Citrus Sinensis ID: 002217

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950--
MNTQHIHIQFLPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIEEQKQKQQVVKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSKELVDKTKERYWSPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDVDGSYISADSTDTLGEYEQESIPEEKVMKSGDFFVMKDNPNIRLIARAHKMSKSRGNVVNPDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVGSSLPDGTFKGGTVVNDEEPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKHPRKIIEPFILLLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKTRGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSIKKRIYVPGRILNVILDRQNIKASVR
cccccEEEEEEccccccccccccccEEcccccccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccccccccccccEEEccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccEEcccccccccccccEEEccccccccccccccccEEEEcccccHHHHHHHHHHHHcccccccccHHHHHHHHcccccccccEEEEEEccccccccccEEEEEcccccccccccEEEEccccHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHHcccccccccccEEEcccccccccEEEEEEEEcccccccEEEccccccccHHHHHHccccEEEEEccccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccHHHHHHHHHcccccccccccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHcccccccccccccEEEEEcccccEEcccccccccccccccccHHHHccccccEEEcccccEEEEccEEEccccccccccHHHHHHHHccHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccccccHHHHHccEEEEEEEccEEEEEEEEcccccHHHHHHHHcccHHHHHHHcccccEEEEEEcccEEEEEEcccccccccc
ccccEEEEEEcccccccccEEEcEEEEEcccccEEEEccccccEEEEEEccccccccHHHHHcccHHHHHHHHHHHHHHccccEcccccccccccEEEEEcccccccccccccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccHHccccccHHHHHHHHHHHHHHHcccEEEEEcEEcccccccEEEEccEEEccccccccccEEEccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccEEEEEEEEcccccccccEEEEEEcccccEEEEEEEEEccccHHHHHHccHcHHHHHHHHHHHHHcccHHHHHHHHccccccccccEEEccccccccEEEEEEEEEEcccccEEEEcccccHHHHHHHHHccccEEEEEEccccccccHHHHcccccEEEcccccccccccccccHHHHHHHHHHHHHHccccccEEEEEHHHHHHHHHHcccccccEEEEcccccEEEccHHcccEEcccccEEcccccccccHHHcHHHHccccccccccccccccccccHccccEEEEEEcccccccccccHHHHHccccccHEEcHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccEEEEEEEEccccccccEEcccccccccccccccEEEEccccccccEEEEccccccEEEEccccccccccccccHHHHHHHHcHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHccEEEEEEEEccEEEEEEEEcccccHHHHHHHHHccHHHHHHHcccEEEEEEEEcccEEEEEEccccEEEEcc
mntqhihiqflpqsfslqkqctsftvvkrpswfnscstsgaIVRCSVNEIEEQKQKQQVVKRaypfheiepkwqsywennrtfrtpdeidtskpkfyvldmfpypsgaglhvghplgyTATDILARLKRMqgynvlhpmgwdafglpaeqyaietgthpkittLRNINRFRTQLKSLGfsydwnreistiepayyKWTQWIFLQLLKRGLAyqaevpvnwcpalgtvlaneevvdgvsergghpvirkpMRQWMLKITEYADRLLddlddldwpeSVKEMQRNWigrsegaemdfrvldsdgqerdikitvyttrpdtifGATYLvvapehpllsSLVSTTQSQNIEEYKNLasrksdlertelqkektgvfsgcyarnpasgeaiPIWVADYVlgsygtgaimavpahdtrdheFALKFDISIhsvvmpddesssqsekaytgeglivnssnlisgldinglscQEATSKVIEWAEKtgngkkkvnYKLRDWLFARQRywgepipvvfldgtgetvplheaelpltlpelddftptgtgepplskaVSWVQttehssgkparretstmpqwagsCWYYlrfmdpknskeLVDKtkerywspvdvyvgGAEHAVLHLLYARFWHKVLYDIgvvstkepfkcvinqgiilgEMQYMVCKdvdgsyisadstdtlgeyeqesipeekvmksgdffvmkdnpnIRLIARAHKMsksrgnvvnpddvvteygADSLRLYEMFmgpfrdsktwntsgiegVHRFLGRMWRLivgsslpdgtfkggtvvndeeptlEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYkwekhprkiIEPFILLlapyaphmsEELWFRLghsnslayesfpkanpdylkdstivlpiqingktrgtiqveegcseEEAFKLASLDEKLSKFldgksikkriyvpgrILNVILDRqnikasvr
mntqhihiqflpqsfslqKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIEEQKQKQQVVKRAYPFheiepkwqsywennrtfrtpdeidtskPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGthpkittlrnINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDgvsergghpvirkpmrqWMLKITEYADRLLDDLDDLDWPESVKEMqrnwigrsegaemdfrvldsdgqerdIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYknlasrksdlertelqkektgvfsgcyarnpasGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEwaektgngkkkvnyKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSWVQTtehssgkparretstmpqWAGSCWYYLRFMDPKNSKELVDKTKERYWSPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDVDGSYISADSTDTLGEYEqesipeekvmksgdFFVMKDNPNIRLIARAHkmsksrgnvvnpddvVTEYGADSLRLYEMFMGPfrdsktwntSGIEGVHRFLGRMWRLIVGSSLPDGTFKGGTVVNDEEPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKHPRKIIEPFILLLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKTRGTIQVEEGCSEEEAFKLASLDEKLSkfldgksikkriyvpgrilnvildrqnikasvr
MNTQHIHIQFLPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIEEqkqkqqvvkRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYAdrllddlddldWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPllsslvsttqsqNIEEYKNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSKELVDKTKERYWSPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDVDGSYISADSTDTLGEYEQESIPEEKVMKSGDFFVMKDNPNIRLIARAHKMSKSRGNVVNPDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVGSSLPDGTFKGGTVVNDEEPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKHPRKIIEPFILLLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKTRGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSIKKRIYVPGRILNVILDRQNIKASVR
*****IHIQFLPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIEE***KQQVVKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSL********************************GVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVV**************TGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLP*****************************************QWAGSCWYYLRFMDPKNSKELVDKTKERYWSPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDVDGSYISA***********************DFFVMKDNPNIRLIARA********NVVNPDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVGSSLPDGTFKGGTVVNDEEPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKHPRKIIEPFILLLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKTRGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSIKKRIYVPGRILNVILDR********
*********FLPQSFSLQK************************************************EIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSKELVDKTKERYWSPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDVDGSYISADSTDTLGEYEQESIPEEKVMKSGDFFVMKDNPNIRLIARAHKMSKSRGNVVNPDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVGSSLPDG***********EPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKHPRKIIEPFILLLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKTRGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSIKKRIYVPGRILNVILDR********
MNTQHIHIQFLPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIE**********RAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVV*************YTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPL*************************PQWAGSCWYYLRFMDPKNSKELVDKTKERYWSPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDVDGSYISADSTDTLGEYEQESIPEEKVMKSGDFFVMKDNPNIRLIARAHKMSKSRGNVVNPDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVGSSLPDGTFKGGTVVNDEEPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKHPRKIIEPFILLLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKTRGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSIKKRIYVPGRILNVILDRQNIKASVR
*NTQHIHIQFLPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIEEQKQKQQVVKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSKELVDKTKERYWSPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDVDGSYISADSTDTLGEYEQESIPEEKVMKSGDFFVMKDNPNIRLIARAHKMSKSRGNVVNPDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVGSSLP*********VNDEEPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKHPRKIIEPFILLLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKTRGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSIKKRIYVPGRILNVILDRQNIKAS*R
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNTQHIHIQFLPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIEEQKQKQQVVKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSKELVDKTKERYWSPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDVDGSYISADSTDTLGEYEQESIPEEKVMKSGDFFVMKDNPNIRLIARAHKMSKSRGNVVNPDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVGSSLPDGTFKGGTVVNDEEPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKHPRKIIEPFILLLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKTRGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSIKKRIYVPGRILNVILDRQNIKASVR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query952 2.2.26 [Sep-21-2011]
Q2S415863 Leucine--tRNA ligase OS=S yes no 0.903 0.996 0.591 0.0
B7GK53805 Leucine--tRNA ligase OS=A yes no 0.843 0.997 0.562 0.0
A4IRY3805 Leucine--tRNA ligase OS=G yes no 0.843 0.997 0.561 0.0
C5D6D7805 Leucine--tRNA ligase OS=G yes no 0.843 0.997 0.564 0.0
Q9K7S8806 Leucine--tRNA ligase OS=B yes no 0.843 0.996 0.551 0.0
B1HXY7805 Leucine--tRNA ligase OS=L yes no 0.843 0.997 0.542 0.0
A7GU19802 Leucine--tRNA ligase OS=B yes no 0.840 0.997 0.546 0.0
Q5KW09805 Leucine--tRNA ligase OS=G yes no 0.841 0.995 0.554 0.0
C0ZB13805 Leucine--tRNA ligase OS=B yes no 0.841 0.995 0.542 0.0
Q816T0802 Leucine--tRNA ligase OS=B yes no 0.840 0.997 0.548 0.0
>sp|Q2S415|SYL_SALRD Leucine--tRNA ligase OS=Salinibacter ruber (strain DSM 13855 / M31) GN=leuS PE=3 SV=1 Back     alignment and function desciption
 Score = 1093 bits (2828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/879 (59%), Positives = 659/879 (74%), Gaps = 19/879 (2%)

Query: 63  AYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATD 122
           AYPFH+IE KWQ YWE ++TFRTPDE+   + +FYVLDMFPYPSG+GLHVGHP GYTATD
Sbjct: 2   AYPFHDIETKWQQYWEEHQTFRTPDEVPDDQEEFYVLDMFPYPSGSGLHVGHPEGYTATD 61

Query: 123 ILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYD 182
           I+AR KR QG+NVLHPMGWDAFGLPAEQYA++T THP+ TT +NI +F+ QLK LGFSYD
Sbjct: 62  IVARYKRKQGFNVLHPMGWDAFGLPAEQYALKTNTHPRETTEKNIAQFKRQLKRLGFSYD 121

Query: 183 WNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGG 242
           W REI+T +P YYKWTQWIFLQL ++GLAYQ+E PV WC  LGTVLANEEV+DG SERGG
Sbjct: 122 WQREINTTDPDYYKWTQWIFLQLYEKGLAYQSEEPVWWCEELGTVLANEEVIDGKSERGG 181

Query: 243 HPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDG 302
           +P  R PMRQW+LKITEYADRLL+ L+DLDWPES KEMQRNWIGRSEGA + F ++ +D 
Sbjct: 182 YPCERVPMRQWVLKITEYADRLLEGLEDLDWPESTKEMQRNWIGRSEGANVYFDLVGADD 241

Query: 303 QERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERT 362
                 + VYTTRPDT+FGATY+V+APEH LL  + +    ++++EY   A RKS+ +R 
Sbjct: 242 -----ALEVYTTRPDTLFGATYMVLAPEHELLDEITTDEHREDVDEYCRQALRKSERKRQ 296

Query: 363 ELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDI 422
           + Q +KTGVF+G YA NP +GE IPIWVADYVL SYGTGAIMAVPAHD RDH FA K+D+
Sbjct: 297 Q-QGDKTGVFTGGYAVNPVNGEEIPIWVADYVLVSYGTGAIMAVPAHDERDHAFANKYDL 355

Query: 423 SIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNG 482
            I  VV    E     E+AYTG+G  V+S+N    + +NGL  +EA   + EW ++   G
Sbjct: 356 PIREVV----EGGDIDEEAYTGDGPHVHSAN--EAVSLNGLRNEEAKEAITEWLDEEEKG 409

Query: 483 KKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEP 542
           ++ VNY+L+DWLF+RQRYWGEP P+VF +  GE  P+ E ELP+TLP+LD F P+GT E 
Sbjct: 410 ERTVNYQLQDWLFSRQRYWGEPFPIVFTE-DGEDKPVPEEELPVTLPDLDVFEPSGTPEG 468

Query: 543 PLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSKELVDKTKERYWSP 602
           PL+    W +TT+  +G+PA+RET+TMPQWAGSCWYYLRF+DP N ++LVD  KE YW P
Sbjct: 469 PLATIEDWRETTDPETGEPAQRETNTMPQWAGSCWYYLRFIDPDNDEQLVDPEKEEYWMP 528

Query: 603 VDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDVDG 662
           VD+YVGG+EHAVLHLLYARFWHKVLYD GVVSTKEPF+ +++QG+ILGE +Y   +D  G
Sbjct: 529 VDLYVGGSEHAVLHLLYARFWHKVLYDAGVVSTKEPFQTLVHQGMILGETEYTAYRDDAG 588

Query: 663 SYISADSTDTLGEYEQESIPEEKVMKSGDFFVMKDNPNIRLIARAHKMSKSRGNVVNPDD 722
            ++SA+  D   +     + +  V K GD FV+ D P +R+ AR+HKMSKSRGNV+NPDD
Sbjct: 589 EFVSAEQVDDDADLTPVPVDDGDVKKDGDVFVLADRPAVRVDARSHKMSKSRGNVINPDD 648

Query: 723 VVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVGSSLPDGTFKGGTV 782
           VV EYGAD+LRLYEMFMGP    K W+T  +EGVHRFL R+WRL+V +        GG  
Sbjct: 649 VVDEYGADTLRLYEMFMGPLEQDKPWSTDDMEGVHRFLNRIWRLVVDAD------SGGLA 702

Query: 783 VNDEEPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKHPRKIIEPFIL 842
           V+DEEP  EQL TLH+ I  VTE+IE   FNT I+AMMEF+NAA KW+  PR++  PF+L
Sbjct: 703 VSDEEPDREQLRTLHRTIKTVTEDIEARDFNTAIAAMMEFVNAANKWDALPRQVATPFVL 762

Query: 843 LLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKTRGTIQVEEG 902
           LL+P+APH++EELW RLGH  SLAY  +P  + + ++   + +P+Q++G  R TI+V   
Sbjct: 763 LLSPFAPHLAEELWARLGHDQSLAYADWPAYDDELIRREVVEMPVQVDGTVRATIEVAAD 822

Query: 903 CSEEEAFKLASLDEKLSKFLDGKSIKKRIYVPGRILNVI 941
             E +    A   E +++ LD + +++ IYVPG+I+N +
Sbjct: 823 AEEADVLATAKEAENVARHLDDEDLQREIYVPGQIVNFV 861

Salinibacter ruber (strain DSM 13855 / M31) (taxid: 309807)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 4
>sp|B7GK53|SYL_ANOFW Leucine--tRNA ligase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=leuS PE=3 SV=1 Back     alignment and function description
>sp|A4IRY3|SYL_GEOTN Leucine--tRNA ligase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=leuS PE=3 SV=2 Back     alignment and function description
>sp|C5D6D7|SYL_GEOSW Leucine--tRNA ligase OS=Geobacillus sp. (strain WCH70) GN=leuS PE=3 SV=1 Back     alignment and function description
>sp|Q9K7S8|SYL_BACHD Leucine--tRNA ligase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=leuS PE=3 SV=1 Back     alignment and function description
>sp|B1HXY7|SYL_LYSSC Leucine--tRNA ligase OS=Lysinibacillus sphaericus (strain C3-41) GN=leuS PE=3 SV=1 Back     alignment and function description
>sp|A7GU19|SYL_BACCN Leucine--tRNA ligase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=leuS PE=3 SV=1 Back     alignment and function description
>sp|Q5KW09|SYL_GEOKA Leucine--tRNA ligase OS=Geobacillus kaustophilus (strain HTA426) GN=leuS PE=3 SV=1 Back     alignment and function description
>sp|C0ZB13|SYL_BREBN Leucine--tRNA ligase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=leuS PE=3 SV=1 Back     alignment and function description
>sp|Q816T0|SYL_BACCR Leucine--tRNA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=leuS PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query952
224115854974 predicted protein [Populus trichocarpa] 0.991 0.969 0.818 0.0
225444321971 PREDICTED: leucyl-tRNA synthetase [Vitis 0.996 0.977 0.798 0.0
255554793960 leucyl-tRNA synthetase, putative [Ricinu 0.993 0.985 0.807 0.0
147773742893 hypothetical protein VITISV_036142 [Viti 0.938 1.0 0.847 0.0
356522021972 PREDICTED: leucyl-tRNA synthetase-like [ 0.947 0.927 0.835 0.0
449434392978 PREDICTED: leucine--tRNA ligase-like [Cu 0.956 0.931 0.815 0.0
449479692 1059 PREDICTED: leucine--tRNA ligase-like [Cu 0.956 0.860 0.815 0.0
15233478973 leucyl-tRNA synthetase [Arabidopsis thal 0.955 0.935 0.785 0.0
297809613972 EMB2369 [Arabidopsis lyrata subsp. lyrat 0.997 0.977 0.753 0.0
3574979391009 Leucyl-tRNA synthetase [Medicago truncat 1.0 0.943 0.744 0.0
>gi|224115854|ref|XP_002317141.1| predicted protein [Populus trichocarpa] gi|222860206|gb|EEE97753.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1586 bits (4107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 789/964 (81%), Positives = 858/964 (89%), Gaps = 20/964 (2%)

