Citrus Sinensis ID: 002217

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950--

MNTQHIHIQFLPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIEEQKQKQQVVKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSKELVDKTKERYWSPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDVDGSYISADSTDTLGEYEQESIPEEKVMKSGDFFVMKDNPNIRLIARAHKMSKSRGNVVNPDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVGSSLPDGTFKGGTVVNDEEPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKHPRKIIEPFILLLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKTRGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSIKKRIYVPGRILNVILDRQNIKASVR

cccccEEEEECccccccccccccccEEcccccccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccccccccccccEEEccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccEEcccccccccccccEEEccccccccccccccccEEECcccccHHHHHHHHHHHHcccccccccHHHHHHHHcccccccccEEEEEEccccccccccEEEEEcccccccccccEEEEccccHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHcccccccccccEEEcccccccccEEEEEEEEcccccccEEEccccccccHHHHHHccccEEEEEccccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccEECcccccccccccccccccccccHHHHHHHHcccccccccccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHcccccccccccccEEEEEcccccECcccccccccccccccccHHHcccccccEEEcccccEEEEccEEEccccccccccHHHHHHHHccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccccccHHHHcccEEEEEEEccEEEEEEEEcccccHHHHHHHHcccHHHHHHHcccccEEEEEEcccEEEEEEcccccccccc

*****IHIQFLPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIE**********RAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSKELVDKTKERYWSPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDVDGSYISADSTDTLGEYEQESIPEEKVMKSGDFFVMKDNPNIRLIARAHKMSKSRGNVVNPDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVGSSLPDG*******VNDEEPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKHPRKIIEPFILLLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKTRGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSIKKRIYVPGRILNVILDR********

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Leucine--tRNA ligase		probable	Q92AZ9
Leucine--tRNA ligase 1		probable	Q1MFI6
Leucine--tRNA ligase		probable	C0M8N3

Prediction of Enzyme Commission Number

EC Number	Description	Confidence Level
6.-.-.-	Ligases.	probable
6.1.-.-	1D-1-guanidino-3-amino-1,3-dideoxy-scyllo-inositol transaminase.	probable
6.1.1.-	Ligases forming aminoacyl-tRNA and related compounds.	probable
6.1.1.4	Leucine--tRNA ligase.	probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GAX, chain A
Confidence level:very confident
Coverage over the Query: 60-240,287-333,349,370-439,456-530,541-542,553-651,706-874
View the alignment between query and template
View the model in PyMOL

Template: 2V0C, chain A
Confidence level:very confident
Coverage over the Query: 63-879
View the alignment between query and template
View the model in PyMOL