777777888888
Q ss_pred ccEEEccCCcCccc
Q 002186 343 LEILFIWNNYFSGS 356 (955)
Q Consensus 343 L~~L~L~~N~l~~~ 356 (955)
|+.|++++|.+...
T Consensus 227 L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 227 LQYLRLNDNPWVCD 240 (285)
T ss_dssp CCEEECCSSCEECS
T ss_pred cCEEeccCCCccCC
Confidence 88888888887643
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-28 Score=270.71 Aligned_cols=267 Identities=22% Similarity=0.214 Sum_probs=181.0
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
++.++++.+.+...++..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4556666666665555555566677777777777777666677777777777777777765443 67777777777777
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p 262 (955)
|.+++.. ..++|++|++++|.+++..+.. +++|++|++++|.+++..|..++.+++|++|++++|.+++..+
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 7776432 2367777777777776544432 4567777777777766666666777777777777777776666
Q ss_pred ccc-cCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCC
Q 002186 263 KEL-SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341 (955)
Q Consensus 263 ~~l-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 341 (955)
..+ ..+++|++|++++|.+++..+ ...+++|++|+|++|++++. |..|..+++|+.|++++|+++ .+|..+..++
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred HHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCC
Confidence 555 356777777777777776522 23467777777777777754 444777777777777777777 4566677777
Q ss_pred CccEEEccCCcCc-ccCCcccCCCCCCCeeecC-CCcccccCCC
Q 002186 342 SLEILFIWNNYFS-GSLPENLGRNSKLRWVDVS-TNNFNGSIPP 383 (955)
Q Consensus 342 ~L~~L~L~~N~l~-~~~p~~~~~~~~L~~L~ls-~N~l~g~ip~ 383 (955)
+|+.|++++|.+. +.+|..+..+++|+.++++ .+.+.|..|.
T Consensus 238 ~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred CCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 7777777777777 6666777777777777776 3345554443
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=272.46 Aligned_cols=284 Identities=24% Similarity=0.304 Sum_probs=129.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccceeec------CCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcc
Q 002186 42 FNSLHDWFVPPGVNPAGKIYACSWSGVKCN------KNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSG 115 (955)
Q Consensus 42 ~~~l~~w~~~~~~~~~~~~~~c~w~gv~C~------~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~ 115 (955)
...+++|... .+||.|.|..|. .....++.++++++++. .+|..+ .++|+.|+|++|.|+
T Consensus 9 ~~~w~~W~~~--------~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l----~~~L~~L~L~~N~l~- 74 (622)
T 3g06_A 9 DAVWSAWRRA--------APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCL----PAHITTLVIPDNNLT- 74 (622)
T ss_dssp -CHHHHHHHT--------CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCC----CTTCSEEEECSCCCS-
T ss_pred HHHHHHHHhc--------CCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhh----CCCCcEEEecCCCCC-
Confidence 3456678543 568999775321 11112444555555554 444332 134555555555555
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCC
Q 002186 116 QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGS 195 (955)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~ 195 (955)
.+|. .+++|++|+|++|++++ +|. .+++|++|+|++|.+++ +|. .+++|++|+|++|.+++ +|..
T Consensus 75 ~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~--- 139 (622)
T 3g06_A 75 SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL--- 139 (622)
T ss_dssp CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---
T ss_pred CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---
Confidence 2333 34555555555555553 333 44555555555555553 232 34555555555555553 3332
Q ss_pred CCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEE
Q 002186 196 FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLF 275 (955)
Q Consensus 196 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 275 (955)
+++|++|+|++|.+++ +|. .+.+|+.|++++|.+++ +| ..+++|+.|++++|.+++ +|.. +++|+.|+
T Consensus 140 l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~ 207 (622)
T 3g06_A 140 PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLW 207 (622)
T ss_dssp CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEE
Confidence 2455555555555543 222 22344455555554443 33 233444455555554443 2221 23444444
Q ss_pred eccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcc
Q 002186 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (955)
Q Consensus 276 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 355 (955)
+++|.++. +|. .+++|+.|+|++|++++ +| ..+++|+.|++++|+++. +|. .+++|+.|++++|+++
T Consensus 208 L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~- 274 (622)
T 3g06_A 208 AYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT- 274 (622)
T ss_dssp CCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-
T ss_pred CcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-
Confidence 44444442 221 12344444444444443 22 223444444444444442 222 2344444444444444
Q ss_pred cCCcccCCCCCCCeeecCCCcccc
Q 002186 356 SLPENLGRNSKLRWVDVSTNNFNG 379 (955)
Q Consensus 356 ~~p~~~~~~~~L~~L~ls~N~l~g 379 (955)
.+|..+..+++|+.|++++|.+++
T Consensus 275 ~lp~~l~~l~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 275 RLPESLIHLSSETTVNLEGNPLSE 298 (622)
T ss_dssp SCCGGGGGSCTTCEEECCSCCCCH
T ss_pred cCCHHHhhccccCEEEecCCCCCC
Confidence 334444444444444444444443
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-25 Score=240.66 Aligned_cols=215 Identities=22% Similarity=0.252 Sum_probs=94.9
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
.++|.|.|+.|+.. ..+ +.++++++.++ .+|..+. ++|++|+|++|++++
T Consensus 2 ~~~C~~~~~~C~c~-~~~--------------------------~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~ 51 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNK--------------------------NSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSS 51 (270)
T ss_dssp CCCBGGGTCSBEEE-TTT--------------------------TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSC
T ss_pred CccCCCCCCCCEeC-CCC--------------------------CEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCe
Confidence 36899999998752 222 33444444444 2333332 345555555555554
Q ss_pred cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccC
Q 002186 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219 (955)
Q Consensus 140 ~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 219 (955)
..+..|..+++|++|+|++|.++...+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..+..
T Consensus 52 ~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 131 (270)
T 2o6q_A 52 LPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDS 131 (270)
T ss_dssp CCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTT
T ss_pred eCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCc
Confidence 44444555555555555555554333333444555555555555555444444455555555555555554433333333
Q ss_pred CCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEE
Q 002186 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299 (955)
Q Consensus 220 l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 299 (955)
+++|++|++++|.+.+..+..+.++++|++|++++|.+++..+..+..+++|++|++++|++++..+..|..+++|+.|+
T Consensus 132 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 211 (270)
T 2o6q_A 132 LTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQ 211 (270)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEE
Confidence 33333333333332222222233333344444444444333333333333344444433333333332333333333333
Q ss_pred ccCCC
Q 002186 300 LSDNR 304 (955)
Q Consensus 300 Ls~N~ 304 (955)
|++|.
T Consensus 212 l~~N~ 216 (270)
T 2o6q_A 212 LQENP 216 (270)
T ss_dssp CCSSC
T ss_pred ecCCC
Confidence 33333
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.9e-28 Score=283.58 Aligned_cols=181 Identities=14% Similarity=0.066 Sum_probs=125.6
Q ss_pred ccCCCCCceEEEe-CCCCcEEEEEEeeccc-----------chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEE
Q 002186 699 AARPQSAAGCKAV-LPTGITVSVKKIEWGA-----------TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 699 ~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~-----------~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 765 (955)
.+.|+.|.+++++ ...|+.||||.+.... ...+++.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 3455555555544 3468899999996531 1245689999999999 6999999999999999999999
Q ss_pred eecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-
Q 002186 766 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 844 (955)
Q Consensus 766 ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~- 844 (955)
||++||+|.++|........+ +|+.||+.||+|+|+. +||||||||+|||++.++.+||+|||+|+.........
T Consensus 322 Eyv~G~~L~d~i~~~~~l~~~-~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~ 397 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEEIDRE-KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPT 397 (569)
T ss_dssp ECCCSEEHHHHHHTTCCCCHH-HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSH
T ss_pred ecCCCCcHHHHHHhCCCCCHH-HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCCcccc
Confidence 999999999999875544433 5899999999999999 99999999999999999999999999998654332221
Q ss_pred -cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCC
Q 002186 845 -PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 884 (955)
Q Consensus 845 -~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p 884 (955)
..+++.|++||...+ .+..++|+||.|++++++.++..+
T Consensus 398 t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 398 NLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp HHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 225667888898765 456779999999999888776544
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.8e-25 Score=259.17 Aligned_cols=269 Identities=23% Similarity=0.341 Sum_probs=173.5
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
..++.|++++|.++ .+|..+. ++|++|+|++|.++. +|. .+++|++|||++|.+++ +|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 35889999999998 6777665 789999999998884 554 57888888888888874 554 6678888888
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~ 260 (955)
++|.+++ +|. .+++|++|++++|++++ +|.. ++ +|++|++++|.+++
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~------------------------~L~~L~Ls~N~l~~- 155 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PP------------------------GLQELSVSDNQLAS- 155 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CT------------------------TCCEEECCSSCCSC-
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CC------------------------CCCEEECcCCcCCC-
Confidence 8888875 444 56778888888887764 3322 23 44444555554443
Q ss_pred CCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCC
Q 002186 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (955)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 340 (955)
+|. .+++|+.|++++|++++ +| ..+++|+.|++++|++++ +|.. +++|+.|++++|.++. +|.. +
T Consensus 156 l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~ 220 (622)
T 3g06_A 156 LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---P 220 (622)
T ss_dssp CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---C
T ss_pred cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---C
Confidence 222 12445555555555554 22 234556666666666654 2321 3456666666666552 3321 3
Q ss_pred CCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEEC
Q 002186 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRL 420 (955)
Q Consensus 341 ~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~L 420 (955)
++|+.|++++|.+++ +| ..+++|+.|++++|.++ .+|. .+++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---------------------------~~~~L~~L~L 268 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---------------------------LPSGLLSLSV 268 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---------------------------CCTTCCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---------------------------ccccCcEEeC
Confidence 556666666666654 33 23355666666666554 2332 3567888888
Q ss_pred cCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhcc
Q 002186 421 EDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQAS 461 (955)
Q Consensus 421 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~ 461 (955)
++|+|+ .+|..+.++++|+.|+|++|.+++.+|..+..++
T Consensus 269 s~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 269 YRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 888888 6677888888888888888888887777666554
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-27 Score=273.81 Aligned_cols=234 Identities=24% Similarity=0.235 Sum_probs=124.4
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEcc
Q 002186 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205 (955)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 205 (955)
+|++|+|++|.+++..|..|+.+++|++|||++|.+++..| +..+++|++|+|++|.+++..+ .++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 44444444444444444444444445555554444444333 4444555555555554443221 1455555555
Q ss_pred CCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCcccc-CCCCCCEEEecccccccc
Q 002186 206 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELS-NLTKLESLFLFRNQLAGQ 284 (955)
Q Consensus 206 ~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~ 284 (955)
+|.+++..+. .+++|+.|++++|.+++..|..++++++|++|++++|.+++.+|..+. .+++|++|+|++|.+++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 5555443332 234444444444444444444555555566666666666655555554 556666666666666655
Q ss_pred CCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCc-ccCCcccCC
Q 002186 285 VPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS-GSLPENLGR 363 (955)
Q Consensus 285 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~ 363 (955)
.+ +..+++|+.|+|++|++++.. ..|..+++|+.|++++|.+++ +|..+..+++|+.|++++|.+. +.+|..+..
T Consensus 185 ~~--~~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 KG--QVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp EC--CCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred cc--cccCCCCCEEECCCCCCCCCC-HhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 22 234566666666666666533 336666666666666666664 4555666666666666666665 455555555
Q ss_pred CCCCCeeecC
Q 002186 364 NSKLRWVDVS 373 (955)
Q Consensus 364 ~~~L~~L~ls 373 (955)
++.|+.++++
T Consensus 261 l~~L~~l~~~ 270 (487)
T 3oja_A 261 NQRVQTVAKQ 270 (487)
T ss_dssp CHHHHHHHHH
T ss_pred CCCCcEEecc
Confidence 5555555543
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-27 Score=260.43 Aligned_cols=268 Identities=19% Similarity=0.227 Sum_probs=158.7
Q ss_pred CcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEeccc
Q 002186 151 LLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGY 230 (955)
Q Consensus 151 L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~ 230 (955)
++.++++.+.+...++..+..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| +..+++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~-------- 81 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLST-------- 81 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTT--------
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCC--------
Confidence 3445556555543333444455566666666666665555566666666666666666654332 444444
Q ss_pred ccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCC
Q 002186 231 NFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIP 310 (955)
Q Consensus 231 n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 310 (955)
|++|++++|.+++. ...++|++|++++|++++..+.. +++|++|++++|++++..+
T Consensus 82 ----------------L~~L~Ls~n~l~~l-----~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~ 137 (317)
T 3o53_A 82 ----------------LRTLDLNNNYVQEL-----LVGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRD 137 (317)
T ss_dssp ----------------CCEEECCSSEEEEE-----EECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGG
T ss_pred ----------------CCEEECcCCccccc-----cCCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccc
Confidence 44444444444321 12245556666666555543322 3456666666666666555
Q ss_pred cccCCCCCCcEEecccccCCCCCcccc-CCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCC
Q 002186 311 ESFADLKNLRLLSLMYNEMSGTVPESL-VQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGG 389 (955)
Q Consensus 311 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~ 389 (955)
..++.+++|+.|++++|.+++..+..+ ..+++|++|++++|.+++. |. ...+++|+.|++++|.+++ +
T Consensus 138 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l-------- 206 (317)
T 3o53_A 138 LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-M-------- 206 (317)
T ss_dssp BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-E--------
T ss_pred hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-c--------
Confidence 566666666666666666665544444 2456666666666666544 21 2235556666666665542 1
Q ss_pred ccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCC-CCCCcchhhccCCccccc
Q 002186 390 VLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFT-GGIPTDINQASKLEYFNV 468 (955)
Q Consensus 390 ~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~ip~~~~~~~~L~~L~l 468 (955)
|+.+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|.+. +.+|..+..+++|+.+++
T Consensus 207 ----------------~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l 269 (317)
T 3o53_A 207 ----------------GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK 269 (317)
T ss_dssp ----------------CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHH
T ss_pred ----------------hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEEC
Confidence 223556777888888888887 46777778888888888888887 666777777778888888
Q ss_pred CCCCCCCCCCCc
Q 002186 469 SNNPKLGGMIPA 480 (955)
Q Consensus 469 s~N~~l~~~~p~ 480 (955)
++|..+.|..|.
T Consensus 270 ~~~~~l~~~~~~ 281 (317)
T 3o53_A 270 QTVKKLTGQNEE 281 (317)
T ss_dssp HHHHHHHSSSSC
T ss_pred CCchhccCCchh
Confidence 766555554443
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.8e-27 Score=270.61 Aligned_cols=236 Identities=20% Similarity=0.162 Sum_probs=212.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
.++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| |+.+++|++|||++|.+++.. ..++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEE
Confidence 3479999999999999888999999999999999999998766 999999999999999998633 338999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCcccc-CCCCCcEEeccCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG-NMSEVQYLDIAGANLS 258 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~-~l~~L~~L~Ls~n~l~ 258 (955)
|++|.+++..+. .+++|++|+|++|.+++..|..++.+++|+.|++++|.+++..|..+. ++++|++|++++|.++
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 999999987665 458899999999999999999999999999999999999998888876 8999999999999999
Q ss_pred CCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCC-CCCcccc
Q 002186 259 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS-GTVPESL 337 (955)
Q Consensus 259 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l 337 (955)
+.. .+..+++|++|+|++|.+++..| .+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|..+
T Consensus 183 ~~~--~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~ 258 (487)
T 3oja_A 183 DVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (487)
T ss_dssp EEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHH
T ss_pred ccc--ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHH
Confidence 763 34469999999999999998655 58999999999999999996 7888999999999999999998 7788889
Q ss_pred CCCCCccEEEcc
Q 002186 338 VQLPSLEILFIW 349 (955)
Q Consensus 338 ~~l~~L~~L~L~ 349 (955)
..++.|+.++++
T Consensus 259 ~~l~~L~~l~~~ 270 (487)
T 3oja_A 259 SKNQRVQTVAKQ 270 (487)
T ss_dssp TTCHHHHHHHHH
T ss_pred HhCCCCcEEecc
Confidence 999999888876
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=233.30 Aligned_cols=206 Identities=25% Similarity=0.276 Sum_probs=139.0
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
+.|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..+.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 35788888888888777777888888888888888888777777888888888888888887776677777788888888
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCC-CchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ-IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
++|.+++..+..|+++++|++|++++|.+++. +|..+. ++++|++|++++|.+++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~------------------------~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS------------------------NLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGG------------------------GCTTCCEEECCSSCCCE
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhc------------------------cCCCCCEEECCCCCCCc
Confidence 87777766666677777777777777777542 344444 44444455555555544
Q ss_pred CCCccccCCCCCC----EEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCC
Q 002186 260 SIPKELSNLTKLE----SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 331 (955)
Q Consensus 260 ~~p~~l~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 331 (955)
..+..+..+++|+ +|++++|.+++..+..+.. .+|++|++++|++++..+..|..+++|+.|++++|.+.+
T Consensus 164 ~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp ECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 4444444444444 5666666666555444433 356677777777666555556666666666666666654
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=234.66 Aligned_cols=209 Identities=23% Similarity=0.243 Sum_probs=162.9
Q ss_pred cEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEe
Q 002186 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (955)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ld 155 (955)
.+..++++++.+.+..+..+.. +++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|+
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFS--FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTT--CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CccEEECCCCcccccCHhHhcc--ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 4788999999998766656665 88999999999999988888999999999999999999999889999999999999
Q ss_pred CCCCCCCCCCchhhcCCCcceEEEecCCCCccc-CCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEeccccccc
Q 002186 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP-IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ 234 (955)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~ 234 (955)
+++|.+++..+..+.++++|++|+|++|.+++. +|..|+++++|++|+|++|++++..+..+..+++|+
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~---------- 176 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP---------- 176 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT----------
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc----------
Confidence 999999987777899999999999999999874 699999999999999999999887777666555554
Q ss_pred CCCCccccCCCCCc-EEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCC
Q 002186 235 GNIPWQLGNMSEVQ-YLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGP 308 (955)
Q Consensus 235 g~~p~~~~~l~~L~-~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 308 (955)
.+. .|++++|.+++..+..+. ..+|++|++++|++++..+..|..+++|+.|++++|.+.+.
T Consensus 177 -----------~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 177 -----------LLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp -----------TCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred -----------ccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 111 344444444433332222 23556666666666555444556666666666666666543
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-24 Score=232.08 Aligned_cols=227 Identities=26% Similarity=0.307 Sum_probs=141.2
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
++..+++..+.+.... .+..+++|++|++++|.+.. + ..++.+++|++|+|++|.+++ + ..+.++++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECC
Confidence 4455566666555432 34567777777777777663 2 246777777777777777765 2 366777777777777
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCC
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~ 261 (955)
+|.+++..|..|+++++|++|+|++|++++..|..++.++ +|++|++++|.+++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~------------------------~L~~L~L~~n~l~~~~ 149 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLT------------------------NLTYLNLAHNQLQSLP 149 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCT------------------------TCCEEECCSSCCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCC------------------------CCCEEECCCCccCccC
Confidence 7777766666677777777777777777655444444444 4444444444444444
Q ss_pred CccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCC
Q 002186 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341 (955)
Q Consensus 262 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 341 (955)
+..+..+++|++|++++|++++..+..|..+++|++|++++|++++..|..|..+++|+.|++++|.+.+. ++
T Consensus 150 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~ 222 (272)
T 3rfs_A 150 KGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CP 222 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TT
T ss_pred HHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------Cc
Confidence 44455555555555555555555555555666666666666666665555566666666666666665533 34
Q ss_pred CccEEEccCCcCcccCCcccCCCC
Q 002186 342 SLEILFIWNNYFSGSLPENLGRNS 365 (955)
Q Consensus 342 ~L~~L~L~~N~l~~~~p~~~~~~~ 365 (955)
+|+.|+++.|.++|.+|.+++.+.
T Consensus 223 ~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 223 GIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp TTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred HHHHHHHHHHhCCCcccCcccccC
Confidence 566677777777777777666544
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=225.85 Aligned_cols=207 Identities=24% Similarity=0.287 Sum_probs=151.4
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+++|+.|++++|.++. + ..+..+++|++|+|++|.+.+. ..+..+++|++|+|++|.+++..+..+.++++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 6789999999999874 3 3588999999999999999873 4799999999999999999988888899999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++..|..|+++++|++|+|++|.+++..|..++.+++|+.|++++|.+++..+..++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~----------------- 178 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFD----------------- 178 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT-----------------
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhc-----------------
Confidence 999999988888899999999999999999876665566666666655555555544444444
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
.+++|++|++++|++++..+..|..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|.+++.
T Consensus 179 -------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 179 -------KLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp -------TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred -------CCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 444555555555555544444445555555555555554432 334556666666666666666555
Q ss_pred CC
Q 002186 340 LP 341 (955)
Q Consensus 340 l~ 341 (955)
++
T Consensus 245 ~~ 246 (272)
T 3rfs_A 245 VA 246 (272)
T ss_dssp BC
T ss_pred cC
Confidence 43
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=218.00 Aligned_cols=203 Identities=22% Similarity=0.297 Sum_probs=126.2
Q ss_pred CCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEc
Q 002186 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 204 (955)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 204 (955)
.+.+++++++|.++. +|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.++...+..|.++++|++|+|
T Consensus 16 ~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 356788888888874 565554 57888888888888766667888888888888888887665666778888888888
Q ss_pred cCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccccccc
Q 002186 205 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQ 284 (955)
Q Consensus 205 ~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 284 (955)
++|.+++..+..+..+++|++|++++|.+.+..|..+.++++|++|++++|.+++ .
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~------------------------~ 148 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS------------------------L 148 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC------------------------C
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCc------------------------c
Confidence 8888776555555556666666555555554444444555555555555555544 3
Q ss_pred CCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCc
Q 002186 285 VPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS 354 (955)
Q Consensus 285 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 354 (955)
.+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|.+.
T Consensus 149 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 149 PKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 3333444455555555555555444444555555555555555555444444555555555555555543
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.4e-23 Score=217.70 Aligned_cols=143 Identities=20% Similarity=0.258 Sum_probs=76.9
Q ss_pred CCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCcc
Q 002186 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (955)
Q Consensus 61 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (955)
.||.|.|++|..... .++++++++. .+|..+ .+.++.|+|++|.+++..|..|.++++|++|+|++|.+++.
T Consensus 3 ~Cp~~~gC~C~~~~~---~l~~~~~~l~-~~p~~~----~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 74 (251)
T 3m19_A 3 TCETVTGCTCNEGKK---EVDCQGKSLD-SVPSGI----PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTL 74 (251)
T ss_dssp -CHHHHSSEEEGGGT---EEECTTCCCS-SCCSCC----CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCC
T ss_pred cCCCCCceEcCCCCe---EEecCCCCcc-ccCCCC----CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCcc
Confidence 588999999964222 2345555444 233222 13455555555555555555555555555555555555555
Q ss_pred CCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCC
Q 002186 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND 211 (955)
Q Consensus 141 ~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (955)
.|..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|++++
T Consensus 75 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 145 (251)
T 3m19_A 75 SAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS 145 (251)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCc
Confidence 55555555555555555555554444445555555555555555554444444555555555555555543
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-27 Score=285.84 Aligned_cols=433 Identities=16% Similarity=0.127 Sum_probs=215.5
Q ss_pred CCCCcEEECCCCcCcc---cCCc------------cccCCCCCCEEEccCCcCCccCCcccc-CCCCCcEEeCCCC-CCC
Q 002186 100 FNELVDLNLSHNSFSG---QFPV------------EIFNLTSLISLDISRNNFSGHFPGGIQ-SLRNLLVLDAFSN-SFS 162 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~---~~p~------------~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~LdL~~N-~l~ 162 (955)
+++|+.|+|+++.... ..|. .+..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++
T Consensus 65 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~ 144 (594)
T 2p1m_B 65 FPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFS 144 (594)
T ss_dssp CTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEE
T ss_pred CCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCC
Confidence 6788889888875321 1221 123577888888888887766665554 5778888888877 443
Q ss_pred CC-CchhhcCCCcceEEEecCCCCcccCCCCc----CCCCCCcEEEccCCC--CCCC-CchhccCCCCCcEEeccccccc
Q 002186 163 GS-VPAEISQLEHLKVLNLAGSYFSGPIPSQF----GSFKSLEFLHLAGNL--LNDQ-IPAELGMLKTVTHMEIGYNFYQ 234 (955)
Q Consensus 163 ~~-~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~----~~l~~L~~L~L~~N~--l~~~-~p~~l~~l~~L~~L~l~~n~l~ 234 (955)
.. ++..+.++++|++|+|++|.+++..+..+ ..+++|++|++++|. ++.. ++.....+++|++|++++|...
T Consensus 145 ~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~ 224 (594)
T 2p1m_B 145 TDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPL 224 (594)
T ss_dssp HHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCH
T ss_pred HHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcH
Confidence 22 33444577888888888887665443333 356678888887775 2110 1111234566666666666322
Q ss_pred CCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEE-EccCCCCCCCCCccc
Q 002186 235 GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSL-DLSDNRLSGPIPESF 313 (955)
Q Consensus 235 g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L-~Ls~N~l~~~~p~~~ 313 (955)
+.+|..+.++++|++|+++.+... +..|.+.+. +..+.++++|+.| .+.+... +.++..+
T Consensus 225 ~~l~~~~~~~~~L~~L~l~~~~~~-----------------~~~~~~~~l-~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~ 285 (594)
T 2p1m_B 225 EKLATLLQRAPQLEELGTGGYTAE-----------------VRPDVYSGL-SVALSGCKELRCLSGFWDAVP-AYLPAVY 285 (594)
T ss_dssp HHHHHHHHHCTTCSEEECSBCCCC-----------------CCHHHHHHH-HHHHHTCTTCCEEECCBTCCG-GGGGGGH
T ss_pred HHHHHHHhcCCcceEcccccccCc-----------------cchhhHHHH-HHHHhcCCCcccccCCcccch-hhHHHHH
Confidence 225555556666666665433210 122223322 1234455555555 2222211 1233333
Q ss_pred CCCCCCcEEecccccCCCCC-ccccCCCCCccEEEccCCcCcc-cCCcccCCCCCCCeeecCCCcccccCCCCCCCCCcc
Q 002186 314 ADLKNLRLLSLMYNEMSGTV-PESLVQLPSLEILFIWNNYFSG-SLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVL 391 (955)
Q Consensus 314 ~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l 391 (955)
..+++|+.|++++|.+++.. +..+..+++|+.|++++| ++. .++.....+++|+.|+++.+.-.|.
T Consensus 286 ~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~----------- 353 (594)
T 2p1m_B 286 SVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVM----------- 353 (594)
T ss_dssp HHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCS-----------
T ss_pred HhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCccccc-----------
Confidence 34556666666666544321 122445666666666665 321 1222222356666666643221000
Q ss_pred ceeeccCCCCCCCCCcCc-cCCCCCcEEECcCCccccccchhcc-CCCCCCEEECC--C----CcCCCCC-----Ccchh
Q 002186 392 FKLILFSNNFTGSLSPSL-SNCSSLVRLRLEDNSFSGEIPLKFS-QLPDINYIDLS--R----NGFTGGI-----PTDIN 458 (955)
Q Consensus 392 ~~l~l~~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~i-----p~~~~ 458 (955)
...+.+++.....+ ..+++|+.|.++.|++++..+..+. .+++|+.|+++ + |.++... +..+.
T Consensus 354 ----~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~ 429 (594)
T 2p1m_B 354 ----EPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVE 429 (594)
T ss_dssp ----SCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHH
T ss_pred ----ccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHh
Confidence 00111111100111 2367788887777777766555554 47788888887 3 4444211 11244
Q ss_pred hccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceEeccccccccccCCCC-Ccccccce
Q 002186 459 QASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESV-SNCVELER 537 (955)
Q Consensus 459 ~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g~~p~~~-~~l~~L~~ 537 (955)
.+++|+.|+++++ +.+..+..+.. .+++|+.|++++|.+++..+..+ .++++|+.
T Consensus 430 ~~~~L~~L~L~~~--l~~~~~~~l~~----------------------~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~ 485 (594)
T 2p1m_B 430 HCKDLRRLSLSGL--LTDKVFEYIGT----------------------YAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRK 485 (594)
T ss_dssp HCTTCCEEECCSS--CCHHHHHHHHH----------------------HCTTCCEEEEESCCSSHHHHHHHHHHCTTCCE
T ss_pred hCCCccEEeecCc--ccHHHHHHHHH----------------------hchhccEeeccCCCCcHHHHHHHHhcCCCcCE
Confidence 5667777777552 11111111111 12233444444444333222222 34555666
Q ss_pred eeeccccccccchh-hhcCCCCCcEEECCCCCCccccCCCc-CCCCCCcEEECCCC
Q 002186 538 IDLANNKLIGSIPE-VLARLPVLGVLDLSHNSLSGQIPAKF-GSCSSLTVLNVSFN 591 (955)
Q Consensus 538 L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ls~N 591 (955)
|+|++|.+++..+. ....+++|+.|+|++|.++......+ ..++.|+...+..+
T Consensus 486 L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~ 541 (594)
T 2p1m_B 486 LEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDER 541 (594)
T ss_dssp EEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSS
T ss_pred EECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCC
Confidence 66666665443332 23345566666666666543322222 23444444444433
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.8e-27 Score=280.32 Aligned_cols=402 Identities=14% Similarity=0.148 Sum_probs=228.7
Q ss_pred CCCCcEEECCCCcCcccCCcccc-CCCCCCEEEccCC-cCCcc-CCccccCCCCCcEEeCCCCCCCCCCchhhc----CC
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRN-NFSGH-FPGGIQSLRNLLVLDAFSNSFSGSVPAEIS----QL 172 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~----~L 172 (955)
+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 68999999999999887777776 7999999999999 45432 444556899999999999998876655554 67
Q ss_pred CcceEEEecCCC--Ccc-cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEeccccc-------ccCCCCcccc
Q 002186 173 EHLKVLNLAGSY--FSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNF-------YQGNIPWQLG 242 (955)
Q Consensus 173 ~~L~~L~Ls~n~--l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~-------l~g~~p~~~~ 242 (955)
++|++|+|++|. ++. .++..+.++++|++|+|++|...+.+|..+..+++|++|+++.+. +.+ ++..+.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~ 262 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALS 262 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHH
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHh
Confidence 799999999997 221 112223567999999999994333488889999999999976543 222 334566
Q ss_pred CCCCCcEE-eccCCCCCCCCCccccCCCCCCEEEeccccccccCCc-cCcCCCccCEEEccCCCCCCC-CCcccCCCCCC
Q 002186 243 NMSEVQYL-DIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPW-EFSRVTTLKSLDLSDNRLSGP-IPESFADLKNL 319 (955)
Q Consensus 243 ~l~~L~~L-~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L 319 (955)
++++|+.| .+.+... +.++..+..+++|++|++++|.+++.... .+..+++|++|++++| +... ++.....+++|
T Consensus 263 ~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L 340 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDL 340 (594)
T ss_dssp TCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTC
T ss_pred cCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCC
Confidence 77777777 3332221 22333344556677777776665432211 1345566666666655 2211 11112235566
Q ss_pred cEEeccc---------ccCCCCCcccc-CCCCCccEEEccCCcCcccCCcccC-CCCCCCeeecCCCcccccCCCCCCCC
Q 002186 320 RLLSLMY---------NEMSGTVPESL-VQLPSLEILFIWNNYFSGSLPENLG-RNSKLRWVDVSTNNFNGSIPPDICSG 388 (955)
Q Consensus 320 ~~L~Ls~---------N~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~p~~~~-~~~~L~~L~ls~N~l~g~ip~~~~~~ 388 (955)
+.|+++. +.+++.....+ ..+++|+.|.++.|.+++..+..+. .+++|+.|+++.|...+
T Consensus 341 ~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~--------- 411 (594)
T 2p1m_B 341 RELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKA--------- 411 (594)
T ss_dssp CEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTC---------
T ss_pred CEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCC---------
Confidence 6666532 22222111111 1245555555555555443332222 24445555444111000
Q ss_pred CccceeeccCCCCCC-----CCCcCccCCCCCcEEECcCCccccccchhccC-CCCCCEEECCCCcCCCCCCcch-hhcc
Q 002186 389 GVLFKLILFSNNFTG-----SLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQ-LPDINYIDLSRNGFTGGIPTDI-NQAS 461 (955)
Q Consensus 389 ~~l~~l~l~~n~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~ip~~~-~~~~ 461 (955)
-++++. .++..+..+++|+.|++++ .+++..+..+.. +++|++|+|++|.+++..+..+ ..++
T Consensus 412 ---------~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 481 (594)
T 2p1m_B 412 ---------PDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCD 481 (594)
T ss_dssp ---------CCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCT
T ss_pred ---------cccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCC
Confidence 011110 0011133455566666654 444443333333 5555555555555543222222 2233
Q ss_pred CCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceEeccccccccccC-CCCCcccccceeee
Q 002186 462 KLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIP-ESVSNCVELERIDL 540 (955)
Q Consensus 462 ~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g~~p-~~~~~l~~L~~L~L 540 (955)
+|++|++++| .+++..+ ..+..+++|+.|++
T Consensus 482 ~L~~L~L~~n------------------------------------------------~~~~~~~~~~~~~l~~L~~L~l 513 (594)
T 2p1m_B 482 SLRKLEIRDC------------------------------------------------PFGDKALLANASKLETMRSLWM 513 (594)
T ss_dssp TCCEEEEESC------------------------------------------------SCCHHHHHHTGGGGGGSSEEEE
T ss_pred CcCEEECcCC------------------------------------------------CCcHHHHHHHHHhCCCCCEEee
Confidence 4444444433 3322222 23345788999999
Q ss_pred ccccccccchhhh-cCCCCCcEEECCCCCCcc
Q 002186 541 ANNKLIGSIPEVL-ARLPVLGVLDLSHNSLSG 571 (955)
Q Consensus 541 s~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~ 571 (955)
++|+++..-...+ ..+|.|+...+..+.-..
T Consensus 514 ~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~~ 545 (594)
T 2p1m_B 514 SSCSVSFGACKLLGQKMPKLNVEVIDERGAPD 545 (594)
T ss_dssp ESSCCBHHHHHHHHHHCTTEEEEEECSSSCGG
T ss_pred eCCCCCHHHHHHHHHhCCCCEEEEecCCCccc
Confidence 9999865544445 567888887777665443
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-23 Score=228.75 Aligned_cols=223 Identities=20% Similarity=0.179 Sum_probs=135.6
Q ss_pred CCCcEEECCCCcCcccCCc---cccCCCCCCEEEccCCcCCccCCccc--cCCCCCcEEeCCCCCCCCCCc----hhhcC
Q 002186 101 NELVDLNLSHNSFSGQFPV---EIFNLTSLISLDISRNNFSGHFPGGI--QSLRNLLVLDAFSNSFSGSVP----AEISQ 171 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~LdL~~N~l~~~~p----~~~~~ 171 (955)
..++.|++.++.++...-. .+..+++|++|+|++|.+.+..|..+ ..+++|++|+|++|.+++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3567888888776532111 12345779999999999998888887 889999999999999887655 34567
Q ss_pred CCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCC--Cc--hhccCCCCCcEEecccccccCCCCc----cccC
Q 002186 172 LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ--IP--AELGMLKTVTHMEIGYNFYQGNIPW----QLGN 243 (955)
Q Consensus 172 L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p--~~l~~l~~L~~L~l~~n~l~g~~p~----~~~~ 243 (955)
+++|++|+|++|.+++..|..|+++++|++|+|++|++.+. ++ ..++.+++|++|++++|.++. +|. .+++
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 88899999999999888888888899999999999887642 22 122455566666666665531 111 1344
Q ss_pred CCCCcEEeccCCCCCCCCCccccCC---CCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCc
Q 002186 244 MSEVQYLDIAGANLSGSIPKELSNL---TKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLR 320 (955)
Q Consensus 244 l~~L~~L~Ls~n~l~~~~p~~l~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 320 (955)
+++|++||+++|.+++..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 4555555555555555444444443 34444444444444 2333322 3444444444444432 11 33334444
Q ss_pred EEecccccC
Q 002186 321 LLSLMYNEM 329 (955)
Q Consensus 321 ~L~Ls~N~l 329 (955)
.|++++|++
T Consensus 298 ~L~L~~N~l 306 (310)
T 4glp_A 298 NLTLDGNPF 306 (310)
T ss_dssp CEECSSTTT
T ss_pred EEECcCCCC
Confidence 444444443
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-22 Score=217.18 Aligned_cols=202 Identities=22% Similarity=0.295 Sum_probs=93.6
Q ss_pred ccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCc
Q 002186 121 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLE 200 (955)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 200 (955)
+.++++|+++++++|.++. +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 3445555555555555542 333332 4455555555555544445555555555555555555533221 4555555
Q ss_pred EEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccc
Q 002186 201 FLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ 280 (955)
Q Consensus 201 ~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~ 280 (955)
+|+|++|.++ .+|..+..+ ++|++|++++|++++..|..|..+++|++|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l------------------------~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTL------------------------PALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTC------------------------TTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccC------------------------CCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 5555555554 233333333 333333333333333333334444444444444444
Q ss_pred ccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcC
Q 002186 281 LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353 (955)
Q Consensus 281 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l 353 (955)
+++..+..|..+++|+.|+|++|+++...+..|..+++|+.|++++|+++ .+|..+..+++|+.|++++|.+
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 44433333444444444444444444433334444444555555555444 3444444444555555555544
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-25 Score=244.69 Aligned_cols=214 Identities=16% Similarity=0.205 Sum_probs=123.2
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
..|.+|.++.|+.. .+..++++.+.+.. ..+.....+.++.|++++|.+.+..+. +..+++|++|+|++|.+++
T Consensus 34 ~vc~~W~~~~~~~~--~~~~l~l~~~~~~~---~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 34 GVCKRWYRLASDES--LWQTLDLTGKNLHP---DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SSCHHHHHHHTCST--TSSEEECTTCBCCH---HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHHhcCch--hheeeccccccCCH---HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 34668999988752 34456666655542 112221125667777777777665544 4566777777777776665
Q ss_pred c-CCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCC-CCccc-CCCCcCCCCCCcEEEccCC-CCCCC-Cc
Q 002186 140 H-FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS-YFSGP-IPSQFGSFKSLEFLHLAGN-LLNDQ-IP 214 (955)
Q Consensus 140 ~-~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p 214 (955)
. +|..+..+++|++|+|++|.+++..|..++++++|++|+|++| .+++. +|..+.++++|++|++++| .+++. ++
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 187 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 187 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHH
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHH
Confidence 4 5666666777777777777666666666666677777777766 45542 4555666666666666666 66543 45
Q ss_pred hhccCCC-CCcEEecccc--ccc-CCCCccccCCCCCcEEeccCCC-CCCCCCccccCCCCCCEEEeccc
Q 002186 215 AELGMLK-TVTHMEIGYN--FYQ-GNIPWQLGNMSEVQYLDIAGAN-LSGSIPKELSNLTKLESLFLFRN 279 (955)
Q Consensus 215 ~~l~~l~-~L~~L~l~~n--~l~-g~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~l~~l~~L~~L~L~~N 279 (955)
..+..++ +|++|++++| .++ +.+|..+.++++|++|++++|. +++..+..+..+++|++|++++|
T Consensus 188 ~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 188 VAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp HHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred HHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 5555555 5555555555 232 2334444445555555555554 33334444444444444444444
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-22 Score=216.66 Aligned_cols=203 Identities=19% Similarity=0.227 Sum_probs=169.3
Q ss_pred ccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCc
Q 002186 145 IQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVT 224 (955)
Q Consensus 145 ~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 224 (955)
++++++|+.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++. |
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~---------- 71 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-Q---------- 71 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-E----------
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-c----------
Confidence 566777777777777776 4555543 5677777777777766667777777777777777766532 1
Q ss_pred EEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCC
Q 002186 225 HMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304 (955)
Q Consensus 225 ~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 304 (955)
. .+.+++|++|++++|.++ .+|..+..+++|++|++++|++++..+..|..+++|++|+|++|+
T Consensus 72 --------------~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 72 --------------V-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp --------------C-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred --------------C-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 1 146678888888888887 578888999999999999999999888899999999999999999
Q ss_pred CCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCccc
Q 002186 305 LSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 378 (955)
Q Consensus 305 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~ 378 (955)
+++..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|+++ .+|..+....+|+.+++++|.+.
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 99988888999999999999999999777777889999999999999998 68888888899999999999886
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-23 Score=245.80 Aligned_cols=179 Identities=13% Similarity=0.131 Sum_probs=141.1
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---------hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||.||+|.. .++.+|+|+...... ..+.+.+|++++++++|||||++..++...+..|+||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 456899999999999954 578899998643211 1345789999999999999997777777788889999
Q ss_pred eecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---
Q 002186 766 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--- 842 (955)
|||++|+|.++++. +..++.|+++||+|||+. +|+||||||+|||++. .+||+|||+++.......
T Consensus 419 E~~~ggsL~~~l~~------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 419 SYINGKLAKDVIED------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp ECCCSEEHHHHSTT------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred ECCCCCCHHHHHHH------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 99999999999987 568999999999999999 9999999999999998 999999999986543211
Q ss_pred ------CCcccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCC
Q 002186 843 ------SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLT 885 (955)
Q Consensus 843 ------~~~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~ 885 (955)
....++++|++||+... ..|+..+|+||..+-.+|.+-++.++
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 11235677888998876 55777889999999888888776554
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=213.18 Aligned_cols=197 Identities=18% Similarity=0.191 Sum_probs=136.1
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCc-CCccCCccccCCCCCcEEeCCC-CCCCCCCchhhcCCCcceEE
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN-FSGHFPGGIQSLRNLLVLDAFS-NSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~LdL~~-N~l~~~~p~~~~~L~~L~~L 178 (955)
..|++|+|++|++++..+..|.++++|++|++++|. +++..+..|..+++|++|++++ |.+++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 468889999999988777788889999999999996 7777777888888888888888 88887666778888888888
Q ss_pred EecCCCCcccCCCCcCCCCCCc---EEEccCC-CCCCCCchhccCCCCCc-EEecccccccCCCCccccCCCCCcEEecc
Q 002186 179 NLAGSYFSGPIPSQFGSFKSLE---FLHLAGN-LLNDQIPAELGMLKTVT-HMEIGYNFYQGNIPWQLGNMSEVQYLDIA 253 (955)
Q Consensus 179 ~Ls~n~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls 253 (955)
+|++|.+++ +|. |+.+++|+ +|++++| .+++..+..+..+++|+ .|++++|
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n---------------------- 166 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNN---------------------- 166 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSC----------------------
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCC----------------------
Confidence 888888876 665 77777777 8888888 77655444455555555 5555554
Q ss_pred CCCCCCCCCccccCCCCCCEEEecccc-ccccCCccCcCC-CccCEEEccCCCCCCCCCcccCCCCCCcEEecccc
Q 002186 254 GANLSGSIPKELSNLTKLESLFLFRNQ-LAGQVPWEFSRV-TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327 (955)
Q Consensus 254 ~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 327 (955)
.++ .+|......++|++|++++|+ +++..+..|..+ ++|+.|++++|++++. |.. .+++|+.|+++++
T Consensus 167 --~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 167 --GFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp --CCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred --CCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 444 222222222556666666663 555555556666 6666666666666643 322 4556666666544
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=3e-24 Score=240.53 Aligned_cols=226 Identities=23% Similarity=0.235 Sum_probs=144.8
Q ss_pred EEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCC----ccccCCC-CCcEEeCCCCCCCCCCchhhcCC-----Cc
Q 002186 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFP----GGIQSLR-NLLVLDAFSNSFSGSVPAEISQL-----EH 174 (955)
Q Consensus 105 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~LdL~~N~l~~~~p~~~~~L-----~~ 174 (955)
.++|++|.++|.+|..+...++|++|||++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35788888888888777777778888888888887666 6777787 88888888888887777777664 88
Q ss_pred ceEEEecCCCCcccCCCCc----CCC-CCCcEEEccCCCCCCCCchhcc----C-CCCCcEEecccccccCCC----Ccc
Q 002186 175 LKVLNLAGSYFSGPIPSQF----GSF-KSLEFLHLAGNLLNDQIPAELG----M-LKTVTHMEIGYNFYQGNI----PWQ 240 (955)
Q Consensus 175 L~~L~Ls~n~l~~~~p~~~----~~l-~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~l~~n~l~g~~----p~~ 240 (955)
|++|+|++|.+++..+..+ ..+ ++|++|+|++|.+++..+..+. . .++|++|++++|.+.... +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 8888888888876665543 334 7888888888888766655443 2 246777777777666432 223
Q ss_pred ccCCC-CCcEEeccCCCCCCCCCcccc----CC-CCCCEEEecccccccc----CCccCcC-CCccCEEEccCCCCCCCC
Q 002186 241 LGNMS-EVQYLDIAGANLSGSIPKELS----NL-TKLESLFLFRNQLAGQ----VPWEFSR-VTTLKSLDLSDNRLSGPI 309 (955)
Q Consensus 241 ~~~l~-~L~~L~Ls~n~l~~~~p~~l~----~l-~~L~~L~L~~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~ 309 (955)
+..++ +|++|++++|.+++..+..+. .. ++|++|+|++|.+++. ++..+.. .++|++|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 33443 666777776666655543332 23 4666666666666542 2222322 235666666666665443
Q ss_pred C----cccCCCCCCcEEecccccCC
Q 002186 310 P----ESFADLKNLRLLSLMYNEMS 330 (955)
Q Consensus 310 p----~~~~~l~~L~~L~Ls~N~l~ 330 (955)
+ ..+..+++|+.|++++|.+.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~ 266 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVK 266 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHT
T ss_pred HHHHHHHHhcCCCccEEEeccCCcc
Confidence 3 22344455555555555533
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-24 Score=236.48 Aligned_cols=220 Identities=20% Similarity=0.251 Sum_probs=151.1
Q ss_pred CCcEEECCCCcCcccCCccccCC--CCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCC-CchhhcCCCcceEE
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNL--TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS-VPAEISQLEHLKVL 178 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~-~p~~~~~L~~L~~L 178 (955)
.++.+|+++|.+. |..+..+ +++++|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+.++++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3678999988876 4566666 8899999999988877665 55788899999998888765 77778888888888
Q ss_pred EecCCCCcccCCCCcCCCCCCcEEEccCC-CCCC-CCchhccCCCCCcEEecccc-cccCC-CCccccCCC-CCcEEecc
Q 002186 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGN-LLND-QIPAELGMLKTVTHMEIGYN-FYQGN-IPWQLGNMS-EVQYLDIA 253 (955)
Q Consensus 179 ~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~-~~p~~l~~l~~L~~L~l~~n-~l~g~-~p~~~~~l~-~L~~L~Ls 253 (955)
+|++|.+++..|..|+.+++|++|+|++| .+++ .+|..+..+++|++|++++| .+++. ++..+.+++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 88888888777888888888888888888 5665 25666777777777777777 66543 455566666 67777776
Q ss_pred CC--CCC-CCCCccccCCCCCCEEEecccc-ccccCCccCcCCCccCEEEccCCCCCCCCCc---ccCCCCCCcEEeccc
Q 002186 254 GA--NLS-GSIPKELSNLTKLESLFLFRNQ-LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPE---SFADLKNLRLLSLMY 326 (955)
Q Consensus 254 ~n--~l~-~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~ 326 (955)
+| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|++++|. +..+. .++.+++|+.|++++
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~ 281 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFG 281 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTT
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccC
Confidence 66 343 3344455556666666666665 444444455555566666665553 12222 344455555555554
Q ss_pred c
Q 002186 327 N 327 (955)
Q Consensus 327 N 327 (955)
|
T Consensus 282 ~ 282 (336)
T 2ast_B 282 I 282 (336)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-24 Score=246.24 Aligned_cols=94 Identities=18% Similarity=0.234 Sum_probs=52.3
Q ss_pred CCccccCCCCCCEEEccCCcCCccCC----ccccCCCCCcEEeCCCC---CCCCCCchhh-------cCCCcceEEEecC
Q 002186 117 FPVEIFNLTSLISLDISRNNFSGHFP----GGIQSLRNLLVLDAFSN---SFSGSVPAEI-------SQLEHLKVLNLAG 182 (955)
Q Consensus 117 ~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~LdL~~N---~l~~~~p~~~-------~~L~~L~~L~Ls~ 182 (955)
++..+..+++|++|+|++|.+....+ ..|..+++|++|+|++| ++++.+|..+ .++++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 44455556666666666666654422 23555666666666654 3334445443 4556666666666
Q ss_pred CCCcc----cCCCCcCCCCCCcEEEccCCCCC
Q 002186 183 SYFSG----PIPSQFGSFKSLEFLHLAGNLLN 210 (955)
Q Consensus 183 n~l~~----~~p~~~~~l~~L~~L~L~~N~l~ 210 (955)
|.+++ .+|..+.++++|++|+|++|.++
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 66554 34555555666666666666554
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-22 Score=221.12 Aligned_cols=202 Identities=18% Similarity=0.154 Sum_probs=177.3
Q ss_pred CCCCcEEECCCCcCcccCCccc--cCCCCCCEEEccCCcCCccCC----ccccCCCCCcEEeCCCCCCCCCCchhhcCCC
Q 002186 100 FNELVDLNLSHNSFSGQFPVEI--FNLTSLISLDISRNNFSGHFP----GGIQSLRNLLVLDAFSNSFSGSVPAEISQLE 173 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~ 173 (955)
+..|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|.+++..|..+++++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4579999999999999999998 899999999999999998766 4556899999999999999998889999999
Q ss_pred cceEEEecCCCCccc--C--CCCcCCCCCCcEEEccCCCCCCCCch----hccCCCCCcEEecccccccCCCCccccCC-
Q 002186 174 HLKVLNLAGSYFSGP--I--PSQFGSFKSLEFLHLAGNLLNDQIPA----ELGMLKTVTHMEIGYNFYQGNIPWQLGNM- 244 (955)
Q Consensus 174 ~L~~L~Ls~n~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~l~~l~~L~~L~l~~n~l~g~~p~~~~~l- 244 (955)
+|++|+|++|.+.+. + +..++.+++|++|+|++|+++. +|. .++.+++|++|++++|.+.+..|..++.+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 999999999998753 2 3345889999999999999963 333 35788999999999999999888888877
Q ss_pred --CCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCC
Q 002186 245 --SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307 (955)
Q Consensus 245 --~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 307 (955)
++|++|++++|.++ .+|..+. ++|++|+|++|++++. |. +..+++|+.|+|++|+++.
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 6787774 7999999999999975 33 6788999999999999974
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.7e-22 Score=202.91 Aligned_cols=187 Identities=20% Similarity=0.204 Sum_probs=146.7
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
.+.|+|.+|.|+.... + .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++
T Consensus 4 ~C~C~~~~v~c~~~~l--~-----------~~p~~~----~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 66 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGR--T-----------SVPTGI----PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS 66 (208)
T ss_dssp TCEEETTEEECCSSCC--S-----------SCCSCC----CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC
T ss_pred CCEECCCEEEecCCCc--c-----------CCCCCC----CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCc
Confidence 4568999999986321 1 122222 4578999999999998777778899999999999999997
Q ss_pred cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccC
Q 002186 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219 (955)
Q Consensus 140 ~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 219 (955)
..+..|..+++|++|+|++|.+++..+..+.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..+..
T Consensus 67 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 146 (208)
T 2o6s_A 67 LPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDR 146 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred cChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhcc
Confidence 77777899999999999999999776777889999999999999998777777889999999999999998766666777
Q ss_pred CCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCC
Q 002186 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTK 270 (955)
Q Consensus 220 l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~ 270 (955)
+++|+.|++++|.+.+ .+++|++|+++.|+++|.+|.+++.++.
T Consensus 147 l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 147 LTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 8888888887776554 3345666777777777777766665543
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.87 E-value=5.9e-22 Score=208.11 Aligned_cols=198 Identities=16% Similarity=0.231 Sum_probs=164.3
Q ss_pred CCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCC-CCCCCchhhcCCCcceEEEecC-CCCcccCCCCcCCCCCCcEE
Q 002186 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQLEHLKVLNLAG-SYFSGPIPSQFGSFKSLEFL 202 (955)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~-l~~~~p~~~~~L~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L 202 (955)
++|++|+|++|++++..+..|+.+++|++|++++|. +++..+..|.++++|++|+|++ |.+++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 389999999999998888889999999999999997 8776667889999999999998 89987777788889999999
Q ss_pred EccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCc---EEeccCC-CCCCCCCccccCCCCCC-EEEec
Q 002186 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ---YLDIAGA-NLSGSIPKELSNLTKLE-SLFLF 277 (955)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~---~L~Ls~n-~l~~~~p~~l~~l~~L~-~L~L~ 277 (955)
++++|.+++ +|. + .++++|+ +|++++| .+++..+..|.++++|+ +|+++
T Consensus 111 ~l~~n~l~~-lp~-~------------------------~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~ 164 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-L------------------------TKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLY 164 (239)
T ss_dssp EEEEECCCS-CCC-C------------------------TTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECC
T ss_pred eCCCCCCcc-ccc-c------------------------ccccccccccEEECCCCcchhhcCcccccchhcceeEEEcC
Confidence 999888865 443 3 3344444 8888888 78776677789999999 99999
Q ss_pred cccccccCCccCcCCCccCEEEccCCC-CCCCCCcccCCC-CCCcEEecccccCCCCCccccCCCCCccEEEccCCc
Q 002186 278 RNQLAGQVPWEFSRVTTLKSLDLSDNR-LSGPIPESFADL-KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNY 352 (955)
Q Consensus 278 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 352 (955)
+|+++...+..|.. ++|+.|++++|+ +++..+..|..+ ++|+.|++++|++++. |.. .+++|+.|+++++.
T Consensus 165 ~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 165 NNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNTW 237 (239)
T ss_dssp SCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC-
T ss_pred CCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCcc
Confidence 99999655555655 899999999995 998778889999 9999999999999854 443 67889999998763
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-23 Score=235.49 Aligned_cols=252 Identities=20% Similarity=0.226 Sum_probs=198.0
Q ss_pred EEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCc----hhhcCCC-cceEEEecCCCCcccCCCCcCCC-----CC
Q 002186 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP----AEISQLE-HLKVLNLAGSYFSGPIPSQFGSF-----KS 198 (955)
Q Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p----~~~~~L~-~L~~L~Ls~n~l~~~~p~~~~~l-----~~ 198 (955)
+++|++|.++|.+|..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|.+++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57899999999999888888889999999999998777 7788898 99999999999998777777765 99
Q ss_pred CcEEEccCCCCCCCCchhccC----C-CCCcEEecccccccCCCCcccc----C-CCCCcEEeccCCCCCCCCC----cc
Q 002186 199 LEFLHLAGNLLNDQIPAELGM----L-KTVTHMEIGYNFYQGNIPWQLG----N-MSEVQYLDIAGANLSGSIP----KE 264 (955)
Q Consensus 199 L~~L~L~~N~l~~~~p~~l~~----l-~~L~~L~l~~n~l~g~~p~~~~----~-l~~L~~L~Ls~n~l~~~~p----~~ 264 (955)
|++|+|++|.+++..+..+.. + ++|++|++++|.+++..+..+. . .++|++|++++|.+++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 999999999998877775544 4 8999999999998877665543 3 3689999999999885443 33
Q ss_pred ccCCC-CCCEEEeccccccccCCccCc----CC-CccCEEEccCCCCCCC----CCcccCC-CCCCcEEecccccCCCCC
Q 002186 265 LSNLT-KLESLFLFRNQLAGQVPWEFS----RV-TTLKSLDLSDNRLSGP----IPESFAD-LKNLRLLSLMYNEMSGTV 333 (955)
Q Consensus 265 l~~l~-~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~ 333 (955)
+..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|.++.. ++..+.. .++|+.|++++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45555 899999999999877664443 34 5899999999998863 3444544 358999999999988754
Q ss_pred c----cccCCCCCccEEEccCCcCccc-------CCcccCCCCCCCeeecCCCccccc
Q 002186 334 P----ESLVQLPSLEILFIWNNYFSGS-------LPENLGRNSKLRWVDVSTNNFNGS 380 (955)
Q Consensus 334 p----~~l~~l~~L~~L~L~~N~l~~~-------~p~~~~~~~~L~~L~ls~N~l~g~ 380 (955)
+ ..+..+++|+.|++++|.+.+. ++..+..+++|+.||+++|.+.+.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 4 3456778899999998885432 334566777788888888887654
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.86 E-value=9.6e-24 Score=238.79 Aligned_cols=233 Identities=17% Similarity=0.174 Sum_probs=155.1
Q ss_pred CCCCcEEECCCCcCcccCC----ccccCCCCCCEEEccCC---cCCccCCccc-------cCCCCCcEEeCCCCCCCC--
Q 002186 100 FNELVDLNLSHNSFSGQFP----VEIFNLTSLISLDISRN---NFSGHFPGGI-------QSLRNLLVLDAFSNSFSG-- 163 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p----~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~LdL~~N~l~~-- 163 (955)
++.|+.|+|++|.+++..+ ..+..+++|++|+|++| ++.+.+|..+ ..+++|++|+|++|.+++
T Consensus 31 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 110 (386)
T 2ca6_A 31 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 110 (386)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHH
Confidence 6789999999999987644 45778999999999996 5566777665 789999999999999997
Q ss_pred --CCchhhcCCCcceEEEecCCCCcccCCCCcC----CC---------CCCcEEEccCCCCC-CCCc---hhccCCCCCc
Q 002186 164 --SVPAEISQLEHLKVLNLAGSYFSGPIPSQFG----SF---------KSLEFLHLAGNLLN-DQIP---AELGMLKTVT 224 (955)
Q Consensus 164 --~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~p---~~l~~l~~L~ 224 (955)
.+|..+.++++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ +.+| ..+..+++|+
T Consensus 111 ~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 190 (386)
T 2ca6_A 111 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH 190 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcC
Confidence 4788899999999999999999754444333 33 89999999999987 3444 3555666777
Q ss_pred EEeccccccc--C---CCCccccCCCCCcEEeccCCCCC----CCCCccccCCCCCCEEEecccccccc----CCccC--
Q 002186 225 HMEIGYNFYQ--G---NIPWQLGNMSEVQYLDIAGANLS----GSIPKELSNLTKLESLFLFRNQLAGQ----VPWEF-- 289 (955)
Q Consensus 225 ~L~l~~n~l~--g---~~p~~~~~l~~L~~L~Ls~n~l~----~~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~-- 289 (955)
.|++++|.+. | .+|..+.++++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ++..+
T Consensus 191 ~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~ 270 (386)
T 2ca6_A 191 TVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSK 270 (386)
T ss_dssp EEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHT
T ss_pred EEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhh
Confidence 7777776655 2 22334555566666666666553 34455555555555555555555443 22233
Q ss_pred cCCCccCEEEccCCCCCC----CCCccc-CCCCCCcEEecccccCCCC
Q 002186 290 SRVTTLKSLDLSDNRLSG----PIPESF-ADLKNLRLLSLMYNEMSGT 332 (955)
Q Consensus 290 ~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~ 332 (955)
..+++|++|+|++|.+++ .+|..+ .++++|+.|++++|.+++.
T Consensus 271 ~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 271 LENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp CSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred ccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 224555555555555554 234333 3345555555555555443
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.3e-21 Score=200.88 Aligned_cols=110 Identities=19% Similarity=0.209 Sum_probs=72.4
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
..+.++++++.++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3566777777776 4555444 567777777777776666667777777777777777766666666666677777777
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 214 (955)
+|.+++..+..|..+++|++|+|++|.+++..+
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 124 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPS 124 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcCh
Confidence 666665555666666666666666666654333
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.6e-21 Score=210.05 Aligned_cols=192 Identities=23% Similarity=0.408 Sum_probs=108.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+++|+.|++++|.++. +| .+..+++|++|+|++|.+.+..+ +..+++|++|+|++|.+++ + +.+.++++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~-~~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-V-SAIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-C-GGGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-c-hhhcCCCCCCEEE
Confidence 3445555555555542 22 34555555555555555543322 5555555555555555543 1 2344555555555
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++. |. +..+++|++|++++|.++ +..+ ++++++|++|++++|.+++
T Consensus 114 l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~------------------------~~~~--l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 114 LTSTQITDV-TP-LAGLSNLQVLYLDLNQIT------------------------NISP--LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CTTSCCCCC-GG-GTTCTTCCEEECCSSCCC------------------------CCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCc-hh-hcCCCCCCEEECCCCccC------------------------cCcc--ccCCCCccEEEccCCcCCC
Confidence 555555432 21 445555555555555444 3222 5556666666666666664
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 331 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 331 (955)
..+ +..+++|++|++++|++++..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|.+++
T Consensus 166 ~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 166 LTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 322 6667777777777777765433 667777777777777777544 36777788888888887764
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.8e-21 Score=209.86 Aligned_cols=209 Identities=22% Similarity=0.362 Sum_probs=160.1
Q ss_pred EEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC
Q 002186 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (955)
Q Consensus 105 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~ 184 (955)
.+.+..+.+...+ .+..+++|++|++++|.+.. +| .+..+++|++|+|++|.+++.. . +.++++|++|+|++|.