Query: 9   QFLPQSFSLQKQCTSFTV-------VKRPSWFNSCSTSGAI-----------VRCSVNEI 50
           QFLP S   Q++   FT         K+  +F++ +   +            +RCSV+E+
Sbjct: 11  QFLPLSPFYQQRFHLFTQKPQSLKPTKKSCYFSTTACDNSFKGGLFRVQKGRIRCSVSEV 70

Query: 51  EEQKQKQ-QVVKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAG 109
           EEQK+KQ QVVKRAYPFHEIEPKWQSYWE N+TFRTPDE+DTSKPKFYVLDMFPYPSGAG
Sbjct: 71  EEQKEKQLQVVKRAYPFHEIEPKWQSYWEKNQTFRTPDEVDTSKPKFYVLDMFPYPSGAG 130

Query: 110 LHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINR 169
           LHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINR
Sbjct: 131 LHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINR 190

Query: 170 FRT-QLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVL 228
           F + QLKSLG SYDW+REIST EP YYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVL
Sbjct: 191 FLSLQLKSLGLSYDWDREISTTEPQYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVL 250

Query: 229 ANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRS 288
           ANEEVVDGVSERGGHPVIRKPMRQWMLKIT YADRLL+DLDDLDWPESVKEMQRNWIGRS
Sbjct: 251 ANEEVVDGVSERGGHPVIRKPMRQWMLKITAYADRLLEDLDDLDWPESVKEMQRNWIGRS 310

Query: 289 EGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEE 348
           EGAE++F VLD DG+ERDIKITVYTTRPDT+FGATYLVVAPEH LL SL+S +Q +++EE
Sbjct: 311 EGAELEFCVLDGDGKERDIKITVYTTRPDTVFGATYLVVAPEHSLLPSLMSLSQRESVEE 370

Query: 349 YKNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPA 408
           YK+LASRKSDLERTELQKEKTGVFSGCYA+NPA+GEAIPIWVADYVLGSYGTGAIMAVPA
Sbjct: 371 YKDLASRKSDLERTELQKEKTGVFSGCYAQNPANGEAIPIWVADYVLGSYGTGAIMAVPA 430

Query: 409 HDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEA 468
           HDTRD+EFA K+DI I  VV PDD+  S S KAY  EG I+NSS+  SGLDINGL  + A
Sbjct: 431 HDTRDYEFATKYDIPIRWVVKPDDDDFSDSGKAYEREGSILNSSSSTSGLDINGLHSKVA 490

Query: 469 TSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTL 528
            SKVIEWA+ TGNGKKKVNYKLRDWLFARQRYWGEPIPVVFL  TGET P+ E +LPLTL
Sbjct: 491 ASKVIEWADTTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLQDTGETAPILETDLPLTL 550

Query: 529 PELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNS 588
           PELDDFTPTGTGEPPL+KAVSWV+TT+ SSGKPA RETSTMPQWAGSCWYYLR+MDPKNS
Sbjct: 551 PELDDFTPTGTGEPPLAKAVSWVKTTDPSSGKPAMRETSTMPQWAGSCWYYLRYMDPKNS 610

Query: 589 KELVDKTKERYWSPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGII 648
           KELVDKTKE+YWSP+DVYVGGAEHAVLHLLY+RFWHKVLYDIGVVSTKEPFKCVINQGII
Sbjct: 611 KELVDKTKEKYWSPIDVYVGGAEHAVLHLLYSRFWHKVLYDIGVVSTKEPFKCVINQGII 670

Query: 649 LGEMQYMVCKDVDGSYISADSTDTLGEYEQESIPEEKVMKSGDFFVMKDNPNIRLIARAH 708
           LGE+QY   K+ DG+Y+SADS D  GE  QE IPEEKV+KSGD FV+K +P+IRLIARAH
Sbjct: 671 LGEVQYTAFKNPDGNYVSADSADLSGEINQEIIPEEKVIKSGDSFVLKGDPSIRLIARAH 730

Query: 709 KMSKSRGNVVNPDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIV 768
           KMSKSRGNVVNPDDVV+EYGADSLRLYEMFMGPFRDSKTW+TSGIEGV+RFLGR WRLIV
Sbjct: 731 KMSKSRGNVVNPDDVVSEYGADSLRLYEMFMGPFRDSKTWSTSGIEGVYRFLGRTWRLIV 790

Query: 769 GSSLPDGTFKGGTVVNDEEPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYK 828
           GS LPDGTF+ GTV  D EP+ EQL TLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYK
Sbjct: 791 GSPLPDGTFRDGTVAIDGEPSFEQLRTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYK 850

Query: 829 WEKHPRKIIEPFILLLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQ 888
           W+K PR II+ F+ LL+PYAPHM+EELWFRLGHSNSLAYE FPKANPDYLK+STIVLP+Q
Sbjct: 851 WDKLPRSIIKEFVFLLSPYAPHMAEELWFRLGHSNSLAYEPFPKANPDYLKESTIVLPVQ 910

Query: 889 INGKTRGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSIKKRIYVPGRILNVILDRQNIK 948
           INGK RGTIQ+EEGCSEE+AF+L S D KLSKFLDGKSIKKRIYVPG+ILNVIL  QNIK
Sbjct: 911 INGKMRGTIQIEEGCSEEDAFRLVSQDAKLSKFLDGKSIKKRIYVPGKILNVILGPQNIK 970

Query: 949 ASVR 952
           A VR
Sbjct: 971 AGVR 974

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225444321|ref|XP_002264138.1| PREDICTED: leucyl-tRNA synthetase [Vitis vinifera] gi|302144097|emb|CBI23202.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255554793|ref|XP_002518434.1| leucyl-tRNA synthetase, putative [Ricinus communis] gi|223542279|gb|EEF43821.1| leucyl-tRNA synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147773742|emb|CAN74190.1| hypothetical protein VITISV_036142 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356522021|ref|XP_003529648.1| PREDICTED: leucyl-tRNA synthetase-like [Glycine max] Back     alignment and taxonomy information
>gi|449434392|ref|XP_004134980.1| PREDICTED: leucine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449479692|ref|XP_004155678.1| PREDICTED: leucine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15233478|ref|NP_192344.1| leucyl-tRNA synthetase [Arabidopsis thaliana] gi|4982478|gb|AAD36946.1|AF069441_6 putative leucyl tRNA synthetase [Arabidopsis thaliana] gi|7267192|emb|CAB77903.1| putative leucyl tRNA synthetase [Arabidopsis thaliana] gi|19310531|gb|AAL84999.1| AT4g04350/T19B17_7 [Arabidopsis thaliana] gi|25090241|gb|AAN72260.1| At4g04350/T19B17_7 [Arabidopsis thaliana] gi|332656983|gb|AEE82383.1| leucyl-tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297809613|ref|XP_002872690.1| EMB2369 [Arabidopsis lyrata subsp. lyrata] gi|297318527|gb|EFH48949.1| EMB2369 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357497939|ref|XP_003619258.1| Leucyl-tRNA synthetase [Medicago truncatula] gi|355494273|gb|AES75476.1| Leucyl-tRNA synthetase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query952
TAIR|locus:2134887973 EMB2369 "EMBRYO DEFECTIVE 2369 0.948 0.928 0.777 0.0
TIGR_CMR|BA_4991802 BA_4991 "leucyl-tRNA synthetas 0.626 0.743 0.618 2.3e-260
TIGR_CMR|CHY_0393821 CHY_0393 "leucyl-tRNA syntheta 0.597 0.693 0.500 1.7e-191
TIGR_CMR|DET_0194813 DET_0194 "leucyl-tRNA syntheta 0.618 0.724 0.457 2.5e-188
UNIPROTKB|P67510969 leuS "Leucine--tRNA ligase" [M 0.738 0.725 0.429 1.4e-187
TIGR_CMR|GSU_2209824 GSU_2209 "leucyl-tRNA syntheta 0.680 0.786 0.423 2.9e-185
TIGR_CMR|CBU_0559820 CBU_0559 "leucyl-tRNA syntheta 0.588 0.682 0.452 4.8e-170
POMBASE|SPAC4G8.09874 SPAC4G8.09 "mitochondrial leuc 0.350 0.382 0.451 1.4e-150
TIGR_CMR|SPO_3432852 SPO_3432 "leucyl-tRNA syntheta 0.596 0.666 0.413 3.2e-149
TIGR_CMR|NSE_0506831 NSE_0506 "leucyl-tRNA syntheta 0.639 0.732 0.390 2.8e-135
TAIR|locus:2134887 EMB2369 "EMBRYO DEFECTIVE 2369" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3847 (1359.3 bits), Expect = 0., P = 0.
 Identities = 702/903 (77%), Positives = 789/903 (87%)

Query:    50 IEEXXXXXXXXXRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAG 109
             + E         R YPFHEIEPKWQ YWE+NR FRTPD++DTSKPKFYVLDMFPYPSGAG
Sbjct:    71 VSETATTSIELKRVYPFHEIEPKWQRYWEDNRIFRTPDDVDTSKPKFYVLDMFPYPSGAG 130

Query:   110 LHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINR 169
             LHVGHPLGYTATDILARL+RMQGYNVLHPMGWDAFGLPAEQYAIETGTHPK TTL+NI+R
Sbjct:   131 LHVGHPLGYTATDILARLRRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKTTTLKNIDR 190

Query:   170 FRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLA 229
             FR QLKSLGFSYDW+RE+ST EP YYKWTQWIFLQL K+GLAYQAEVPVNWCPALGTVLA
Sbjct:   191 FRLQLKSLGFSYDWDRELSTTEPDYYKWTQWIFLQLYKKGLAYQAEVPVNWCPALGTVLA 250

Query:   230 NEEVVDGVSERGGHPVIRKPMRQWMLKITEYAXXXXXXXXXXXWPESVKEMQRNWIGRSE 289
             NEEVVDGVSERGGHPVIRKPMRQWMLKIT YA           WPES+KEMQRNWIGRSE
Sbjct:   251 NEEVVDGVSERGGHPVIRKPMRQWMLKITAYADRLLEDLDELEWPESIKEMQRNWIGRSE 310

Query:   290 GAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPXXXXXXXXXXXXNIEEY 349
             GAE++F +LD +G+E D +ITVYTTRPDT+FGATY+VVAPEH              +EEY
Sbjct:   311 GAELNFSILDGEGRETDKEITVYTTRPDTLFGATYMVVAPEHQLLSYFVTAEQKQQVEEY 370

Query:   350 KNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAH 409
             K+ ASRKSDLERTELQK+KTGVF+GCYA+NPA+G+AIPIWVADYVL SYGTGAIMAVPAH
Sbjct:   371 KDFASRKSDLERTELQKDKTGVFTGCYAKNPANGDAIPIWVADYVLASYGTGAIMAVPAH 430

Query:   410 DTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEAT 469
             DTRD+EFALK++I I  VV  +  SS  +++ Y G G+I NSS L +GLDIN LS +EA 
Sbjct:   431 DTRDNEFALKYNIPIKWVVRNEANSSDDAKQVYPGLGIIENSSTLETGLDINQLSSKEAA 490

Query:   470 SKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLP 529
              KVIEWAE+TGNGKKKVNYKLRDWLFARQRYWGEPIP++ LD +GET+ + E+ELPLTLP
Sbjct:   491 LKVIEWAERTGNGKKKVNYKLRDWLFARQRYWGEPIPILILDESGETIAISESELPLTLP 550

Query:   530 ELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSK 589
             EL+DFTPTGTGEPPLSKAVSWV T + S+GKPA+RETSTMPQWAGSCWYYLRFMDPKN +
Sbjct:   551 ELNDFTPTGTGEPPLSKAVSWVNTVDPSTGKPAKRETSTMPQWAGSCWYYLRFMDPKNPE 610

Query:   590 ELVDKTKERYWSPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIIL 649
              LVDK KE+YWSPVDVYVGGAEHAVLHLLY+RFWHKVLYDIGVVSTKEPFKCVINQGIIL
Sbjct:   611 ALVDKEKEKYWSPVDVYVGGAEHAVLHLLYSRFWHKVLYDIGVVSTKEPFKCVINQGIIL 670

Query:   650 GEMQYMVCKDVDGSYISADSTDTLGEYEQESIPEEKVMKSGDFFVMKDNPNIRLIARAHK 709
             GE+QY   KD +G+Y+SAD+ + L E++Q +IPEEKV+KSGD FV+K++P+IRLI R +K
Sbjct:   671 GEVQYTAWKDQEGNYVSADTEERLNEHQQVTIPEEKVIKSGDHFVLKEDPSIRLIPRVYK 730

Query:   710 MSKSRGNVVNPDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVG 769
             MSKSRGNVVNPDDVV EYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFL R WRL++G
Sbjct:   731 MSKSRGNVVNPDDVVLEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLARTWRLVIG 790

Query:   770 SSLPDGTFKGGTVVNDEEPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKW 829
                 DG+FK GT+V D+EPTLEQL TLHKCIAKVTEEIE TRFNTGIS MMEF+NAAYKW
Sbjct:   791 LPQSDGSFKDGTLVTDDEPTLEQLRTLHKCIAKVTEEIESTRFNTGISGMMEFVNAAYKW 850

Query:   830 EKHPRKIIEPFILLLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQI 889
                PR IIEPF+LLL+PYAPHM+EELW RLGH NSLAYESFPKANPDYLK++TIVLP+QI
Sbjct:   851 NNQPRGIIEPFVLLLSPYAPHMAEELWSRLGHPNSLAYESFPKANPDYLKNTTIVLPVQI 910

Query:   890 NGKTRGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSIKKRIYVPGRILNVILDRQNIKA 949
             NGKTRGTI+VEEGCSE++AF LAS D+KL K+LDG+SIKKRIYVPG+ILNVILDR N+K 
Sbjct:   911 NGKTRGTIEVEEGCSEDDAFVLASQDDKLRKYLDGQSIKKRIYVPGKILNVILDRTNVKV 970

