Citrus Sinensis ID: 002218

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950--

MENGGLSVVAVRKMKLTPKAIIVQKFGRNAQFTVDEVQDVVQNGCPGLAIPQKGPCLYRCSLQLPEFSVVSETFKKKKDAEQSAAEKALEKLGIDPSPNVPSAEEAWDKLIASVKHLFSNEFLSSQSPLRGHFIAALRRDGDLYGSVPASVIAVCDSKLANLCKLINPKVESSHLLVLTYIMRAATRLSEFVVTSEGQLSIWRKDPYPPEIKESSIIQQSESPDSICIEAIHIPSSLEMAVHPVTLNVSSTGYYLDVIARNLDQTDGNKILVSSRTIGKASSEMRLYFAAPKSYLLDLSSDLPNVEEVVDFEGSLNPRASYLYGQDIYGDAILASIGYTRKSEGLFHEDITLQSYYRMLIHLTPSGVYKLSREAILTAELPMAFTTRTNWRGSFPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKSRDPILECSPKEFYKKQNESIENASLKVLSWLNAYFKDPDIPLEKLNNLVGALDIQCYPQNFFKKFSSYRFIHNVQQRKMGEKLLQANSINTLNAIPEHGIYCLSIGGPDSGIYPSNGCLSFISYSVSLVIEGETMKELLESREEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELILAAADDSARTFSLLSSRACCLEYHITLLRVTEPPEDRMEQALFSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQSCKFRNHDHKFEWTRDQFNCWATELAARHNYSVEFSGVGGSGDREPGFASQIAVFRSRTPPEEDDLLKDGDSAHHYKVIWEWDGNGLSRSSL

cccccccccccccccccHHHHHHHHccccCEEEEEEEcccccccccccccccccccEEEEEEcccccEEEccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHcccccccccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHccccEEEccccCEEEccccccHHHHHHHHHHcccccccEEEEEEEEcccccccCEEEEEEEccccccHHHHHHHccccccccEEEEEcccccccccEEEEEEcccccHHccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccHHHHHHHHHcccccccccccHHHHHHHccccccccccccccccHHHHHHHHHHHccccccEEcccccccccccccccHHHHHcccccccccccccccccccccccEEEEEEEEEccccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccCEEccHHHHHHHcccEEHHcccccccccccccccccccccccccccEEEEcccccccccccccccEEEEEEEEEEEEccccEEEEEcccccEEEEEccccccccHHHHEEEEcccccEEEcccccccccccccccccHHHHHHHHcccccHHHHHHHHccccccHHHHHHccccccHHHHHHHHHHHHHHHcccccEEEECccccccHHHHHcccccccEEEcccccHHHHHHHHHHHHHHHccccccccccccccEEEEEcccccccccccccccEEEHHHHHHcccHHHHHHHHHHHHHcccccEEEEEccccccHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEccccccccccccccEEEEEEEccccccccccccccccccEEEEEECcccccccccc

******SVVAVRKMKLTPKAIIVQKFGRNAQFTVDEVQDVVQNGCPGLAIPQKGPCLYRCSLQLPEFSVVSETFKK**********KALEKLGIDPSPNVPSAEEAWDKLIASVKHLFSNEFLSSQSPLRGHFIAALRRDGDLYGSVPASVIAVCDSKLANLCKLINPKVESSHLLVLTYIMRAATRLSEFVVTSEGQLSIWRKDPY*PEIK*S*******SPDSICIEAIHIPSSLEMAVHPVTLNVSSTGYYLDVIARNLDQTDGNKILVSSRTIGKASSEMRLYFAAPKSYLLDLSSDLPNVEEVVDFEGSLNPRASYLYGQDIYGDAILASIGYTRKSEGLFHEDITLQSYYRMLIHLTPSGVYKLSREAILTAELPMAFTTRTNWRGSFPREMLFMFCRQHWLSEPVFSTCSN**************************************VRCEVKIFSKSRDPILECSPKEFYKKQNESIENASLKVLSWLNAYFKDPDIPLEKLNNLVGALDIQCYPQNFFKKFSSYRFIHNVQQRKMGEKLLQANSINTLNAIPEHGIYCLSIGGPDSGIYPSNGCLSFISYSVSLVIEGETMKELLESREEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELILAAADDSARTFSLLSSRACCLEYHITLLRVT*******E*ALFSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNYEYNAILQKSS************QLQSCKFRNHDHKFEWTRDQFNCWATELAARHNYSVEFSGVGGSGDREPGFASQIAVFRSR**************AHHYKVIWEWDG********

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Small RNA 2'-O-methyltransferase	Methyltransferase that adds a methyl group to the ribose of the last nucleotide of small RNAs (sRNAs). This protects the 3'-end of sRNAs from uridylation activity and subsequent degradation. Can methylates 3'-end of microRNAs (miRNAs), small interfering RNAs (siRNas) and trans-acting small interfering RNAs (ta-siRNAs). Involved in plant development through its role in small RNAs processing. Required for the specification of reproductive organ identities and the probable repression of A class genes. May control floral determinacy possibly by regulating the expression of the C class floral homeotic gene AGAMOUS (AG).	probable	Q9C5Q8

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3HTX, chain A
Confidence level:very confident
Coverage over the Query: 14-298,309-417,460-505,554-560,571-844,860-945
View the alignment between query and template
View the model in PyMOL