T Consensus 23 ~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~-~-~~~l~~L~~L~L~~n~ 96 (308)
T 1h6u_A 23 KIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLA-P-LKNLTKITELELSGNP 96 (308)
T ss_dssp HHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG-G-GTTCCSCCEEECCSCC
T ss_pred HHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCCh-h-HccCCCCCEEEccCCc
Confidence 3445555555433 24567788888888887764 34 5777777777777777777533 3 7777777777777777
Q ss_pred CcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCcc
Q 002186 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264 (955)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 264 (955)
+++. | .+..+++|++|+|++|.+++ +| .+.++++|++|++++|.+++..+
T Consensus 97 l~~~-~-~~~~l~~L~~L~l~~n~l~~-------------------------~~-~l~~l~~L~~L~l~~n~l~~~~~-- 146 (308)
T 1h6u_A 97 LKNV-S-AIAGLQSIKTLDLTSTQITD-------------------------VT-PLAGLSNLQVLYLDLNQITNISP-- 146 (308)
T ss_dssp CSCC-G-GGTTCTTCCEEECTTSCCCC-------------------------CG-GGTTCTTCCEEECCSSCCCCCGG--
T ss_pred CCCc-h-hhcCCCCCCEEECCCCCCCC-------------------------ch-hhcCCCCCCEEECCCCccCcCcc--
Confidence 7642 2 46667777777777766653 22 26678889999999999986544
Q ss_pred ccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCcc
Q 002186 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLE 344 (955)
Q Consensus 265 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 344 (955)
+..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+
T Consensus 147 l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~ 220 (308)
T 1h6u_A 147 LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLF 220 (308)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCC
T ss_pred ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCC
Confidence 8899999999999999997544 8899999999999999997544 8999999999999999997653 88999999
Q ss_pred EEEccCCcCcc
Q 002186 345 ILFIWNNYFSG 355 (955)
Q Consensus 345 ~L~L~~N~l~~ 355 (955)
.|++++|.+++
T Consensus 221 ~L~l~~N~i~~ 231 (308)
T 1h6u_A 221 IVTLTNQTITN 231 (308)
T ss_dssp EEEEEEEEEEC
T ss_pred EEEccCCeeec
Confidence 99999999975
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.85 E-value=8e-22 Score=230.85 Aligned_cols=193 Identities=24% Similarity=0.350 Sum_probs=106.6
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
|+.|+|++|.+++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|.+++ +|. +.+ +|++|+|++
T Consensus 61 L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 61 FSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp CSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred ccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 4556666666665 554442 56666666666666 445 345666666666666665 554 443 666666666
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p 262 (955)
|.+++ +|. .+++|++|+|++|.+++ +|. .+++|+.|++++|.+++ +|. +. ++|++|++++|.++ .+|
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 66665 444 45666666666666654 333 23344444444443333 332 22 34444444444444 222
Q ss_pred ccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCC
Q 002186 263 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (955)
Q Consensus 263 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 340 (955)
. +.. +| +.....|+.|+|++|+|+ .+|..+..+++|+.|++++|.+++.+|..+..+
T Consensus 197 ~-~~~--~L-----------------~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 197 A-VPV--RN-----------------HHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp C-CC---------------------------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred h-HHH--hh-----------------hcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 2 211 11 011122377777777777 366667677888888888888877777766554
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=207.66 Aligned_cols=246 Identities=16% Similarity=0.097 Sum_probs=152.2
Q ss_pred CCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCcc
Q 002186 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (955)
Q Consensus 61 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (955)
+.|+|..|.|+... ++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.
T Consensus 7 C~C~~~~v~C~~~~------------Lt-~iP~~l----~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~ 69 (350)
T 4ay9_X 7 CHCSNRVFLCQESK------------VT-EIPSDL----PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEV 69 (350)
T ss_dssp SEEETTEEEEESTT------------CC-SCCTTC----CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCE
T ss_pred cEeeCCEEEecCCC------------CC-ccCcCc----CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCc
Confidence 34788888887522 21 234332 34688888998888866666788888888888888888765
Q ss_pred CC-ccccCCCCCcE-EeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccC-CCCCCCCchhc
Q 002186 141 FP-GGIQSLRNLLV-LDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG-NLLNDQIPAEL 217 (955)
Q Consensus 141 ~p-~~~~~l~~L~~-LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l 217 (955)
+| ..|.++++|+. ++++.|++++..|..|.++++|++|++++|.+++..+..+....++..|++.+ |.+....+..+
T Consensus 70 i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f 149 (350)
T 4ay9_X 70 IEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSF 149 (350)
T ss_dssp ECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSS
T ss_pred cChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccch
Confidence 55 45788877664 56667888877777788888888888888888776666666777777777755 34443333333
Q ss_pred cCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecc-ccccccCCccCcCCCccC
Q 002186 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFR-NQLAGQVPWEFSRVTTLK 296 (955)
Q Consensus 218 ~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~ 296 (955)
..+. ..++.|++++|+++. +|......++|++|++.+ |.++...+..|..+++|+
T Consensus 150 ~~~~-----------------------~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~ 205 (350)
T 4ay9_X 150 VGLS-----------------------FESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPV 205 (350)
T ss_dssp TTSB-----------------------SSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCS
T ss_pred hhcc-----------------------hhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccc
Confidence 3322 235555555555553 333333445566666653 444433334566666667
Q ss_pred EEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCC
Q 002186 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNN 351 (955)
Q Consensus 297 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 351 (955)
+|||++|+|+...+..|. +|+.|.+.++.--..+| .+..+++|+.+++.++
T Consensus 206 ~LdLs~N~l~~lp~~~~~---~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 206 ILDISRTRIHSLPSYGLE---NLKKLRARSTYNLKKLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp EEECTTSCCCCCCSSSCT---TCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCH
T ss_pred hhhcCCCCcCccChhhhc---cchHhhhccCCCcCcCC-CchhCcChhhCcCCCC
Confidence 777777766654433333 33334333333233445 3566777777777654
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.9e-20 Score=189.69 Aligned_cols=177 Identities=16% Similarity=0.152 Sum_probs=121.1
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n 183 (955)
+.++.+++.++ .+|..+ .++|++|+|++|++++..+..|+.+++|++|++++|.+++..+..|.++++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 34667777776 345444 468999999999998777777888999999999999988766667788889999999999
Q ss_pred CCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCc
Q 002186 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (955)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 263 (955)
.+++..+..|.++++|++|+|++|.+++..+..+..+++|++|++++|.+++..+..+.++++|++|++++|.+.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~--- 163 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT--- 163 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC---
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC---
Confidence 88877667788888888888888888766555566666666666666655544444445555555555555544322
Q ss_pred cccCCCCCCEEEeccccccccCCccCc
Q 002186 264 ELSNLTKLESLFLFRNQLAGQVPWEFS 290 (955)
Q Consensus 264 ~l~~l~~L~~L~L~~N~l~~~~p~~~~ 290 (955)
+++|++|+++.|+++|.+|..++
T Consensus 164 ----~~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 164 ----CPGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp ----TTTTHHHHHHHHHCTTTBBCTTS
T ss_pred ----CCCHHHHHHHHHhCCceeeccCc
Confidence 23344444444444444444433
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.1e-20 Score=205.75 Aligned_cols=239 Identities=17% Similarity=0.177 Sum_probs=173.9
Q ss_pred EECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCch-hhcCCCcceE-EEecCC
Q 002186 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPA-EISQLEHLKV-LNLAGS 183 (955)
Q Consensus 106 L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~-~~~~L~~L~~-L~Ls~n 183 (955)
++.++++++ .+|..+ .+++++|+|++|+|+...++.|.++++|++|||++|.+.+.+|. .|.++++|++ +.+++|
T Consensus 14 v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N 90 (350)
T 4ay9_X 14 FLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 90 (350)
T ss_dssp EEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEET
T ss_pred EEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCC
Confidence 455677777 567665 36789999999999876667788899999999999888766654 5778877664 666778
Q ss_pred CCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccC-CCCCCCCC
Q 002186 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAG-ANLSGSIP 262 (955)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~-n~l~~~~p 262 (955)
+++...|..|.++++|++|++++|+++...+..+. ...++..|++.+ +++....+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~------------------------~~~~l~~l~l~~~~~i~~l~~ 146 (350)
T 4ay9_X 91 NLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKI------------------------HSLQKVLLDIQDNINIHTIER 146 (350)
T ss_dssp TCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTC------------------------CBSSCEEEEEESCTTCCEECT
T ss_pred cccccCchhhhhccccccccccccccccCCchhhc------------------------ccchhhhhhhccccccccccc
Confidence 88877788888888888888888888654443333 333455555544 34443344
Q ss_pred ccccCCC-CCCEEEeccccccccCCccCcCCCccCEEEccC-CCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCC
Q 002186 263 KELSNLT-KLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD-NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (955)
Q Consensus 263 ~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 340 (955)
..+..+. .++.|+|++|+++...+..| ..++|++|++++ |.++...++.|..+++|+.|++++|+++...+..+
T Consensus 147 ~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~--- 222 (350)
T 4ay9_X 147 NSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL--- 222 (350)
T ss_dssp TSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---
T ss_pred cchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh---
Confidence 4555554 68899999999997655555 567899999985 66776555679999999999999999996555444
Q ss_pred CCccEEEccCCcCcccCCcccCCCCCCCeeecCCCc
Q 002186 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376 (955)
Q Consensus 341 ~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~ 376 (955)
.+|+.|.+.++.--..+|. +..+++|+.++++++.
T Consensus 223 ~~L~~L~~l~~~~l~~lP~-l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 223 ENLKKLRARSTYNLKKLPT-LEKLVALMEASLTYPS 257 (350)
T ss_dssp TTCCEEECTTCTTCCCCCC-TTTCCSCCEEECSCHH
T ss_pred ccchHhhhccCCCcCcCCC-chhCcChhhCcCCCCc
Confidence 4556666555544446774 7889999999998764
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.1e-21 Score=207.07 Aligned_cols=130 Identities=13% Similarity=0.098 Sum_probs=108.2
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc-------------------hHHHHHHHHHHHhccCCCCceeEeEEE
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-------------------RIKIVSEFITRIGTVRHKNLIRLLGFC 755 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~-------------------~~~~~~~e~~~l~~l~H~niv~l~g~~ 755 (955)
..+.||+|+||.||+|...+|+.||||.++.+.. ....+.+|++++++++ | +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence 5588999999999999998899999999964321 2456789999999998 4 6666655
Q ss_pred EcCCeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 756 YNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 756 ~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
.. +..++||||+++|+|.+ +.. .....++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~----~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DFG~a~ 240 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV----ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDFPQSV 240 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC----SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCCTTCE
T ss_pred ec-cceEEEEEecCCCcHHH-cch----hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEECCCCe
Confidence 43 55699999999999998 532 23456999999999999999 999999999999999 9999999999986
Q ss_pred cc
Q 002186 836 LT 837 (955)
Q Consensus 836 ~~ 837 (955)
..
T Consensus 241 ~~ 242 (282)
T 1zar_A 241 EV 242 (282)
T ss_dssp ET
T ss_pred EC
Confidence 43
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=212.56 Aligned_cols=187 Identities=25% Similarity=0.403 Sum_probs=137.2
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEcc
Q 002186 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205 (955)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 205 (955)
+|++|+|++|.+++ +|..+ +++|++|+|++|.++ .+| ..+++|++|+|++|.+++ +|. |.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 78888998888886 66655 377888888888887 566 456788888888888876 666 555 77888888
Q ss_pred CCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccC
Q 002186 206 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV 285 (955)
Q Consensus 206 ~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 285 (955)
+|.+++ +|. . +++|++|++++|.+++ +|. .+++|++|+|++|++++ +
T Consensus 129 ~N~l~~-lp~---~------------------------l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 129 NNQLTM-LPE---L------------------------PALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp SSCCSC-CCC---C------------------------CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CCC---c------------------------CccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-c
Confidence 777765 443 2 4455555666666654 443 35667777777777766 4
Q ss_pred CccCcCCCccCEEEccCCCCCCCCCcccCCCCCC-------cEEecccccCCCCCccccCCCCCccEEEccCCcCcccCC
Q 002186 286 PWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL-------RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLP 358 (955)
Q Consensus 286 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 358 (955)
|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+++ .+|..+..+++|+.|++++|.+++.+|
T Consensus 176 p~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 176 PE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred ch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 44 54 67888888888887 4555 554 66 99999999999 578888889999999999999999999
Q ss_pred cccCCC
Q 002186 359 ENLGRN 364 (955)
Q Consensus 359 ~~~~~~ 364 (955)
..+..+
T Consensus 248 ~~l~~l 253 (571)
T 3cvr_A 248 ESLSQQ 253 (571)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 877654
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.8e-19 Score=185.07 Aligned_cols=159 Identities=23% Similarity=0.246 Sum_probs=124.2
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
.+.|+|.+|.|+... + +.+|..+ .+.|++|+|++|.+++..|..|.++++|++|+|++|++++
T Consensus 16 ~~~Cs~~~v~c~~~~--l-----------~~ip~~~----~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 78 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKR--H-----------ASVPAGI----PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA 78 (229)
T ss_dssp TCEEETTEEECTTSC--C-----------SSCCSCC----CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCEEeCCEeEccCCC--c-----------CccCCCC----CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC
Confidence 567999999998622 1 2333322 3578889999999998888888889999999999999887
Q ss_pred cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccC
Q 002186 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219 (955)
Q Consensus 140 ~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 219 (955)
..+..|..+++|++|||++|.+++..+..|..+++|++|+|++|.++ .+|..+..+++|++|+|++|++++..+..+..
T Consensus 79 i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 157 (229)
T 3e6j_A 79 LPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDR 157 (229)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred cChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhC
Confidence 66677888888888888888888776677788888888888888888 67888888888888888888887666666666
Q ss_pred CCCCcEEecccccccCC
Q 002186 220 LKTVTHMEIGYNFYQGN 236 (955)
Q Consensus 220 l~~L~~L~l~~n~l~g~ 236 (955)
+++|+.|++++|.+.+.
T Consensus 158 l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 158 LSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CTTCCEEECTTSCBCTT
T ss_pred CCCCCEEEeeCCCccCC
Confidence 77777777766665543
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-20 Score=230.03 Aligned_cols=264 Identities=19% Similarity=0.192 Sum_probs=119.5
Q ss_pred ChhhHHHHHHhhhhCCC-CCCCCCCCCCCCCCCCCCCCCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCC
Q 002186 24 NDPYSEALLSLKSELVD-DFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNE 102 (955)
Q Consensus 24 ~~~~~~all~~k~~~~~-~~~~l~~w~~~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~ 102 (955)
.+.++++|+++..+... ....-..|... ....+.|.++.++. .+++.++|..+++.+. +. ..
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-~~-------~~ 192 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGD-------STPSGTATNSAVST--PLTPKIELFANGKDEA-NQ-------AL 192 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCC-------CCccccCCCceecC--CccceEEeeCCCCCcc-hh-------hH
Confidence 35678999999887632 22334456433 24567899988875 5688888887777653 22 12
Q ss_pred CcEEECCCCcCcc---------cCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCC
Q 002186 103 LVDLNLSHNSFSG---------QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE 173 (955)
Q Consensus 103 L~~L~Ls~n~l~~---------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~ 173 (955)
++.++|++|.|.+ ..|..|..+++|++|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|+
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 270 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS 270 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT
T ss_pred hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC
Confidence 3445555554443 44677888888888888888887 56767778888888888888888 7788888888
Q ss_pred cceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCC-CcEEec
Q 002186 174 HLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSE-VQYLDI 252 (955)
Q Consensus 174 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~-L~~L~L 252 (955)
+|++|+|++|.++ .+|..|++|++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.+++.+|..+..+.. +..+++
T Consensus 271 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l 348 (727)
T 4b8c_D 271 NLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYL 348 (727)
T ss_dssp TCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhh
Confidence 8888888888888 67888888888888888888885 56777777777777777777777777766554322 223566
Q ss_pred cCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCC
Q 002186 253 AGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (955)
Q Consensus 253 s~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (955)
++|.+++.+|.. |+.|+++.|... - ...+.+.+..+..+..+..+....+++|-+.
T Consensus 349 ~~N~l~~~~p~~------l~~l~l~~n~~~---~-------------~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 349 RDNRPEIPLPHE------RRFIEINTDGEP---Q-------------REYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp HHCCCCCCCCCC---------------------------------------------------------------CCC
T ss_pred ccCcccCcCccc------cceeEeeccccc---c-------------cccCCccccccchhhcccccceeeeeccccc
Confidence 677776666643 334444444100 0 0011233334445556666667777777665
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.7e-19 Score=181.44 Aligned_cols=161 Identities=19% Similarity=0.240 Sum_probs=133.8
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCC-ccccCCCCCCEEEccCCcCC
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFP-VEIFNLTSLISLDISRNNFS 138 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~ 138 (955)
.+.|.|..+.|+. +.+. .+|..+ ...+++|+|++|.|++..| ..|..+++|++|+|++|+++
T Consensus 8 ~C~C~~~~l~~s~------------n~l~-~iP~~~----~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~ 70 (220)
T 2v70_A 8 KCRCEGTTVDCSN------------QKLN-KIPEHI----PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT 70 (220)
T ss_dssp TCEEETTEEECCS------------SCCS-SCCSCC----CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC
T ss_pred CCEECCCEeEeCC------------CCcc-cCccCC----CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC
Confidence 3446676666654 3333 245433 3457899999999998865 45889999999999999999
Q ss_pred ccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhcc
Q 002186 139 GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218 (955)
Q Consensus 139 ~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 218 (955)
+..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..+.
T Consensus 71 ~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 150 (220)
T 2v70_A 71 DIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFD 150 (220)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTT
T ss_pred EECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhc
Confidence 98888999999999999999999988888899999999999999999998899999999999999999999988888888
Q ss_pred CCCCCcEEecccccccCCC
Q 002186 219 MLKTVTHMEIGYNFYQGNI 237 (955)
Q Consensus 219 ~l~~L~~L~l~~n~l~g~~ 237 (955)
.+++|+.|++++|.+.+..
T Consensus 151 ~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 151 TLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TCTTCCEEECCSCCEECSG
T ss_pred CCCCCCEEEecCcCCcCCC
Confidence 8888888888888776543
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.79 E-value=9.8e-19 Score=180.63 Aligned_cols=158 Identities=22% Similarity=0.296 Sum_probs=130.7
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
.+.|.|..|.|.... +. .+|..+ ...|+.|+|++|.|++..+..|..+++|++|+|++|++++
T Consensus 8 ~C~C~~~~v~c~~~~------------l~-~iP~~l----~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~ 70 (220)
T 2v9t_B 8 ACTCSNNIVDCRGKG------------LT-EIPTNL----PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISE 70 (220)
T ss_dssp TSEEETTEEECTTSC------------CS-SCCSSC----CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCE
T ss_pred CCEECCCEEEcCCCC------------cC-cCCCcc----CcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCC
Confidence 455888888887522 11 233322 2578999999999998888899999999999999999999
Q ss_pred cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccC
Q 002186 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219 (955)
Q Consensus 140 ~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 219 (955)
..|..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..+..
T Consensus 71 ~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 150 (220)
T 2v9t_B 71 LAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSP 150 (220)
T ss_dssp ECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred cCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhC
Confidence 88999999999999999999999766666889999999999999999888889999999999999999998877777777
Q ss_pred CCCCcEEeccccccc
Q 002186 220 LKTVTHMEIGYNFYQ 234 (955)
Q Consensus 220 l~~L~~L~l~~n~l~ 234 (955)
+++|+.|++++|.+.
T Consensus 151 l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 151 LRAIQTMHLAQNPFI 165 (220)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred CCCCCEEEeCCCCcC
Confidence 777777777777654
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.78 E-value=5.7e-19 Score=209.16 Aligned_cols=190 Identities=23% Similarity=0.307 Sum_probs=118.9
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
.+..++|+.+.+....+ +..|++|++|++++|.+... | .|..+++|++|+|++|.+++..| +.++++|++|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 45556666666665443 45677777888887777643 3 47777788888888887776444 7777788888888
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCC
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~ 261 (955)
+|.+++ +| .|..+++|++|+|++|.+++. ..+..+++|+.|+|++|.+.+. ..+..+++|+.|+|++|.+++..
T Consensus 96 ~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~ 169 (605)
T 1m9s_A 96 ENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 169 (605)
T ss_dssp SSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCG
T ss_pred CCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCch
Confidence 877764 23 577777777777777777652 3455666666666666655543 34555555556666555555444
Q ss_pred CccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCC
Q 002186 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307 (955)
Q Consensus 262 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 307 (955)
| +..+++|+.|+|++|++++. ..+..+++|+.|+|++|++.+
T Consensus 170 ~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 170 P--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred h--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 3 55555555555555555543 234555555555555555543
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.77 E-value=5e-19 Score=191.32 Aligned_cols=188 Identities=29% Similarity=0.335 Sum_probs=98.2
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
+..+++..+.+.+..+ +..+++|++|++++|.+... | .+..+++|++|+|++|.+++..+ +.++++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 3344555555544322 34566677777777766643 3 36666677777777776665333 66666777777777
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p 262 (955)
|.+++ +| .+..+++|++|+|++|.+++. ..+..+++|+.|++++|.+++.
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-------------------------- 149 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-------------------------- 149 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--------------------------
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--------------------------
Confidence 76664 22 366666666666666666542 2344444444444444443322
Q ss_pred ccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCC
Q 002186 263 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (955)
Q Consensus 263 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (955)
..+..+++|++|++++|++++..| +..+++|+.|++++|++++. | .+..+++|+.|++++|+++
T Consensus 150 ~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 150 TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 233344444444444444443322 44444444444444444432 2 2444555555555555544
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-18 Score=186.94 Aligned_cols=170 Identities=22% Similarity=0.295 Sum_probs=144.6
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+++|+.|++++|.++.. | .+..+++|++|+|++|++++..| +..+++|++|+|++|.+++ + +.+.++++|++|+
T Consensus 45 l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCCEEE
T ss_pred cCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCCEEE
Confidence 67899999999999854 4 48899999999999999997654 9999999999999999986 3 4599999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++. ..+..+++|++|++++|.+++. ..+..+++|++|++++|.+.+..| +..+++|++|++++|.+++
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 999999864 4689999999999999999875 678889999999999998876554 7788888888888888875
Q ss_pred CCCccccCCCCCCEEEeccccccc
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAG 283 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~ 283 (955)
+| .+..+++|+.|++++|.++.
T Consensus 193 -l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 193 -LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred -Ch-hhccCCCCCEEECcCCcccC
Confidence 33 37778888888888887765
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.77 E-value=2e-18 Score=192.92 Aligned_cols=161 Identities=24% Similarity=0.187 Sum_probs=121.2
Q ss_pred CCCcEEECCCCcCcccCCcccc-CCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 101 NELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|..+++|++|||++|.+++..+..|.++++|++|+
T Consensus 39 ~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 4588899999999988888787 899999999999999988888899999999999999999877777888899999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++..|..|.++++|++|+|++|.+++..+..+.. +.++++|++|+|++|.+++
T Consensus 119 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~---------------------~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 119 LYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKD---------------------GNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC-------------------------CTTCCEEECCSSCCCC
T ss_pred CCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcC---------------------cccCCcCCEEECCCCCCCc
Confidence 9999998888888999999999999999887543333310 1334555555555555554
Q ss_pred CCCccccCCCC--CCEEEecccccc
Q 002186 260 SIPKELSNLTK--LESLFLFRNQLA 282 (955)
Q Consensus 260 ~~p~~l~~l~~--L~~L~L~~N~l~ 282 (955)
..+..+..++. ++.|+|++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 44444555554 356666666654
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.8e-18 Score=176.18 Aligned_cols=150 Identities=18% Similarity=0.228 Sum_probs=111.1
Q ss_pred EEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC
Q 002186 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (955)
Q Consensus 105 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~ 184 (955)
.+++++|.++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4677888887 4566554 689999999999998888888999999999999999988888888888899999999998
Q ss_pred CcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCC
Q 002186 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257 (955)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l 257 (955)
++...+..|.++++|++|+|++|++++..|..+..+++|++|++++|.+++..+..+..+++|++|++++|.+
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 8866666678888888888888888876666666665555555555555544444444444444444444443
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.6e-18 Score=177.40 Aligned_cols=152 Identities=14% Similarity=0.148 Sum_probs=104.0
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCC-ccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFP-GGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
+.+++++|.++. +|..+. ..+++|+|++|++++..| ..|..+++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 367888888874 666554 356788888888887755 4477888888888888888776666777788888888888
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~ 258 (955)
|.+++..|..|.++++|++|+|++|++++..|..+..+++|+.|++++|.+++..|..+..+++|++|++++|.+.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 8877776777777777777777777777666666655555555555555555444444444444444444444443
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-18 Score=193.63 Aligned_cols=175 Identities=22% Similarity=0.191 Sum_probs=134.9
Q ss_pred EECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCcccc-CCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC
Q 002186 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQ-SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (955)
Q Consensus 106 L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~ 184 (955)
+++++|.++ .+|..+. ..+++|+|++|+|++..+..|. .+++|++|+|++|++++..|..|.++++|++|+|++|.
T Consensus 23 l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 99 (361)
T 2xot_A 23 LSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNH 99 (361)
T ss_dssp EECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCc
Confidence 455556665 3565554 4589999999999988888887 89999999999999988777888899999999999999
Q ss_pred CcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCcc
Q 002186 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264 (955)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 264 (955)
+++..+..|.++++|++|+|++|.+++..|..+. ++++|++|+|++|.+++..+..
T Consensus 100 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~------------------------~l~~L~~L~L~~N~l~~l~~~~ 155 (361)
T 2xot_A 100 LHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFE------------------------DMAQLQKLYLSQNQISRFPVEL 155 (361)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTT------------------------TCTTCCEEECCSSCCCSCCGGG
T ss_pred CCcCCHHHhCCCcCCCEEECCCCcccEECHHHhC------------------------CcccCCEEECCCCcCCeeCHHH
Confidence 9877777888888888888888888765555444 4555555555666665433333
Q ss_pred c---cCCCCCCEEEeccccccccCCccCcCCCc--cCEEEccCCCCCC
Q 002186 265 L---SNLTKLESLFLFRNQLAGQVPWEFSRVTT--LKSLDLSDNRLSG 307 (955)
Q Consensus 265 l---~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~ 307 (955)
+ ..+++|+.|+|++|++++..+..+..++. ++.|+|++|.+..
T Consensus 156 ~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 156 IKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp TC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred hcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 4 57899999999999999776667777877 4889999999874
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-21 Score=229.25 Aligned_cols=203 Identities=20% Similarity=0.199 Sum_probs=111.6
Q ss_pred cCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCC-------------CCCCCchhhcCCCcceEEE-ecCCCCcc
Q 002186 122 FNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-------------FSGSVPAEISQLEHLKVLN-LAGSYFSG 187 (955)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~-------------l~~~~p~~~~~L~~L~~L~-Ls~n~l~~ 187 (955)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45667777777777765 567777777777777776553 4556666677777777776 4544322
Q ss_pred cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccC
Q 002186 188 PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSN 267 (955)
Q Consensus 188 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~ 267 (955)
+|+.+.+++|.++...+ ..|+.|++++|.+++ +|. ++++++|++|++++|.++ .+|..+++
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 22222233332221110 123444444444443 333 455555555555555555 45555555
Q ss_pred CCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCC-CcccCCCCCCcEEecccccCCCCCccc---cCCCCCc
Q 002186 268 LTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPI-PESFADLKNLRLLSLMYNEMSGTVPES---LVQLPSL 343 (955)
Q Consensus 268 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~---l~~l~~L 343 (955)
+++|++|+|++|++++ +| .+..+++|+.|+|++|++++.. |..|+.+++|+.|++++|.+++..|.. +..+++|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 5566666666665554 34 5555666666666666666554 566666666666666666665543321 2235666
Q ss_pred cEEE
Q 002186 344 EILF 347 (955)
Q Consensus 344 ~~L~ 347 (955)
+.|+
T Consensus 563 ~~L~ 566 (567)
T 1dce_A 563 SSIL 566 (567)
T ss_dssp SEEE
T ss_pred CccC
Confidence 6664
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.7e-18 Score=201.31 Aligned_cols=178 Identities=21% Similarity=0.269 Sum_probs=156.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+.+|+.|+|++|.+... | .+..+++|++|+|++|.+++..| +..+++|++|+|++|.+++ +| .+..+++|++|+
T Consensus 42 L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp HTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 67899999999999853 4 68999999999999999997655 9999999999999999986 33 799999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++. +.+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+.+..| +..+++|+.|+|++|.+++
T Consensus 116 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 116 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred ecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC
Confidence 999999863 4589999999999999999875 679999999999999999998776 8999999999999999997
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSR 291 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 291 (955)
. ..+..+++|+.|+|++|.+.+.....+..
T Consensus 190 l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~ 219 (605)
T 1m9s_A 190 L--RALAGLKNLDVLELFSQECLNKPINHQSN 219 (605)
T ss_dssp C--GGGTTCTTCSEEECCSEEEECCCCCCCSS
T ss_pred C--hHHccCCCCCEEEccCCcCcCCccccccc
Confidence 4 46899999999999999998754433333
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=173.59 Aligned_cols=151 Identities=21% Similarity=0.216 Sum_probs=116.2
Q ss_pred EEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC
Q 002186 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (955)
Q Consensus 105 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~ 184 (955)
.++.+++.++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+..|.++++|++|+|++|.
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 3566777776 5666554 899999999999999889999999999999999999987666778899999999999999
Q ss_pred CcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
+++..+..|..+++|++|+|++|+++ .+|..+..+++|++|++++|.+.+..+..+..+++|++|++++|.+..
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 99877777889999999999999887 566666666666666666666554444445555555555555555543
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-17 Score=169.65 Aligned_cols=155 Identities=20% Similarity=0.304 Sum_probs=110.6
Q ss_pred ccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCc
Q 002186 121 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLE 200 (955)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 200 (955)
...+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..|..|+.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356778888888888887 455 5778888888888888654 345778888888888888888877788888888888
Q ss_pred EEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccc
Q 002186 201 FLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ 280 (955)
Q Consensus 201 ~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~ 280 (955)
+|+|++|.+++..|..++.+++|++|++++|.+.+.+| .+.++++|++|++++|.+++ ++ .+..+++|++|++++|+
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 88888888877777777777777777777776334454 46666666666666666664 22 45566666666666665
Q ss_pred cc
Q 002186 281 LA 282 (955)
Q Consensus 281 l~ 282 (955)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 54
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.3e-19 Score=214.90 Aligned_cols=216 Identities=19% Similarity=0.199 Sum_probs=76.8
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc---------cCCccccCCCCCcEEeCCCCCCCCCCchhhcC
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG---------HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQ 171 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---------~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~ 171 (955)
+.++.|+|++|.+.. +|.. .|+.++|+.|.|.+ ..|+.|..+++|++|||++|.+. .+|..+.+
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~-----~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQA-----LLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK 245 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG
T ss_pred CccceEEeeCCCCCc-chhh-----HhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC
Confidence 457889999998875 3433 34445555554443 33555666666666666666665 45555556
Q ss_pred CCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEe
Q 002186 172 LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD 251 (955)
Q Consensus 172 L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ 251 (955)
+++|++|+|++|.++ .+|..|+++++|++|+|++|.|+ .+|..++.|++|++|+|++|.
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~------------------- 304 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNM------------------- 304 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSC-------------------
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCC-------------------
Confidence 666666666666665 55555666666666666666665 445555555555555555554
Q ss_pred ccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCc-cCEEEccCCCCCCCCCcccCCCCCCcEEecccc---
Q 002186 252 IAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTT-LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN--- 327 (955)
Q Consensus 252 Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N--- 327 (955)
++ .+|..|+++++|++|+|++|.+++.+|..+..+.. +..++|++|.+++.+|.. |+.|+++.|
T Consensus 305 -----l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~ 372 (727)
T 4b8c_D 305 -----VT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEP 372 (727)
T ss_dssp -----CC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------------------
T ss_pred -----CC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeeccccc
Confidence 43 34444455555555555555555444443332211 112455555555555543 223333333
Q ss_pred -----cCCCCCccccCCCCCccEEEccCCcCccc
Q 002186 328 -----EMSGTVPESLVQLPSLEILFIWNNYFSGS 356 (955)
Q Consensus 328 -----~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 356 (955)
.+.+..+..+..+..+....++.|.+.+.
T Consensus 373 ~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 373 QREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp -----------------------------CCCGG
T ss_pred ccccCCccccccchhhcccccceeeeeccccccc
Confidence 33334444555666777778888877543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-20 Score=222.38 Aligned_cols=204 Identities=18% Similarity=0.184 Sum_probs=152.9
Q ss_pred cCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC-------------CcccCCCCcCCCCCCcEEE-ccCCCCCC
Q 002186 146 QSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY-------------FSGPIPSQFGSFKSLEFLH-LAGNLLND 211 (955)
Q Consensus 146 ~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~ 211 (955)
..+++|+.|+|++|.++ .+|..+++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 56788889999999887 688889999999999987765 3445555555666666655 444432
Q ss_pred CCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcC
Q 002186 212 QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSR 291 (955)
Q Consensus 212 ~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 291 (955)
+.|+.+.++.|.+... |. ..|++|++++|.+++ +|. ++.+++|+.|+|++|+++ .+|..|+.
T Consensus 423 ---------~~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ---------chhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 2233344444444321 11 248889999999886 565 888899999999999988 67888888
Q ss_pred CCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCC-ccccCCCCCccEEEccCCcCcccCCcc---cCCCCCC
Q 002186 292 VTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV-PESLVQLPSLEILFIWNNYFSGSLPEN---LGRNSKL 367 (955)
Q Consensus 292 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~~---~~~~~~L 367 (955)
+++|+.|+|++|++++ +| .|+.+++|+.|+|++|++++.. |..+..+++|+.|++++|.+++.+|.. +..+++|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 9999999999999987 56 7888999999999999998876 888888999999999999988765532 2336788
Q ss_pred Ceeec
Q 002186 368 RWVDV 372 (955)
Q Consensus 368 ~~L~l 372 (955)
+.|++
T Consensus 563 ~~L~l 567 (567)
T 1dce_A 563 SSILT 567 (567)
T ss_dssp SEEEC
T ss_pred CccCC
Confidence 88764
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.4e-18 Score=181.16 Aligned_cols=134 Identities=14% Similarity=0.095 Sum_probs=104.5
Q ss_pred chhhhccCCCCCceEEEeC-CCCcE--EEEEEeecccch-------------------------HHHHHHHHHHHhccCC
Q 002186 694 TECEEAARPQSAAGCKAVL-PTGIT--VSVKKIEWGATR-------------------------IKIVSEFITRIGTVRH 745 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~~-~~g~~--vAvK~~~~~~~~-------------------------~~~~~~e~~~l~~l~H 745 (955)
.....||+|+||.||+|.. .+|+. ||||+++..... ...+.+|++.+.+++|
T Consensus 50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 129 (258)
T 1zth_A 50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE 129 (258)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence 3567899999999999997 78999 999987542111 1357889999999998
Q ss_pred CCc--eeEeEEEEcCCeeEEEEeecCC-C----ChhHHhhcCCCHHHHHHHHHHHHHHHHHHh-cCCCCCcccCCCCCCC
Q 002186 746 KNL--IRLLGFCYNRHQAYLLYDYLPN-G----NLSEKIRTKRDWAAKYKIVLGVARGLCFLH-HDCYPAIPHGDLKASN 817 (955)
Q Consensus 746 ~ni--v~l~g~~~~~~~~~lv~ey~~~-g----sL~~~l~~~~~~~~~~~i~~~ia~gl~~lH-~~~~~~iiHrdlk~~N 817 (955)
+++ ...+++ +..+|||||+.+ | +|.++... .++.....++.|+++|++||| +. +|+||||||+|
T Consensus 130 ~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlkp~N 201 (258)
T 1zth_A 130 AGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-LKELDVEGIFNDVVENVKRLYQEA---ELVHADLSEYN 201 (258)
T ss_dssp TTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCSTTS
T ss_pred CCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHH
Confidence 864 334432 356899999952 4 66665433 223456789999999999999 77 99999999999
Q ss_pred eeeCCCCCceECcccccccc
Q 002186 818 IVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 818 iLl~~~~~~ki~DfGl~~~~ 837 (955)
||++. .++|+|||++...
T Consensus 202 ILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 202 IMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp EEESS--SEEECCCTTCEET
T ss_pred EEEcC--cEEEEECcccccC
Confidence 99998 9999999998654
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.7e-18 Score=180.00 Aligned_cols=170 Identities=23% Similarity=0.298 Sum_probs=126.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+.+++.+++++|.+++.. .+..+++|++|++++|.++. +| .+..+++|++|+|++|.+++..| +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 345777888888887544 57788899999999998874 45 68888899999999998886444 88888999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++ +|.. .. ++|++|+|++|.+++. + .+..+++|+.|++++|.+++. | .+..+++|++|++++|.+++
T Consensus 92 L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 99998886 4432 23 8888888888888763 3 477777777777777777653 3 46667777777777777765
Q ss_pred CCCccccCCCCCCEEEecccccccc
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQ 284 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~ 284 (955)
. ..+..+++|+.|++++|.+++.
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEECC
T ss_pred h--HHhccCCCCCEEeCCCCcccCC
Confidence 5 5566677777777777776654
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.9e-17 Score=167.93 Aligned_cols=153 Identities=16% Similarity=0.216 Sum_probs=131.2
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..|..++.+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 678999999999998 556 6899999999999999765 345789999999999999999988888999999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++..|..|+.+++|++|++++|.+.+.+| .+..+++|++|++++|.+++ ++ .+..+++|++|++++|++.+
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 99999998888899999999999999998334556 68999999999999999886 44 68889999999999998764
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.8e-18 Score=179.92 Aligned_cols=169 Identities=17% Similarity=0.261 Sum_probs=102.9
Q ss_pred CCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEE
Q 002186 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (955)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 202 (955)
++.+++.+++++|.+++.. .+..+++|++|++++|.++. +| .+..+++|++|+|++|.+++..| |.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4667778888888887543 57788888888888888874 45 68888888888888888886544 8888888888
Q ss_pred EccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccccc
Q 002186 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (955)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 282 (955)
+|++|++++ +|.. .. ++|+.|++++|.+++. + .+.++++|++|++++|.+++. + .+..+++|++|++++|+++
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 888888875 3321 11 5555555555555432 2 244444455555544444432 1 3444444444444444444
Q ss_pred ccCCccCcCCCccCEEEccCCCCC
Q 002186 283 GQVPWEFSRVTTLKSLDLSDNRLS 306 (955)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~ 306 (955)
+. ..+..+++|+.|++++|.++
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEE
T ss_pred ch--HHhccCCCCCEEeCCCCccc
Confidence 33 23344444444444444443
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-16 Score=160.58 Aligned_cols=138 Identities=25% Similarity=0.326 Sum_probs=107.9
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCc-cccCCCCCCEEEccCCcCC
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV-EIFNLTSLISLDISRNNFS 138 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~ 138 (955)
...|.|..+.|+. +++ +.+|..+ ...|++|+|++|.|++..+. .|..+++|++|+|++|+++
T Consensus 5 ~C~C~~~~l~~s~------------~~l-~~ip~~~----~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~ 67 (192)
T 1w8a_A 5 MCHCEGTTVDCTG------------RGL-KEIPRDI----PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT 67 (192)
T ss_dssp TSEEETTEEECTT------------SCC-SSCCSCC----CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCC
T ss_pred CCEECCCEEEcCC------------CCc-CcCccCC----CCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCC
Confidence 3457777666664 233 2344433 23688899999988877664 4788888999999888888
Q ss_pred ccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc
Q 002186 139 GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214 (955)
Q Consensus 139 ~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 214 (955)
+..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+
T Consensus 68 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 68 GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 8888888888888888888888888777778888888888888888888888888888888888888888876544
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.68 E-value=2.1e-16 Score=159.43 Aligned_cols=132 Identities=17% Similarity=0.249 Sum_probs=111.6
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCc-cccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPG-GIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
+.+++++|+++ .+|..+.. +|++|+|++|++++..+. .|+.+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 57899999995 67776654 899999999999877765 488999999999999999988889999999999999999
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p 238 (955)
|.+++..|..|.++++|++|+|++|++++..|..+..+++|++|++++|.+.+..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99998888889999999999999999988878877777777777777777665443
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.65 E-value=9.6e-16 Score=152.42 Aligned_cols=138 Identities=22% Similarity=0.279 Sum_probs=111.8
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
...|+|.++.|+... +. .+|... .+.|+.|++++|++++..+..|..+++|++|+|++|++++
T Consensus 4 ~C~C~~~~l~~~~~~------------l~-~~p~~~----~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 66 (177)
T 2o6r_A 4 RCSCSGTEIRCNSKG------------LT-SVPTGI----PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS 66 (177)
T ss_dssp TCEEETTEEECCSSC------------CS-SCCTTC----CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC
T ss_pred CCEeCCCEEEecCCC------------Cc-cCCCCC----CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceE
Confidence 355899999998622 11 123222 4578999999999998777778899999999999999998
Q ss_pred cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc
Q 002186 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214 (955)
Q Consensus 140 ~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 214 (955)
..+..|..+++|++|+|++|.+++..+..+.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|
T Consensus 67 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 67 LPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred eChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 777778999999999999999997777778889999999999999987666667889999999999998887654
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.64 E-value=3.1e-16 Score=151.14 Aligned_cols=128 Identities=16% Similarity=0.168 Sum_probs=103.5
Q ss_pred CCCCcEEECCCCcCc-ccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEE
Q 002186 100 FNELVDLNLSHNSFS-GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L 178 (955)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|.+++.+|..+.++++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356888999999988 78888888899999999999988876 678888999999999999888788888888889999
Q ss_pred EecCCCCccc-CCCCcCCCCCCcEEEccCCCCCCCCc---hhccCCCCCcEEecc
Q 002186 179 NLAGSYFSGP-IPSQFGSFKSLEFLHLAGNLLNDQIP---AELGMLKTVTHMEIG 229 (955)
Q Consensus 179 ~Ls~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~l~ 229 (955)
++++|.+++. .|..++.+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 9998888863 34778888888888888888876554 456666666666654
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.63 E-value=6.3e-16 Score=152.32 Aligned_cols=132 Identities=16% Similarity=0.127 Sum_probs=100.5
Q ss_pred CCCCcEEECCCCcCc-ccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEE
Q 002186 100 FNELVDLNLSHNSFS-GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L 178 (955)
.++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..|..+++|++|+|++|.+++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 457888888888887 77888888888888888888888865 678888888888888888887777777778888888
Q ss_pred EecCCCCcccC-CCCcCCCCCCcEEEccCCCCCCCCc---hhccCCCCCcEEecccccc
Q 002186 179 NLAGSYFSGPI-PSQFGSFKSLEFLHLAGNLLNDQIP---AELGMLKTVTHMEIGYNFY 233 (955)
Q Consensus 179 ~Ls~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~l~~n~l 233 (955)
+|++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|+++.|..
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 88888887632 2677788888888888887775444 3555566666665555543
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-16 Score=175.05 Aligned_cols=262 Identities=15% Similarity=0.133 Sum_probs=155.9
Q ss_pred CCCCcEEECCCCcCcccCCccccC-CCCCCEEEccCCcCC--ccCCccccCCCCCcEEeCCCCCCCCCCchhhcC-----
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFN-LTSLISLDISRNNFS--GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQ----- 171 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~----- 171 (955)
+.+++.|+++++ +.+..-..+.. +++|++|||++|++. ...+..+ +.++.+++..|.+ .+..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhccccccc
Confidence 445777777643 11111112223 677888888887776 2211111 1133333333321 1223444
Q ss_pred ---CCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccc----cCCCCcccc--
Q 002186 172 ---LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFY----QGNIPWQLG-- 242 (955)
Q Consensus 172 ---L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l----~g~~p~~~~-- 242 (955)
+++|+.|+|.+ .++..-+.+|.++++|+.|++++|.+....+..|....++..+..+.+.. ...-+..+.
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 55555555555 45444444555555555555555555544444455444444444333110 000011111
Q ss_pred ------------------------CCCCCcEEeccCCCCCCCCCccc-cCCCCCCEEEeccccccccCCccCcCCCccCE
Q 002186 243 ------------------------NMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKS 297 (955)
Q Consensus 243 ------------------------~l~~L~~L~Ls~n~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 297 (955)
...++..+.+.++-.. .....+ ..+++|++|+|++|+++...+..|.++++|+.
T Consensus 176 ~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~ 254 (329)
T 3sb4_A 176 EPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLK 254 (329)
T ss_dssp CCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCE
T ss_pred cccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCE
Confidence 1233444444433111 000111 13788999999999998888888999999999
Q ss_pred EEccCCCCCCCCCcccCCCCCCc-EEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeec
Q 002186 298 LDLSDNRLSGPIPESFADLKNLR-LLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDV 372 (955)
Q Consensus 298 L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l 372 (955)
++|++| +....+.+|.++++|+ .+++.. +++..-+..|.++++|+.++++.|.++...+..|.++++|+.++.
T Consensus 255 l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 255 IKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 999988 7777778899999999 999988 676666788999999999999999998877788999999998763
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.6e-15 Score=150.29 Aligned_cols=110 Identities=25% Similarity=0.338 Sum_probs=91.5
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
+.|++|+|++|.|+ .+|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 56888888888887 67788888888888888888888887788888888888888888888877778888888888888
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND 211 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (955)
++|.++...+..|..+++|++|+|++|.+..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 8888887666678888888888888887753
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-15 Score=150.18 Aligned_cols=133 Identities=18% Similarity=0.184 Sum_probs=86.0
Q ss_pred CCCCCEEEccCCcCC-ccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEE
Q 002186 124 LTSLISLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (955)
Q Consensus 124 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 202 (955)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 467788888888876 66777777777777777777777754 667777777777777777776666666667777777
Q ss_pred EccCCCCCCCC-chhccCCCCCcEEecccccccCCCC---ccccCCCCCcEEeccCCCCC
Q 002186 203 HLAGNLLNDQI-PAELGMLKTVTHMEIGYNFYQGNIP---WQLGNMSEVQYLDIAGANLS 258 (955)
Q Consensus 203 ~L~~N~l~~~~-p~~l~~l~~L~~L~l~~n~l~g~~p---~~~~~l~~L~~L~Ls~n~l~ 258 (955)
+|++|.+++.. +..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777776532 2455555555555555555554333 24444555555555554443
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=5.5e-15 Score=148.88 Aligned_cols=126 Identities=23% Similarity=0.316 Sum_probs=105.1
Q ss_pred EECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCC
Q 002186 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185 (955)
Q Consensus 106 L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l 185 (955)
+++++|.++ .+|..+. ++|++|+|++|+++ .+|..|..+++|++|||++|.+++..+..|.++++|++|+|++|.+
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 455556665 4565543 68999999999998 6778999999999999999999988888899999999999999999
Q ss_pred cccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccC
Q 002186 186 SGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (955)
Q Consensus 186 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g 235 (955)
++..|..|.++++|++|+|++|.++...+..+..+++|+.|++++|.+..
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 98888889999999999999999987666667777777777777776553
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.60 E-value=9.2e-16 Score=147.79 Aligned_cols=128 Identities=19% Similarity=0.239 Sum_probs=93.6
Q ss_pred CCCCCEEEccCCcCC-ccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEE
Q 002186 124 LTSLISLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (955)
Q Consensus 124 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 202 (955)
.++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..++++++|++|+|++|.+++.+|..++.+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888888888887 77788888888888888888888765 667788888888888888877677777778888888
Q ss_pred EccCCCCCCC-CchhccCCCCCcEEecccccccCCCC---ccccCCCCCcEEecc
Q 002186 203 HLAGNLLNDQ-IPAELGMLKTVTHMEIGYNFYQGNIP---WQLGNMSEVQYLDIA 253 (955)
Q Consensus 203 ~L~~N~l~~~-~p~~l~~l~~L~~L~l~~n~l~g~~p---~~~~~l~~L~~L~Ls 253 (955)
++++|.+++. .|..++.+++|++|++++|.+++..+ ..+..+++|++||++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 8888887653 33566666666666666666665444 345556666666554
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.59 E-value=7.8e-15 Score=145.78 Aligned_cols=133 Identities=17% Similarity=0.211 Sum_probs=103.3
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
.+.+++++|+++. +|..+. ++|++|++++|++++..+..|+.+++|++|+|++|.+++..+..+.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3568888888874 554443 6889999999999877777788899999999999998876666778888999999999
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p 238 (955)
|.+++..+..|.++++|++|+|++|.+++..+..+..+++|++|++++|.+.+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 98887777778888888888888888876555555666667777666666655443
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.6e-16 Score=171.43 Aligned_cols=136 Identities=9% Similarity=0.022 Sum_probs=97.4
Q ss_pred cccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---------------hHHH--------HHHHHHHHhccCCCC
Q 002186 691 FNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------------RIKI--------VSEFITRIGTVRHKN 747 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---------------~~~~--------~~~e~~~l~~l~H~n 747 (955)
.-|.....||+|++|.||+|..++|+.||||+++.... .... ..+|...|.++.+..
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33557889999999999999999999999998753210 0111 234556666664443
Q ss_pred ceeEeEEEEcCCeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC--
Q 002186 748 LIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-- 825 (955)
Q Consensus 748 iv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~-- 825 (955)
+.-..-+... ..+|||||+++++|.++... .....++.|++.|+.|||+. +||||||||.|||++.++.
T Consensus 175 v~vp~p~~~~--~~~LVME~i~G~~L~~l~~~----~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~ 245 (397)
T 4gyi_A 175 FPVPEPIAQS--RHTIVMSLVDALPMRQVSSV----PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAE 245 (397)
T ss_dssp CSCCCEEEEE--TTEEEEECCSCEEGGGCCCC----SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSS
T ss_pred CCCCeeeecc--CceEEEEecCCccHhhhccc----HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCcc
Confidence 3211111111 23799999999888765432 22346789999999999998 9999999999999987763
Q ss_pred --------ceECcccccc
Q 002186 826 --------PHLAEFGFKY 835 (955)
Q Consensus 826 --------~ki~DfGl~~ 835 (955)
+.|+||+-+.
T Consensus 246 d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 246 DPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp CTTSEEEEEEECCCTTCE
T ss_pred cccccccceEEEEeCCcc
Confidence 7899999653
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.8e-14 Score=158.66 Aligned_cols=240 Identities=14% Similarity=0.067 Sum_probs=164.0
Q ss_pred CCCCcEEECCCCcCc--ccCCccccCCCCCCEEEccCCcCCccCCccccC--------CCCCcEEeCCCCCCCCCCchhh
Q 002186 100 FNELVDLNLSHNSFS--GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQS--------LRNLLVLDAFSNSFSGSVPAEI 169 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--------l~~L~~LdL~~N~l~~~~p~~~ 169 (955)
+++|+.|||++|++. ...+..+ +.++.+++..|.+ .+..|.+ +++|+.|+|.+ .++..-+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 678999999999987 2222222 2244555555432 2334555 77777777776 6665555667
Q ss_pred cCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCC----CCCCCchhccC--------------------------
Q 002186 170 SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNL----LNDQIPAELGM-------------------------- 219 (955)
Q Consensus 170 ~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~----l~~~~p~~l~~-------------------------- 219 (955)
.++++|+.|++++|.+....+..|.++.++..+.+..+. ....-+..+..
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 777777777777777665666667666666666554421 11111122222
Q ss_pred CCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccC-EE
Q 002186 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK-SL 298 (955)
Q Consensus 220 l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L 298 (955)
..++..+.+.++............+++|+.+++++|+++...+..|.++++|++|++.+| +....+..|.++++|+ .+
T Consensus 201 ~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp GGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred ccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 233344444333111111111123789999999999998776778999999999999998 8877788999999999 99
Q ss_pred EccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEc
Q 002186 299 DLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFI 348 (955)
Q Consensus 299 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 348 (955)
++.+ .++...+.+|.++++|+.++++.|+++..-+..|.++++|+.++.
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 9998 787777899999999999999999999777889999999999864
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.4e-16 Score=161.61 Aligned_cols=134 Identities=15% Similarity=0.191 Sum_probs=94.0
Q ss_pred CCCCcEEECCCCcCcccCCc------cccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCC
Q 002186 100 FNELVDLNLSHNSFSGQFPV------EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE 173 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~ 173 (955)
...++.++++.+.++|.+|. .|..+++|++|+|++|.+++ +| .+..+++|++|++++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34566667777777776665 77778888888888888776 55 7777788888888888777 5676777777
Q ss_pred cceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc-hhccCCCCCcEEecccccccCCCC
Q 002186 174 HLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIP 238 (955)
Q Consensus 174 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~g~~p 238 (955)
+|++|+|++|.+++ +| .++.+++|++|++++|.+++..+ ..+..+++|++|++++|.+.+.+|
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 78888888887775 34 57777777778877777764322 356666666666666666655444
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.2e-12 Score=147.36 Aligned_cols=263 Identities=8% Similarity=0.025 Sum_probs=153.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
...++.+.+.+ .++.+-+.+|.+. +|+.++|..| +..+-..+|.+. +|+.+++.. .++..-+.+|.++++|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 35566666654 4555556667764 6888888766 666666677773 688888875 56655566788888888888
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|+.|.++......|. .++|+.+.|..+ ++..-...|..+++|+.+++..| +...-...+.+ .+|+.+++ .++++.
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~ 261 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTN 261 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccE
Confidence 888877755555555 578888888744 55555566777777777777654 22112223333 55666666 333443
Q ss_pred CCCccccCCCCCCEEEecccccc-----ccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCc
Q 002186 260 SIPKELSNLTKLESLFLFRNQLA-----GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP 334 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 334 (955)
.-...|.++++|+.+++.+|.+. ...+..|.++++|+.++|. +.++.....+|.++++|+.+.+..| ++..-+
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~ 339 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINF 339 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECT
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcH
Confidence 33455666666666666655543 2334456666666666665 3354444555666666666666433 333334
Q ss_pred cccCCCCCccEEEccCCcCcccCCcccCCCC-CCCeeecCCC
Q 002186 335 ESLVQLPSLEILFIWNNYFSGSLPENLGRNS-KLRWVDVSTN 375 (955)
Q Consensus 335 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~-~L~~L~ls~N 375 (955)
..|.++ +|+.+++.+|.+....+..|..++ .++.+.+..+
T Consensus 340 ~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~ 380 (401)
T 4fdw_A 340 SAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAE 380 (401)
T ss_dssp TSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGG
T ss_pred HhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHH
Confidence 455555 566666655555443334444442 3444444443
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.48 E-value=4.9e-14 Score=139.81 Aligned_cols=104 Identities=20% Similarity=0.171 Sum_probs=44.0
Q ss_pred CCCcEEECCCCcCcccCCccccCCC-CCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLT-SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
..|+.|+|++|.++. +|. +..+. +|++|+|++|.+++. ..|+.+++|++|+|++|.+++..|..+..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 344445555554442 222 22222 444444444444433 3344444444444444444433222234444444444
Q ss_pred ecCCCCcccCCC--CcCCCCCCcEEEccCCCC
Q 002186 180 LAGSYFSGPIPS--QFGSFKSLEFLHLAGNLL 209 (955)
Q Consensus 180 Ls~n~l~~~~p~--~~~~l~~L~~L~L~~N~l 209 (955)
|++|.++ .+|. .+..+++|++|++++|.+
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i 125 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPV 125 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGG
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCC
Confidence 4444443 2232 344444444444444444
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.47 E-value=8e-14 Score=138.28 Aligned_cols=134 Identities=18% Similarity=0.123 Sum_probs=110.8
Q ss_pred ccccCCCCCCEEEccCCcCCccCCccccCC-CCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCC
Q 002186 119 VEIFNLTSLISLDISRNNFSGHFPGGIQSL-RNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFK 197 (955)
Q Consensus 119 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~ 197 (955)
..+.++++|++|++++|+++. +|. +..+ ++|++|||++|.+++. ..+..+++|++|+|++|.+++..|..|+.++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 356788999999999999985 454 4444 4999999999999875 6788999999999999999876555568999
Q ss_pred CCcEEEccCCCCCCCCch--hccCCCCCcEEecccccccCCCCcc----ccCCCCCcEEeccCCCCC
Q 002186 198 SLEFLHLAGNLLNDQIPA--ELGMLKTVTHMEIGYNFYQGNIPWQ----LGNMSEVQYLDIAGANLS 258 (955)
Q Consensus 198 ~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~l~~n~l~g~~p~~----~~~l~~L~~L~Ls~n~l~ 258 (955)
+|++|+|++|.++ .+|. .+..+++|+.|++++|.+.. +|.. +..+++|++||+++|...
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999999999995 4665 78899999999999999874 5553 888999999999988754
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.46 E-value=2.7e-13 Score=133.50 Aligned_cols=104 Identities=23% Similarity=0.254 Sum_probs=66.2
Q ss_pred EECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCC
Q 002186 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185 (955)
Q Consensus 106 L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l 185 (955)
+++++|.++. +|..+. ++|++|+|++|+|++..|..|..+++|++|||++|++++..+..|.++++|++|+|++|.+
T Consensus 14 l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 14 VDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp EECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 4444444442 444332 5666666666666666666666666666666666666655555566677777777777777
Q ss_pred cccCCCCcCCCCCCcEEEccCCCCCCC
Q 002186 186 SGPIPSQFGSFKSLEFLHLAGNLLNDQ 212 (955)
Q Consensus 186 ~~~~p~~~~~l~~L~~L~L~~N~l~~~ 212 (955)
++..+..|.++++|++|+|++|.++..
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 665555677777777777777776543
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.46 E-value=3e-16 Score=159.18 Aligned_cols=150 Identities=21% Similarity=0.312 Sum_probs=91.9
Q ss_pred ccCCCCCCEEEccCCcCCccCCc------cccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcC
Q 002186 121 IFNLTSLISLDISRNNFSGHFPG------GIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFG 194 (955)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~ 194 (955)
+.....++.++++.+.++|.+|. .|..+++|++|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45566777778888877777765 66677777777777777665 55 6666677777777777666 4555555
Q ss_pred CCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCC-ccccCCCCCCE
Q 002186 195 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP-KELSNLTKLES 273 (955)
Q Consensus 195 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p-~~l~~l~~L~~ 273 (955)
.+++|++|+|++|.+++ +| .+..+ ++|++|++++|.+++..+ ..+..+++|++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l------------------------~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~ 144 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKL------------------------VNLRVLYMSNNKITNWGEIDKLAALDKLED 144 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHH------------------------HHSSEEEESEEECCCHHHHHHHTTTTTCSE
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccC------------------------CCCCEEECCCCcCCchhHHHHHhcCCCCCE
Confidence 56666666666666654 23 34444 445555555555543211 24555666666
Q ss_pred EEeccccccccCCcc----------CcCCCccCEEE
Q 002186 274 LFLFRNQLAGQVPWE----------FSRVTTLKSLD 299 (955)
Q Consensus 274 L~L~~N~l~~~~p~~----------~~~l~~L~~L~ 299 (955)
|++++|.+.+..|.. +..+++|+.||
T Consensus 145 L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 145 LLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp EEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC
T ss_pred EEecCCccccccccccchHHHHHHHHHhCCCcEEEC
Confidence 666666665554432 55566666665
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.44 E-value=2.6e-12 Score=144.55 Aligned_cols=243 Identities=9% Similarity=0.047 Sum_probs=198.7
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
..|+.++|..| ++.+-..+|.+ .+|+.+++.. .+..+-+.+|.++++|+.++|+.|.++......|. ..+|+.+.|
T Consensus 135 ~~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~l 210 (401)
T 4fdw_A 135 SQIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLL 210 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEEC
T ss_pred CCccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEe
Confidence 47999999876 77677778888 4799999986 67777788999999999999999999865555666 689999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCC--
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS-- 258 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~-- 258 (955)
..+ ++..-...|.++++|+.+++..| ++..-...|.. .+|+.+.+.. .+...-+..+.++++|+.+++.+|.+.
T Consensus 211 p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~-~i~~I~~~aF~~c~~L~~l~l~~~~~~~~ 286 (401)
T 4fdw_A 211 PVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPN-GVTNIASRAFYYCPELAEVTTYGSTFNDD 286 (401)
T ss_dssp CTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEET-TCCEECTTTTTTCTTCCEEEEESSCCCCC
T ss_pred CCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCC-CccEEChhHhhCCCCCCEEEeCCccccCC
Confidence 854 77667788999999999999875 55555556766 8899999954 444444667889999999999988765
Q ss_pred ---CCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCcc
Q 002186 259 ---GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 335 (955)
Q Consensus 259 ---~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 335 (955)
...+..|.++++|+.+.+. +.++..-...|.++++|+.++|..| ++..-+.+|.++ +|+.++++.|.+....+.
T Consensus 287 ~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~ 363 (401)
T 4fdw_A 287 PEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEK 363 (401)
T ss_dssp TTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCS
T ss_pred cccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccc
Confidence 3445678999999999999 5587777889999999999999665 766677899999 999999999998877777
Q ss_pred ccCCCC-CccEEEccCCcCc
Q 002186 336 SLVQLP-SLEILFIWNNYFS 354 (955)
Q Consensus 336 ~l~~l~-~L~~L~L~~N~l~ 354 (955)
.|..++ +++.|++..+.+.
T Consensus 364 ~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 364 VWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SCCCSCTTCCEEEECGGGHH
T ss_pred cccCCCCCccEEEeCHHHHH
Confidence 788875 7889998876543
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.44 E-value=4.7e-13 Score=132.18 Aligned_cols=104 Identities=23% Similarity=0.222 Sum_probs=74.5
Q ss_pred EEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC
Q 002186 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (955)
Q Consensus 105 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~ 184 (955)
.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|+.+++|++|+|++|++++..+..|.++++|++|+|++|.