Query:   950 SVR 952
             + +
Sbjct:   971 TTK 973
GO:0000166 "nucleotide binding" evidence=IEA
GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA;ISS
GO:0004823 "leucine-tRNA ligase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA;ISS
GO:0006429 "leucyl-tRNA aminoacylation" evidence=IEA
GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;IMP;NAS
GO:0009507 "chloroplast" evidence=IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0006364 "rRNA processing" evidence=RCA
GO:0006399 "tRNA metabolic process" evidence=RCA
GO:0009658 "chloroplast organization" evidence=RCA
GO:0010027 "thylakoid membrane organization" evidence=RCA
GO:0010103 "stomatal complex morphogenesis" evidence=RCA
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA
GO:0016226 "iron-sulfur cluster assembly" evidence=RCA
GO:0016556 "mRNA modification" evidence=RCA
GO:0048481 "ovule development" evidence=RCA
TIGR_CMR|BA_4991 BA_4991 "leucyl-tRNA synthetase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0393 CHY_0393 "leucyl-tRNA synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0194 DET_0194 "leucyl-tRNA synthetase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
UNIPROTKB|P67510 leuS "Leucine--tRNA ligase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2209 GSU_2209 "leucyl-tRNA synthetase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0559 CBU_0559 "leucyl-tRNA synthetase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
POMBASE|SPAC4G8.09 SPAC4G8.09 "mitochondrial leucine-tRNA ligase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_3432 SPO_3432 "leucyl-tRNA synthetase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|NSE_0506 NSE_0506 "leucyl-tRNA synthetase" [Neorickettsia sennetsu str. Miyayama (taxid:222891)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q92AZ9SYL_LISIN6, ., 1, ., 1, ., 40.53530.83710.9925yesno
A9VLA2SYL_BACWK6, ., 1, ., 1, ., 40.54420.84030.9975yesno
Q1MFI6SYL1_RHIL36, ., 1, ., 1, ., 40.53470.87070.9892yesno
C0M8N3SYL_STRE46, ., 1, ., 1, ., 40.52830.86760.9915yesno
B4U0A1SYL_STREM6, ., 1, ., 1, ., 40.52600.86760.9915yesno
Q8DS85SYL_STRMU6, ., 1, ., 1, ., 40.53170.86760.9915yesno
B7HSS7SYL_BACC76, ., 1, ., 1, ., 40.54870.84030.9975yesno
Q5KW09SYL_GEOKA6, ., 1, ., 1, ., 40.55450.84130.9950yesno
Q837N5SYL_ENTFA6, ., 1, ., 1, ., 40.53560.84130.9962yesno
A8FGG0SYL_BACP26, ., 1, ., 1, ., 40.54200.84030.9950yesno
C1CB31SYL_STRP76, ., 1, ., 1, ., 40.52600.86760.9915yesno
B9J1E1SYL_BACCQ6, ., 1, ., 1, ., 40.54870.84030.9975yesno
Q81KK6SYL_BACAN6, ., 1, ., 1, ., 40.54760.84030.9975yesno
Q9K7S8SYL_BACHD6, ., 1, ., 1, ., 40.55150.84340.9962yesno
B5E6T0SYL_STRP46, ., 1, ., 1, ., 40.52830.86760.9915yesno
Q816T0SYL_BACCR6, ., 1, ., 1, ., 40.54870.84030.9975yesno
Q5HNF1SYL_STAEQ6, ., 1, ., 1, ., 40.52670.83920.9937yesno
Q5M1L6SYL_STRT16, ., 1, ., 1, ., 40.52830.86760.9915yesno
Q4L7A3SYL_STAHJ6, ., 1, ., 1, ., 40.53060.84030.9950yesno
Q5M657SYL_STRT26, ., 1, ., 1, ., 40.52830.86760.9915yesno
Q72YY8SYL_BACC16, ., 1, ., 1, ., 40.54870.84030.9975yesno
C3LAX2SYL_BACAC6, ., 1, ., 1, ., 40.54760.84030.9975yesno
Q97SS0SYL_STRPN6, ., 1, ., 1, ., 40.52600.86760.9915yesno
Q632V2SYL_BACCZ6, ., 1, ., 1, ., 40.54760.84030.9975yesno
B7H798SYL_BACC46, ., 1, ., 1, ., 40.54760.84030.9975yesno
B1HXY7SYL_LYSSC6, ., 1, ., 1, ., 40.54200.84340.9975yesno
A0RJX2SYL_BACAH6, ., 1, ., 1, ., 40.54760.84030.9975yesno
Q2S415SYL_SALRD6, ., 1, ., 1, ., 40.59150.90330.9965yesno
B7GK53SYL_ANOFW6, ., 1, ., 1, ., 40.56230.84340.9975yesno
A7GU19SYL_BACCN6, ., 1, ., 1, ., 40.54640.84030.9975yesno
P36430SYL_BACSU6, ., 1, ., 1, ., 40.54640.84240.9975yesno
B7IL05SYL_BACC26, ., 1, ., 1, ., 40.54530.84030.9975yesno
C5D6D7SYL_GEOSW6, ., 1, ., 1, ., 40.56460.84340.9975yesno
Q8CNU8SYL_STAES6, ., 1, ., 1, ., 40.52670.83920.9937yesno
Q49YI8SYL_STAS16, ., 1, ., 1, ., 40.52900.83920.9937yesno
A7Z7V7SYL_BACA26, ., 1, ., 1, ., 40.54530.84240.9975yesno
Q03MJ2SYL_STRTD6, ., 1, ., 1, ., 40.52830.86760.9915yesno
Q65FX8SYL_BACLD6, ., 1, ., 1, ., 40.54300.84240.9975yesno
C3PBK0SYL_BACAA6, ., 1, ., 1, ., 40.54760.84030.9975yesno
Q6HCE2SYL_BACHK6, ., 1, ., 1, ., 40.54760.84030.9975yesno
A4IRY3SYL_GEOTN6, ., 1, ., 1, ., 40.56120.84340.9975yesno
C1CID7SYL_STRZP6, ., 1, ., 1, ., 40.52600.86760.9915yesno
C0MET9SYL_STRS76, ., 1, ., 1, ., 40.53060.86760.9915N/Ano
B1YKH4SYL_EXIS26, ., 1, ., 1, ., 40.53520.83500.9925yesno
C0ZB13SYL_BREBN6, ., 1, ., 1, ., 40.54200.84130.9950yesno
B7JT07SYL_BACC06, ., 1, ., 1, ., 40.54760.84030.9975yesno
B1I8Y2SYL_STRPI6, ., 1, ., 1, ., 40.52830.86760.9915yesno
Q73K81SYL_TREDE6, ., 1, ., 1, ., 40.54440.88970.9871yesno
Q8EP12SYL_OCEIH6, ., 1, ., 1, ., 40.54310.84030.9950yesno
C1EW09SYL_BACC36, ., 1, ., 1, ., 40.54760.84030.9975yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.40.946
3rd Layer6.1.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query952
PLN02563963 PLN02563, PLN02563, aminoacyl-tRNA ligase 0.0
TIGR00396842 TIGR00396, leuS_bact, leucyl-tRNA synthetase, euba 0.0
PRK00390805 PRK00390, leuS, leucyl-tRNA synthetase; Validated 0.0
COG0495814 COG0495, LeuS, Leucyl-tRNA synthetase [Translation 0.0
PRK00390805 PRK00390, leuS, leucyl-tRNA synthetase; Validated 7e-98
cd00812314 cd00812, LeuRS_core, catalytic core domain of leuc 2e-84
COG0525877 COG0525, ValS, Valyl-tRNA synthetase [Translation, 3e-81
pfam13603178 pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase, 3e-73
TIGR00422861 TIGR00422, valS, valyl-tRNA synthetase 7e-72
TIGR00392861 TIGR00392, ileS, isoleucyl-tRNA synthetase 4e-49
COG0060933 COG0060, IleS, Isoleucyl-tRNA synthetase [Translat 6e-47
PRK13208800 PRK13208, valS, valyl-tRNA synthetase; Reviewed 1e-45
pfam00133606 pfam00133, tRNA-synt_1, tRNA synthetases class I ( 3e-44
cd00817382 cd00817, ValRS_core, catalytic core domain of valy 2e-43
cd07958117 cd07958, Anticodon_Ia_Leu_BEm, Anticodon-binding d 3e-42
cd00812314 cd00812, LeuRS_core, catalytic core domain of leuc 2e-40
cd00668312 cd00668, Ile_Leu_Val_MetRS_core, catalytic core do 7e-33
TIGR00395938 TIGR00395, leuS_arch, leucyl-tRNA synthetase, arch 3e-31
PRK14900 1052 PRK14900, valS, valyl-tRNA synthetase; Provisional 3e-26
cd00814319 cd00814, MetRS_core, catalytic core domain of meth 5e-26
PTZ00419 995 PTZ00419, PTZ00419, valyl-tRNA synthetase-like pro 2e-25
COG0143558 COG0143, MetG, Methionyl-tRNA synthetase [Translat 6e-25
PRK05729874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 1e-23
cd00818338 cd00818, IleRS_core, catalytic core domain of isol 2e-23
pfam09334388 pfam09334, tRNA-synt_1g, tRNA synthetases class I 3e-23
PRK12300897 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed 8e-23
PRK06039975 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe 4e-22
PLN02843 974 PLN02843, PLN02843, isoleucyl-tRNA synthetase 3e-21
PRK11893511 PRK11893, PRK11893, methionyl-tRNA synthetase; Rev 7e-20
PLN023811066 PLN02381, PLN02381, valyl-tRNA synthetase 2e-19
PRK05743912 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewe 3e-19
PRK06039 975 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe 8e-19
PRK12300897 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed 4e-18
PRK12268556 PRK12268, PRK12268, methionyl-tRNA synthetase; Rev 9e-18
pfam08264148 pfam08264, Anticodon_1, Anticodon-binding domain o 3e-17
TIGR00398530 TIGR00398, metG, methionyl-tRNA synthetase 2e-16
PLN02943958 PLN02943, PLN02943, aminoacyl-tRNA ligase 4e-16
PRK13804961 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisi 9e-16
PRK13208800 PRK13208, valS, valyl-tRNA synthetase; Reviewed 3e-15
TIGR00395938 TIGR00395, leuS_arch, leucyl-tRNA synthetase, arch 7e-15
PRK05729874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 7e-13
PRK12267648 PRK12267, PRK12267, methionyl-tRNA synthetase; Rev 6e-11
cd00817382 cd00817, ValRS_core, catalytic core domain of valy 1e-10
PRK12268556 PRK12268, PRK12268, methionyl-tRNA synthetase; Rev 1e-10
PRK11893511 PRK11893, PRK11893, methionyl-tRNA synthetase; Rev 6e-10
PRK00133673 PRK00133, metG, methionyl-tRNA synthetase; Reviewe 7e-10
PLN02882 1159 PLN02882, PLN02882, aminoacyl-tRNA ligase 1e-09
COG0143558 COG0143, MetG, Methionyl-tRNA synthetase [Translat 2e-09
PRK12267648 PRK12267, PRK12267, methionyl-tRNA synthetase; Rev 9e-09
PRK12300897 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed 1e-08
PTZ00427 1205 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putati 5e-08
PLN02959 1084 PLN02959, PLN02959, aminoacyl-tRNA ligase 9e-08
cd00818338 cd00818, IleRS_core, catalytic core domain of isol 1e-07
cd00668312 cd00668, Ile_Leu_Val_MetRS_core, catalytic core do 2e-07
PRK05743912 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewe 2e-07
pfam00133606 pfam00133, tRNA-synt_1, tRNA synthetases class I ( 5e-07
cd00814319 cd00814, MetRS_core, catalytic core domain of meth 7e-07
PRK14900 1052 PRK14900, valS, valyl-tRNA synthetase; Provisional 1e-06
PRK13804961 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisi 1e-06
pfam09334388 pfam09334, tRNA-synt_1g, tRNA synthetases class I 6e-06
TIGR00398530 TIGR00398, metG, methionyl-tRNA synthetase 1e-05
cd07959117 cd07959, Anticodon_Ia_Leu_AEc, Anticodon-binding d 1e-05
PRK05729874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 1e-04
cd07962135 cd07962, Anticodon_Ia_Val, Anticodon-binding domai 3e-04
PLN02943958 PLN02943, PLN02943, aminoacyl-tRNA ligase 6e-04
PLN02882 1159 PLN02882, PLN02882, aminoacyl-tRNA ligase 6e-04
PRK06039975 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe 0.001
cd07961183 cd07961, Anticodon_Ia_Ile_ABEc, Anticodon-binding 0.001
PRK00133673 PRK00133, metG, methionyl-tRNA synthetase; Reviewe 0.002
>gnl|CDD|178177 PLN02563, PLN02563, aminoacyl-tRNA ligase Back     alignment and domain information 
 Score = 1829 bits (4739), Expect = 0.0
 Identities = 741/939 (78%), Positives = 821/939 (87%), Gaps = 4/939 (0%)

Query: 11  LPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIEEQKQKQQVVKRAYPFHEIE 70
           +  + +     + F   +R     S   +               +     KRAYPFHEIE
Sbjct: 29  VSSAQTPASASSYFRRSRRGGVSRS--LTRRAFAAPSALTSTTAKTTPAAKRAYPFHEIE 86

Query: 71  PKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRM 130
           PKWQ YWE NRTFRTPD++DTSKPKFYVLDMFPYPSGAGLHVGHP GYTATDILAR KRM
Sbjct: 87  PKWQRYWEENRTFRTPDDVDTSKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARYKRM 146

Query: 131 QGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTI 190
           QGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTL+NI RFR+QLKSLGFSYDW+REIST 
Sbjct: 147 QGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLKNIARFRSQLKSLGFSYDWDREISTT 206

Query: 191 EPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPM 250
           EP YYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDG+SERGGHPVIRKPM
Sbjct: 207 EPEYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGLSERGGHPVIRKPM 266

Query: 251 RQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKIT 310
           RQWMLKIT YADRLL+DLDDLDWPES+KEMQRNWIGRSEGAE+DF VLD +G+ERD KIT
Sbjct: 267 RQWMLKITAYADRLLEDLDDLDWPESIKEMQRNWIGRSEGAELDFSVLDGEGKERDEKIT 326

Query: 311 VYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTG 370
           VYTTRPDT+FGATYLVVAPEHPLLSSL +  Q + +EEY + ASRKSDLERTELQKEKTG
Sbjct: 327 VYTTRPDTLFGATYLVVAPEHPLLSSLTTAEQKEAVEEYVDAASRKSDLERTELQKEKTG 386

Query: 371 VFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMP 430
           VF+G YA NPA+GEAIPIWVADYVLGSYGTGAIMAVPAHDTRD EFA KFD+ I  VV P
Sbjct: 387 VFTGSYAINPATGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDFEFAQKFDLPIKWVVKP 446

Query: 431 DDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKL 490
            D +   +EKAYTGEG+IVNSS+  SGLDINGLS +EA  KVIEW E+TGNGKKKVNYKL
Sbjct: 447 ADGNEDDAEKAYTGEGVIVNSSS--SGLDINGLSSKEAAKKVIEWLEETGNGKKKVNYKL 504

Query: 491 RDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSW 550
           RDWLFARQRYWGEPIPVVFL+ +GE VP+ E++LPLTLPELDDFTPTGTGEPPL+KAVSW
Sbjct: 505 RDWLFARQRYWGEPIPVVFLEDSGEPVPVPESDLPLTLPELDDFTPTGTGEPPLAKAVSW 564

Query: 551 VQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSKELVDKTKERYWSPVDVYVGGA 610
           V T + SSGKPARRET+TMPQWAGSCWYYLRFMDPKNS  LVDK KE+YW PVD+YVGGA
Sbjct: 565 VNTVDPSSGKPARRETNTMPQWAGSCWYYLRFMDPKNSNALVDKEKEKYWMPVDLYVGGA 624

Query: 611 EHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDVDGSYISADST 670
           EHAVLHLLYARFWHKVLYDIGVVSTKEPF+C++NQG+ILGE++Y   KD DG Y+SAD+ 
Sbjct: 625 EHAVLHLLYARFWHKVLYDIGVVSTKEPFQCLVNQGMILGEVEYTAFKDSDGEYVSADTA 684

Query: 671 DTLGEYEQESIPEEKVMKSGDFFVMKDNPNIRLIARAHKMSKSRGNVVNPDDVVTEYGAD 730
           D LGE +QE IPEEKV+KSGD FV+KD+P+IRLIARAHKMSKSRGNVVNPDDVV+EYGAD
Sbjct: 685 DRLGELQQEKIPEEKVIKSGDSFVLKDDPSIRLIARAHKMSKSRGNVVNPDDVVSEYGAD 744

Query: 731 SLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVGSSLPDGTFKGGTVVNDEEPTL 790
           SLRLYEMFMGP RDSKTW+TSG+EGVHRFLGR WRL+VG+ LPDG+F+ GTVV DEEP+L
Sbjct: 745 SLRLYEMFMGPLRDSKTWSTSGVEGVHRFLGRTWRLVVGAPLPDGSFRDGTVVTDEEPSL 804

Query: 791 EQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKHPRKIIEPFILLLAPYAPH 850
           EQL  LHKCIAKVTEEIE TRFNT ISAMMEF NAAYKW+K PR+ IEPF+LLL+PYAPH
Sbjct: 805 EQLRLLHKCIAKVTEEIESTRFNTAISAMMEFTNAAYKWDKVPREAIEPFVLLLSPYAPH 864

Query: 851 MSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKTRGTIQVEEGCSEEEAFK 910
           ++EELWFRLGHSNSLAYE +P+ANP YL D T+VLP+QINGKTRGTI+VEEGCSE++AF 
Sbjct: 865 LAEELWFRLGHSNSLAYEPWPEANPSYLVDDTVVLPVQINGKTRGTIEVEEGCSEDDAFA 924

Query: 911 LASLDEKLSKFLDGKSIKKRIYVPGRILNVILDRQNIKA 949
           LAS DEKLSK+LDGK IKKRIYVPG+ILNVIL +QN+K 
Sbjct: 925 LASQDEKLSKYLDGKEIKKRIYVPGKILNVILKQQNVKV 963