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4566666664 4555553 677777777777777777777777777777777777776555556777778888888887
Q ss_pred CcccCCCCcCCCCCCcEEEccCCCCCC
Q 002186 185 FSGPIPSQFGSFKSLEFLHLAGNLLND 211 (955)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (955)
+++..+..|..+++|++|+|++|.+..
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred cceeCHHHhccccCCCEEEeCCCCccc
Confidence 776555567778888888888887764
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.38 E-value=1.9e-12 Score=127.41 Aligned_cols=107 Identities=22% Similarity=0.280 Sum_probs=83.8
Q ss_pred CCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccC
Q 002186 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 206 (955)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 206 (955)
.+++++++|.++. +|..+ .++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4688899988875 56555 37888888888888887788888888888888888888877777788888888888888
Q ss_pred CCCCCCCchhccCCCCCcEEecccccccCC
Q 002186 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQGN 236 (955)
Q Consensus 207 N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~ 236 (955)
|++++..+..+..+++|++|++++|.+...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 888876666677777777777777666543
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.8e-12 Score=125.67 Aligned_cols=104 Identities=19% Similarity=0.235 Sum_probs=80.5
Q ss_pred CEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCC
Q 002186 128 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGN 207 (955)
Q Consensus 128 ~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N 207 (955)
+.+++++|.+. .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67888888885 5666554 78888888888888877888888888888888888888766666788888888888888
Q ss_pred CCCCCCchhccCCCCCcEEeccccccc
Q 002186 208 LLNDQIPAELGMLKTVTHMEIGYNFYQ 234 (955)
Q Consensus 208 ~l~~~~p~~l~~l~~L~~L~l~~n~l~ 234 (955)
++++..+..+..+++|++|++++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 887655555666666666666666554
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.25 E-value=2e-11 Score=135.26 Aligned_cols=93 Identities=18% Similarity=0.133 Sum_probs=59.9
Q ss_pred CCccccCCCCCCEEEccC-CcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCC
Q 002186 117 FPVEIFNLTSLISLDISR-NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGS 195 (955)
Q Consensus 117 ~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~ 195 (955)
+|. +..+++|++|+|++ |.|++..|..|+.|++|++|||++|+|++..|..|.+|++|++|+|++|.|++..+..|..
T Consensus 24 ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 102 (347)
T 2ifg_A 24 LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG 102 (347)
T ss_dssp TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS
T ss_pred cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHccc
Confidence 444 55666666666664 6666666666666666666666666666666666666666667777777666554555555
Q ss_pred CCCCcEEEccCCCCCC
Q 002186 196 FKSLEFLHLAGNLLND 211 (955)
Q Consensus 196 l~~L~~L~L~~N~l~~ 211 (955)
++ |++|+|.+|.+..
T Consensus 103 ~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 103 LS-LQELVLSGNPLHC 117 (347)
T ss_dssp CC-CCEEECCSSCCCC
T ss_pred CC-ceEEEeeCCCccC
Confidence 54 7777777777654
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.25 E-value=5e-10 Score=126.23 Aligned_cols=323 Identities=10% Similarity=0.077 Sum_probs=161.3
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
..+|+.++|.. .++.+-..+|.++++|+.++|..+ +..+-..+|.++.+|+.+.+..+ +...-..+|.++..++...
T Consensus 70 c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~ 146 (394)
T 4fs7_A 70 CRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITI 146 (394)
T ss_dssp CTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEEC
T ss_pred CCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccccccccc
Confidence 34566777753 355455566777777777777644 44444556666777766665433 3323334455554433333
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
.... ...-...|.++++|+.+.+.++. ...-...|..+.+|+.+.+..+ +...-...+.++..|+.+.+..+...
T Consensus 147 ~~~~--~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~- 221 (394)
T 4fs7_A 147 PEGV--TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY- 221 (394)
T ss_dssp CTTC--CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE-
T ss_pred Cccc--cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE-
Confidence 2222 22223456677777777765442 2233344555566666655443 11112233444455554444333221
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
+.+.....++|+.+.+..+ ++..-...|..+..|+.+.+..+... .....|..+..++.+....+.+. ...+..
T Consensus 222 -i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~ 295 (394)
T 4fs7_A 222 -LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYG 295 (394)
T ss_dssp -ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTT
T ss_pred -eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccc
Confidence 1122223345555555422 22223334555555555555544332 33344555555555554433221 123444
Q ss_pred CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+.+|+.+.+..+ ++..-...|.++.+|+.+++.+ + ++..-..+|.+|++|+.++
T Consensus 296 ~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~------------------------~-v~~I~~~aF~~c~~L~~i~ 349 (394)
T 4fs7_A 296 CSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPY------------------------L-VEEIGKRSFRGCTSLSNIN 349 (394)
T ss_dssp CTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCT------------------------T-CCEECTTTTTTCTTCCEEC
T ss_pred cccccccccccc-cceechhhhcCCCCCCEEEeCC------------------------c-ccEEhHHhccCCCCCCEEE
Confidence 555555555432 3322233444445555544432 2 3323345677788888888
Q ss_pred CcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcc
Q 002186 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEY 465 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~ 465 (955)
+..| ++..-..+|.++++|+.+++..+ +. .+...|.++++|+.
T Consensus 350 lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 350 FPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp CCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred ECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 8766 55455567888888888887654 22 23445666666654
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.8e-10 Score=130.00 Aligned_cols=334 Identities=11% Similarity=0.013 Sum_probs=189.3
Q ss_pred CcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCC
Q 002186 113 FSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ 192 (955)
Q Consensus 113 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~ 192 (955)
++.+-..+|.++++|+.+.|..+ ++.+-..+|.++++|+.+++..+ ++..-..+|.++.+|+.+.+..+ +...-...
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 34445567888888999988744 66666677888888888888754 55444566777888887766543 33344455
Q ss_pred cCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCC
Q 002186 193 FGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLE 272 (955)
Q Consensus 193 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~ 272 (955)
|.++..++....... ...-...|..+++|+.+.+..+. ...-...|.++++|+
T Consensus 136 F~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~-------------------------~~I~~~~F~~c~~L~ 188 (394)
T 4fs7_A 136 FKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSM-------------------------ETLHNGLFSGCGKLK 188 (394)
T ss_dssp TTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTC-------------------------CEECTTTTTTCTTCC
T ss_pred eecccccccccCccc--cccchhhhcccCCCcEEecCCcc-------------------------ceeccccccCCCCce
Confidence 666554443333222 11222344555555555554321 111222344445555
Q ss_pred EEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCc
Q 002186 273 SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNY 352 (955)
Q Consensus 273 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 352 (955)
.+.+..| ++......|.++..|+.+.+..+... +.+.+....+|+.+.+..+ ++..-...+..+..|+.+.+..+.
T Consensus 189 ~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~ 264 (394)
T 4fs7_A 189 SIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNK 264 (394)
T ss_dssp BCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTT
T ss_pred EEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCc
Confidence 5555433 33333344555555555554443322 1222233344555554322 111122344455555555555443
Q ss_pred CcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchh
Q 002186 353 FSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLK 432 (955)
Q Consensus 353 l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 432 (955)
.. .....+..+..++.+....+.+. ...+.....|+.+.+..+ +...-...|.+|++|+.++|.++ ++..-..+
T Consensus 265 ~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 338 (394)
T 4fs7_A 265 LR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRS 338 (394)
T ss_dssp CE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred ce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHh
Confidence 22 33344555555665555544321 112334455666665443 44344567889999999999755 66555678
Q ss_pred ccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCcccc
Q 002186 433 FSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQN 490 (955)
Q Consensus 433 ~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~ 490 (955)
|.++.+|+.+++..| ++..-...|.++.+|+.+++..+-. .+...+..+++|+.
T Consensus 339 F~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~~~---~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 339 FRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKRLE---QYRYDFEDTTKFKW 392 (394)
T ss_dssp TTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGGGG---GGGGGBCTTCEEEE
T ss_pred ccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCCCE---EhhheecCCCCCcE
Confidence 999999999999877 6644456799999999999987622 22345666666654
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.23 E-value=2e-11 Score=135.39 Aligned_cols=110 Identities=18% Similarity=0.211 Sum_probs=91.2
Q ss_pred CccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCC-CcCcccCCccccCCCCCCEEEccCCcCCcc
Q 002186 62 ACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSH-NSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (955)
Q Consensus 62 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (955)
.|.|..|.|+..+ ++.+ +|. +.. +.+|+.|+|++ |.|++..|..|.+|++|++|+|++|+|++.
T Consensus 7 ~C~~~~v~~~~~n-----------~l~~-ip~-l~~--~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 71 (347)
T 2ifg_A 7 PHGSSGLRCTRDG-----------ALDS-LHH-LPG--AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFV 71 (347)
T ss_dssp CSSSSCEECCSSC-----------CCTT-TTT-SCS--CSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEE
T ss_pred cccCCEEEcCCCC-----------CCCc-cCC-CCC--CCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCcccee
Confidence 3888888887521 2332 565 544 77899999996 999988888999999999999999999999
Q ss_pred CCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcc
Q 002186 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG 187 (955)
Q Consensus 141 ~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~ 187 (955)
.|..|.+|++|++|||++|+|++..+..+..+. |++|+|++|.+..
T Consensus 72 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 72 APDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 999999999999999999999976666666666 9999999998874
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.4e-12 Score=145.35 Aligned_cols=164 Identities=16% Similarity=0.142 Sum_probs=86.1
Q ss_pred CCCCcEEECCCCcCcccCCccccC-----CCCCCEEEccCCcCCccCCccc-cCCCCCcEEeCCCCCCCCCCchhh----
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFN-----LTSLISLDISRNNFSGHFPGGI-QSLRNLLVLDAFSNSFSGSVPAEI---- 169 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~LdL~~N~l~~~~p~~~---- 169 (955)
.+.|+.|+|++|.++......+.. .++|++|||++|.++......+ ..+++|++|||++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 356777777777776543333322 2567777777777654322222 234566667777766654333332
Q ss_pred -cCCCcceEEEecCCCCcc----cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCC
Q 002186 170 -SQLEHLKVLNLAGSYFSG----PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNM 244 (955)
Q Consensus 170 -~~L~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l 244 (955)
...++|++|+|++|.++. .++..+..+++|++|+|++|.+++.-.. .++..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~--------------------~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE--------------------LLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH--------------------HHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH--------------------HHHHHHhcC
Confidence 234566666666666643 1233344556666666666665431100 112233444
Q ss_pred CCCcEEeccCCCCCCC----CCccccCCCCCCEEEeccccccc
Q 002186 245 SEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLAG 283 (955)
Q Consensus 245 ~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~ 283 (955)
++|++|+|++|.++.. +...+...++|++|+|++|.++.
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 5555666666655431 22233345666667776666654
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.11 E-value=2e-12 Score=143.95 Aligned_cols=170 Identities=16% Similarity=0.084 Sum_probs=104.9
Q ss_pred CCCCCEEEccCCcCCccCCccccC-----CCCCcEEeCCCCCCCCCCchhh-cCCCcceEEEecCCCCcccCCCCc----
Q 002186 124 LTSLISLDISRNNFSGHFPGGIQS-----LRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQF---- 193 (955)
Q Consensus 124 l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~LdL~~N~l~~~~p~~~-~~L~~L~~L~Ls~n~l~~~~p~~~---- 193 (955)
+++|++|+|++|.++......+.. .++|++|||++|.++......+ ..+++|++|+|++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 457788888888876543333322 2577777777777654322222 234567777777776654332222
Q ss_pred -CCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC----CCCccccCC
Q 002186 194 -GSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG----SIPKELSNL 268 (955)
Q Consensus 194 -~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~----~~p~~l~~l 268 (955)
...++|++|+|++|.++..-.. .++..+..+++|++|+|++|.++. .++..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~--------------------~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVA--------------------VLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHH--------------------HHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHH--------------------HHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcC
Confidence 2345666666666665421111 123334556677777777777653 234556778
Q ss_pred CCCCEEEeccccccccC----CccCcCCCccCEEEccCCCCCCCCCccc
Q 002186 269 TKLESLFLFRNQLAGQV----PWEFSRVTTLKSLDLSDNRLSGPIPESF 313 (955)
Q Consensus 269 ~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 313 (955)
++|++|+|++|.++..- +..+...++|++|+|++|.|+......+
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 89999999999997532 2334567899999999999975443333
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=3.4e-10 Score=119.99 Aligned_cols=137 Identities=17% Similarity=0.056 Sum_probs=106.2
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeeccc-chHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
.....+.|+.+.||++... |..+++|...... .....+.+|++.++.+. |..+.++++++.+.+..|+||||++|.+
T Consensus 18 ~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~ 96 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVL 96 (263)
T ss_dssp EEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEE
T ss_pred eEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCee
Confidence 4556777888899999864 6789999986422 22345778888888874 6778889999998889999999999999
Q ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------------------
Q 002186 773 LSEKIRTKRDWAAKYKIVLGVARGLCFLHHDC------------------------------------------------ 804 (955)
Q Consensus 773 L~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~------------------------------------------------ 804 (955)
|.+.+... .....++.+++++++.||+..
T Consensus 97 l~~~~~~~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (263)
T 3tm0_A 97 CSEEYEDE---QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDF 173 (263)
T ss_dssp HHHHCCTT---TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHH
T ss_pred hhhccCCc---ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHH
Confidence 98764221 234578889999999999810
Q ss_pred --------CCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 805 --------YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 805 --------~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
.+.++|+|+++.||+++++..+.|.||+.+.
T Consensus 174 l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 174 LKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876556799999763
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.03 E-value=4.1e-10 Score=119.12 Aligned_cols=128 Identities=16% Similarity=0.102 Sum_probs=97.4
Q ss_pred cCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCc--eeEeEEEEcCCeeEEEEeecCCCChhHHh
Q 002186 700 ARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL--IRLLGFCYNRHQAYLLYDYLPNGNLSEKI 777 (955)
Q Consensus 700 g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~ni--v~l~g~~~~~~~~~lv~ey~~~gsL~~~l 777 (955)
+.|..+.||++...+|..++||..... ....+.+|++.++.+++.++ .+++++....+..++||||++|.++. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 355568999999888889999997643 22456778888888865554 45888888878899999999998884 2
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------------------
Q 002186 778 RTKRDWAAKYKIVLGVARGLCFLHHDC----------------------------------------------------- 804 (955)
Q Consensus 778 ~~~~~~~~~~~i~~~ia~gl~~lH~~~----------------------------------------------------- 804 (955)
. ..+ +..++.++++.++.||+..
T Consensus 105 ~-~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 180 (264)
T 1nd4_A 105 S-HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPD 180 (264)
T ss_dssp S-CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCS
T ss_pred C-cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCC
Confidence 2 122 2367788888888888742
Q ss_pred --CCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 805 --YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 805 --~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
.+.++|+|++|.||+++++..++|.|||.+.
T Consensus 181 ~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 181 GEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp SCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999877667799999864
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.91 E-value=2.7e-09 Score=118.67 Aligned_cols=141 Identities=15% Similarity=0.214 Sum_probs=106.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEee--ccc--chHHHHHHHHHHHhccC--CCCceeEeEEEEcC---CeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIE--WGA--TRIKIVSEFITRIGTVR--HKNLIRLLGFCYNR---HQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~--~~~--~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~---~~~~lv~ 765 (955)
..+.++.|.++.||+....+ ..+++|+.. .+. .....+.+|+++++.++ +..+.++++++.+. +..|+||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 45567899999999998765 567888775 332 22446778899988887 45678899998776 4589999
Q ss_pred eecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------
Q 002186 766 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDC----------------------------------------- 804 (955)
Q Consensus 766 ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~----------------------------------------- 804 (955)
||++|..+.+......+..++..++.++++.|+.||+..
T Consensus 121 e~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (359)
T 3dxp_A 121 EFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSL 200 (359)
T ss_dssp ECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHH
T ss_pred EecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHH
Confidence 999998886544445677888899999999999999731
Q ss_pred --------------CCCcccCCCCCCCeeeCCCCC--ceECccccccc
Q 002186 805 --------------YPAIPHGDLKASNIVFDENME--PHLAEFGFKYL 836 (955)
Q Consensus 805 --------------~~~iiHrdlk~~NiLl~~~~~--~ki~DfGl~~~ 836 (955)
.+.++|+|+++.||+++.++. +.|.||+.+..
T Consensus 201 ~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 201 MDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999997753 68999998753
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.6e-07 Score=105.68 Aligned_cols=124 Identities=13% Similarity=0.115 Sum_probs=81.2
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCc---CCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEE
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN---FSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L 178 (955)
.|+.+.+..+ ++.+-..+|.++++|+.+.++.|. ++.+-..+|..+.+|+.+.+..+ ++......|..+.+|+.+
T Consensus 65 ~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 65 VLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred cCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 4777777654 665667788888888888887764 55455667888888888776544 443445567788888888
Q ss_pred EecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEeccc
Q 002186 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGY 230 (955)
Q Consensus 179 ~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~ 230 (955)
.+..+ +.......|.++.+|+.+.+..+ ++..-...|. -..|+.+.+..
T Consensus 143 ~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~ 191 (394)
T 4gt6_A 143 TIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPA 191 (394)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECT
T ss_pred cccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECC
Confidence 88644 34344566778888888888654 3322222332 24566665543
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.86 E-value=1.4e-11 Score=128.81 Aligned_cols=142 Identities=20% Similarity=0.216 Sum_probs=75.8
Q ss_pred CCccccceeecCCCCcEEEEEcCC---CCCCccCCCCcc-h-------hcCCCCcEEECCCCcCcccCCccccCCCCCCE
Q 002186 61 YACSWSGVKCNKNNTIVVGINLSM---KGLSGALPGKPL-R-------IFFNELVDLNLSHNSFSGQFPVEIFNLTSLIS 129 (955)
Q Consensus 61 ~~c~w~gv~C~~~~~~v~~l~l~~---~~l~g~~~~~~~-~-------~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (955)
..|+|.|+.|+..+.+|+.+-..+ ..+.|.+.+... . -+-..-+.|||+. |...+.|+.
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~----------l~~dp~L~~ 145 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKG----------LRSDPDLVA 145 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTT----------GGGCHHHHH
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHH----------cCCCcchhh
Confidence 358999999997655654433322 223344443211 0 0011233444432 333344444
Q ss_pred --EEccCCcCC---ccCCccccCCCCCcEEeCCCCCCCC--CCchhhcCCCcceEEEecCCCCcccCCCCcCCCC--CCc
Q 002186 130 --LDISRNNFS---GHFPGGIQSLRNLLVLDAFSNSFSG--SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFK--SLE 200 (955)
Q Consensus 130 --L~Ls~N~l~---~~~p~~~~~l~~L~~LdL~~N~l~~--~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~--~L~ 200 (955)
++++.|... +.++....++++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++. ..+..++ +|+
T Consensus 146 ~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~ 223 (267)
T 3rw6_A 146 QNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLE 223 (267)
T ss_dssp TTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCS
T ss_pred cCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcc
Confidence 555666322 2122222456677777777777776 3445666777777777777777654 2233333 677
Q ss_pred EEEccCCCCCCCCc
Q 002186 201 FLHLAGNLLNDQIP 214 (955)
Q Consensus 201 ~L~L~~N~l~~~~p 214 (955)
+|+|++|.+.+.+|
T Consensus 224 ~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 224 ELWLDGNSLCDTFR 237 (267)
T ss_dssp EEECTTSTTGGGCS
T ss_pred eEEccCCcCccccC
Confidence 77777777765544
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.6e-07 Score=105.54 Aligned_cols=77 Identities=14% Similarity=0.186 Sum_probs=34.6
Q ss_pred CcEEeccCCCCCCCCCccccCCCCCCEEEecccc---ccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEe
Q 002186 247 VQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ---LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323 (955)
Q Consensus 247 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 323 (955)
|+.+.+..+ ++..-...|.++++|+.+.+..|. ++..-..+|..+.+|+.+.+..+ ++......|..+.+|+.+.
T Consensus 66 L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 555555322 332333445555555555555442 33333344555555555444432 2223333445555555555
Q ss_pred cc
Q 002186 324 LM 325 (955)
Q Consensus 324 Ls 325 (955)
+.
T Consensus 144 lp 145 (394)
T 4gt6_A 144 IP 145 (394)
T ss_dssp CC
T ss_pred cc
Confidence 43
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.8e-09 Score=118.94 Aligned_cols=202 Identities=17% Similarity=0.211 Sum_probs=103.6
Q ss_pred CcEEEEEcCCCCCCc-cC-------CCCcchhcCCCCcEEECCCCcCc---------ccCCccccCCCCCCEEEccCCcC
Q 002186 75 TIVVGINLSMKGLSG-AL-------PGKPLRIFFNELVDLNLSHNSFS---------GQFPVEIFNLTSLISLDISRNNF 137 (955)
Q Consensus 75 ~~v~~l~l~~~~l~g-~~-------~~~~~~~~l~~L~~L~Ls~n~l~---------~~~p~~~~~l~~L~~L~Ls~N~l 137 (955)
.+|+.+.+...+..| .. ..+..+ +++|+.|.+..+... +.++..+..+++|+.|+|++|.-
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~--l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~ 184 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEK--FAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNN 184 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHH--HTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBT
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhh--cchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCC
Confidence 356677776655553 11 122223 678888888655331 12334456677888888877631
Q ss_pred CccCCccccCCCCCcEEeCCCCCCCCCCchhhc--CCCcceEEEecC--CCCccc-----CCCCc--CCCCCCcEEEccC
Q 002186 138 SGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEIS--QLEHLKVLNLAG--SYFSGP-----IPSQF--GSFKSLEFLHLAG 206 (955)
Q Consensus 138 ~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~--~L~~L~~L~Ls~--n~l~~~-----~p~~~--~~l~~L~~L~L~~ 206 (955)
. .++. +. +++|++|+|..+.++......+. .+++|++|+|+. |...+. +...+ ..+++|++|+|.+
T Consensus 185 l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~ 261 (362)
T 2ra8_A 185 L-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVD 261 (362)
T ss_dssp C-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEES
T ss_pred c-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCC
Confidence 1 2232 33 67778887777766543333333 677777777753 111111 01111 2356666666666
Q ss_pred CCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCC----CCccccCCCCCCEEEecccccc
Q 002186 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLA 282 (955)
Q Consensus 207 N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~ 282 (955)
|.+.+..+..+.. ...+++|++|+|+.|.+.+. ++..+.++++|+.|+|+.|.++
T Consensus 262 ~~i~~~~~~~la~---------------------a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 262 AEEQNVVVEMFLE---------------------SDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CTTHHHHHHHHHH---------------------CSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCchHHHHHHHh---------------------CccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 6554322222210 01345666666666655532 2223344567777777777665
Q ss_pred ccCCccCcC-CCccCEEEccCCC
Q 002186 283 GQVPWEFSR-VTTLKSLDLSDNR 304 (955)
Q Consensus 283 ~~~p~~~~~-l~~L~~L~Ls~N~ 304 (955)
...-..+.. + ...++++.++
T Consensus 321 d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 321 DEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHHHHHc--CCEEEecCCc
Confidence 332212221 1 2456777665
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.67 E-value=3.9e-09 Score=116.32 Aligned_cols=164 Identities=15% Similarity=0.193 Sum_probs=86.1
Q ss_pred CchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhcc--CCCCCcEEeccc--ccccCCCCcc
Q 002186 165 VPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG--MLKTVTHMEIGY--NFYQGNIPWQ 240 (955)
Q Consensus 165 ~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~l~~--n~l~g~~p~~ 240 (955)
++..+..+++|+.|+|++|.-. .++. +. +++|++|+|..+.++......+. .+++|++|+|+. |...+...
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~-- 238 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGD-- 238 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSC--
T ss_pred HHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchh--
Confidence 4455667778888888776311 2233 32 67788888877766443323333 566666666642 11111100
Q ss_pred ccCCCCCcEEeccCCCCCCCCCccc--cCCCCCCEEEeccccccccCCccC---cCCCccCEEEccCCCCCCC----CCc
Q 002186 241 LGNMSEVQYLDIAGANLSGSIPKEL--SNLTKLESLFLFRNQLAGQVPWEF---SRVTTLKSLDLSDNRLSGP----IPE 311 (955)
Q Consensus 241 ~~~l~~L~~L~Ls~n~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~----~p~ 311 (955)
+ .. +...+ ..+++|++|+|.+|.+.+..+..+ ..+++|++|+|+.|.+++. ++.
T Consensus 239 ~---~~--------------l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~ 301 (362)
T 2ra8_A 239 M---NV--------------FRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLD 301 (362)
T ss_dssp G---GG--------------TGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHT
T ss_pred H---HH--------------HHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHh
Confidence 0 00 00011 235667777777666654322111 2456777777777777653 233
Q ss_pred ccCCCCCCcEEecccccCCCCCccccCC-CCCccEEEccCCc
Q 002186 312 SFADLKNLRLLSLMYNEMSGTVPESLVQ-LPSLEILFIWNNY 352 (955)
Q Consensus 312 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~L~~L~L~~N~ 352 (955)
.+..+++|+.|++++|.++...-..+.. + ...++++.++
T Consensus 302 ~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 302 HVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp THHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred hcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 3345677888888777765332222221 1 2446777665
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.65 E-value=1.2e-08 Score=110.48 Aligned_cols=187 Identities=13% Similarity=0.085 Sum_probs=120.0
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccC-CCC--ceeEeEEEEcCC---eeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKN--LIRLLGFCYNRH---QAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~g~~~~~~---~~~lv~ey~ 768 (955)
..+.++.|....||+.. ..+++|+-... .....+.+|.+.++.+. |.. +.+.++++...+ ..|+||||+
T Consensus 24 ~i~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 24 TIEISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCCEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eeEecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 34557889999999864 45888875422 23456788899988774 333 334554443333 358999999
Q ss_pred CCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcC---------------------------------------------
Q 002186 769 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHD--------------------------------------------- 803 (955)
Q Consensus 769 ~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~--------------------------------------------- 803 (955)
+|.++.+.....++..++..++.++++.++.||+.
T Consensus 99 ~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (304)
T 3sg8_A 99 KGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYR 178 (304)
T ss_dssp CCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred CCeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHH
Confidence 99888765555667777888888888888888861
Q ss_pred ----------CCCCcccCCCCCCCeeeCC--CCCceECcccccccccccCC--CCcccccccCch------hhhhc----
Q 002186 804 ----------CYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQLADG--SFPAKIAWTESG------EFYNA---- 859 (955)
Q Consensus 804 ----------~~~~iiHrdlk~~NiLl~~--~~~~ki~DfGl~~~~~~~~~--~~~~~~~~~~~~------e~~~~---- 859 (955)
..+.++|+|+++.||+++. ...+.|.||+.+..-..... ........+... +.|..
T Consensus 179 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~ 258 (304)
T 3sg8_A 179 DILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIP 258 (304)
T ss_dssp HHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHH
T ss_pred HHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcH
Confidence 1145799999999999998 45678999998754321100 000000000000 01100
Q ss_pred ---cCCcccccchhHHHHHHHHHhCCCCCC
Q 002186 860 ---MKEEMYMDVYGFGEIILEILTNGRLTN 886 (955)
Q Consensus 860 ---~~~~~~~DV~S~Gvvl~Elltg~~p~~ 886 (955)
.+.....+.|++|+++|++.+|..++.
T Consensus 259 ~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 259 TVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 011222589999999999999976543
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=98.45 E-value=2.1e-05 Score=87.76 Aligned_cols=299 Identities=9% Similarity=0.030 Sum_probs=137.7
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
.+|+.+.+.. .++.+-..+|.++++|+.++|..+ ++.+-..+|.+. +|+.+.+..+ ++..-..+|.. .+|+.+.+
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~l 120 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEF 120 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEEC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccC
Confidence 3566666653 355555667888888888888644 555555667766 5666665433 33233334444 36777777
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccC------------CCCccccCCCCCc
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG------------NIPWQLGNMSEVQ 248 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g------------~~p~~~~~l~~L~ 248 (955)
..+ ++..-...|.+. +|+...+..+ ++..-...+....+++...+..+.... .....+.....+.
T Consensus 121 p~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (379)
T 4h09_A 121 PGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGT 197 (379)
T ss_dssp CTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCS
T ss_pred CCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccc
Confidence 654 222223334443 4555554432 332333445555555555544332110 0001111122222
Q ss_pred EEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEeccccc
Q 002186 249 YLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNE 328 (955)
Q Consensus 249 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 328 (955)
...+.... .......+....+|+.+.+..+ +.......|.++..|+.+.+..+ ++......|.++.+|+.+.+..+
T Consensus 198 ~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~- 273 (379)
T 4h09_A 198 EFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK- 273 (379)
T ss_dssp EEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-
T ss_pred ccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-
Confidence 22221111 1111222333444555444322 22233334445555555555443 33333344455555555554322
Q ss_pred CCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcC
Q 002186 329 MSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPS 408 (955)
Q Consensus 329 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~ 408 (955)
+...-...|..+++|+.+.+.++.++..-...|.++.+|+.+++ ..+ ++..-..+
T Consensus 274 i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l------------------------p~~-l~~I~~~a 328 (379)
T 4h09_A 274 VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL------------------------PTA-LKTIQVYA 328 (379)
T ss_dssp CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC------------------------CTT-CCEECTTT
T ss_pred ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc------------------------Ccc-ccEEHHHH
Confidence 22222233444455555555444444333344444444544444 322 22233446
Q ss_pred ccCCCCCcEEECcCCccccccchhccCCC
Q 002186 409 LSNCSSLVRLRLEDNSFSGEIPLKFSQLP 437 (955)
Q Consensus 409 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 437 (955)
|.+|++|+.+.+..+ ++..-..+|.+.+
T Consensus 329 F~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 329 FKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred hhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 777888888777654 4433344555543
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=98.40 E-value=3e-05 Score=86.44 Aligned_cols=315 Identities=10% Similarity=0.046 Sum_probs=159.6
Q ss_pred cccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCC
Q 002186 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL 199 (955)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L 199 (955)
.+....+|+.+.+..+ ++.+-..+|.++.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++..-...|.. .+|
T Consensus 41 ~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDL 115 (379)
T ss_dssp TGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCC
T ss_pred ccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCc
Confidence 4556678888888643 56566678999999999999754 665555677776 6777777644 44333445554 478
Q ss_pred cEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccc
Q 002186 200 EFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279 (955)
Q Consensus 200 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N 279 (955)
+.+.+..+- +..-...+.. .+++...+..+ +...-...+.+...++...+..+........... . +
T Consensus 116 ~~i~lp~~~-~~i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~---------~--~ 181 (379)
T 4h09_A 116 DDFEFPGAT-TEIGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVL---------Y--N 181 (379)
T ss_dssp SEEECCTTC-CEECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEE---------E--E
T ss_pred ccccCCCcc-cccccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeeccccee---------c--c
Confidence 888887552 2222222322 23444443322 1111122334455555555443322110000000 0 0
Q ss_pred cccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCc
Q 002186 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE 359 (955)
Q Consensus 280 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 359 (955)
. .......+.....+..+.+..+. .......+....+|+.+.+..+ +.......+..+..|+.+.+..+ ++..-..
T Consensus 182 ~-~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~ 257 (379)
T 4h09_A 182 K-NKTILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSF 257 (379)
T ss_dssp T-TSSEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTT
T ss_pred c-ccceeccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCcc
Confidence 0 00000112222233333332211 1122233444444444444322 11122233444445555554433 3322333
Q ss_pred ccCCCCCCCeeecCCCcccccCCC-CCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCC
Q 002186 360 NLGRNSKLRWVDVSTNNFNGSIPP-DICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPD 438 (955)
Q Consensus 360 ~~~~~~~L~~L~ls~N~l~g~ip~-~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 438 (955)
.+..+.+|+.+.+..+ +. .++. .+..+.+|+.+.+.++.+...-...|.+|++|+.+.|.++ ++..-..+|.++.+
T Consensus 258 aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 334 (379)
T 4h09_A 258 LLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKA 334 (379)
T ss_dssp TTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred ccceeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCC
Confidence 4445555555555432 22 2222 2333455666666655555555667899999999999765 66455678999999
Q ss_pred CCEEECCCCcCCCCCCcchhhcc
Q 002186 439 INYIDLSRNGFTGGIPTDINQAS 461 (955)
Q Consensus 439 L~~L~Ls~N~l~~~ip~~~~~~~ 461 (955)
|+.+.+..+ ++..-...|.+++
T Consensus 335 L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 335 LSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CCCCCCCTT-CCEECTTTTTTSS
T ss_pred CCEEEECCc-cCEEchhHhhCCC
Confidence 999998655 4432234555543
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.39 E-value=5.5e-08 Score=101.49 Aligned_cols=96 Identities=21% Similarity=0.289 Sum_probs=71.8
Q ss_pred EECCCCcC---cccCCccccCCCCCCEEEccCCcCCc--cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCC--cceEE
Q 002186 106 LNLSHNSF---SGQFPVEIFNLTSLISLDISRNNFSG--HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE--HLKVL 178 (955)
Q Consensus 106 L~Ls~n~l---~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~--~L~~L 178 (955)
++++.|.. .+.++....++++|++|+|++|+|++ .+|..+..+++|++|||++|.+++. ..+..+. +|++|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 66777743 23333333578899999999999988 5567778899999999999999865 3455555 89999
Q ss_pred EecCCCCcccCCC-------CcCCCCCCcEEE
Q 002186 179 NLAGSYFSGPIPS-------QFGSFKSLEFLH 203 (955)
Q Consensus 179 ~Ls~n~l~~~~p~-------~~~~l~~L~~L~ 203 (955)
+|++|.+.+.+|+ .+..+++|+.||
T Consensus 226 ~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 226 WLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp ECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 9999999887663 256677777765
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.24 E-value=2e-07 Score=92.59 Aligned_cols=91 Identities=15% Similarity=0.175 Sum_probs=45.5
Q ss_pred ccCCCCCCEEEccCC-cCCcc----CCccccCCCCCcEEeCCCCCCCCC----CchhhcCCCcceEEEecCCCCccc---
Q 002186 121 IFNLTSLISLDISRN-NFSGH----FPGGIQSLRNLLVLDAFSNSFSGS----VPAEISQLEHLKVLNLAGSYFSGP--- 188 (955)
Q Consensus 121 ~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~LdL~~N~l~~~----~p~~~~~L~~L~~L~Ls~n~l~~~--- 188 (955)
+...++|++|+|++| .+... +...+...++|++|||++|.+... +...+...++|++|+|++|.+...
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 344555555555555 44321 223344445555555555555421 222334445566666666665432
Q ss_pred -CCCCcCCCCCCcEEEc--cCCCCCC
Q 002186 189 -IPSQFGSFKSLEFLHL--AGNLLND 211 (955)
Q Consensus 189 -~p~~~~~l~~L~~L~L--~~N~l~~ 211 (955)
+...+...++|++|+| ++|.+..
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCH
Confidence 2344555556666666 5566543
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.24 E-value=1.3e-07 Score=93.84 Aligned_cols=111 Identities=14% Similarity=0.078 Sum_probs=85.9
Q ss_pred CCCCcEEECCCC-cCccc----CCccccCCCCCCEEEccCCcCCcc----CCccccCCCCCcEEeCCCCCCCCC----Cc
Q 002186 100 FNELVDLNLSHN-SFSGQ----FPVEIFNLTSLISLDISRNNFSGH----FPGGIQSLRNLLVLDAFSNSFSGS----VP 166 (955)
Q Consensus 100 l~~L~~L~Ls~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~LdL~~N~l~~~----~p 166 (955)
.+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|||++|.++.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 467999999999 88642 445567789999999999998642 344566678999999999999753 35
Q ss_pred hhhcCCCcceEEEe--cCCCCccc----CCCCcCCCCCCcEEEccCCCCC
Q 002186 167 AEISQLEHLKVLNL--AGSYFSGP----IPSQFGSFKSLEFLHLAGNLLN 210 (955)
Q Consensus 167 ~~~~~L~~L~~L~L--s~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 210 (955)
..+...++|++|+| ++|.+... +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56777889999999 88998753 3344556688999999988763
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=8.2e-06 Score=87.99 Aligned_cols=137 Identities=13% Similarity=0.061 Sum_probs=94.2
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCC---CceeEeEEEE-cCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHK---NLIRLLGFCY-NRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~g~~~-~~~~~~lv~ey~~~ 770 (955)
..+.++.|....||+. |..++||+-. .......+.+|.+.|+.+.+. .+-+.++++. ..+..++||||++|
T Consensus 23 ~v~~l~~G~~n~v~~v----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 23 SVESLGEGFRNYAILV----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp CEEEEEECSSEEEEEE----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeeecCCCcceeEEEE----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 3445677888889987 5668888743 222355788999999988753 2456677775 45567899999999
Q ss_pred CChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 002186 771 GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHD----------------------------------------------- 803 (955)
Q Consensus 771 gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~----------------------------------------------- 803 (955)
..+.+.....++..++..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 177 (306)
T 3tdw_A 98 QILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQ 177 (306)
T ss_dssp EECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHH
T ss_pred eECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHH
Confidence 888764333344444555555555555555542
Q ss_pred ----------CCCCcccCCCCCCCeeeCC---CCC-ceECccccccc
Q 002186 804 ----------CYPAIPHGDLKASNIVFDE---NME-PHLAEFGFKYL 836 (955)
Q Consensus 804 ----------~~~~iiHrdlk~~NiLl~~---~~~-~ki~DfGl~~~ 836 (955)
..+.++|+|+++.||+++. ++. ..|.||+.+..
T Consensus 178 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 178 SYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235699999999999987 455 48999997654
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=2.9e-05 Score=82.10 Aligned_cols=134 Identities=19% Similarity=0.116 Sum_probs=91.6
Q ss_pred hccCCCCC-ceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 698 EAARPQSA-AGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 698 ~~g~g~~g-~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
.+..|..+ .||+.... +|..+.||+-..+ ....+.+|.+.|+.+. +--+-++++++.+.+..++||||+++.++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 34556666 58988764 4667888986533 3456777888887664 222457888999889999999999988876
Q ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHhcC---------------------------------------------------
Q 002186 775 EKIRTKRDWAAKYKIVLGVARGLCFLHHD--------------------------------------------------- 803 (955)
Q Consensus 775 ~~l~~~~~~~~~~~i~~~ia~gl~~lH~~--------------------------------------------------- 803 (955)
+..... ...+..++.++++.++-||..
T Consensus 109 ~~~~~~--~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 186 (272)
T 4gkh_A 109 QVLEEY--PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKL 186 (272)
T ss_dssp HHHHHC--GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTT
T ss_pred ccccCC--HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhc
Confidence 654321 122234455555555555531
Q ss_pred ----CCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 804 ----CYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 804 ----~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
..+.++|+|+.+.||+++.+..+-|.||+.+.
T Consensus 187 ~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 187 LPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01237899999999999987767799999764
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=2.3e-05 Score=86.60 Aligned_cols=80 Identities=9% Similarity=-0.023 Sum_probs=54.1
Q ss_pred hhhc-cCCCCCceEEEeCC-------CCcEEEEEEeeccc---c-hHHHHHHHHHHHhccCC---CCceeEeEEEEcC--
Q 002186 696 CEEA-ARPQSAAGCKAVLP-------TGITVSVKKIEWGA---T-RIKIVSEFITRIGTVRH---KNLIRLLGFCYNR-- 758 (955)
Q Consensus 696 ~~~~-g~g~~g~vy~~~~~-------~g~~vAvK~~~~~~---~-~~~~~~~e~~~l~~l~H---~niv~l~g~~~~~-- 758 (955)
.+.+ +.|....+|+.... +|..+++|+-.... . ....+.+|++.++.++. -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3456 77888899988764 26778888765432 1 12346677777776643 2456788887665
Q ss_pred -CeeEEEEeecCCCChhH
Q 002186 759 -HQAYLLYDYLPNGNLSE 775 (955)
Q Consensus 759 -~~~~lv~ey~~~gsL~~ 775 (955)
+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35789999999876643
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00038 Score=74.59 Aligned_cols=134 Identities=16% Similarity=0.153 Sum_probs=90.3
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccC---CCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.++.|....+|+... ++..++||.-... ....+..|.+.|+.+. ...+.+.++++...+..++||||+++.
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 455678999999999987 4667888886532 3556778888877764 356778899988888899999999987
Q ss_pred ChhH-----------Hhhc--C----------------------CCHHHHH---HHH--HH--------------HHHHH
Q 002186 772 NLSE-----------KIRT--K----------------------RDWAAKY---KIV--LG--------------VARGL 797 (955)
Q Consensus 772 sL~~-----------~l~~--~----------------------~~~~~~~---~i~--~~--------------ia~gl 797 (955)
.+.. .||. . .+|.+-. ++. .+ +.+.+
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 1221 0 1465321 111 11 11111
Q ss_pred -HHHhc-CCCCCcccCCCCCCCeeeCCCCCceECccc
Q 002186 798 -CFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFG 832 (955)
Q Consensus 798 -~~lH~-~~~~~iiHrdlk~~NiLl~~~~~~ki~DfG 832 (955)
+.|.. ...|.++|+|+.+.|++++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23432 2356899999999999999887 8899974
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00035 Score=76.40 Aligned_cols=135 Identities=17% Similarity=0.193 Sum_probs=78.0
Q ss_pred hhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhcc-----CCCCceeEe-E--EEEcCCeeEEEEeec
Q 002186 697 EEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-----RHKNLIRLL-G--FCYNRHQAYLLYDYL 768 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-----~H~niv~l~-g--~~~~~~~~~lv~ey~ 768 (955)
+.++.|..+.||+....+|. +++|+..... .....|++++..+ ..|.++... | +....+..++||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGA-VCLKRIHRPE---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTEE-EEEEEECSCH---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCCC-EEEEecCCCH---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 34555678899999876664 8899886422 2233344444333 335554411 1 123456789999999
Q ss_pred CCCChh--------------HHhhc---C-------------CCHHHHH-------------------------------
Q 002186 769 PNGNLS--------------EKIRT---K-------------RDWAAKY------------------------------- 787 (955)
Q Consensus 769 ~~gsL~--------------~~l~~---~-------------~~~~~~~------------------------------- 787 (955)
+|..+. ..+|. . ..|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 11121 0 1343211
Q ss_pred HHHHHHHHHHHHHhc----------CCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 788 KIVLGVARGLCFLHH----------DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 788 ~i~~~ia~gl~~lH~----------~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
.+...+.+++++++. ...+.++|+|+++.||+++.+..+.|.||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123445666763 124589999999999999888889999999763
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.42 E-value=3.7e-05 Score=74.17 Aligned_cols=83 Identities=11% Similarity=0.130 Sum_probs=42.0
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCcEEeCCCCC-CCCCCchhhcCC----CcceEEEecCCC-CcccCCCCcCCCCCC
Q 002186 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQL----EHLKVLNLAGSY-FSGPIPSQFGSFKSL 199 (955)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~-l~~~~p~~~~~L----~~L~~L~Ls~n~-l~~~~p~~~~~l~~L 199 (955)
+|++|||+++.++..--..+..+++|++|+|++|. ++..--..+..+ ++|++|+|++|. ++..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555443222334455555566655553 332222234443 256777777653 443222235566677
Q ss_pred cEEEccCCC
Q 002186 200 EFLHLAGNL 208 (955)
Q Consensus 200 ~~L~L~~N~ 208 (955)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777776663
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0002 Score=80.23 Aligned_cols=74 Identities=12% Similarity=0.003 Sum_probs=47.9
Q ss_pred hhhccCCCCCceEEEeCC-CCcEEEEEEeeccc--------chHHHHHHHHHHHhccCC--CCce-eEeEEEEcCCeeEE
Q 002186 696 CEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--------TRIKIVSEFITRIGTVRH--KNLI-RLLGFCYNRHQAYL 763 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~--------~~~~~~~~e~~~l~~l~H--~niv-~l~g~~~~~~~~~l 763 (955)
.+.+|.|..+.||++... +|+.|+||...... ...+.+..|.+.++.+.+ |..| +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 456899999999999864 57889999864321 112345667777776632 4444 45544 3455689
Q ss_pred EEeecCCC
Q 002186 764 LYDYLPNG 771 (955)
Q Consensus 764 v~ey~~~g 771 (955)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.19 E-value=8.4e-05 Score=71.71 Aligned_cols=83 Identities=10% Similarity=0.075 Sum_probs=48.9
Q ss_pred CCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC-CcccCCCCcCCC----CCCcEEEccCCC-CCCCCchhccCCCC
Q 002186 149 RNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY-FSGPIPSQFGSF----KSLEFLHLAGNL-LNDQIPAELGMLKT 222 (955)
Q Consensus 149 ~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~l~~l~~ 222 (955)
.+|+.|||+++.++..--..+..+++|++|+|++|. ++..--..++.+ ++|++|+|++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468888888887765544556777888888888774 443222234443 357777777764 55433333444445
Q ss_pred CcEEecccc
Q 002186 223 VTHMEIGYN 231 (955)
Q Consensus 223 L~~L~l~~n 231 (955)
|++|+++++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555544443
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0013 Score=74.10 Aligned_cols=73 Identities=14% Similarity=0.054 Sum_probs=44.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeec-------c-cc--hHHHHHHHHHHHh-ccCCCCceeEeEEEEcCCeeEE
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEW-------G-AT--RIKIVSEFITRIG-TVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~-------~-~~--~~~~~~~e~~~l~-~l~H~niv~l~g~~~~~~~~~l 763 (955)
..+.+|.|..+.||++.. +++.++||.... . .. ....++.|+..+. ...+..+.+++++. ++..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 345678899999999975 567899994321 1 10 2223333333322 22234566677665 566799
Q ss_pred EEeec-CC
Q 002186 764 LYDYL-PN 770 (955)
Q Consensus 764 v~ey~-~~ 770 (955)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0013 Score=69.99 Aligned_cols=75 Identities=11% Similarity=0.069 Sum_probs=53.0
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCC---CceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHK---NLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~---niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|.|..+.||+.++.||+.|.||+-..... ....+..|.+.|+.+.-. -+.+.+++. ..++||||++.
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 5566889999999999999999999998653322 234577888887766321 234455442 34799999987
Q ss_pred CCh
Q 002186 771 GNL 773 (955)
Q Consensus 771 gsL 773 (955)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0019 Score=69.98 Aligned_cols=135 Identities=10% Similarity=0.033 Sum_probs=78.4
Q ss_pred hccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCC--ceeEeEE-----EEcCCeeEEEEeecCC
Q 002186 698 EAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKN--LIRLLGF-----CYNRHQAYLLYDYLPN 770 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~-----~~~~~~~~lv~ey~~~ 770 (955)
.++ |....||+....+|+.+++|...........+..|.+.+..++... +.+++.. ....+..++||||++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 355 7778999998888888999998643333455666777766553222 3334332 1224567899999987
Q ss_pred CChhH--------------Hhhc-----------CCCHHHH----HHH---------------HHHHHHHHHHHhc----
Q 002186 771 GNLSE--------------KIRT-----------KRDWAAK----YKI---------------VLGVARGLCFLHH---- 802 (955)
Q Consensus 771 gsL~~--------------~l~~-----------~~~~~~~----~~i---------------~~~ia~gl~~lH~---- 802 (955)
..+.. .+|. ..++..- ..+ ...+.+.++.+..
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 54321 0111 0112110 001 0011122233322
Q ss_pred CCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 803 DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 803 ~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
...+.++|+|+++.||+++ + .+.|.||+.+.
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 1234688999999999999 4 89999998764
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0088 Score=64.88 Aligned_cols=32 Identities=19% Similarity=0.216 Sum_probs=26.8
Q ss_pred CCCcccCCCCCCCeeeCCC----CCceECccccccc
Q 002186 805 YPAIPHGDLKASNIVFDEN----MEPHLAEFGFKYL 836 (955)
Q Consensus 805 ~~~iiHrdlk~~NiLl~~~----~~~ki~DfGl~~~ 836 (955)
.+.++|+|+.+.||+++.+ ..+.|.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3479999999999999874 6789999997653
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.003 Score=57.98 Aligned_cols=60 Identities=18% Similarity=0.202 Sum_probs=43.7
Q ss_pred eeeecccccc-ccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccC
Q 002186 537 RIDLANNKLI-GSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIP 598 (955)
Q Consensus 537 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip 598 (955)
.+|.+++.++ ..+|..+. ++|+.|||++|+|+...+..|..+++|++|+|++|++....-
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~ 72 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCR 72 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCc
Confidence 5667777765 34553321 358888899998888888888888899999988888765433
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0012 Score=64.95 Aligned_cols=84 Identities=13% Similarity=0.123 Sum_probs=39.9
Q ss_pred CCCCCEEEccCC-cCCc----cCCccccCCCCCcEEeCCCCCCCC----CCchhhcCCCcceEEEecCCCCccc----CC
Q 002186 124 LTSLISLDISRN-NFSG----HFPGGIQSLRNLLVLDAFSNSFSG----SVPAEISQLEHLKVLNLAGSYFSGP----IP 190 (955)
Q Consensus 124 l~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~LdL~~N~l~~----~~p~~~~~L~~L~~L~Ls~n~l~~~----~p 190 (955)
-+.|++|+|++| .|.. .+-..+..-+.|+.|+|++|.+.. .+-..+..-+.|++|+|++|.+... +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 344555555543 3321 122234444555555555555542 1222333445566666666665431 22
Q ss_pred CCcCCCCCCcEEEccCC
Q 002186 191 SQFGSFKSLEFLHLAGN 207 (955)
Q Consensus 191 ~~~~~l~~L~~L~L~~N 207 (955)
+.+..-+.|++|+|++|
T Consensus 120 ~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHTTTTCCCSEEECCCC
T ss_pred HHHhhCCceeEEECCCC
Confidence 33444455677777654
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.37 E-value=0.00076 Score=66.31 Aligned_cols=108 Identities=12% Similarity=0.085 Sum_probs=75.3
Q ss_pred CCCcEEECCCC-cCcc----cCCccccCCCCCCEEEccCCcCCc----cCCccccCCCCCcEEeCCCCCCCCC----Cch
Q 002186 101 NELVDLNLSHN-SFSG----QFPVEIFNLTSLISLDISRNNFSG----HFPGGIQSLRNLLVLDAFSNSFSGS----VPA 167 (955)
Q Consensus 101 ~~L~~L~Ls~n-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~LdL~~N~l~~~----~p~ 167 (955)
+.|+.|+|++| .|.. .+-..+..-+.|++|+|++|.|.. .+...+..-+.|++|+|++|.|... +-.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 57999999985 7753 234456677899999999999873 2334555678999999999999742 223
Q ss_pred hhcCCCcceEEEecCCC---Ccc----cCCCCcCCCCCCcEEEccCCC
Q 002186 168 EISQLEHLKVLNLAGSY---FSG----PIPSQFGSFKSLEFLHLAGNL 208 (955)
Q Consensus 168 ~~~~L~~L~~L~Ls~n~---l~~----~~p~~~~~l~~L~~L~L~~N~ 208 (955)
.+..-+.|++|+|++|. +.. .+...+..-+.|+.|+++.|.
T Consensus 121 aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 45555779999998653 322 123344556678888887664
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0054 Score=56.18 Aligned_cols=34 Identities=24% Similarity=0.256 Sum_probs=15.1
Q ss_pred CCEEEccCCcCCccCCccccCCCCCcEEeCCCCC
Q 002186 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160 (955)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~ 160 (955)
|++|+|++|+|+...++.|..+++|++|+|++|.
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP 66 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANP 66 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCC
Confidence 4444444444443333344444444444444443
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0029 Score=68.36 Aligned_cols=138 Identities=13% Similarity=0.115 Sum_probs=76.5
Q ss_pred hhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccC-----CCCceeEe-E--EEEcCCeeEEEEee
Q 002186 696 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----HKNLIRLL-G--FCYNRHQAYLLYDY 767 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~-g--~~~~~~~~~lv~ey 767 (955)
.+.++.|....+|+....+| .+++|..... ...+.+..|++.+..++ -|.++... | +....+..++||||
T Consensus 27 ~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eeccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 34466787788999987766 5778887642 12233445666665543 23333210 1 11224567899999
Q ss_pred cCCCChhH--------------Hhhc-------C----C---CHHHHHH------------HHHHHHHHHHHHhcC----
Q 002186 768 LPNGNLSE--------------KIRT-------K----R---DWAAKYK------------IVLGVARGLCFLHHD---- 803 (955)
Q Consensus 768 ~~~gsL~~--------------~l~~-------~----~---~~~~~~~------------i~~~ia~gl~~lH~~---- 803 (955)
++|..+.. .+|. . . .|..... +...+.+.+++++..
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 99765421 1121 0 0 1433111 011234455555532
Q ss_pred CCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 804 CYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 804 ~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
..+.++|+|+.+.||+++.+..+.|.||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 23468999999999999887656899999763
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.0036 Score=66.88 Aligned_cols=71 Identities=7% Similarity=-0.004 Sum_probs=40.7
Q ss_pred hhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCce-eEeEEEEcCCeeEEEEeec-CCCCh
Q 002186 696 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYDYL-PNGNL 773 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~ey~-~~gsL 773 (955)
.+.++.|....+|+. ..+.+|+-..+....-...+|.+.++.+....+. +++++ +++.-++|+||+ ++-++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 456778888999998 4577787654321111224566666555433333 45544 343457899999 55444
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0078 Score=67.72 Aligned_cols=73 Identities=14% Similarity=0.021 Sum_probs=47.3
Q ss_pred hhhccCCCCCceEEEeCCC--------CcEEEEEEeecccchHHHHHHHHHHHhccCCCCc-eeEeEEEEcCCeeEEEEe
Q 002186 696 CEEAARPQSAAGCKAVLPT--------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~e 766 (955)
.+.++.|....+|+...++ +..+.+|+-... ...+.+.+|.++++.+...++ .++++.+. + .+|||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e 152 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE 152 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence 3456778888999998753 578888887431 111344467888777654444 45676653 2 38999
Q ss_pred ecCCCCh
Q 002186 767 YLPNGNL 773 (955)
Q Consensus 767 y~~~gsL 773 (955)
|+++-.+
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986343
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=95.70 E-value=0.021 Score=62.73 Aligned_cols=135 Identities=13% Similarity=0.132 Sum_probs=77.0
Q ss_pred hhccCCCCCceEEEeCCC--------CcEEEEEEeecccchHHHHHHHHHHHhccCCCCc-eeEeEEEEcCCeeEEEEee
Q 002186 697 EEAARPQSAAGCKAVLPT--------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~ey 767 (955)
+.+..|....+|+...++ ++.+.+|+-.........+.+|.++++.+.-..+ -++++++.+ .+||||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 345667778899988753 5788888853322234455678888776643333 356666543 299999
Q ss_pred cCCCChhHH-----------------hhc-------CCC--HHHHHHHHHHHH-------------------HHHHHHh-
Q 002186 768 LPNGNLSEK-----------------IRT-------KRD--WAAKYKIVLGVA-------------------RGLCFLH- 801 (955)
Q Consensus 768 ~~~gsL~~~-----------------l~~-------~~~--~~~~~~i~~~ia-------------------~gl~~lH- 801 (955)
++|..+..- ||. ... |.+..++..++. +.++.|.
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 997554310 111 012 233333333221 1223332
Q ss_pred ---cC-CCCCcccCCCCCCCeeeCCC----CCceECcccccc
Q 002186 802 ---HD-CYPAIPHGDLKASNIVFDEN----MEPHLAEFGFKY 835 (955)
Q Consensus 802 ---~~-~~~~iiHrdlk~~NiLl~~~----~~~ki~DfGl~~ 835 (955)
.. ....++|+|+.+.||+++.+ +.+.+.||..+.
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 22 22368899999999999876 688999999764
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=95.50 E-value=0.014 Score=64.27 Aligned_cols=73 Identities=10% Similarity=-0.013 Sum_probs=42.0
Q ss_pred hhccCCCCCceEEEeCCC---------CcEEEEEEeecccchHHHHHHHHHHHhccCCCCce-eEeEEEEcCCeeEEEEe
Q 002186 697 EEAARPQSAAGCKAVLPT---------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~---------g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~e 766 (955)
..++.|....+|+....+ +..+.+|+-............|.+.++.+....++ ++++.. + -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 456677788899988654 26788887654322211235667777666433443 566544 2 368999
Q ss_pred ecCCCCh
Q 002186 767 YLPNGNL 773 (955)
Q Consensus 767 y~~~gsL 773 (955)
|++|..+
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987543
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=95.24 E-value=0.021 Score=64.55 Aligned_cols=74 Identities=8% Similarity=-0.073 Sum_probs=46.1
Q ss_pred hhhccCCCCCceEEEeCCC-CcEEEEEEeecccchHHHHHHHHHHHhccCCCCce-eEeEEEEcCCeeEEEEeecCCCCh
Q 002186 696 CEEAARPQSAAGCKAVLPT-GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
.+.++.|-...+|+...++ +..+.+|+-.......-....|.++++.+...+++ ++++++. + .+||||+++-.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 4557778888999998765 57788887643221111125677777777655554 6777662 2 259999987444
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=94.69 E-value=0.11 Score=56.28 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=27.0
Q ss_pred CCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 806 PAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 806 ~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
+.++|+|+.+.||+++.++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4689999999999999888899999987643
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=90.91 E-value=0.26 Score=54.84 Aligned_cols=74 Identities=3% Similarity=-0.067 Sum_probs=44.6
Q ss_pred hhhccCCCCCceEEEeCCC--------CcEEEEEEeecccchHHHHHHHHHHHhccCCCCce-eEeEEEEcCCeeEEEEe
Q 002186 696 CEEAARPQSAAGCKAVLPT--------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~e 766 (955)
.+.+..|....+|+...++ +..+.+|+-..+....-...+|.++++.+.-..++ ++++.+ . -++|||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~e 150 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEE 150 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEE
Confidence 3445667778899988753 57888888643322111234566666665433343 455543 2 278999
Q ss_pred ecCCCCh
Q 002186 767 YLPNGNL 773 (955)
Q Consensus 767 y~~~gsL 773 (955)
|++|..+
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998553
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=83.58 E-value=8.8 Score=37.82 Aligned_cols=99 Identities=15% Similarity=0.066 Sum_probs=59.2
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC-CCCCeeeCCCCCceECcccccccccccCCCCcc
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL-KASNIVFDENMEPHLAEFGFKYLTQLADGSFPA 846 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdl-k~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~ 846 (955)
-||.+.|.. .+...+.+.++.|.+++|.-.-....+ |..| -|..|++..+|.+...+ +.+. ..
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~---~~~i~~~~~i~l~~dG~V~f~~-~~s~---~~------ 99 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP---RHRVRSAAQIRVWRDGAVTLAP-AADD---AG------ 99 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC---CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC---CceecCCcceEEecCCceeccc-cccc---cc------
Confidence 368888864 678889999999999988665211111 2222 36888999998887764 2110 00
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHhCCCC
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 884 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p 884 (955)
..+ ..+|+... ...+.+.=|||+|+++|.-+--+.|
T Consensus 100 ~~~-~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 100 EPP-PVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ccC-CCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 011 22333321 2345677899999999998764433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 955 | ||||
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 9e-34 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 9e-33 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-32 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-32 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 8e-32 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 6e-30 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 1e-29 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-29 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 1e-28 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 4e-28 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 1e-27 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 3e-27 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 4e-27 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 4e-27 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 8e-27 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 8e-27 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 3e-26 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-25 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 1e-25 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-25 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 6e-25 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 9e-25 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-24 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-24 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-23 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 9e-19 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-09 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-09 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-23 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-23 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 5e-23 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 5e-23 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 5e-23 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 5e-23 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 7e-23 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 3e-22 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-10 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 9e-23 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-22 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 4e-19 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 6e-19 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 9e-15 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 5e-06 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-22 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-22 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 6e-22 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 8e-22 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 8e-22 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-20 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-19 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 4e-16 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 9e-16 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 4e-15 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 5e-10 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 4e-09 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 3e-06 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 2e-19 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-18 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-18 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-18 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 4e-18 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 5e-18 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-17 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-17 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 2e-16 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-16 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 6e-16 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-15 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 9e-15 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 1e-14 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 2e-14 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 4e-14 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 5e-14 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 1e-13 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 1e-13 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 8e-13 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 9e-13 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 4e-11 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 7e-09 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 9e-09 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 1e-08 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 1e-12 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 2e-12 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 3e-12 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 5e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-08 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-07 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-04 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 7e-12 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 8e-12 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 1e-10 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 4e-10 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-07 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-07 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 4e-06 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 3e-04 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-05 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-05 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-04 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 0.003 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 8e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 9e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.003 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 1e-07 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 2e-06 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 2e-07 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 5e-05 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.001 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.002 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 3e-07 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 4e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 5e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 8e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.002 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 4e-06 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 3e-05 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 6e-04 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 5e-06 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 4e-05 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 6e-06 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 7e-06 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 3e-05 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 0.003 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 0.004 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 7e-06 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 5e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.003 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.003 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 8e-05 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 6e-04 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.001 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.002 | |
| d1m9la_ | 198 | c.10.3.1 (A:) Outer arm dynein light chain 1 {Gree | 2e-04 |
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (323), Expect = 9e-34
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 20/246 (8%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCY-NRHQAYLLYDYLPNGN 772
G V+VK I+ AT ++E + + +RH NL++LLG + Y++ +Y+ G+
Sbjct: 29 RGNKVAVKCIKNDATAQAFLAE-ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 87
Query: 773 LSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828
L + +R++ K L V + +L + H DL A N++ E+ +
Sbjct: 88 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKV 144
Query: 829 AEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 888
++FG + + WT + E K DV+ FG ++ EI + GR+
Sbjct: 145 SDFGLTKEASSTQDTGKLPVKWT-APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 203
Query: 889 SSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTPSDRPSMEEALKLL 947
L+ ++ E G D V +V C + RPS + + L
Sbjct: 204 IPLK---------DVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQL 254
Query: 948 SGLKPH 953
+K H
Sbjct: 255 EHIKTH 260
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (317), Expect = 9e-33
Identities = 49/249 (19%), Positives = 97/249 (38%), Gaps = 23/249 (9%)
Query: 717 TVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773
V+VK + A + + F + RH N++ +G+ Q ++ + +L
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL 90
Query: 774 SEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830
+ + I A+G+ +LH I H DLK++NI E++ + +
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 147
Query: 831 FGFKYLTQLADGSFPAK-----IAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNG 882
FG + GS + I W + E + Y DVY FG ++ E++T G
Sbjct: 148 FGLATVKSRWSGSHQFEQLSGSILWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT-G 205
Query: 883 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEE 942
+L + + +++ I + + + S+ +K + C + +RP +
Sbjct: 206 QLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK---RLMAECLKKKRDERPLFPQ 262
Query: 943 ALKLLSGLK 951
L + L
Sbjct: 263 ILASIELLA 271
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (318), Expect = 1e-32
Identities = 53/278 (19%), Positives = 96/278 (34%), Gaps = 35/278 (12%)
Query: 708 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYL 763
+ G V+VK R I + +RH+N++ + + Q +L
Sbjct: 20 WRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78
Query: 764 LYDYLPNGNLSEKI-RTKRDWAAKYKIVLGVARGLCFLHHDCY-----PAIPHGDLKASN 817
+ DY +G+L + + R K+ L A GL LH + PAI H DLK+ N
Sbjct: 79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 138
Query: 818 IVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA---MKEEMYM-------- 866
I+ +N +A+ G A + + Y A + + + M
Sbjct: 139 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 198
Query: 867 -DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN------------EVGSSS 913
D+Y G + EI + Q D + + E + +
Sbjct: 199 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW 258
Query: 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951
+ ++++ + C + + R + K LS L
Sbjct: 259 QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 2e-32
Identities = 46/252 (18%), Positives = 95/252 (37%), Gaps = 17/252 (6%)
Query: 709 KAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768
V++K I GA + E + + H L++L G C + L+++++
Sbjct: 23 LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 82
Query: 769 PNGNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
+G LS+ +RT+ + L V G + + + H DL A N + EN
Sbjct: 83 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEG---MAYLEEACVIHRDLAARNCLVGENQV 139
Query: 826 PHLAEFGFKYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEILTNG 882
+++FG + + S E ++ + DV+ FG ++ E+ + G
Sbjct: 140 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 199
Query: 883 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEE 942
++ S ++ ++ + + + C + P DRP+
Sbjct: 200 KIPYENRSNSE-----VVEDISTGFRLYKPRLASTHVY---QIMNHCWKERPEDRPAFSR 251
Query: 943 ALKLLSGLKPHG 954
L+ L+ + G
Sbjct: 252 LLRQLAEIAESG 263
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (309), Expect = 8e-32
Identities = 48/250 (19%), Positives = 101/250 (40%), Gaps = 25/250 (10%)
Query: 708 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767
V+VK ++ G+ + ++H+ L+RL Y++ +Y
Sbjct: 30 WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEY 88
Query: 768 LPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 823
+ NG+L + ++T + +A G+ F+ H DL+A+NI+ +
Sbjct: 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDT 145
Query: 824 MEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM------DVYGFGEIILE 877
+ +A+FG L +L + + + + A + Y DV+ FG ++ E
Sbjct: 146 LSCKIADFG---LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 878 ILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR 937
I+T+GR+ G + ++ + + + +E+ + LC + P DR
Sbjct: 203 IVTHGRIPYPGMTNPE-----VIQNLERGYRMVRPDNCPEELY---QLMRLCWKERPEDR 254
Query: 938 PSMEEALKLL 947
P+ + +L
Sbjct: 255 PTFDYLRSVL 264
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (296), Expect = 6e-30
Identities = 47/247 (19%), Positives = 97/247 (39%), Gaps = 21/247 (8%)
Query: 709 KAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768
V++K ++ G + + + +RH+ L++L Y++ +Y+
Sbjct: 35 MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYM 93
Query: 769 PNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM 824
G+L + ++ + + +A G+ ++ H DL+A+NI+ EN+
Sbjct: 94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENL 150
Query: 825 EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTN 881
+A+FG L + + + + A + DV+ FG ++ E+ T
Sbjct: 151 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 210
Query: 882 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTPSDRPSM 940
GR+ G + E+ ++ E G E + + D+ C R P +RP+
Sbjct: 211 GRVPYPGMVNR---------EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 261
Query: 941 EEALKLL 947
E L
Sbjct: 262 EYLQAFL 268
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (291), Expect = 1e-29
Identities = 37/246 (15%), Positives = 84/246 (34%), Gaps = 17/246 (6%)
Query: 708 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767
V++K I+ G+ E + + H+ L++L G C + +++ +Y
Sbjct: 21 KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 80
Query: 768 LPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM 824
+ NG L +R R ++ V + +L H DL A N + ++
Sbjct: 81 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQG 137
Query: 825 EPHLAEFGFKYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEILTN 881
+++FG + + + E K D++ FG ++ EI +
Sbjct: 138 VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 197
Query: 882 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 941
G++ + + + +++ + C +RP+ +
Sbjct: 198 GKMPYERFTNSE-----TAEHIAQGLRLYRPHLASEKVY---TIMYSCWHEKADERPTFK 249
Query: 942 EALKLL 947
L +
Sbjct: 250 ILLSNI 255
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 116 bits (292), Expect = 3e-29
Identities = 43/253 (16%), Positives = 98/253 (38%), Gaps = 25/253 (9%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
I V++K ++ G T K +F++ G H N+I L G ++ +++ N
Sbjct: 53 REIFVAIKTLKSGYTE-KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMEN 111
Query: 771 GNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
G+L +R ++ G+A G+ +L H DL A NI+ + N+
Sbjct: 112 GSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCK 168
Query: 828 LAEFGF-KYLTQLADGSFPAKIAWTESGEFYNA---MKEEMYM---DVYGFGEIILEILT 880
+++FG ++L + + A ++ + DV+ +G ++ E+++
Sbjct: 169 VSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 228
Query: 881 NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSM 940
G + Q+ ++ + + + + + L C + + RP
Sbjct: 229 YGERPYWDMTNQD-----VINAIEQDYRLPPPMDCPSALH---QLMLDCWQKDRNHRPKF 280
Query: 941 EEALKLLSGLKPH 953
+ + L + +
Sbjct: 281 GQIVNTLDKMIRN 293
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 114 bits (286), Expect = 1e-28
Identities = 51/251 (20%), Positives = 96/251 (38%), Gaps = 21/251 (8%)
Query: 709 KAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767
+ V +TV+VK ++ ++ + + ++H NL++LLG C Y++ ++
Sbjct: 35 EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 94
Query: 768 LPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 823
+ GNL + +R + ++ + +L H DL A N + EN
Sbjct: 95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGEN 151
Query: 824 MEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILT 880
+A+FG L + A + ++ + DV+ FG ++ EI T
Sbjct: 152 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
Query: 881 NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTPSDRPS 939
G G L ++Y E + + V ++ C + PSDRPS
Sbjct: 212 YGMSPYPGIDLS---------QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 262
Query: 940 MEEALKLLSGL 950
E + +
Sbjct: 263 FAEIHQAFETM 273
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (283), Expect = 4e-28
Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 26/246 (10%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
I V++K ++ G + E + + + ++RL+G C L+ +
Sbjct: 35 KQIDVAIKVLKQGTEK-ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGG 92
Query: 771 GNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
G L + + KR + +++ V+ G+ +L H DL A N++
Sbjct: 93 GPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAK 149
Query: 828 LAEFGFKYLTQLADGSFPAKIAWTESGEFY--NAMKEEMYM---DVYGFGEIILEILTNG 882
+++FG D + A+ A ++Y + + DV+ +G + E L+ G
Sbjct: 150 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYG 209
Query: 883 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTPSDRPSME 941
+ E+ E G E + + C DRP
Sbjct: 210 QKPYKKMKGP---------EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFL 260
Query: 942 EALKLL 947
+ +
Sbjct: 261 TVEQRM 266
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (280), Expect = 1e-27
Identities = 47/265 (17%), Positives = 86/265 (32%), Gaps = 37/265 (13%)
Query: 713 PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
+TV+VK ++ A R ++SE H N++ LLG C ++ +Y
Sbjct: 51 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 110
Query: 770 NGNLSEKIRTKR--------------------DWAAKYKIVLGVARGLCFLHHDCYPAIP 809
G+L +R KR D VA+G+ FL
Sbjct: 111 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CI 167
Query: 810 HGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMD-- 867
H DL A NI+ + +FG + A
Sbjct: 168 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 227
Query: 868 --VYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925
V+ +G + E+ + G G + +K + + + + + D+
Sbjct: 228 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY-------DI 280
Query: 926 ALLCTRSTPSDRPSMEEALKLLSGL 950
C + P RP+ ++ ++L+
Sbjct: 281 MKTCWDADPLKRPTFKQIVQLIEKQ 305
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (277), Expect = 3e-27
Identities = 55/252 (21%), Positives = 91/252 (36%), Gaps = 29/252 (11%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCY-NRHQAYLLYDYLP 769
I +VK + T I VS+F+T H N++ LLG C + ++ Y+
Sbjct: 54 KKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 112
Query: 770 NGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826
+G+L IR + L VA+G+ H DL A N + DE
Sbjct: 113 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGM---KFLASKKFVHRDLAARNCMLDEKFTV 169
Query: 827 HLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM--------DVYGFGEIILEI 878
+A+FG + D F + T + M E DV+ FG ++ E+
Sbjct: 170 KVADFGLA--RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 227
Query: 879 LTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP 938
+T G + + + + + D + +V L C RP
Sbjct: 228 MTRGAPPYPDVNTFD-----ITVYLLQGRRLLQPEYCPDPLY---EVMLKCWHPKAEMRP 279
Query: 939 SMEEALKLLSGL 950
S E + +S +
Sbjct: 280 SFSELVSRISAI 291
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 110 bits (275), Expect = 4e-27
Identities = 53/273 (19%), Positives = 104/273 (38%), Gaps = 51/273 (18%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
V+VK ++ A+ + ++F + N+++LLG C LL++Y+
Sbjct: 42 PFTMVAVKMLKEEASA-DMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAY 100
Query: 771 GNLSEKIRTKR--------------------------DWAAKYKIVLGVARGLCFLHHDC 804
G+L+E +R+ A + I VA G+ +L
Sbjct: 101 GDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK 160
Query: 805 YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEM 864
H DL N + ENM +A+FG L++ + K ++ E +
Sbjct: 161 ---FVHRDLATRNCLVGENMVVKIADFG---LSRNIYSADYYKADGNDAIPIRWMPPESI 214
Query: 865 YM-------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917
+ DV+ +G ++ EI + G G + + ++ + + N + +
Sbjct: 215 FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE-----VIYYVRDGNILACPENCPL 269
Query: 918 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950
E+ ++ LC P+DRPS ++L +
Sbjct: 270 ELY---NLMRLCWSKLPADRPSFCSIHRILQRM 299
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 110 bits (276), Expect = 4e-27
Identities = 50/243 (20%), Positives = 92/243 (37%), Gaps = 22/243 (9%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAYLLYDY 767
+ V++KK+ + + + I + + +RH N I+ G H A+L+ +Y
Sbjct: 37 VRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96
Query: 768 LPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
K+ + G +GL +LH + H D+KA NI+ E
Sbjct: 97 CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGL 153
Query: 826 PHLAEFGFKYLTQLAD---GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 882
L +FG + A+ G+ P +A E + + + +DV+ G +E+
Sbjct: 154 VKLGDFGSASIMAPANSFVGT-PYWMAP-EVILAMDEGQYDGKVDVWSLGITCIELAE-R 210
Query: 883 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEE 942
+ + + L NE+ S + + + C + P DRP+ E
Sbjct: 211 KPPLFNMN----AMSALYHIAQNESPALQSGHWSEYFR---NFVDSCLQKIPQDRPTSEV 263
Query: 943 ALK 945
LK
Sbjct: 264 LLK 266
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (275), Expect = 8e-27
Identities = 47/266 (17%), Positives = 87/266 (32%), Gaps = 42/266 (15%)
Query: 714 TGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
I V+VK ++ A R ++SE H+N++ LLG C YL+++Y
Sbjct: 66 VSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCY 125
Query: 771 GNLSEKIRTKR-------------------------DWAAKYKIVLGVARGLCFLHHDCY 805
G+L +R+KR + VA+G+ FL
Sbjct: 126 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--- 182
Query: 806 PAIPHGDLKASNIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWT---ESGEFYNAMK 861
+ H DL A N++ + +FG + + ++ + E
Sbjct: 183 KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI 242
Query: 862 EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921
+ DV+ +G ++ EI + G G + + + ++ +
Sbjct: 243 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIY----- 297
Query: 922 VLDVALLCTRSTPSDRPSMEEALKLL 947
+ C RPS L
Sbjct: 298 --IIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (272), Expect = 8e-27
Identities = 44/245 (17%), Positives = 85/245 (34%), Gaps = 24/245 (9%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
TV+VK ++ A + E + + + ++R++G C L+ +
Sbjct: 33 VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAEL 91
Query: 771 GNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828
G L++ ++ R ++V V+ G+ +L H DL A N++ +
Sbjct: 92 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKI 148
Query: 829 AEFGF------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 882
++FG A + W + E N K DV+ FG ++ E + G
Sbjct: 149 SDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYG 207
Query: 883 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEE 942
+ G + + +G + E+ D+ LC +RP
Sbjct: 208 QKPYRGMKGSE-----VTAMLEKGERMGCPAGCPREMY---DLMNLCWTYDVENRPGFAA 259
Query: 943 ALKLL 947
L
Sbjct: 260 VELRL 264
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (267), Expect = 3e-26
Identities = 41/246 (16%), Positives = 84/246 (34%), Gaps = 22/246 (8%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
+ V++K + T + +F+ H ++++L+G +++ +
Sbjct: 34 PALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTL 91
Query: 771 GNLSE---KIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
G L + D A+ ++ L +L H D+ A N++ N
Sbjct: 92 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVK 148
Query: 828 LAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM---DVYGFGEIILEILTNGRL 884
L +FG + + +K ++ + DV+ FG + EIL +G
Sbjct: 149 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 208
Query: 885 TNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEAL 944
G + ++G + N + + + + C PS RP E
Sbjct: 209 PFQGVKNND-----VIGRIENGERLPMPPNCPPTLY---SLMTKCWAYDPSRRPRFTELK 260
Query: 945 KLLSGL 950
LS +
Sbjct: 261 AQLSTI 266
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (263), Expect = 1e-25
Identities = 52/262 (19%), Positives = 101/262 (38%), Gaps = 28/262 (10%)
Query: 708 CKAVLPTG-----ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH 759
K +L T + V++K ++ G T R+ + E +G H N+IRL G
Sbjct: 24 YKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGE-AGIMGQFSHHNIIRLEGVISKYK 82
Query: 760 QAYLLYDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKAS 816
++ +Y+ NG L + +R K ++ G+A G+ + H DL A
Sbjct: 83 PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM---KYLANMNYVHRDLAAR 139
Query: 817 NIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWTESG----EFYNAMKEEMYMDVYGF 871
NI+ + N+ +++FG + L + ++ E + K DV+ F
Sbjct: 140 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 199
Query: 872 GEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTR 931
G ++ E++T G S + + N+ + D + + + C +
Sbjct: 200 GIVMWEVMTYGERPYWELSNHE------VMKAINDGFRLPTPM--DCPSAIYQLMMQCWQ 251
Query: 932 STPSDRPSMEEALKLLSGLKPH 953
+ RP + + +L L
Sbjct: 252 QERARRPKFADIVSILDKLIRA 273
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (265), Expect = 1e-25
Identities = 59/264 (22%), Positives = 100/264 (37%), Gaps = 37/264 (14%)
Query: 716 ITVSVKKIEWGATRIKIVSEFITRIGTV----RHKNLIRLLGFCYNRHQAYLLYDYLPNG 771
+ ++K+++ A++ +F + + H N+I LLG C +R YL +Y P+G
Sbjct: 38 MDAAIKRMKEYASK-DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 96
Query: 772 NLSEKIRTKR------------------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 813
NL + +R R VARG+ +L H DL
Sbjct: 97 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDL 153
Query: 814 KASNIVFDENMEPHLAEFGF--KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGF 871
A NI+ EN +A+FG + + W E N DV+ +
Sbjct: 154 AARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAI-ESLNYSVYTTNSDVWSY 212
Query: 872 GEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTR 931
G ++ EI++ G G + L ++ + + DE+ D+ C R
Sbjct: 213 GVLLWEIVSLGGTPYCGMTCAE-----LYEKLPQGYRLEKPLNCDDEVY---DLMRQCWR 264
Query: 932 STPSDRPSMEEALKLLSGLKPHGK 955
P +RPS + L L+ + K
Sbjct: 265 EKPYERPSFAQILVSLNRMLEERK 288
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (265), Expect = 2e-25
Identities = 43/274 (15%), Positives = 89/274 (32%), Gaps = 44/274 (16%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYL 768
P+G+ ++ K I + I ++ I + ++ G Y+ + + +++
Sbjct: 28 KPSGLVMARKLIH-LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 86
Query: 769 PNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826
G+L + ++ K+ + V +GL +L I H D+K SNI+ + E
Sbjct: 87 DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEI 144
Query: 827 HLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLT 885
L +FG L SF ++ S E + D++ G ++E+
Sbjct: 145 KLCDFGVSGQLIDSMANSFVGTRSYM-SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Query: 886 NAGSSLQ--------------------NKPIDGLLGEMYNENEVGSSSSLQDEI------ 919
+ + P L + + L D I
Sbjct: 204 PPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPP 263
Query: 920 --------KLVLDVALLCTRSTPSDRPSMEEALK 945
D C P++R +++ +
Sbjct: 264 KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (259), Expect = 6e-25
Identities = 59/271 (21%), Positives = 104/271 (38%), Gaps = 44/271 (16%)
Query: 709 KAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV----RHKNLIRLLGFCYNRHQAYLL 764
K V+VK ++ AT K +S+ I+ + + +HKN+I LLG C Y++
Sbjct: 39 KDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 97
Query: 765 YDYLPNGNLSEKIRTKR------------------DWAAKYKIVLGVARGLCFLHHDCYP 806
+Y GNL E ++ +R VARG+ +L
Sbjct: 98 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---K 154
Query: 807 AIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM 866
H DL A N++ E+ +A+F L + K E ++
Sbjct: 155 KCIHRDLAARNVLVTEDNVMKIADF---GLARDIHHIDYYKKTTNGRLPVKWMAPEALFD 211
Query: 867 -------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919
DV+ FG ++ EI T G G P++ L + + + S+ +E+
Sbjct: 212 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-----PVEELFKLLKEGHRMDKPSNCTNEL 266
Query: 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950
+ C + PS RP+ ++ ++ L +
Sbjct: 267 Y---MMMRDCWHAVPSQRPTFKQLVEDLDRI 294
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (256), Expect = 9e-25
Identities = 48/251 (19%), Positives = 89/251 (35%), Gaps = 28/251 (11%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQA--YLLYD 766
G + K++++G+ ++ + ++H N++R +R Y++ +
Sbjct: 26 KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 85
Query: 767 YLPNGNLSEKIRTKR------DWAAKYKIVLGVARGLCFLH--HDCYPAIPHGDLKASNI 818
Y G+L+ I D +++ + L H D + H DLK +N+
Sbjct: 86 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANV 145
Query: 819 VFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWT---ESGEFYNAMKEEMYMDVYGFGEI 874
D L +FG + L D SF T S E N M D++ G +
Sbjct: 146 FLDGKQNVKLGDFGLARILNH--DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCL 203
Query: 875 ILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTP 934
+ E+ S + L G++ DE+ ++
Sbjct: 204 LYELCA-LMPPFTAFSQKE-----LAGKIREGKFRRIPYRYSDELN---EIITRMLNLKD 254
Query: 935 SDRPSMEEALK 945
RPS+EE L+
Sbjct: 255 YHRPSVEEILE 265
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (254), Expect = 2e-24
Identities = 47/246 (19%), Positives = 97/246 (39%), Gaps = 23/246 (9%)
Query: 714 TGITVSVKKIEWG-ATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
++V+VK ++ ++ + + +FI + ++ H+NLIRL G ++ + P
Sbjct: 35 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAP 93
Query: 770 NGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826
G+L +++R + + + VA G+ +L H DL A N++
Sbjct: 94 LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLV 150
Query: 827 HLAEFGFKYLTQLADGSFPAK--IAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTN 881
+ +FG D + + + ++K + D + FG + E+ T
Sbjct: 151 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 210
Query: 882 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 941
G+ G + +L ++ E E +D + + +V + C P DRP+
Sbjct: 211 GQEPWIGLNGSQ-----ILHKIDKEGE--RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
Query: 942 EALKLL 947
L
Sbjct: 264 ALRDFL 269
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 104 bits (259), Expect = 2e-24
Identities = 70/392 (17%), Positives = 132/392 (33%), Gaps = 49/392 (12%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
E + L + + V +L + +L R G++ L NL ++ +N
Sbjct: 21 LAEKMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGIKS--IDGVEYLNNLTQINFSNN 76
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ P + L L + + + + P L +
Sbjct: 77 QLTDITP--LKNLTKLVDILMNNNQIADITPLAN---------LTNLTGLTLFNNQITDI 125
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
+ N + +S + L + K L+NLT LE L + N
Sbjct: 126 DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSN 185
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
+ +++T L+SL ++N++S P NL LSL N++ +L
Sbjct: 186 K--VSDISVLAKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKD--IGTLAS 239
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV--------- 390
L +L L + NN S P L +KL + + N + P +
Sbjct: 240 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQL 297
Query: 391 -----------LFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDI 439
L L L+ NN + +S+ + L RL +N S + L +I
Sbjct: 298 EDISPISNLKNLTYLTLYFNNISD--ISPVSSLTKLQRLFFANNKVSD--VSSLANLTNI 353
Query: 440 NYIDLSRNGFTGGIPTDINQASKLEYFNVSNN 471
N++ N + P + +++ +++
Sbjct: 354 NWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 101 bits (251), Expect = 2e-23
Identities = 62/385 (16%), Positives = 146/385 (37%), Gaps = 57/385 (14%)
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
++E + N++ ++ + ++L ++ +L R + + + L ++ S+
Sbjct: 20 ALAEKMKTVLGKTNVTDTVSQ--TDLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSN 75
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE--------------------------- 335
N+L+ P +L L + + N+++ P
Sbjct: 76 NQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTN 133
Query: 336 ---------SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDIC 386
++ + +L L G+ +L + L ++ + N +
Sbjct: 134 LNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVL 193
Query: 387 SGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSR 446
+ + ++ +NN ++P ++L L L N + L ++ +DL+
Sbjct: 194 AKLTNLESLIATNNQISDITPL-GILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 250
Query: 447 NGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFK 506
N + P ++ +KL + N ++ + P + + + N ++ P
Sbjct: 251 NQISNLAP--LSGLTKLTELKLGAN-QISNISPLAGLTALTNLELN---ENQLEDISPIS 304
Query: 507 SCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSH 566
+ K+++ + + NN+S P VS+ +L+R+ ANNK+ S LA L + L H
Sbjct: 305 NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKV--SDVSSLANLTNINWLSAGH 360
Query: 567 NSLSGQIPAKFGSCSSLTVLNVSFN 591
N +S P + + +T L ++
Sbjct: 361 NQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 87.4 bits (215), Expect = 9e-19
Identities = 60/340 (17%), Positives = 116/340 (34%), Gaps = 31/340 (9%)
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
+ ++ + ++ + L+ P L NLTKL + + NQ+A P T +L
Sbjct: 62 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 119
Query: 301 SDNRLSGPIPE------------SFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFI 348
+ P+ + +D+ L L+ + G L L +L L
Sbjct: 120 NQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLER 179
Query: 349 WNNYFSGSLPENLGRNSKLRWV-DVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSP 407
+ + ++ + N + P I + L +L L N
Sbjct: 180 LDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN--LDELSLNGNQLKDI--G 235
Query: 408 SLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFN 467
+L++ ++L L L +N S P S L + + L N + P L
Sbjct: 236 TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLA-----GLTALT 288
Query: 468 VSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPE 527
+ + +L +L + NI+ + P S + + N +S
Sbjct: 289 NLELNENQLEDISPISNLKNLTYLTLYFNNISD-ISPVSSLTKLQRLFFANNKVSD--VS 345
Query: 528 SVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHN 567
S++N + + +N++ P LA L + L L+
Sbjct: 346 SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 58.9 bits (141), Expect = 1e-09
Identities = 55/330 (16%), Positives = 107/330 (32%), Gaps = 41/330 (12%)
Query: 308 PIPESFAD--LKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS 365
PI + F D L L ++ TV ++ L + L S+ + + +
Sbjct: 11 PINQIFTDTALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK-SI-DGVEYLN 66
Query: 366 KLRWVDVSTNNFNGSIP----------PDICSGGVLFKLILFSNNFTGSLSPSLSNCSSL 415
L ++ S N P + + N TG +
Sbjct: 67 NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID 126
Query: 416 VRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLG 475
L + + S + ++ + + G TD+ + L +
Sbjct: 127 PLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK 186
Query: 476 GMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVEL 535
+ L +L++ A+ I+ + P ++ + + N L ++++ L
Sbjct: 187 VSDISVLAKLTNLESLIATNNQISD-ITPLGILTNLDELSLNGNQLKD--IGTLASLTNL 243
Query: 536 ERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIP--------------------A 575
+DLANN++ P L+ L L L L N +S P +
Sbjct: 244 TDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDIS 301
Query: 576 KFGSCSSLTVLNVSFNDISGSIPSGKVLRL 605
+ +LT L + FN+IS P + +L
Sbjct: 302 PISNLKNLTYLTLYFNNISDISPVSSLTKL 331
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 57.7 bits (138), Expect = 3e-09
Identities = 29/148 (19%), Positives = 50/148 (33%), Gaps = 12/148 (8%)
Query: 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV 119
+ S + T + + L +S P L N ++ N +
Sbjct: 248 LANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDIS------ 301
Query: 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179
I NL +L L + NN S P + SL L L +N S + ++ L ++ L+
Sbjct: 302 PISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLS 357
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGN 207
+ S P + + L L
Sbjct: 358 AGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (250), Expect = 1e-23
Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 31/258 (12%)
Query: 713 PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
V++K + A+ RI+ ++E + + +++RLLG ++ + +
Sbjct: 48 EPETRVAIKTVNEAASMRERIEFLNE-ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMT 106
Query: 770 NGNLSEKIRTKR------------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASN 817
G+L +R+ R + ++ +A G+ +L+ + H DL A N
Sbjct: 107 RGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARN 163
Query: 818 IVFDENMEPHLAEFGFKYLTQLADGSFPAKIA----WTESGEFYNAMKEEMYMDVYGFGE 873
+ E+ + +FG D S E Y DV+ FG
Sbjct: 164 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV 223
Query: 874 IILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRST 933
++ EI T G S + +L + + + D + ++ +C +
Sbjct: 224 VLWEIATLAEQPYQGLSNEQ-----VLRFVMEGGLLDKPDNCPDMLF---ELMRMCWQYN 275
Query: 934 PSDRPSMEEALKLLSGLK 951
P RPS E + +
Sbjct: 276 PKMRPSFLEIISSIKEEM 293
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 100 bits (251), Expect = 2e-23
Identities = 49/244 (20%), Positives = 94/244 (38%), Gaps = 22/244 (9%)
Query: 712 LPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
TG + K + + + + E I + +RH L+ L + ++ ++Y+++
Sbjct: 48 RATGNNFAAKFVMTPHESDKETVRKE-IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 106
Query: 770 NGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF--DENM 824
G L EK+ + + + V +GLC +H + H DLK NI+F +
Sbjct: 107 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSN 163
Query: 825 EPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGR 883
E L +FG +L A + E Y D++ G + +L+ G
Sbjct: 164 ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS-GL 222
Query: 884 LTNAGSSLQN--KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 941
G + + + M + G S +D I+ +L P+ R ++
Sbjct: 223 SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLA-------DPNTRMTIH 275
Query: 942 EALK 945
+AL+
Sbjct: 276 QALE 279
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.8 bits (243), Expect = 5e-23
Identities = 44/247 (17%), Positives = 84/247 (34%), Gaps = 27/247 (10%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYL 768
T V+VK ++ + I + H+N+++ G + YL +Y
Sbjct: 27 RVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 85
Query: 769 PNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826
G L ++I + + G+ +LH I H D+K N++ DE
Sbjct: 86 SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNL 142
Query: 827 HLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNA----MKEEMY---MDVYGFGEIILEI 878
+++FG K+ T Y A + E + +DV+ G ++ +
Sbjct: 143 KISDFGLATVFRYNNRERLLNKMCGT---LPYVAPELLKRREFHAEPVDVWSCGIVLTAM 199
Query: 879 LTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP 938
L + S + D + Y S+ + +L PS R
Sbjct: 200 LAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVE-------NPSARI 252
Query: 939 SMEEALK 945
++ + K
Sbjct: 253 TIPDIKK 259
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 99.0 bits (246), Expect = 5e-23
Identities = 38/240 (15%), Positives = 85/240 (35%), Gaps = 15/240 (6%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771
+ T K ++ T +V + I+ + RH+N++ L + + ++++++
Sbjct: 27 TSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGL 86
Query: 772 NLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828
++ E+I T + V V L FLH I H D++ NI++ +
Sbjct: 87 DIFERINTSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTI 143
Query: 829 AEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNGRLT 885
F QL G + + ++ D++ G ++ +L+ G
Sbjct: 144 KIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINP 202
Query: 886 NAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
+ Q ++ + N + ++ +D R + EAL+
Sbjct: 203 FLAETNQQ-----IIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.1 bits (244), Expect = 5e-23
Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 31/250 (12%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYL 768
T + + K I+ + + +++ I + H N+++LL Y + ++L ++
Sbjct: 34 KETSVLAAAKVID--TKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 91
Query: 769 PNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
G + + + + L +LH I H DLKA NI+F + +
Sbjct: 92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGD 148
Query: 826 PHLAEFGF-KYLTQLAD--GSFPAKIAWTESGEFYNAMKEEMYM----DVYGFGEIILEI 878
LA+FG T+ SF W ++ DV+ G ++E+
Sbjct: 149 IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 208
Query: 879 LTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL---VLDVALLCTRSTPS 935
+ + + + +L + D C
Sbjct: 209 AE-IEPPHHELNPM---------RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVD 258
Query: 936 DRPSMEEALK 945
R + + L+
Sbjct: 259 ARWTTSQLLQ 268
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.7 bits (245), Expect = 5e-23
Identities = 49/250 (19%), Positives = 88/250 (35%), Gaps = 27/250 (10%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
I V++K++ AT K E + +V + ++ RLLG C L+ +P
Sbjct: 37 VKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPF 94
Query: 771 GNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
G L + +R + + +A+G+ +L + H DL A N++
Sbjct: 95 GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVK 151
Query: 828 LAEFGFKYLTQLADGSFPAK-----IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 882
+ +FG L + + A+ I W + E DV+ +G + E++T G
Sbjct: 152 ITDFGLAKLLGAEEKEYHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFG 210
Query: 883 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTPSDRPSME 941
G E+ + E G V + + C RP
Sbjct: 211 SKPYDGIPAS---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 261
Query: 942 EALKLLSGLK 951
E + S +
Sbjct: 262 ELIIEFSKMA 271
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 98.3 bits (243), Expect = 7e-23
Identities = 64/269 (23%), Positives = 100/269 (37%), Gaps = 4/269 (1%)
Query: 360 NLGRNSKLRWVDVSTNNFNG--SIPPDICSGGVLFKLILFSN-NFTGSLSPSLSNCSSLV 416
+ ++ +D+S N IP + + L L + N G + P+++ + L
Sbjct: 45 TDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLH 104
Query: 417 RLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGG 476
L + + SG IP SQ+ + +D S N +G +P I+ L N + G
Sbjct: 105 YLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR-ISG 163
Query: 477 MIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELE 536
IP S L + N P N+ + +
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNT 223
Query: 537 RIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGS 596
+ + + L LDL +N + G +P L LNVSFN++ G
Sbjct: 224 QKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283
Query: 597 IPSGKVLRLMGSSAYAGNPKLCGAPLQPC 625
IP G L+ SAYA N LCG+PL C
Sbjct: 284 IPQGGNLQRFDVSAYANNKCLCGSPLPAC 312
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 96.4 bits (238), Expect = 3e-22
Identities = 67/333 (20%), Positives = 116/333 (34%), Gaps = 36/333 (10%)
Query: 29 EALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLS 88
+ALL +K +L + +L W P + +W GV C+ +
Sbjct: 9 QALLQIKKDLGNP-TTLSSW--LPTTDCCN----RTWLGVLCDTDTQTYR---------- 51
Query: 89 GALPGKPLRIFFNELVDLNLSHNSFSGQFPV--EIFNLTSLISLDISRN-NFSGHFPGGI 145
+ +L+LS + +P+ + NL L L I N G P I
Sbjct: 52 --------------VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAI 97
Query: 146 QSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205
L L L + SG++P +SQ++ L L+ + + SG +P S +L +
Sbjct: 98 AKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157
Query: 206 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKEL 265
GN ++ IP G + + ++D++ L
Sbjct: 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNM-LEGDASVL 216
Query: 266 SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325
K + L LDL +NR+ G +P+ LK L L++
Sbjct: 217 FGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVS 276
Query: 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLP 358
+N + G +P+ L ++ NN P
Sbjct: 277 FNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 60.9 bits (146), Expect = 2e-10
Identities = 51/264 (19%), Positives = 91/264 (34%), Gaps = 5/264 (1%)
Query: 266 SNLTKLESLFLFRNQLAG--QVPWEFSRVTTLKSLDLSDN-RLSGPIPESFADLKNLRLL 322
+ ++ +L L L +P + + L L + L GPIP + A L L L
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 323 SLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIP 382
+ + +SG +P+ L Q+ +L L N SG+LP ++ L + N +G+IP
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 383 PDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYI 442
S LF + S N + + + +
Sbjct: 167 DSYGSFSKLFTSMTISRNRLTG-KIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQK 225
Query: 443 DLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNL 502
+ + L ++ NN ++ G +P L L + + S N+ G +
Sbjct: 226 IHLAKNSLAFDLGKVGLSKNLNGLDLRNN-RIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284
Query: 503 PPFKSCKSISVIESHMNNLSGTIP 526
P + + V N P
Sbjct: 285 PQGGNLQRFDVSAYANNKCLCGSP 308
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.6 bits (240), Expect = 9e-23
Identities = 41/238 (17%), Positives = 89/238 (37%), Gaps = 19/238 (7%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
+ +++K + V + R +RH N++RL G+ ++ + YL+ +Y P
Sbjct: 30 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 89
Query: 770 NGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
G + +++ D + +A L + H + H D+K N++ E
Sbjct: 90 LGTVYRELQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELK 146
Query: 828 LAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 887
+A+FG+ + + E + +D++ G + E L G+
Sbjct: 147 IADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV-GKPPFE 205
Query: 888 GSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
++ Q + + E + + + D+ + PS RP + E L+
Sbjct: 206 ANTYQE------TYKRISRVEFTFPDFVTEGAR---DLISRLLKHNPSQRPMLREVLE 254
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 97.0 bits (240), Expect = 2e-22
Identities = 50/280 (17%), Positives = 96/280 (34%), Gaps = 13/280 (4%)
Query: 293 TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNY 352
LDL +N+++ F +LKNL L L+ N++S P + L LE L++ N
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 353 FSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNC 412
LPE + + + V + + + ++ +L +G + +
Sbjct: 91 LK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM 149
Query: 413 SSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNP 472
L +R+ D + + + P + + L N T + + L +S N
Sbjct: 150 KKLSYIRIADTNIT---TIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 206
Query: 473 KLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSG------TIP 526
+ + P L+ + + K I V+ H NN+S P
Sbjct: 207 ISAVDNGSLANT-PHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPP 265
Query: 527 ESVSNCVELERIDLANNKL--IGSIPEVLARLPVLGVLDL 564
+ + L +N + P + V + L
Sbjct: 266 GYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 87.0 bits (214), Expect = 4e-19
Identities = 60/321 (18%), Positives = 99/321 (30%), Gaps = 28/321 (8%)
Query: 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185
L + S P + + +LD +N + + L++L L L +
Sbjct: 11 HLRVVQCSDLGLE-KVPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKI 67
Query: 186 SGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMS 245
S P F LE L+L+ N L + +P ++ + + N
Sbjct: 68 SKISPGAFAPLVKLERLYLSKNQLKE-LPEKMPKTLQELRVHENEITKVRKSVFNGLNQM 126
Query: 246 EVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL 305
V L SG + KL + + + L L L N++
Sbjct: 127 IVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPS---LTELHLDGNKI 183
Query: 306 SGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS 365
+ S L NL L L +N +S SL P L L + NN P L +
Sbjct: 184 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKV-PGGLADHK 242
Query: 366 KLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDN-- 423
++ V + NN + D C G + +S + L N
Sbjct: 243 YIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKASYSGVSLFSNPV 284
Query: 424 SFSGEIPLKFSQLPDINYIDL 444
+ P F + + L
Sbjct: 285 QYWEIQPSTFRCVYVRAAVQL 305
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 86.6 bits (213), Expect = 6e-19
Identities = 53/295 (17%), Positives = 98/295 (33%), Gaps = 28/295 (9%)
Query: 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF 122
C V+C+ V +L + L+L +N + +
Sbjct: 10 CHLRVVQCSDLGLEKVPKDLP-----------------PDTALLDLQNNKITEIKDGDFK 52
Query: 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182
NL +L +L + N S PG L L L N L+ L+V
Sbjct: 53 NLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEI 112
Query: 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG 242
+ + + +E L + +K ++++ I IP G
Sbjct: 113 TKVRKSVFNGLNQMIVVE-LGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ--G 168
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
+ L + G ++ L L L L L N ++ + L+ L L++
Sbjct: 169 LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNN 228
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSG------TVPESLVQLPSLEILFIWNN 351
N+L +P AD K ++++ L N +S P + S + +++N
Sbjct: 229 NKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSN 282
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 73.9 bits (180), Expect = 9e-15
Identities = 41/214 (19%), Positives = 75/214 (35%), Gaps = 4/214 (1%)
Query: 413 SSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNP 472
L L++N + F L +++ + L N + P KLE +S N
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN- 89
Query: 473 KLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNC 532
+L + +L L+ + ++ + + + ++ SG +
Sbjct: 90 QLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM 149
Query: 533 VELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFND 592
+L I +A+ + +IP+ L P L L L N ++ A ++L L +SFN
Sbjct: 150 KKLSYIRIADTNI-TTIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 206
Query: 593 ISGSIPSGKVLRLMGSSAYAGNPKLCGAPLQPCH 626
IS + N KL P
Sbjct: 207 ISAVDNGSLANTPHLRELHLNNNKLVKVPGGLAD 240
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 47.0 bits (110), Expect = 5e-06
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 524 TIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSL 583
+P+ + + +DL NNK+ L L L L +N +S P F L
Sbjct: 24 KVPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 81
Query: 584 TVLNVSFNDISGSIPSG 600
L +S N + +P
Sbjct: 82 ERLYLSKNQLK-ELPEK 97
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.9 bits (240), Expect = 2e-22
Identities = 58/265 (21%), Positives = 95/265 (35%), Gaps = 36/265 (13%)
Query: 712 LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCY-NRHQAYLLYDY 767
T TV+VK ++ GAT ++SE I H N++ LLG C ++ ++
Sbjct: 40 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 99
Query: 768 LPNGNLSEKIRTKR------------------DWAAKYKIVLGVARGLCFLHHDCYPAIP 809
GNLS +R+KR VA+G+ FL
Sbjct: 100 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCI 156
Query: 810 HGDLKASNIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEMY--- 865
H DL A NI+ E + +FG + + + D + + +Y
Sbjct: 157 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 216
Query: 866 MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925
DV+ FG ++ EI + G G + + + + + E+
Sbjct: 217 SDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMRAPDYTTPEMY---QT 269
Query: 926 ALLCTRSTPSDRPSMEEALKLLSGL 950
L C PS RP+ E ++ L L
Sbjct: 270 MLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.8 bits (238), Expect = 2e-22
Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 33/249 (13%)
Query: 714 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCY----NRHQAYLLYD 766
T + V+ +++ F ++H N++R + L+ +
Sbjct: 33 TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 92
Query: 767 YLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI-VFDEN 823
+ +G L ++ + + +GL FLH P I H DLK NI +
Sbjct: 93 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPP-IIHRDLKCDNIFITGPT 151
Query: 824 MEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM-------DVYGFGEIIL 876
+ + G L L SF + T M EMY DVY FG +L
Sbjct: 152 GSVKIGDLG---LATLKRASFAKAVIGT-----PEFMAPEMYEEKYDESVDVYAFGMCML 203
Query: 877 EILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSD 936
E+ T + + + + + + E+K ++ C R +
Sbjct: 204 EMAT-SEYPYSECQNAAQIYRRVTSGVKPASFDKVAI---PEVK---EIIEGCIRQNKDE 256
Query: 937 RPSMEEALK 945
R S+++ L
Sbjct: 257 RYSIKDLLN 265
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 94.8 bits (235), Expect = 6e-22
Identities = 53/254 (20%), Positives = 88/254 (34%), Gaps = 29/254 (11%)
Query: 712 LPTGITVSVKKIEWGATRI-------KIVSEFITRIGTVR----HKNLIRLLGFCYNRHQ 760
PT +VK I+ ++ + + +R H N+I+L
Sbjct: 25 KPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF 84
Query: 761 AYLLYDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 818
+L++D + G L + + K KI+ + +C LH I H DLK NI
Sbjct: 85 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENI 141
Query: 819 VFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGF 871
+ D++M L +FGF + L ++ E N +D++
Sbjct: 142 LLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 201
Query: 872 GEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTR 931
G I+ +L G +L + + N S D V D+
Sbjct: 202 GVIMYTLLA-GSPPFWHRKQML-----MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLV 255
Query: 932 STPSDRPSMEEALK 945
P R + EEAL
Sbjct: 256 VQPQKRYTAEEALA 269
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 95.9 bits (238), Expect = 8e-22
Identities = 47/244 (19%), Positives = 88/244 (36%), Gaps = 22/244 (9%)
Query: 712 LPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769
TG K I + + + +E I+ + + H LI L ++++ L+ ++L
Sbjct: 51 KATGRVFVAKFINTPYPLDKYTVKNE-ISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS 109
Query: 770 NGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826
G L ++I + A + GL +H +I H D+K NI+ +
Sbjct: 110 GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKAS 166
Query: 827 HLAEFGFKYLTQLADGSFPAKIAWT---ESGEFYNAMKEEMYMDVYGFGEIILEILTNGR 883
+ F T+L T + E + Y D++ G + +L+ G
Sbjct: 167 SVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS-GL 225
Query: 884 LTNAGSSLQN--KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 941
AG + + E + S +D IK +L P R ++
Sbjct: 226 SPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQK-------EPRKRLTVH 278
Query: 942 EALK 945
+AL+
Sbjct: 279 DALE 282
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.7 bits (235), Expect = 8e-22
Identities = 42/239 (17%), Positives = 94/239 (39%), Gaps = 16/239 (6%)
Query: 712 LPTGITVSVKKIEWG-ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770
+ TG V+++++ + +++ I + ++ N++ L + +++ +YL
Sbjct: 42 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 771 GNLSEKI-RTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829
G+L++ + T D + + L FLH + + H D+K+ NI+ + L
Sbjct: 102 GSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLT 158
Query: 830 EFGF--KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 887
+FGF + + + S + + E +D++ G + +E++ G
Sbjct: 159 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYL 217
Query: 888 GSSLQNKPIDGLLGEMYNEN-EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
+ P+ L N E+ + L + D C R S +E L+
Sbjct: 218 NEN----PLRALYLIATNGTPELQNPEKLSAIFR---DFLNRCLDMDVEKRGSAKELLQ 269
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.8 bits (225), Expect = 1e-20
Identities = 46/252 (18%), Positives = 81/252 (32%), Gaps = 24/252 (9%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAYLLYDY 767
L T ++K +E + ++TR + + H ++L + + Y Y
Sbjct: 30 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 89
Query: 768 LPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
NG L + IR D + L +LH I H DLK NI+ +E+M
Sbjct: 90 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMH 146
Query: 826 PHLAEFGFKYLTQLADGSFPAKIAWTESG----EFYNAMKEEMYMDVYGFGEIILEILTN 881
+ +FG + A + E D++ G II +++
Sbjct: 147 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA- 205
Query: 882 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 941
G + L+ + + E + + D+ + R E
Sbjct: 206 GLPPFRAGNEY------LIFQKIIKLEYDFPEKFFPKAR---DLVEKLLVLDATKRLGCE 256
Query: 942 EALKLLSGLKPH 953
E LK H
Sbjct: 257 EMEG-YGPLKAH 267
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.3 bits (217), Expect = 1e-19
Identities = 58/265 (21%), Positives = 96/265 (36%), Gaps = 7/265 (2%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
+VP I + + L G+ S + F + ++L L L N+L A L +
Sbjct: 25 AVPVGIPA--ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 224 THMEIGYNFYQGNI-PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282
+++ N ++ P + + L + L P L L+ L+L N L
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342
F + L L L NR+S +F L +L L L N ++ P + L
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 202
Query: 343 LEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402
L L+++ N S E L L+++ ++ N + L K S+
Sbjct: 203 LMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLW-AWLQKFRGSSSEVP 261
Query: 403 GSLSPSLSNCSSLVRLRLEDNSFSG 427
SL L+ RL N G
Sbjct: 262 CSLPQRLAGRDL---KRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.5 bits (189), Expect = 4e-16
Identities = 59/280 (21%), Positives = 104/280 (37%), Gaps = 8/280 (2%)
Query: 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
V + PV I + + + N S ++ RNL +L SN
Sbjct: 11 EPKVTTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNV 67
Query: 161 FSGSVPAEISQLEHLKVLNLAGSYFSGPI-PSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ A + L L+ L+L+ + + P+ F L LHL L + P
Sbjct: 68 LARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRG 127
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L + ++ + N Q ++ + +L + G +S + L L+ L L +N
Sbjct: 128 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQN 187
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
++A P F + L +L L N LS E+ A L+ L+ L L N +
Sbjct: 188 RVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD-CRARPL 246
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379
L+ ++ SLP+ L + ++ N+ G
Sbjct: 247 WAWLQKFRGSSSEVPCSLPQRL---AGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.4 bits (186), Expect = 9e-16
Identities = 46/304 (15%), Positives = 83/304 (27%), Gaps = 53/304 (17%)
Query: 293 TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNY 352
+ + L NR+S SF +NL +L L N ++ + L LE L + +N
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 353 FSGSL-PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSN 411
S+ P +L + + P L L L N + +
Sbjct: 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD 151
Query: 412 CSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNN 471
+L L L N S F L ++ + L +N P +L + N
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211
Query: 472 PKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSN 531
A +
Sbjct: 212 NLSALPTEAL------------------------------------------------AP 223
Query: 532 CVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFN 591
L+ + L +N + L S + + +P + + + ++ N
Sbjct: 224 LRALQYLRLNDNPWVCDCR-ARPLWAWLQKFRGSSSEVPCSLPQRL---AGRDLKRLAAN 279
Query: 592 DISG 595
D+ G
Sbjct: 280 DLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.8 bits (182), Expect = 4e-15
Identities = 51/267 (19%), Positives = 92/267 (34%), Gaps = 28/267 (10%)
Query: 189 IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ 248
+P + + + + L GN ++ A + +T + + N ++ ++
Sbjct: 26 VPVGIPA--ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 249 YLDIAGANLSGSI-PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307
LD++ S+ P L +L +L L R L P F + L+ L L DN L
Sbjct: 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 143
Query: 308 PIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKL 367
++F DL NL L L N +S + L SL+ L + N + P +L
Sbjct: 144 LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRL 203
Query: 368 RWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSG 427
+ + NN + + +L LRL DN +
Sbjct: 204 MTLYLFANNLSALPTEALA------------------------PLRALQYLRLNDNPWVC 239
Query: 428 EIPLKFSQLPDINYIDLSRNGFTGGIP 454
+ + + S + +P
Sbjct: 240 DCRAR-PLWAWLQKFRGSSSEVPCSLP 265
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.4 bits (142), Expect = 5e-10
Identities = 48/246 (19%), Positives = 89/246 (36%), Gaps = 6/246 (2%)
Query: 356 SLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSL 415
++P + + + + N + + L L L SN + + + + L
Sbjct: 25 AVPVGIPAA--SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 416 VRLRLEDNSFSGEI-PLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKL 474
+L L DN+ + P F L ++ + L R G P + L+Y + +N L
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN-AL 141
Query: 475 GGMIPAQTWSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCV 533
+ L +L + I+ F+ S+ + H N ++ P + +
Sbjct: 142 QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 201
Query: 534 ELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDI 593
L + L N L E LA L L L L+ N A+ + L S +++
Sbjct: 202 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEV 260
Query: 594 SGSIPS 599
S+P
Sbjct: 261 PCSLPQ 266
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.7 bits (135), Expect = 4e-09
Identities = 38/214 (17%), Positives = 68/214 (31%), Gaps = 2/214 (0%)
Query: 413 SSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNP 472
++ R+ L N S F ++ + L N + LE ++S+N
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 473 KLGGMIPAQTWSLPSLQNFSASACNITG-NLPPFKSCKSISVIESHMNNLSGTIPESVSN 531
+L + PA L L C + F+ ++ + N L ++ +
Sbjct: 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD 151
Query: 532 CVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFN 591
L + L N++ L L L L N ++ P F L L + N
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211
Query: 592 DISGSIPSGKVLRLMGSSAY-AGNPKLCGAPLQP 624
++S NP +C +P
Sbjct: 212 NLSALPTEALAPLRALQYLRLNDNPWVCDCRARP 245
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.9 bits (112), Expect = 3e-06
Identities = 29/161 (18%), Positives = 49/161 (30%), Gaps = 4/161 (2%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
L L L N+ +L +L L + N S + L +L L
Sbjct: 127 GLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQ 186
Query: 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
N + P L L L L + S ++L++L L N A
Sbjct: 187 NRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RP 245
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259
+ + + ++P +L +A +L G
Sbjct: 246 LWAWLQKFRGSSSEVPCSLPQRLAGRD---LKRLAANDLQG 283
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 88.6 bits (219), Expect = 2e-19
Identities = 33/249 (13%), Positives = 80/249 (32%), Gaps = 25/249 (10%)
Query: 712 LPTGITVSVKKI-------EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764
TG ++K + + G T ++ + T ++ + + + +
Sbjct: 26 ADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 85
Query: 765 YDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
D + G+L + A + GL +H+ + + DLK +NI+ DE
Sbjct: 86 LDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDE 142
Query: 823 NMEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN 881
+ +++ G ++ + + + + D + G ++ ++L
Sbjct: 143 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 202
Query: 882 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSM- 940
+ ID + M E S L+ ++ +L + R
Sbjct: 203 HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR-------DVNRRLGCL 255
Query: 941 ----EEALK 945
+E +
Sbjct: 256 GRGAQEVKE 264
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 85.3 bits (210), Expect = 1e-18
Identities = 46/266 (17%), Positives = 96/266 (36%), Gaps = 32/266 (12%)
Query: 708 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLL 764
KA G T ++KKI I S I I ++H N+++L + + + L+
Sbjct: 19 YKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLV 78
Query: 765 YDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
+++L + + +L + G+ + H + H DLK N++ +
Sbjct: 79 FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINR 135
Query: 823 NMEPHLAEFGFKYLTQLADGSFPAKIAWT---ESGEFYNAMKEEMYMDVYGFGEIILEIL 879
E +A+FG + + +I + K +D++ G I E++
Sbjct: 136 EGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
Query: 880 TNGRLTNAGSSLQN--KPIDGLLGEMYNENEVGSSSSLQDEIKL---------------- 921
G G S + I +LG ++N + + +
Sbjct: 196 N-GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLD 254
Query: 922 --VLDVALLCTRSTPSDRPSMEEALK 945
+D+ + P+ R + ++AL+
Sbjct: 255 ESGIDLLSKMLKLDPNQRITAKQALE 280
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.8 bits (209), Expect = 3e-18
Identities = 44/243 (18%), Positives = 81/243 (33%), Gaps = 22/243 (9%)
Query: 712 LPTGITVSVKKIEWGATRIK-----IVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766
T ++K ++ + + E H L + + + + +
Sbjct: 24 KKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME 83
Query: 767 YLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM 824
YL G+L I++ D + + GL FLH I + DLK NI+ D++
Sbjct: 84 YLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDG 140
Query: 825 EPHLAEFGFKYLTQLADGSFPAKI--AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 882
+A+FG L D + E K +D + FG ++ E+L G
Sbjct: 141 HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI-G 199
Query: 883 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEE 942
+ G + L + L+ E K D+ + P R +
Sbjct: 200 QSPFHGQDEEE------LFHSIRMDNPFYPRWLEKEAK---DLLVKLFVREPEKRLGVRG 250
Query: 943 ALK 945
++
Sbjct: 251 DIR 253
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.8 bits (206), Expect = 3e-18
Identities = 46/260 (17%), Positives = 89/260 (34%), Gaps = 27/260 (10%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYL 768
T V++K++ + S + I ++HKN++RL ++ + L++++
Sbjct: 24 RETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83
Query: 769 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828
D + + + + L L + H DLK N++ + N E L
Sbjct: 84 DQDLKKYFDSCNGDLDPE-IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKL 142
Query: 829 AEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNGRLT 885
A FG + + A++ ++Y +D++ G I E+ GR
Sbjct: 143 ANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
Query: 886 NAGSSLQN----------KPIDGLLGEMYNENEVGSSSSLQDEIKLV----------LDV 925
G+ + + P + M + LV D+
Sbjct: 203 FPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDL 262
Query: 926 ALLCTRSTPSDRPSMEEALK 945
+ P R S EEAL+
Sbjct: 263 LQNLLKCNPVQRISAEEALQ 282
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.4 bits (208), Expect = 4e-18
Identities = 35/247 (14%), Positives = 86/247 (34%), Gaps = 22/247 (8%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA----YLLYDY 767
T ++K ++ K E + +++R++ N + ++ +
Sbjct: 34 KRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC 90
Query: 768 LPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 823
L G L +I+ + +I+ + + +LH I H D+K N+++
Sbjct: 91 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK 147
Query: 824 MEPHLAEFG-FKYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEIL 879
+ + F + + + +T + E K + D++ G I+ +L
Sbjct: 148 RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 207
Query: 880 TNGRLTNAGSSLQNKP-IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP 938
+ L P + + E S + +E+K + ++ P+ R
Sbjct: 208 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK---MLIRNLLKTEPTQRM 264
Query: 939 SMEEALK 945
++ E +
Sbjct: 265 TITEFMN 271
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.3 bits (205), Expect = 5e-18
Identities = 48/249 (19%), Positives = 97/249 (38%), Gaps = 25/249 (10%)
Query: 712 LPTGITVSVKKI--------EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763
TG+ + K I G +R I E ++ + ++H N+I L N+ L
Sbjct: 32 KSTGLQYAAKFIKKRRTKSSRRGVSREDIERE-VSILKEIQHPNVITLHEVYENKTDVIL 90
Query: 764 LYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 823
+ + + G L + + K + + + L +++ I H DLK NI+ +
Sbjct: 91 ILELVAGGELFDFLAEKESLTEEEATEF-LKQILNGVYYLHSLQIAHFDLKPENIMLLDR 149
Query: 824 --MEPHLAEFGFKYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEI 878
+P + F ++ G+ I T + E N + D++ G I +
Sbjct: 150 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 209
Query: 879 LTNGRLTNAGSSLQN--KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSD 936
L+ G G + Q + + E +E +S+ +D I+ +L P
Sbjct: 210 LS-GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK-------DPKK 261
Query: 937 RPSMEEALK 945
R +++++L+
Sbjct: 262 RMTIQDSLQ 270
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 82.0 bits (202), Expect = 2e-17
Identities = 41/242 (16%), Positives = 78/242 (32%), Gaps = 17/242 (7%)
Query: 712 LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768
T V++K I A + +E I + ++H N++ L + YL+ +
Sbjct: 31 KRTQKLVAIKCIAKKALEGKEGSMENE-IAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 89
Query: 769 PNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826
G L ++I K +++ V + +LH DE+ +
Sbjct: 90 SGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKI 149
Query: 827 HLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNGR 883
+++FG GS + T + ++ Y +D + G I +L G
Sbjct: 150 MISDFGL--SKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC-GY 206
Query: 884 LTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 943
+ L ++ S D D P R + E+A
Sbjct: 207 PPFYDENDAK-----LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQA 261
Query: 944 LK 945
L+
Sbjct: 262 LQ 263
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 82.1 bits (202), Expect = 2e-17
Identities = 43/238 (18%), Positives = 85/238 (35%), Gaps = 11/238 (4%)
Query: 712 LPTGITVSVKKIE-WGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDY 767
G ++K ++ R+K V V H +IR+ G + Q +++ DY
Sbjct: 26 RHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY 85
Query: 768 LPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
+ G L +R + + A L + I + DLK NI+ D+N
Sbjct: 86 IEGGELFSLLRKSQRFPNPVAKFY-AAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIK 144
Query: 828 LAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 887
+ +FGF + + + E + +D + FG +I E+L G
Sbjct: 145 ITDFGFAKYVPDVTYTLCGTPDYI-APEVVSTKPYNKSIDWWSFGILIYEMLA-GYTPFY 202
Query: 888 GSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
S+ L E+ + ++D + ++ L ++ + + E+
Sbjct: 203 DSNTMKTYEKILNAELRFPPFF--NEDVKDLLSRLITRDL--SQRLGNLQNGTEDVKN 256
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 78.2 bits (192), Expect = 2e-16
Identities = 42/249 (16%), Positives = 82/249 (32%), Gaps = 24/249 (9%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQA----YL 763
L V+VK + R R + H ++ + A Y+
Sbjct: 29 LRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 88
Query: 764 LYDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821
+ +Y+ L + + T+ +++ + L F H + I H D+K +NI+
Sbjct: 89 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMIS 145
Query: 822 ENMEPHLAEFGF-----KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIIL 876