Length = 963
>gnl|CDD|232956 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>gnl|CDD|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|223569 COG0495, LeuS, Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|173906 cd00812, LeuRS_core, catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|222257 pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase, Domain 2 Back     alignment and domain information
>gnl|CDD|232969 TIGR00422, valS, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|232953 TIGR00392, ileS, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|223138 COG0060, IleS, Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215739 pfam00133, tRNA-synt_1, tRNA synthetases class I (I, L, M and V) Back     alignment and domain information
>gnl|CDD|185677 cd00817, ValRS_core, catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|153412 cd07958, Anticodon_Ia_Leu_BEm, Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|173906 cd00812, LeuRS_core, catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|185674 cd00668, Ile_Leu_Val_MetRS_core, catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|232955 TIGR00395, leuS_arch, leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>gnl|CDD|237855 PRK14900, valS, valyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|173907 cd00814, MetRS_core, catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|220185 pfam09334, tRNA-synt_1g, tRNA synthetases class I (M) Back     alignment and domain information
>gnl|CDD|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215452 PLN02843, PLN02843, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|237012 PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215214 PLN02381, PLN02381, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|235588 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237029 PRK12268, PRK12268, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|219767 pfam08264, Anticodon_1, Anticodon-binding domain of tRNA Back     alignment and domain information
>gnl|CDD|232957 TIGR00398, metG, methionyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|215509 PLN02943, PLN02943, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|237514 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|232955 TIGR00395, leuS_arch, leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237028 PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|185677 cd00817, ValRS_core, catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|237029 PRK12268, PRK12268, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237012 PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|234655 PRK00133, metG, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|237028 PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173617 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>gnl|CDD|215518 PLN02959, PLN02959, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|185674 cd00668, Ile_Leu_Val_MetRS_core, catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|235588 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215739 pfam00133, tRNA-synt_1, tRNA synthetases class I (I, L, M and V) Back     alignment and domain information
>gnl|CDD|173907 cd00814, MetRS_core, catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|237855 PRK14900, valS, valyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237514 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|220185 pfam09334, tRNA-synt_1g, tRNA synthetases class I (M) Back     alignment and domain information
>gnl|CDD|232957 TIGR00398, metG, methionyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|153413 cd07959, Anticodon_Ia_Leu_AEc, Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|153416 cd07962, Anticodon_Ia_Val, Anticodon-binding domain of valyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|215509 PLN02943, PLN02943, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|153415 cd07961, Anticodon_Ia_Ile_ABEc, Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|234655 PRK00133, metG, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 952
PLN02563963 aminoacyl-tRNA ligase 100.0
TIGR00396842 leuS_bact leucyl-tRNA synthetase, eubacterial and 100.0
KOG0435876 consensus Leucyl-tRNA synthetase [Translation, rib 100.0
COG0495814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 100.0
PRK00390805 leuS leucyl-tRNA synthetase; Validated 100.0
COG0060933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 100.0
COG0525877 ValS Valyl-tRNA synthetase [Translation, ribosomal 100.0
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 100.0
PRK05743912 ileS isoleucyl-tRNA synthetase; Reviewed 100.0
PRK13804961 ileS isoleucyl-tRNA synthetase; Provisional 100.0
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 100.0
TIGR00392861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 100.0
PLN02882 1159 aminoacyl-tRNA ligase 100.0
PTZ00419995 valyl-tRNA synthetase-like protein; Provisional 100.0
PLN023811066 valyl-tRNA synthetase 100.0
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 100.0
PLN02943958 aminoacyl-tRNA ligase 100.0
PRK13208800 valS valyl-tRNA synthetase; Reviewed 100.0
TIGR00422861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 100.0
PLN02843974 isoleucyl-tRNA synthetase 100.0
PRK05729874 valS valyl-tRNA synthetase; Reviewed 100.0
PLN02959 1084 aminoacyl-tRNA ligase 100.0
TIGR00395938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 100.0
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 100.0
KOG0433937 consensus Isoleucyl-tRNA synthetase [Translation, 100.0
PRK12300897 leuS leucyl-tRNA synthetase; Reviewed 100.0
KOG0434 1070 consensus Isoleucyl-tRNA synthetase [Translation, 100.0
KOG0432995 consensus Valyl-tRNA synthetase [Translation, ribo 100.0
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 100.0
PRK12267648 methionyl-tRNA synthetase; Reviewed 100.0
PRK12268556 methionyl-tRNA synthetase; Reviewed 100.0
PLN02224616 methionine-tRNA ligase 100.0
TIGR00398530 metG methionyl-tRNA synthetase. The methionyl-tRNA 100.0
PRK11893511 methionyl-tRNA synthetase; Reviewed 100.0
PRK00133673 metG methionyl-tRNA synthetase; Reviewed 100.0
PLN02610 801 probable methionyl-tRNA synthetase 100.0
COG0143558 MetG Methionyl-tRNA synthetase [Translation, ribos 100.0
KOG0437 1080 consensus Leucyl-tRNA synthetase [Translation, rib 100.0
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 100.0
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 100.0
KOG0436578 consensus Methionyl-tRNA synthetase [Translation, 100.0
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 100.0
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 100.0
PF09334391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 100.0
PRK00260463 cysS cysteinyl-tRNA synthetase; Validated 100.0
TIGR00435465 cysS cysteinyl-tRNA synthetase. This model finds t 100.0
PTZ00399651 cysteinyl-tRNA-synthetase; Provisional 100.0
PF13603185 tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; P 100.0
PRK12418384 cysteinyl-tRNA synthetase; Provisional 100.0
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 100.0
KOG1247567 consensus Methionyl-tRNA synthetase [Translation, 100.0
PRK14535699 cysS cysteinyl-tRNA synthetase; Provisional 100.0
PLN02946557 cysteine-tRNA ligase 100.0
PRK14536490 cysS cysteinyl-tRNA synthetase; Provisional 100.0
PRK14534481 cysS cysteinyl-tRNA synthetase; Provisional 99.98
COG0215464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 99.97
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 99.96
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 99.95
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 99.93
cd00674353 LysRS_core_class_I catalytic core domain of class 99.93
KOG2007586 consensus Cysteinyl-tRNA synthetase [Translation, 99.92
PRK00750510 lysK lysyl-tRNA synthetase; Reviewed 99.88
TIGR00467515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 99.73
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 99.66
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 99.66
cd07961183 Anticodon_Ia_Ile_ABEc Anticodon-binding domain of 99.59
cd07960180 Anticodon_Ia_Ile_BEm Anticodon-binding domain of b 99.45
COG0018577 ArgS Arginyl-tRNA synthetase [Translation, ribosom 99.42
cd07959117 Anticodon_Ia_Leu_AEc Anticodon-binding domain of a 99.4
PRK12451562 arginyl-tRNA synthetase; Reviewed 99.39
cd07958117 Anticodon_Ia_Leu_BEm Anticodon-binding domain of b 99.38
PF08264153 Anticodon_1: Anticodon-binding domain of tRNA; Int 99.33
cd00802143 class_I_aaRS_core catalytic core domain of class I 99.29
PLN02286576 arginine-tRNA ligase 99.11
cd07962135 Anticodon_Ia_Val Anticodon-binding domain of valyl 99.08
cd07957129 Anticodon_Ia_Met Anticodon-binding domain of methi 99.06
PF01921360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 98.76
COG1384521 LysS Lysyl-tRNA synthetase (class I) [Translation, 98.49
PF00750354 tRNA-synt_1d: tRNA synthetases class I (R); InterP 98.24
cd07375117 Anticodon_Ia_like Anticodon-binding domain of clas 98.22
cd09287240 GluRS_non_core catalytic core domain of non-discri 98.17
PRK04156567 gltX glutamyl-tRNA synthetase; Provisional 97.95
TIGR00463560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 97.65
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 97.21
PTZ00402601 glutamyl-tRNA synthetase; Provisional 97.18
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 97.15
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 97.14
PRK12558445 glutamyl-tRNA synthetase; Provisional 97.13
PLN03233523 putative glutamate-tRNA ligase; Provisional 97.1
PTZ00437574 glutaminyl-tRNA synthetase; Provisional 97.1
TIGR00440522 glnS glutaminyl-tRNA synthetase. This protein is a 97.07
PRK05347554 glutaminyl-tRNA synthetase; Provisional 96.98
PLN02907722 glutamate-tRNA ligase 96.95
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 96.85
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 96.73
PRK14703771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 96.64
cd00808239 GluRS_core catalytic core domain of discriminating 96.6
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 96.57
PLN02627535 glutamyl-tRNA synthetase 96.54
PRK12410433 glutamylglutaminyl-tRNA synthetase; Provisional 96.45
PRK14895513 gltX glutamyl-tRNA synthetase; Provisional 96.44
TIGR00464470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 96.41
PLN02859788 glutamine-tRNA ligase 96.39
KOG1147712 consensus Glutamyl-tRNA synthetase [Translation, r 96.06
PRK01406476 gltX glutamyl-tRNA synthetase; Reviewed 96.0
PF00750354 tRNA-synt_1d: tRNA synthetases class I (R); InterP 95.24
PRK06039975 ileS isoleucyl-tRNA synthetase; Reviewed 94.77
COG0060933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 94.28
PLN028821159 aminoacyl-tRNA ligase 94.24
TIGR00392861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 93.92
KOG4426656 consensus Arginyl-tRNA synthetase [Translation, ri 93.73
PTZ004271205 isoleucine-tRNA ligase, putative; Provisional 93.64
TIGR00422861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 93.54
cd00395273 Tyr_Trp_RS_core catalytic core domain of tyrosinyl 93.47
PRK149001052 valS valyl-tRNA synthetase; Provisional 93.45
PRK13208800 valS valyl-tRNA synthetase; Reviewed 93.43
KOG1148764 consensus Glutaminyl-tRNA synthetase [Translation, 92.85
PRK05743912 ileS isoleucyl-tRNA synthetase; Reviewed 92.75
cd00805269 TyrRS_core catalytic core domain of tyrosinyl-tRNA 92.6
PRK05729874 valS valyl-tRNA synthetase; Reviewed 92.47
PRK12556332 tryptophanyl-tRNA synthetase; Provisional 91.24
PRK13804961 ileS isoleucyl-tRNA synthetase; Provisional 90.59
PLN02843974 isoleucyl-tRNA synthetase 90.48
PTZ00419995 valyl-tRNA synthetase-like protein; Provisional 90.47
cd00802143 class_I_aaRS_core catalytic core domain of class I 90.01
PLN02943958 aminoacyl-tRNA ligase 89.58
PRK13354410 tyrosyl-tRNA synthetase; Provisional 89.39
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 89.3
PF00579292 tRNA-synt_1b: tRNA synthetases class I (W and Y); 88.76
PRK05912408 tyrosyl-tRNA synthetase; Validated 88.48
PLN023811066 valyl-tRNA synthetase 88.48
TIGR00395938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 88.37
KOG1195567 consensus Arginyl-tRNA synthetase [Translation, ri 87.16
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 85.84
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 84.46
PRK12300897 leuS leucyl-tRNA synthetase; Reviewed 84.43
PRK12284431 tryptophanyl-tRNA synthetase; Reviewed 84.28
PLN02486383 aminoacyl-tRNA ligase 83.88
COG0495814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 82.75
PRK04156567 gltX glutamyl-tRNA synthetase; Provisional 81.38
TIGR00233328 trpS tryptophanyl-tRNA synthetase. This model repr 81.28
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information 
Probab=100.00  E-value=2.8e-204  Score=1859.55  Aligned_cols=900  Identities=82%  Similarity=1.361  Sum_probs=826.0

Q ss_pred             hhhHHHHHhhcccccCCChhhhhHHHHHHHHHcCCCCCCCCCCCCCCcEEEEcCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 002217           48 NEIEEQKQKQQVVKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARL  127 (952)
Q Consensus        48 ~~~~~~~~~~~~~~~~y~~~~iE~k~~~~W~~~~~f~~~~~~~~~k~kf~i~~~~Pypng~~lHiGH~~~~~~~Di~~Ry  127 (952)
                      ...++..++++.+++.|||.+||++||++|+++++|+...+.+.++++||+++|||||||.+|||||+++|+++|+++||
T Consensus        64 ~~~~~~~~~~~~~~~~y~~~~iE~kwq~~W~e~~~f~~~~~~~~~k~k~~v~~~~PYpnG~~lHiGH~~~y~~~DviaRy  143 (963)
T PLN02563         64 ALTSTTAKTTPAAKRAYPFHEIEPKWQRYWEENRTFRTPDDVDTSKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARY  143 (963)
T ss_pred             chhhhhhhcccccCCCCCHHHHHHHHHHHHHhCCCccccccccCCCCCEEEEeCCCCCCCcccchhhHHHHHHHHHHHHH
Confidence            33444455555789999999999999999999999997643456889999999999999944999999999999999999


Q ss_pred             HHHcCCcccccccccccChHHHHHHHHhCCCchHHHHHHHHHHHHHHHHcCCccccCCcccCCChhHHHHHHHHHHHHHH
Q 002217          128 KRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLK  207 (952)
Q Consensus       128 ~r~~G~~V~~~~G~D~~Glpie~~a~~~g~~~~~~~~~~~~~~~~~l~~lgi~~Dw~~~~~T~~~~~~~~v~~~f~~L~~  207 (952)
                      +||+||+|+|++||||||+|||++|++.|.+|++++.++++.|++||++||+++||++++.|+||+|++++||+|.+|++
T Consensus       144 ~Rm~G~~Vl~~~G~D~~GlPiE~~a~~~g~~p~~~~~~~i~~~~~q~~~lG~s~DW~r~~~T~dp~y~~~~q~~F~~L~~  223 (963)
T PLN02563        144 KRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLKNIARFRSQLKSLGFSYDWDREISTTEPEYYKWTQWIFLQLLK  223 (963)
T ss_pred             HHhcCCeecccccccccCcHHHHHHHHcCCChHHhHHHHHHHHHHHHHHhCcEeeCCCCeecCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceeeeccccccCCCCCcccCchhhccCccccCCCCeEEeeccccchhhhhhhhHhhccCCCCCCchHHHHHHHhhhcc
Q 002217          208 RGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGR  287 (952)
Q Consensus       208 kGliy~~~~~v~wc~~~~t~ls~~Ev~~~~~~~~~~~~~~~~~~~~~~~i~~y~~~l~~~l~~~~~p~~~~~~~~~~i~~  287 (952)
                      +||||++.++|+|||.|+|+||++||++++|++||.++++++++||||+|++|+++|+++|+.++||++++.||+|||||
T Consensus       224 ~GliY~~~~~v~wcp~~~T~La~~Ev~~~~~~~~~~~~~~~~~~q~f~~it~ya~~L~~~l~~~~wp~~v~~~q~nwiG~  303 (963)
T PLN02563        224 RGLAYQAEVPVNWCPALGTVLANEEVVDGLSERGGHPVIRKPMRQWMLKITAYADRLLEDLDDLDWPESIKEMQRNWIGR  303 (963)
T ss_pred             CCCEEeeeeeeeecCCcCCCCCHHHhhcCCCcCCCCceEEEecceeEEecchhHHHHHHhhhhcCCCHHHHHHHHHhccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEEEecCCCCccCcEEEEecCCcchhccccEEEECCCCccchhhccccchHHHHHHHHHHhccchhhHhhhhhc
Q 002217          288 SEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKE  367 (952)
Q Consensus       288 s~~~~v~f~~~~~~~~~~~~~i~i~TT~P~Tl~g~~~v~v~p~~~y~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~  367 (952)
                      |+|++|+|++.+.++...+.+|+|||||||||||++||+|||+|+|+..++..++...+++|+..+.+.+++++....++
T Consensus       304 s~g~~i~F~~~~~~~~~~~~~l~V~TTrPeTl~g~t~iav~p~~~yv~~~~~~~~~~~v~~y~~~~~~~~~~~~~~~~~~  383 (963)
T PLN02563        304 SEGAELDFSVLDGEGKERDEKITVYTTRPDTLFGATYLVVAPEHPLLSSLTTAEQKEAVEEYVDAASRKSDLERTELQKE  383 (963)
T ss_pred             cceEEEEEEecCccccCCCCEEEEEeCCChHHhhccEEEECCCChhhHhhhcccchHHHHHHHHHHhchhHHhhhhccce
Confidence            99999999986432211246899999999999999999999999999877666666677889988777777776555577


Q ss_pred             ccccccceEEecCCCCCcccEEecCcccCCCCCCceEecCCCChhhHHHHHHcCCceeeeecCCCCCCccccccccccce
Q 002217          368 KTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGL  447 (952)
Q Consensus       368 ~~~~l~g~~~~~P~~~~~~pv~~~~~V~~~~GTG~V~~~Pah~~~D~~~~~~~~L~i~~vv~~~~~~~~~~~~~y~~~g~  447 (952)
                      ++|.|+|.++.||++|+.+|||.++||++++|||+||+|||||++||+||++||||++++|++.|+......+.|.++|+
T Consensus       384 k~g~~~g~~~~~P~~~~~iPI~~ad~V~~~~GTGaVm~~PaHd~~D~~~a~k~~Lpi~~vI~~~d~~~~~~~~~y~~~G~  463 (963)
T PLN02563        384 KTGVFTGSYAINPATGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDFEFAQKFDLPIKWVVKPADGNEDDAEKAYTGEGV  463 (963)
T ss_pred             ecccccCcEEeccCCCCeeEEEEecccCCCCCCCeEEEcCCCCHHHHHHHHHcCCCceeeeccCccccccccccccCcee
Confidence            89999999999999999999999999999999999999999999999999999999999997642222223468999999


Q ss_pred             EEcccCcccccccCCCCHHHHHHHHHHHHHHcCCCcceecccCCceeecccCCCCcccCceEeCCCCceeecCCCCcCCC
Q 002217          448 IVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLT  527 (952)
Q Consensus       448 l~~~~~~~~~~~~~gl~~~~a~~~ii~~l~~~~~~~~~~~~~l~DW~ISRQR~WG~PIPv~~~~~~~~~~~~~~~~l~v~  527 (952)
                      |+|+..  .+++++||..++|+++|+++|++.|.++++++|++||||||||||||+|||+|||++||+++++++++||+.
T Consensus       464 l~ns~~--~~~~~~Gl~~~eA~~~Ii~~L~~~g~~~~~v~y~lrDW~ISRQRyWG~PIPi~~c~~cg~~v~v~e~~Lpv~  541 (963)
T PLN02563        464 IVNSSS--SGLDINGLSSKEAAKKVIEWLEETGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLEDSGEPVPVPESDLPLT  541 (963)
T ss_pred             EecCCC--cccccCCcCHHHHHHHHHHHHHhCCCCCCeeEecCCCceEeeecccCCceEEEEEcCCCcEEecchHhCccc
Confidence            999753  124599999999999999999999999999999999999999999999999999999998999999999999