+ +FG + + A S E + DVY G ++
Sbjct: 146 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 205
Query: 877 EILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSD 936
E+LT G G S + + + E+ + S+ + + V L P +
Sbjct: 206 EVLT-GEPPFTGDSPVS-----VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPEN 259
Query: 937 RPSMEEALK 945
R ++
Sbjct: 260 RYQTAAEMR 268
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.7 bits (193), Expect = 4e-16
Identities = 48/276 (17%), Positives = 93/276 (33%), Gaps = 44/276 (15%)
Query: 708 CKAV-LPTGITVSVKKI---EWGATRIKIVSEFITRIGTVRHKNLIRLLGFC----YNRH 759
C A + V++KKI E + + E I + RH+N+I + +
Sbjct: 25 CSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDIIRAPTIEQM 83
Query: 760 QAYLLYDYLPNGNLSEKIRTKR-DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 818
+ L +L +L + ++T+ + + RGL ++H + H DLK SN+
Sbjct: 84 KDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNL 140
Query: 819 VFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM--------DVYG 870
+ + + + +FG + E M D++
Sbjct: 141 LLNTTCDLKICDFGLA--RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 198
Query: 871 FGEIILEILTNGRLTNAGS---------------------SLQNKPIDGLLGEMYNENEV 909
G I+ E+L+N + + N L + ++N+V
Sbjct: 199 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 258
Query: 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
+ + LD+ P R +E+AL
Sbjct: 259 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.2 bits (189), Expect = 6e-16
Identities = 52/261 (19%), Positives = 92/261 (35%), Gaps = 32/261 (12%)
Query: 714 TGITVSVKKIEWG---ATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDY 767
T V++KKI+ G + I + I + H N+I LL ++ L++D+
Sbjct: 22 TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81
Query: 768 LPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
+ + +L +GL +LH I H DLK +N++ DEN
Sbjct: 82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGV 138
Query: 826 PHLAEFGF--KYLTQLADGSFPAKIAWTESGEFYNAMKEEMY-MDVYGFGEIILEILTNG 882
LA+FG + + + W + E + +D++ G I+ E+L
Sbjct: 139 LKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 198
Query: 883 RLTNAGSSLQ---------NKPIDGLLGEMYNENEVGSSSSLQDEI---------KLVLD 924
S L P + +M + + + S +LD
Sbjct: 199 PFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLD 258
Query: 925 VALLCTRSTPSDRPSMEEALK 945
+ P R + +ALK
Sbjct: 259 LIQGLFLFNPCARITATQALK 279
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.5 bits (187), Expect = 1e-15
Identities = 45/270 (16%), Positives = 88/270 (32%), Gaps = 35/270 (12%)
Query: 708 CKAVLPTGITVSVKKIEWGATRIKIVSEFIT------RIGTVRHKNLIRLLGFCYNRHQA 761
+ + G V++K++ + I + T H N++RL C
Sbjct: 26 ARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 85
Query: 762 -----YLLYDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 813
L+++++ + + ++ + RGL FLH + H DL
Sbjct: 86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDL 142
Query: 814 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKI-AWTESGEFYNAMKEEMYMDVYGFG 872
K NI+ + + LA+FG + + W + E +D++ G
Sbjct: 143 KPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 202
Query: 873 EIILEILTNGRLTNAGSSLQ-----------------NKPIDGLLGEMYNENEVGSSSSL 915
I E+ L S + + + ++++ +
Sbjct: 203 CIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFV 262
Query: 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
D +L D+ L C P+ R S AL
Sbjct: 263 TDIDELGKDLLLKCLTFNPAKRISAYSALS 292
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 73.7 bits (180), Expect = 9e-15
Identities = 27/252 (10%), Positives = 64/252 (25%), Gaps = 23/252 (9%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771
+ G V++K ++ E ++ I + +C ++ L
Sbjct: 29 IAAGEEVAIKLECVKTKHPQLHIE-SKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGP 87
Query: 772 NLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF-DENMEPH 827
+L + + + + ++H H D+K N +
Sbjct: 88 SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNL 144
Query: 828 LAEFGFKYLTQLADGSFPAKIAWTESG-----------EFYNAMKEEMYMDVYGFGEIIL 876
+ F + D I + E+ + +++ D+ G +++
Sbjct: 145 VYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 204
Query: 877 EILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTPS 935
G L L+ + + L C
Sbjct: 205 YFNL-GSLPW--QGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFD 261
Query: 936 DRPSMEEALKLL 947
D+P +L
Sbjct: 262 DKPDYSYLRQLF 273
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.1 bits (181), Expect = 1e-14
Identities = 47/271 (17%), Positives = 89/271 (32%), Gaps = 47/271 (17%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQA------ 761
+G V++KK+ F R + + H N++RL F Y+ +
Sbjct: 42 CDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 94
Query: 762 YLLYDYLPNGNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKAS 816
L+ DY+P R + + R L ++H I H D+K
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQ 151
Query: 817 NIVFDENMEPH-LAEFGF--KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGE 873
N++ D + L +FG + + + S+ + + A +DV+ G
Sbjct: 152 NLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 211
Query: 874 IILEILTNGRLTNAGSSL-QNKPIDGLLGEMYNENEVGSSSSLQDEI------------- 919
++ E+L + S + Q I +LG E + + +
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVF 271
Query: 920 -----KLVLDVALLCTRSTPSDRPSMEEALK 945
+ + TP+ R + EA
Sbjct: 272 RPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.4 bits (179), Expect = 2e-14
Identities = 47/277 (16%), Positives = 95/277 (34%), Gaps = 47/277 (16%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCY--------NRHQ 760
TG V++KK+ + + I ++H+N++ L+ C +
Sbjct: 32 RKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGS 91
Query: 761 AYLLYDYLPNGNLSEKI--RTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 818
YL++D+ + K + +++ + GL ++H + I H D+KA+N+
Sbjct: 92 IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANV 148
Query: 819 VFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY--------MDVYG 870
+ + LA+FG LA S P + E + +D++G
Sbjct: 149 LITRDGVLKLADFGLARAFSLAKNSQP-NRYTNRVVTLWYRPPELLLGERDYGPPIDLWG 207
Query: 871 FGEIILEILTNGRLTNAGSSLQ--NKPIDGLLGEMYNENEVGSSSSLQDEIKLV------ 922
G I+ E+ T + + + L ++++LV
Sbjct: 208 AGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRK 267
Query: 923 --------------LDVALLCTRSTPSDRPSMEEALK 945
LD+ P+ R ++AL
Sbjct: 268 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 304
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.8 bits (175), Expect = 4e-14
Identities = 47/262 (17%), Positives = 86/262 (32%), Gaps = 31/262 (11%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYL 768
TG V++KKI + S I I + H N+++LL + ++ YL++++L
Sbjct: 24 KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 83
Query: 769 PNGNLS---EKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
T + + +GL F H + H DLK N++ +
Sbjct: 84 HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA 140
Query: 826 PHLAEFGF--KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM-DVYGFGEIILEILTNG 882
LA+FG + + + W + E K D++ G I E++T
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 883 RLTNAGSSLQ---------NKPIDGLLGEMYNENEVGSSSSLQDEIKL----------VL 923
L S + P + + + + + S
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 260
Query: 924 DVALLCTRSTPSDRPSMEEALK 945
+ P+ R S + AL
Sbjct: 261 SLLSQMLHYDPNKRISAKAALA 282
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.2 bits (176), Expect = 5e-14
Identities = 47/269 (17%), Positives = 86/269 (31%), Gaps = 34/269 (12%)
Query: 708 CKAV-LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQA-- 761
C AV TG V++KK+ + +RH+N+I LL
Sbjct: 35 CSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 94
Query: 762 ----YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASN 817
YL+ ++ K +V + +GL ++H H DLK N
Sbjct: 95 FTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII---HRDLKPGN 151
Query: 818 IVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILE 877
+ +E+ E + +FG + + N M+ +D++ G I+ E
Sbjct: 152 LAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE 211
Query: 878 ILTNGRLTNAGS---------------------SLQNKPIDGLLGEMYNENEVGSSSSLQ 916
++T L LQ+ + + + +S L
Sbjct: 212 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILT 271
Query: 917 DEIKLVLDVALLCTRSTPSDRPSMEEALK 945
+ L +++ R + EAL
Sbjct: 272 NASPLAVNLLEKMLVLDAEQRVTAGEALA 300
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.1 bits (173), Expect = 1e-13
Identities = 47/265 (17%), Positives = 93/265 (35%), Gaps = 35/265 (13%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQA-----YL 763
TG+ V+VKK+ I + ++H+N+I LL
Sbjct: 40 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 99
Query: 764 LYDYLPNGNLSEKIRTKR-DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
L +L +L+ ++ ++ ++ + RGL ++H H DLK SN+ +E
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAVNE 156
Query: 823 NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 882
+ E + +FG T + A + N M +D++ G I+ E+LT G
Sbjct: 157 DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-G 215
Query: 883 RLTNAGSS----------------------LQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920
R G+ + ++ + + ++ ++
Sbjct: 216 RTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANP 275
Query: 921 LVLDVALLCTRSTPSDRPSMEEALK 945
L +D+ R + +AL
Sbjct: 276 LAVDLLEKMLVLDSDKRITAAQALA 300
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.7 bits (170), Expect = 1e-13
Identities = 36/248 (14%), Positives = 71/248 (28%), Gaps = 33/248 (13%)
Query: 712 LPTGITVSVKKIE----WGATRIKIVSEFITRIGTVR-----HKNLIRLLGFCYNRHQAY 762
+ + V++K +E + + + ++ +IRLL +
Sbjct: 26 VSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV 85
Query: 763 LLYDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 819
L+ + T+R V + H+ + H D+K NI+
Sbjct: 86 LILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENIL 142
Query: 820 FDEN-MEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILE 877
D N E L +FG L F ++ V+ G ++ +
Sbjct: 143 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 202
Query: 878 ILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR 937
++ + + + E + + C PSDR
Sbjct: 203 MVCGDIPFEHDEEIIRGQVF-------------FRQRVSSECQ---HLIRWCLALRPSDR 246
Query: 938 PSMEEALK 945
P+ EE
Sbjct: 247 PTFEEIQN 254
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 68.3 bits (166), Expect = 8e-13
Identities = 43/273 (15%), Positives = 86/273 (31%), Gaps = 50/273 (18%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYDYLP 769
+ V VK ++ + KI E N+I L + L+++++
Sbjct: 57 ITNNEKVVVKILK-PVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN 115
Query: 770 NGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHL 828
N + + +T D+ + + + + L + H I H D+K N++ D E+ + L
Sbjct: 116 NTDFKQLYQTLTDYDIR-FYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRL 171
Query: 829 AEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM--------DVYGFGEIILEILT 880
++G LA+ P + Y E + D++ G ++ ++
Sbjct: 172 IDWG------LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 225
Query: 881 NGRLTNAGSS--LQNKPIDGLLGEMYNENEVGSSSSLQDEI------------------- 919
G Q I +LG + + + D
Sbjct: 226 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 285
Query: 920 -------KLVLDVALLCTRSTPSDRPSMEEALK 945
LD R R + EA++
Sbjct: 286 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.8 bits (164), Expect = 9e-13
Identities = 42/289 (14%), Positives = 106/289 (36%), Gaps = 26/289 (8%)
Query: 248 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307
Q LD+ G NL + L + + + R+ + + FS ++ +DLS++ +
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQ-GVIAFRCPRSFMDQPLAEHFSP-FRVQHMDLSNSVIEV 60
Query: 308 -PIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIW--NNYFSGSLPENLGRN 364
+ + L+ LSL +S + +L + +L L + + + +L L
Sbjct: 61 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSC 120
Query: 365 SKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNS 424
S+L +++S + ++ +LS N
Sbjct: 121 SRLDELNLSWCFDFTEKHVQVA----------VAHVSETITQLNLSGY--------RKNL 162
Query: 425 FSGEIPLKFSQLPDINYIDLSRN-GFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTW 483
++ + P++ ++DLS + + Q + L++ ++S + +
Sbjct: 163 QKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELG 222
Query: 484 SLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNC 532
+P+L+ G L K +++ ++ + ++ + ++ N
Sbjct: 223 EIPTLKTLQVFGIVPDGTLQLLK--EALPHLQINCSHFTTIARPTIGNK 269
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.8 bits (151), Expect = 4e-11
Identities = 45/268 (16%), Positives = 93/268 (34%), Gaps = 16/268 (5%)
Query: 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG- 187
+LD++ N G + S + ++ + + S ++ ++L+ S
Sbjct: 4 TLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAEHFSPF-RVQHMDLSNSVIEVS 61
Query: 188 PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQ------- 240
+ L+ L L G L+D I L + + + Q
Sbjct: 62 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121
Query: 241 -LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299
L ++ D ++ ++ +T+L +N + R L LD
Sbjct: 122 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 181
Query: 300 LSDNRL-SGPIPESFADLKNLRLLSLMY-NEMSGTVPESLVQLPSLEILFIWNNYFSGSL 357
LSD+ + + F L L+ LSL ++ L ++P+L+ L ++ G+L
Sbjct: 182 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTL 241
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDI 385
L + ++ ++F P I
Sbjct: 242 QLLK---EALPHLQINCSHFTTIARPTI 266
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (133), Expect = 7e-09
Identities = 40/316 (12%), Positives = 96/316 (30%), Gaps = 44/316 (13%)
Query: 273 SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG- 331
+L L L V + + + + P+ E F+ + ++ + L + +
Sbjct: 4 TLDLTGKNLHPDVTGRLLSQGVI-AFRCPRSFMDQPLAEHFSPFR-VQHMDLSNSVIEVS 61
Query: 332 TVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVL 391
T+ L Q L+ L + S + L +NS L +++S +
Sbjct: 62 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSG-------------- 107
Query: 392 FKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTG 451
F+ S L + + + + +N +N
Sbjct: 108 --FSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKS 165
Query: 452 GIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSI 511
+ T + + L + ++S++ L + + L LQ+ S S C
Sbjct: 166 DLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY-------------- 211
Query: 512 SVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSG 571
++ + L+ + + G++ + LP L ++ + +
Sbjct: 212 --------DIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALP---HLQINCSHFTT 260
Query: 572 QIPAKFGSCSSLTVLN 587
G+ + +
Sbjct: 261 IARPTIGNKKNQEIWG 276
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.5 bits (132), Expect = 9e-09
Identities = 34/250 (13%), Positives = 71/250 (28%), Gaps = 18/250 (7%)
Query: 370 VDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGE- 428
+D++ N + + + S GV+ +F + + + L ++
Sbjct: 5 LDLTGKNLHPDVTGRLLSQGVIAFRC--PRSFMDQPLAEHFSPFRVQHMDLSNSVIEVST 62
Query: 429 IPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSL 488
+ SQ + + L + I + + S L N+S S S
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 122
Query: 489 QNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERI---------D 539
+ + + + NLSG + +
Sbjct: 123 LDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDL 182
Query: 540 LANNKLIGSIPEVLARLPVLGVLDLSH-NSLSGQIPAKFGSCSSLTVLNVSFNDISGSIP 598
+ L + +L L L LS + + + G +L L + G +P
Sbjct: 183 SDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTL-----QVFGIVP 237
Query: 599 SGKVLRLMGS 608
G + L +
Sbjct: 238 DGTLQLLKEA 247
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.5 bits (132), Expect = 1e-08
Identities = 35/261 (13%), Positives = 87/261 (33%), Gaps = 16/261 (6%)
Query: 77 VVGINLSMKGLSGALPGKPLRIFFN--ELVDLNLSHNSFSGQFPVEIF-NLTSLISLDIS 133
++ + + +PL F+ + ++LS++ I + L +L +
Sbjct: 20 LLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLE 79
Query: 134 RNNFSGHFPGGIQSLRNLLVLDAF--SNSFSGSVPAEISQLEHLKVLNLAGSYFSG---- 187
S + NL+ L+ S ++ +S L LNL+ +
Sbjct: 80 GLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHV 139
Query: 188 --PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN-IPWQLGNM 244
+ + L NL + + + H+++ + N + +
Sbjct: 140 QVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL 199
Query: 245 SEVQYLDIAGAN-LSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDN 303
+ +Q+L ++ + EL + L++L +F G + L L ++ +
Sbjct: 200 NYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEA---LPHLQINCS 256
Query: 304 RLSGPIPESFADLKNLRLLSL 324
+ + + KN + +
Sbjct: 257 HFTTIARPTIGNKKNQEIWGI 277
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 67.9 bits (165), Expect = 1e-12
Identities = 35/240 (14%), Positives = 82/240 (34%), Gaps = 15/240 (6%)
Query: 712 LPTGITVSVKKIE-WGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDY 767
+G ++K ++ ++K + + V L++L + Y++ +Y
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 768 LPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825
+ G + +R + +LH + + DLK N++ D+
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGY 179
Query: 826 PHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLT 885
+ +FGF + + E + +D + G +I E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWTLCGTPEALAP-EIILSKGYNKAVDWWALGVLIYEMAA-GYPP 237
Query: 886 NAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945
+ G++ + SS L+D ++ +L V L T+ + + + +
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHF--SSDLKDLLRNLLQVDL--TKRFGNLKNGVNDIKN 293
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.2 bits (163), Expect = 2e-12
Identities = 42/253 (16%), Positives = 80/253 (31%), Gaps = 31/253 (12%)
Query: 713 PTGITVSVKKI--EWGATRIKIVSEFITRIGTVR----HKNLIRLLGFCYNRHQAYLLYD 766
TG ++K + + K T + L+ L + +L+ D
Sbjct: 50 DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILD 109
Query: 767 YLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826
Y+ G L + +R+ ++++ + V + L H I + D+K NI+ D N
Sbjct: 110 YINGGELFTHLS-QRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHV 168
Query: 827 HLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM---------DVYGFGEIILE 877
L +FG + + A+ G + + D + G ++ E
Sbjct: 169 VLTDFGLSKEFV----ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE 224
Query: 878 ILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR 937
+LT G +N E+ Q+ L D+ P R
Sbjct: 225 LLT-GASPFTVDGEKN-----SQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 278
Query: 938 PSM-----EEALK 945
+E +
Sbjct: 279 LGCGPRDADEIKE 291
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.5 bits (158), Expect = 3e-12
Identities = 41/209 (19%), Positives = 71/209 (33%), Gaps = 7/209 (3%)
Query: 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323
E+S + + + L +P + L LS+N L + L L+
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 324 LMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPP 383
L E++ + LP L L + +N L +DVS N
Sbjct: 62 LDRAELTKLQVD--GTLPVLGTLDLSHNQLQSLPLLG-QTLPALTVLDVSFNRLTSLPLG 118
Query: 384 DICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYID 443
+ G L +L L N L+ L +L L +N+ + + L +++ +
Sbjct: 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178
Query: 444 LSRNGFTGGIPTDINQASKLEYFNVSNNP 472
L N IP + L + + NP
Sbjct: 179 LQENSLY-TIPKGFFGSHLLPFAFLHGNP 206
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.8 bits (138), Expect = 1e-09
Identities = 34/205 (16%), Positives = 61/205 (29%), Gaps = 25/205 (12%)
Query: 408 SLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFN 467
+S +S + + + + + +P D + LS N + ++L N
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 468 VSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLP---------------------PFK 506
+ + L +L ++ +
Sbjct: 62 LDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALR 121
Query: 507 SCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSH 566
+ + N L P ++ +LE++ LANN L +L L L L L
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQE 181
Query: 567 NSLSGQIPAKFGSCSSLTVLNVSFN 591
NSL IP F L + N
Sbjct: 182 NSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.4 bits (137), Expect = 2e-09
Identities = 33/206 (16%), Positives = 63/206 (30%), Gaps = 7/206 (3%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
+++N + + P ++ L +S N + L L+ +
Sbjct: 9 VASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNL--D 63
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ L L L+L+ + L + + L
Sbjct: 64 RAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLG-ALRG 122
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L + + + N + P L +++ L +A NL+ L+ L L++L L N
Sbjct: 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRL 305
L +P F L L N
Sbjct: 183 SLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (133), Expect = 5e-09
Identities = 30/210 (14%), Positives = 60/210 (28%), Gaps = 11/210 (5%)
Query: 362 GRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLE 421
+ + V+ N ++PPD+ L L N +L + L +L L+
Sbjct: 7 SKVASHLEVNCDKRNLT-ALPPDLPKD--TTILHLSENLLYTFSLATLMPYTRLTQLNLD 63
Query: 422 DNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQ 481
+ + + ++ + + + L+ +P
Sbjct: 64 RAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-----SLPLG 118
Query: 482 TWSLPSLQNFSASACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESVSNCVELERID 539
N LPP + + NNL+ ++ L+ +
Sbjct: 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178
Query: 540 LANNKLIGSIPEVLARLPVLGVLDLSHNSL 569
L N L +IP+ +L L N
Sbjct: 179 LQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.3 bits (129), Expect = 2e-08
Identities = 41/210 (19%), Positives = 69/210 (32%), Gaps = 9/210 (4%)
Query: 72 KNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLD 131
+ +N + L+ ALP + L+LS N + T L L+
Sbjct: 7 SKVASHLEVNCDKRNLT-ALP----PDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 132 ISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPS 191
+ R + G +L S++ S+P L L VL+++ + +
Sbjct: 62 LDRAELTKLQVDGTLP---VLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLG 118
Query: 192 QFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD 251
L+ L+L GN L P L + + + N L + + L
Sbjct: 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178
Query: 252 IAGANLSGSIPKELSNLTKLESLFLFRNQL 281
+ N +IPK L FL N
Sbjct: 179 LQE-NSLYTIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.6 bits (122), Expect = 1e-07
Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 6/189 (3%)
Query: 237 IPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK 296
+P L + L ++ L L T+L L L R + + +
Sbjct: 25 LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAE---LTKLQVDGTLPVL 79
Query: 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGS 356
+ +P L L +L + +N ++ +L L L+ L++ N
Sbjct: 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTL 139
Query: 357 LPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLV 416
P L KL + ++ NN + L L+L N+ ++ L
Sbjct: 140 PPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLP 198
Query: 417 RLRLEDNSF 425
L N +
Sbjct: 199 FAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.4 bits (98), Expect = 1e-04
Identities = 38/259 (14%), Positives = 69/259 (26%), Gaps = 55/259 (21%)
Query: 288 EFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILF 347
E S+V + ++ L+ +P K+ +L L N + +L+ L L
Sbjct: 5 EVSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 348 IWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSP 407
+ + + + ++N S+P + L L + N T
Sbjct: 62 LDRAELT---KLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLG 118
Query: 408 SLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFN 467
+L L L L+ N P + P + + L+ N T +N L+
Sbjct: 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178
Query: 468 VSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPE 527
+ N TIP+
Sbjct: 179 LQENS-------------------------------------------------LYTIPK 189
Query: 528 SVSNCVELERIDLANNKLI 546
L L N +
Sbjct: 190 GFFGSHLLPFAFLHGNPWL 208
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 65.2 bits (158), Expect = 7e-12
Identities = 30/260 (11%), Positives = 64/260 (24%), Gaps = 31/260 (11%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771
L V++K + ++ E+ T + + F L+ D L
Sbjct: 27 LLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPS 86
Query: 772 NLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH-- 827
R + + +H + + D+K N + +
Sbjct: 87 LEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNAN 143
Query: 828 ---LAEFGFKYLTQLADGSFPAKIAWTESGEF-----YNAMKEEMYM--------DVYGF 871
+ +FG + D I + E Y ++ ++ D+
Sbjct: 144 MIYVVDFG--MVKFYRDPVTKQHIPYREKKNLSGTARYMSI--NTHLGREQSRRDDLEAL 199
Query: 872 GEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCT 930
G + + L G L G + + + L +
Sbjct: 200 GHVFMYFLR-GSLPWQGLKAAT--NKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYAR 256
Query: 931 RSTPSDRPSMEEALKLLSGL 950
P + L S +
Sbjct: 257 NLAFDATPDYDYLQGLFSKV 276
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.2 bits (158), Expect = 8e-12
Identities = 37/250 (14%), Positives = 76/250 (30%), Gaps = 32/250 (12%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAYLLYDY 767
TG ++K + K + RH L L + + +Y
Sbjct: 27 KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86
Query: 768 LPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 827
G L + + + + A + L + + + D+K N++ D++
Sbjct: 87 ANGGELFFHLS-RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
Query: 828 LAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT 880
+ +FG + G+ Y +D +G G ++ E++
Sbjct: 146 ITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA-----VDWWGLGVVMYEMMC 200
Query: 881 NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSM 940
GRL + L E+ E+ +L E K + + P R
Sbjct: 201 -GRLPFYNQDHER------LFELILMEEIRFPRTLSPEAK---SLLAGLLKKDPKQRLGG 250
Query: 941 -----EEALK 945
+E ++
Sbjct: 251 GPSDAKEVME 260
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.9 bits (149), Expect = 1e-10
Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 14/179 (7%)
Query: 712 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFC------YNRHQAY 762
V++KK+ + V HKN+I LL Y
Sbjct: 39 AVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 98
Query: 763 LLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 822
L+ + + + I+ + D ++ + G+ LH H DLK SNIV
Sbjct: 99 LVMELMDANLC-QVIQMELDHERMSYLLYQMLCGIKHLHSAGII---HRDLKPSNIVVKS 154
Query: 823 NMEPHLAEFGFKYLTQLAD-GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT 880
+ + +FG + + + + E M + +D++ G I+ E++
Sbjct: 155 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 213
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 58.9 bits (141), Expect = 4e-10
Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 18/225 (8%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
+ + ++ + V +L + +L + G+Q L NL+ L+ N
Sbjct: 18 LANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVTT--IEGVQYLNNLIGLELKDN 73
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ P + L+ I ++ + L +
Sbjct: 74 QITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 133
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L + + G Q ++ Q S L+NL+KL +L N
Sbjct: 134 LYLDLNQITNISPLAGLTNLQYLSIGNAQV----------SDLTPLANLSKLTTLKADDN 183
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSL 324
+++ P + + L + L +N++S P A+ NL +++L
Sbjct: 184 KISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 51.2 bits (121), Expect = 1e-07
Identities = 26/217 (11%), Positives = 62/217 (28%), Gaps = 46/217 (21%)
Query: 411 NCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSN 470
++ +++ ++ + + + L I + G T + + L + +
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQ--ADLDGITTLSAFGTGVTT--IEGVQYLNNLIGLELKD 72
Query: 471 NPKLGGMIPAQTWS--------------------------------------LPSLQNFS 492
N L L N
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 493 ASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEV 552
++ ++ + N + ++N +L + +NK+ P
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP-- 190
Query: 553 LARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVS 589
LA LP L + L +N +S P + S+L ++ ++
Sbjct: 191 LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 50.4 bits (119), Expect = 2e-07
Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 22/218 (10%)
Query: 147 SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 206
+L N + + A ++ + +V + L+ + L+ G+ + +L L L
Sbjct: 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKD 72
Query: 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELS 266
N + D P + T + I + + L
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 267 NLTKLESLFLFRNQLAGQVPWE--------------FSRVTTLKSLDLSDNRLSGPIPES 312
L + + LAG + + ++ L +L DN++S P
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP-- 190
Query: 313 FADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWN 350
A L NL + L N++S P L +L I+ + N
Sbjct: 191 LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 46.9 bits (110), Expect = 4e-06
Identities = 30/237 (12%), Positives = 69/237 (29%), Gaps = 20/237 (8%)
Query: 308 PIPESFAD--LKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS 365
I F D L N ++ + ++ TV ++ L + L + + E + +
Sbjct: 8 AINVIFPDPALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTTI--EGVQYLN 63
Query: 366 KLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSF 425
L +++ N P + +L +++ S + + +
Sbjct: 64 NLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVT 123
Query: 426 SGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSL 485
L + + G + +++ +L
Sbjct: 124 PLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLT-----------PLANL 172
Query: 486 PSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLAN 542
L A I+ + P S ++ + N +S P ++N L + L N
Sbjct: 173 SKLTTLKADDNKISD-ISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 45.8 bits (107), Expect = 1e-05
Identities = 26/217 (11%), Positives = 63/217 (29%), Gaps = 22/217 (10%)
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
++ + +N++ ++ ++L + +L F + + L L+L D
Sbjct: 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKD 72
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWN------------ 350
N+++ P LS + +
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 351 --NYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPS 408
+ +S N S + + L L N +
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI--SP 190
Query: 409 LSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLS 445
L++ +L+ + L++N S PL + ++ + L+
Sbjct: 191 LASLPNLIEVHLKNNQISDVSPL--ANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 41.2 bits (95), Expect = 3e-04
Identities = 29/216 (13%), Positives = 69/216 (31%), Gaps = 22/216 (10%)
Query: 365 SKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNS 424
+ + +N ++ G + L F T ++ + ++L+ L L+DN
Sbjct: 19 ANAIKIAAGKSNVTDTVTQADLDG--ITTLSAFGTGVT-TIEG-VQYLNNLIGLELKDNQ 74
Query: 425 FSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWS 484
+ PLK + + I + + + +
Sbjct: 75 ITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVL 134
Query: 485 LPSLQNFSASAC--------------NITGNLPPFKSCKSISVIESHMNNLSGTIPESVS 530
L + + +L P + ++ +++ N +S P ++
Sbjct: 135 YLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LA 192
Query: 531 NCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSH 566
+ L + L NN++ P LA L ++ L++
Sbjct: 193 SLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 49.3 bits (117), Expect = 1e-07
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV 165
L+L+H + + L + LD+S N P + +LR L VL A N+
Sbjct: 3 LHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNAL--EN 57
Query: 166 PAEISQLEHLKVLNLAGSYF-SGPIPSQFGSFKSLEFLHLAGNLL 209
++ L L+ L L + S L L+L GN L
Sbjct: 58 VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 102
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 48.9 bits (116), Expect = 1e-07
Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 27/125 (21%)
Query: 248 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP--------------------- 286
+ L +A +L+ + L L + L L N+L P
Sbjct: 1 RVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENV 58
Query: 287 WEFSRVTTLKSLDLSDNRL-SGPIPESFADLKNLRLLSLMYNEMSG--TVPESLVQ-LPS 342
+ + L+ L L +NRL + L LL+L N + + E L + LPS
Sbjct: 59 DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 118
Query: 343 LEILF 347
+ +
Sbjct: 119 VSSIL 123
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.2 bits (109), Expect = 1e-06
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 6/124 (4%)
Query: 176 KVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235
+VL+LA + + + L L+ N L P L L+ + ++ N +
Sbjct: 1 RVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALEN 57
Query: 236 NIPWQLGNMSEVQYLDIAGANL-SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTT 294
N+ +Q L + L + + L + +L L L N L + +
Sbjct: 58 VDGVA--NLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Query: 295 LKSL 298
L S+
Sbjct: 116 LPSV 119
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.2 bits (101), Expect = 1e-05
Identities = 20/125 (16%), Positives = 46/125 (36%), Gaps = 7/125 (5%)
Query: 441 YIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITG 500
+ L+ T + + Q + + ++S+N +L + PA +L L+ AS +
Sbjct: 2 VLHLAHKDLT--VLCHLEQLLLVTHLDLSHN-RLRALPPA-LAALRCLEVLQASDNALEN 57
Query: 501 NLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLI---GSIPEVLARLP 557
+ ++ + + + +C L ++L N L G + LP
Sbjct: 58 VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLP 117
Query: 558 VLGVL 562
+ +
Sbjct: 118 SVSSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.4 bits (99), Expect = 3e-05
Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 4/106 (3%)
Query: 274 LFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV 333
L L L V ++ + LDLS NRL P + A L+ L +L + V
Sbjct: 3 LHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQ-ASDNALENV 58
Query: 334 PESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379
E+L N + + L +L +++ N+
Sbjct: 59 DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 39.3 bits (91), Expect = 3e-04
Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 26/100 (26%)
Query: 519 NNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVL------------------- 559
+L T+ + + + +DL++N+L P LA L L
Sbjct: 8 KDL--TVLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALENVDGVANL 64
Query: 560 ---GVLDLSHNSL-SGQIPAKFGSCSSLTVLNVSFNDISG 595
L L +N L SC L +LN+ N +
Sbjct: 65 PRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 36.6 bits (84), Expect = 0.003
Identities = 22/132 (16%), Positives = 38/132 (28%), Gaps = 28/132 (21%)
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379
R+L L + ++ TV L QL + L + +N P L L + S N
Sbjct: 1 RVLHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRAL-PPALAALRCLEVLQASDNALE- 56
Query: 380 SIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDI 439
+ + L +L+L +N P +
Sbjct: 57 -NVDGVANLPRLQELLLCNNRLQ-----------------------QSAAIQPLVSCPRL 92
Query: 440 NYIDLSRNGFTG 451
++L N
Sbjct: 93 VLLNLQGNSLCQ 104
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 52.5 bits (124), Expect = 1e-07
Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 9/97 (9%)
Query: 225 HMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQ 284
N I ++ L+++ L +P L +L N L +
Sbjct: 264 PNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLERL---IASFNHL-AE 318
Query: 285 VPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRL 321
VP LK L + N L P+ +++LR+
Sbjct: 319 VPELPQN---LKQLHVEYNPLRE-FPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 52.1 bits (123), Expect = 2e-07
Identities = 51/316 (16%), Positives = 99/316 (31%), Gaps = 25/316 (7%)
Query: 295 LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL--PSLEILFIWN-N 351
L+L++ LS +PE +L L N ++ +PE L ++ + +
Sbjct: 40 AHELELNNLGLSS-LPEL---PPHLESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALS 94
Query: 352 YFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSN 411
L N++L + N+ I + + S F + + L
Sbjct: 95 DLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEE 154
Query: 412 CSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNN 471
L L ++ LK ++ + ++ L NN
Sbjct: 155 LPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNN 214
Query: 472 PKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSIS--------VIESHMNNLSG 523
+ ++++ + F ++N S
Sbjct: 215 LLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSN 274
Query: 524 TIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSL 583
I LE ++++NNKLI +P + R L L S N L+ ++P +L
Sbjct: 275 EIRSLCDLPPSLEELNVSNNKLI-ELPALPPR---LERLIASFNHLA-EVP---ELPQNL 326
Query: 584 TVLNVSFNDISGSIPS 599
L+V +N + P
Sbjct: 327 KQLHVEYNPLR-EFPD 341
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 46.0 bits (107), Expect = 1e-05
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
Query: 275 FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP 334
+ N + ++ +L+ L++S+N+L +P L L +N ++ VP
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVP 320
Query: 335 ESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLR 368
E +L+ L + N P+ LR
Sbjct: 321 EL---PQNLKQLHVEYNPLR-EFPDIPESVEDLR 350
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 43.7 bits (101), Expect = 8e-05
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
L +LN+S+N + P L L S N+ + P Q+L+ L N
Sbjct: 286 LEELNVSNNKLI-ELPALPPRLE---RLIASFNHLA-EVPELPQNLK---QLHVEYNPLR 337
Query: 163 GSVPAEISQLEHLKVLN 179
P +E L++ +
Sbjct: 338 -EFPDIPESVEDLRMNS 353
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 43.3 bits (100), Expect = 9e-05
Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 9/95 (9%)
Query: 107 NLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP 166
N+ S + SL L++S N P L L A N + VP
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLER---LIASFNHLA-EVP 320
Query: 167 AEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 201
L+ L++ + P S + L
Sbjct: 321 ELPQNLKQ---LHVEYNPLRE-FPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 38.7 bits (88), Expect = 0.003
Identities = 22/92 (23%), Positives = 33/92 (35%), Gaps = 8/92 (8%)
Query: 535 LERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDIS 594
++L N L S+PE+ P L L S NSL+ ++P SL L V N++
Sbjct: 40 AHELELNNLGL-SSLPELP---PHLESLVASCNSLT-ELPE---LPQSLKSLLVDNNNLK 91
Query: 595 GSIPSGKVLRLMGSSAYAGNPKLCGAPLQPCH 626
+L +G S
Sbjct: 92 ALSDLPPLLEYLGVSNNQLEKLPELQNSSFLK 123
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 52.6 bits (124), Expect = 1e-07
Identities = 41/320 (12%), Positives = 84/320 (26%), Gaps = 34/320 (10%)
Query: 317 KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG----SLPENLGRNSKLRWVDV 372
K+L+L ++ + +V L++ S++ + + N L EN+ L +
Sbjct: 8 KSLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEF 66
Query: 373 STNNFNGSIPPDICSGGVLFKLILFSN----NFTGSLSPSLSNCSSLVRLRLEDNSFSGE 428
S + F G + +I L L S + + L ++
Sbjct: 67 S-DIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEH 125
Query: 429 IPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNP---KLGGMIPAQTWSL 485
+ L + L ++R + A L N S
Sbjct: 126 LYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH 185
Query: 486 PSLQNFSASACNITGNLPPFKSCKSIS----------VIESHMNNLSGTIPESVSNCVEL 535
L I + ++ + + S + ++ + L
Sbjct: 186 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNL 245
Query: 536 ERIDLANNKLIGSIPEVLAR------LPVLGVLDLSHNSLSGQIP-----AKFGSCSSLT 584
+ L + L + L L L +N + L
Sbjct: 246 RELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLL 305
Query: 585 VLNVSFNDISGSIPSGKVLR 604
L ++ N S +R
Sbjct: 306 FLELNGNRFSEEDDVVDEIR 325
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 48.7 bits (114), Expect = 2e-06
Identities = 44/330 (13%), Positives = 88/330 (26%), Gaps = 35/330 (10%)
Query: 250 LDIAGANLSGSIPKELSNLTKLESLFLFRNQL----AGQVPWEFSRVTTLKSLDLSDNRL 305
LD S+ L ++ + L N + A + + L+ + SD
Sbjct: 12 LDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFT 71
Query: 306 SGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS 365
E L+ L ++L++ P L + + +N F + E L
Sbjct: 72 GRVKDEIPEALRLL--------------LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFL 117
Query: 366 KLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSF 425
N + P + L N + P S RL
Sbjct: 118 SKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKE 177
Query: 426 SGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSL 485
+ L + + A E + + + ++
Sbjct: 178 WAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 237
Query: 486 PSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKL 545
+ + L + ++ S + N+ L+ + L N++
Sbjct: 238 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIG------------LQTLRLQYNEI 285
Query: 546 IGSIPEVLA-----RLPVLGVLDLSHNSLS 570
L ++P L L+L+ N S
Sbjct: 286 ELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.7 bits (119), Expect = 2e-07
Identities = 31/243 (12%), Positives = 64/243 (26%), Gaps = 17/243 (6%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV 165
+ + + P ++ + I L G +L ++ N +
Sbjct: 13 FLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI 69
Query: 166 PAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN----DQIPAELGMLK 221
A++ + + +L + + + K
Sbjct: 70 EADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQK 129
Query: 222 TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 281
+ ++ N + +G E L + + + E N L
Sbjct: 130 VLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNL 189
Query: 282 AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
F + LD+S R+ +LK LR S +L +LP
Sbjct: 190 EELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST----------YNLKKLP 239
Query: 342 SLE 344
+LE
Sbjct: 240 TLE 242
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.7 bits (101), Expect = 5e-05
Identities = 24/236 (10%), Positives = 51/236 (21%), Gaps = 10/236 (4%)
Query: 368 RWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSG 427
R + IP D+ +L + S L ++ + N
Sbjct: 11 RVFLCQESKVT-EIPSDLPRN--AIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE 67
Query: 428 EIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPS 487
I + + + + +P
Sbjct: 68 VIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSL 127
Query: 488 LQNFSASACNITGNLPPFKSCKSISVIESHMN----NLSGTIPESVSNCVELERIDLANN 543
+ NI + S +S + + + + E NN
Sbjct: 128 QKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNN 187
Query: 544 KLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPS 599
L +V +LD+S + + L + +P+
Sbjct: 188 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL---KKLPT 240
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.1 bits (89), Expect = 0.001
Identities = 20/219 (9%), Positives = 48/219 (21%), Gaps = 30/219 (13%)
Query: 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSL 343
++P + L +L +F+ +L + + N++ + +
Sbjct: 22 EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 79
Query: 344 EILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN------------------------- 378
+ + + +N
Sbjct: 80 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNIN 139
Query: 379 ---GSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQ 435
+ L L N + + + ++N+ F
Sbjct: 140 IHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHG 199
Query: 436 LPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKL 474
+D+SR + KL + N KL
Sbjct: 200 ASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLKKL 238
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (88), Expect = 0.002
Identities = 29/224 (12%), Positives = 55/224 (24%), Gaps = 9/224 (4%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
+P+++ + L + F F LE + ++ N + + I A++
Sbjct: 22 EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 79
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS----GSIPKELSNLTKLESLFLFRN 279
H + + +N + K S L + N
Sbjct: 80 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNIN 139
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
+ L L+ N + +F + L N + +
Sbjct: 140 IHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHG 199
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPP 383
IL I L KLR +P
Sbjct: 200 ASGPVILDISRTRIHSLPSYGLENLKKLRARS---TYNLKKLPT 240
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 49.8 bits (118), Expect = 3e-07
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 24/139 (17%)
Query: 709 KAVLPTGITVSVKKIEWGATRIKIV-----------SEFITRIGTVRHKNLIRLLGFCYN 757
VK + G T K V S R + L +L G
Sbjct: 18 NCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVP 77
Query: 758 RHQAYLLYDYLPNGNLSE----KIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 813
+ Y + N L E K + +++ + + +H I HGDL
Sbjct: 78 KV-----YAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRG---IVHGDL 129
Query: 814 KASNIVFDENMEPHLAEFG 832
N++ E + +F
Sbjct: 130 SQYNVLVSE-EGIWIIDFP 147
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.8 bits (120), Expect = 4e-07
Identities = 28/217 (12%), Positives = 67/217 (30%), Gaps = 25/217 (11%)
Query: 712 LPTGITVSVKKI-------EWGATRIKIVSEF----ITRIGTVRHKNLIRLLGFCYNRHQ 760
+ V++K + E IK++ T+ ++ ++++LL ++
Sbjct: 35 MVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP 94
Query: 761 AYLLYDYLPNGN-------LSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 813
+ + + + +I + GL ++H C I H D+
Sbjct: 95 NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDI 152
Query: 814 KASNIVFD-ENMEPHLAEFGFKYLTQLADGSFPAKIAWTE----SGEFYNAMKEEMYMDV 868
K N++ + + +L + L + S E D+
Sbjct: 153 KPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADI 212
Query: 869 YGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 905
+ +I E++T L D + ++
Sbjct: 213 WSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 249
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (120), Expect = 5e-07
Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Query: 533 VELERIDLANNKLIGS-IPEVLARLPVLGVLDLSHNSLSGQ----IPAKFGSCSSLTVLN 587
++++ +D+ +L + E+L L V+ L L+ I + +L LN
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 588 VSFNDISGSIPS 599
+ N++
Sbjct: 62 LRSNELGDVGVH 73
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (112), Expect = 3e-06
Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 13/96 (13%)
Query: 286 PWEFSRVTTLKSLDLSDNRLSG----PIPESFADLKNLRLLSLMYNEMSGTVPESLVQ-- 339
+ L+ L L+D +S + + +LR L L N + LV+
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 340 ---LPSLEILFIWNNYFSGSLPENLG----RNSKLR 368
LE L +++ Y+S + + L LR
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLR 457
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (112), Expect = 4e-06
Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 13/95 (13%)
Query: 265 LSNLTKLESLFLFRNQL----AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFAD----- 315
+ L L+L + + +L+ LDLS+N L +
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 424
Query: 316 LKNLRLLSLMYNEMSGTVPESLVQL----PSLEIL 346
L L L S + + L L PSL ++
Sbjct: 425 GCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (111), Expect = 6e-06
Identities = 15/79 (18%), Positives = 23/79 (29%), Gaps = 9/79 (11%)
Query: 530 SNCVELERIDLANNKL----IGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGS-----C 580
L + LA+ + S+ L L LDLS+N L +
Sbjct: 366 QPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPG 425
Query: 581 SSLTVLNVSFNDISGSIPS 599
L L + S +
Sbjct: 426 CLLEQLVLYDIYWSEEMED 444
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.3 bits (110), Expect = 6e-06
Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 10/94 (10%)
Query: 246 EVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPWEFSRV----TTLKSLDL 300
++Q LDI LS + EL L + + + L L + S L L+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 301 SDNRLSGPIPESFADL-----KNLRLLSLMYNEM 329
N L ++ LSL +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.7 bits (106), Expect = 2e-05
Identities = 13/95 (13%), Positives = 29/95 (30%), Gaps = 21/95 (22%)
Query: 295 LKSLDLSDNRLS-GPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
++SLD+ LS E L+ +++ L ++ + +
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDI---------------- 47
Query: 354 SGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG 388
L N L +++ +N + G
Sbjct: 48 ----SSALRVNPALAELNLRSNELGDVGVHCVLQG 78
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (102), Expect = 6e-05
Identities = 11/94 (11%), Positives = 26/94 (27%), Gaps = 10/94 (10%)
Query: 102 ELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSG----HFPGGIQSLRNLLVLDA 156
++ L++ S E+ L + + + ++ L L+
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 157 FSNSFSGSVPAEISQL-----EHLKVLNLAGSYF 185
SN + Q ++ L+L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (101), Expect = 8e-05
Identities = 14/81 (17%), Positives = 23/81 (28%), Gaps = 10/81 (12%)
Query: 519 NNLSGT-IPESVSNCVELERIDLANNKL----IGSIPEVLARLPVLGVLDLSHNSLSGQI 573
LS E + + + + L + L I L P L L+L N L
Sbjct: 12 EELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVG 71
Query: 574 PAKFGS-----CSSLTVLNVS 589
+ L++
Sbjct: 72 VHCVLQGLQTPSCKIQKLSLQ 92
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.7 bits (98), Expect = 2e-04
Identities = 22/147 (14%), Positives = 40/147 (27%), Gaps = 14/147 (9%)
Query: 46 HDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRI-FFNELV 104
+ +S V + + I+ + +G + L
Sbjct: 313 QLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLR 372
Query: 105 DLNLSHNSFSGQ----FPVEIFNLTSLISLDISRNNFSGHFPGGI-----QSLRNLLVLD 155
L L+ S + SL LD+S N + Q L L
Sbjct: 373 VLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLV 432
Query: 156 AFSNSFSGSVPAEISQLE----HLKVL 178
+ +S + + LE L+V+
Sbjct: 433 LYDIYWSEEMEDRLQALEKDKPSLRVI 459
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (94), Expect = 6e-04
Identities = 19/100 (19%), Positives = 31/100 (31%), Gaps = 23/100 (23%)
Query: 341 PSLEILFIWNNYFSG----SLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLIL 396
L +L++ + S SL L N LR +D+S N + +
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVES-------- 420
Query: 397 FSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQL 436
L +L L D +S E+ + L
Sbjct: 421 -----------VRQPGCLLEQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (94), Expect = 6e-04
Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Query: 150 NLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSYFSG----PIPSQFGSFKSLEFLHL 204
++ LD S + AE+ L+ +V+ L + I S +L L+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 205 AGNLLNDQIPAELG 218
N L D +
Sbjct: 63 RSNELGDVGVHCVL 76
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (91), Expect = 0.001
Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 13/96 (13%)
Query: 504 PFKSCKSISVIESHMNNLSGT----IPESVSNCVELERIDLANNKLIGSIPEVLAR---- 555
+ + V+ ++S + + ++ L +DL+NN L + L
Sbjct: 364 LGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQ 423
Query: 556 -LPVLGVLDLSHNSLSGQIPAKFG----SCSSLTVL 586
+L L L S ++ + SL V+
Sbjct: 424 PGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.6 bits (90), Expect = 0.002
Identities = 10/75 (13%), Positives = 22/75 (29%), Gaps = 5/75 (6%)
Query: 367 LRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTG----SLSPSLSNCSSLVRLRLE 421
++ +D+ + + ++ + L T +S +L +L L L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 422 DNSFSGEIPLKFSQL 436
N Q
Sbjct: 64 SNELGDVGVHCVLQG 78
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.5 bits (106), Expect = 4e-06
Identities = 22/123 (17%), Positives = 38/123 (30%), Gaps = 2/123 (1%)
Query: 503 PPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIP-EVLARLPVLGV 561
P S + + + L + + N + + + L L L
Sbjct: 2 PDACCPHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRN 60
Query: 562 LDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSAYAGNPKLCGAP 621
L + + L P F L+ LN+SFN + + +GNP C
Sbjct: 61 LTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCA 120
Query: 622 LQP 624
L+
Sbjct: 121 LRW 123
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.2 bits (100), Expect = 3e-05
Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 1/104 (0%)
Query: 442 IDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN 501
+ +R+G + A L + N L + L L+N + +
Sbjct: 13 LRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFV 71
Query: 502 LPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKL 545
P + N ++ + L+ + L+ N L
Sbjct: 72 APDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPL 115
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (90), Expect = 6e-04
Identities = 25/150 (16%), Positives = 45/150 (30%), Gaps = 11/150 (7%)
Query: 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIP-ESFADLKNLRLLSLMYNEM 329
L R+ L L + + + + L LR L+++ + +
Sbjct: 10 SSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL 68
Query: 330 SGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGG 389
P++ P L L + N SL + L+ + +S N + CS
Sbjct: 69 RFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH-------CSCA 120
Query: 390 VLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419
L L + G + C L
Sbjct: 121 -LRWLQRWEEEGLGGVPEQKLQCHGQGPLA 149
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 46.2 bits (108), Expect = 5e-06
Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 16/199 (8%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
E + L + + V +L + +L R G++ L NL ++ +N
Sbjct: 17 LAEKMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGIKS--IDGVEYLNNLTQINFSNN 72
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ P + ++N P+ + F + ++ + L
Sbjct: 73 QLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR 132
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L+ ++ + G Q N S Q D+ K L+NLT LE L + N
Sbjct: 133 LELSSNTISDISALSGLTSLQQLNFSSNQVTDL----------KPLANLTTLERLDISSN 182
Query: 280 QLAGQVPWEFSRVTTLKSL 298
+++ +++T L+SL
Sbjct: 183 KVSD--ISVLAKLTNLESL 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 43.5 bits (101), Expect = 4e-05
Identities = 29/193 (15%), Positives = 64/193 (33%), Gaps = 24/193 (12%)
Query: 410 SNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVS 469
+ + ++ L + + + + L + + R G + + L N S
Sbjct: 15 TALAEKMKTVLGKTNVTDTVSQ--TDLDQVTTLQADRLGIKS--IDGVEYLNNLTQINFS 70
Query: 470 NNPKLGGM----------------IPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISV 513
NN A L +L N + ++
Sbjct: 71 NNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNL 130
Query: 514 IESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQI 573
+++ + + ++S L++++ ++N++ P LA L L LD+S N +S I
Sbjct: 131 NRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSD-I 187
Query: 574 PAKFGSCSSLTVL 586
++L L
Sbjct: 188 SV-LAKLTNLESL 199
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 46.2 bits (108), Expect = 6e-06
Identities = 40/226 (17%), Positives = 69/226 (30%), Gaps = 40/226 (17%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
F E + NL S + V L S+ + + ++ GIQ L N+ L N
Sbjct: 23 FAETIKDNLKKKSVTD--AVTQNELNSIDQIIANNSDIKS--VQGIQYLPNVTKLFLNGN 78
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ I L +LK L + + I + +
Sbjct: 79 KLTD-----IKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHL 133
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
+ + + +L + + D +++ L+ LTKL++L
Sbjct: 134 PQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIV-----PLAGLTKLQNL----- 183
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325
LS N +S + A LKNL +L L
Sbjct: 184 -------------------YLSKNHISD--LRALAGLKNLDVLELF 208
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 45.8 bits (107), Expect = 7e-06
Identities = 30/197 (15%), Positives = 74/197 (37%), Gaps = 16/197 (8%)
Query: 393 KLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGG 452
K L + T +++ + +S+ ++ ++ +++ LP++ + L+ N T
Sbjct: 28 KDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQGIQY--LPNVTKLFLNGNKLTDI 83
Query: 453 IPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSIS 512
P + + + + L + + SL++ ++ +
Sbjct: 84 KPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHN------GISDINGLVHLPQLE 137
Query: 513 VIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQ 572
+ N ++ S ++ ++ +N++ +P LA L L L LS N +S
Sbjct: 138 SLYLGNNKITDITVLSRLTKLDTLSLE--DNQISDIVP--LAGLTKLQNLYLSKNHISD- 192
Query: 573 IPAKFGSCSSLTVLNVS 589
+ A +L VL +
Sbjct: 193 LRA-LAGLKNLDVLELF 208
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 43.8 bits (102), Expect = 3e-05
Identities = 43/204 (21%), Positives = 81/204 (39%), Gaps = 16/204 (7%)
Query: 147 SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 206
+ + + S + +V ++L + + S Q+ ++ L L G
Sbjct: 22 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQGIQY--LPNVTKLFLNG 77
Query: 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELS 266
N L D P L LK + + + N + + + L+ + S L
Sbjct: 78 NKLTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLE----HNGISDINGLV 131
Query: 267 NLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMY 326
+L +LESL+L N++ SL+ DN++S +P A L L+ L L
Sbjct: 132 HLPQLESLYLGNNKITDITVLSRLTKLDTLSLE--DNQISDIVP--LAGLTKLQNLYLSK 187
Query: 327 NEMSGTVPESLVQLPSLEILFIWN 350
N +S +L L +L++L +++
Sbjct: 188 NHISD--LRALAGLKNLDVLELFS 209
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 37.7 bits (86), Expect = 0.003
Identities = 36/205 (17%), Positives = 69/205 (33%), Gaps = 19/205 (9%)
Query: 408 SLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFN 467
S + ++ L+ S + + ++L I+ I + + I +
Sbjct: 19 SDDAFAETIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQG--IQYLPNVTKLF 74
Query: 468 VSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPE 527
++ N KL + L +L+N + + + + +
Sbjct: 75 LNGN-KLTDI-----KPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDIN 128
Query: 528 SVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLN 587
+ + +LE + L NNK+ RL L L L N +S +P + L L
Sbjct: 129 GLVHLPQLESLYLGNNKITDITVLS--RLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 184
Query: 588 VSFNDIS-----GSIPSGKVLRLMG 607
+S N IS + + VL L
Sbjct: 185 LSKNHISDLRALAGLKNLDVLELFS 209
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 37.3 bits (85), Expect = 0.004
Identities = 33/260 (12%), Positives = 74/260 (28%), Gaps = 66/260 (25%)
Query: 308 PIPESFAD--LKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS 365
PI + F+D +L ++ V ++ +L S++ + N+
Sbjct: 13 PIKQIFSDDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQG------- 63
Query: 366 KLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSF 425
+ ++ +L L N
Sbjct: 64 -------------------------------------------IQYLPNVTKLFLNGNKL 80
Query: 426 SGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSL 485
+ P + L ++ ++ L N + K + + G++
Sbjct: 81 TDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQL-- 136
Query: 486 PSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKL 545
N ++ + + N +S +P ++ +L+ + L+ N +
Sbjct: 137 ----ESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190
Query: 546 IGSIPEVLARLPVLGVLDLS 565
S LA L L VL+L
Sbjct: 191 --SDLRALAGLKNLDVLELF 208
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.9 bits (105), Expect = 7e-06
Identities = 18/136 (13%), Positives = 37/136 (27%), Gaps = 7/136 (5%)
Query: 287 WEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEIL 346
+++ + LDL ++ I A L + NE+ L L+ L
Sbjct: 12 AQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKLDGFP--LLRRLKTL 68
Query: 347 FIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLS 406
+ NN L + ++ N+ D + + N +
Sbjct: 69 LVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKK 128
Query: 407 P----SLSNCSSLVRL 418
+ + L
Sbjct: 129 HYRLYVIYKVPQVRVL 144
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.5 bits (91), Expect = 5e-04
Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Query: 528 SVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLN 587
+N V +DL K I I + A L +D S N + + F L L
Sbjct: 13 QYTNAVRDRELDLRGYK-IPVIENLGATLDQFDAIDFSDNEI--RKLDGFPLLRRLKTLL 69
Query: 588 VSFNDISGSIP 598
V+ N I
Sbjct: 70 VNNNRICRIGE 80
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.2 bits (85), Expect = 0.003
Identities = 22/136 (16%), Positives = 41/136 (30%), Gaps = 7/136 (5%)
Query: 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179
+ N LD+ +L +D FS++ + L LK L
Sbjct: 13 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAID-FSDNEIRKLDG-FPLLRRLKTLL 69
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND----QIPAELGMLKTVTHMEIGYNFYQG 235
+ + + L L L N L + A L L + + +
Sbjct: 70 VNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKH 129
Query: 236 NIPWQLGNMSEVQYLD 251
+ + + +V+ LD
Sbjct: 130 YRLYVIYKVPQVRVLD 145
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.2 bits (85), Expect = 0.003
Identities = 17/140 (12%), Positives = 44/140 (31%), Gaps = 7/140 (5%)
Query: 167 AEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHM 226
A+ + + L+L G I + + + + + N + +L+ + +
Sbjct: 12 AQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKLDGFP--LLRRLKTL 68
Query: 227 EIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG-SIPKELSNLTKLESLFLF---RNQLA 282
+ N + ++ L + +L L++L L L +
Sbjct: 69 LVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKK 128
Query: 283 GQVPWEFSRVTTLKSLDLSD 302
+ +V ++ LD
Sbjct: 129 HYRLYVIYKVPQVRVLDFQK 148
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.7 bits (97), Expect = 8e-05
Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 501 NLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKL--IGSIPEVLARLPV 558
P ++I V+ + ++++ T+ N EL ++L+NN+L + + ++ + P
Sbjct: 33 RSDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPN 92
Query: 559 LGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLR 604
L +L+LS N L + L L + N +S +
Sbjct: 93 LKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYI 138
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (91), Expect = 6e-04
Identities = 21/130 (16%), Positives = 48/130 (36%), Gaps = 7/130 (5%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
+ L+L + ++ + L+ ++ + +++ LL L+ +
Sbjct: 20 YDGSQQALDLKGL----RSDPDLVAQNIDVVLNRR-SSMAATLRIIEENIPELLSLNLSN 74
Query: 159 NSFSG--SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE 216
N + + + + +LK+LNL+G+ LE L L GN L+D +
Sbjct: 75 NRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQ 134
Query: 217 LGMLKTVTHM 226
+ +
Sbjct: 135 STYISAIRER 144
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.3 bits (88), Expect = 0.001
Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 9/121 (7%)
Query: 356 SLPENLGR--NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCS 413
L + + + + +D+ PD+ + + L ++ +L N
Sbjct: 11 QLKLIMSKRYDGSQQALDLKGLRS----DPDLVAQNIDVVLNR-RSSMAATLRIIEENIP 65
Query: 414 SLVRLRLEDNSFSGEIPLK--FSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNN 471
L+ L L +N + + P++ ++LS N D + KLE + N
Sbjct: 66 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGN 125
Query: 472 P 472
Sbjct: 126 S 126
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.5 bits (86), Expect = 0.002
Identities = 20/143 (13%), Positives = 41/143 (28%), Gaps = 12/143 (8%)
Query: 189 IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ 248
+ L +L + +L + + + N+ E+
Sbjct: 12 LKLIMSKRYDGSQQAL--DLKGLRSDPDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELL 68
Query: 249 YLDIAGANLSG--SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS 306
L+++ L + + L+ L L N+L + + + L+ L L N LS
Sbjct: 69 SLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128
Query: 307 GPIPES-------FADLKNLRLL 322
+ L L
Sbjct: 129 DTFRDQSTYISAIRERFPKLLRL 151
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 198 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 25/170 (14%), Positives = 55/170 (32%), Gaps = 16/170 (9%)
Query: 288 EFSRVTTLKSLDLSDNRLSGPIP------ESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
F ++ + + L G IP + + LK + L+L N + SL +
Sbjct: 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNI--EKISSLSGME 70
Query: 342 SLEILFIWNNYFSGSL----PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILF 397
+L IL + N + + + +++ + + K+ +
Sbjct: 71 NLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITNW 130
Query: 398 SNNFTGSLSPSLSNCS----SLVRLRLEDNSFSGEIPLKFSQLPDINYID 443
+ L + L E+N+ S +LP++ +D
Sbjct: 131 GEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 955 | |||
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.98 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.97 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.95 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.95 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.93 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.92 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.91 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.91 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.87 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.87 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.84 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.79 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.76 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.73 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.72 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.72 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.71 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.7 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.69 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.68 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.67 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.66 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.66 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.64 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.62 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.48 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.47 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.46 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.44 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.44 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.4 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.34 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.33 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.2 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.17 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.09 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.07 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.23 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.09 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.74 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.5 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.36 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.29 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 96.48 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.39 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.27 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.15 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 94.45 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 86.67 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-48 Score=413.53 Aligned_cols=248 Identities=20% Similarity=0.286 Sum_probs=197.1
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||+||+|+..+++.||||+++......+.+.+|++++++++|||||+++|+|.+++..++|||||++|+|.
T Consensus 9 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~ 88 (263)
T d1sm2a_ 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 88 (263)
T ss_dssp EEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred EEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHH
Confidence 67889999999999999989999999999876666788999999999999999999999999999999999999999999
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---cccc
Q 002186 775 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAKI 848 (955)
Q Consensus 775 ~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~~~~ 848 (955)
+++.. ..+|..+..|+.|+|+||+|+|+. +|+||||||+|||+|.++.+||+|||+++......... ..++
T Consensus 89 ~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt 165 (263)
T d1sm2a_ 89 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 165 (263)
T ss_dssp HHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC------------------C
T ss_pred HHhhccccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCCCceeecceecC
Confidence 99865 457999999999999999999998 99999999999999999999999999997654332211 2244
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..|++||+.....++.++|||||||++|||+|++.|+........ ....+........+. ....++.+++.+
T Consensus 166 ~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~-----~~~~i~~~~~~~~p~---~~~~~l~~li~~ 237 (263)
T d1sm2a_ 166 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-----VVEDISTGFRLYKPR---LASTHVYQIMNH 237 (263)
T ss_dssp TTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHH-----HHHHHHHTCCCCCCT---TSCHHHHHHHHH
T ss_pred cccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHH-----HHHHHHhcCCCCCcc---ccCHHHHHHHHH
Confidence 568889999988999999999999999999997777654332111 111111111011111 123467789999
Q ss_pred ccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 929 CTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
||+.||++||||+||+++|+++++.
T Consensus 238 cl~~~p~~Rps~~~il~~L~~i~es 262 (263)
T d1sm2a_ 238 CWKERPEDRPAFSRLLRQLAEIAES 262 (263)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HccCCHhHCcCHHHHHHHHHHHHhC
Confidence 9999999999999999999988654
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1e-47 Score=411.83 Aligned_cols=248 Identities=22% Similarity=0.292 Sum_probs=203.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
..+.||+|+||+||+|+. .+|+.||||+++......+.+.+|+++|++++|||||+++|+|.+++..++|||||++|+|
T Consensus 21 ~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l 100 (287)
T d1opja_ 21 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 100 (287)
T ss_dssp EEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred EeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcch
Confidence 678899999999999986 4799999999987666677899999999999999999999999999999999999999999
Q ss_pred hHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---cc
Q 002186 774 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PA 846 (955)
Q Consensus 774 ~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~~ 846 (955)
.+++.. ..++..+..|+.|+|+||+|||+. +|+||||||+|||++.++.+||+|||+++......... ..
T Consensus 101 ~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~ 177 (287)
T d1opja_ 101 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 177 (287)
T ss_dssp HHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEE
T ss_pred HHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecCCCCceeecccc
Confidence 999864 468999999999999999999998 99999999999999999999999999998654332211 12
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
++..|++||+.....++.++|||||||++|||+||+.|+..+..... ....+..-.. ...+ .....++.+++
T Consensus 178 g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~--~~~~i~~~~~---~~~~---~~~~~~l~~li 249 (287)
T d1opja_ 178 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLEKDYR---MERP---EGCPEKVYELM 249 (287)
T ss_dssp ECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHHHTTCC---CCCC---TTCCHHHHHHH
T ss_pred ccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHH--HHHHHhcCCC---CCCC---ccchHHHHHHH
Confidence 44557889998888999999999999999999998888765443211 0011111111 1111 12234677899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
.+||+.||++||||+||++.|+.+.+.
T Consensus 250 ~~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 250 RACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred HHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 999999999999999999999887654
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-47 Score=406.20 Aligned_cols=244 Identities=20% Similarity=0.306 Sum_probs=198.9
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||+||+|+..+++.||||+++......+.+.+|++++++++|||||+++|+|.+ +..++|||||++|+|.
T Consensus 17 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~~g~L~ 95 (272)
T d1qpca_ 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLV 95 (272)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHH
T ss_pred EeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeCCCCcHH
Confidence 678899999999999999889999999998766667789999999999999999999998855 5679999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---CCccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---SFPAK 847 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~---~~~~~ 847 (955)
+++.. .++|.++.+|+.|||+||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....+
T Consensus 96 ~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~g 172 (272)
T d1qpca_ 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 172 (272)
T ss_dssp HHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCC
T ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccCCccccccccCC
Confidence 98865 579999999999999999999998 999999999999999999999999999987543221 11224
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
+..|++||+.....++.++|||||||++|||+||+.|+........ ....+........+. ....++.+++.
T Consensus 173 t~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~-----~~~~i~~~~~~~~p~---~~~~~l~~li~ 244 (272)
T d1qpca_ 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-----VIQNLERGYRMVRPD---NCPEELYQLMR 244 (272)
T ss_dssp CTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHHHHTTCCCCCCT---TCCHHHHHHHH
T ss_pred cccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHhcCCCCCcc---cChHHHHHHHH
Confidence 4568899999888899999999999999999998877764432111 111111111011111 22345778999
Q ss_pred HccCCCCCCCCCHHHHHHHhhcc
Q 002186 928 LCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+||+.||++||||+||+++|+.+
T Consensus 245 ~cl~~~P~~Rpt~~ei~~~L~~~ 267 (272)
T d1qpca_ 245 LCWKERPEDRPTFDYLRSVLEDF 267 (272)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHhhhh
Confidence 99999999999999999998764
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-46 Score=394.71 Aligned_cols=244 Identities=16% Similarity=0.188 Sum_probs=201.1
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||+||+|+..+++.||||+++......+.+.+|++++++++|||||+++|+|.+++..++||||+++|+|.
T Consensus 8 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~ 87 (258)
T d1k2pa_ 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 87 (258)
T ss_dssp CCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHH
T ss_pred EeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHH
Confidence 67889999999999999988999999999887767788999999999999999999999999999999999999999999
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---cccc
Q 002186 775 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAKI 848 (955)
Q Consensus 775 ~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~~~~ 848 (955)
+++.. ..++..+.+++.|+|+||+|||+. +|+||||||+||+++.++.+||+|||+++......... ..++
T Consensus 88 ~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t 164 (258)
T d1k2pa_ 88 NYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 164 (258)
T ss_dssp HHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCC
T ss_pred HhhhccccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCC
Confidence 99754 568999999999999999999998 99999999999999999999999999997654332211 2245
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
.+|++||......++.++|||||||++|||+| |+.||..... . +....+........+. ....++.+++.
T Consensus 165 ~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~-~-----~~~~~i~~~~~~~~p~---~~~~~l~~li~ 235 (258)
T d1k2pa_ 165 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN-S-----ETAEHIAQGLRLYRPH---LASEKVYTIMY 235 (258)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCH-H-----HHHHHHHTTCCCCCCT---TCCHHHHHHHH
T ss_pred CCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCH-H-----HHHHHHHhCCCCCCcc---cccHHHHHHHH
Confidence 56889999998899999999999999999999 6777753221 1 1111111111111111 22346779999
Q ss_pred HccCCCCCCCCCHHHHHHHhhcc
Q 002186 928 LCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+||+.||++||||+|++++|.+|
T Consensus 236 ~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 236 SCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp HTTCSSGGGSCCHHHHHHHHHCC
T ss_pred HHccCCHhHCcCHHHHHHHhhCC
Confidence 99999999999999999999764
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-47 Score=404.24 Aligned_cols=247 Identities=17% Similarity=0.220 Sum_probs=191.2
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||+||+|+..+ .||||+++.. ....+.+.+|++++++++|||||+++|++.+ +..++|||||++|
T Consensus 12 ~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey~~~g 88 (276)
T d1uwha_ 12 VGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGS 88 (276)
T ss_dssp CCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCCEE
T ss_pred EEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEecCCCC
Confidence 67889999999999998743 5999999753 3346778999999999999999999999855 5689999999999
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC----C
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----F 844 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~----~ 844 (955)
+|.++++. ..+|.++..|+.|+|+||+|||+. +||||||||+|||++.++.+||+|||+++........ .
T Consensus 89 ~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~ 165 (276)
T d1uwha_ 89 SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165 (276)
T ss_dssp EHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC------------
T ss_pred CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccc
Confidence 99999964 468999999999999999999998 9999999999999999999999999999765432211 1
Q ss_pred cccccccCchhhhhc---cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 845 PAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~---~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
..+++.|++||+..+ ..++.++|||||||++|||+||+.||.+...... ...........+... ........+
T Consensus 166 ~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~-~~~~~~~~~~~p~~~---~~~~~~~~~ 241 (276)
T d1uwha_ 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIFMVGRGYLSPDLS---KVRSNCPKA 241 (276)
T ss_dssp CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHHTSCCCCGG---GSCTTCCHH
T ss_pred cccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH-HHHHHhcCCCCCcch---hccccchHH
Confidence 234566888998754 3578899999999999999999999875332110 000011111111100 011123356
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
+.+++.+||+.||++||||+||+++|+.++
T Consensus 242 l~~li~~cl~~dp~~RPt~~~il~~Le~l~ 271 (276)
T d1uwha_ 242 MKRLMAECLKKKRDERPLFPQILASIELLA 271 (276)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 778999999999999999999999998774
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-46 Score=393.77 Aligned_cols=241 Identities=17% Similarity=0.223 Sum_probs=198.7
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 7 dy~--i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~iv 84 (263)
T d2j4za1 7 DFE--IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 84 (263)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HeE--EEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEE
Confidence 355 778999999999999995 589999999997532 2356788999999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
||||++|+|.+++.+ .+++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 85 mEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~ 161 (263)
T d2j4za1 85 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 161 (263)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCC
T ss_pred EeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecCCCcc
Confidence 999999999999975 678889999999999999999999 999999999999999999999999999976554333
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
....+++.|++||+..+..++.++||||+||++|||+||+.||.+.... .....+.... ...++ ....++
T Consensus 162 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~s~~~ 231 (263)
T d2j4za1 162 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVE-FTFPD---FVTEGA 231 (263)
T ss_dssp EETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTTC-CCCCT---TSCHHH
T ss_pred cccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHH------HHHHHHHcCC-CCCCc---cCCHHH
Confidence 3344677799999999988999999999999999999999998643211 1111111111 11111 123456
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.+++.+||+.||++|||++|+++
T Consensus 232 ~~li~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 232 RDLISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHccCCHhHCcCHHHHHc
Confidence 78899999999999999999986
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-46 Score=397.60 Aligned_cols=245 Identities=16% Similarity=0.236 Sum_probs=199.6
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
++|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 20 ~~Y~--~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE 97 (293)
T d1yhwa1 20 KKYT--RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (293)
T ss_dssp TTBC--SCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cccE--EEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEE
Confidence 3465 788999999999999984 689999999997643 346678999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--C
Q 002186 767 YLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--S 843 (955)
Q Consensus 767 y~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~ 843 (955)
||++|+|.+++.+ .++..+...|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 98 y~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 174 (293)
T d1yhwa1 98 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (293)
T ss_dssp CCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred ecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeecccccccc
Confidence 9999999998865 568888999999999999999999 999999999999999999999999999986543322 2
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+++.|++||+..+..++.++||||+||++|||+||+.||.+..... ......... .............+.
T Consensus 175 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~------~~~~~~~~~-~~~~~~~~~~s~~~~ 247 (293)
T d1yhwa1 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR------ALYLIATNG-TPELQNPEKLSAIFR 247 (293)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHHC-SCCCSSGGGSCHHHH
T ss_pred ccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH------HHHHHHhCC-CCCCCCcccCCHHHH
Confidence 2336777899999998889999999999999999999999997433211 011111100 000111222345677
Q ss_pred HHHHHccCCCCCCCCCHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+++.+||+.||++|||++|+++
T Consensus 248 ~li~~~L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 248 DFLNRCLDMDVEKRGSAKELLQ 269 (293)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHccCChhHCcCHHHHhc
Confidence 8999999999999999999986
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.1e-46 Score=401.04 Aligned_cols=244 Identities=18% Similarity=0.257 Sum_probs=186.9
Q ss_pred hhhhccCCCCCceEEEeCC-CC---cEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLP-TG---ITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g---~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.||+|+||+||+|+.. +| ..||||++.... ...+.+.+|+++|++++|||||+++|+|.+++..++|||||
T Consensus 30 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~ 109 (299)
T d1jpaa_ 30 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFM 109 (299)
T ss_dssp EEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred EeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEec
Confidence 4678999999999999853 33 368999986532 23567899999999999999999999999999999999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 844 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~- 844 (955)
++|+|.+++.. ..+|.++..|+.|+|+||+|||+. +|+||||||+|||+|.++.+||+|||+++.........
T Consensus 110 ~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~ 186 (299)
T d1jpaa_ 110 ENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 186 (299)
T ss_dssp TTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred CCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEECCCCcEEECCcccceEccCCCCcce
Confidence 99999998876 468999999999999999999998 99999999999999999999999999998654322111
Q ss_pred ------cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 845 ------PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 845 ------~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
..++..|.+||......++.++|||||||++|||+| |+.||.+.... .....+......+.+ .+
T Consensus 187 ~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~------~~~~~i~~~~~~~~~---~~ 257 (299)
T d1jpaa_ 187 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ------DVINAIEQDYRLPPP---MD 257 (299)
T ss_dssp ---------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTTCCCCCC---TT
T ss_pred eeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCCCCC---cc
Confidence 113445788899988899999999999999999998 77787643211 111111111101111 12
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
....+.+++.+||+.||++||||+||++.|+++
T Consensus 258 ~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~ 290 (299)
T d1jpaa_ 258 CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 290 (299)
T ss_dssp CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 335577899999999999999999999999875
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-46 Score=393.65 Aligned_cols=245 Identities=16% Similarity=0.179 Sum_probs=194.2
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 6 dy~--~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE 83 (271)
T d1nvra_ 6 DWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 83 (271)
T ss_dssp EEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceE--EEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence 455 778999999999999995 6899999999975432 24568899999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---
Q 002186 767 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--- 841 (955)
Q Consensus 767 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~--- 841 (955)
||++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+|+......
T Consensus 84 y~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~ 160 (271)
T d1nvra_ 84 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 160 (271)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred ccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeeccCCccc
Confidence 9999999999975 568888999999999999999999 99999999999999999999999999998654322
Q ss_pred -CCCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 -GSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 -~~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
.....+++.|++||+..+..+ +.++||||+||++|||+||+.||.......... . ........ ........
T Consensus 161 ~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~-~----~~~~~~~~--~~~~~~~s 233 (271)
T d1nvra_ 161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-S----DWKEKKTY--LNPWKKID 233 (271)
T ss_dssp CBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHH-H----HHHTTCTT--STTGGGSC
T ss_pred cccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHH-H----HHhcCCCC--CCccccCC
Confidence 112236677899999887765 678999999999999999999997443221100 0 01011000 11112223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.++.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~li~~~L~~dP~~R~t~~eil~h 260 (271)
T d1nvra_ 234 SAPLALLHKILVENPSARITIPDIKKD 260 (271)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 456788999999999999999999763
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.6e-46 Score=395.36 Aligned_cols=248 Identities=18% Similarity=0.256 Sum_probs=198.4
Q ss_pred hcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
+|. ..+.||+|+||+||+|+..+++.||||+++......+.+.+|+.++++++|||||+++|+|.+ +..++|||||+
T Consensus 18 ~~~--i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~ 94 (285)
T d1fmka3 18 SLR--LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 94 (285)
T ss_dssp GEE--EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred HEE--EeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecC
Confidence 355 778899999999999999888899999998766667889999999999999999999999854 56899999999
Q ss_pred CCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-
Q 002186 770 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 844 (955)
Q Consensus 770 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~- 844 (955)
+|+|.+++.. .++|.++..|+.|||+||+|||+. +|+||||||+|||+|.++++||+|||+++.........
T Consensus 95 ~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 171 (285)
T d1fmka3 95 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 171 (285)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred CCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCCCceee
Confidence 9999998864 579999999999999999999998 99999999999999999999999999997654332211
Q ss_pred --cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 845 --PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 845 --~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
..++..|.+||+.....++.++|||||||++|||+||+.|+........ .+..+......... .....++
T Consensus 172 ~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~-----~~~~i~~~~~~~~~---~~~~~~l 243 (285)
T d1fmka3 172 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----VLDQVERGYRMPCP---PECPESL 243 (285)
T ss_dssp ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHHHHTTCCCCCC---TTSCHHH
T ss_pred ccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHH-----HHHHHHhcCCCCCC---cccCHHH
Confidence 2245568889999989999999999999999999998888765433211 11111111001111 1223467
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+++.+||+.||++||||+||+++|+..-
T Consensus 244 ~~li~~cl~~dP~~Rps~~~i~~~L~~~~ 272 (285)
T d1fmka3 244 HDLMCQCWRKEPEERPTFEYLQAFLEDYF 272 (285)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred HHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence 78999999999999999999999998653
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-45 Score=402.42 Aligned_cols=252 Identities=15% Similarity=0.167 Sum_probs=198.0
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
+|. ..+.||+|+||+||+|+ ..+|+.||||+++... ...+.+.+|+++|++++|||||+++++|.+++..|+|||
T Consensus 7 ~y~--~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE 84 (322)
T d1s9ja_ 7 DFE--KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 84 (322)
T ss_dssp GEE--EEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCE--EEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 365 78899999999999999 4689999999997542 235678899999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 767 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 767 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
||++|+|.+++.+ ..++.....++.|+++||+|||+ + +|+||||||+|||++.++.+||+|||+|+........
T Consensus 85 y~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~ 161 (322)
T d1s9ja_ 85 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 161 (322)
T ss_dssp CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC-
T ss_pred cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhC---CEEccccCHHHeeECCCCCEEEeeCCCccccCCCccc
Confidence 9999999999975 57889999999999999999996 5 8999999999999999999999999999866544333
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-ccc-c------------------cc
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLL-G------------------EM 903 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~-~------------------~~ 903 (955)
...++++|++||+..+.+++.++||||+||++|||+||+.||............ ... . ..
T Consensus 162 ~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (322)
T d1s9ja_ 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241 (322)
T ss_dssp --CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC--------------------------
T ss_pred cccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccc
Confidence 445678899999999999999999999999999999999999754321100000 000 0 00
Q ss_pred cccccc------------CCCCc--hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 904 YNENEV------------GSSSS--LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 904 ~~~~~~------------~~~~~--~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+..+. ...+. ......++.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp ----CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 000000 00000 00112467889999999999999999999863
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-45 Score=394.32 Aligned_cols=245 Identities=19% Similarity=0.263 Sum_probs=191.8
Q ss_pred hhhhccCCCCCceEEEeCCC-C----cEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVLPT-G----ITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~-g----~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..++||+|+||+||+|+..+ + ..||||+++... .....+.+|++++++++|||||+++|+|.+.+..++||||
T Consensus 11 ~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~ 90 (283)
T d1mqba_ 11 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY 90 (283)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred eeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEe
Confidence 67889999999999998643 2 479999997543 2345688999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
|.+|++.+.+.. ..+|.++..++.|+|+||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 91 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~ 167 (283)
T d1mqba_ 91 MENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 167 (283)
T ss_dssp CTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred cccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhcccCCCccc
Confidence 999999998764 568999999999999999999998 9999999999999999999999999999865432211
Q ss_pred ----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 844 ----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 844 ----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
...++..|++||+.....++.++|||||||++|||+||+.|+........ ....+.+......+ .+..
T Consensus 168 ~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~-----~~~~i~~~~~~~~~---~~~~ 239 (283)
T d1mqba_ 168 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE-----VMKAINDGFRLPTP---MDCP 239 (283)
T ss_dssp ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHHHTTCCCCCC---TTCB
T ss_pred eEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHH-----HHHHHhccCCCCCc---hhhH
Confidence 11234568899999999999999999999999999998887764432211 11111111111111 1233
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.++.+++.+||+.||++||||+||+++|+++
T Consensus 240 ~~l~~li~~cl~~~p~~RPt~~eil~~L~~l 270 (283)
T d1mqba_ 240 SAIYQLMMQCWQQERARRPKFADIVSILDKL 270 (283)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCCHhHCcCHHHHHHHHHHH
Confidence 5677899999999999999999999999765
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-45 Score=390.69 Aligned_cols=239 Identities=15% Similarity=0.177 Sum_probs=189.6
Q ss_pred hccCCCCCceEEEeC---CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 698 EAARPQSAAGCKAVL---PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~---~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
+||+|+||+||+|+. .++..||||+++... ...+.+.+|+++|++++|||||+++|+|.+ +..|+|||||++|+
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~ 94 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 94 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCc
Confidence 499999999999974 356689999997543 235678999999999999999999999976 46799999999999
Q ss_pred hhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-----CC
Q 002186 773 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-----SF 844 (955)
Q Consensus 773 L~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-----~~ 844 (955)
|.+++.. ..++.++..++.|+|+||+|||+. +|+||||||+|||++.++.+||+|||+++....... ..
T Consensus 95 L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~ 171 (285)
T d1u59a_ 95 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 171 (285)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCS
T ss_pred HHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhcccccccccccccc
Confidence 9999754 468999999999999999999998 999999999999999999999999999986543221 11
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
..++..|.+||+.....++.++|||||||++|||+| |+.||.+..... ....+........++ ....++.
T Consensus 172 ~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~------~~~~i~~~~~~~~p~---~~~~~l~ 242 (285)
T d1u59a_ 172 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGKRMECPP---ECPPELY 242 (285)
T ss_dssp SCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH------HHHHHHTTCCCCCCT---TCCHHHH
T ss_pred cccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---cCCHHHH
Confidence 224455778899888889999999999999999998 888886432211 111111111011111 2234577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
+++.+||+.||++||||.+|++.|+.
T Consensus 243 ~li~~cl~~~p~~RPs~~~i~~~L~~ 268 (285)
T d1u59a_ 243 ALMSDCWIYKWEDRPDFLTVEQRMRA 268 (285)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 89999999999999999999998874
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-45 Score=388.18 Aligned_cols=242 Identities=19% Similarity=0.207 Sum_probs=189.4
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc----CCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~e 766 (955)
..++||+|+||+||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||||++++++.+ ++.+|+|||
T Consensus 13 ~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE 92 (270)
T d1t4ha_ 13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 92 (270)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEe
Confidence 345799999999999995 579999999997543 234568899999999999999999999875 346899999
Q ss_pred ecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-CCCCceECcccccccccccCCC
Q 002186 767 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 767 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
||++|+|.+++.+ ..++.....++.|+++||+|||+. .++|+||||||+|||++ .++.+||+|||+++........
T Consensus 93 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~ 171 (270)
T d1t4ha_ 93 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 171 (270)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred CCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccC
Confidence 9999999999975 578889999999999999999987 22499999999999996 5789999999999865433333
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+++.|++||+... +++.++|||||||++|||+||+.||.+...... ....+.....+. ........++.
T Consensus 172 ~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~--~~~~i~~~~~~~-----~~~~~~~~~~~ 243 (270)
T d1t4ha_ 172 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--IYRRVTSGVKPA-----SFDKVAIPEVK 243 (270)
T ss_dssp ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--HHHHHTTTCCCG-----GGGGCCCHHHH
T ss_pred CcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH--HHHHHHcCCCCc-----ccCccCCHHHH
Confidence 3346677889998865 689999999999999999999999974332111 001111111111 00111234577
Q ss_pred HHHHHccCCCCCCCCCHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+++.+||+.||++|||++|+++
T Consensus 244 ~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 244 EIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHccCCHhHCcCHHHHhC
Confidence 8999999999999999999986
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-45 Score=389.26 Aligned_cols=245 Identities=17% Similarity=0.205 Sum_probs=185.3
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc--CCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~l 763 (955)
.|+ ..+.||+|+||+||+|+ ..+|+.||||+++... ...+.+.+|++++++++|||||++++++.+ ++..|+
T Consensus 5 dy~--~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i 82 (269)
T d2java1 5 DYE--VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 82 (269)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred hCE--EeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence 355 78899999999999998 4689999999997543 235568899999999999999999999975 456899
Q ss_pred EEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCC--CCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 764 LYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDC--YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~--~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
|||||++|+|.+++.+ ..++.....++.|++.||+|||+.. ..+||||||||+|||++.++.+||+|||+++
T Consensus 83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~ 162 (269)
T d2java1 83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 162 (269)
T ss_dssp EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence 9999999999999863 4789999999999999999999862 1259999999999999999999999999998
Q ss_pred cccccCC--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 836 LTQLADG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 836 ~~~~~~~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
....... ....+++.|++||+.....++.++|||||||++|||+||+.||.+.... .....+........+.
T Consensus 163 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~------~~~~~i~~~~~~~~~~ 236 (269)
T d2java1 163 ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK------ELAGKIREGKFRRIPY 236 (269)
T ss_dssp HC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTCCCCCCT
T ss_pred ecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH------HHHHHHHcCCCCCCCc
Confidence 7543322 1223567789999998889999999999999999999999998643211 1111111111111111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....++.+++.+||+.||++|||++|+++
T Consensus 237 ---~~s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 237 ---RYSDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---ccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 22345778899999999999999999975
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-45 Score=392.42 Aligned_cols=241 Identities=16% Similarity=0.182 Sum_probs=189.1
Q ss_pred hhhccCCCCCceEEEeC---CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 696 CEEAARPQSAAGCKAVL---PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~---~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
.++||+|+||+||+|.. .+++.||||+++... ...+.+.+|+++|++++|||||+++|+|.++ ..+||||||+
T Consensus 12 ~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~ 90 (277)
T d1xbba_ 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAE 90 (277)
T ss_dssp EEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEEECCT
T ss_pred CCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEEEcCC
Confidence 35799999999999974 346789999996532 2356789999999999999999999999764 5789999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC----
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---- 843 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~---- 843 (955)
+|+|.++++. .++|..+..|+.|||+||+|||+. +||||||||+|||++.++.+||+|||+++........
T Consensus 91 ~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 167 (277)
T d1xbba_ 91 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167 (277)
T ss_dssp TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC-
T ss_pred CCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhccccccccccc
Confidence 9999999975 568999999999999999999998 9999999999999999999999999999765432211
Q ss_pred -CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 844 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 844 -~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
...++..|++||......++.++|||||||++|||+| |+.||.+.... .....+........+. ....+
T Consensus 168 ~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~------~~~~~i~~~~~~~~p~---~~~~~ 238 (277)
T d1xbba_ 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS------EVTAMLEKGERMGCPA---GCPRE 238 (277)
T ss_dssp ---CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHHHHHHTTCCCCCCT---TCCHH
T ss_pred cccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH------HHHHHHHcCCCCCCCc---ccCHH
Confidence 1224455788899888889999999999999999998 78887643211 0111111111111111 22345
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
+.+++.+||+.||++||||+||+++|+.
T Consensus 239 ~~~li~~cl~~dp~~RPs~~~i~~~L~~ 266 (277)
T d1xbba_ 239 MYDLMNLCWTYDVENRPGFAAVELRLRN 266 (277)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence 7789999999999999999999988864
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-45 Score=388.12 Aligned_cols=245 Identities=20% Similarity=0.273 Sum_probs=188.3
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEc-CCeeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ey~~~gsL 773 (955)
..+.||+|+||.||+|.. .|+.||||+++.. ...+.+.+|++++++++|||||+++|+|.+ ++..++||||+++|+|
T Consensus 11 ~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L 88 (262)
T d1byga_ 11 LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 88 (262)
T ss_dssp EEEEEEECSSCEEEEEEE-TTEEEEEEECCCC-C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEEecCCCeEEEEEEE-CCeEEEEEEECcH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCH
Confidence 667899999999999998 5889999999754 345678899999999999999999999965 4678999999999999
Q ss_pred hHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccccc
Q 002186 774 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 849 (955)
Q Consensus 774 ~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~ 849 (955)
.++++. ..+|..+.+|+.|||.||+|||+. +|+||||||+||+++.++.+|++|||+++......... .+..
T Consensus 89 ~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~-~~~~ 164 (262)
T d1byga_ 89 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-KLPV 164 (262)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-------------CCT
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCCCCccc-cccc
Confidence 999965 379999999999999999999998 99999999999999999999999999998654332222 2344
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
.|.+||+.....++.++|||||||++|||+|++.|+........ ....+..-..+. .+ .....++.+++.+|
T Consensus 165 ~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~--~~~~i~~~~~~~---~~---~~~~~~~~~li~~c 236 (262)
T d1byga_ 165 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKGYKMD---AP---DGCPPAVYEVMKNC 236 (262)
T ss_dssp TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHHHHTTTCCCC---CC---TTCCHHHHHHHHHH
T ss_pred cCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCCCCC---CC---ccCCHHHHHHHHHH
Confidence 57788998888999999999999999999995444443322211 111111111111 11 12234577899999
Q ss_pred cCCCCCCCCCHHHHHHHhhccCCC
Q 002186 930 TRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 930 l~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
|+.||++||||.|++++|+.++.|
T Consensus 237 l~~dP~~Rps~~~l~~~L~~i~~~ 260 (262)
T d1byga_ 237 WHLDAAMRPSFLQLREQLEHIKTH 260 (262)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccCHhHCcCHHHHHHHHHHHHhC
Confidence 999999999999999999988654
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-45 Score=394.06 Aligned_cols=241 Identities=17% Similarity=0.169 Sum_probs=193.2
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..++|||||++|+
T Consensus 16 i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~ 95 (288)
T d2jfla1 16 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGA 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCc
Confidence 678899999999999994 689999999997543 345678899999999999999999999999999999999999999
Q ss_pred hhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC--CCCccc
Q 002186 773 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSFPAK 847 (955)
Q Consensus 773 L~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~--~~~~~~ 847 (955)
|.+++.+ .+++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... .....+
T Consensus 96 L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~G 172 (288)
T d2jfla1 96 VDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIG 172 (288)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCS
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccCCCccccccccc
Confidence 9998754 468899999999999999999999 99999999999999999999999999986543221 112235
Q ss_pred ccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 848 IAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 848 ~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
++.|++||+.. ...++.++||||+||++|||+||+.||.+..... .+..+.... ............++
T Consensus 173 t~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~------~~~~i~~~~-~~~~~~~~~~s~~~ 245 (288)
T d2jfla1 173 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR------VLLKIAKSE-PPTLAQPSRWSSNF 245 (288)
T ss_dssp CCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG------HHHHHHHSC-CCCCSSGGGSCHHH
T ss_pred ccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH------HHHHHHcCC-CCCCCccccCCHHH
Confidence 66688899873 4457899999999999999999999987543211 111111111 00111122334567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.+++.+||+.||++|||++|+++
T Consensus 246 ~~li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 246 KDFLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHccCChhHCcCHHHHhc
Confidence 78999999999999999999986
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.8e-45 Score=393.10 Aligned_cols=250 Identities=17% Similarity=0.172 Sum_probs=187.7
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 762 (955)
++.+.|. ..+.||+|+||+||+|+. .+|+.||||++..... ..+.+.+|+++|++++|||||++++++.+++..|
T Consensus 6 di~d~Y~--~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 83 (307)
T d1a06a_ 6 DIRDIYD--FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 83 (307)
T ss_dssp CGGGTEE--EEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred CCccceE--EEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 4445566 788999999999999995 5899999999975432 2456788999999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC---CCCCceECcccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD---ENMEPHLAEFGFKYLT 837 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~---~~~~~ki~DfGl~~~~ 837 (955)
+|||||++|+|.+++.. .+++.+...++.|++.||+|||+. +|+||||||+||++. .++.+||+|||+++..
T Consensus 84 lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~ 160 (307)
T d1a06a_ 84 LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 160 (307)
T ss_dssp EEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC------
T ss_pred EEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEc
Confidence 99999999999999975 568889999999999999999999 999999999999994 5789999999999865
Q ss_pred cccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 838 QLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 838 ~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
..... ....+++.|++||+..+..++.++||||+||++|||+||+.||.+..... ....+.........+...
T Consensus 161 ~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 234 (307)
T d1a06a_ 161 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK------LFEQILKAEYEFDSPYWD 234 (307)
T ss_dssp ------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHTTCCCCCTTTTT
T ss_pred cCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHH------HHHHHhccCCCCCCcccc
Confidence 43322 22336677899999998899999999999999999999999997432111 111111111011111112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....++.+++.+||+.||++|||++|++++
T Consensus 235 ~~s~~~~~li~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 235 DISDSAKDFIRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 334567889999999999999999999874
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.3e-45 Score=395.30 Aligned_cols=249 Identities=21% Similarity=0.262 Sum_probs=200.2
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
+|+ ..+.||+|+||+||+|+. .+++.||||+++.... ..+.+.+|++++++++|||||+++|+|.+.+..
T Consensus 14 ~~~--~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~ 91 (301)
T d1lufa_ 14 NIE--YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 91 (301)
T ss_dssp GCE--EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HcE--EeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCce
Confidence 365 788999999999999974 3568999999976433 356789999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--------------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCC
Q 002186 762 YLLYDYLPNGNLSEKIRT--------------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKA 815 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--------------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~ 815 (955)
++||||+++|+|.++++. .++|.++..|+.|+|.||+|||+. +||||||||
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivHrDlKp 168 (301)
T d1lufa_ 92 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLAT 168 (301)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEeeEEcc
Confidence 999999999999999863 257889999999999999999998 999999999
Q ss_pred CCeeeCCCCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCC
Q 002186 816 SNIVFDENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL 891 (955)
Q Consensus 816 ~NiLl~~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~ 891 (955)
+|||+|.++.+||+|||+++........ ...++..|++||+.....++.++||||||||+|||+||+.|+..+...
T Consensus 169 ~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~ 248 (301)
T d1lufa_ 169 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 248 (301)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred cceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCH
Confidence 9999999999999999999765433221 223456688999999999999999999999999999997654433221
Q ss_pred CCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 892 QNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.. ....+.+......+ ...+.++.+++.+||+.||++||||.||+++|++|.
T Consensus 249 ~e-----~~~~v~~~~~~~~p---~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 249 EE-----VIYYVRDGNILACP---ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp HH-----HHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HH-----HHHHHHcCCCCCCC---ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 11 11111111111111 122346778999999999999999999999999875
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-44 Score=390.29 Aligned_cols=254 Identities=20% Similarity=0.236 Sum_probs=193.4
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCC----eeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv~ey~~~ 770 (955)
..+.||+|+||.||+|+. +|+.||||+++.........+.|+..+.+++|||||+++|+|.+++ .+++|||||++
T Consensus 7 l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~ 85 (303)
T d1vjya_ 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECCSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccC
Confidence 567799999999999996 7899999999755444334455666677899999999999998654 68999999999
Q ss_pred CChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcC-----CCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--
Q 002186 771 GNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHD-----CYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 842 (955)
Q Consensus 771 gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~-----~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-- 842 (955)
|+|.++|++ ..+|.++.+++.|+|.||+|+|+. ..++||||||||+|||+|.++.+||+|||+++.......
T Consensus 86 g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~ 165 (303)
T d1vjya_ 86 GSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 165 (303)
T ss_dssp CBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEE
T ss_pred CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcce
Confidence 999999986 679999999999999999999974 245999999999999999999999999999876543321
Q ss_pred ----CCcccccccCchhhhhcc------CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc---------cccc--
Q 002186 843 ----SFPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID---------GLLG-- 901 (955)
Q Consensus 843 ----~~~~~~~~~~~~e~~~~~------~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~---------~~~~-- 901 (955)
....+++.|.+||+.... .++.++|||||||++|||+||..|+........ +.. ....
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 244 (303)
T d1vjya_ 166 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL-PYYDLVPSDPSVEEMRKV 244 (303)
T ss_dssp CC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCC-TTTTTSCSSCCHHHHHHH
T ss_pred eccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCccccccc-chhhcccccchHHHHHHH
Confidence 112356678899987653 357789999999999999999887753221110 000 0000
Q ss_pred ---ccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 902 ---EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 902 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
+..++. .+......+....+.+++.+||+.||++||||.||+++|+++.
T Consensus 245 ~~~~~~~p~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~ 296 (303)
T d1vjya_ 245 VCEQKLRPN-IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp HTTSCCCCC-CCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccccCCC-CCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 111111 1001112345567889999999999999999999999998764
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-45 Score=397.29 Aligned_cols=243 Identities=18% Similarity=0.196 Sum_probs=192.3
Q ss_pred hhhhccCCCCCceEEEeCC-C-----CcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLP-T-----GITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~-----g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||+||+|+.. + +..||||++.... .....+.+|++++.++ +|||||+++|+|.+++..++||
T Consensus 41 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 120 (325)
T d1rjba_ 41 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 120 (325)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred EeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEE
Confidence 6788999999999999842 2 3479999986532 2355788899999998 8999999999999999999999
Q ss_pred eecCCCChhHHhhcC-------------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 766 DYLPNGNLSEKIRTK-------------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 766 ey~~~gsL~~~l~~~-------------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
|||++|+|.++|+.. ++|..+..|+.|+++||+|||+. +||||||||+||++
T Consensus 121 Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlKp~Nill 197 (325)
T d1rjba_ 121 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLV 197 (325)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGEEE
T ss_pred EcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCchhcccc
Confidence 999999999999642 57888999999999999999998 99999999999999
Q ss_pred CCCCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
+.++.+||+|||+|+........ ...+++.|++||+.....++.++|||||||++|||+| |+.||.+..... .
T Consensus 198 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~--~ 275 (325)
T d1rjba_ 198 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA--N 275 (325)
T ss_dssp ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--H
T ss_pred ccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH--H
Confidence 99999999999999865443322 1224566888999988899999999999999999998 788876432211 1
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 948 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~ 948 (955)
....+...... ..+. ....++.+++.+||+.||++||||+||+++|.
T Consensus 276 ~~~~~~~~~~~---~~p~---~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 276 FYKLIQNGFKM---DQPF---YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp HHHHHHTTCCC---CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhcCCCC---CCCC---cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 11111111111 1111 22346778999999999999999999999985
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=2e-44 Score=396.14 Aligned_cols=252 Identities=19% Similarity=0.233 Sum_probs=202.4
Q ss_pred hhhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 684 ANDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 684 ~~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
...+.++|. ..+.||+|+||+||+|+. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..
T Consensus 21 ~~~il~~Y~--i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~ 98 (350)
T d1koaa2 21 HDHVLDHYD--IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM 98 (350)
T ss_dssp CSCGGGTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEE
T ss_pred CCCCccCeE--EEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 345566777 788999999999999984 689999999997543 3456788999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC--CCCCceECccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--ENMEPHLAEFGFKYL 836 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~--~~~~~ki~DfGl~~~ 836 (955)
|+|||||++|+|.+++.. .+++.+...|+.||+.||+|||+. +||||||||+|||++ .++.+||+|||+++.
T Consensus 99 ~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~ 175 (350)
T d1koaa2 99 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 175 (350)
T ss_dssp EEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchhee
Confidence 999999999999999954 468999999999999999999999 999999999999996 457899999999986
Q ss_pred ccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 837 TQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 837 ~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
....... ...++++|++||+..+..++.++||||+||++|||+||+.||.+.... ..+..+............
T Consensus 176 ~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~~~~~~ 249 (350)
T d1koaa2 176 LDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD------ETLRNVKSCDWNMDDSAF 249 (350)
T ss_dssp CCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCSCCGGG
T ss_pred cccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCCCCcccc
Confidence 5443322 223667799999999989999999999999999999999998643211 111111111101111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.....++.+++.+||+.||++|||++|++++
T Consensus 250 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 250 SGISEDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp GGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2234567789999999999999999999885
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-44 Score=385.31 Aligned_cols=250 Identities=17% Similarity=0.184 Sum_probs=199.3
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-------chHHHHHHHHHHHhccCCCCceeEeEEEEc
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-------TRIKIVSEFITRIGTVRHKNLIRLLGFCYN 757 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 757 (955)
++.+.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.+
T Consensus 7 ~i~d~Y~--~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~ 84 (293)
T d1jksa_ 7 NVDDYYD--TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 84 (293)
T ss_dssp CGGGTEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CcccCEE--EeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence 3444566 788999999999999995 689999999996532 125678999999999999999999999999
Q ss_pred CCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC----CceECcc
Q 002186 758 RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEF 831 (955)
Q Consensus 758 ~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~----~~ki~Df 831 (955)
++..|+|||||++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++ .+|++||
T Consensus 85 ~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~Df 161 (293)
T d1jksa_ 85 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 161 (293)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCC
T ss_pred CCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecch
Confidence 9999999999999999999965 578889999999999999999999 999999999999998776 4999999
Q ss_pred cccccccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 832 GFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 832 Gl~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
|+++....... ....+++.|.+||+..+..++.++||||+||++|||+||+.||.+..... ....+.......
T Consensus 162 G~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~------~~~~i~~~~~~~ 235 (293)
T d1jksa_ 162 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANVSAVNYEF 235 (293)
T ss_dssp TTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHTTCCCC
T ss_pred hhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHH------HHHHHHhcCCCC
Confidence 99976543322 22335667889999998889999999999999999999999987432111 111111111000
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...........+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 236 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000111233567789999999999999999999863
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.4e-44 Score=388.75 Aligned_cols=241 Identities=20% Similarity=0.235 Sum_probs=193.2
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+.|+ ..+.||+|+||+||+|+ ..+|+.||||+++.... ..+.+.+|+++|++++|||||+++|++.+++..|+
T Consensus 15 ~~y~--~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 92 (309)
T d1u5ra_ 15 KLFS--DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL 92 (309)
T ss_dssp HHEE--EEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred HhcE--eeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEE
Confidence 3466 78899999999999998 56899999999975432 24568899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
|||||++|++..++.. .+++.+...++.||++||+|||+. +||||||||+|||++.++.+||+|||+++.....
T Consensus 93 v~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~- 168 (309)
T d1u5ra_ 93 VMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (309)
T ss_dssp EEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred EEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCCC-
Confidence 9999999999776643 578999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCcccccccCchhhhhc---cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccc-cCCCCchHH
Q 002186 842 GSFPAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE-VGSSSSLQD 917 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~~---~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 917 (955)
....+++.|++||+..+ ..++.++|||||||++|||+||+.||.+..... .+..+..... ..... .
T Consensus 169 -~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~------~~~~i~~~~~~~~~~~---~ 238 (309)
T d1u5ra_ 169 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQNESPALQSG---H 238 (309)
T ss_dssp -CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSCCCCCSCT---T
T ss_pred -CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCCCCCCCCC---C
Confidence 22346677899998753 358889999999999999999999987432211 1111111110 00011 1
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....+.+++.+||+.||++|||++|+++
T Consensus 239 ~s~~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 239 WSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence 2345778899999999999999999975
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-44 Score=386.58 Aligned_cols=245 Identities=20% Similarity=0.228 Sum_probs=192.6
Q ss_pred hhhccCCCCCceEEEeCCC----CcEEEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEc-CCeeEEEEeec
Q 002186 696 CEEAARPQSAAGCKAVLPT----GITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYDYL 768 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~----g~~vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ey~ 768 (955)
.++||+|+||+||+|+..+ ...||||+++.. ....+.+.+|++++++++|||||+++|+|.+ ++..++|||||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~ 111 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence 4679999999999998643 236999999742 3345679999999999999999999999875 56899999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
++|+|.++++. ..++..+.+++.|+|+||.|+|+. +|+||||||+|||+|+++.+||+|||+++........
T Consensus 112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~ 188 (311)
T d1r0pa_ 112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 188 (311)
T ss_dssp TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT
T ss_pred ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhccccccccc
Confidence 99999999876 346888999999999999999999 9999999999999999999999999999765432211
Q ss_pred ----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 844 ----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 844 ----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
...++..|.+||......++.++|||||||++|||+||+.||.......... ..+........++ ...
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~-----~~i~~g~~~~~p~---~~~ 260 (311)
T d1r0pa_ 189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-----VYLLQGRRLLQPE---YCP 260 (311)
T ss_dssp TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CH-----HHHHTTCCCCCCT---TCC
T ss_pred eecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHH-----HHHHcCCCCCCcc---cCc
Confidence 1224456788899888899999999999999999999999887543322111 1111111111111 123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
..+.+++.+||+.||++||||+||+++|+++.
T Consensus 261 ~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~ 292 (311)
T d1r0pa_ 261 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 292 (311)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 45778999999999999999999999998764
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-44 Score=385.35 Aligned_cols=239 Identities=18% Similarity=0.167 Sum_probs=194.5
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 10 y~--i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 10 FK--FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp EE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 55 788999999999999985 689999999997532 23567889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
|||++|+|.+++.. ..++.....++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++.......
T Consensus 88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~ 164 (288)
T d1uu3a_ 88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164 (288)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence 99999999998875 568888999999999999999999 999999999999999999999999999986543221
Q ss_pred ---CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 843 ---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 843 ---~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
....+++.|++||+..+..++.++||||+||++|||+||+.||...... .....+.... ...+. ...
T Consensus 165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~s 234 (288)
T d1uu3a_ 165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEY------LIFQKIIKLE-YDFPE---KFF 234 (288)
T ss_dssp -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHTTC-CCCCT---TCC
T ss_pred cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHH------HHHHHHHcCC-CCCCc---cCC
Confidence 1223667799999999989999999999999999999999999743211 1111111111 11111 123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEAL 944 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~ 944 (955)
.++.+++.+||+.||++|||++|+.
T Consensus 235 ~~~~~li~~~L~~dP~~R~t~~e~~ 259 (288)
T d1uu3a_ 235 PKARDLVEKLLVLDATKRLGCEEME 259 (288)
T ss_dssp HHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHc
Confidence 4577899999999999999999864
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=4.4e-44 Score=393.75 Aligned_cols=250 Identities=18% Similarity=0.192 Sum_probs=200.2
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.+.+.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..|+
T Consensus 26 ~~~d~Y~--i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 103 (352)
T d1koba_ 26 SVYDYYD--ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 103 (352)
T ss_dssp CGGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred CcccceE--EEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 3445566 888999999999999994 689999999997643 335567899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC--CCCCceECccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--ENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~--~~~~~ki~DfGl~~~~~ 838 (955)
|||||++|+|.+.+.. .+++.+...|+.||++||+|||+. +||||||||+|||++ .++.+||+|||+++...
T Consensus 104 vmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~ 180 (352)
T d1koba_ 104 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 180 (352)
T ss_dssp EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecC
Confidence 9999999999998764 468888999999999999999999 999999999999998 57899999999998765
Q ss_pred ccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 839 LADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 839 ~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
..... ...++++|++||+..+..++.++||||+||++|||+||+.||.+..... .+..+..............
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~~ 254 (352)
T d1koba_ 181 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE------TLQNVKRCDWEFDEDAFSS 254 (352)
T ss_dssp TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHHCCCCCCSSTTTT
T ss_pred CCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCCCCcccccC
Confidence 43322 2235667889999999899999999999999999999999997433211 1111111110000111122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...++.+++.+||+.||++|||++|++++
T Consensus 255 ~s~~~~~li~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 255 VSPEAKDFIKNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 33567789999999999999999999874
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-44 Score=386.87 Aligned_cols=248 Identities=23% Similarity=0.300 Sum_probs=194.4
Q ss_pred cccchhhhccCCCCCceEEEeCC-CCc--EEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAVLP-TGI--TVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~~-~g~--~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 764 (955)
|. ..+.||+|+||+||+|+.. +|. .||||+++... ...+.+.+|+++|+++ +|||||+++|+|.+++..++|
T Consensus 12 ~~--~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV 89 (309)
T d1fvra_ 12 IK--FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 89 (309)
T ss_dssp CE--EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred cE--EEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence 55 5678999999999999864 554 57888886432 2345788999999998 799999999999999999999
Q ss_pred EeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCc
Q 002186 765 YDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ 826 (955)
|||+++|+|.++|+. .++|.++.+++.|||+||.|+|+. +|+||||||+|||++.++.+
T Consensus 90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 166 (309)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCCce
Confidence 999999999999964 368999999999999999999999 99999999999999999999
Q ss_pred eECcccccccccccCCCC-cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccc
Q 002186 827 HLAEFGFKYLTQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 827 ki~DfGl~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
||+|||+++......... ..++..|.+||......++.++|||||||++|||+||+.|+..+..... ....+..
T Consensus 167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~-----~~~~i~~ 241 (309)
T d1fvra_ 167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----LYEKLPQ 241 (309)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHGGG
T ss_pred EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHh
Confidence 999999987654333222 2245557888988888899999999999999999998876554332111 1111111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
......+ .....++.+++.+||+.||++||||+||++.|+++.
T Consensus 242 ~~~~~~~---~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~ 284 (309)
T d1fvra_ 242 GYRLEKP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 284 (309)
T ss_dssp TCCCCCC---TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCC---ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1101111 122346778899999999999999999999998764
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-43 Score=376.93 Aligned_cols=244 Identities=16% Similarity=0.188 Sum_probs=185.4
Q ss_pred hhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.||+|+||+||+|+.. .+..||||+++... ...+.+.+|++++++++|||||+++|+|. ++..++|||||
T Consensus 11 l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~~ 89 (273)
T d1mp8a_ 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 89 (273)
T ss_dssp EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEec
Confidence 6788999999999999853 34579999986532 23567899999999999999999999995 46789999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 842 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--- 842 (955)
++|++.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~ 166 (273)
T d1mp8a_ 90 TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 166 (273)
T ss_dssp TTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------------
T ss_pred cCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheeccCCcceec
Confidence 99999998754 468999999999999999999999 999999999999999999999999999976543221
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
....++.+|++||......++.++|||||||++|||+| |..|+..... .. ....+........++ .....
T Consensus 167 ~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~-~~-----~~~~i~~~~~~~~~~---~~~~~ 237 (273)
T d1mp8a_ 167 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-ND-----VIGRIENGERLPMPP---NCPPT 237 (273)
T ss_dssp ----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-GG-----HHHHHHTTCCCCCCT---TCCHH
T ss_pred cceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCH-HH-----HHHHHHcCCCCCCCC---CCCHH
Confidence 12224567889999998899999999999999999998 6666653321 11 111111111111111 22345
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
+.+++.+||+.||++||||+||++.|+.+.
T Consensus 238 ~~~li~~cl~~dp~~Rps~~ei~~~L~~i~ 267 (273)
T d1mp8a_ 238 LYSLMTKCWAYDPSRRPRFTELKAQLSTIL 267 (273)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 778999999999999999999999998764
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-43 Score=381.19 Aligned_cols=249 Identities=22% Similarity=0.236 Sum_probs=185.4
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcC-C
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR-H 759 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~-~ 759 (955)
+|. ..+.||+|+||+||+|+. .+++.||||+++... ...+.+.+|++.+.++ +|+|||++++++.++ +
T Consensus 14 ~y~--~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~ 91 (299)
T d1ywna1 14 RLK--LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 91 (299)
T ss_dssp GEE--EEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred HEE--EeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence 355 778999999999999973 356789999997543 2345667777777776 689999999998764 4
Q ss_pred eeEEEEeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC
Q 002186 760 QAYLLYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~ 821 (955)
..++|||||++|+|.++++. .+++.++..++.|+|+||+|||+. +||||||||+|||++
T Consensus 92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl~ 168 (299)
T d1ywna1 92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS 168 (299)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeEC
Confidence 68999999999999999964 257889999999999999999998 999999999999999
Q ss_pred CCCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc
Q 002186 822 ENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID 897 (955)
Q Consensus 822 ~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~ 897 (955)
.++.+||+|||+++........ ...+++.|++||+.....++.++|||||||++|||+||+.|++.+........
T Consensus 169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~- 247 (299)
T d1ywna1 169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC- 247 (299)
T ss_dssp GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHH-
T ss_pred CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHH-
Confidence 9999999999999765433221 22356678899999999999999999999999999998765443322211111
Q ss_pred ccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 898 GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
..+.+...+. .+ .....++.+++.+||+.||++||||+||+++|+++
T Consensus 248 ~~~~~~~~~~---~~---~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~i 294 (299)
T d1ywna1 248 RRLKEGTRMR---AP---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294 (299)
T ss_dssp HHHHHTCCCC---CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcCCCCC---CC---ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111111111 11 12234577899999999999999999999999875
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-44 Score=387.45 Aligned_cols=248 Identities=17% Similarity=0.192 Sum_probs=198.7
Q ss_pred HhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
+.++|. ..+.||+|+||+||+|.. .+|+.||||.++........+.+|+++|++++|||||++++++++++..|+||
T Consensus 3 ~~~rY~--i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvm 80 (321)
T d1tkia_ 3 LYEKYM--IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp CTTTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred CccceE--EEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 345566 788999999999999985 58999999999876666667889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC--CCCceECccccccccccc
Q 002186 766 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 766 ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~--~~~~ki~DfGl~~~~~~~ 840 (955)
|||++|+|.+++.. .+++.+...|+.|+++||+|||+. +|+||||||+|||++. ...+||+|||+++.....
T Consensus 81 E~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~ 157 (321)
T d1tkia_ 81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred ecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhccccC
Confidence 99999999999975 457888899999999999999999 9999999999999985 457999999998765432
Q ss_pred CCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 841 DGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 841 ~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
... ...++++|.+||......++.++||||+||++|||+||+.||...... .....+................
T Consensus 158 ~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~------~~~~~i~~~~~~~~~~~~~~~s 231 (321)
T d1tkia_ 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ------QIIENIMNAEYTFDEEAFKEIS 231 (321)
T ss_dssp CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTCCCCCHHHHTTSC
T ss_pred CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCCCChhhccCCC
Confidence 211 223556678888888888999999999999999999999998743311 1111121111010001111234
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.++.+++.+|++.||++|||++|+++
T Consensus 232 ~~~~~li~~~L~~dp~~R~s~~eil~ 257 (321)
T d1tkia_ 232 IEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 56789999999999999999999987
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-43 Score=377.17 Aligned_cols=246 Identities=19% Similarity=0.234 Sum_probs=185.6
Q ss_pred cccchhhhccCCCCCceEEEeC--CCC--cEEEEEEeecc----cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeE
Q 002186 691 FNSTECEEAARPQSAAGCKAVL--PTG--ITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~--~~g--~~vAvK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 762 (955)
|. ..+.||+|+||+||+|+. .++ ..||||+++.. ....+.+.+|++++++++|||||+++|+|.+ +..+
T Consensus 10 ~~--~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~ 86 (273)
T d1u46a_ 10 LR--LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK 86 (273)
T ss_dssp EE--EEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred eE--EEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence 55 778899999999999984 333 47899998753 2235678999999999999999999999976 4678
Q ss_pred EEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
+|||||++|++.+.+.. .+++..+.+++.|+|+||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhccc
Confidence 99999999999988754 579999999999999999999998 999999999999999999999999999986543
Q ss_pred cCCC-----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 840 ADGS-----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 840 ~~~~-----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
.... ...+..++.+||......++.++|||||||++|||+| |+.||.+.... .....+...... .+
T Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~------~~~~~i~~~~~~--~~ 235 (273)
T d1u46a_ 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------QILHKIDKEGER--LP 235 (273)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTSCCC--CC
T ss_pred CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH------HHHHHHHhCCCC--CC
Confidence 3221 1223445778899988899999999999999999998 78887532211 111111111100 01
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
........+.+++.+||+.||++||||+||++.|++.
T Consensus 236 ~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 236 RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1112234577899999999999999999999999864
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-43 Score=379.00 Aligned_cols=251 Identities=17% Similarity=0.225 Sum_probs=199.4
Q ss_pred hcccchhhhccCCCCCceEEEeCC------CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
+|. ..+.||+|+||.||+|+.. +++.||||+++.... ....+.+|++++++++|||||+++|+|..++..
T Consensus 21 ~~~--l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~ 98 (308)
T d1p4oa_ 21 KIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 98 (308)
T ss_dssp GEE--EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred HeE--EeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence 355 6788999999999999852 467899999975332 345688999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 762 YLLYDYLPNGNLSEKIRT------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
++|||||++|+|.++++. ..+|..+.+++.|+|+||+|||+. +|+||||||+|||+|.++++||+
T Consensus 99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl~ 175 (308)
T d1p4oa_ 99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 175 (308)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEEC
T ss_pred eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEEe
Confidence 999999999999999864 247889999999999999999998 99999999999999999999999
Q ss_pred cccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccc
Q 002186 830 EFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 830 DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
|||+++........ ...+++.|.+||......++.++|||||||++|||+||+.|+..+.... .....+.+
T Consensus 176 DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~-----~~~~~i~~ 250 (308)
T d1p4oa_ 176 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-----QVLRFVME 250 (308)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-----HHHHHHHT
T ss_pred ecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHh
Confidence 99999765433221 1124456788898888889999999999999999999976554333211 11112222
Q ss_pred ccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
......+. .....+.+++.+||+.||++||||+||+++|++..+.
T Consensus 251 ~~~~~~p~---~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~ 295 (308)
T d1p4oa_ 251 GGLLDKPD---NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 295 (308)
T ss_dssp TCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred CCCCCCcc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 22111111 2234678899999999999999999999999876543
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-43 Score=383.06 Aligned_cols=244 Identities=18% Similarity=0.246 Sum_probs=188.8
Q ss_pred chhhhccCCCCCceEEEeC-CCCc----EEEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 694 TECEEAARPQSAAGCKAVL-PTGI----TVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~~-~~g~----~vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
...+.||+|+||+||+|+. .+|+ .||||+++.. ....+.+.+|++++++++|||||+++|+|.++ ..++|||
T Consensus 12 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~e 90 (317)
T d1xkka_ 12 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQ 90 (317)
T ss_dssp EEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEE
T ss_pred EEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEEE
Confidence 3889999999999999984 4554 6899988643 23467889999999999999999999999875 5678899
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
|+.+|+|.+.+.. ..++..+.+++.|||+||+|||+. +||||||||+|||++.++.+||+|||+++........
T Consensus 91 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~ 167 (317)
T d1xkka_ 91 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 167 (317)
T ss_dssp CCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC-
T ss_pred eccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceeccccccc
Confidence 9999999998865 568999999999999999999998 9999999999999999999999999999865433222
Q ss_pred C----cccccccCchhhhhccCCcccccchhHHHHHHHHHhC-CCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 844 F----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN-GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 844 ~----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
. ..++..|.+||+.....++.++|||||||++|||+|+ +.|+. +..... ....+. .......++ ..
T Consensus 168 ~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~-~~~~~~--~~~~i~---~~~~~~~p~---~~ 238 (317)
T d1xkka_ 168 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE--ISSILE---KGERLPQPP---IC 238 (317)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT-TSCGGG--HHHHHH---HTCCCCCCT---TB
T ss_pred ccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCC-CCCHHH--HHHHHH---cCCCCCCCc---cc
Confidence 1 1245568899999888999999999999999999994 55554 322111 111111 111011111 22
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
...+.+++.+||+.||++||||+||+++|+.+
T Consensus 239 ~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~ 270 (317)
T d1xkka_ 239 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270 (317)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCChhhCcCHHHHHHHHHHH
Confidence 34577899999999999999999999988765
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=7.1e-43 Score=371.38 Aligned_cols=246 Identities=21% Similarity=0.232 Sum_probs=194.2
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----------hHHHHHHHHHHHhccC-CCCceeEeEEEEc
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----------RIKIVSEFITRIGTVR-HKNLIRLLGFCYN 757 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----------~~~~~~~e~~~l~~l~-H~niv~l~g~~~~ 757 (955)
+|+ ..+.||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|++++++++ |||||++++++.+
T Consensus 4 ~y~--~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 4 NYE--PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cCE--EceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 355 788999999999999984 6899999999975321 1345788999999997 9999999999999
Q ss_pred CCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 758 RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 758 ~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
++..|||||||++|||.++|+. ..++.+...++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSC 158 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchhee
Confidence 9999999999999999999964 678999999999999999999999 99999999999999999999999999998
Q ss_pred cccccCC-CCcccccccCchhhhhc------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccc
Q 002186 836 LTQLADG-SFPAKIAWTESGEFYNA------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE 908 (955)
Q Consensus 836 ~~~~~~~-~~~~~~~~~~~~e~~~~------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (955)
....... ....++..+.+||+..+ ..++.++||||+||++|||+||+.||.+..... ....+.....
T Consensus 159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~------~~~~i~~~~~ 232 (277)
T d1phka_ 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML------MLRMIMSGNY 232 (277)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCC
T ss_pred EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHH------HHHHHHhCCC
Confidence 6543322 12224555778887653 346788999999999999999999997543111 1111111110
Q ss_pred cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 909 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+.......++.+++.+||+.||++|||++||+++
T Consensus 233 ~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 233 QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 11111222344568899999999999999999999764
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.7e-43 Score=378.31 Aligned_cols=254 Identities=16% Similarity=0.145 Sum_probs=196.6
Q ss_pred hhhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCC---
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--- 759 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--- 759 (955)
.++|. ..+.||+|+||+||+|+ ..+|+.||||+++.... ..+.+.+|++++++++|||||++++++..++
T Consensus 6 ~drY~--i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~ 83 (277)
T d1o6ya_ 6 SDRYE--LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG 83 (277)
T ss_dssp TTTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSS
T ss_pred cceeE--EeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCC
Confidence 34566 77899999999999998 46899999999975322 2456889999999999999999999998643
Q ss_pred -eeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 760 -QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 760 -~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
..|+|||||++|+|.+++.. .+++.+...++.|+++||+|||+. +|+||||||+|||++.++..+++|||.++.
T Consensus 84 ~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~ 160 (277)
T d1o6ya_ 84 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 160 (277)
T ss_dssp EEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEE
T ss_pred ceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhh
Confidence 47999999999999998865 578999999999999999999998 999999999999999999999999998765
Q ss_pred ccccCC-----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCC
Q 002186 837 TQLADG-----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 911 (955)
Q Consensus 837 ~~~~~~-----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (955)
...... ....+++.|++||...+..++.++||||+||++|||+||+.||....... .........+...
T Consensus 161 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~~~~~~~~~~ 234 (277)
T d1o6ya_ 161 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------VAYQHVREDPIPP 234 (277)
T ss_dssp CC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCCCCCG
T ss_pred hccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHH------HHHHHHhcCCCCC
Confidence 432211 12235677899999988889999999999999999999999987432111 1111111110100
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhhccCC
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRP-SMEEALKLLSGLKP 952 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RP-t~~ev~~~L~~~~~ 952 (955)
.........++.+++.+||+.||++|| |++|+.+.|.+++.
T Consensus 235 ~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n 276 (277)
T d1o6ya_ 235 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276 (277)
T ss_dssp GGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred chhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence 011112235677889999999999999 89999999987754
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-43 Score=380.93 Aligned_cols=246 Identities=19% Similarity=0.242 Sum_probs=196.9
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||.||+|+. .+++.||||+++.... ....+.+|+++++++ +|||||+++|+|.+++..++||
T Consensus 27 l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvm 106 (311)
T d1t46a_ 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (311)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred EeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEE
Confidence 677899999999999973 4678999999976432 355688999999998 6999999999999999999999
Q ss_pred eecCCCChhHHhhc--------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC
Q 002186 766 DYLPNGNLSEKIRT--------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825 (955)
Q Consensus 766 ey~~~gsL~~~l~~--------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~ 825 (955)
|||++|+|.++++. .+++..+..++.|||+|++|||+. +||||||||+||+++.++.
T Consensus 107 E~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl~~~~~~ 183 (311)
T d1t46a_ 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRI 183 (311)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETTTE
T ss_pred EcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccccccccccccCc
Confidence 99999999999875 257889999999999999999999 9999999999999999999
Q ss_pred ceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccc
Q 002186 826 PHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLG 901 (955)
Q Consensus 826 ~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~ 901 (955)
+|++|||+++........ ...+++.|.+||+.....++.++|||||||++|||+|++.|+......... +.
T Consensus 184 ~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~-----~~ 258 (311)
T d1t46a_ 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FY 258 (311)
T ss_dssp EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-----HH
T ss_pred ccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH-----HH
Confidence 999999999865433221 122455678889998889999999999999999999977776644432211 11
Q ss_pred ccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 902 EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+++........+ ......+.+++.+||+.||++||||+||+++|+++
T Consensus 259 ~~i~~~~~~~~~--~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~ 305 (311)
T d1t46a_ 259 KMIKEGFRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (311)
T ss_dssp HHHHHTCCCCCC--TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcCCCCCCc--ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence 111111010011 12234577899999999999999999999999864
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-42 Score=378.73 Aligned_cols=242 Identities=12% Similarity=0.077 Sum_probs=196.6
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||++++.. ...+.+.+|+++|++++|||||++++++++++..|+|
T Consensus 6 dy~--~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 6 DFD--YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcE--EEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 365 788999999999999994 689999999997532 2356678999999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
||||++|+|.+++.+ ..+......++.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+.......
T Consensus 84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~ 160 (337)
T d1o6la_ 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccccCCc
Confidence 999999999999976 457777788999999999999999 999999999999999999999999999986533222
Q ss_pred --CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 843 --SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 843 --~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
....++++|.+||+..+..++.++||||+||++|||+||+.||.+.... .....+.... ...+. ....