Q ss_pred             CCcccccCCCCCCCCCCccccccccccccCCCCCccccCCCccccccccchhheecCCCCchhHhhhhhhhcCCCceeEe
Q 002217          528 LPELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSKELVDKTKERYWSPVDVYV  607 (952)
Q Consensus       528 lp~~~~~~~~G~~~~~l~~~~~w~~~~~~~~g~~~~re~d~lD~WfdSswy~~~~~~p~~~~~~~~~~~~~~w~PvDlyv  607 (952)
                      ||+++++.+.|.|.+||.++.+|+++.||+||++++||||||||||||||||+||++|++++++|+++..++|||||+|+
T Consensus       542 lpe~~~~~~~~~g~~pl~~~~~~~~~~~p~cg~~~~RetDtmDtw~~Sswy~~r~~~p~~~~~~~~~~~~~~w~PvD~yi  621 (963)
T PLN02563        542 LPELDDFTPTGTGEPPLAKAVSWVNTVDPSSGKPARRETNTMPQWAGSCWYYLRFMDPKNSNALVDKEKEKYWMPVDLYV  621 (963)
T ss_pred             chhhhhcccCCCCCCchhcchhhhcCcCcCCCCCcEECCCcCCchhhccHHHHHHhCCCccccccCHHHHhCcCCCcEee
Confidence            99998898889999999999999999999999999999999999999999999999999999999988888999999999


Q ss_pred             cCchhhHHHHHHHHHHHHHHHHhcCcCCCCcchhhhhhceeccccceeEEecCCCccccCCCCCcccccccccCcccccc
Q 002217          608 GGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDVDGSYISADSTDTLGEYEQESIPEEKVM  687 (952)
Q Consensus       608 ~G~D~~~~HLly~Rfw~~~L~~~~~~~~~~PFk~l~~~G~vl~~~~y~~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~v~  687 (952)
                      ||+||+++||||+||||++|+++|++.+++||++|++||||+++++|.+|+|++|+|++.+.++..+......+|.+.|.
T Consensus       622 gG~dhailHLlY~Rfw~~~l~~~g~~~~~ePfk~ll~qGmVl~~~~~~~~~d~~G~~~~~~~~~~~~~~~~~~~~~~~~~  701 (963)
T PLN02563        622 GGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFQCLVNQGMILGEVEYTAFKDSDGEYVSADTADRLGELQQEKIPEEKVI  701 (963)
T ss_pred             ccHHHHhhHhHHHHHHHHHHHHhhccCCcccHHHHhccceeecCccccceecCCCcCccccccccccccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999777777777778889999999


Q ss_pred             ccCCceeeccCcchhhcccccccccCCCCCCChhhHHhhhCchhhhhhhhhcCCCCCCCCCChhhHHHHHHHHHHHHHHH
Q 002217          688 KSGDFFVMKDNPNIRLIARAHKMSKSRGNVVNPDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLI  767 (952)
Q Consensus       688 ~~~~~~vl~~~~~~~v~~~g~KMSKSkGNvV~P~eii~~YGaDalRl~ll~~~~~~~~~~~s~~~i~~~~r~l~~l~~~~  767 (952)
                      .+++.+++.++..+.|.++++||||||||||+|.++|++||||+||||+|+++|..++..|+++++++++|||+|+|+++
T Consensus       702 ~~~~~~~~~~~~~~~~~~~~eKMSKSKGNvVdP~eiI~kYGADaLRl~ll~~ap~~dd~~w~~~~V~g~~rfL~rlwn~~  781 (963)
T PLN02563        702 KSGDSFVLKDDPSIRLIARAHKMSKSRGNVVNPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTSGVEGVHRFLGRTWRLV  781 (963)
T ss_pred             ccccccccccCCcccccccccccccccCCcCCHHHHHHHcCcHHHHHHHHhCCCcccccccCHHHHHHHHHHHHHHHHHH
Confidence            99988998776777788899999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hccCCCCCCCCCCccCCCCCChHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHhcccchhHHHHHHHHHHhCCc
Q 002217          768 VGSSLPDGTFKGGTVVNDEEPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKHPRKIIEPFILLLAPY  847 (952)
Q Consensus       768 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~l~~~i~~v~~~~e~~~f~~ai~~l~~f~~~~~~~~~~~~~vL~~l~~LLaPf  847 (952)
                      ......+..+.+.........+.|+++++++++++|+++|++|+|++|++++|+|+|.+++|....+++++.+++|||||
T Consensus       782 ~~~~~~~~~~~~~~~~~~~~~d~~ll~kl~~~ikkVte~~e~y~FntAi~~lmef~n~l~~~~~~~~~~l~~ll~LLaPf  861 (963)
T PLN02563        782 VGAPLPDGSFRDGTVVTDEEPSLEQLRLLHKCIAKVTEEIESTRFNTAISAMMEFTNAAYKWDKVPREAIEPFVLLLSPY  861 (963)
T ss_pred             HHhhhcccccCccccccCCcchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHhh
Confidence            65321111121111111224578999999999999999999999999999999999999988767789999999999999


Q ss_pred             chhHHHHHHHHcCCCCCccccCCCCCCccccCCCceEEeEEEeceeEEEEEecCCCCHHHHHHHHccCHHHHhhhCCCCe
Q 002217          848 APHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKTRGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSI  927 (952)
Q Consensus       848 ~P~iaEElw~~L~~~~sV~~~~WP~~~~~~l~~~~i~l~vqVngk~r~~i~v~~~~s~e~~~~~~~~~~~~~~~l~gk~i  927 (952)
                      |||+|||||+.|+..+||++++||+++++++.+++++++||||||+|++++++.++++|++.++++++++++++|+||+|
T Consensus       862 ~PhiaEELW~~Lg~~~sv~~~~WP~~d~~~l~~~~~~~~vqiNGK~r~~i~v~~~~~~~~i~~~a~~~~~v~~~l~~k~i  941 (963)
T PLN02563        862 APHLAEELWFRLGHSNSLAYEPWPEANPSYLVDDTVVLPVQINGKTRGTIEVEEGCSEDDAFALASQDEKLSKYLDGKEI  941 (963)
T ss_pred             hhhHHHHHHHHcCCCCeeeeCCCCCCCHHHhhcCceEEEEEECCEEeeEEEeCCCCCHHHHHHHHhcCHHHHHHhCCCCc
Confidence            99999999999998889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCcEEEEEecCCcccc
Q 002217          928 KKRIYVPGRILNVILDRQNIKA  949 (952)
Q Consensus       928 ~kvi~vp~kiin~v~~~~~~~~  949 (952)
                      +|+|+|||||||||++++++++
T Consensus       942 ~K~I~vp~kivNiV~~~~~~~~  963 (963)
T PLN02563        942 KKRIYVPGKILNVILKQQNVKV  963 (963)
T ss_pred             eEEEEECCcEEEEEeCCCcCCC
Confidence            9999999999999999999875

>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>KOG0435 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>KOG0433 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG0434 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0432 consensus Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0437 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>KOG0436 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>PF13603 tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; PDB: 2AJH_B 4ARI_A 2AJG_B 4AQ7_D 2AJI_B 4ARC_A 4AS1_A 2BTE_A 2V0G_A 2BYT_A Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>KOG1247 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>KOG2007 consensus Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>cd07961 Anticodon_Ia_Ile_ABEc Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases Back     alignment and domain information
>cd07960 Anticodon_Ia_Ile_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases Back     alignment and domain information
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd07959 Anticodon_Ia_Leu_AEc Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases Back     alignment and domain information
>PRK12451 arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd07958 Anticodon_Ia_Leu_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases Back     alignment and domain information
>PF08264 Anticodon_1: Anticodon-binding domain of tRNA; InterPro: IPR013155 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>PLN02286 arginine-tRNA ligase Back     alignment and domain information
>cd07962 Anticodon_Ia_Val Anticodon-binding domain of valyl tRNA synthetases Back     alignment and domain information
>cd07957 Anticodon_Ia_Met Anticodon-binding domain of methionyl tRNA synthetases Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd07375 Anticodon_Ia_like Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>KOG4426 consensus Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>cd00395 Tyr_Trp_RS_core catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG1148 consensus Glutaminyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12556 tryptophanyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK13354 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PF00579 tRNA-synt_1b: tRNA synthetases class I (W and Y); InterPro: IPR002305 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK05912 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>KOG1195 consensus Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12284 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02486 aminoacyl-tRNA ligase Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00233 trpS tryptophanyl-tRNA synthetase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query952
1obh_A878 Leucyl-Trna Synthetase From Thermus Thermophilus Co 0.0
2v0c_A878 Leucyl-Trna Synthetase From Thermus Thermophilus Co 0.0
4aq7_A880 Ternary Complex Of E. Coli Leucyl-Trna Synthetase, 1e-178
3ziu_A637 Crystal Structure Of Mycoplasma Mobile Leucyl-trna 1e-82
3ziu_A637 Crystal Structure Of Mycoplasma Mobile Leucyl-trna 2e-81
3o0a_A219 Crystal Structure Of The Wild Type Cp1 Hydrolitic D 6e-39
3pz0_A221 The Crystal Structure Of Aaleurs-Cp1 Length = 221 4e-37
3pz5_A201 The Crystal Structure Of Aaleurs-Cp1-D20 Length = 2 2e-36
2ajg_A196 Crystal Structure Of The Editing Domain Of E. Coli 2e-29
1wkb_A810 Crystal Structure Of Leucyl-Trna Synthetase From Th 8e-27
1wkb_A810 Crystal Structure Of Leucyl-Trna Synthetase From Th 2e-11
1wz2_A 967 The Crystal Structure Of Leucyl-Trna Synthetase And 3e-24
1wz2_A967 The Crystal Structure Of Leucyl-Trna Synthetase And 6e-12
1qu2_A917 Insights Into Editing From An Ile-Trna Synthetase S 8e-22
1gax_A862 Crystal Structure Of Thermus Thermophilus Valyl-Trn 3e-16
1gax_A862 Crystal Structure Of Thermus Thermophilus Valyl-Trn 5e-05
1jzq_A821 Isoleucyl-Trna Synthetase Complexed With Isoleucyl- 7e-13
1jzq_A821 Isoleucyl-Trna Synthetase Complexed With Isoleucyl- 1e-07
2csx_A497 Crystal Structure Of Aquifex Aeolicus Methionyl-Trn 1e-09
4dlp_A536 Crystal Structure Of Methionyl-Trna Synthetase Metr 2e-09
2x1l_A524 Crystal Structure Of Mycobacterium Smegmatis Methio 1e-08
1woy_A500 Crystal Structure Of Methionyl Trna Synthetase Y225 2e-08
1a8h_A500 Methionyl-Trna Synthetase From Thermus Thermophilus 2e-08
2d54_A502 Crystal Structure Of Methionyl Trna Synthetase Y225 2e-08
3kfl_A564 Leishmania Major Methionyl-Trna Synthetase In Compl 3e-06
1f4l_A551 Crystal Structure Of The E.Coli Methionyl-Trna Synt 8e-04
1p7p_A551 Methionyl-trna Synthetase From Escherichia Coli Com 8e-04
1qqt_A551 Methionyl-Trna Synthetase From Escherichia Coli Len 9e-04
>pdb|1OBH|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Pre-Transfer Editing Substrate Analogue In Both Synthetic Active Site And Editing Site Length = 878 Back     alignment and structure 
Iteration: 1