T Consensus 161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~------~~~~~i~~~~-~~~p~---~~s~ 230 (337)
T d1o6la_ 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------RLFELILMEE-IRFPR---TLSP 230 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSCH
T ss_pred ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH------HHHHHHhcCC-CCCCc---cCCH
Confidence 2234678899999999999999999999999999999999998753311 1111111111 11111 1234
Q ss_pred HHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 002186 921 LVLDVALLCTRSTPSDRPS-----MEEALKL 946 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt-----~~ev~~~ 946 (955)
++.+++.+||+.||++||+ ++|++++
T Consensus 231 ~~~dli~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence 5678999999999999995 8888763
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-43 Score=376.77 Aligned_cols=248 Identities=21% Similarity=0.255 Sum_probs=189.8
Q ss_pred hcccchhhhccCCCCCceEEEeC--------CCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNR 758 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~--------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 758 (955)
+|. ..+.||+|+||.||+|+. .++..||||+++.... ...++.+|+..+.++ +|||||+++|+|.++
T Consensus 14 ~~~--l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~ 91 (299)
T d1fgka_ 14 RLV--LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 91 (299)
T ss_dssp GEE--EEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HeE--EeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence 355 678899999999999974 2345899999976443 346778888888888 899999999999999
Q ss_pred CeeEEEEeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 759 HQAYLLYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
+..++|||||++|+|.++|+. .+++.++..++.|+|.||+|||+. +||||||||+|||+
T Consensus 92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiLl 168 (299)
T d1fgka_ 92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 168 (299)
T ss_dssp SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeecccceee
Confidence 999999999999999999964 258899999999999999999999 99999999999999
Q ss_pred CCCCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc
Q 002186 821 DENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 896 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~ 896 (955)
+.++.+||+|||+++........ ...+...|.+||......++.++||||||||+|||+|++.|++.+....
T Consensus 169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~---- 244 (299)
T d1fgka_ 169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---- 244 (299)
T ss_dssp CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----
T ss_pred cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH----
Confidence 99999999999999865443221 1224555788898888899999999999999999999544443332211
Q ss_pred cccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 897 DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.....+.+......+. ....++.+++.+||+.||++||||+||++.|+++
T Consensus 245 -~~~~~i~~~~~~~~p~---~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i 294 (299)
T d1fgka_ 245 -ELFKLLKEGHRMDKPS---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294 (299)
T ss_dssp -HHHHHHHTTCCCCCCS---SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -HHHHHHHcCCCCCCCc---cchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 1111111111111111 1234577899999999999999999999999876
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-42 Score=380.71 Aligned_cols=250 Identities=14% Similarity=0.179 Sum_probs=192.8
Q ss_pred hHhhhcccchh-hhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEc----C
Q 002186 686 DVLRSFNSTEC-EEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYN----R 758 (955)
Q Consensus 686 ~~~~~~~~~~~-~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~----~ 758 (955)
.+.+.|. .. +.||+|+||+||+|+ ..+|+.||||+++.. +.+.+|++++.++ +|||||++++++++ +
T Consensus 8 ~i~~~y~--i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~ 81 (335)
T d2ozaa1 8 AIIDDYK--VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGR 81 (335)
T ss_dssp CGGGTEE--EEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred CcccCEE--EeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCC
Confidence 3445565 54 459999999999998 468999999999742 4566788887654 89999999999875 4
Q ss_pred CeeEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---CCCceECcc
Q 002186 759 HQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEF 831 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~Df 831 (955)
+..|+|||||++|+|.+++.. .+++.+...|+.|++.||+|||+. +|+||||||+|||++. ++.+||+||
T Consensus 82 ~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DF 158 (335)
T d2ozaa1 82 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 158 (335)
T ss_dssp EEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCC
T ss_pred CEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCcccccccccccccccccccccccccc
Confidence 578999999999999999975 357888999999999999999999 9999999999999985 467999999
Q ss_pred cccccccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 832 GFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 832 Gl~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
|+++....... ....++++|++||+..+..++.++||||+||++|||+||+.||.+....... ......+.......
T Consensus 159 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~--~~~~~~i~~~~~~~ 236 (335)
T d2ozaa1 159 GFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--PGMKTRIRMGQYEF 236 (335)
T ss_dssp TTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC----------CCCSCSSSC
T ss_pred ceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHH--HHHHHHHhcCCCCC
Confidence 99986544332 2334677889999999889999999999999999999999999743321110 00111111111011
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..+.......++.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 237 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp CTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 112223445678899999999999999999999873
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.4e-42 Score=380.80 Aligned_cols=244 Identities=11% Similarity=0.066 Sum_probs=191.8
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHH---HHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIV---SEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~---~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||++..... ....+ .+|+++++.++|||||++++++.+++..
T Consensus 5 dy~--i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 5 DFS--VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp TEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hCe--eeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence 355 778999999999999994 5899999999964321 12223 3446778888999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
|+|||||++|+|.+++.+ ..++.+...++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+....
T Consensus 83 ~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred EEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence 999999999999999975 457788889999999999999999 999999999999999999999999999987655
Q ss_pred cCCCCcccccccCchhhhh-ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 840 ADGSFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 840 ~~~~~~~~~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
.......+++.|++||++. +..++.++||||+||++|||+||+.||......... .......... ...+. ..
T Consensus 160 ~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~---~~~~~~~~~~-~~~~~---~~ 232 (364)
T d1omwa3 160 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---EIDRMTLTMA-VELPD---SF 232 (364)
T ss_dssp SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHH---HHHHHSSSCC-CCCCS---SS
T ss_pred CcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHhcccCC-CCCCC---CC
Confidence 4444445677788999885 456899999999999999999999999753321110 0111111111 11111 12
Q ss_pred HHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPS-----MEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt-----~~ev~~ 945 (955)
..++.+++.+||+.||++||| ++|+++
T Consensus 233 s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 233 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred CHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 345778999999999999999 688875
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.9e-42 Score=375.52 Aligned_cols=241 Identities=17% Similarity=0.163 Sum_probs=196.2
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 5 dy~--i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 5 DFQ--ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred HeE--EEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeE
Confidence 355 788999999999999995 689999999997532 2356788999999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
||||++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 83 mE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 159 (316)
T d1fota_ 83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 159 (316)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred eeecCCccccccccccccccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEeccccc
Confidence 999999999998875 457777788999999999999999 999999999999999999999999999987654332
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...+++.|++||+..+..++.++||||+||++|||+||+.||.+.... .....+.... ...++ ....++
T Consensus 160 -~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~s~~~ 228 (316)
T d1fota_ 160 -TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM------KTYEKILNAE-LRFPP---FFNEDV 228 (316)
T ss_dssp -CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHCC-CCCCT---TSCHHH
T ss_pred -cccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHH------HHHHHHHcCC-CCCCC---CCCHHH
Confidence 233566789999999888999999999999999999999999743211 1111111111 11111 122456
Q ss_pred HHHHHHccCCCCCCCC-----CHHHHHHH
Q 002186 923 LDVALLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
.+++.+|++.||++|| |++|++++
T Consensus 229 ~~li~~~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 229 KDLLSRLITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp HHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence 7888999999999996 89998763
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-41 Score=365.16 Aligned_cols=257 Identities=18% Similarity=0.230 Sum_probs=192.0
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
+|. ..+.||+|+||+||+|+ ..+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 3 ~Y~--~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~ 80 (298)
T d1gz8a_ 3 NFQ--KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 80 (298)
T ss_dssp TEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCE--eccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEE
Confidence 455 78899999999999999 46899999999965332 2567889999999999999999999999999999999
Q ss_pred eecCCCChhHHhh-c---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 766 DYLPNGNLSEKIR-T---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 766 ey~~~gsL~~~l~-~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||+.++ +.+.+. . .+++.+...++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++......
T Consensus 81 e~~~~~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~ 156 (298)
T d1gz8a_ 81 EFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156 (298)
T ss_dssp ECCSEE-HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred eecCCc-hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccCCc
Confidence 999765 444442 2 468999999999999999999999 99999999999999999999999999997654322
Q ss_pred CC--CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Ccccccccccc
Q 002186 842 GS--FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLLGEM 903 (955)
Q Consensus 842 ~~--~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~~~~ 903 (955)
.. ...+++.|.+||..... .++.++||||+||++|||+||+.||.+..... .+.........
T Consensus 157 ~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (298)
T d1gz8a_ 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236 (298)
T ss_dssp BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccc
Confidence 21 22355667888876554 45789999999999999999999986432110 00000000000
Q ss_pred ccccccCCCCchH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhccCC
Q 002186 904 YNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLKP 952 (955)
Q Consensus 904 ~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~~~ 952 (955)
....+........ ....++.+++.+||+.||++|||++|++++ ++++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~ 291 (298)
T d1gz8a_ 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291 (298)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred ccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence 0000000011111 123567889999999999999999999986 666543
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-42 Score=372.90 Aligned_cols=249 Identities=22% Similarity=0.205 Sum_probs=187.4
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccch------HHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR------IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~------~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..++||+|+||+||+|+. .+|+.||||+++..... .+.+.+|++++++++|||||++++++.+++..|+||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 456899999999999995 57999999999753221 24578999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 768 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 768 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
|++|++...... .+++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~ 158 (299)
T d1ua2a_ 82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT 158 (299)
T ss_dssp CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred hcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence 999888777654 457778889999999999999999 9999999999999999999999999999765433222
Q ss_pred CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Ccccccccccccccc
Q 002186 844 FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLLGEMYNEN 907 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~~~~~~~~ 907 (955)
...++++|++||+... ..++.++||||+||++|||+||+.||....... .+.............
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ua2a_ 159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238 (299)
T ss_dssp CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence 2235677889998754 457999999999999999999998886432110 000000000000000
Q ss_pred ccCCCCc---hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 908 EVGSSSS---LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 908 ~~~~~~~---~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.....+. .......+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 0000000 01123568899999999999999999999874
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=1e-41 Score=372.33 Aligned_cols=292 Identities=28% Similarity=0.465 Sum_probs=183.2
Q ss_pred CChhhHHHHHHhhhhCCCCCCCCCCCCCCCCCCCCCCCCCc--cccceeecCCC--CcEEEEEcCCCCCCc--cCCCCcc
Q 002186 23 ANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYAC--SWSGVKCNKNN--TIVVGINLSMKGLSG--ALPGKPL 96 (955)
Q Consensus 23 ~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~c--~w~gv~C~~~~--~~v~~l~l~~~~l~g--~~~~~~~ 96 (955)
|.++||+||++||+++.+| ..+++|..+ +||| .|.||+|+..+ +||+.++|+++++.| .+|+.+.
T Consensus 3 c~~~e~~aLl~~k~~~~~~-~~l~sW~~~--------~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~ 73 (313)
T d1ogqa_ 3 CNPQDKQALLQIKKDLGNP-TTLSSWLPT--------TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA 73 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCC-GGGTTCCTT--------SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGG
T ss_pred CCHHHHHHHHHHHHHCCCC-CcCCCCCCC--------CCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHh
Confidence 6789999999999999887 479999754 5788 59999998744 378888887777776 3556665
Q ss_pred hhcCCCCcEEECCC-CcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcc
Q 002186 97 RIFFNELVDLNLSH-NSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHL 175 (955)
Q Consensus 97 ~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L 175 (955)
. +++|++|||++ |+++|.+|.+|++|++|++|+|++|++.+..|..+..+..|+++++++|.+.+.+|..++++++|
T Consensus 74 ~--L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L 151 (313)
T d1ogqa_ 74 N--LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151 (313)
T ss_dssp G--CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTC
T ss_pred c--CccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCccc
Confidence 5 66666666664 66666666666666666666666666666666666666666666666666666666666666666
Q ss_pred eEEEecCCCCcccCCCCcCCCCCC-cEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccC
Q 002186 176 KVLNLAGSYFSGPIPSQFGSFKSL-EFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAG 254 (955)
Q Consensus 176 ~~L~Ls~n~l~~~~p~~~~~l~~L-~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~ 254 (955)
+++++++|.+++.+|..++.+..+ +.+++++|++++..|..+..+..+ .++++.+...|.+|..++.+++++.+++++
T Consensus 152 ~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~ 230 (313)
T d1ogqa_ 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNTQKIHLAK 230 (313)
T ss_dssp CEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCCSEEECCS
T ss_pred ceeeccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence 666666666666666666666554 566666666666555555554433 355555555555555555555555555555
Q ss_pred CCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEeccccc
Q 002186 255 ANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNE 328 (955)
Q Consensus 255 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 328 (955)
|.+.+.+| .+..+++|+.|+|++|+++|.+|..|.++++|++|+|++|+|+|.+|. ++.+++|+.+++++|+
T Consensus 231 ~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 231 NSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNK 302 (313)
T ss_dssp SEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSS
T ss_pred cccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCc
Confidence 55554332 344445555555555555555554455555555555555555444442 3444444444444443
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1e-41 Score=374.80 Aligned_cols=241 Identities=13% Similarity=0.102 Sum_probs=197.6
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
++|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.+.+..++
T Consensus 41 d~y~--i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 118 (350)
T d1rdqe_ 41 DQFD--RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp GGEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCeE--EEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccc
Confidence 3466 888999999999999985 689999999997532 235668899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+.+|+|.+++.+ .+++.....|+.|++.||+|||+. +||||||||+|||++.++.+||+|||+++......
T Consensus 119 v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~ 195 (350)
T d1rdqe_ 119 VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred ccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeeccccc
Confidence 9999999999999965 578888899999999999999999 99999999999999999999999999998765432
Q ss_pred CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 842 GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
. ...+++.|++||++.+..++.++||||+||++|||+||+.||.+.... .....+.... ...+. ....+
T Consensus 196 ~-~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~s~~ 264 (350)
T d1rdqe_ 196 W-TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI------QIYEKIVSGK-VRFPS---HFSSD 264 (350)
T ss_dssp C-CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TCCHH
T ss_pred c-cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHH------HHHHHHhcCC-CCCCc---cCCHH
Confidence 2 234667799999999989999999999999999999999999743211 1111111111 11111 12345
Q ss_pred HHHHHHHccCCCCCCCC-----CHHHHHH
Q 002186 922 VLDVALLCTRSTPSDRP-----SMEEALK 945 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RP-----t~~ev~~ 945 (955)
+.+++.+||+.||++|+ |++|+++
T Consensus 265 ~~~li~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 265 LKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHhhhCHHhccccccccHHHHHc
Confidence 77889999999999994 8999986
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-42 Score=372.82 Aligned_cols=237 Identities=18% Similarity=0.170 Sum_probs=189.4
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHh-ccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIG-TVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~-~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.||+|+||+||+|+. .+|+.||||+++... ...+.+..|+.++. .++|||||++++++.+++..|+|||||
T Consensus 6 i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~ 85 (320)
T d1xjda_ 6 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYL 85 (320)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeec
Confidence 778999999999999995 589999999997532 22344556666654 689999999999999999999999999
Q ss_pred CCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--C
Q 002186 769 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--F 844 (955)
Q Consensus 769 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~ 844 (955)
++|+|.++++. ..+..+...++.||+.||+|||+. +|+||||||+|||++.++.+|++|||+++........ .
T Consensus 86 ~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~ 162 (320)
T d1xjda_ 86 NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT 162 (320)
T ss_dssp TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCC
T ss_pred CCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhcccccccccc
Confidence 99999999975 567788899999999999999999 9999999999999999999999999999754432221 2
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..+++.|.+||+..+..++.++||||+||++|||+||+.||.+..... ....+.... ...+. ....++.+
T Consensus 163 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~------~~~~i~~~~-~~~p~---~~s~~~~d 232 (320)
T d1xjda_ 163 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE------LFHSIRMDN-PFYPR---WLEKEAKD 232 (320)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCT---TSCHHHHH
T ss_pred cCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHH------HHHHHHcCC-CCCCc---cCCHHHHH
Confidence 235677889999999999999999999999999999999997432111 111111111 11111 12345778
Q ss_pred HHHHccCCCCCCCCCHH-HHH
Q 002186 925 VALLCTRSTPSDRPSME-EAL 944 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~-ev~ 944 (955)
++.+||+.||++|||+. |++
T Consensus 233 li~~~L~~dP~~R~s~~~~l~ 253 (320)
T d1xjda_ 233 LLVKLFVREPEKRLGVRGDIR 253 (320)
T ss_dssp HHHHHSCSSGGGSBTTBSCGG
T ss_pred HHHHhcccCCCCCcCHHHHHH
Confidence 99999999999999995 675
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=5.4e-41 Score=360.93 Aligned_cols=251 Identities=18% Similarity=0.214 Sum_probs=189.2
Q ss_pred hcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
+|. ..+.||+|+||+||+|+..+|+.||||+++.... ..+.+.+|+.+|++++|||||++++++.+++..++|||
T Consensus 3 ~Y~--~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e 80 (286)
T d1ob3a_ 3 KYH--GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (286)
T ss_dssp SEE--EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred Cce--eccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEE
Confidence 455 7889999999999999999999999999965322 25678899999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 767 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 767 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
|+.++.+..+... .++..+...++.|+++||+|||+. +||||||||+|||++.++.+|++|||.+.........
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 157 (286)
T d1ob3a_ 81 HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (286)
T ss_dssp CCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred eehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceecccCcccc
Confidence 9988777776654 568888999999999999999998 9999999999999999999999999998765432221
Q ss_pred -CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCC---------------CCcccccccccc---
Q 002186 844 -FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSL---------------QNKPIDGLLGEM--- 903 (955)
Q Consensus 844 -~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~---------------~~~~~~~~~~~~--- 903 (955)
...+.+.|.+||.... ..++.++||||+||++|||+||+.||.+.... ..|.........
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T d1ob3a_ 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237 (286)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred ceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccc
Confidence 1124445667776654 56789999999999999999999998643210 001000000000
Q ss_pred cccc-ccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 904 YNEN-EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 904 ~~~~-~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.... ..............+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000 00000001112346778999999999999999999975
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.6e-42 Score=363.55 Aligned_cols=233 Identities=16% Similarity=0.139 Sum_probs=186.9
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc-------hHHHHHHHHHHHhccC--CCCceeEeEEEEcCCeeEEE
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVR--HKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~-------~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lv 764 (955)
..+.||+|+||+||+|+ ..+|+.||||+++.... ....+.+|++++++++ |||||++++++.+++..++|
T Consensus 8 i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv 87 (273)
T d1xwsa_ 8 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 87 (273)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEE
T ss_pred EeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEE
Confidence 77899999999999999 46899999999975321 1233568999999887 89999999999999999999
Q ss_pred EeecCC-CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC-CCceECccccccccccc
Q 002186 765 YDYLPN-GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 765 ~ey~~~-gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~-~~~ki~DfGl~~~~~~~ 840 (955)
|||+.+ +++.+++.. ..++.+...++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++.....
T Consensus 88 ~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~ 164 (273)
T d1xwsa_ 88 LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164 (273)
T ss_dssp EECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCSS
T ss_pred EEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECccccceecccc
Confidence 999976 688888764 578888999999999999999998 99999999999999854 78999999999765443
Q ss_pred CCCCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 841 DGSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 841 ~~~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
......+++.|++||+.....+ +.++||||+||++|||+||+.||...... .... ...... ..
T Consensus 165 ~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i------------~~~~-~~~~~~---~s 228 (273)
T d1xwsa_ 165 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------------IRGQ-VFFRQR---VS 228 (273)
T ss_dssp CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------HHCC-CCCSSC---CC
T ss_pred cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHH------------hhcc-cCCCCC---CC
Confidence 3333346677899998876654 56789999999999999999998642210 0000 000111 12
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.++.+++.+||+.||++|||++|++++
T Consensus 229 ~~~~~li~~~L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 229 SECQHLIRWCLALRPSDRPTFEEIQNH 255 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 457788999999999999999999874
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-40 Score=356.00 Aligned_cols=259 Identities=19% Similarity=0.245 Sum_probs=188.8
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CC-CcEEEEEEeecccc---hHHHHHHHHHHHhc---cCCCCceeEeEEEEc---
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PT-GITVSVKKIEWGAT---RIKIVSEFITRIGT---VRHKNLIRLLGFCYN--- 757 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~-g~~vAvK~~~~~~~---~~~~~~~e~~~l~~---l~H~niv~l~g~~~~--- 757 (955)
++|. ..+.||+|+||+||+|+. .+ ++.||||+++.... ....+.+|+++++. .+|||||+++++|..
T Consensus 7 ~~Y~--i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 7 QQYE--CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GTEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CCEE--EEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 3465 788999999999999985 44 67899999965322 12345566666655 489999999999863
Q ss_pred --CCeeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccc
Q 002186 758 --RHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 832 (955)
Q Consensus 758 --~~~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfG 832 (955)
....++|||||++|++...... ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~dfg 161 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 161 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecchh
Confidence 3468999999998877554433 467888889999999999999999 99999999999999999999999999
Q ss_pred ccccccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Cccc
Q 002186 833 FKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPI 896 (955)
Q Consensus 833 l~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~~ 896 (955)
+++....... ....+++.|.+||+.....++.++||||+||++|||+||+.||....... .|..
T Consensus 162 ~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 241 (305)
T d1blxa_ 162 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 241 (305)
T ss_dssp SCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred hhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccc
Confidence 9876433222 22336677899999999999999999999999999999999997432110 0000
Q ss_pred ccccc-cccccc-ccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhccCC
Q 002186 897 DGLLG-EMYNEN-EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLKP 952 (955)
Q Consensus 897 ~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~~~ 952 (955)
..... ...... ..............+.+++.+||+.||++|||++|++++ ++++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~ 301 (305)
T d1blxa_ 242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 301 (305)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred cccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchh
Confidence 00000 000000 000000011223457788999999999999999999875 666643
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-39 Score=350.50 Aligned_cols=257 Identities=19% Similarity=0.203 Sum_probs=196.4
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
+|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||+++++|.+++..++||
T Consensus 3 ry~--~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~ 80 (292)
T d1unla_ 3 KYE--KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp SEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCE--eeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEe
Confidence 455 788999999999999994 689999999996532 23567889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
||+.++++..+++. ..++.....++.|+++||+|||+. +|+||||||+|||++.++.+|++|||.++.......
T Consensus 81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~ 157 (292)
T d1unla_ 81 EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp ECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSC
T ss_pred eeccccccccccccccccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccCCCcc
Confidence 99999999887765 457788889999999999999999 999999999999999999999999999976543322
Q ss_pred -CCcccccccCchhhhhccC-CcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc----------------cccccccc
Q 002186 843 -SFPAKIAWTESGEFYNAMK-EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI----------------DGLLGEMY 904 (955)
Q Consensus 843 -~~~~~~~~~~~~e~~~~~~-~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~----------------~~~~~~~~ 904 (955)
....+..++++||...... ++.++||||+||++|||+||+.||..+.+...... .....+..
T Consensus 158 ~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T d1unla_ 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred ceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccc
Confidence 1223456677888776554 68999999999999999999999865433211100 00000000
Q ss_pred cc----cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhccC
Q 002186 905 NE----NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLK 951 (955)
Q Consensus 905 ~~----~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~~ 951 (955)
.. ...............+.+++.+|++.||++|||++|++++ +++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~ 290 (292)
T d1unla_ 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred ccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence 00 0000001112233567788999999999999999999864 44443
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-39 Score=356.26 Aligned_cols=256 Identities=21% Similarity=0.261 Sum_probs=187.5
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 759 (955)
+.|. ..+.||+|+||+||+|. ..+|+.||||+++... ...+.+.+|+++|++++|||||+++++|...+
T Consensus 18 ~~Y~--~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~ 95 (346)
T d1cm8a_ 18 AVYR--DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 95 (346)
T ss_dssp SSEE--EEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred CcEE--EEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence 4566 88899999999999999 4689999999997532 23556889999999999999999999998654
Q ss_pred -eeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 760 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 760 -~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
..|+||||| +++|..+.+. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+|++|||+++..
T Consensus 96 ~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~ 171 (346)
T d1cm8a_ 96 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA 171 (346)
T ss_dssp CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccceecc
Confidence 579999999 5678877754 678999999999999999999999 9999999999999999999999999999865
Q ss_pred cccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cc----------------
Q 002186 838 QLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL---------------- 899 (955)
Q Consensus 838 ~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~---------------- 899 (955)
...... ..++++|.+||...+ ..++.++||||+||++|||+||+.||............ ..
T Consensus 172 ~~~~~~-~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (346)
T d1cm8a_ 172 DSEMTG-YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 250 (346)
T ss_dssp CSSCCS-SCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred CCcccc-ccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchh
Confidence 443322 235566788887765 45688999999999999999999998754321100000 00
Q ss_pred ---cccccccc-ccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhccC
Q 002186 900 ---LGEMYNEN-EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLK 951 (955)
Q Consensus 900 ---~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~~ 951 (955)
......+. ..............+.+++.+||..||++|||++|++++ ++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 251 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 00000000 000000011223456789999999999999999999985 55543
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-39 Score=354.46 Aligned_cols=252 Identities=18% Similarity=0.219 Sum_probs=185.8
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCC----eeE
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAY 762 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~ 762 (955)
+|. ..+.||+|+||+||+|+ ..+|+.||||+++... ...+.+.+|+++|++++|||||++++++..+. ..+
T Consensus 9 rY~--~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~ 86 (345)
T d1pmea_ 9 RYT--NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 86 (345)
T ss_dssp TEE--EEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred CeE--EEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence 455 88999999999999998 5799999999997533 23567889999999999999999999997653 234
Q ss_pred EEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 763 LLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
.++||+.+|+|.+++.. .+++.....++.|+++||+|||+. +||||||||+|||++.++.+||+|||+++......
T Consensus 87 ~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~ 163 (345)
T d1pmea_ 87 YLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 163 (345)
T ss_dssp EEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceeeccCCC
Confidence 55567779999999964 678999999999999999999999 99999999999999999999999999987543322
Q ss_pred C-----CCcccccccCchhhh-hccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cc---------------
Q 002186 842 G-----SFPAKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL--------------- 899 (955)
Q Consensus 842 ~-----~~~~~~~~~~~~e~~-~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~--------------- 899 (955)
. ....+++.|.+||.. ....++.++||||+||++|||+||+.||............ ..
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T d1pmea_ 164 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 243 (345)
T ss_dssp CBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred ccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhh
Confidence 1 122355667888876 4456788999999999999999999998743211000000 00
Q ss_pred -ccccccccccCCCCchH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 900 -LGEMYNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 900 -~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
........+........ ....++.+++.+|++.||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 244 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000000000000111 112457899999999999999999999975
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-39 Score=353.10 Aligned_cols=252 Identities=18% Similarity=0.176 Sum_probs=181.3
Q ss_pred cchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcC------CeeEEEE
Q 002186 693 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------HQAYLLY 765 (955)
Q Consensus 693 ~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------~~~~lv~ 765 (955)
|...++||+|+||+||+|+. .+|+.||||+++.... ...+|+++|++++|||||+++++|... ...+|||
T Consensus 22 Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 98 (350)
T d1q5ka_ 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98 (350)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEE
T ss_pred cEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch---HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEE
Confidence 34788999999999999995 5899999999975432 234689999999999999999998643 3578999
Q ss_pred eecCCCChhHHhh---c--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-CceECcccccccccc
Q 002186 766 DYLPNGNLSEKIR---T--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQL 839 (955)
Q Consensus 766 ey~~~gsL~~~l~---~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~-~~ki~DfGl~~~~~~ 839 (955)
|||++|.+....+ . .+++.+...++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||+++....
T Consensus 99 Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~ 175 (350)
T d1q5ka_ 99 DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175 (350)
T ss_dssp ECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred eccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchhhccC
Confidence 9998764433322 2 468889999999999999999998 999999999999999775 899999999876543
Q ss_pred cCCC-CcccccccCchhhh-hccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc-------------cccc---cc
Q 002186 840 ADGS-FPAKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-------------IDGL---LG 901 (955)
Q Consensus 840 ~~~~-~~~~~~~~~~~e~~-~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~-------------~~~~---~~ 901 (955)
.... ...++..+.+||.. ....++.++||||+||++|||+||+.||.......... .... ..
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~ 255 (350)
T d1q5ka_ 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255 (350)
T ss_dssp TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence 3222 22234445566654 45678999999999999999999999987432110000 0000 00
Q ss_pred ccccccccCC---CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhcc
Q 002186 902 EMYNENEVGS---SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGL 950 (955)
Q Consensus 902 ~~~~~~~~~~---~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~ 950 (955)
...-+..... .........++.+++.+||+.||++|||++|++++ ++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 309 (350)
T d1q5ka_ 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309 (350)
T ss_dssp CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence 0000000000 00001223457788999999999999999999964 4544
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.6e-39 Score=348.99 Aligned_cols=253 Identities=20% Similarity=0.268 Sum_probs=185.7
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc------
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN------ 757 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------ 757 (955)
..+|. ..+.||+|+||+||+|+. .+|+.||||++.... ...+.+.+|+++|++++||||+++++++..
T Consensus 9 ~~rY~--i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~ 86 (318)
T d3blha1 9 VSKYE--KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 86 (318)
T ss_dssp GGGEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred cCCEE--EEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccc
Confidence 45676 889999999999999994 689999999986532 234567899999999999999999999865
Q ss_pred --CCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccc
Q 002186 758 --RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833 (955)
Q Consensus 758 --~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl 833 (955)
++..++|||||+++.+...... .........++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~ 163 (318)
T d3blha1 87 RCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 163 (318)
T ss_dssp ----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred ccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecce
Confidence 3468999999998777655543 456777889999999999999999 999999999999999999999999999
Q ss_pred cccccccC------CCCcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cc------
Q 002186 834 KYLTQLAD------GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL------ 899 (955)
Q Consensus 834 ~~~~~~~~------~~~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~------ 899 (955)
++...... .....++.+|.+||..... .++.++||||+||++|||+||+.||.+.......... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 243 (318)
T d3blha1 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243 (318)
T ss_dssp CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 87543221 1112356778889887654 6889999999999999999999998642211000000 00
Q ss_pred ----------ccccccccccCCCCchHH------HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 900 ----------LGEMYNENEVGSSSSLQD------EIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 900 ----------~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
........ ........+ ....+++++.+||+.||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 244 EVWPNVDNYELYEKLELV-KGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp TTSTTCCCC-------CC-SSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhccccchhhhhhhhccc-ccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 00000000 000111111 12356789999999999999999999874
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-39 Score=350.08 Aligned_cols=246 Identities=15% Similarity=0.114 Sum_probs=187.2
Q ss_pred hhcccchhhhccCCCCCceEEEeC----CCCcEEEEEEeeccc-----chHHHHHHHHHHHhccCC-CCceeEeEEEEcC
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRH-KNLIRLLGFCYNR 758 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~-----~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~ 758 (955)
++|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++| ||||++++++.++
T Consensus 24 ~~y~--~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~ 101 (322)
T d1vzoa_ 24 ENFE--LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 101 (322)
T ss_dssp GGEE--EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred hceE--EEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC
Confidence 3466 888999999999999973 368999999986432 234567889999999977 8999999999999
Q ss_pred CeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 759 HQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
+..++|||||.+|+|.+++.. .........++.|++.|++|+|+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 102 ~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a~~ 178 (322)
T d1vzoa_ 102 TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 178 (322)
T ss_dssp TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred CceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccchhh
Confidence 999999999999999999975 445667778999999999999999 999999999999999999999999999876
Q ss_pred ccccCCC---CcccccccCchhhhhcc--CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCC
Q 002186 837 TQLADGS---FPAKIAWTESGEFYNAM--KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 911 (955)
Q Consensus 837 ~~~~~~~---~~~~~~~~~~~e~~~~~--~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (955)
....... ...+.+.+.+||..... .++.++||||+||++|||+||+.||....... .............
T Consensus 179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~--~~~~i~~~~~~~~---- 252 (322)
T d1vzoa_ 179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSE---- 252 (322)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHHHHCC----
T ss_pred hcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhcccCC----
Confidence 4332211 12234445666666443 46789999999999999999999997543221 1111111111111
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRP-----SMEEALK 945 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RP-----t~~ev~~ 945 (955)
.+.......++.+++.+||+.||++|| |++|+++
T Consensus 253 ~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 253 PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred CCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 111122345677889999999999999 5889876
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-38 Score=347.16 Aligned_cols=252 Identities=19% Similarity=0.219 Sum_probs=186.8
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc------C
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN------R 758 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------~ 758 (955)
++|. ..++||+|+||+||+|.. .+|+.||||+++... ...+.+.+|+.++++++|||||++++++.. .
T Consensus 17 ~~Y~--i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~ 94 (355)
T d2b1pa1 17 KRYQ--NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 94 (355)
T ss_dssp TTEE--EEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred CCeE--EEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccC
Confidence 4566 889999999999999994 589999999997542 234568899999999999999999999964 3
Q ss_pred CeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 759 HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
+..|+|||||.+ ++.+.+....++.+...++.|++.||+|||+. +|+||||||+|||++.++.+|++|||+++...
T Consensus 95 ~~~~iv~Ey~~~-~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~ 170 (355)
T d2b1pa1 95 QDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_dssp CEEEEEEECCSE-EHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred ceeEEEEeccch-HHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhccc
Confidence 678999999965 56667777889999999999999999999999 99999999999999999999999999987654
Q ss_pred ccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc---------------cc-ccccc
Q 002186 839 LADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---------------PI-DGLLG 901 (955)
Q Consensus 839 ~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~---------------~~-~~~~~ 901 (955)
..... ...++..|.+||+..+..++.++||||+||++|||++|+.||.+....... .. .....
T Consensus 171 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 250 (355)
T d2b1pa1 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_dssp ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHH
Confidence 33222 122556788999998889999999999999999999999998643211000 00 00000
Q ss_pred c---------------cccccccC-CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 902 E---------------MYNENEVG-SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 902 ~---------------~~~~~~~~-~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
. ........ ...........+.+++.+|++.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0 00000000 011123345678899999999999999999999864
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=6.3e-38 Score=343.87 Aligned_cols=249 Identities=14% Similarity=0.164 Sum_probs=188.6
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccC-CCCceeEeEEEEc--CCeeEEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYN--RHQAYLLY 765 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~--~~~~~lv~ 765 (955)
+|. ..+.||+|+||+||+|+. .+|+.||||+++.. ..+.+.+|+++|++++ |||||++++++.. ....++||
T Consensus 36 ~y~--i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~ 111 (328)
T d3bqca1 36 DYQ--LVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 111 (328)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSS--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred CeE--EEEEEecCcCeEEEEEEECCCCCEEEEEEECHH--HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence 465 788999999999999995 68999999999743 3456788999999996 9999999999984 35689999
Q ss_pred eecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-CceECcccccccccccCC-C
Q 002186 766 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADG-S 843 (955)
Q Consensus 766 ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~-~~ki~DfGl~~~~~~~~~-~ 843 (955)
|||++|+|.+.. +.++..+...++.||++||+|||+. +|+||||||+|||++.++ .+|++|||+++....... .
T Consensus 112 e~~~~~~L~~~~-~~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~ 187 (328)
T d3bqca1 112 EHVNNTDFKQLY-QTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 187 (328)
T ss_dssp ECCCSCBGGGTT-TSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCC
T ss_pred eecCCCcHHHHh-cCCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccceeccCCCccc
Confidence 999999998764 4578888899999999999999999 999999999999998655 589999999976544322 2
Q ss_pred CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc----------------------ccc
Q 002186 844 FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------------------GLL 900 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~----------------------~~~ 900 (955)
...++..+.+||..... .++.++||||+||++|||++|+.||............ ...
T Consensus 188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 267 (328)
T d3bqca1 188 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 267 (328)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGG
T ss_pred ccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCccc
Confidence 22345567788876654 5789999999999999999999998754321100000 000
Q ss_pred ccccccc------ccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 901 GEMYNEN------EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 901 ~~~~~~~------~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....... .............++.+++.+|++.||++|||++|++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H 319 (328)
T d3bqca1 268 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319 (328)
T ss_dssp GGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000000 000011112233567899999999999999999999863
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.6e-38 Score=341.06 Aligned_cols=252 Identities=10% Similarity=0.024 Sum_probs=186.1
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeE-EEEcCCeeEEEEee
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLG-FCYNRHQAYLLYDY 767 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g-~~~~~~~~~lv~ey 767 (955)
+|. ..+.||+|+||+||+|+ ..+|+.||||.+..... .+.+..|++++++++|+|+|..++ +..+.+..++||||
T Consensus 8 rY~--l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~ 84 (299)
T d1ckia_ 8 RYR--LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 84 (299)
T ss_dssp TEE--EEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred EEE--EeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc-CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence 355 77899999999999998 46899999999875432 335678899999998887665554 55677889999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC---CCCCceECcccccccccccC
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD---ENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~---~~~~~ki~DfGl~~~~~~~~ 841 (955)
+. |++.+.+.. ..++.....++.|+++||+|||+. +||||||||+|||++ .+..+|++|||+|+......
T Consensus 85 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (299)
T d1ckia_ 85 LG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 160 (299)
T ss_dssp CC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTT
T ss_pred cC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcceeccccc
Confidence 94 567666542 578999999999999999999999 999999999999876 45679999999998654322
Q ss_pred C---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCC
Q 002186 842 G---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 842 ~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
. ....+++.|++||...+..++.++|||||||++|||+||+.||......................+. .
T Consensus 161 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~--~ 238 (299)
T d1ckia_ 161 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI--E 238 (299)
T ss_dssp TCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCH--H
T ss_pred cccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCCh--h
Confidence 1 1123567789999999988999999999999999999999999753322111111000000000000 0
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
........++.+++..||+.||++||+++++.+.|+.+
T Consensus 239 ~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~ 276 (299)
T d1ckia_ 239 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276 (299)
T ss_dssp HHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred HhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 00012235577889999999999999999998877653
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=6.6e-38 Score=336.97 Aligned_cols=249 Identities=11% Similarity=0.019 Sum_probs=190.2
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccCC-CCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRH-KNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..+.||+|+||+||+|+ ..+|+.||||.++... ..+.+.+|++++++++| +|++.+++++.+....++||||+ +|+
T Consensus 9 i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~ 86 (293)
T d1csna_ 9 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPS 86 (293)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCC
Confidence 77889999999999999 4589999999986532 23346678888888875 89999999999999999999999 689
Q ss_pred hhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-----CCCceECcccccccccccCC--
Q 002186 773 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-----NMEPHLAEFGFKYLTQLADG-- 842 (955)
Q Consensus 773 L~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-----~~~~ki~DfGl~~~~~~~~~-- 842 (955)
|.++++. ..++.+...++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.......
T Consensus 87 l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~ 163 (293)
T d1csna_ 87 LEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ 163 (293)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCC
T ss_pred HHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccceeEEcccCcccc
Confidence 9998864 468888999999999999999999 9999999999999974 56799999999986543211
Q ss_pred -------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 843 -------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 843 -------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
....+++.|++||...+..++.++|||||||++|||+||+.||..............+.......+. ....
T Consensus 164 ~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~--~~l~ 241 (293)
T d1csna_ 164 HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL--RELC 241 (293)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH--HHHT
T ss_pred ceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCCh--HHhc
Confidence 1123567789999999989999999999999999999999999743322111111111000000000 0000
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
...++++.+++..|+..+|++||+++.+.+.|+++
T Consensus 242 ~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~ 276 (293)
T d1csna_ 242 AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 276 (293)
T ss_dssp TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 11224577888899999999999999888877653
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-38 Score=347.13 Aligned_cols=252 Identities=20% Similarity=0.256 Sum_probs=185.4
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcC-----C
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----H 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~ 759 (955)
++|. ..+.||+|+||+||+|+ ..+|+.||||+++.... ..+.+.+|+++|++++|||||++++++... .
T Consensus 18 ~rY~--i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~ 95 (348)
T d2gfsa1 18 ERYQ--NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95 (348)
T ss_dssp TTEE--EEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred CCeE--EEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence 4566 88899999999999999 56899999999975432 345678999999999999999999998643 3
Q ss_pred eeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
..++||||+.+|+|.++++. .+++.+...++.|++.||+|||+. +|+||||||+|||++.++.+|++|||++....
T Consensus 96 ~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~ 172 (348)
T d2gfsa1 96 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 172 (348)
T ss_dssp CCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----CCT
T ss_pred ceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhcccC
Confidence 44667788889999999965 678888999999999999999999 99999999999999999999999999987654
Q ss_pred ccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cc----------------c
Q 002186 839 LADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL----------------L 900 (955)
Q Consensus 839 ~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~----------------~ 900 (955)
...... .+...+.+||.... ..++.++||||+||++|||+||+.||.+.......... .. .
T Consensus 173 ~~~~~~-~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 251 (348)
T d2gfsa1 173 DEMTGY-VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 251 (348)
T ss_dssp GGGSSS-CHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHH
T ss_pred cccccc-cccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhh
Confidence 433322 34455677776544 45688999999999999999999998743211000000 00 0
Q ss_pred cccccccccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 901 GEMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 901 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
............... ......+.+++.+|++.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 252 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp HHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence 000000000000000 1123457789999999999999999999973
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=4.6e-33 Score=309.86 Aligned_cols=249 Identities=14% Similarity=0.107 Sum_probs=182.1
Q ss_pred chhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccC-----------CCCceeEeEEEEc--CC
Q 002186 694 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----------HKNLIRLLGFCYN--RH 759 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~g~~~~--~~ 759 (955)
...++||+|+||+||+|+. .+|+.||||+++......+.+.+|++++++++ |+|||++++++.. ..
T Consensus 16 ~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~ 95 (362)
T d1q8ya_ 16 ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPN 95 (362)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETT
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeecccc
Confidence 3889999999999999994 68999999999876555667788898888765 5789999998864 45
Q ss_pred eeEEEEeecCCCChhHHhh-----cCCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeeeCCCCC------ce
Q 002186 760 QAYLLYDYLPNGNLSEKIR-----TKRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENME------PH 827 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~-----~~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl~~~~~------~k 827 (955)
..++||+++..+....... ..........++.|+++|++|||+ . +|+||||||+|||++.++. +|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDlKp~NIll~~~~~~~~~~~~k 172 (362)
T d1q8ya_ 96 GVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENLIQIK 172 (362)
T ss_dssp EEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred ceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccCChhHeeeeccCcccccceee
Confidence 6778888876654333221 245777888999999999999998 5 8999999999999986643 89
Q ss_pred ECcccccccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-------ccc
Q 002186 828 LAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-------GLL 900 (955)
Q Consensus 828 i~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-------~~~ 900 (955)
++|||.+....... ....++..|.+||......++.++||||+||+++||+||+.||............ ..+
T Consensus 173 l~dfg~s~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~l 251 (362)
T d1q8ya_ 173 IADLGNACWYDEHY-TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 251 (362)
T ss_dssp ECCCTTCEETTBCC-CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred Eeeccccccccccc-ccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHh
Confidence 99999987554332 2334566688999998888999999999999999999999998743221100000 000
Q ss_pred --------------cccccc----cccC-------------CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 901 --------------GEMYNE----NEVG-------------SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 901 --------------~~~~~~----~~~~-------------~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+. .... ...........+.+++.+|++.||.+|||++|++++
T Consensus 252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 252 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000000 0000 011124456788999999999999999999999875
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.97 E-value=7e-33 Score=301.80 Aligned_cols=272 Identities=27% Similarity=0.358 Sum_probs=190.9
Q ss_pred cccc-ceeecC-CCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcc--cCCccccCCCCCCEEEccC-CcC
Q 002186 63 CSWS-GVKCNK-NNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSG--QFPVEIFNLTSLISLDISR-NNF 137 (955)
Q Consensus 63 c~w~-gv~C~~-~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~--~~p~~~~~l~~L~~L~Ls~-N~l 137 (955)
-+|. |..|+. .+.+|+|-.-. + ..+++.|||++|+++| .+|.++++|++|++|||++ |++
T Consensus 25 ~sW~~~~d~C~~~w~gv~C~~~~-----~----------~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l 89 (313)
T d1ogqa_ 25 SSWLPTTDCCNRTWLGVLCDTDT-----Q----------TYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNL 89 (313)
T ss_dssp TTCCTTSCTTTTCSTTEEECCSS-----S----------CCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTE
T ss_pred CCCCCCCCCCCCcCCCeEEeCCC-----C----------cEEEEEEECCCCCCCCCCCCChHHhcCcccccccccccccc
Confidence 4684 667764 47789982110 0 2368999999999988 5889999999999999986 888
Q ss_pred CccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhc
Q 002186 138 SGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAEL 217 (955)
Q Consensus 138 ~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 217 (955)
+|.+|.+|++|++|++|||++|++.+..|..+.++.+|+++++++|.+.+.+|..|+++++|+++++++|.+++.+|..+
T Consensus 90 ~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~ 169 (313)
T d1ogqa_ 90 VGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSY 169 (313)
T ss_dssp ESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGG
T ss_pred ccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeecccccccccccccc
Confidence 88888888888899999988888888888888888888888888888888888888888888888888888877777777
Q ss_pred cCCCCC-cEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccC
Q 002186 218 GMLKTV-THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK 296 (955)
Q Consensus 218 ~~l~~L-~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 296 (955)
..+..+ +.++++.|.++|..|..+.++..+ .+++..+...+.+|..+..+++|+
T Consensus 170 ~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-------------------------~l~l~~~~~~~~~~~~~~~~~~l~ 224 (313)
T d1ogqa_ 170 GSFSKLFTSMTISRNRLTGKIPPTFANLNLA-------------------------FVDLSRNMLEGDASVLFGSDKNTQ 224 (313)
T ss_dssp GCCCTTCCEEECCSSEEEEECCGGGGGCCCS-------------------------EEECCSSEEEECCGGGCCTTSCCS
T ss_pred ccccccccccccccccccccccccccccccc-------------------------cccccccccccccccccccccccc
Confidence 666554 555555555555555444444322 445555555555555555555555
Q ss_pred EEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCc
Q 002186 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376 (955)
Q Consensus 297 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~ 376 (955)
.+++++|.+.+.+| .++.+++|+.|++++|+++|.+|+.++++++|++|+|++|+++|.+|+ ++++++|+.+++++|+
T Consensus 225 ~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 225 KIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNK 302 (313)
T ss_dssp EEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSS
T ss_pred cccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCc
Confidence 55555555554433 455556666666666666666666666666666666666666666664 4566677777777776
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.95 E-value=1.1e-26 Score=260.21 Aligned_cols=341 Identities=22% Similarity=0.294 Sum_probs=179.1
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+.+|++|+++++.|+. + ..+..|++|++|||++|+|++.. .|+++++|++|++++|.+.+.. .++++++|+.|+
T Consensus 43 l~~l~~L~l~~~~I~~-l-~gl~~L~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~L~ 116 (384)
T d2omza2 43 LDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADIT--PLANLTNLTGLT 116 (384)
T ss_dssp HTTCCEEECCSSCCCC-C-TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCEEE
T ss_pred hCCCCEEECCCCCCCC-c-cccccCCCCCEEeCcCCcCCCCc--cccCCccccccccccccccccc--cccccccccccc
Confidence 3445555555555542 2 23455555555555555555432 2555555555555555555321 255555555555
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
+++|.+++..+ ......+..+....|.+....+................ .....+.............|...
T Consensus 117 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~- 188 (384)
T d2omza2 117 LFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV-----TDLKPLANLTTLERLDISSNKVS- 188 (384)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESC-----CCCGGGTTCTTCCEEECCSSCCC-
T ss_pred ccccccccccc--cccccccccccccccccccccccccccccccccccccc-----chhhhhccccccccccccccccc-
Confidence 55555543322 22334444444444444332222111111111111110 11112233333344444444332
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
....+..+++++.+++++|.+++..| +...++|++|++++|+++.. +.+..+++|+.|++++|.+++..+ +..
T Consensus 189 -~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~ 261 (384)
T d2omza2 189 -DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSG 261 (384)
T ss_dssp -CCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT
T ss_pred -cccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCCc--ccc
Confidence 23445566677777777777665543 34456677777777776642 356666777777777777665432 556
Q ss_pred CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+++|+.|++++|.+++..+ +..+..++.++++.|.+.+. ..+.....++.+++++|++++.. .+..+++|++|+
T Consensus 262 ~~~L~~L~l~~~~l~~~~~--~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~ 335 (384)
T d2omza2 262 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLF 335 (384)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEE
T ss_pred cccCCEeeccCcccCCCCc--cccccccccccccccccccc--cccchhcccCeEECCCCCCCCCc--ccccCCCCCEEE
Confidence 6677777777777664332 45566666777776666531 22444455566666666665542 255566666666
Q ss_pred CcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCC
Q 002186 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNN 471 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N 471 (955)
+++|++++ ++ .+.++++|++|++++|++++..| +.++++|+.|++++|
T Consensus 336 L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 336 FANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 66666653 22 45666666666666666665433 555666666666655
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.95 E-value=4.3e-26 Score=255.26 Aligned_cols=357 Identities=21% Similarity=0.256 Sum_probs=247.8
Q ss_pred EEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC
Q 002186 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (955)
Q Consensus 105 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~ 184 (955)
..+++.+.+++.++ ...+.+|++|++++|.++.. +.++.+++|++|||++|++++. | .++++++|++|++++|.
T Consensus 26 ~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~l-~-~l~~L~~L~~L~L~~n~ 99 (384)
T d2omza2 26 KTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQ 99 (384)
T ss_dssp HHHTTCSSTTSEEC--HHHHTTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSC
T ss_pred HHHhCCCCCCCccC--HHHhCCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCCCC-c-cccCCcccccccccccc
Confidence 34677777777654 35678999999999999853 4688999999999999999964 4 39999999999999999
Q ss_pred CcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCcc
Q 002186 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264 (955)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 264 (955)
+.+.. .++++++|+.|++++|.+++..+ ......+.......|.+....+................ .....
T Consensus 100 i~~i~--~l~~l~~L~~L~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 170 (384)
T d2omza2 100 IADIT--PLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV-----TDLKP 170 (384)
T ss_dssp CCCCG--GGTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESC-----CCCGG
T ss_pred ccccc--ccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccc-----chhhh
Confidence 98653 38999999999999999876543 34456677777776665443332222222222222221 12233
Q ss_pred ccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCcc
Q 002186 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLE 344 (955)
Q Consensus 265 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 344 (955)
+...+.........|... ....+..+++++.+++++|.+++..| +..+++|+.|++++|+++.. +.+..+++|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~ 244 (384)
T d2omza2 171 LANLTTLERLDISSNKVS--DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLT 244 (384)
T ss_dssp GTTCTTCCEEECCSSCCC--CCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCS
T ss_pred hccccccccccccccccc--cccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc--chhhcccccc
Confidence 445555666666666543 23456778899999999999987654 56678999999999998752 4677889999
Q ss_pred EEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCc
Q 002186 345 ILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNS 424 (955)
Q Consensus 345 ~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 424 (955)
.|++++|.+++..+ ++.+++|+.|++++|.+++..+ +.....+..+.+..|.+.+. ..+..+++++.|++++|+
T Consensus 245 ~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~~--~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~ 318 (384)
T d2omza2 245 DLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNN 318 (384)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSC
T ss_pred hhccccCccCCCCc--ccccccCCEeeccCcccCCCCc--cccccccccccccccccccc--cccchhcccCeEECCCCC
Confidence 99999999886543 7778899999999998875322 44555667777777777652 346667777777777777
Q ss_pred cccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcc
Q 002186 425 FSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASA 495 (955)
Q Consensus 425 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~ 495 (955)
+++..+ +..+++|+.|++++|++++ ++ .+..+++|++|++++| .+.+..| +..+++|+.|++++
T Consensus 319 l~~l~~--l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N-~l~~l~~--l~~l~~L~~L~L~~ 382 (384)
T d2omza2 319 ISDISP--VSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHN-QISDLTP--LANLTRITQLGLND 382 (384)
T ss_dssp CSCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSS-CCCBCGG--GTTCTTCSEEECCC
T ss_pred CCCCcc--cccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCC-cCCCChh--hccCCCCCEeeCCC
Confidence 776533 6667777777777777764 33 4666667777777666 4443322 33444444444443
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.93 E-value=6.5e-25 Score=237.33 Aligned_cols=248 Identities=21% Similarity=0.265 Sum_probs=161.9
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
.+-|.|.+|.|+..+ ++ .+|+.+ .+.+++|||++|+|+...+.+|.++++|++|++++|.+..
T Consensus 7 ~c~c~~~~~~C~~~~------------L~-~lP~~l----~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~ 69 (305)
T d1xkua_ 7 RCQCHLRVVQCSDLG------------LE-KVPKDL----PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK 69 (305)
T ss_dssp TCEEETTEEECTTSC------------CC-SCCCSC----CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCEecCCEEEecCCC------------CC-ccCCCC----CCCCCEEECcCCcCCCcChhHhhccccccccccccccccc
Confidence 345889999998622 21 334433 3468889999999887666788889999999999999888
Q ss_pred cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCC--CCCchhc
Q 002186 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN--DQIPAEL 217 (955)
Q Consensus 140 ~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l 217 (955)
..|..|.++++|++|++++|+++. +|..+ ...|+.|+++.|.+.+..+..+.....++.++...|... ...+..+
T Consensus 70 i~~~~f~~l~~L~~L~l~~n~l~~-l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~ 146 (305)
T d1xkua_ 70 ISPGAFAPLVKLERLYLSKNQLKE-LPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF 146 (305)
T ss_dssp BCTTTTTTCTTCCEEECCSSCCSB-CCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGG
T ss_pred cchhhhhCCCccCEecccCCccCc-Cccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCcccc
Confidence 888888888999999998888874 55433 357788888888887766666777777788887777542 2234455
Q ss_pred cCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCE
Q 002186 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKS 297 (955)
Q Consensus 218 ~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 297 (955)
..+++|+.++++.|.+.. +|.. ..++|+.|++++|...+..+..+.+++.+++|++++|.+.+..+..|.++++|++
T Consensus 147 ~~l~~L~~l~l~~n~l~~-l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~ 223 (305)
T d1xkua_ 147 QGMKKLSYIRIADTNITT-IPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRE 223 (305)
T ss_dssp GGCTTCCEEECCSSCCCS-CCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCE
T ss_pred ccccccCccccccCCccc-cCcc--cCCccCEEECCCCcCCCCChhHhhcccccccccccccccccccccccccccccee
Confidence 556666666666665442 2322 2345555566555555555555555555555555555555555555555555555
Q ss_pred EEccCCCCCCCCCcccCCCCCCcEEecccccCCC
Q 002186 298 LDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 331 (955)
Q Consensus 298 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 331 (955)
|+|++|+|+. +|.+|..+++|++|++++|+++.
T Consensus 224 L~L~~N~L~~-lp~~l~~l~~L~~L~Ls~N~i~~ 256 (305)
T d1xkua_ 224 LHLNNNKLVK-VPGGLADHKYIQVVYLHNNNISA 256 (305)
T ss_dssp EECCSSCCSS-CCTTTTTCSSCCEEECCSSCCCC
T ss_pred eecccccccc-cccccccccCCCEEECCCCccCc
Confidence 5555555552 34555555555555555555553
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.92 E-value=1.2e-23 Score=227.09 Aligned_cols=283 Identities=23% Similarity=0.301 Sum_probs=176.6
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
.+.+|=++++++ .+|..+. +++++|||++|+|+...+.+|.++++|++||+++|.+....|..|.++++|++|++++
T Consensus 12 ~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~ 88 (305)
T d1xkua_ 12 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 88 (305)
T ss_dssp TTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccC
Confidence 455677777887 5677664 6899999999999977777899999999999999999988888899999999999999
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEeccccccc--CCCCccccCCCCCcEEeccCCCCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ--GNIPWQLGNMSEVQYLDIAGANLSGS 260 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~--g~~p~~~~~l~~L~~L~Ls~n~l~~~ 260 (955)
|+++. +|..+ ...|+.|+++.|.+.+..+..+.....+..++...|... ...+..+..+++|+++++++|+++.
T Consensus 89 n~l~~-l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~- 164 (305)
T d1xkua_ 89 NQLKE-LPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT- 164 (305)
T ss_dssp SCCSB-CCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-
T ss_pred CccCc-Cccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccc-
Confidence 99984 55543 457889999999988766666766777777776665322 2233344455555555555555442
Q ss_pred CCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCC
Q 002186 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (955)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 340 (955)
+|..+ +++ |+.|++++|..++..+..|..++.++.|++++|.+.+..+..+..+
T Consensus 165 l~~~~--~~~------------------------L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l 218 (305)
T d1xkua_ 165 IPQGL--PPS------------------------LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 218 (305)
T ss_dssp CCSSC--CTT------------------------CSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred cCccc--CCc------------------------cCEEECCCCcCCCCChhHhhcccccccccccccccccccccccccc
Confidence 22221 334 4444555544444444445555555555555555554444455555
Q ss_pred CCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEEC
Q 002186 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRL 420 (955)
Q Consensus 341 ~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~L 420 (955)
++|++|+|++|.++ .+|..+..+++|++|++++|+++ .++...+.. +.......+|+.|+|
T Consensus 219 ~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~-~i~~~~f~~-----------------~~~~~~~~~L~~L~L 279 (305)
T d1xkua_ 219 PHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS-AIGSNDFCP-----------------PGYNTKKASYSGVSL 279 (305)
T ss_dssp TTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC-CCCTTSSSC-----------------SSCCTTSCCCSEEEC
T ss_pred ccceeeeccccccc-ccccccccccCCCEEECCCCccC-ccChhhccC-----------------cchhcccCCCCEEEC
Confidence 55555555555554 34455555555555666555554 333221110 112233556777777
Q ss_pred cCCccc--cccchhccCCC
Q 002186 421 EDNSFS--GEIPLKFSQLP 437 (955)
Q Consensus 421 s~N~l~--~~~p~~~~~l~ 437 (955)
++|.+. ...|..|.-+.
T Consensus 280 ~~N~~~~~~~~~~~f~~~~ 298 (305)
T d1xkua_ 280 FSNPVQYWEIQPSTFRCVY 298 (305)
T ss_dssp CSSSSCGGGSCGGGGTTCC
T ss_pred CCCcCccCcCCHhHhcccc
Confidence 777654 23344444433
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.8e-24 Score=231.11 Aligned_cols=207 Identities=23% Similarity=0.240 Sum_probs=137.1
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCC-CCCCCCCCchhhcCCCcceEEE
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAF-SNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~-~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
..+++|+|++|+|+...+.+|.++++|++||+++|++.+..+..+..+..++.++.. .|.++...|..|.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 356788888888876666677888888888888888877777777777777777654 4455555566677777777777
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
+++|.+....+..+...++|+.+++++|.+++..+.. +..+++|++|++++|++++
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~------------------------f~~~~~L~~L~l~~N~l~~ 167 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDT------------------------FRDLGNLTHLFLHGNRISS 167 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT------------------------TTTCTTCCEEECCSSCCCE
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhH------------------------hccccchhhcccccCcccc
Confidence 7777766555666666666777777766665433333 3344455555555555555
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 331 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 331 (955)
..+..+.++++|+.+++++|++++..|..|..+++|++|++++|++.+..+..|+.+++|++|++++|.+..
T Consensus 168 l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 168 VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred cchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 555556666666666666666666666666666666666666666666666666666666666666666554
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=3e-24 Score=229.32 Aligned_cols=206 Identities=19% Similarity=0.156 Sum_probs=178.0
Q ss_pred EEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEcc-CCcCCccCCccccCCCCCcEEe
Q 002186 77 VVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDIS-RNNFSGHFPGGIQSLRNLLVLD 155 (955)
Q Consensus 77 v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls-~N~l~~~~p~~~~~l~~L~~Ld 155 (955)
+..++|+++.++..-+..+.. ++.|++||+++|.+.+..+..+..++.++.++.+ .|.++...|..|.++++|++|+
T Consensus 34 ~~~L~Ls~N~i~~i~~~~f~~--l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 34 SQRIFLHGNRISHVPAASFRA--CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp CSEEECTTSCCCEECTTTTTT--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCEEECcCCcCCCCCHHHhhc--cccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 567999999997543334555 7899999999999999999999999999999875 5667777788999999999999
Q ss_pred CCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccC
Q 002186 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (955)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g 235 (955)
+++|.+....+..+....+|+.+++++|.+++..+..|..+++|++|++++|.+++..+..+..+++|+.+++++|.+.+
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~ 191 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccc
Confidence 99999988778889999999999999999998778889999999999999999998888888888888888888888888
Q ss_pred CCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccccccc
Q 002186 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQ 284 (955)
Q Consensus 236 ~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 284 (955)
..|..+.++++|++||+++|.+.+..|..+.++++|++|++++|.+...
T Consensus 192 i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~ 240 (284)
T d1ozna_ 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (284)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred cChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCC
Confidence 7788888888888888888888877777788888888888888877643
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=2.1e-21 Score=204.66 Aligned_cols=193 Identities=24% Similarity=0.229 Sum_probs=121.4
Q ss_pred EcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCC
Q 002186 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160 (955)
Q Consensus 81 ~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~ 160 (955)
+.++++++ .+|+.+ .+.+++|||++|.|++..+.+|.++++|++|+|++|+|+.. | .++.+++|++|||++|+
T Consensus 16 ~C~~~~L~-~iP~~l----p~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~Ls~N~ 88 (266)
T d1p9ag_ 16 NCDKRNLT-ALPPDL----PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-Q-VDGTLPVLGTLDLSHNQ 88 (266)
T ss_dssp ECTTSCCS-SCCSCC----CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-E-CCSCCTTCCEEECCSSC
T ss_pred EccCCCCC-eeCcCc----CcCCCEEECcCCcCCCcCHHHhhcccccccccccccccccc-c-ccccccccccccccccc
Confidence 45555555 355443 23577888888888776667777888888888888877643 3 35677777777777777
Q ss_pred CCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCcc
Q 002186 161 FSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQ 240 (955)
Q Consensus 161 l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~ 240 (955)
+++ .+..+.++++|++|++++|.+.+..+..+..+.++++|++++|.++...+..+..+++++.+++++|
T Consensus 89 l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N--------- 158 (266)
T d1p9ag_ 89 LQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN--------- 158 (266)
T ss_dssp CSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS---------
T ss_pred ccc-cccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccc---------
Confidence 764 4556777777777777777777666666777777777777777776555544444555555555544
Q ss_pred ccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCC
Q 002186 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS 306 (955)
Q Consensus 241 ~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 306 (955)
++++..+..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|.+.
T Consensus 159 ---------------~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 159 ---------------NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp ---------------CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ---------------cccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 444444444555555555555555555 34444445555555555555543
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=1.6e-21 Score=205.56 Aligned_cols=198 Identities=21% Similarity=0.209 Sum_probs=150.5
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
.+.+.|.++++++ .+|..+. ++|++|||++|+|++..+..|.++++|++|+|++|+++. +| .++.+++|++|+|+
T Consensus 11 ~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 11 SHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDLS 85 (266)
T ss_dssp TCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEECC
T ss_pred CCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-cccccccccccccc
Confidence 3455677777777 4565554 467777777777776666677777777777777777763 33 24566677777777
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCC
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~ 261 (955)
+|.+++ .|..+.++++|++|++++|.+.+ ..+..+..+.++++|++++|.+....
T Consensus 86 ~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~------------------------~~~~~~~~l~~l~~L~l~~n~l~~l~ 140 (266)
T d1p9ag_ 86 HNQLQS-LPLLGQTLPALTVLDVSFNRLTS------------------------LPLGALRGLGELQELYLKGNELKTLP 140 (266)
T ss_dssp SSCCSS-CCCCTTTCTTCCEEECCSSCCCC------------------------CCSSTTTTCTTCCEEECTTSCCCCCC
T ss_pred cccccc-cccccccccccccccccccccce------------------------eeccccccccccccccccccccceec
Confidence 776663 35556666666666666666554 33344556677788888888888777
Q ss_pred CccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCC
Q 002186 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (955)
Q Consensus 262 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (955)
+..+..+++|+.|++++|++++..+..|..+++|++|+|++|+|+ .+|+.+..+++|+.|+|++|.+.
T Consensus 141 ~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 141 PGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp TTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 777888999999999999999988888999999999999999999 68888899999999999999875
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.84 E-value=3.2e-22 Score=199.50 Aligned_cols=166 Identities=11% Similarity=0.024 Sum_probs=117.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc-------------------hHHHHHHHHHHHhccCCCCceeEeEEE
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-------------------RIKIVSEFITRIGTVRHKNLIRLLGFC 755 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~-------------------~~~~~~~e~~~l~~l~H~niv~l~g~~ 755 (955)
..+.||+|+||+||+|+.++|+.||||+++.+.. .......|...+.+++|++++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence 4578999999999999999999999998753210 012345678889999999999988664
Q ss_pred EcCCeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 756 YNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 756 ~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
. .++||||++++.+.+ .+......++.|+++|++|||+. +|+||||||+|||++++ .++++|||.|.
T Consensus 84 ~----~~lvme~~~~~~~~~-----l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~~liDFG~a~ 150 (191)
T d1zara2 84 G----NAVLMELIDAKELYR-----VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GIWIIDFPQSV 150 (191)
T ss_dssp T----TEEEEECCCCEEGGG-----CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EEEECCCTTCE
T ss_pred C----CEEEEEeeccccccc-----hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CEEEEECCCcc
Confidence 2 379999999866543 23344567899999999999999 99999999999999865 58999999986
Q ss_pred cccccCCCCcccccccCchhhhhccCCcccccchhHHHH
Q 002186 836 LTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEI 874 (955)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvv 874 (955)
.........-....-....+++ ..++..++||||..--
T Consensus 151 ~~~~~~~~~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~ 188 (191)
T d1zara2 151 EVGEEGWREILERDVRNIITYF-SRTYRTEKDINSAIDR 188 (191)
T ss_dssp ETTSTTHHHHHHHHHHHHHHHH-HHHHCCCCCHHHHHHH
T ss_pred cCCCCCcHHHHHHHHHHHHHHH-cCCCCCcccHHHHHHH
Confidence 5421110000000000001222 3456788999998643
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.79 E-value=2.7e-17 Score=180.27 Aligned_cols=296 Identities=23% Similarity=0.293 Sum_probs=154.4
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
++++|||++|.++ .+|+. +++|++|+|++|+|+ .+|+. +.+|+.|++++|+++. ++. + .+.|++|+++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~~-l~~-l--p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLKA-LSD-L--PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CCS-C--CTTCCEEECC
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccch-hhh-h--cccccccccc
Confidence 5778888888887 46643 468888999998888 56754 3578888888888773 332 1 1358888888
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCC
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~ 261 (955)
+|.+. .+|. ++.+++|++|++++|.+.... . ....+..+.+..+... .+..+..++.++.+++++|.....
T Consensus 107 ~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~-~---~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~~- 177 (353)
T d1jl5a_ 107 NNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLP-D---LPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKKL- 177 (353)
T ss_dssp SSCCS-SCCC-CTTCTTCCEEECCSSCCSCCC-C---CCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSSC-
T ss_pred ccccc-cccc-hhhhccceeeccccccccccc-c---ccccccchhhcccccc--ccccccccccceeccccccccccc-
Confidence 88887 4554 678888888888888775432 2 1234444444433322 122344455555555555544321
Q ss_pred CccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCC
Q 002186 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341 (955)
Q Consensus 262 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 341 (955)
+.. ....+.+....+.+. .++ .+..++.|+.+++++|.... ++. .. .
T Consensus 178 ~~~---~~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~~-~~~---~~------------------------~ 224 (353)
T d1jl5a_ 178 PDL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPD---LP------------------------P 224 (353)
T ss_dssp CCC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCS---CC------------------------T
T ss_pred ccc---ccccccccccccccc-ccc-cccccccccccccccccccc-ccc---cc------------------------c
Confidence 111 112233333333222 111 23344444444444444332 111 12 2
Q ss_pred CccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECc
Q 002186 342 SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLE 421 (955)
Q Consensus 342 ~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls 421 (955)
++..+.+..|.+... +. ....+...++..+.+.+. +.. ........+..+.+.+. ...+++|++|+|+
T Consensus 225 ~l~~~~~~~~~~~~~-~~---~~~~l~~~~~~~~~~~~l-~~l---~~~~~~~~~~~~~~~~~----~~~~~~L~~L~Ls 292 (353)
T d1jl5a_ 225 SLEALNVRDNYLTDL-PE---LPQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSL----CDLPPSLEELNVS 292 (353)
T ss_dssp TCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEE----CCCCTTCCEEECC
T ss_pred ccccccccccccccc-cc---cccccccccccccccccc-ccc---cchhcccccccCccccc----cccCCCCCEEECC
Confidence 344444444444321 11 122334444444433321 100 01112223333333221 2235677777777
Q ss_pred CCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCC
Q 002186 422 DNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNN 471 (955)
Q Consensus 422 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N 471 (955)
+|+++ .+|. .+++|+.|+|++|+++ .+|.. +.+|++|++++|
T Consensus 293 ~N~l~-~lp~---~~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N 334 (353)
T d1jl5a_ 293 NNKLI-ELPA---LPPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYN 334 (353)
T ss_dssp SSCCS-CCCC---CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSS
T ss_pred CCccC-cccc---ccCCCCEEECCCCcCC-ccccc---cCCCCEEECcCC
Confidence 77776 4553 3567777777777776 45542 345667777776
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.76 E-value=2.5e-16 Score=172.44 Aligned_cols=53 Identities=23% Similarity=0.243 Sum_probs=28.3
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCc
Q 002186 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFS 186 (955)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~ 186 (955)
+|++|||++|.++ .+|+. +++|++|+|++|+|+ .+|..+ .+|+.|++++|.++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~ 91 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK 91 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc
Confidence 5666777776665 34532 345566666666555 344332 34455555555444
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.73 E-value=1.7e-17 Score=169.90 Aligned_cols=205 Identities=21% Similarity=0.343 Sum_probs=118.7
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
+..++++.+.+++.. .+..+.+|++|++++|.++. ++ .+..+++|++|++++|.+++..| +.++++|++|++++
T Consensus 21 ~~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~ 94 (227)
T d1h6ua2 21 AIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSG 94 (227)
T ss_dssp HHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCS
T ss_pred HHHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc--cccccccccccccc
Confidence 445567777776543 34667788888888888774 33 47788888888888888775433 77788888888888
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p 262 (955)
|.++. ++ .+.++++|++++++++...+.. .+...+.+..+.++.+.+.... .+.++++|++|++++|.+.
T Consensus 95 n~~~~-i~-~l~~l~~L~~l~l~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~---- 164 (227)
T d1h6ua2 95 NPLKN-VS-AIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVS---- 164 (227)
T ss_dssp CCCSC-CG-GGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCC----
T ss_pred ccccc-cc-cccccccccccccccccccccc--hhccccchhhhhchhhhhchhh--hhccccccccccccccccc----
Confidence 87763 33 4677788888888777665432 2344445555555444433221 1334444444444444443
Q ss_pred ccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCC
Q 002186 263 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342 (955)
Q Consensus 263 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 342 (955)
+.. .+.++++|++|+|++|++++. + .++.+++|++|++++|++++. + .+.++++
T Consensus 165 --------------------~~~--~l~~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~i-~-~l~~l~~ 218 (227)
T d1h6ua2 165 --------------------DLT--PLANLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQISDV-S-PLANTSN 218 (227)
T ss_dssp --------------------CCG--GGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCBC-G-GGTTCTT
T ss_pred --------------------cch--hhcccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCCC-c-ccccCCC
Confidence 221 244445555555555555432 2 245555555555555555432 2 2455555
Q ss_pred ccEEEcc
Q 002186 343 LEILFIW 349 (955)
Q Consensus 343 L~~L~L~ 349 (955)
|+.|+++
T Consensus 219 L~~L~ls 225 (227)
T d1h6ua2 219 LFIVTLT 225 (227)
T ss_dssp CCEEEEE
T ss_pred CCEEEee
Confidence 5555554
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=1e-17 Score=173.47 Aligned_cols=86 Identities=14% Similarity=0.149 Sum_probs=54.8
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccC-CccccCCCCCcEEeCC-CCCCCCCCchhhcCCCcceEE
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF-PGGIQSLRNLLVLDAF-SNSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~LdL~-~N~l~~~~p~~~~~L~~L~~L 178 (955)
..+++|||++|.|+...+..|.++++|++|+|++|.+...+ +..|.+++++++|++. .|++....+..|.++++|++|
T Consensus 29 ~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l 108 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 108 (242)
T ss_dssp SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccccccccc
Confidence 35677777777777555556777777777777777765543 3356666666666654 345555555556666666666
Q ss_pred EecCCCCc
Q 002186 179 NLAGSYFS 186 (955)
Q Consensus 179 ~Ls~n~l~ 186 (955)
++++|.+.
T Consensus 109 ~l~~~~l~ 116 (242)
T d1xwdc1 109 LISNTGIK 116 (242)
T ss_dssp EEESCCCC
T ss_pred ccchhhhc
Confidence 66666654
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.72 E-value=5.7e-18 Score=168.41 Aligned_cols=136 Identities=25% Similarity=0.335 Sum_probs=112.3
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccC-CccccCCCCCCEEEccCCcCC
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQF-PVEIFNLTSLISLDISRNNFS 138 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~ 138 (955)
.+-|+|..|.|+. ++++ .+|..+ .+.+++|+|++|.|++.+ +..|.++++|++|+|++|.+.
T Consensus 5 ~C~C~~~~v~Cs~------------~~L~-~iP~~l----p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~ 67 (192)
T d1w8aa_ 5 MCHCEGTTVDCTG------------RGLK-EIPRDI----PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT 67 (192)
T ss_dssp TSEEETTEEECTT------------SCCS-SCCSCC----CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCC
T ss_pred CCEEcCCEEEEeC------------CCcC-ccCCCC----CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccc
Confidence 3447777777765 2333 345433 357899999999998644 566788999999999999999
Q ss_pred ccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCC
Q 002186 139 GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ 212 (955)
Q Consensus 139 ~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 212 (955)
+..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.+...
T Consensus 68 ~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~ 141 (192)
T d1w8aa_ 68 GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred cccccccccccccceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccc
Confidence 99999999999999999999999988888899999999999999999988888899999999999999988654
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=2.6e-17 Score=170.35 Aligned_cols=208 Identities=16% Similarity=0.126 Sum_probs=161.3
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCc-hhhcCCCcceEEEecC-CCCcccCCCCc
Q 002186 116 QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP-AEISQLEHLKVLNLAG-SYFSGPIPSQF 193 (955)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p-~~~~~L~~L~~L~Ls~-n~l~~~~p~~~ 193 (955)
.+|..+. +++++|||++|+++...+..|.++++|++|++++|.+...+| ..|.+++++++|++.. |.+....+..|
T Consensus 22 ~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~ 99 (242)
T d1xwdc1 22 EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAF 99 (242)
T ss_dssp SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSE
T ss_pred CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccc
Confidence 4555443 589999999999997777789999999999999999887554 4689999999999875 67887888889
Q ss_pred CCCCCCcEEEccCCCCCCCCc-hhccCCCCCcEEecccccccCCCCccccCCC-CCcEEeccCCCCCCCCCccccCCCCC
Q 002186 194 GSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQLGNMS-EVQYLDIAGANLSGSIPKELSNLTKL 271 (955)
Q Consensus 194 ~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~l~~l~~L 271 (955)
.++++|++|++++|.+....+ ..+..++.+..+..+++.+....+..+.+++ .++.|++++|+++.. +....+.+++
T Consensus 100 ~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i-~~~~~~~~~l 178 (242)
T d1xwdc1 100 QNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI-HNCAFNGTQL 178 (242)
T ss_dssp ECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE-CTTTTTTCCE
T ss_pred cccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccccccc-ccccccchhh
Confidence 999999999999999875433 2344556666666666666554445555554 789999999999854 4444455666
Q ss_pred CEE-EeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEeccc
Q 002186 272 ESL-FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMY 326 (955)
Q Consensus 272 ~~L-~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 326 (955)
+++ ++++|+++...+..|.++++|++|+|++|+++...+..|.++++|+.+++.+
T Consensus 179 ~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 179 DELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp EEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEES
T ss_pred hccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCCC
Confidence 555 5678889876667799999999999999999976666788888888776643
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.70 E-value=6.9e-17 Score=165.32 Aligned_cols=208 Identities=23% Similarity=0.376 Sum_probs=146.5
Q ss_pred CCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEc
Q 002186 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 204 (955)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 204 (955)
.++..++++.+++++.+ .+..+.+|+.|++.+|.++. + +.+.++++|++|++++|.+++..| +..+++|+++++
T Consensus 19 ~~~~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~ 92 (227)
T d1h6ua2 19 ANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELEL 92 (227)
T ss_dssp HHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEEC
T ss_pred HHHHHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-c-hhHhcCCCCcEeecCCceeecccc--cccccccccccc
Confidence 33344556666665433 34556667777777777663 3 246667777777777776664333 666666666666
Q ss_pred cCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccccccc
Q 002186 205 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQ 284 (955)
Q Consensus 205 ~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 284 (955)
++|.++. ++ .+..+++|++++++++...+. ..+...+.++.+.++.+.+...
T Consensus 93 ~~n~~~~-------------------------i~-~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~ 144 (227)
T d1h6ua2 93 SGNPLKN-------------------------VS-AIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI 144 (227)
T ss_dssp CSCCCSC-------------------------CG-GGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC
T ss_pred ccccccc-------------------------cc-ccccccccccccccccccccc--chhccccchhhhhchhhhhchh
Confidence 6665542 11 245566666677766665543 2355667888888888887654
Q ss_pred CCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCC
Q 002186 285 VPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN 364 (955)
Q Consensus 285 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~ 364 (955)
. .+..+++|+.|++++|.+... ..++++++|+.|++++|++++. + .+..+++|++|++++|++++..| ++++
T Consensus 145 ~--~~~~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~i~~--l~~l 216 (227)
T d1h6ua2 145 S--PLAGLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQISDVSP--LANT 216 (227)
T ss_dssp G--GGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCBCGG--GTTC
T ss_pred h--hhccccccccccccccccccc--hhhcccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCCCcc--cccC
Confidence 3 467788999999999999754 3489999999999999999863 3 38899999999999999986543 8899
Q ss_pred CCCCeeecCC
Q 002186 365 SKLRWVDVST 374 (955)
Q Consensus 365 ~~L~~L~ls~ 374 (955)
++|++|++++
T Consensus 217 ~~L~~L~lsn 226 (227)
T d1h6ua2 217 SNLFIVTLTN 226 (227)
T ss_dssp TTCCEEEEEE
T ss_pred CCCCEEEeeC
Confidence 9999999974
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.69 E-value=2.1e-17 Score=164.21 Aligned_cols=130 Identities=18% Similarity=0.276 Sum_probs=112.4
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccC-CccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF-PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
++++.++++++ .+|..+. +++++|+|++|+|++.+ +..|+.+++|++|+|++|.+.+..+..+..+++|++|+|++
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 46789999998 6777664 68999999999998644 56789999999999999999998899999999999999999
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN 236 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~ 236 (955)
|+++...|..|.++++|++|+|++|+|++..|..|..+++|+++++++|.+...
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~ 141 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccc
Confidence 999988888999999999999999999987787888888888888877776543
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.68 E-value=1.3e-16 Score=160.77 Aligned_cols=182 Identities=29% Similarity=0.360 Sum_probs=106.4
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n 183 (955)
...++..+.+.+.++. ..+.+|++|++++|.+... + .+..+++|++|+|++|.+++. + .++++++|++|++++|
T Consensus 27 i~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n 100 (210)
T d1h6ta2 27 IKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDEN 100 (210)
T ss_dssp HHHHTTCSCTTSEECH--HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSS
T ss_pred HHHHhCcCccCCccCH--HHhcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccCc-c-ccccCccccccccccc
Confidence 3445666666655543 3466777888888777643 2 367777777777777777753 3 3567777777777777
Q ss_pred CCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCc
Q 002186 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (955)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 263 (955)
.+++ +| .+.++++|+.|++++|.+.. + ..+..+++++.+++++| .+++ +.
T Consensus 101 ~i~~-l~-~l~~l~~L~~L~l~~~~~~~-~-~~l~~l~~l~~l~~~~n------------------------~l~~--~~ 150 (210)
T d1h6ta2 101 KVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNN------------------------KITD--IT 150 (210)
T ss_dssp CCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSS------------------------CCCC--CG
T ss_pred cccc-cc-cccccccccccccccccccc-c-ccccccccccccccccc------------------------cccc--cc
Confidence 7764 33 46777777777777776642 1 23444444444444444 4432 12
Q ss_pred cccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecc
Q 002186 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325 (955)
Q Consensus 264 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 325 (955)
.+..+++|+++++++|++++.. .+.++++|++|+|++|+++. +| .+.++++|++|+|+
T Consensus 151 ~~~~l~~L~~l~l~~n~l~~i~--~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 151 VLSRLTKLDTLSLEDNQISDIV--PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp GGGGCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred cccccccccccccccccccccc--cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEcc
Confidence 2344455555555555554322 24555556666666665553 23 35566666666654
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=1.4e-19 Score=206.52 Aligned_cols=108 Identities=18% Similarity=0.252 Sum_probs=56.1
Q ss_pred CcEEECCCCcCcccC-CccccCCCCCCEEEccCCcCCc----cCCccccCCCCCcEEeCCCCCCCCC----Cchhhc-CC
Q 002186 103 LVDLNLSHNSFSGQF-PVEIFNLTSLISLDISRNNFSG----HFPGGIQSLRNLLVLDAFSNSFSGS----VPAEIS-QL 172 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~LdL~~N~l~~~----~p~~~~-~L 172 (955)
|+.||+++|++++.. ..-+..+++|++|+|++|.++. .++..+..+++|++|||++|.++.. +...+. ..
T Consensus 4 l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~ 83 (460)
T d1z7xw1 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPS 83 (460)
T ss_dssp EEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTT
T ss_pred CCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCC
Confidence 556666666665421 2223445666666666665542 2333455566666666666655421 111111 12
Q ss_pred CcceEEEecCCCCccc----CCCCcCCCCCCcEEEccCCCCC
Q 002186 173 EHLKVLNLAGSYFSGP----IPSQFGSFKSLEFLHLAGNLLN 210 (955)
Q Consensus 173 ~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 210 (955)
.+|++|+|++|.++.. ++..+..+++|++|+|++|.++
T Consensus 84 ~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 84 CKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence 3566666666666432 3344556666666666666553
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.66 E-value=5.1e-16 Score=155.03 Aligned_cols=179 Identities=25% Similarity=0.389 Sum_probs=105.4
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n 183 (955)
..++++.+.+++.++ ...+.+|++|++++|.+.. + +.+..+++|++||+++|++++..| ++++++|++|++++|
T Consensus 21 i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n 94 (199)
T d2omxa2 21 MKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNN 94 (199)
T ss_dssp HHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCccc--ccCCccccccccccc
Confidence 344566666665443 2456777777777777764 2 246677777777777777765322 677777777777777
Q ss_pred CCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCc
Q 002186 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (955)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 263 (955)
.+.. ++ .+.++++|++|++++|.+... ..+ ..+++|+.|++++|.+.. + +
T Consensus 95 ~~~~-~~-~l~~l~~L~~L~l~~~~~~~~--~~~------------------------~~l~~L~~L~l~~n~l~~-~-~ 144 (199)
T d2omxa2 95 QIAD-IT-PLANLTNLTGLTLFNNQITDI--DPL------------------------KNLTNLNRLELSSNTISD-I-S 144 (199)
T ss_dssp CCCC-CG-GGTTCTTCSEEECCSSCCCCC--GGG------------------------TTCTTCSEEECCSSCCCC-C-G
T ss_pred cccc-cc-ccccccccccccccccccccc--ccc------------------------chhhhhHHhhhhhhhhcc-c-c
Confidence 6653 22 366777777777776665432 123 344445555555555442 2 2
Q ss_pred cccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEE
Q 002186 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLL 322 (955)
Q Consensus 264 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 322 (955)
.+..+++|++|++.+|++++.. .+.++++|++|++++|+++. ++ .++.+++|+.|
T Consensus 145 ~l~~~~~L~~L~l~~n~l~~l~--~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 145 ALSGLTSLQQLNFSSNQVTDLK--PLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred cccccccccccccccccccCCc--cccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence 3555556666666666655432 25566666666666666654 22 35666666654
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.66 E-value=4.8e-16 Score=156.60 Aligned_cols=164 Identities=21% Similarity=0.254 Sum_probs=123.3
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+..|+.|++++|.++... .+..+++|++|+|++|++++.. .++.+++|++|++++|++++ +| .+.++++|+.|+
T Consensus 45 L~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~ 118 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (210)
T ss_dssp HHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred hcCccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccCcc--ccccCccccccccccccccc-cc-cccccccccccc
Confidence 567999999999998543 4788999999999999998743 47899999999999999985 44 589999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
+++|.+.. ...+..+++|+.+++++|.+++ +..+..+++|+.+++++|.+.+. + .+.++++|+.|++++|.++.
T Consensus 119 l~~~~~~~--~~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i-~-~l~~l~~L~~L~Ls~N~i~~ 192 (210)
T d1h6ta2 119 LEHNGISD--INGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDI-V-PLAGLTKLQNLYLSKNHISD 192 (210)
T ss_dssp CTTSCCCC--CGGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCB
T ss_pred cccccccc--cccccccccccccccccccccc--ccccccccccccccccccccccc-c-cccCCCCCCEEECCCCCCCC
Confidence 99999864 3468899999999999999875 33455666677777766666542 2 25556666666666666553
Q ss_pred CCCccccCCCCCCEEEec
Q 002186 260 SIPKELSNLTKLESLFLF 277 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~ 277 (955)
+| .+.++++|++|+|+
T Consensus 193 -l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 193 -LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp -CG-GGTTCTTCSEEEEE
T ss_pred -Ch-hhcCCCCCCEEEcc
Confidence 33 35555666666554
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.64 E-value=1.3e-15 Score=152.03 Aligned_cols=161 Identities=22% Similarity=0.363 Sum_probs=121.4
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+..++.|++++|.++. ++ .+..+++|++|+|++|++++..| ++++++|++|++++|.+.. ++ .+.++++|++|+
T Consensus 39 l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~ 112 (199)
T d2omxa2 39 LDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLT 112 (199)
T ss_dssp HTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEE
T ss_pred hcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-cccccccccccc
Confidence 5789999999999874 33 57889999999999999987543 8999999999999999874 44 488999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
+++|.+... ..+..+++|+.|++++|.+.. ++ .+..+++|+.|++.+|.+++. + .++++++|++|++++|+++.
T Consensus 113 l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~~-~l~~~~~L~~L~l~~n~l~~l-~-~l~~l~~L~~L~ls~N~i~~ 186 (199)
T d2omxa2 113 LFNNQITDI--DPLKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLNFSSNQVTDL-K-PLANLTTLERLDISSNKVSD 186 (199)
T ss_dssp CCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC
T ss_pred ccccccccc--cccchhhhhHHhhhhhhhhcc-cc-cccccccccccccccccccCC-c-cccCCCCCCEEECCCCCCCC
Confidence 999988753 348899999999999999864 33 466677777777777766542 2 25566666666666666553
Q ss_pred CCCccccCCCCCCEE
Q 002186 260 SIPKELSNLTKLESL 274 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L 274 (955)
++ .+..+++|++|
T Consensus 187 -i~-~l~~L~~L~~L 199 (199)
T d2omxa2 187 -IS-VLAKLTNLESL 199 (199)
T ss_dssp -CG-GGGGCTTCSEE
T ss_pred -Cc-cccCCCCCCcC
Confidence 22 35555555543
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=1.2e-18 Score=198.67 Aligned_cols=109 Identities=17% Similarity=0.184 Sum_probs=79.8
Q ss_pred CCCEEEccCCcCCccC-CccccCCCCCcEEeCCCCCCCC----CCchhhcCCCcceEEEecCCCCccc----CCCCcC-C
Q 002186 126 SLISLDISRNNFSGHF-PGGIQSLRNLLVLDAFSNSFSG----SVPAEISQLEHLKVLNLAGSYFSGP----IPSQFG-S 195 (955)
Q Consensus 126 ~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~LdL~~N~l~~----~~p~~~~~L~~L~~L~Ls~n~l~~~----~p~~~~-~ 195 (955)
+|++||+++|+++... ..-+..+++|++|+|++|.++. .+...+..+++|++|||++|.++.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 6889999999998632 3345678899999999998873 3345577889999999999988531 223333 3
Q ss_pred CCCCcEEEccCCCCCCC----CchhccCCCCCcEEeccccccc
Q 002186 196 FKSLEFLHLAGNLLNDQ----IPAELGMLKTVTHMEIGYNFYQ 234 (955)
Q Consensus 196 l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~l~~n~l~ 234 (955)
..+|++|+|++|.+++. ++..+..+++|++|++++|.+.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence 35799999999988653 4455667778888888877654
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.48 E-value=6.9e-14 Score=127.03 Aligned_cols=103 Identities=27% Similarity=0.365 Sum_probs=79.3
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n 183 (955)
|+|||++|+++ .++ .+..+++|++||+++|+++ .+|..|+.+++|++|++++|.+++ +| .+.++++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 57888888887 444 4788888888888888887 467778888888888888888874 44 4788888888888888
Q ss_pred CCcccC-CCCcCCCCCCcEEEccCCCCCC
Q 002186 184 YFSGPI-PSQFGSFKSLEFLHLAGNLLND 211 (955)
Q Consensus 184 ~l~~~~-p~~~~~l~~L~~L~L~~N~l~~ 211 (955)
.++... ...++.+++|++|++++|.++.
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 887533 2457778888888888887753
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=4.8e-15 Score=156.63 Aligned_cols=236 Identities=19% Similarity=0.217 Sum_probs=110.2
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCcc-CCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH-FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
.+..+.++...+...+ .......+|++|||+++.+... ++..+..+++|++|+|+++.++...+..+.++++|++|+|
T Consensus 24 ~~~~lrl~~~~~~~~~-~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 102 (284)
T d2astb2 24 GVIAFRCPRSFMDQPL-AEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 102 (284)
T ss_dssp TCSEEECTTCEECSCC-CSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred cceEeeccccccccch-hhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccc
Confidence 3455555555443222 2233455677777777666533 2334566677777777777666655666666667777777
Q ss_pred cCC-CCccc-CCCCcCCCCCCcEEEccCCC-CCCC-CchhccC-CCCCcEEecccccccCCCCccccCCCCCcEEeccCC
Q 002186 181 AGS-YFSGP-IPSQFGSFKSLEFLHLAGNL-LNDQ-IPAELGM-LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGA 255 (955)
Q Consensus 181 s~n-~l~~~-~p~~~~~l~~L~~L~L~~N~-l~~~-~p~~l~~-l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n 255 (955)
+++ .++.. +..-+.++++|++|+++++. ++.. ++..+.. .++|+.|+++++. +
T Consensus 103 s~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~----------------------~ 160 (284)
T d2astb2 103 SGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR----------------------K 160 (284)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG----------------------G
T ss_pred cccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhcccc----------------------c
Confidence 663 33311 11123455666666666642 3211 1111222 2345555554321 0
Q ss_pred CCCCC-CCccccCCCCCCEEEeccc-cccccCCccCcCCCccCEEEccCC-CCCCCCCcccCCCCCCcEEecccccCCCC
Q 002186 256 NLSGS-IPKELSNLTKLESLFLFRN-QLAGQVPWEFSRVTTLKSLDLSDN-RLSGPIPESFADLKNLRLLSLMYNEMSGT 332 (955)
Q Consensus 256 ~l~~~-~p~~l~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 332 (955)
.++.. +.....++++|++|++++| .+++.....+.++++|++|+|+++ .++......++.+++|+.|+++++--.+.
T Consensus 161 ~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~~~d~~ 240 (284)
T d2astb2 161 NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGT 240 (284)
T ss_dssp GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTSSCTTC
T ss_pred ccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCCCCHHH
Confidence 11110 1111223444555555443 234333344445555555555552 34433334455555666666555411111
Q ss_pred CccccCCCCCccEEEccCCcCcccCCcccCC
Q 002186 333 VPESLVQLPSLEILFIWNNYFSGSLPENLGR 363 (955)
Q Consensus 333 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 363 (955)
++.....+|+|+ +..+.+++..++.++.
T Consensus 241 l~~l~~~lp~L~---i~~~~ls~~~~~~~~~ 268 (284)
T d2astb2 241 LQLLKEALPHLQ---INCSHFTTIARPTIGN 268 (284)
T ss_dssp HHHHHHHSTTSE---ESCCCSCCTTCSSCSS
T ss_pred HHHHHHhCcccc---ccCccCCCCCCCccCc
Confidence 222222344443 3455555544444443
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=5.6e-15 Score=156.16 Aligned_cols=256 Identities=19% Similarity=0.223 Sum_probs=156.5
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCC-CchhhcCCCcceEEEecC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS-VPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~-~p~~~~~L~~L~~L~Ls~ 182 (955)
+.|||+++.+.......+.. ..+..+.++.......+. ......+|++|||+++.++.. ++..+.++++|++|+|++
T Consensus 3 ~~lDLs~~~l~~~~l~~l~~-~~~~~lrl~~~~~~~~~~-~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~ 80 (284)
T d2astb2 3 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 80 (284)
T ss_dssp SEEECTTCBCCHHHHHHHHH-TTCSEEECTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred CEEECCCCCCCchHHHHHHh-ccceEeeccccccccchh-hhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence 46788877765332222221 234566666655543322 233456788888887776643 234456777888888888
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCC-CCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCC-CCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGN-LLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGAN-LSGS 260 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~-l~~~ 260 (955)
+.++...+..++.+++|++|+++++ .++... +.....++++|++|+++++. ++..
T Consensus 81 ~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~-----------------------l~~l~~~~~~L~~L~ls~c~~~~~~ 137 (284)
T d2astb2 81 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFA-----------------------LQTLLSSCSRLDELNLSWCFDFTEK 137 (284)
T ss_dssp CBCCHHHHHHHTTCTTCSEEECTTCBSCCHHH-----------------------HHHHHHHCTTCCEEECCCCTTCCHH
T ss_pred cCCCcHHHHHHhcCCCCcCccccccccccccc-----------------------cchhhHHHHhccccccccccccccc
Confidence 7777666667777777777777774 343210 11112334556666665542 2211
Q ss_pred -CCccccC-CCCCCEEEeccc--ccccc-CCccCcCCCccCEEEccCC-CCCCCCCcccCCCCCCcEEecccc-cCCCCC
Q 002186 261 -IPKELSN-LTKLESLFLFRN--QLAGQ-VPWEFSRVTTLKSLDLSDN-RLSGPIPESFADLKNLRLLSLMYN-EMSGTV 333 (955)
Q Consensus 261 -~p~~l~~-l~~L~~L~L~~N--~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~ 333 (955)
+...+.. .++|+.|+++++ .++.. +...+.++++|++|++++| .+++.....+..+++|++|+++++ .+++..
T Consensus 138 ~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~ 217 (284)
T d2astb2 138 HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPET 217 (284)
T ss_dssp HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGG
T ss_pred cchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHH
Confidence 1112222 467899998864 33321 2222456889999999986 577677778899999999999994 677666
Q ss_pred ccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCC
Q 002186 334 PESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICS 387 (955)
Q Consensus 334 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~ 387 (955)
...++++++|+.|+++++--.+.++.....+++ |++..+.++...++.++.
T Consensus 218 l~~L~~~~~L~~L~l~~~~~d~~l~~l~~~lp~---L~i~~~~ls~~~~~~~~~ 268 (284)
T d2astb2 218 LLELGEIPTLKTLQVFGIVPDGTLQLLKEALPH---LQINCSHFTTIARPTIGN 268 (284)
T ss_dssp GGGGGGCTTCCEEECTTSSCTTCHHHHHHHSTT---SEESCCCSCCTTCSSCSS
T ss_pred HHHHhcCCCCCEEeeeCCCCHHHHHHHHHhCcc---ccccCccCCCCCCCccCc
Confidence 677888999999999887222222222223344 556778888766665543
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=5.7e-14 Score=134.28 Aligned_cols=105 Identities=21% Similarity=0.146 Sum_probs=46.5
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
.++.|||++|+|+. +|..+..+++|++|||++|+++.. + .|..+++|++|++++|.++...+..+..+++|++|+|+
T Consensus 19 ~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~l-~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~ 95 (162)
T d1a9na_ 19 RDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL-D-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 95 (162)
T ss_dssp SCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE-C-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred cCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCcc-C-CcccCcchhhhhcccccccCCCccccccccccccceec
Confidence 34555555555542 233334455555555555554432 1 24444455555555555443333333444444444444
Q ss_pred CCCCcccCC-CCcCCCCCCcEEEccCCCC
Q 002186 182 GSYFSGPIP-SQFGSFKSLEFLHLAGNLL 209 (955)
Q Consensus 182 ~n~l~~~~p-~~~~~l~~L~~L~L~~N~l 209 (955)
+|.++.... ..+..+++|++|++++|.+
T Consensus 96 ~N~i~~~~~l~~l~~l~~L~~L~l~~N~i 124 (162)
T d1a9na_ 96 NNSLVELGDLDPLASLKSLTYLCILRNPV 124 (162)
T ss_dssp SCCCCCGGGGGGGGGCTTCCEEECCSSGG
T ss_pred cccccccccccccccccccchhhcCCCcc
Confidence 444432111 2334444444444444443
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=7.2e-14 Score=133.55 Aligned_cols=131 Identities=18% Similarity=0.105 Sum_probs=110.2
Q ss_pred cccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCC
Q 002186 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL 199 (955)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L 199 (955)
.|.+..+|++|||++|+|+. +|..+..+++|++|||++|.++. + +.+..+++|++|++++|.++...+..+..+++|
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~-l-~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCc-c-CCcccCcchhhhhcccccccCCCcccccccccc
Confidence 57788899999999999985 47777889999999999999985 4 358999999999999999997666667889999
Q ss_pred cEEEccCCCCCCCCc-hhccCCCCCcEEecccccccCCC---CccccCCCCCcEEecc
Q 002186 200 EFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNI---PWQLGNMSEVQYLDIA 253 (955)
Q Consensus 200 ~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~g~~---p~~~~~l~~L~~L~Ls 253 (955)
++|++++|+++..-. ..+..+++|+++++++|.+.... +..+..+++|++||-.
T Consensus 90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD~~ 147 (162)
T d1a9na_ 90 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQ 147 (162)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTE
T ss_pred ccceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeCCC
Confidence 999999999975322 46889999999999999886432 2357889999999843
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.40 E-value=6.9e-13 Score=120.29 Aligned_cols=102 Identities=17% Similarity=0.209 Sum_probs=77.8
Q ss_pred CEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCC
Q 002186 128 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGN 207 (955)
Q Consensus 128 ~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N 207 (955)
|+|||++|+++. +| .++.+++|++||+++|.++ .+|+.++.+++|++|++++|.++. +| .|+++++|++|++++|
T Consensus 1 R~L~Ls~n~l~~-l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTV-LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSS-CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCCC-Cc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 678999999983 44 4888899999999999987 467788889999999999998885 44 4888888999999888
Q ss_pred CCCCCC-chhccCCCCCcEEeccccccc
Q 002186 208 LLNDQI-PAELGMLKTVTHMEIGYNFYQ 234 (955)
Q Consensus 208 ~l~~~~-p~~l~~l~~L~~L~l~~n~l~ 234 (955)
+++... ...+..+++|+.+++++|.+.
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 887532 234566666666666666554
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.34 E-value=3e-14 Score=155.34 Aligned_cols=89 Identities=22% Similarity=0.271 Sum_probs=39.6
Q ss_pred cCCCccCEEEccCCCCCCC----CCcccCCCCCCcEEecccccCCCCCc----cccC--CCCCccEEEccCCcCccc---
Q 002186 290 SRVTTLKSLDLSDNRLSGP----IPESFADLKNLRLLSLMYNEMSGTVP----ESLV--QLPSLEILFIWNNYFSGS--- 356 (955)
Q Consensus 290 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~l~--~l~~L~~L~L~~N~l~~~--- 356 (955)
..+++|+.|+|++|.++.. +...+...++|+.|++++|.+++.-. ..+. ..+.|+.|++++|+++..
T Consensus 212 ~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~ 291 (344)
T d2ca6a1 212 AYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVR 291 (344)
T ss_dssp GGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHH
T ss_pred cchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHH
Confidence 3344444555554444311 12233444555555555555442211 1111 124466666666655432
Q ss_pred -CCccc-CCCCCCCeeecCCCccc
Q 002186 357 -LPENL-GRNSKLRWVDVSTNNFN 378 (955)
Q Consensus 357 -~p~~~-~~~~~L~~L~ls~N~l~ 378 (955)
+...+ .+.++|+.|++++|.+.
T Consensus 292 ~l~~~l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 292 TLKTVIDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp HHHHHHHHHCTTCCEEECTTSBSC
T ss_pred HHHHHHHccCCCCCEEECCCCcCC
Confidence 11122 13456666666666664
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.33 E-value=6.6e-14 Score=152.56 Aligned_cols=236 Identities=17% Similarity=0.157 Sum_probs=119.5
Q ss_pred CCCCcEEECCCCcCccc----CCccccCCCCCCEEEccCCcCCcc----------CCccccCCCCCcEEeCCCCCCCCCC
Q 002186 100 FNELVDLNLSHNSFSGQ----FPVEIFNLTSLISLDISRNNFSGH----------FPGGIQSLRNLLVLDAFSNSFSGSV 165 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----------~p~~~~~l~~L~~LdL~~N~l~~~~ 165 (955)
...|+.|+|++|.+... +...+...++|+.|+++++..... +...+...++|+.|||++|.++..-
T Consensus 30 ~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 109 (344)
T d2ca6a1 30 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 109 (344)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccccccc
Confidence 34566666666665421 223345566666666665543211 1122344555666666666555432
Q ss_pred ----chhhcCCCcceEEEecCCCCcccCCC-------------CcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEec
Q 002186 166 ----PAEISQLEHLKVLNLAGSYFSGPIPS-------------QFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEI 228 (955)
Q Consensus 166 ----p~~~~~L~~L~~L~Ls~n~l~~~~p~-------------~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l 228 (955)
...+...++|++|++++|.+...-.. .....+.|+.|++++|.++...-.
T Consensus 110 ~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~------------- 176 (344)
T d2ca6a1 110 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMK------------- 176 (344)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHH-------------
T ss_pred ccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccc-------------
Confidence 22233455566666666554311000 012334455555555544321110
Q ss_pred ccccccCCCCccccCCCCCcEEeccCCCCCCC-----CCccccCCCCCCEEEecccccccc----CCccCcCCCccCEEE
Q 002186 229 GYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS-----IPKELSNLTKLESLFLFRNQLAGQ----VPWEFSRVTTLKSLD 299 (955)
Q Consensus 229 ~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~-----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ 299 (955)
.+...+...+.|+.|++++|.+... +...+..+++|+.|+|++|.++.. +...+..+++|++|+
T Consensus 177 -------~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~ 249 (344)
T d2ca6a1 177 -------EWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 249 (344)
T ss_dssp -------HHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred -------cccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhh
Confidence 1122233445566666666655421 122345566677777777766432 223355667777777
Q ss_pred ccCCCCCCCCCc----ccC--CCCCCcEEecccccCCCC----CccccC-CCCCccEEEccCCcCcc
Q 002186 300 LSDNRLSGPIPE----SFA--DLKNLRLLSLMYNEMSGT----VPESLV-QLPSLEILFIWNNYFSG 355 (955)
Q Consensus 300 Ls~N~l~~~~p~----~~~--~l~~L~~L~Ls~N~l~~~----~p~~l~-~l~~L~~L~L~~N~l~~ 355 (955)
|++|.++..... .+. ..+.|+.|++++|+++.. +...+. ++++|+.|++++|.+..
T Consensus 250 Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 250 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred hhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 777776543111 122 235677788888776532 122232 45678888888887753
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.20 E-value=9.8e-14 Score=137.49 Aligned_cols=111 Identities=16% Similarity=0.177 Sum_probs=63.2
Q ss_pred CccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCC
Q 002186 118 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFK 197 (955)
Q Consensus 118 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~ 197 (955)
|.++..+++|++|+|++|+|+. ++ .|..+++|++|+|++|.++ .+|..+..+++|++|++++|.++.. +.+..++
T Consensus 41 ~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~ 115 (198)
T d1m9la_ 41 DATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL--SGIEKLV 115 (198)
T ss_dssp HHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCH--HHHHHHH
T ss_pred hhHHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccc-ccccccccccccccccccccccccc--ccccccc
Confidence 3456666666666666666653 33 3666666666666666665 3444444445666666666666532 2355566
Q ss_pred CCcEEEccCCCCCCCCc-hhccCCCCCcEEecccccc
Q 002186 198 SLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFY 233 (955)
Q Consensus 198 ~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l 233 (955)
+|++|++++|+++.... ..+..+++|+.|++++|.+
T Consensus 116 ~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l 152 (198)
T d1m9la_ 116 NLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp HSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHH
T ss_pred cccccccccchhccccccccccCCCccceeecCCCcc
Confidence 66666666666653211 2455555555555555544
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=3.6e-11 Score=113.64 Aligned_cols=88 Identities=20% Similarity=0.160 Sum_probs=40.7
Q ss_pred ccCCCCCCEEEccCC-cCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCC
Q 002186 121 IFNLTSLISLDISRN-NFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL 199 (955)
Q Consensus 121 ~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L 199 (955)
+..+++|++|++++| .++...+..|.++++|+.|+|++|+++...|.+|..+++|++|+|++|.++...+..|..+ +|
T Consensus 27 l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~~-~l 105 (156)
T d2ifga3 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGL-SL 105 (156)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSC-CC
T ss_pred ccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhccc-cc
Confidence 334444444444333 2443334444445555555555555544444445555555555555555543222233222 45
Q ss_pred cEEEccCCCC
Q 002186 200 EFLHLAGNLL 209 (955)
Q Consensus 200 ~~L~L~~N~l 209 (955)
+.|+|++|.+
T Consensus 106 ~~L~L~~Np~ 115 (156)
T d2ifga3 106 QELVLSGNPL 115 (156)
T ss_dssp CEEECCSSCC
T ss_pred cccccCCCcc
Confidence 5555555554
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.09 E-value=6.1e-13 Score=131.66 Aligned_cols=108 Identities=22% Similarity=0.242 Sum_probs=92.1
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+++|++|+|++|.|+. ++ .+..+++|++|+|++|.++ .+|..+..+++|++|++++|.++. + +.+.++++|++|+
T Consensus 47 L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l~~L~~L~ 121 (198)
T d1m9la_ 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKLVNLRVLY 121 (198)
T ss_dssp TTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHHHHSSEEE
T ss_pred ccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-ccccccccccccc
Confidence 8899999999999984 44 5899999999999999997 466666667889999999999985 3 4588899999999
Q ss_pred ecCCCCcccCC-CCcCCCCCCcEEEccCCCCCCC
Q 002186 180 LAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLNDQ 212 (955)
Q Consensus 180 Ls~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~ 212 (955)
|++|.++.... ..|..+++|++|+|++|.+...
T Consensus 122 L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 155 (198)
T d1m9la_ 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHH
T ss_pred cccchhccccccccccCCCccceeecCCCccccC
Confidence 99999985422 4689999999999999987543
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=2.3e-10 Score=107.94 Aligned_cols=109 Identities=17% Similarity=0.143 Sum_probs=76.9
Q ss_pred ccccccCcccccCCCCCCCCcCCccceEecccc-ccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECC
Q 002186 487 SLQNFSASACNITGNLPPFKSCKSISVIESHMN-NLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLS 565 (955)
Q Consensus 487 ~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l~~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 565 (955)
..+.++.++++++.....+..+++++.|++++| .++...+..|.++++|+.|+|++|+|+...|.+|..+++|++|||+
T Consensus 9 ~~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 9 GSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp SSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CCCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceecc
Confidence 344566666666654444566777777887655 4666556677788888888888888887777778888888888888
Q ss_pred CCCCccccCCCcCCCCCCcEEECCCCcceec
Q 002186 566 HNSLSGQIPAKFGSCSSLTVLNVSFNDISGS 596 (955)
Q Consensus 566 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ 596 (955)
+|+|+...+..|..+ +|+.|+|++|++...
T Consensus 89 ~N~l~~l~~~~~~~~-~l~~L~L~~Np~~C~ 118 (156)
T d2ifga3 89 FNALESLSWKTVQGL-SLQELVLSGNPLHCS 118 (156)
T ss_dssp SSCCSCCCSTTTCSC-CCCEEECCSSCCCCC
T ss_pred CCCCcccChhhhccc-cccccccCCCcccCC
Confidence 888876666666544 578888888877643
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.23 E-value=2.5e-08 Score=94.37 Aligned_cols=107 Identities=20% Similarity=0.143 Sum_probs=55.7
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCC--chhhcCCCcceEEE
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV--PAEISQLEHLKVLN 179 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~--p~~~~~L~~L~~L~ 179 (955)
+.+.||++++... ..+..+..+..|+...|.. ..++..+..+++|++|||++|+++..- +..+..+++|++|+
T Consensus 23 ~~~~Ldls~l~~~----~~l~~~~~~~~l~~~~~~~-~~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~ 97 (162)
T d1koha1 23 SQQALDLKGLRSD----PDLVAQNIDVVLNRRSSMA-ATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILN 97 (162)
T ss_dssp SSCCBCCCCCSSC----TTTTTTTCCCCTTSHHHHH-HHHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCC
T ss_pred hhCeeecccCCCC----chhhhccchhhcchhhhHh-hhhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccc
Confidence 3445566554321 1233344444444444332 223333455666777777777766432 33455666777777
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQI 213 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 213 (955)
|++|.++...+-.+....+|+.|++++|.+....
T Consensus 98 Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~ 131 (162)
T d1koha1 98 LSGNELKSERELDKIKGLKLEELWLDGNSLSDTF 131 (162)
T ss_dssp CTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSS
T ss_pred cccCccccchhhhhhhccccceeecCCCCcCcCc
Confidence 7777666433222333445666777777665443
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.09 E-value=8.1e-08 Score=90.68 Aligned_cols=105 Identities=17% Similarity=0.106 Sum_probs=61.1
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCccc--CCCCcCCCCCCcEEE
Q 002186 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP--IPSQFGSFKSLEFLH 203 (955)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~--~p~~~~~l~~L~~L~ 203 (955)
..+.||++++... ..+..+..+..|+...+... .++..+.++++|++|+|++|.++.. ++..+..+++|+.|+
T Consensus 23 ~~~~Ldls~l~~~----~~l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~ 97 (162)
T d1koha1 23 SQQALDLKGLRSD----PDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILN 97 (162)
T ss_dssp SSCCBCCCCCSSC----TTTTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCC
T ss_pred hhCeeecccCCCC----chhhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccc
Confidence 4566777765432 22444455555555444332 3344456788888888888888753 234566788888888
Q ss_pred ccCCCCCCCCchhccCCCCCcEEecccccccC
Q 002186 204 LAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (955)
Q Consensus 204 L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g 235 (955)
|++|.++..-+-......+|+.+++++|.+..
T Consensus 98 Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~ 129 (162)
T d1koha1 98 LSGNELKSERELDKIKGLKLEELWLDGNSLSD 129 (162)
T ss_dssp CTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSS
T ss_pred cccCccccchhhhhhhccccceeecCCCCcCc
Confidence 88888875433232233345555555554443
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.74 E-value=6.6e-05 Score=76.23 Aligned_cols=132 Identities=18% Similarity=0.066 Sum_probs=86.4
Q ss_pred cCCCC-CceEEEeCCCCcEEEEEEeeccc-chHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCCCChhHH
Q 002186 700 ARPQS-AAGCKAVLPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEK 776 (955)
Q Consensus 700 g~g~~-g~vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~~ 776 (955)
.+|.. +.||+... ++..+.||+..... .....+.+|...+..+. |=-+-++++++.+++..++||||+++..+.+.
T Consensus 22 ~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~ 100 (263)
T d1j7la_ 22 TEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEE 100 (263)
T ss_dssp SCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred CCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccc
Confidence 34544 57898875 45567788875432 22334566777765553 22245677888888899999999999887665
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHHHhcCC----------------------------------------------------
Q 002186 777 IRTKRDWAAKYKIVLGVARGLCFLHHDC---------------------------------------------------- 804 (955)
Q Consensus 777 l~~~~~~~~~~~i~~~ia~gl~~lH~~~---------------------------------------------------- 804 (955)
...... ...++.++++.++.||+..
T Consensus 101 ~~~~~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 177 (263)
T d1j7la_ 101 YEDEQS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTE 177 (263)
T ss_dssp TTTCSC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHS
T ss_pred cccccc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhc
Confidence 433222 2234455555555555321
Q ss_pred ----CCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 805 ----YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 805 ----~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
.+.++|+|+.|.||+++++..+-|.||+.+.
T Consensus 178 ~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 178 KPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 1237899999999999987667799999764
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.50 E-value=8.8e-05 Score=74.89 Aligned_cols=135 Identities=17% Similarity=0.111 Sum_probs=81.3
Q ss_pred ccCCCC-CceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCC--CCceeEeEEEEcCCeeEEEEeecCCCChhH
Q 002186 699 AARPQS-AAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRH--KNLIRLLGFCYNRHQAYLLYDYLPNGNLSE 775 (955)
Q Consensus 699 ~g~g~~-g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv~ey~~~gsL~~ 775 (955)
+..|.. +.||+....+|..+.+|.-..+. ...+..|.+.++.+.. --+-++++++.+++..++||||+++-++.+
T Consensus 18 ~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~ 95 (255)
T d1nd4a_ 18 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS 95 (255)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTT
T ss_pred cCCcccCCeEEEEEeCCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccccc
Confidence 344554 57899998888888889765432 2235556666655432 234567888888889999999998766533
Q ss_pred Hh-----------------hc----C----CCHHHHHHHH--------------------HHHHHHHHHHhcCC----CC
Q 002186 776 KI-----------------RT----K----RDWAAKYKIV--------------------LGVARGLCFLHHDC----YP 806 (955)
Q Consensus 776 ~l-----------------~~----~----~~~~~~~~i~--------------------~~ia~gl~~lH~~~----~~ 806 (955)
.- |. . ..+.....-. ......+..+.... .+
T Consensus 96 ~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (255)
T d1nd4a_ 96 SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDL 175 (255)
T ss_dssp SCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCE
T ss_pred ccccHHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhCCccCCc
Confidence 11 10 0 0111110000 00111222222211 12
Q ss_pred CcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 807 AIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 807 ~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
.++|+|+.|.||+++.+..+-|.||+.+.
T Consensus 176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~~ 204 (255)
T d1nd4a_ 176 VVTHGDACLPNIMVENGRFSGFIDCGRLG 204 (255)
T ss_dssp EEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred eEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence 47999999999999987667899999764
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.36 E-value=4.9e-05 Score=71.34 Aligned_cols=66 Identities=11% Similarity=0.098 Sum_probs=33.2
Q ss_pred ccCCCCCcEEeCCCCCCCC----CCchhhcCCCcceEEEecCCCCccc----CCCCcCCCCCCcEEEccCCCCC
Q 002186 145 IQSLRNLLVLDAFSNSFSG----SVPAEISQLEHLKVLNLAGSYFSGP----IPSQFGSFKSLEFLHLAGNLLN 210 (955)
Q Consensus 145 ~~~l~~L~~LdL~~N~l~~----~~p~~~~~L~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 210 (955)
+...+.|++|+|++|.+.. .+...+...+.|++|+|++|.++.. +-..+...++|++|+|++|.+.
T Consensus 40 L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 40 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSC
T ss_pred HhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCC
Confidence 3344455555555555432 1122334445566666666665432 1223455566667777666543
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.29 E-value=2.7e-05 Score=73.11 Aligned_cols=108 Identities=13% Similarity=0.061 Sum_probs=75.5
Q ss_pred CCCCcEEECCCC-cCccc----CCccccCCCCCCEEEccCCcCCcc----CCccccCCCCCcEEeCCCCCCCCC----Cc
Q 002186 100 FNELVDLNLSHN-SFSGQ----FPVEIFNLTSLISLDISRNNFSGH----FPGGIQSLRNLLVLDAFSNSFSGS----VP 166 (955)
Q Consensus 100 l~~L~~L~Ls~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~LdL~~N~l~~~----~p 166 (955)
-+.|+.|+|+++ .++.. +-..+...++|++|+|++|.+... +...+...+.|++|+|++|.++.. +-
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~ 93 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 93 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHH
Confidence 367899999874 46432 233566778999999999988632 223456678999999999998743 22
Q ss_pred hhhcCCCcceEEEecCCCCccc-------CCCCcCCCCCCcEEEccCC
Q 002186 167 AEISQLEHLKVLNLAGSYFSGP-------IPSQFGSFKSLEFLHLAGN 207 (955)
Q Consensus 167 ~~~~~L~~L~~L~Ls~n~l~~~-------~p~~~~~l~~L~~L~L~~N 207 (955)
..+...++|++|+|++|.+... +...+...++|+.|+++.+
T Consensus 94 ~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 94 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred HHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCC
Confidence 3466778899999999875421 2333445677888887665
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=96.48 E-value=0.0031 Score=67.50 Aligned_cols=75 Identities=9% Similarity=-0.058 Sum_probs=46.1
Q ss_pred hhhccCCCCCceEEEeCCC-CcEEEEEEeecc-----c---chHHHHHHHHHHHhccC---CCCceeEeEEEEcCCeeEE
Q 002186 696 CEEAARPQSAAGCKAVLPT-GITVSVKKIEWG-----A---TRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~-g~~vAvK~~~~~-----~---~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~l 763 (955)
.+.+|.|....||+....+ |+.|.||.-... . ...+....|.+.|+.+. ...+.+++++ +++..++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence 4468899999999998765 678999975321 0 11223445666665442 2345556655 4556689
Q ss_pred EEeecCCCC
Q 002186 764 LYDYLPNGN 772 (955)
Q Consensus 764 v~ey~~~gs 772 (955)
||||+++..
T Consensus 109 vmE~L~~~~ 117 (392)
T d2pula1 109 VMEDLSHLK 117 (392)
T ss_dssp EECCCTTSE
T ss_pred EEeccCCcc
Confidence 999998654
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.39 E-value=0.0033 Score=65.40 Aligned_cols=68 Identities=4% Similarity=-0.127 Sum_probs=46.9
Q ss_pred CceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCc-----eeEe--EEEEcCCeeEEEEeecCCCC
Q 002186 705 AAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-----IRLL--GFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 705 g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~ni-----v~l~--g~~~~~~~~~lv~ey~~~gs 772 (955)
-.||+++.++|..|++|.-+.+....+++.+|++.+..+....| +..- ......+..+.|++|++|..
T Consensus 36 N~vy~v~~~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~ 110 (325)
T d1zyla1 36 NRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ 110 (325)
T ss_dssp SEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred ceeEEEEcCCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence 47999999999999999987665566777788887766542221 2211 12234567889999998643
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.27 E-value=0.00041 Score=64.66 Aligned_cols=109 Identities=17% Similarity=0.200 Sum_probs=49.0
Q ss_pred CCCCCCEEEccC-CcCCcc----CCccccCCCCCcEEeCCCCCCCCCC----chhhcCCCcceEEEecCCCCccc----C
Q 002186 123 NLTSLISLDISR-NNFSGH----FPGGIQSLRNLLVLDAFSNSFSGSV----PAEISQLEHLKVLNLAGSYFSGP----I 189 (955)
Q Consensus 123 ~l~~L~~L~Ls~-N~l~~~----~p~~~~~l~~L~~LdL~~N~l~~~~----p~~~~~L~~L~~L~Ls~n~l~~~----~ 189 (955)
+.++|++|+|++ +.++.. +-..+...++|++|+|++|.++... -..+...++|+.|++++|.+... +
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l 94 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 94 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHH
Confidence 345555555554 233211 1123344555555555555554221 12234455666666666655422 2
Q ss_pred CCCcCCCCCCcEEEcc--CCCCCC----CCchhccCCCCCcEEecccc
Q 002186 190 PSQFGSFKSLEFLHLA--GNLLND----QIPAELGMLKTVTHMEIGYN 231 (955)
Q Consensus 190 p~~~~~l~~L~~L~L~--~N~l~~----~~p~~l~~l~~L~~L~l~~n 231 (955)
...+...++|+.++|+ +|.+.. .+...+...++|++|+++++
T Consensus 95 ~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 95 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCS
T ss_pred HHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCC
Confidence 2344555666654443 344432 12223334445555554433
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.15 E-value=0.00032 Score=65.42 Aligned_cols=110 Identities=15% Similarity=0.080 Sum_probs=77.1
Q ss_pred CCCCcEEECCC-CcCccc----CCccccCCCCCCEEEccCCcCCcc----CCccccCCCCCcEEeCCCCCCCCC----Cc
Q 002186 100 FNELVDLNLSH-NSFSGQ----FPVEIFNLTSLISLDISRNNFSGH----FPGGIQSLRNLLVLDAFSNSFSGS----VP 166 (955)
Q Consensus 100 l~~L~~L~Ls~-n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~LdL~~N~l~~~----~p 166 (955)
-+.|+.|+|++ +.++.. +-..+...++|++|+|++|.+... +-..+...+.|+.|++++|.++.. +-
T Consensus 16 ~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~ 95 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 95 (166)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHH
Confidence 46789999987 456432 334456789999999999988643 223456778999999999988642 22
Q ss_pred hhhcCCCcceEEEec--CCCCcc----cCCCCcCCCCCCcEEEccCCCC
Q 002186 167 AEISQLEHLKVLNLA--GSYFSG----PIPSQFGSFKSLEFLHLAGNLL 209 (955)
Q Consensus 167 ~~~~~L~~L~~L~Ls--~n~l~~----~~p~~~~~l~~L~~L~L~~N~l 209 (955)
..+...++|+.++|+ +|.+.. .+...+...++|+.|+++.+..
T Consensus 96 ~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 96 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 456777889876664 566643 2344566788999999987643
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.45 E-value=0.026 Score=60.05 Aligned_cols=73 Identities=14% Similarity=0.040 Sum_probs=46.4
Q ss_pred hhhccCCCCCceEEEeCCCC--------cEEEEEEeecccchHHHHHHHHHHHhccCCCCce-eEeEEEEcCCeeEEEEe
Q 002186 696 CEEAARPQSAAGCKAVLPTG--------ITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~g--------~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~e 766 (955)
.+.++.|-.-.+|+...+++ +.|.+++.. +....-...+|.++++.+.-.+++ ++++++.+ .+|||
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e 121 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 121 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-CcchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEE
Confidence 34566777778999886543 456666654 222333456777777766534555 67777642 68999
Q ss_pred ecCCCCh
Q 002186 767 YLPNGNL 773 (955)
Q Consensus 767 y~~~gsL 773 (955)
|+++-.+
T Consensus 122 fi~g~~l 128 (395)
T d1nw1a_ 122 YIPSRPL 128 (395)
T ss_dssp CCCEEEC
T ss_pred EeccccC
Confidence 9987444
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=86.67 E-value=0.21 Score=50.74 Aligned_cols=30 Identities=27% Similarity=0.380 Sum_probs=26.5
Q ss_pred CCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 806 PAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 806 ~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
.++||+|+.+.||+++.+...-|.||+.+.
T Consensus 183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccccCCcchhhhhcccccceeEecccccc
Confidence 479999999999999988777899999763
|