 Score =  698 bits (1802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/893 (43%), Positives = 527/893 (59%), Gaps = 34/893 (3%)
Query: 64  YPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDI 123
           Y  H IE KWQ +WE  + F    ++   + K YVL MFPYPSG  LH+GH   YT  D+
Sbjct: 4   YNPHAIEAKWQRFWEE-KGFMKAKDLPGGRGKQYVLVMFPYPSG-DLHMGHLKNYTMGDV 61
Query: 124 LARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDW 183
           LAR +RMQGY VLHPMGWDAFGLPAE  A++ G HPK  T  NI + +  L+ +G  YDW
Sbjct: 62  LARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVHPKDWTYANIRQAKESLRLMGILYDW 121
Query: 184 NREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERG-G 242
           +RE++T EP YY+W QWIFL++ ++GLAY+A+  VNWCP   TVLANE+VV+G   R   
Sbjct: 122 DREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHED 181
Query: 243 HPVIRKPMRQWMLKITEYAXXXXXXXXXXXWPESVKEMQRNWIGRSEGAEMDFRVLDSDG 302
            PV ++ + QW L+IT YA           WPE VK MQR WIGRSEGAE+ F V     
Sbjct: 182 TPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGRSEGAEILFPV----- 236
Query: 303 QERDIKITVYTTRPDTIFGATYLVVAPEHPXXXXXXXXXXXXNIEEYKNLASRKSDLERT 362
           + ++++I V+TTRPDT+FGAT+LV+APEHP             +  Y   A RK+++ER 
Sbjct: 237 EGKEVRIPVFTTRPDTLFGATFLVLAPEHPLTLELAAPEKREEVLAYVEAAKRKTEIERQ 296
Query: 363 ELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDI 422
              +EKTGVF G YA NPA+GE IPIW ADYVL  YGTGAIMAVPAHD RD+EFA KF +
Sbjct: 297 AEGREKTGVFLGAYALNPATGERIPIWTADYVLFGYGTGAIMAVPAHDQRDYEFARKFGL 356
Query: 423 SIHSVV-MPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGN 481
            I  V+  P +      E+AY   G++VNS         +G   +E   KVI W E+ G 
Sbjct: 357 PIKKVIERPGEPLPEPLERAYEEPGIMVNSGPF------DGTESEEGKRKVIAWLEEKGL 410
Query: 482 GKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPT-GTG 540
           GK +V Y+LRDWL +RQRYWG PIP+V  +  G  VP+ E ELP+ LP+L D       G
Sbjct: 411 GKGRVTYRLRDWLISRQRYWGTPIPMVHCEACG-VVPVPEEELPVLLPDLKDVEDIRPKG 469
Query: 541 EPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSKELVDKTKERYW 600
           + PL     + +TT    G PA+R+T TM  +  S WYYLR+ DP N +   D  K   W
Sbjct: 470 KSPLEAHPEFYETTCPKCGGPAKRDTDTMDTFFDSSWYYLRYTDPHNDRLPFDPEKANAW 529
Query: 601 SPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDV 660
            PVD Y+GG EHAVLHLLY+RF+ K L+D+G+V  +EPF+ +  QG++L    +    +V
Sbjct: 530 MPVDQYIGGVEHAVLHLLYSRFFTKFLHDLGMVKVEEPFQGLFTQGMVLAWTDFGPV-EV 588
Query: 661 DGSYIS-ADSTDTLGEYEQESIPEEKVMKSGDFFVMKDNPNIRLIARAHKMSKSRGNVVN 719
           +GS +   + T    E  + ++  E V K G      ++  + L   A  MSKS+GN V 
Sbjct: 589 EGSVVRLPEPTRIRLEIPESALSLEDVRKMGAELRPHEDGTLHLWKPA-VMSKSKGNGVM 647
Query: 720 PDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVGSSLP----DG 775
               V E GAD  R+  +F  P  +   W   G++G  RFL R++R +           G
Sbjct: 648 VGPFVKEQGADIARITILFAAPPENEMVWTEEGVQGAWRFLNRIYRRVAEDREALLETSG 707
Query: 776 TFKGGTVVNDEEPTLEQLCTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKHP-- 833
            F+   +   +    E    LH+ + KVTE++E  RFNT I+A+MEF+NA Y++ K    
Sbjct: 708 VFQAEALEGKDR---ELYGKLHETLKKVTEDLEALRFNTAIAALMEFLNALYEYRKDRPV 764
Query: 834 ----RKIIEPFILLLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQI 889
               R  I  ++ +L P+APH++EELW      +SL    +P+ +   L+   + + +Q+
Sbjct: 765 TPVYRTAIRYYLQMLFPFAPHLAEELWHWF-WPDSLFEAGWPELDEKALEKDVVEVAVQV 823
Query: 890 NGKTRGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSIKKRIYVPGRILNVIL 942
           NG+ RGTI + +    E A   A     +   L+GK + K IYVPG+ILN+++
Sbjct: 824 NGRVRGTIHIPKDAPLEVARAEALKVRNVRAHLEGKEVVKEIYVPGKILNLVV 876
>pdb|2V0C|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Sulphamoyl Analogue Of Leucyl-Adenylate In The Synthetic Site And An Adduct Of Amp With 5-Fluoro-1,3- Dihydro-1-Hydroxy-2,1-Benzoxaborole (An2690) In The Editing Site Length = 878 Back     alignment and structure
>pdb|4AQ7|A Chain A, Ternary Complex Of E. Coli Leucyl-Trna Synthetase, Trna(Leu) And Leucyl-Adenylate Analogue In The Aminoacylation Conformation Length = 880 Back     alignment and structure
>pdb|3ZIU|A Chain A, Crystal Structure Of Mycoplasma Mobile Leucyl-trna Synthetase With Leu-ams In The Active Site Length = 637 Back     alignment and structure
>pdb|3ZIU|A Chain A, Crystal Structure Of Mycoplasma Mobile Leucyl-trna Synthetase With Leu-ams In The Active Site Length = 637 Back     alignment and structure
>pdb|3O0A|A Chain A, Crystal Structure Of The Wild Type Cp1 Hydrolitic Domain From Aquifex Aeolicus Leucyl-Trna Length = 219 Back     alignment and structure
>pdb|3PZ0|A Chain A, The Crystal Structure Of Aaleurs-Cp1 Length = 221 Back     alignment and structure
>pdb|3PZ5|A Chain A, The Crystal Structure Of Aaleurs-Cp1-D20 Length = 201 Back     alignment and structure
>pdb|2AJG|A Chain A, Crystal Structure Of The Editing Domain Of E. Coli Leucyl- Trna Synthetase Length = 196 Back     alignment and structure
>pdb|1WKB|A Chain A, Crystal Structure Of Leucyl-Trna Synthetase From The Archaeon Pyrococcus Horikoshii Reveals A Novel Editing Domain Orientation Length = 810 Back     alignment and structure
>pdb|1WKB|A Chain A, Crystal Structure Of Leucyl-Trna Synthetase From The Archaeon Pyrococcus Horikoshii Reveals A Novel Editing Domain Orientation Length = 810 Back     alignment and structure
>pdb|1WZ2|A Chain A, The Crystal Structure Of Leucyl-Trna Synthetase And Trna(Leucine) Complex Length = 967 Back     alignment and structure
>pdb|1WZ2|A Chain A, The Crystal Structure Of Leucyl-Trna Synthetase And Trna(Leucine) Complex Length = 967 Back     alignment and structure
>pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase Structure With Trna(Ile) And Mupirocin Length = 917 Back     alignment and structure
>pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna Synthetase Complexed With Trna(Val) And Valyl-Adenylate Analogue Length = 862 Back     alignment and structure
>pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna Synthetase Complexed With Trna(Val) And Valyl-Adenylate Analogue Length = 862 Back     alignment and structure
>pdb|1JZQ|A Chain A, Isoleucyl-Trna Synthetase Complexed With Isoleucyl- Adenylate Analogue Length = 821 Back     alignment and structure
>pdb|1JZQ|A Chain A, Isoleucyl-Trna Synthetase Complexed With Isoleucyl- Adenylate Analogue Length = 821 Back     alignment and structure
>pdb|2CSX|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna Synthetase Complexed With Trna(Met) Length = 497 Back     alignment and structure
>pdb|4DLP|A Chain A, Crystal Structure Of Methionyl-Trna Synthetase Metrs From Brucella Melitensis Bound To Selenomethionine Length = 536 Back     alignment and structure
>pdb|2X1L|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Methionyl-Trna Synthetase In Complex With Methionine And Adenosine Length = 524 Back     alignment and structure
>pdb|1WOY|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225f Mutant From Thermus Thermophilus Length = 500 Back     alignment and structure
>pdb|1A8H|A Chain A, Methionyl-Trna Synthetase From Thermus Thermophilus Length = 500 Back     alignment and structure
>pdb|2D54|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225a Mutant From Thermus Thermophilus Length = 502 Back     alignment and structure
>pdb|3KFL|A Chain A, Leishmania Major Methionyl-Trna Synthetase In Complex With Methionyladenylate And Pyrophosphate Length = 564 Back     alignment and structure
>pdb|1F4L|A Chain A, Crystal Structure Of The E.Coli Methionyl-Trna Synthetase Complexed With Methionine Length = 551 Back     alignment and structure
>pdb|1P7P|A Chain A, Methionyl-trna Synthetase From Escherichia Coli Complexed With Methionine Phosphonate Length = 551 Back     alignment and structure
>pdb|1QQT|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Length = 551 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query952
2v0c_A878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 0.0
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 0.0
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 1e-161
1wz2_A967 Leucyl-tRNA synthetase; ligase, riken structural g 1e-148
3o0a_A219 Leucyl-tRNA synthetase subunit alpha; CP1 hydrolyt 1e-99
2ajg_A196 Leucyl-tRNA synthetase; editing domain, ligase; 2. 2e-96
1ffy_A917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 9e-26
1ffy_A917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 6e-10
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 1e-24
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 2e-24
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 3e-04
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 1e-24
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 1e-15
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 1e-06
1rqg_A722 Methionyl-tRNA synthetase; translation, dimerizati 1e-22
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 5e-09
3pz6_A311 Leurs, leucyl-tRNA synthetase; editing domain, gll 2e-21
3tun_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 7e-19
3tun_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 3e-09
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 4e-18
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 3e-11
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 1e-17
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 1e-05
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 3e-17
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 5e-11
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 3e-17
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 2e-10
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 1e-16
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 3e-10
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 8e-16
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 1e-11
2wfd_A252 Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRN 8e-12
2wfg_A261 Cytosolic leucyl-tRNA synthetase; ligase, editing 2e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1wka_A147 Valyl-tRNA synthetase; editing, CP1, fidelity, the 5e-07
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Length = 878 Back     alignment and structure
 Score = 1370 bits (3549), Expect = 0.0
 Identities = 387/888 (43%), Positives = 526/888 (59%), Gaps = 26/888 (2%)

Query: 64  YPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDI 123
           Y  H IE KWQ +WE     +   ++   + K YVL MFPYPSG  LH+GH   YT  D+
Sbjct: 4   YNPHAIEAKWQRFWEEKGFMKAK-DLPGGRGKQYVLVMFPYPSG-DLHMGHLKNYTMGDV 61

Query: 124 LARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDW 183
           LAR +RMQGY VLHPMGWDAFGLPAE  A++ G HPK  T  NI + +  L+ +G  YDW
Sbjct: 62  LARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVHPKDWTYANIRQAKESLRLMGILYDW 121

Query: 184 NREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSER-GG 242
           +RE++T EP YY+W QWIFL++ ++GLAY+A+  VNWCP   TVLANE+VV+G   R   
Sbjct: 122 DREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHED 181

Query: 243 HPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDG 302
            PV ++ + QW L+IT YA+RLL DL+ L+WPE VK MQR WIGRSEGAE+ F V   + 
Sbjct: 182 TPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGRSEGAEILFPVEGKEV 241

Query: 303 QERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERT 362
                +I V+TTRPDT+FGAT+LV+APEHPL   L +  + + +  Y   A RK+++ER 
Sbjct: 242 -----RIPVFTTRPDTLFGATFLVLAPEHPLTLELAAPEKREEVLAYVEAAKRKTEIERQ 296

Query: 363 ELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDI 422
              +EKTGVF G YA NPA+GE IPIW ADYVL  YGTGAIMAVPAHD RD+EFA KF +
Sbjct: 297 AEGREKTGVFLGAYALNPATGERIPIWTADYVLFGYGTGAIMAVPAHDQRDYEFARKFGL 356

Query: 423 SIHSVVMPDDESSSQ-SEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGN 481
            I  V+    E   +  E+AY   G++VNS         +G   +E   KVI W E+ G 
Sbjct: 357 PIKKVIERPGEPLPEPLERAYEEPGIMVNSGPF------DGTESEEGKRKVIAWLEEKGL 410

Query: 482 GKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTP-TGTG 540
           GK +V Y+LRDWL +RQRYWG PIP+V  +     VP+ E ELP+ LP+L D       G
Sbjct: 411 GKGRVTYRLRDWLISRQRYWGTPIPMVHCE-ACGVVPVPEEELPVLLPDLKDVEDIRPKG 469

Query: 541 EPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSKELVDKTKERYW 600
           + PL     + +TT    G PA+R+T TM  +  S WYYLR+ DP N +   D  K   W
Sbjct: 470 KSPLEAHPEFYETTCPKCGGPAKRDTDTMDTFFDSSWYYLRYTDPHNDRLPFDPEKANAW 529

Query: 601 SPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDV 660
            PVD Y+GG EHAVLHLLY+RF+ K L+D+G+V  +EPF+ +  QG++L    +   +  
Sbjct: 530 MPVDQYIGGVEHAVLHLLYSRFFTKFLHDLGMVKVEEPFQGLFTQGMVLAWTDFGPVEVE 589

Query: 661 DGSYISADSTDTLGEYEQESIPEEKVMKSGDFFVMKDNPNIRLIARAHKMSKSRGNVVNP 720
                  + T    E  + ++  E V K G      ++  +  + +   MSKS+GN V  
Sbjct: 590 GSVVRLPEPTRIRLEIPESALSLEDVRKMGAELRPHEDGTL-HLWKPAVMSKSKGNGVMV 648

Query: 721 DDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVGSSLPDGTFKGG 780
              V E GAD  R+  +F  P  +   W   G++G  RFL R++R +           G 
Sbjct: 649 GPFVKEQGADIARITILFAAPPENEMVWTEEGVQGAWRFLNRIYRRVAEDREALLETSGV 708

Query: 781 TVVNDEEPTLEQL-CTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKWEKH------P 833
                 E    +L   LH+ + KVTE++E  RFNT I+A+MEF+NA Y++ K        
Sbjct: 709 FQAEALEGKDRELYGKLHETLKKVTEDLEALRFNTAIAALMEFLNALYEYRKDRPVTPVY 768

Query: 834 RKIIEPFILLLAPYAPHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKT 893
           R  I  ++ +L P+APH++EELW      +SL    +P+ +   L+   + + +Q+NG  
Sbjct: 769 RTAIRYYLQMLFPFAPHLAEELWHWFWP-DSLFEAGWPELDEKALEKDVVEVAVQVNGAV 827

Query: 894 RGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSIKKRIYVPGRILNVI 941
            GTI + +    E A   A     +   L+GK + K IYVPG+ILN++
Sbjct: 828 AGTIHIPKDAPLEVARAEALKVRNVRAHLEGKEVVKEIYVPGKILNLV 875
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Length = 880 Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Length = 810 Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Length = 967 Back     alignment and structure
>3o0a_A Leucyl-tRNA synthetase subunit alpha; CP1 hydrolytic DOM ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide- protein biosynthesis; 1.77A {Aquifex aeolicus} PDB: 3pz0_A 3pz5_A Length = 219 Back     alignment and structure
>2ajg_A Leucyl-tRNA synthetase; editing domain, ligase; 2.00A {Escherichia coli} PDB: 2ajh_A 2aji_A Length = 196 Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Length = 917 Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Length = 917 Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Length = 821 Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Length = 821 Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Length = 821 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Length = 722 Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Length = 722 Back     alignment and structure
>3pz6_A Leurs, leucyl-tRNA synthetase; editing domain, glleurs_CP1, ligase; 2.60A {Giardia intestinalis} Length = 311 Back     alignment and structure
>3tun_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, translation, nucleotide binding; HET: C13; 2.55A {Trypanosoma brucei} Length = 542 Back     alignment and structure
>3tun_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, translation, nucleotide binding; HET: C13; 2.55A {Trypanosoma brucei} Length = 542 Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Length = 500 Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Length = 500 Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Length = 560 Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Length = 560 Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Length = 497 Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Length = 497 Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Length = 536 Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Length = 536 Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Length = 524 Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Length = 524 Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Length = 564 Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Length = 564 Back     alignment and structure
>2wfd_A Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRNA synthetase, phosphoprotein, editing domain, nucleotide-binding, hydrolysis of MIS-charged trnas; 3.25A {Homo sapiens} Length = 252 Back     alignment and structure
>2wfg_A Cytosolic leucyl-tRNA synthetase; ligase, editing domain, hydrolysis of MIS-charged trnas, benzoxaborole, anti-fungal; HET: ZZB; 2.20A {Candida albicans} PDB: 2wfe_A* Length = 261 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1wka_A Valyl-tRNA synthetase; editing, CP1, fidelity, thermus thrmophilus, translation, amino acid, structural genomics; 1.70A {Thermus thermophilus} SCOP: b.51.1.1 PDB: 1wk9_A* Length = 147 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query952
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 100.0
2v0c_A878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 100.0
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 100.0
1ffy_A917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 100.0
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 100.0
1wz2_A967 Leucyl-tRNA synthetase; ligase, riken structural g 100.0
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 100.0
3u1f_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 100.0
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 100.0
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 100.0
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 100.0
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 100.0
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 100.0
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 100.0
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 100.0
3c8z_A414 Cysteinyl-tRNA synthetase; cysteine ligase, rossma 100.0
3sp1_A501 Cysteinyl-tRNA synthetase; structural genomics, se 100.0
3tqo_A462 Cysteinyl-tRNA synthetase; protein synthesis, liga 100.0
1li5_A461 Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys 100.0
3o0a_A219 Leucyl-tRNA synthetase subunit alpha; CP1 hydrolyt 100.0
2ajg_A196 Leucyl-tRNA synthetase; editing domain, ligase; 2. 100.0
1wny_A186 Isoleucyl-tRNA synthetase; ligase, structural geno 99.97
1wka_A147 Valyl-tRNA synthetase; editing, CP1, fidelity, the 99.97
2wfd_A252 Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRN 99.95
2wfg_A261 Cytosolic leucyl-tRNA synthetase; ligase, editing 99.95
3pz6_A311 Leurs, leucyl-tRNA synthetase; editing domain, gll 99.93
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 99.88
1irx_A523 Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin 99.88
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 99.88
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 99.86
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 99.6
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 97.96
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 97.95
1qtq_A553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 97.91
2hz7_A851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 97.72
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 97.68
3al0_C592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 97.61
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 97.61
4g6z_A490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 97.47
3afh_A488 Glutamyl-tRNA synthetase 2; protein-substrate comp 97.18
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 97.06
2ja2_A498 Glutamyl-tRNA synthetase; non-discriminating gluta 96.79
4gri_A512 Glutamate--tRNA ligase; structural genomics, seatt 96.75
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 96.43
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 96.26
1qtq_A553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 93.51
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 93.45
2yxn_A322 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 92.91
1y42_X392 Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tR 92.67
2ts1_A419 Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30 92.18
1jil_A420 Tyrrs, tyrosyl-tRNA synthetase; truncation, based 92.15
2g36_A340 Tryptophanyl-tRNA synthetase; TM0492, structural g 91.88
2jan_A432 Tyrosyl-tRNA synthetase; protein biosynthesis, ami 91.8
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 91.8
2pid_A356 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 91.71
1h3f_A432 Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA sy 91.62
2el7_A337 Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synth 90.97
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 90.06
1n3l_A372 Tyrosyl-tRNA synthetase; rossmann fold AS catalyti 89.93
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 89.6
2zp1_A314 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 89.46
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 89.3
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 88.71
1ffy_A917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 88.57
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 88.55
1yi8_B351 Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2. 87.96
2yy5_A348 Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synt 87.76
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 87.73
3vgj_A373 Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; 86.91
2dlc_X394 Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligas 86.76
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 86.2
1i6k_A328 TRPRS, tryptophanyl-tRNA synthetase; class I tRNA 85.79
3hv0_A393 Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-bin 85.64
3i05_A395 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP 85.59
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 85.45
3al0_C592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 84.36
1wz2_A967 Leucyl-tRNA synthetase; ligase, riken structural g 84.18
3hzr_A386 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, str 83.96
2ja2_A498 Glutamyl-tRNA synthetase; non-discriminating gluta 83.79
3afh_A488 Glutamyl-tRNA synthetase 2; protein-substrate comp 83.66
2ip1_A432 Tryptophanyl-tRNA synthetase; rossmann fold, struc 83.64
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 82.77
3jxe_A392 Tryptophanyl-tRNA synthetase; adenosine triphospha 82.68
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 82.51
3a04_A372 Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tR 82.2
2cyc_A375 Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacy 81.93
2zp1_A314 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 81.81
3jxe_A392 Tryptophanyl-tRNA synthetase; adenosine triphospha 81.41
1r6t_A477 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 81.31
1r6u_A437 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 81.21
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure
Probab=100.00  E-value=5e-188  Score=1716.12  Aligned_cols=848  Identities=41%  Similarity=0.745  Sum_probs=720.4

Q ss_pred             cccCCChhhhhHHHHHHHHHcCCCCCCCCCCCCCCcEEEEcCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCcccccc
Q 002217           60 VKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPM  139 (952)
Q Consensus        60 ~~~~y~~~~iE~k~~~~W~~~~~f~~~~~~~~~k~kf~i~~~~Pypng~~lHiGH~~~~~~~Di~~Ry~r~~G~~V~~~~  139 (952)
                      +.+.|||.++|++||++|+++++|++..  +.++++||+++|||||||. |||||+++++++|+++||+||+||+|++++
T Consensus        21 m~~~y~~~~iE~kw~~~W~~~~~f~~~~--~~~~~~~~v~~~~PypnG~-lHiGHa~~~~~~DvlaRy~rm~G~~V~~~~   97 (880)
T 4arc_A           21 MQEQYRPEEIESKVQLHWDEKRTFEVTE--DESKEKYYCLSMLPYPSGR-LHMGHVRNYTIGDVIARYQRMLGKNVLQPI   97 (880)
T ss_dssp             CCSSCCHHHHHHHHHHHHHHTTTTCCCC--CTTSCEEEEEECCCCCCSS-CCHHHHHHHHHHHHHHHHHHHTTCEEECCC
T ss_pred             ccccCChHHHHHHHHHHHHhcCCcccCC--cCCCCCEEEEcCCCCCCCC-cchhhhHHHHHHHHHHHHHHHcCCceEEec
Confidence            5578999999999999999999999763  4578999999999999998 999999999999999999999999999999


Q ss_pred             cccccChHHHHHHHHhCCCchHHHHHHHHHHHHHHHHcCCccccCCcccCCChhHHHHHHHHHHHHHHCCceeeeccccc
Q 002217          140 GWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVN  219 (952)
Q Consensus       140 G~D~~Glpie~~a~~~g~~~~~~~~~~~~~~~~~l~~lgi~~Dw~~~~~T~~~~~~~~v~~~f~~L~~kGliy~~~~~v~  219 (952)
                      ||||||+|||++|++.|++|++++.++++.|++||++||+++||+++++|+||.|+++++|+|.+|+++|+||++.++|+
T Consensus        98 G~D~~Glpie~~a~~~g~~p~~~~~~~i~~~~~~l~~LGis~Dw~~~~~T~d~~~~~~v~~~f~~L~ekGliY~~~~~v~  177 (880)
T 4arc_A           98 GWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVN  177 (880)
T ss_dssp             EECCCSTHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHTTCCCCGGGCEETTSHHHHHHHHHHHHHHHHTTCEEEEEECC-
T ss_pred             CccccCcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhCCCcCCCCCEEcCCHHHHHHHHHHHHHHHHCCCEEEeceeEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccCchhhccCccccCCCCeEEeeccccchhhhhhhhHhhccCCCC-CCchHHHHHHHhhhccCCCceEEEEEe
Q 002217          220 WCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDL-DWPESVKEMQRNWIGRSEGAEMDFRVL  298 (952)
Q Consensus       220 wc~~~~t~ls~~Ev~~~~~~~~~~~~~~~~~~~~~~~i~~y~~~l~~~l~~~-~~p~~~~~~~~~~i~~s~~~~v~f~~~  298 (952)
                      |||.|+|+||++||++|+|++||.+|++++++||||+|++|+++|+++|+.+ .||+.++.||+||||+|+|++|+|++.
T Consensus       178 wcp~~~t~La~~ev~~g~~~~~g~~ve~~~~~~~f~~i~~y~~~Ll~~l~~~~~wp~~v~~~~~~wig~s~g~~v~f~~~  257 (880)
T 4arc_A          178 WCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKTMQRNWIGRSEGVEITFNVN  257 (880)
T ss_dssp             -----------------------------CEEEEEECGGGGHHHHHHHGGGCTTSCHHHHHHHHHHHCEEEEEEEEEEET
T ss_pred             ecCCcCCEecchhhhcCcCcCCCCccEEEEccceEEeechhHHHHHHHHhhcccccHHHHHHHHhhhccccceEEEEEec
Confidence            9999999999999999999999999999999999999999999999999988 499999999999999999999999995


Q ss_pred             cCCCCccCcEEEEecCCcchhccccEEEECCCCccchhhccccchHHHHHHHHHHhccchhhHhhhhhcccccccceEEe
Q 002217          299 DSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTGVFSGCYAR  378 (952)
Q Consensus       299 ~~~~~~~~~~i~i~TT~P~Tl~g~~~v~v~p~~~y~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~g~~~~  378 (952)
                      +.     +.+|+|||||||||||++||+|||+|+|+..++..+  ..+++|++.+...+..++.....++.|.++|.++.
T Consensus       258 ~~-----~~~i~v~TTrP~Tl~g~t~vav~Pe~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~  330 (880)
T 4arc_A          258 DY-----DNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENN--PELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAV  330 (880)
T ss_dssp             TC-----SSEEEEEESCGGGGGGCCEEEECTTCHHHHHHGGGC--HHHHHHHTC----------------CEEEEEEEEE
T ss_pred             CC-----CceEEEEeCCchhhcCCeEEEECCCcHHHHHHhcCh--HHHHHHHHHHhccCchhhhhccceeeccccCcEEe
Confidence            32     368999999999999999999999999998876432  44667776555544444444445788999999999


Q ss_pred             cCCCCCcccEEecCcccCCCCCCceEecCCCChhhHHHHHHcCCceeeeecCCCCCC-ccccccccccceEEcccCcccc
Q 002217          379 NPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESS-SQSEKAYTGEGLIVNSSNLISG  457 (952)
Q Consensus       379 ~P~~~~~~pv~~~~~V~~~~GTG~V~~~Pah~~~D~~~~~~~~L~i~~vv~~~~~~~-~~~~~~y~~~g~l~~~~~~~~~  457 (952)
                      ||++|+++|||++|||++++|||+||+|||||++||+||++||||+++||++.++.. ....++|+++|+|+|+.     
T Consensus       331 ~P~~~~~ipi~~~~yV~~~~GTGaV~~~Pahd~~D~~~~~~~~Lpi~~vi~~~~~~~~~~~~~~~~~~g~~~ns~-----  405 (880)
T 4arc_A          331 HPLTGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSG-----  405 (880)
T ss_dssp             CTTTCCEEEEEEETTSCSSSTTSEEEECTTTCHHHHHHHHHHTCCCCCCBCCTTSCCCCCSSSCCCSCCCBCSSG-----
T ss_pred             cCCCCCEeEEEEeCccccCCCCceEEEccCCCHHHHHHHHHcCCCceEeeccCcccccccccccccCCceeecCc-----
Confidence            999999999999999999999999999999999999999999999999998753321 12356899999998875     


Q ss_pred             cccCCCCHHHHHHHHHHHHHHcCCCcceecccCCceeecccCCCCcccCceEeCCCCceeecCCCCcCCCCCcccccCCC
Q 002217          458 LDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPT  537 (952)
Q Consensus       458 ~~~~gl~~~~a~~~ii~~l~~~~~~~~~~~~~l~DW~ISRQR~WG~PIPv~~~~~~~~~~~~~~~~l~v~lp~~~~~~~~  537 (952)
                       .++||...+|+++|+++|++.|.+.+.++|++||||||||||||+|||||||++|| .+++++++||+.||+.  +.+.
T Consensus       406 -~~~Gl~~~eA~~~ii~~L~~~g~~~~~v~yrlrDW~iSRQRyWG~PIPi~~c~~cg-~v~v~~~~Lpv~lp~~--~~~~  481 (880)
T 4arc_A          406 -EFNGLDHEAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGT-VMPTPDDQLPVILPED--VVMD  481 (880)
T ss_dssp             -GGTTCCHHHHHHHHHHHHHHTTSEEEEEEESCCCEECEESCSSSCBCCEEEETTSC-EEECCGGGCSCCCCSS--CCCC
T ss_pred             -ccCCCCHHHHHHHHHHHHHHcCCcceeEEEEcccceeeeeeccCCcceEEEECCCC-eEeCChHHCccccchh--cccC
Confidence             49999999999999999999999999999999999999999999999999998775 6788999999999983  4455


Q ss_pred             CCCCCCCccccccccccccCCCCCccccCCCccccccccchhheecCCCCchhHhhhhhhhcCCCceeEecCchhhHHHH
Q 002217          538 GTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSKELVDKTKERYWSPVDVYVGGAEHAVLHL  617 (952)
Q Consensus       538 G~~~~~l~~~~~w~~~~~~~~g~~~~re~d~lD~WfdSswy~~~~~~p~~~~~~~~~~~~~~w~PvDlyv~G~D~~~~HL  617 (952)
                      |.| +||..+.+|+++.||  |++++||||||||||||||||+||++|++++.+++++..+||||+|+|+||+||+++||
T Consensus       482 ~~g-~pl~~~~~w~~~~cp--g~~~~retDtmDtw~dSswy~~r~~~p~~~~~~~~~~~~~~~~PvD~yigG~EHailHl  558 (880)
T 4arc_A          482 GIT-SPIKADPEWAKTTVN--GMPALRETDTFDTFMESSWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHL  558 (880)
T ss_dssp             SSS-CHHHHSTTTTEEESS--SSEEEECCCEECTTTGGGTHHHHTTSTTCCSSSCCHHHHHHHCSEEEEECCGGGTTTHH
T ss_pred             CCC-CchHhCccceeeccC--CCcceeCCCcCCCcccCcHHHHhhcCCCccccccChHHHhccCCceEeecchhhHHHHH
Confidence            555 799999999999998  88999999999999999999999999999888898888899999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcCCCCcchhhhhhceeccccceeEEecCCCc--cccCCCCCcccccccccCccccccccCCceee
Q 002217          618 LYARFWHKVLYDIGVVSTKEPFKCVINQGIILGEMQYMVCKDVDGS--YISADSTDTLGEYEQESIPEEKVMKSGDFFVM  695 (952)
Q Consensus       618 ly~Rfw~~~L~~~~~~~~~~PFk~l~~~G~vl~~~~y~~~~d~~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vl  695 (952)
                      +|+||||++|+++|++.+++||++|++||||+++++|  .+|++|+  |+++++++.........+           ..+
T Consensus       559 lyaRf~~~~L~~~g~~~~~ePFk~ll~qGmVl~~~~~--~~d~~G~~~~~~~~~v~~~~~~~~~~~-----------~~~  625 (880)
T 4arc_A          559 LYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFY--YVGENGERNWVSPVDAIVERDEKGRIV-----------KAK  625 (880)
T ss_dssp             HHHHHHHHHHHHTTSCCCSCSEEEEECCCCEEEEEEE--EECTTSCEEEECSTTCEEEECTTCCEE-----------EEE
T ss_pred             HHHHHHHHHHHHhhcccCCCChHHeEEeceEeeccee--ccccCCcccccCHHHhccccccccccc-----------ccc
Confidence            9999999999999999999999999999999988643  2688887  999998875432111100           011


Q ss_pred             ccCcchhhcccccccccCCCCCCChhhHHhhhCchhhhhhhhhcCCCCCCCCCChhhHHHHHHHHHHHHHHHhccCCCCC
Q 002217          696 KDNPNIRLIARAHKMSKSRGNVVNPDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLGRMWRLIVGSSLPDG  775 (952)
Q Consensus       696 ~~~~~~~v~~~g~KMSKSkGNvV~P~eii~~YGaDalRl~ll~~~~~~~~~~~s~~~i~~~~r~l~~l~~~~~~~~~~~~  775 (952)
                      ..++...+....+|||||+||+|+|.++|++||||++|||+|++++++++++|+++++++++||++|+|+++...... .
T Consensus       626 ~~~G~~v~~~~~eKMSKSkGNvVdP~diIekYGADalRl~ll~~~~~~~dl~~s~~~ie~a~rfl~rlwn~~~~~~~~-~  704 (880)
T 4arc_A          626 DAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTAK-G  704 (880)
T ss_dssp             CTTCCBCEEEEEEECCTTTTCCCCHHHHHHHHCHHHHHHHHHHSSCTTSCEECCHHHHHHHHHHHHHHHHHHHHHHHT-C
T ss_pred             ccCCccccccccccccCcCCCCCCHHHHHHHcCchHHHHHHHhcCCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHhc-c
Confidence            233333334456799999999999999999999999999999999999999999999999999999999987432100 0


Q ss_pred             CCCCCccCCCCCChHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHHHHHhcccc-------hhHHHHHHHHHHhCCc
Q 002217          776 TFKGGTVVNDEEPTLEQLCTLHKCIAKVTEEIE-GTRFNTGISAMMEFINAAYKWEK-------HPRKIIEPFILLLAPY  847 (952)
Q Consensus       776 ~~~~~~~~~~~~~d~~~l~~l~~~i~~v~~~~e-~~~f~~ai~~l~~f~~~~~~~~~-------~~~~vL~~l~~LLaPf  847 (952)
                      .............|+|+++++++++++|+++|+ +|+|++|++++|+|++.++++..       .++++|+.+++||+||
T Consensus       705 ~~~~~~~~~l~~~D~~ll~~l~~~i~~V~~a~ed~~~fntAi~~l~efvn~l~k~~~~~~~~~~~l~~~l~~ll~LLaPf  784 (880)
T 4arc_A          705 DVAALNVDALTENQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAPTDGEQDRALMQEALLAVVRMLNPF  784 (880)
T ss_dssp             CCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSCCSSHHHHHHHHHHHHHHHHHHTTT
T ss_pred             cccccccccCCHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHhhc
Confidence            000000111234588999999999999999998 79999999999999999988632       4578999999999999


Q ss_pred             chhHHHHHHHHcCCCCCccccCCCCCCccccCCCceEEeEEEeceeEEEEEecCCCCHHHHHHHHccCHHHHhhhCCCCe
Q 002217          848 APHMSEELWFRLGHSNSLAYESFPKANPDYLKDSTIVLPIQINGKTRGTIQVEEGCSEEEAFKLASLDEKLSKFLDGKSI  927 (952)
Q Consensus       848 ~P~iaEElw~~L~~~~sV~~~~WP~~~~~~l~~~~i~l~vqVngk~r~~i~v~~~~s~e~~~~~~~~~~~~~~~l~gk~i  927 (952)
                      |||+|||||+.|+..+||+.++||+++++++.+++++++||||||+|+.++|++++++++++++++++++++++|+||+|
T Consensus       785 ~PhiaEElW~~Lg~~~sv~~~~wP~~d~~~l~~~~~~~~vqvngk~r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  864 (880)
T 4arc_A          785 TPHICFTLWQELKGEGDIDNAPWPVADEKAMVEDSTLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTV  864 (880)
T ss_dssp             SHHHHHHHHHHTTCSSCGGGSCCCCCCHHHHCCSEEEEEEEETTEEEEEEEEETTCCHHHHHHHHHHCHHHHTTTTTCCC
T ss_pred             cHHHHHHHHHHcCCCCeEEeCCCCCCCHHHhccCceEEEEEEecceEEEEEcCCCCCHHHHHHHHhcCHHHHHHhCCCCc
Confidence            99999999999999899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCcEEEEEec
Q 002217          928 KKRIYVPGRILNVILD  943 (952)
Q Consensus       928 ~kvi~vp~kiin~v~~  943 (952)
                      +|+|+|||||||||++
T Consensus       865 ~k~i~v~~k~vn~v~~  880 (880)
T 4arc_A          865 RKVIYVPGKLLNLVVG  880 (880)
T ss_dssp             CEEEEETTTEEEEECC
T ss_pred             eEEEEECCCEEEEEeC
Confidence            9999999999999985
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} Back     alignment and structure
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} Back     alignment and structure
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} Back     alignment and structure
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B Back     alignment and structure
>3o0a_A Leucyl-tRNA synthetase subunit alpha; CP1 hydrolytic DOM ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide- protein biosynthesis; 1.77A {Aquifex aeolicus} PDB: 3pz0_A 3pz5_A Back     alignment and structure
>2ajg_A Leucyl-tRNA synthetase; editing domain, ligase; 2.00A {Escherichia coli} PDB: 2ajh_A 2aji_A Back     alignment and structure
>1wny_A Isoleucyl-tRNA synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Thermus thermophilus} PDB: 1wnz_A* 1wk8_A* 1udz_A 1ue0_A Back     alignment and structure
>1wka_A Valyl-tRNA synthetase; editing, CP1, fidelity, thermus thrmophilus, translation, amino acid, structural genomics; 1.70A {Thermus thermophilus} SCOP: b.51.1.1 PDB: 1wk9_A* Back     alignment and structure
>2wfd_A Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRNA synthetase, phosphoprotein, editing domain, nucleotide-binding, hydrolysis of MIS-charged trnas; 3.25A {Homo sapiens} Back     alignment and structure
>2wfg_A Cytosolic leucyl-tRNA synthetase; ligase, editing domain, hydrolysis of MIS-charged trnas, benzoxaborole, anti-fungal; HET: ZZB; 2.20A {Candida albicans} PDB: 2wfe_A* Back     alignment and structure
>3pz6_A Leurs, leucyl-tRNA synthetase; editing domain, glleurs_CP1, ligase; 2.60A {Giardia intestinalis} Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Back     alignment and structure
>1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Back     alignment and structure
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Back     alignment and structure
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Back     alignment and structure
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Back     alignment and structure
>4gri_A Glutamate--tRNA ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, aminoacyl-tRNA synthetase; HET: GLU; 2.60A {Borrelia burgdorferi} Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Back     alignment and structure
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A* Back     alignment and structure
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A Back     alignment and structure
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A Back     alignment and structure
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A* Back     alignment and structure
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima} Back     alignment and structure
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis} Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3m5w_A* Back     alignment and structure
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP-BI ligase, mitochondrion, nucleotide-binding, protein biosynth; HET: YSA; 2.20A {Homo sapiens} PDB: 3zxi_A* Back     alignment and structure
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A* Back     alignment and structure
>2el7_A Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synthetase, translation, structural GEN NPPSFA; 2.50A {Thermus thermophilus} Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A* Back     alignment and structure
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A* Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A* Back     alignment and structure
>2yy5_A Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synthetase, structural genomics, NPPSFA; HET: WSA; 2.55A {Mycoplasma pneumoniae} Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3m5w_A* Back     alignment and structure
>3vgj_A Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; HET: YAP; 2.21A {Plasmodium falciparum} Back     alignment and structure
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Back     alignment and structure
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A 3u1v_A Back     alignment and structure
>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II} SCOP: c.26.1.0 Back     alignment and structure
>3i05_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, LIG nucleotide-binding, protein biosynthesis; 2.80A {Trypanosoma brucei} SCOP: c.26.1.0 Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural GEN pathogenic protozoa, MSGPP, ligase; 3.00A {Entamoeba histolytica} Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Back     alignment and structure
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A* Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Back     alignment and structure
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii} Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Back     alignment and structure
>3a04_A Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding, protein biosynthesis; 1.97A {Aeropyrum pernix} PDB: 3a05_A* Back     alignment and structure
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics; HET: TYR; 2.20A {Pyrococcus horikoshii} Back     alignment and structure
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A* Back     alignment and structure
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii} Back     alignment and structure
>1r6t_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytical domain, recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.10A {Homo sapiens} SCOP: a.16.1.3 c.26.1.1 PDB: 2azx_A* 2quh_A* 2qui_A* 2quj_A* 2quk_A Back     alignment and structure
>1r6u_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytic domain, AN recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.00A {Homo sapiens} SCOP: c.26.1.1 PDB: 1ulh_A 2dr2_A* 2ake_A* 1o5t_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 952
d1h3na3494 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetas 3e-64
d1h3na3494 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetas 5e-54
d1ilea3452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 1e-48
d1ilea3452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 7e-29
d1ivsa4425 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase 1e-47
d1ivsa4425 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase 2e-26
d1pfva2350 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthe 3e-47
d1pfva2350 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthe 8e-07
d1ffya3450 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthe 7e-42
d1ffya3450 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthe 2e-22
d1h3na2192 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS 6e-40
d1rqga2361 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthe 2e-36
d1rqga2361 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthe 3e-08
d2d5ba2348 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR 3e-36
d2d5ba2348 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR 5e-08
d1ffya2194 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (Il 2e-21
d1udza_179 b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {T 9e-15
d1h3na1128 a.27.1.1 (A:687-814) Leucyl-tRNA synthetase (LeuRS 1e-14
d1wkaa1143 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) 2e-10
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 6e-09
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 1e-04
d1li5a2315 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR 1e-07
d1li5a2315 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR 1e-06
d2d5ba1152 a.27.1.1 (A:349-500) Methionyl-tRNA synthetase (Me 0.002
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 494 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Leucyl-tRNA synthetase (LeuRS)
species: Thermus thermophilus [TaxId: 274]

 Score =  222 bits (567), Expect = 3e-64
 Identities = 122/225 (54%), Positives = 155/225 (68%), Gaps = 3/225 (1%)

Query: 64  YPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDI 123
           Y  H IE KWQ +WE     +   ++   + K YVL MFPYPSG  LH+GH   YT  D+
Sbjct: 4   YNPHAIEAKWQRFWEEKGFMK-AKDLPGGRGKQYVLVMFPYPSGD-LHMGHLKNYTMGDV 61

Query: 124 LARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDW 183
           LAR +RMQGY VLHPMGWDAFGLPAE  A++ G HPK  T  NI + +  L+ +G  YDW
Sbjct: 62  LARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVHPKDWTYANIRQAKESLRLMGILYDW 121

Query: 184 NREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGV-SERGG 242
           +RE++T EP YY+W QWIFL++ ++GLAY+A+  VNWCP   TVLANE+VV+G       
Sbjct: 122 DREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHED 181

Query: 243 HPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGR 287
            PV ++ + QW L+IT YA+RLL DL+ L+WPE VK MQR WIGR
Sbjct: 182 TPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGR 226
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 494 Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 425 Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 425 Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 350 Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 350 Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 450 Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 450 Back     information, alignment and structure
>d1h3na2 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 192 Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Length = 361 Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Length = 361 Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 Back     information, alignment and structure
>d1ffya2 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 194 Back     information, alignment and structure
>d1udza_ b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 179 Back     information, alignment and structure
>d1h3na1 a.27.1.1 (A:687-814) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 128 Back     information, alignment and structure
>d1wkaa1 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 143 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 Back     information, alignment and structure
>d2d5ba1 a.27.1.1 (A:349-500) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 152 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query952
d1ffya3450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 100.0
d1h3na3494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 100.0
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 100.0
d1ivsa4425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 100.0
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 100.0
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 100.0
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 100.0
d1h3na2192 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 100.0
d1wkaa1143 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 99.97
d1udza_179 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 99.97
d1ffya2194 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 99.95
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 99.95
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 99.78
d1h3na1128 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 99.74
d1ivsa2218 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 99.52
d1ilea1180 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 99.5
d1ffya1273 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 99.4
d1rqga1210 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 98.9
d2d5ba1152 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 98.67
d1pfva1162 Methionyl-tRNA synthetase (MetRS) {Escherichia col 98.56
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 98.45
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 98.26
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 97.75
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 97.11
d1gtra2331 Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co 97.1
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 96.43
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 95.67
d1jila_323 Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus au 89.5
d1j1ua_306 Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanoc 86.71
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 86.1
d1h3fa1343 Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophi 84.46
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Isoleucyl-tRNA synthetase (IleRS)
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=9.7e-81  Score=724.32  Aligned_cols=421  Identities=26%  Similarity=0.437  Sum_probs=331.1

Q ss_pred             cccccCCChhhhhHHHHHHHHHcCCCCCCCCCCCCCCcEEEEcCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCcccc
Q 002217           58 QVVKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLH  137 (952)
Q Consensus        58 ~~~~~~y~~~~iE~k~~~~W~~~~~f~~~~~~~~~k~kf~i~~~~Pypng~~lHiGH~~~~~~~Di~~Ry~r~~G~~V~~  137 (952)
                      +.++.++|+.++|++||++|+++++|++..+.+.++++|+|++||||+||. |||||+++++++||++||+||+||+|++
T Consensus        12 t~f~~~~~~~~~E~~~~~~W~~~~~~~~~~~~~~~~~~f~~~~~pPy~nG~-lHiGH~~~~~~~Dv~~Ry~rm~G~~V~~   90 (450)
T d1ffya3          12 TDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN-LHMGHALNKILKDFIVRYKTMQGFYAPY   90 (450)
T ss_dssp             CCCCSSCCHHHHHHHHHHHHHHTTHHHHHHHHTTTSCBCCEECCCCBSSSC-CCHHHHHHHHHHHHHHHHHHTTTCBCCC
T ss_pred             CCCCCCCChHHHHHHHHHHHHHCCCccccccccCCCCcEEEecCCCCCCCc-hhhhHHHHHHHHHHHHHHHHhcCCcccc
Confidence            346778999999999999999999998754456678899999999999998 9999999999999999999999999999


Q ss_pred             cccccccChHHHHHHHHhCCCch------------HHHHHHHHHHHHHHHHcCCccccCCcccCCChhHHHHHHHHHHHH
Q 002217          138 PMGWDAFGLPAEQYAIETGTHPK------------ITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQL  205 (952)
Q Consensus       138 ~~G~D~~Glpie~~a~~~g~~~~------------~~~~~~~~~~~~~l~~lgi~~Dw~~~~~T~~~~~~~~v~~~f~~L  205 (952)
                      ++||||||+|||++|++.|..++            +++.++++.+++++++||+++||+++|.|++|+|.+.++++|.+|
T Consensus        91 ~~G~D~~G~pie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~D~~~~~~T~~~~~~~~v~~~f~~l  170 (450)
T d1ffya3          91 VPGWDTHGLPIEQALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEM  170 (450)
T ss_dssp             CCEEBCCSHHHHHHHHHHTCCSTTTCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCTTSCEETTSHHHHHHHHHHHHHH
T ss_pred             ccccccCCcHHHHHHHhhCCccccccHHHHhhhcchhhhhhhhhHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHH
Confidence            99999999999999999886643            457788899999999999999999999999999999999999999


Q ss_pred             HHCCceeeeccccccCCCCCcccCchhhccCccccCCCCeEEeeccccchhhhhhhhHhhccCCCCCCchHHHHHHHhhh
Q 002217          206 LKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWI  285 (952)
Q Consensus       206 ~~kGliy~~~~~v~wc~~~~t~ls~~Ev~~~~~~~~~~~~~~~~~~~~~~~i~~y~~~l~~~l~~~~~p~~~~~~~~~~i  285 (952)
                      +++|+||++.++|+|||.|+|+|+++|++++.|++|+.+++.+..+|||++++.+++.+.+.++...|+.          
T Consensus       171 ~~~G~iy~~~~~v~~~p~~~~~~~~~e~~~~~~~r~~~~~~~~~~~qwf~~~~~~~~~~~~~~~~~~~~~----------  240 (450)
T d1ffya3         171 ADKGLIYKGKKPVYWSPSSESSLAEAEIEYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKV----------  240 (450)
T ss_dssp             HHTTCEEEEEEEEEEETTTTEECCGGGEEEEEETTTCCBCEEEEEEEEEECHHHHHHHHHHHHHTSEESS----------
T ss_pred             HHcCCeeccccccccccccCcccccccccccccccccCCceeeccccceeccccccccchhhcccccccc----------
Confidence            9999999999999999999999999999999999999999999999999999888776654321100000          


Q ss_pred             ccCCCceEEEEEecCCCCccCcEEEEecCCcchhccccEEEECCCCccchhhccccchHHHHHHHHHHhccchhhHhhhh
Q 002217          286 GRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQ  365 (952)
Q Consensus       286 ~~s~~~~v~f~~~~~~~~~~~~~i~i~TT~P~Tl~g~~~v~v~p~~~y~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~  365 (952)
                                                                                                      
T Consensus       241 --------------------------------------------------------------------------------  240 (450)
T d1ffya3         241 --------------------------------------------------------------------------------  240 (450)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hcccccccceEEecCCCCCcccEEecCcccCCCCCCceEecCCCChhhHHHHHHcCCceeeeecCCCCCCcccccccccc
Q 002217          366 KEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGE  445 (952)
Q Consensus       366 ~~~~~~l~g~~~~~P~~~~~~pv~~~~~V~~~~GTG~V~~~Pah~~~D~~~~~~~~L~i~~vv~~~~~~~~~~~~~y~~~  445 (952)
                                                                                                      
T Consensus       241 --------------------------------------------------------------------------------  240 (450)
T d1ffya3         241 --------------------------------------------------------------------------------  240 (450)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceEEcccCcccccccCCCCHHHHHHHHHHHHHHcCCCcceecccCCceeecccCCCCcccCceEeCCCCceeecCCCCcC
Q 002217          446 GLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELP  525 (952)
Q Consensus       446 g~l~~~~~~~~~~~~~gl~~~~a~~~ii~~l~~~~~~~~~~~~~l~DW~ISRQR~WG~PIPv~~~~~~~~~~~~~~~~l~  525 (952)
                                          ......+..|+.           +++||||||||+||+|||+|+|+++ +.+...+...+
T Consensus       241 --------------------~~~~~~~~~~~~-----------~~~Dw~iSRqr~WG~piP~~~~~~~-~~~~~~~~~~~  288 (450)
T d1ffya3         241 --------------------NWGKTRIYNMVR-----------DRGEWVISRQRVWGVPLPVFYAENG-EIIMTKETVNH  288 (450)
T ss_dssp             --------------------HHHHHHHHHHHH-----------HCCCEECEESCSSSCBCCCEECTTS-CEECCHHHHHH
T ss_pred             --------------------cccceeeecccc-----------CccchheeeecccccCcceeecCCC-CEecchhhhHH
Confidence                                000011122222           2679999999999999999999765 33322211100


Q ss_pred             CCCCcccccCCCCCCCC---CCccccccccccccCCCCCccccCCCccccccccchhheecCCCCchhHhhhhhhhcCCC
Q 002217          526 LTLPELDDFTPTGTGEP---PLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCWYYLRFMDPKNSKELVDKTKERYWSP  602 (952)
Q Consensus       526 v~lp~~~~~~~~G~~~~---~l~~~~~w~~~~~~~~g~~~~re~d~lD~WfdSswy~~~~~~p~~~~~~~~~~~~~~w~P  602 (952)
                      +.    +.+...|....   +......|....|..+++.+.|++|+||+||+|++++.......          ...+||
T Consensus       289 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvld~wfds~~~~~~~~~~~----------~~~~~P  354 (450)
T d1ffya3         289 VA----DLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLETR----------PELSFP  354 (450)
T ss_dssp             HH----HHHHHHCTHHHHHSCHHHHSSTTCCCSSCTTSCCEECCCEECHHHHHHTHHHHTTTTS----------TTCCSS
T ss_pred             HH----HhhhhcCccccccccccccccccccccCCCCCcceeeeeeeccccccccccccccccc----------ccccCC
Confidence            00    00000011000   00000111112344567789999999999999986544322111          134689


Q ss_pred             ceeEecCchhhHHHHHHHHHHHHHHHHhc-CcCCCCcchhhhhhceeccccceeEEecCCCccccCCCCCcccccccccC
Q 002217          603 VDVYVGGAEHAVLHLLYARFWHKVLYDIG-VVSTKEPFKCVINQGIILGEMQYMVCKDVDGSYISADSTDTLGEYEQESI  681 (952)
Q Consensus       603 vDlyv~G~D~~~~HLly~Rfw~~~L~~~~-~~~~~~PFk~l~~~G~vl~~~~y~~~~d~~g~~~~~~~~~~~~~~~~~~~  681 (952)
                      +|++++|+||+       |||+..++..+ ++.+.+||++|++||||++.                              
T Consensus       355 ~d~~~~G~Di~-------r~w~~~~~~~~~~~~~~~Pfk~v~~hG~vld~------------------------------  397 (450)
T d1ffya3         355 ADMYLEGSDQY-------RGWFNSSITTSVATRGVSPYKFLLSHGFVMDG------------------------------  397 (450)
T ss_dssp             BSEEEEEGGGG-------TTHHHHHHHHHHHHHSSCSBSEEEEECCEECT------------------------------
T ss_pred             CcccccCcchh-------hHHHHHHHHHHHHhcCCCCcceEEEcceEECC------------------------------
Confidence            99999999996       89876554444 45678999999999999864                              


Q ss_pred             ccccccccCCceeeccCcchhhcccccccccCCCCCCChhhHHhhhCchhhhhhhhhcCCCCCCCCCChhhHHHHH
Q 002217          682 PEEKVMKSGDFFVMKDNPNIRLIARAHKMSKSRGNVVNPDDVVTEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVH  757 (952)
Q Consensus       682 ~~~~v~~~~~~~vl~~~~~~~v~~~g~KMSKSkGNvV~P~eii~~YGaDalRl~ll~~~~~~~~~~~s~~~i~~~~  757 (952)
                                              +|+|||||+||+|+|.++|++||||+||||+++ +++.+|.+|+++.++++.
T Consensus       398 ------------------------~G~KMSKS~GN~I~p~dii~~yGaDalR~~l~s-~~~~~D~~fs~~~l~~~~  448 (450)
T d1ffya3         398 ------------------------EGKKMSKSLGNVIVPDQVVKQKGADIARLWVSS-TDYLADVRISDEILKQTS  448 (450)
T ss_dssp             ------------------------TSCCCCSSSSCCCCHHHHHHHTCHHHHHHHHHT-SCTTSCEECCHHHHHHHH
T ss_pred             ------------------------CCCCCCCCCCCCcCHHHHHHHhCcHHHHHHHHc-CCCCCCcCcCHHHHHHhh
Confidence                                    389999999999999999999999999999985 567889999999888764
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3na2 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1wkaa1 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1udza_ b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya2 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1h3na1 a.27.1.1 (A:687-814) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ivsa2 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ilea1 a.27.1.1 (A:642-821) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya1 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1rqga1 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2d5ba1 a.27.1.1 (A:349-500) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pfva1 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure