Citrus Sinensis ID: 002310
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 937 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SZC9 | 949 | Copper-transporting ATPas | yes | no | 0.961 | 0.949 | 0.651 | 0.0 | |
| B9DFX7 | 883 | Copper-transporting ATPas | no | no | 0.822 | 0.873 | 0.411 | 1e-160 | |
| P37385 | 790 | Probable copper-transport | yes | no | 0.785 | 0.931 | 0.354 | 1e-128 | |
| P07893 | 790 | Probable copper-transport | yes | no | 0.785 | 0.931 | 0.352 | 1e-126 | |
| Q4L970 | 795 | Copper-exporting P-type A | yes | no | 0.762 | 0.898 | 0.339 | 1e-110 | |
| Q4A0G1 | 794 | Copper-exporting P-type A | yes | no | 0.747 | 0.881 | 0.330 | 1e-110 | |
| P37279 | 747 | Cation-transporting ATPas | no | no | 0.769 | 0.965 | 0.344 | 1e-109 | |
| Q8CN02 | 794 | Copper-exporting P-type A | yes | no | 0.760 | 0.897 | 0.328 | 1e-108 | |
| Q5HL56 | 794 | Copper-exporting P-type A | yes | no | 0.760 | 0.897 | 0.328 | 1e-108 | |
| Q8NUQ9 | 802 | Copper-exporting P-type A | yes | no | 0.756 | 0.884 | 0.332 | 1e-106 |
| >sp|Q9SZC9|HMA6_ARATH Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/938 (65%), Positives = 729/938 (77%), Gaps = 37/938 (3%)
Query: 3 SALSLSTTTTTLTLFTISKA--RHFLKRIPMAYRIQPL----TSISTQTLPFASLSR--- 53
+A++ S+ +L L TISKA RHF A + PL S S + L SR
Sbjct: 14 TAMARSSGGPSLPLLTISKALNRHFTG----ARHLHPLLLARCSPSVRRLGGFHGSRFTS 69
Query: 54 -----RKFSAVLPPHIRCRLECMSSCAASFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDS 108
R A + P IR RLEC+SS + SF + G GG GG GGG GG
Sbjct: 70 SNSALRSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGD 129
Query: 109 KS-KLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAI 167
KLG + +S SSD+IILDVGGMTCGGC+ASVK+ILESQPQV+SASVNLTTETAI
Sbjct: 130 SKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAI 189
Query: 168 VWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKES 227
VWPV +AK +P+WQ+ LGE LA HLT+CGF+S+ RD+ T+NFFKVFETK +K+ RLKES
Sbjct: 190 VWPVPEAKSVPDWQKSLGETLANHLTNCGFQSTPRDLVTENFFKVFETKTKDKQARLKES 249
Query: 228 GRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVK 287
GR LAVSWALCAVCLVGHL+H LG A WIH HSTGFH+SL L TLLGPG +L+LDG+K
Sbjct: 250 GRELAVSWALCAVCLVGHLTHFLGVNAPWIHAIHSTGFHVSLCLITLLGPGRKLVLDGIK 309
Query: 288 SLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAK 347
SL KG+PNMNTLVGLGA+SSF+VSSLAA++PKLGWK FFEEP+MLIAFVLLG+NLEQRAK
Sbjct: 310 SLLKGSPNMNTLVGLGALSSFSVSSLAAMIPKLGWKTFFEEPVMLIAFVLLGRNLEQRAK 369
Query: 348 IKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA 407
IKATSDMTGLL +LPSKARLL+D D ++S +EVPCNSL VGD +V+LPGDR+PADGVV++
Sbjct: 370 IKATSDMTGLLSVLPSKARLLLDGDLQNSTVEVPCNSLSVGDLVVILPGDRVPADGVVKS 429
Query: 408 GRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQ 467
GRST+DESSFTGEPLPVTK S+VAAGSINLNGTLTVEV R GGETA+GDI+RLVEEAQ
Sbjct: 430 GRSTIDESSFTGEPLPVTKESGSQVAAGSINLNGTLTVEVHRSGGETAVGDIIRLVEEAQ 489
Query: 468 SREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSV 527
SREAPVQ+L D+V+G FTYGV+ALSAATF FWNLFGAHVLP+A+ G P+SLALQLSCSV
Sbjct: 490 SREAPVQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSALHNGSPMSLALQLSCSV 549
Query: 528 LRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLT 587
L + C + VGTSLGA RGLLLRGG+ILEKF++V+TVVFDKTGTLT
Sbjct: 550 L-----VVACPCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSLVDTVVFDKTGTLT 604
Query: 588 IGRPVVTKVVTSGSLTDPNSKQNPIHPL----SETEILKFAAGVESNTVHPIGKAIVEAA 643
G PVVT+V+ +NP H L SE E+L AA VESNT HP+GKAIV+AA
Sbjct: 605 KGHPVVTEVII---------PENPRHNLNDTWSEVEVLMLAAAVESNTTHPVGKAIVKAA 655
Query: 644 EFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMN 703
NCQ +K DGTF EEPGSG VAI+ +++V+VGT++W++ HG ++ +E ++ N
Sbjct: 656 RARNCQTMKAEDGTFTEEPGSGAVAIVNNKRVTVGTLEWVKRHGATGNSLLALEEHEINN 715
Query: 704 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763
QS+VY+GVDN LA +I ED++R+DAA VV +L+ QGI VYMLSGDK+N+A YVAS+VGI
Sbjct: 716 QSVVYIGVDNTLAAVIRFEDKVREDAAQVVENLTRQGIDVYMLSGDKRNAANYVASVVGI 775
Query: 764 PKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV 823
++V++GVKP EKK FINELQ ++ +VAMVGDGINDAAALASS++GVAMGGG GAASEV
Sbjct: 776 NHERVIAGVKPAEKKNFINELQKNKKIVAMVGDGINDAAALASSNVGVAMGGGAGAASEV 835
Query: 824 ASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPS 883
+ VVLMGNRL+QLL A+ELSR TMKTVKQNLWWAFGYNIVGIPIAAGVLLP+TGTMLTPS
Sbjct: 836 SPVVLMGNRLTQLLDAMELSRQTMKTVKQNLWWAFGYNIVGIPIAAGVLLPLTGTMLTPS 895
Query: 884 IAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSR 921
+AGALMG+SS+GVM NSLLLR +F S + P +
Sbjct: 896 MAGALMGVSSLGVMTNSLLLRYRFFSNRNDKNVKPEPK 933
|
Mediates copper transfer across the plastid envelope. Required for the delivery of copper into the plastid stroma, which is essential for the function of copper proteins. Seems to be selective for monovalent copper Cu(+) transport. Plays also a role in glucose signaling-mediated cell proliferation of root meristem in non-green tissues. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: nEC: 1 |
| >sp|B9DFX7|HMA8_ARATH Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana GN=PAA2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 565 bits (1456), Expect = e-160, Method: Compositional matrix adjust.
Identities = 347/844 (41%), Positives = 502/844 (59%), Gaps = 73/844 (8%)
Query: 118 EELSALSSDV-IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKV 176
E + +++SD I+LDV GM CGGC A VK +L S +V+SA VN+ TETA V + +V
Sbjct: 67 ESVKSITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEV 126
Query: 177 IPNWQRQLGEALAKHLTSCGFKSSLR--DMGTDNFFKVFETKMHEKRNRLKESGRGLAVS 234
+ E+LAK LT GF++ R MG K ++ + +K + L +S +A +
Sbjct: 127 TAD----TAESLAKRLTESGFEAKRRVSGMGVAENVKKWKEMVSKKEDLLVKSRNRVAFA 182
Query: 235 WALCAVCLVGHLSHILGAKASWIHVFHSTGFHL--------SLSLFTLLGPGFQLILDGV 286
W L A+C H SHIL + IH+ H + L L++ LLGPG +L+ DG+
Sbjct: 183 WTLVALCCGSHTSHILHSLG--IHIAHGGIWDLLHNSYVKGGLAVGALLGPGRELLFDGI 240
Query: 287 KSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKA-FFEEPIMLIAFVLLGKNLEQR 345
K+ K +PNMN+LVGLG++++F++S ++ + P+L W A FF+EP+ML+ FVLLG++LE+R
Sbjct: 241 KAFGKRSPNMNSLVGLGSMAAFSISLISLVNPELEWDASFFDEPVMLLGFVLLGRSLEER 300
Query: 346 AKIKATSDMTGLLGILPSKARLLV---DND-------AKDSI-IEVPCNSLHVGDHIVVL 394
AK++A++DM LL ++ +++RL++ DN+ + DSI I V + + VGD ++VL
Sbjct: 301 AKLQASTDMNELLSLISTQSRLVITSSDNNTPVDSVLSSDSICINVSVDDIRVGDSLLVL 360
Query: 395 PGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGET 454
PG+ P DG V AGRS VDES TGE LPV K V+AG+IN +G L ++ G +
Sbjct: 361 PGETFPVDGSVLAGRSVVDESMLTGESLPVFKEEGCSVSAGTINWDGPLRIKASSTGSNS 420
Query: 455 AMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAI--Q 512
+ IVR+VE+AQ APVQRLAD ++G F Y +++LSA TF FW G+H+ P +
Sbjct: 421 TISKIVRMVEDAQGNAAPVQRLADAIAGPFVYTIMSLSAMTFAFWYYVGSHIFPDVLLND 480
Query: 513 YGGP----VSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNI 568
GP ++L+L+L+ VL S C L + + +GTSLGA RG L+RGG++
Sbjct: 481 IAGPDGDALALSLKLAVDVLV--VSCPCALGLA---TPTAILIGTSLGAKRGYLIRGGDV 535
Query: 569 LEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVE 628
LE+ A ++ V DKTGTLT GRPVV+ V + G E E+LK AA VE
Sbjct: 536 LERLASIDCVALDKTGTLTEGRPVVSGVASLG--------------YEEQEVLKMAAAVE 581
Query: 629 SNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGV 688
HPI KAIV AE N + + + EPG GT+A I+ R V+VG+++W+ +
Sbjct: 582 KTATHPIAKAIVNEAESLNLKTPETRGQ--LTEPGFGTLAEIDGRFVAVGSLEWVSDRFL 639
Query: 689 DTSTFQE-VEMEDLMNQSL-------------VYVGVDNM-LAGLIYVEDRIRDDAAHVV 733
+ + V++E L++ L VYVG + + G I + D +R DA V
Sbjct: 640 KKNDSSDMVKLESLLDHKLSNTSSTSRYSKTVVYVGREGEGIIGAIAISDCLRQDAEFTV 699
Query: 734 NSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAM 793
L +GI +LSGD++ + VA VGI + + P +K FI+ LQ+ + VAM
Sbjct: 700 ARLQEKGIKTVLLSGDREGAVATVAKNVGIKSESTNYSLSPEKKFEFISNLQSSGHRVAM 759
Query: 794 VGDGINDAAALASSHIGVAMG--GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVK 851
VGDGINDA +LA + +G+A+ AAS ASV+L+ N+LS ++ AL L++ TM V
Sbjct: 760 VGDGINDAPSLAQADVGIALKIEAQENAASNAASVILVRNKLSHVVDALSLAQATMSKVY 819
Query: 852 QNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQ 911
QNL WA YN++ IPIAAGVLLP +TPS++G LM LSSI V++NSLLL+L S
Sbjct: 820 QNLAWAIAYNVISIPIAAGVLLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQLHKSETS 879
Query: 912 KASF 915
K S
Sbjct: 880 KNSL 883
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Mediates copper transfer across the chloroplast thylakoid membrane. Required for copper delivery into the thylakoids lumen, which is essential for the function of copper proteins. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 4 |
| >sp|P37385|ATSY_SYNE7 Probable copper-transporting ATPase SynA OS=Synechococcus elongatus (strain PCC 7942) GN=synA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 290/817 (35%), Positives = 442/817 (54%), Gaps = 81/817 (9%)
Query: 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQ 183
SS I+++V GM C GC A+V+R L+ V + SVNL T A V A +I +
Sbjct: 12 SSTSILVEVEGMKCAGCVAAVERRLQQTAGVEAVSVNLITRLAKV--DYDAALIED---- 65
Query: 184 LGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLV 243
L +T GF++ LR + E +++ RL+ LA++ L V
Sbjct: 66 -PTVLTTEITGLGFRAQLRQDDNPLTLPIAEIPPLQQQ-RLQ-----LAIAAFLLIVSSW 118
Query: 244 GHLSHIL-----GAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNT 298
GHL H L G W FH L+ + LLGPG ++ G + L GAPNMN+
Sbjct: 119 GHLGHWLDHPLPGTDQLW--------FHALLATWALLGPGRSILQAGWQGLRCGAPNMNS 170
Query: 299 LVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLL 358
LV LG S++ S +A L P+LGW FF+EP+ML+ F+LLG+ LE++A+ ++ + + LL
Sbjct: 171 LVLLGTGSAYLASLVALLWPQLGWVCFFDEPVMLLGFILLGRTLEEQARFRSQAALQNLL 230
Query: 359 GILPSKARLLV--DNDAKDSIIEVPCN-----SLHVGDHIVVLPGDRIPADGVVRAGRST 411
+ P +LL + A ++E P L GD++ VLPGDRIP DG + AG+ST
Sbjct: 231 ALQPETTQLLTAPSSIAPQDLLEAPAQIWPVAQLRAGDYVQVLPGDRIPVDGCIVAGQST 290
Query: 412 VDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREA 471
+D + TGEPLP V AG++NL+ L + + G +T + IVR V EAQ R+A
Sbjct: 291 LDTAMLTGEPLPQPCQVGDRVCAGTLNLSHRLVIRAEQTGSQTRLAAIVRCVAEAQQRKA 350
Query: 472 PVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYG----------------- 514
PVQR AD ++G F YGV A++A TF FW G+ P +Q
Sbjct: 351 PVQRFADAIAGRFVYGVCAIAALTFGFWATLGSRWWPQVLQQPLPGLLIHAPHHGMEMAH 410
Query: 515 ----GPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILE 570
P+ LAL L+ SVL + C L + + V T L A +G+L+RGG++LE
Sbjct: 411 PHSHSPLLLALTLAISVL--VVACPCALGLA---TPTAILVATGLAAEQGILVRGGDVLE 465
Query: 571 KFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESN 630
+ A + VFDKTGTLT G+ + ++ P+ + +L++AA +E++
Sbjct: 466 QLARIKHFVFDKTGTLTQGQFELIEI-------------QPLADVDPDRLLQWAAALEAD 512
Query: 631 TVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDT 690
+ HP+ A+ AA+ +N + +D + PG G + R + +G W++
Sbjct: 513 SRHPLATALQTAAQAANLAPIAASDRQQV--PGLGVSGTCDGRSLRLGNPTWVQVATAKL 570
Query: 691 STFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDK 750
T +++ D L +++D+ R +AA VV +L S+G V +LSGD+
Sbjct: 571 PTGSAAATS-------IWLADDQQLLACFWLQDQPRPEAAEVVQALRSRGATVQILSGDR 623
Query: 751 KNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIG 810
+ +A +A +G+ + V++ V P +K I LQ+ + VAM+GDGINDA ALA++ +G
Sbjct: 624 QTTAVALAQQLGLESETVVAEVLPEDKAAAIAALQSQGDAVAMIGDGINDAPALATAAVG 683
Query: 811 VAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAG 870
+++ G A + A ++L +RL +LVA LS++ ++T++QNL WA GYN+V +P+AAG
Sbjct: 684 ISLAAGSDIAQDSAGLLLSRDRLDSVLVAWNLSQMGLRTIRQNLTWALGYNVVMLPLAAG 743
Query: 871 VLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKF 907
LP G LTP+IAGA M +SS+ V++NSLLLR F
Sbjct: 744 AFLPAYGLALTPAIAGACMAVSSLAVVSNSLLLRYWF 780
|
Involved in copper transport. Synechococcus elongatus (strain PCC 7942) (taxid: 1140) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 4 |
| >sp|P07893|ATSY_SYNP6 Probable copper-transporting ATPase SynA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=synA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust.
Identities = 288/817 (35%), Positives = 441/817 (53%), Gaps = 81/817 (9%)
Query: 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQ 183
SS I+++V GM C GC A+V+R L+ V + SVNL T A V A +I +
Sbjct: 12 SSTSILVEVEGMKCAGCVAAVERRLQQTAGVEAVSVNLITRLAKV--DYDAALIED---- 65
Query: 184 LGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLV 243
L +T GF++ LR + E +++ RL+ LA++ L V
Sbjct: 66 -PTVLTTEITGLGFRAQLRQDDNPLTLPIAEIPPLQQQ-RLQ-----LAIAAFLLIVSSW 118
Query: 244 GHLSHIL-----GAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNT 298
GHL H L G W FH L+++ LLGPG ++ G + L GAPNMN+
Sbjct: 119 GHLGHWLDHPLPGTDQLW--------FHALLAIWALLGPGRSILQAGWQGLRCGAPNMNS 170
Query: 299 LVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLL 358
LV LG S++ S +A L P+LGW F +EP+ML+ F+LLG+ LE++A+ ++ + + LL
Sbjct: 171 LVLLGTGSAYLASLVALLWPQLGWVCFLDEPVMLLGFILLGRTLEEQARFRSQAALQNLL 230
Query: 359 GILPSKARLLV--DNDAKDSIIEVPCN-----SLHVGDHIVVLPGDRIPADGVVRAGRST 411
+ P +LL + A ++E P L GD++ VLPG RIP DG + AG+ST
Sbjct: 231 ALQPETTQLLTAPSSIAPQDLLEAPAQIWPVAQLRAGDYVQVLPGVRIPVDGCIVAGQST 290
Query: 412 VDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREA 471
+D + TGEPLP V AG++NL+ L + + G +T + IVR V EAQ R+A
Sbjct: 291 LDTAMLTGEPLPQPCQVGDRVCAGTLNLSHRLVIRAEQTGSQTRLAAIVRCVAEAQQRKA 350
Query: 472 PVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYG----------------- 514
PVQR AD ++G F YGV A++A TF FW G+ P +Q
Sbjct: 351 PVQRFADAIAGRFVYGVCAIAALTFGFWATLGSRWWPQVLQQPLPGLLIHAPHHGMEMAH 410
Query: 515 ----GPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILE 570
P+ LAL L+ SVL + C L + + V T L A +G+L+RGG++LE
Sbjct: 411 PHSHSPLLLALTLAISVL--VVACPCALGLA---TPTAILVATGLAAEQGILVRGGDVLE 465
Query: 571 KFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESN 630
+ A + VFDKTGTLT G+ + ++ P+ + +L++AA +E++
Sbjct: 466 QLARIKHFVFDKTGTLTQGQFELIEI-------------QPLADVDPDRLLQWAAALEAD 512
Query: 631 TVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDT 690
+ HP+ A+ AA+ +N + +D + PG G + R + +G W++
Sbjct: 513 SRHPLATALQTAAQAANLAPIAASDRQQV--PGLGVSGTCDGRSLRLGNPTWVQVATAKL 570
Query: 691 STFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDK 750
T +++ D L +++D+ R +AA VV +L S+G V +LSGD+
Sbjct: 571 PTGSAAATS-------IWLADDQQLLACFWLQDQPRPEAAEVVQALRSRGATVQILSGDR 623
Query: 751 KNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIG 810
+ +A +A +G+ + V++ V P +K I LQ+ + VAM+GDGINDA ALA++ +G
Sbjct: 624 QTTAVALAQQLGLESETVVAEVLPEDKAAAIAALQSQGDAVAMIGDGINDAPALATAAVG 683
Query: 811 VAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAG 870
+++ G A + A ++L +RL +LVA LS++ ++T++QNL WA GYN+V +P+AAG
Sbjct: 684 ISLAAGSDIAQDSAGLLLSRDRLDSVLVAWNLSQMGLRTIRQNLTWALGYNVVMLPLAAG 743
Query: 871 VLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKF 907
LP G LTP+IAGA M +SS+ V++NSLLLR F
Sbjct: 744 AFLPAYGLALTPAIAGACMAVSSLAVVSNSLLLRYWF 780
|
Involved in copper transport. Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (taxid: 269084) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 4 |
| >sp|Q4L970|COPA_STAHJ Copper-exporting P-type ATPase A OS=Staphylococcus haemolyticus (strain JCSC1435) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 272/801 (33%), Positives = 412/801 (51%), Gaps = 87/801 (10%)
Query: 120 LSALSSDVII----LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIV--WPVSK 173
+ L DV+I LD+ GMTC C+ ++++L P V A+VNLTTE A+V +P
Sbjct: 62 VQKLGYDVVIDKAELDITGMTCAACSNRIEKVLNKAPGVKDATVNLTTEQAMVTYYP--- 118
Query: 174 AKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFET-KMHEKRNRLKESGRGLA 232
Q L + + +R++G D K E + K+ LK L
Sbjct: 119 ------GQTDLDTLIGR----------IRNLGYDAQPKQSEEDQATRKQQELKHKRNKLM 162
Query: 233 VSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKG 292
+S L L+ L H+ + + F L+ G+Q + K+L G
Sbjct: 163 ISTILSLPLLMTMLVHLFNMHLP--DILMNPWFQFILATPIQFIIGWQFYVGAYKNLRNG 220
Query: 293 APNMNTLVGLGAVSSFTVS--------SLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQ 344
NM+ LV LG +++ S S A +P L +FE +LI +L GK LE
Sbjct: 221 GFNMDVLVALGTSAAYFYSIYEMIKWFSGATNMPHL----YFETSAVLITLILFGKYLEA 276
Query: 345 RAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGV 404
RAK + T+ ++ LL + +ARL+ DN + VP N ++V D +++ PG++IP DG
Sbjct: 277 RAKSQTTNALSELLNLQAKEARLIDDNGMEKM---VPLNQVNVDDILLIKPGEKIPVDGQ 333
Query: 405 VRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVE 464
+ G + +DES TGE +PV K + V ++N NG +T+ + G +TA+ +I+++VE
Sbjct: 334 IIKGETAIDESMLTGESMPVDKHVDDVVIGSTMNTNGVITIMATKVGKDTALSNIIKVVE 393
Query: 465 EAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLS 524
EAQS +AP+QRLAD +SG+F VIA++ TF+ W + + G AL +
Sbjct: 394 EAQSSKAPIQRLADIISGYFVPIVIAIALLTFLIW---------ITLVHPGQFEDALVAA 444
Query: 525 CSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTG 584
SVL + C + VGT A G+L +GG +E+ V+TVVFDKTG
Sbjct: 445 ISVL-----VIACPCALGLATPTSIMVGTGRAAENGILFKGGEYVERTHQVDTVVFDKTG 499
Query: 585 TLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAE 644
TLT G+P VT + + + L A E+N+ HP+ AIV A+
Sbjct: 500 TLTHGKPEVT------------------YFEGDKDTLTLVASAENNSEHPLATAIVNYAK 541
Query: 645 FSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTF-QEVEMEDLMN 703
V V + + PG G AII+D + VG + H ++ + Q+++ +
Sbjct: 542 QHKVNLVNVTN--YQTLPGHGIQAIIDDSMLFVGNQKLMLDHQINIQSIKQKMKQMEAEG 599
Query: 704 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763
+++ + D L G+I V D ++ A + LSS I ML+GD + +A+ +A VGI
Sbjct: 600 HTVMLIAYDGKLRGMIAVADTVKASAKEAIQQLSSMNIRTVMLTGDNERTAKAIAKEVGI 659
Query: 764 PKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV 823
D+V++GV P +K I +LQ ++ VAMVGDGINDA AL + IG+AMG G A E
Sbjct: 660 --DQVIAGVLPEDKAHHITQLQEQKHNVAMVGDGINDAPALVKADIGIAMGTGTEVAIEA 717
Query: 824 ASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPS 883
A + ++G + + A+ S T++ +KQNL+WAFGYNI GIPIAA L L P
Sbjct: 718 ADITILGGDIQLVPKAIHASHKTIRNIKQNLFWAFGYNIAGIPIAAMGL-------LAPW 770
Query: 884 IAGALMGLSSIGVMANSLLLR 904
IAGA M LSS+ V++N+L L+
Sbjct: 771 IAGAAMALSSVSVVSNALRLK 791
|
Involved in copper export. Staphylococcus haemolyticus (strain JCSC1435) (taxid: 279808) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
| >sp|Q4A0G1|COPA_STAS1 Copper-exporting P-type ATPase A OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 261/790 (33%), Positives = 406/790 (51%), Gaps = 90/790 (11%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALA 189
LDV GMTC C+ ++++L V A+VNLTTE A + A + +AL
Sbjct: 76 LDVIGMTCAACSNRIEKVLNRTDGVDQATVNLTTENATISYNPSATSV--------DALI 127
Query: 190 KHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHI 249
K + G+ + + K K +K L+ L +S L A L+ L H+
Sbjct: 128 KKIQKIGYDAQPK--------KEVAEKSSQKELELRSKLVKLIISAVLAAPLLLTMLVHL 179
Query: 250 LGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAVSSFT 309
G + +F + F L+ G+Q + K+L G+ NM+ LV LG +++
Sbjct: 180 FGIQIP--SIFMNPWFQFILATPVQFIIGWQFYVGAYKNLRNGSANMDVLVALGTSAAYF 237
Query: 310 VSSL--------AALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGIL 361
S A ++P L +FE +LI +L GK LE RAK + T+ ++ LL +
Sbjct: 238 YSLYEMVKWLFNANVMPHL----YFETSAVLITLILFGKYLETRAKTQTTNALSELLNLQ 293
Query: 362 PSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEP 421
+AR+L DN K+ +I P N + GD++++ PG++IP DG + G++++DES TGE
Sbjct: 294 AKEARVLRDN--KEQMI--PLNDVVEGDYLIIKPGEKIPVDGKIIKGKTSIDESMLTGES 349
Query: 422 LPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVS 481
+PV K+ + V ++N NG++TV+ + G +TA+ I+++VEEAQ +AP+QRLAD +S
Sbjct: 350 MPVEKVQDDNVIGSTMNKNGSITVKATKVGKDTALASIIKVVEEAQGSKAPIQRLADVIS 409
Query: 482 GHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMC 541
G+F V+ ++ TF+ W F G AL + +VL + C
Sbjct: 410 GYFVPIVVGIAVLTFIIWIAFVQQ---------GQFEPALVAAIAVL-----VIACPCAL 455
Query: 542 PWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGS 601
+ VGT A G+L +GG +E+ ++TVV DKTGT+T G+PVVT
Sbjct: 456 GLATPTSIMVGTGKAAENGILFKGGEHIERTHQIDTVVLDKTGTITNGKPVVTDFD---- 511
Query: 602 LTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEE 661
+ E L+ A E + HP+ AIV ++ N+K+ D T E
Sbjct: 512 --------------GDEEALQLLASAEKGSEHPLADAIV---NYAQTMNIKLLDTTDFEA 554
Query: 662 -PGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQ------SLVYVGVDNM 714
PG G A I + + VG ++ VD + ED+M Q + + + ++
Sbjct: 555 VPGRGIKANISGKNLIVGNRQFMNDENVDIK-----DSEDIMTQFEKSGKTAMLIAINQE 609
Query: 715 LAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 774
G++ V D ++D A + L I V ML+GD + +A+ +A+ VGI D +++ V P
Sbjct: 610 YRGMVAVADTVKDSTATAIKQLHDLNIKVVMLTGDNERTAQAIANEVGI--DTIIAQVLP 667
Query: 775 NEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLS 834
EK I LQ + +AMVGDG+NDA AL + IG+A+G G A E A V ++G L
Sbjct: 668 EEKAAKIKSLQTQDKTIAMVGDGVNDAPALVQADIGIAIGTGTEVAIEAADVTILGGDLL 727
Query: 835 QLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSI 894
+ A++ S+ T++ ++QNL+WAFGYN+ GIPIAA L L P IAGA M LSS+
Sbjct: 728 LIPKAIKASKATIRNIRQNLFWAFGYNVAGIPIAALGL-------LAPWIAGAAMALSSV 780
Query: 895 GVMANSLLLR 904
V+ N+L L+
Sbjct: 781 SVVTNALRLK 790
|
Involved in copper export. Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
| >sp|P37279|ATCS_SYNE7 Cation-transporting ATPase PacS OS=Synechococcus elongatus (strain PCC 7942) GN=pacS PE=3 SV=2 | Back alignment and function description |
|---|
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 272/790 (34%), Positives = 420/790 (53%), Gaps = 69/790 (8%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETA-IVWPVSKAKVIPNWQRQLGEAL 188
L + GM C CA ++ ++++ P V SVN E A + + + +V A+
Sbjct: 7 LTLRGMGCAACAGRIEALIQALPGVQECSVNFGAEQAQVCYDPALTQV---------AAI 57
Query: 189 AKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLA----VSWALCAVCLVG 244
+ + G+ + DN E + E R+R S R LA VS + ++ ++G
Sbjct: 58 QAAIEAAGYHAFPLQDPWDN-----EVEAQE-RHRRARSQRQLAQRVWVSGLIASLLVIG 111
Query: 245 HLSHILGAKASWIHVF-HSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLG 303
L +LG I ++ H G L L+L +L G ++ K+ + M+TLV +G
Sbjct: 112 SLPMMLGISIPGIPMWLHHPGLQLGLTL-PVLWAGRSFFINAWKAFRQNTATMDTLVAVG 170
Query: 304 AVSSFTVSSLAALVPKLGW--------KAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMT 355
++F S L P+ W ++E ++IA +LLG++LE+RAK + ++ +
Sbjct: 171 TGAAFLYSLAVTLFPQ--WLTRQGLPPDVYYEAIAVIIALLLLGRSLEERAKGQTSAAIR 228
Query: 356 GLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDES 415
L+G+ AR+L + +P + V D + V PG+++P DG V GRSTVDES
Sbjct: 229 QLIGLQAKTARVLRQGQE----LTLPITEVQVEDWVRVRPGEKVPVDGEVIDGRSTVDES 284
Query: 416 SFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQR 475
TGE LPV K EV ++N G+LT+ R G ET + IV+LV++AQ+ +AP+QR
Sbjct: 285 MVTGESLPVQKQVGDEVIGATLNKTGSLTIRATRVGRETFLAQIVQLVQQAQASKAPIQR 344
Query: 476 LADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSIC 535
LADQV+G F VIA++ TFV W + G V+LAL + VL I
Sbjct: 345 LADQVTGWFVPAVIAIAILTFVLW-----------FNWIGNVTLALITAVGVL-----II 388
Query: 536 CCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTK 595
C + VGT GA G+L++ LE + TV+ DKTGTLT G+P VT
Sbjct: 389 ACPCALGLATPTSIMVGTGKGAEYGILIKSAESLELAQTIQTVILDKTGTLTQGQPSVTD 448
Query: 596 VVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVAD 655
+ G D + +Q +L +AA +E+ + HP+ +AIV E V D
Sbjct: 449 FLAIG---DRDQQQT---------LLGWAASLENYSEHPLAEAIVRYGEAQGITLSTVTD 496
Query: 656 GTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQ-EVEMEDLMNQSLVYVGVDNM 714
F PGSG +E + +GT WL G++TS Q + E + +++V V D
Sbjct: 497 --FEAIPGSGVQGQVEGIWLQIGTQRWLGELGIETSALQNQWEDWEAAGKTVVGVAADGH 554
Query: 715 LAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 774
L ++ + D+++ + VV SL G+ V ML+GD + +A+ +A VGI +VL+ V+P
Sbjct: 555 LQAILSIADQLKPSSVAVVRSLQRLGLQVVMLTGDNRRTADAIAQAVGI--TQVLAEVRP 612
Query: 775 NEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLS 834
++K + +LQ+ VVAMVGDGINDA ALA + +G+A+G G A + + L+ L
Sbjct: 613 DQKAAQVAQLQSRGQVVAMVGDGINDAPALAQADVGIAIGTGTDVAIAASDITLISGDLQ 672
Query: 835 QLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSI 894
++ A++LSR TM ++QNL++AF YN+ GIPIAAG+L P+ G +L+P +AGA M SS+
Sbjct: 673 GIVTAIQLSRATMTNIRQNLFFAFIYNVAGIPIAAGILYPLLGWLLSPMLAGAAMAFSSV 732
Query: 895 GVMANSLLLR 904
V+ N+L LR
Sbjct: 733 SVVTNALRLR 742
|
May play a role in the osmotic adaptation. Synechococcus elongatus (strain PCC 7942) (taxid: 1140) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q8CN02|COPA_STAES Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis (strain ATCC 12228) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 265/806 (32%), Positives = 421/806 (52%), Gaps = 93/806 (11%)
Query: 118 EELSALSSDVII----LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSK 173
E++ +L DV + L++ GMTC C+ ++++L V A+VNLTTE A++
Sbjct: 59 EQIQSLGYDVAVEQVELNINGMTCAACSNRIEKVLNQTQGVQQATVNLTTEQALI----- 113
Query: 174 AKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAV 233
K P+ EAL K + + G+ + + + + + K+ LK L +
Sbjct: 114 -KYYPSATNT--EALIKRIQNIGYDAETKTSS--------KAQSNRKKQELKHKRNKLII 162
Query: 234 SWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGA 293
S L L+ + HI + S + + L LS G+Q + K+L G+
Sbjct: 163 SAILSLPLLLVMVVHI--SPISIPSILVNPWVQLILSTPVQFIIGWQFYVGAYKNLRNGS 220
Query: 294 PNMNTLVGLGAVSSFTVSSLAALV--------PKLGWKAFFEEPIMLIAFVLLGKNLEQR 345
NM+ LV +G +++ S ++ P L +FE +LI +LLGK LE R
Sbjct: 221 ANMDVLVAVGTSAAYFYSIYEMMMWLTHQTHHPHL----YFETSAILITLILLGKYLEAR 276
Query: 346 AKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVV 405
AK + T+ ++ LL + +AR++ +N I +P + + VGD +++ PG++IP DG V
Sbjct: 277 AKSQTTNALSELLNLQAKEARVIKENKE----IMLPLDKVKVGDTLLIKPGEKIPVDGKV 332
Query: 406 RAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEE 465
G +++DES TGE +PV K V ++N NG++ +E + GG+TA+ I+++VE+
Sbjct: 333 TKGDTSIDESMLTGESIPVEKSSGDSVIGSTMNKNGSIMIEATQVGGDTALSHIIKVVED 392
Query: 466 AQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSC 525
AQS +AP+QRLAD +SG+F V++++ TF+ W +F V P G AL +
Sbjct: 393 AQSSKAPIQRLADIISGYFVPIVVSIAVITFIIWIIF---VHP------GQFEPALVSAI 443
Query: 526 SVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGT 585
SVL + C + VGT A G+L +GG +E+ V+T+V DKTGT
Sbjct: 444 SVL-----VIACPCALGLATPTSIMVGTGRAAENGILFKGGQFVERAHYVDTIVLDKTGT 498
Query: 586 LTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEF 645
+T G+PVVT V + + L+ A E+ + HP+ AIV +
Sbjct: 499 ITNGQPVVTDYV------------------GDNDTLQLLASAENASEHPLADAIV---TY 537
Query: 646 SNCQNVKVADG-TFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMN- 703
+ + + + D TF PG G A I +++ VG + + + S ++ D +N
Sbjct: 538 AKDKGLNLLDNDTFKSIPGHGIKATIHQQQILVGNRKLMNDYNISISN----KLNDQLNH 593
Query: 704 -----QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA 758
Q+ + + VDN + G+I V D +++DA + L + I V ML+GD +A+ +A
Sbjct: 594 YEHLGQTAMMIAVDNQINGIIAVADTVKNDAKQAIKELRNMNIDVVMLTGDNNRTAQTIA 653
Query: 759 SLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVG 818
VGI + V++ V P EK I+ LQ+ VAMVGDGINDA AL + IG+A+G G
Sbjct: 654 KQVGI--EHVIAEVLPEEKAHQISLLQDKGKQVAMVGDGINDAPALVKADIGMAIGTGAE 711
Query: 819 AASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGT 878
A E A + ++G L + A++ S+ T+K ++QNL+WAFGYN+ GIPIAA L
Sbjct: 712 VAIEAADITILGGDLLLVPKAIKASKATIKNIRQNLFWAFGYNVAGIPIAACGL------ 765
Query: 879 MLTPSIAGALMGLSSIGVMANSLLLR 904
L P IAGA M LSS+ V+ N+L L+
Sbjct: 766 -LAPWIAGAAMALSSVSVVMNALRLK 790
|
Involved in copper export. Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
| >sp|Q5HL56|COPA_STAEQ Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 265/806 (32%), Positives = 421/806 (52%), Gaps = 93/806 (11%)
Query: 118 EELSALSSDVII----LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSK 173
E++ +L DV + L++ GMTC C+ ++++L V A+VNLTTE A++
Sbjct: 59 EQIQSLGYDVAVEQVELNINGMTCAACSNRIEKVLNQTQGVQQATVNLTTEQALI----- 113
Query: 174 AKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAV 233
K P+ EAL K + + G+ + + + + + K+ LK L +
Sbjct: 114 -KYYPSATNT--EALIKRIQNIGYDAETKTSS--------KAQSNRKKQELKHKRNKLII 162
Query: 234 SWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGA 293
S L L+ + HI + S + + L LS G+Q + K+L G+
Sbjct: 163 SAILSLPLLLVMVVHI--SPISIPSILVNPWVQLILSTPVQFIIGWQFYVGAYKNLRNGS 220
Query: 294 PNMNTLVGLGAVSSFTVSSLAALV--------PKLGWKAFFEEPIMLIAFVLLGKNLEQR 345
NM+ LV +G +++ S ++ P L +FE +LI +LLGK LE R
Sbjct: 221 ANMDVLVAVGTSAAYFYSIYEMMMWLTHQTHHPHL----YFETSAILITLILLGKYLEAR 276
Query: 346 AKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVV 405
AK + T+ ++ LL + +AR++ +N I +P + + VGD +++ PG++IP DG V
Sbjct: 277 AKSQTTNALSELLNLQAKEARVIKENKE----IMLPLDKVKVGDTLLIKPGEKIPVDGKV 332
Query: 406 RAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEE 465
G +++DES TGE +PV K V ++N NG++ +E + GG+TA+ I+++VE+
Sbjct: 333 TKGDTSIDESMLTGESIPVEKSSGDSVIGSTMNKNGSIMIEATQVGGDTALSHIIKVVED 392
Query: 466 AQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSC 525
AQS +AP+QRLAD +SG+F V++++ TF+ W +F V P G AL +
Sbjct: 393 AQSSKAPIQRLADIISGYFVPIVVSIAVITFIIWIIF---VHP------GQFEPALVSAI 443
Query: 526 SVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGT 585
SVL + C + VGT A G+L +GG +E+ V+T+V DKTGT
Sbjct: 444 SVL-----VIACPCALGLATPTSIMVGTGRAAENGILFKGGQFVERAHYVDTIVLDKTGT 498
Query: 586 LTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEF 645
+T G+PVVT V + + L+ A E+ + HP+ AIV +
Sbjct: 499 ITNGQPVVTDYV------------------GDNDTLQLLASAENASEHPLADAIV---TY 537
Query: 646 SNCQNVKVADG-TFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMN- 703
+ + + + D TF PG G A I +++ VG + + + S ++ D +N
Sbjct: 538 AKDKGLNLLDNDTFKSIPGHGIKATIHQQQILVGNRKLMNDYNISISN----KLNDQLNH 593
Query: 704 -----QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA 758
Q+ + + VDN + G+I V D +++DA + L + I V ML+GD +A+ +A
Sbjct: 594 YEHLGQTAMMIAVDNQINGIIAVADTVKNDAKQAIKELRNMNIDVVMLTGDNNRTAQTIA 653
Query: 759 SLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVG 818
VGI + V++ V P EK I+ LQ+ VAMVGDGINDA AL + IG+A+G G
Sbjct: 654 KQVGI--EHVIAEVLPEEKAHQISLLQDKGKQVAMVGDGINDAPALVKADIGMAIGTGAE 711
Query: 819 AASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGT 878
A E A + ++G L + A++ S+ T+K ++QNL+WAFGYN+ GIPIAA L
Sbjct: 712 VAIEAADITILGGDLLLVPKAIKASKATIKNIRQNLFWAFGYNVAGIPIAACGL------ 765
Query: 879 MLTPSIAGALMGLSSIGVMANSLLLR 904
L P IAGA M LSS+ V+ N+L L+
Sbjct: 766 -LAPWIAGAAMALSSVSVVMNALRLK 790
|
Involved in copper export. Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (taxid: 176279) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
| >sp|Q8NUQ9|COPA_STAAW Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain MW2) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust.
Identities = 266/799 (33%), Positives = 406/799 (50%), Gaps = 90/799 (11%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALA 189
LD+ GMTC C++ ++++L V +A+VNLTTE +AKV + + L
Sbjct: 76 LDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTE--------QAKVDYYPEETDADKLV 127
Query: 190 KHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHI 249
+ G+ +S++D D + K L+ L +S L L+ H+
Sbjct: 128 TRIQKLGYDASIKDNNKD--------QTSRKAEALQHKLIKLIISAVLSLPLLMLMFVHL 179
Query: 250 LGAKASWIHV---FHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAVS 306
+H+ F + F L+ G+Q + K+L G NM+ LV +G +
Sbjct: 180 FN-----MHIPALFTNPWFQFILATPVQFIIGWQFYVGAYKNLRNGGANMDVLVAVGTSA 234
Query: 307 SFTVSSLAALVPKLGWKA-----FFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGIL 361
++ S+ +V L +FE +LI +L GK LE RAK + T+ + LL +
Sbjct: 235 AY-FYSIYEMVRWLNGSTTQPHLYFETSAVLITLILFGKYLEARAKSQTTNALGELLSLQ 293
Query: 362 PSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEP 421
+AR+L D + + +P N +HVGD ++V PG++IP DG + G + +DES TGE
Sbjct: 294 AKEARILKDGNE----VMIPLNEVHVGDTLIVKPGEKIPVDGKIIKGMTAIDESMLTGES 349
Query: 422 LPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVS 481
+PV K + V ++N NGT+T+ + GG+TA+ +I+++VEEAQS +AP+QRLAD +S
Sbjct: 350 IPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVEEAQSSKAPIQRLADIIS 409
Query: 482 GHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMC 541
G+F V+ ++ TF+ W V P G AL S SVL + C
Sbjct: 410 GYFVPIVVGIALLTFIVWITL---VTP------GTFEPALVASISVL-----VIACPCAL 455
Query: 542 PWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGS 601
+ VGT A G+L +GG +E+ ++T+V DKTGT+T GRPVVT
Sbjct: 456 GLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDTIVLDKTGTITNGRPVVTDY----- 510
Query: 602 LTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEE 661
H + + L+ A E ++ HP+ +AIV A+ Q TF
Sbjct: 511 -----------H--GDNQTLQLLATAEKDSEHPLAEAIVNYAK--EKQLTLTETTTFKAV 555
Query: 662 PGSGTVAIIEDRKVSVGTIDW-------LRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNM 714
PG G A I+ + VG L H D T+ E + ++ + + V+
Sbjct: 556 PGHGIEATIDHHHILVGNRKLMADNDISLPKHISDDLTYYERD-----GKTAMLIAVNYS 610
Query: 715 LAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 774
L G+I V D ++D A + L GI V ML+GD KN+A+ +A VGI D V++ + P
Sbjct: 611 LTGIIAVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGI--DTVIADILP 668
Query: 775 NEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLS 834
EK I +LQ VAMVGDG+NDA AL + IG+A+G G A E A + ++G L
Sbjct: 669 EEKAAQIAKLQQQGKKVAMVGDGVNDAPALVKADIGIAIGTGTEVAIEAADITILGGDLM 728
Query: 835 QLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSI 894
+ A+ S+ T++ ++QNL+WAFGYNI GIPIAA L L P +AGA M LSS+
Sbjct: 729 LIPKAIYASKATIRNIRQNLFWAFGYNIAGIPIAALGL-------LAPWVAGAAMALSSV 781
Query: 895 GVMANSLLL-RLKFSSKQK 912
V+ N+L L +++ ++K
Sbjct: 782 SVVTNALRLKKMRLEPRRK 800
|
Involved in copper export. Staphylococcus aureus (strain MW2) (taxid: 196620) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 937 | ||||||
| 224073351 | 865 | heavy metal ATPase [Populus trichocarpa] | 0.899 | 0.974 | 0.768 | 0.0 | |
| 225448275 | 928 | PREDICTED: putative copper-transporting | 0.852 | 0.860 | 0.779 | 0.0 | |
| 255581361 | 947 | copper-transporting atpase paa1, putativ | 0.978 | 0.968 | 0.705 | 0.0 | |
| 224059034 | 879 | heavy metal ATPase [Populus trichocarpa] | 0.913 | 0.973 | 0.744 | 0.0 | |
| 356524832 | 935 | PREDICTED: putative copper-transporting | 0.838 | 0.840 | 0.729 | 0.0 | |
| 449438779 | 933 | PREDICTED: copper-transporting ATPase PA | 0.855 | 0.859 | 0.719 | 0.0 | |
| 42573157 | 949 | putative copper-transporting ATPase PAA1 | 0.961 | 0.949 | 0.651 | 0.0 | |
| 3549654 | 870 | metal-transporting P-type ATPase (fragme | 0.850 | 0.916 | 0.696 | 0.0 | |
| 42573159 | 949 | putative copper-transporting ATPase PAA1 | 0.961 | 0.949 | 0.650 | 0.0 | |
| 297802654 | 949 | predicted protein [Arabidopsis lyrata su | 0.958 | 0.946 | 0.651 | 0.0 |
| >gi|224073351|ref|XP_002304082.1| heavy metal ATPase [Populus trichocarpa] gi|222841514|gb|EEE79061.1| heavy metal ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1271 bits (3290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 656/854 (76%), Positives = 731/854 (85%), Gaps = 11/854 (1%)
Query: 62 PHIRCRLECMSSCAASFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGGEELS 121
P +R RLEC+SS AASFG G GG GGGGGGGG+ G D +S S G EE
Sbjct: 17 PLVRLRLECVSSSAASFGTTSGGGGGGGEFGGGGGGGGSNGGDA-ESNSVAEAVGAEEAP 75
Query: 122 ALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQ 181
LS DVIILDVGGMTCGGCAASVKRILESQ QV SASVNL TETAIV PV++AK++PNWQ
Sbjct: 76 VLSPDVIILDVGGMTCGGCAASVKRILESQSQVFSASVNLATETAIVRPVTEAKIVPNWQ 135
Query: 182 RQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVC 241
+QLGEALAKHLTSCGF S+LRD G DN FKVFE KM EKR+RLKESG LAVSWALCAVC
Sbjct: 136 KQLGEALAKHLTSCGFISNLRDEGRDNVFKVFEKKMDEKRDRLKESGHQLAVSWALCAVC 195
Query: 242 LVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVG 301
L+GH+SHI KASWIHVFHS GFHLSLSLFTLLGPG QLI DGVKSLFKGAPNMNTLVG
Sbjct: 196 LLGHVSHIFATKASWIHVFHSVGFHLSLSLFTLLGPGRQLIHDGVKSLFKGAPNMNTLVG 255
Query: 302 LGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGIL 361
LGA+SSF VSSLAALVPKLGWKAFFEEPIMLIAFVLLG+NLEQRAKIKA SDMTGLL +L
Sbjct: 256 LGALSSFAVSSLAALVPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKAASDMTGLLSVL 315
Query: 362 PSKARLLVDNDAKD--SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTG 419
P+KARL+V+ DA D SI+EVPC+SL VGD IVVLPGDR+PADG VRAGRST+DESSFTG
Sbjct: 316 PTKARLVVNGDATDLGSIVEVPCSSLSVGDQIVVLPGDRVPADGTVRAGRSTIDESSFTG 375
Query: 420 EPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQ 479
EPLPVTK+P S V+AGSINLNGTLT+EV+RPGGETAMGDIVRLVEEAQSREAPVQRLAD+
Sbjct: 376 EPLPVTKLPGSHVSAGSINLNGTLTIEVKRPGGETAMGDIVRLVEEAQSREAPVQRLADK 435
Query: 480 VSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLS 539
VSGHFTYGV+A+SAATF+FW++FG H+LP A+ G PVSLALQLSCSVL + C
Sbjct: 436 VSGHFTYGVMAISAATFMFWSMFGTHILPAALNQGNPVSLALQLSCSVL-----VVACPC 490
Query: 540 MCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTS 599
+ VGTSLGATRGLLLRGGN+LEKF+MVN+VVFDKTGTLTIGRPVVTKVV+
Sbjct: 491 ALGLATPTAVLVGTSLGATRGLLLRGGNVLEKFSMVNSVVFDKTGTLTIGRPVVTKVVSL 550
Query: 600 GSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVK-VADGTF 658
G + +S+ P SE E+LK AAGVESNT+HP+GKAIVEAA ++C +VK V DGTF
Sbjct: 551 GGMEITDSQLKPNATWSEVEVLKLAAGVESNTIHPVGKAIVEAARAASCTSVKQVTDGTF 610
Query: 659 IEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGL 718
+EEPGSG VA IE++ VSVGT+DW++ HGV + FQEV ED+ NQS+VYVGVDN LAGL
Sbjct: 611 MEEPGSGAVATIENKVVSVGTLDWIQRHGVCENPFQEV--EDIKNQSVVYVGVDNTLAGL 668
Query: 719 IYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKK 778
IY ED+IR+DA HVV SLS QGI VYMLSGD+K +AEYVASLVGIPK+KVLSGVKP+EKK
Sbjct: 669 IYFEDQIREDARHVVESLSCQGINVYMLSGDRKKNAEYVASLVGIPKEKVLSGVKPDEKK 728
Query: 779 RFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLV 838
+FI+ELQ D+N+VAMVGDGINDAAALA SH+GVAMG GVGAASEV+S+VLMGNRLSQ+L
Sbjct: 729 KFISELQKDQNIVAMVGDGINDAAALAESHVGVAMGEGVGAASEVSSIVLMGNRLSQVLD 788
Query: 839 ALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMA 898
ALELSRLTMKTVKQNLWWAF YNIVGIPIAAGVLLP+TGT+LTPSIAGALMG SSIGVM
Sbjct: 789 ALELSRLTMKTVKQNLWWAFAYNIVGIPIAAGVLLPITGTILTPSIAGALMGFSSIGVMM 848
Query: 899 NSLLLRLKFSSKQK 912
NSLLLRLKFSSKQK
Sbjct: 849 NSLLLRLKFSSKQK 862
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448275|ref|XP_002274497.1| PREDICTED: putative copper-transporting ATPase PAA1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1271 bits (3289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/809 (77%), Positives = 700/809 (86%), Gaps = 10/809 (1%)
Query: 116 GGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAK 175
EE++ S DVIILDVGGMTCGGCAASVKRILESQPQVSS SVNLTTETAIVWPVS+AK
Sbjct: 103 AAEEVTGFSPDVIILDVGGMTCGGCAASVKRILESQPQVSSVSVNLTTETAIVWPVSEAK 162
Query: 176 VIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSW 235
VIPNWQ+QLGE LAKHLT+CGFKS+ RD DNFFKVFE KM EKRN+LKESGR LAVSW
Sbjct: 163 VIPNWQQQLGEELAKHLTNCGFKSNPRDSVRDNFFKVFERKMDEKRNKLKESGRELAVSW 222
Query: 236 ALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPN 295
ALCAVCL GHLSH LG KASWIH FHSTGFHLSLSLFTLLGPG LILDG+KS KGAPN
Sbjct: 223 ALCAVCLFGHLSHFLGTKASWIHAFHSTGFHLSLSLFTLLGPGRGLILDGLKSFLKGAPN 282
Query: 296 MNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMT 355
MNTLVGLGAVSSF+VSSLAAL+P+LGWKAFFEEPIMLIAFVLLG+NLEQRAKIKATSDMT
Sbjct: 283 MNTLVGLGAVSSFSVSSLAALIPELGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMT 342
Query: 356 GLLGILPSKARLLVDNDAKD--SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVD 413
GLL ILP+KARL ++ D+++ S +EVPCN+L VGD IVVLPGDR+PADG+VRAGRSTVD
Sbjct: 343 GLLSILPAKARLFINGDSEEFSSTVEVPCNNLSVGDQIVVLPGDRVPADGIVRAGRSTVD 402
Query: 414 ESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPV 473
ESSFTGEPLPVTK+P +EV+AGSINLNGTL VEVRRPGGETAMGDIVRLVE AQSREAPV
Sbjct: 403 ESSFTGEPLPVTKLPGAEVSAGSINLNGTLRVEVRRPGGETAMGDIVRLVEAAQSREAPV 462
Query: 474 QRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETS 533
QRLAD+V+GHFTYGV+ALSAATF+FWNLFGA +LP A G VSLALQLSCSVL
Sbjct: 463 QRLADKVAGHFTYGVMALSAATFMFWNLFGARILPAAFHQGSSVSLALQLSCSVL----- 517
Query: 534 ICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVV 593
+ C + VGTSLGAT+GLLLRGGNILEKF+ +NT+VFDKTGTLTIGRPVV
Sbjct: 518 VVACPCALGLATPTAILVGTSLGATKGLLLRGGNILEKFSEMNTIVFDKTGTLTIGRPVV 577
Query: 594 TKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKV 653
TKVVT G D +S+++ SE E+LK AAGVESNT+HP+GKAIVEAA NCQNVKV
Sbjct: 578 TKVVTPGCEKDTDSRKSSKSIWSEVEVLKLAAGVESNTIHPVGKAIVEAARAVNCQNVKV 637
Query: 654 ADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDN 713
DGTF+EEPGSG VA +E++KVSVGT DW++ HGV + FQEV ++L NQS+VYVGVD
Sbjct: 638 VDGTFVEEPGSGAVATVENKKVSVGTFDWVQRHGVQENPFQEV--DELKNQSVVYVGVDG 695
Query: 714 MLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVK 773
LAGLIY ED+IRDDA HVV SLS QGI VYMLSGDK+N+AE+VAS VGIPKDKVLSGVK
Sbjct: 696 TLAGLIYFEDQIRDDARHVVESLSRQGISVYMLSGDKRNAAEHVASSVGIPKDKVLSGVK 755
Query: 774 PNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRL 833
PNEK +FI ELQ N VAMVGDGINDAAALASS IG+AMGGGVGAASEV+S+VLMGNRL
Sbjct: 756 PNEKSKFIRELQKAHNTVAMVGDGINDAAALASSDIGIAMGGGVGAASEVSSIVLMGNRL 815
Query: 834 SQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSS 893
SQLL A ELSRLTMKTVKQNLWWAF YNIVGIPIAAG+LLP+TGTMLTPSIAGALMGLSS
Sbjct: 816 SQLLDAFELSRLTMKTVKQNLWWAFAYNIVGIPIAAGMLLPITGTMLTPSIAGALMGLSS 875
Query: 894 IGVMANSLLLRLKFSSKQKASFQA-PSSR 921
+GVM NSLLLR KFS+KQK ++A P+S+
Sbjct: 876 VGVMTNSLLLRSKFSAKQKQIYEASPNSK 904
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255581361|ref|XP_002531490.1| copper-transporting atpase paa1, putative [Ricinus communis] gi|223528899|gb|EEF30897.1| copper-transporting atpase paa1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1244 bits (3218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/953 (70%), Positives = 771/953 (80%), Gaps = 36/953 (3%)
Query: 1 MESALSLSTTTTTLTLFTISKA--RHFLKRIPMAYRIQPLTSISTQTLPFASLSRRKFSA 58
MES L +STT + TLF +SKA RHF LT + + +SL R+F++
Sbjct: 1 MESTLCISTTAASFTLFKLSKALNRHF-----------TLTKAAASSSSSSSLFTRRFTS 49
Query: 59 VLP------------PHIRCRLECMSSCAASFGAAGGSAGGDVGGGGGGGGGGNGGSDGG 106
P IR RL C+S+ A+S + G G GG GGGGG SD G
Sbjct: 50 FHSSSSSLRSLCALSPLIRHRLACVSNSASS-SFSAGGNGSGGPFGGDGGGGGGDRSDAG 108
Query: 107 DSKSKLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETA 166
DSKS L G E++SALS DVIILDVGGMTCGGCAASVKRILESQPQVSSA+VNLTTETA
Sbjct: 109 DSKSNLAAGGTEDVSALSPDVIILDVGGMTCGGCAASVKRILESQPQVSSATVNLTTETA 168
Query: 167 IVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKE 226
+VWPVS+A VIPNW+++LGEALAKHLT+CGF S+ RD G NFF VFE KM EKR RLKE
Sbjct: 169 VVWPVSEATVIPNWKKELGEALAKHLTTCGFSSNPRDAGRQNFFDVFEKKMDEKRARLKE 228
Query: 227 SGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGV 286
SGR LAVSWALCAVCL+GHLSHI KASWIH+FHSTGFHLS+SLFTLLGPG QLILDG+
Sbjct: 229 SGRELAVSWALCAVCLLGHLSHIFPLKASWIHLFHSTGFHLSMSLFTLLGPGRQLILDGL 288
Query: 287 KSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRA 346
KSLFKGAPNMNTLVGLGA+SSF VSSLAAL+P+LGWKAFFEEPIMLIAFVLLG+NLEQRA
Sbjct: 289 KSLFKGAPNMNTLVGLGALSSFAVSSLAALIPRLGWKAFFEEPIMLIAFVLLGRNLEQRA 348
Query: 347 KIKATSDMTGLLGILPSKARLLVDNDAKD--SIIEVPCNSLHVGDHIVVLPGDRIPADGV 404
KIKA SDMTGLL ILPSKARLLV ++ +D SI+EVPC SL VGD IVVLPGDR+PADG+
Sbjct: 349 KIKAASDMTGLLSILPSKARLLVQSNIEDPGSIVEVPCTSLSVGDQIVVLPGDRVPADGI 408
Query: 405 VRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVE 464
VRAGRST+DESSFTGEPLPVTK+P S+VAAGSINLNGTLTVEV+RPGGETA+GDIVRLVE
Sbjct: 409 VRAGRSTIDESSFTGEPLPVTKLPGSKVAAGSINLNGTLTVEVQRPGGETAIGDIVRLVE 468
Query: 465 EAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLS 524
EAQ REAPVQRLAD+VSGHFTYGV+ALSAATF+FW LFG H+LP A+ +G PVSLALQLS
Sbjct: 469 EAQGREAPVQRLADKVSGHFTYGVMALSAATFMFWKLFGTHMLPPAVYHGNPVSLALQLS 528
Query: 525 CSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTG 584
CSVL + C + VGTSLGATRGLLLRGGN+LEKF+MV T+VFDKTG
Sbjct: 529 CSVL-----VIACPCALGLATPTAVLVGTSLGATRGLLLRGGNVLEKFSMVKTIVFDKTG 583
Query: 585 TLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAE 644
TLTIGRPVVTKVVT G + +++ N H SE E+L+ AA VESNT+HP+GKAIV+AA+
Sbjct: 584 TLTIGRPVVTKVVTLGDIKITDTQMNANHKWSEVEVLRLAAAVESNTLHPVGKAIVQAAQ 643
Query: 645 FSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQ 704
QN+KV DGTF+EEPGSG VA +++++VSVGT+DW++ +GVD FQEV EDL NQ
Sbjct: 644 AVTYQNMKVTDGTFMEEPGSGAVATVDNKQVSVGTLDWVQRNGVDGILFQEV--EDLKNQ 701
Query: 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764
S+VYVGV+N LAG+IY+ED+IR+DA VV SL QGI VYMLSGDK+ +AE+VAS+VGI
Sbjct: 702 SIVYVGVENTLAGIIYLEDQIREDARQVVESLCRQGIDVYMLSGDKRTTAEHVASVVGIQ 761
Query: 765 KDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVA 824
K+KVL+GVKP+EKK+FI+ELQ +N+VAMVGDGINDAAALA SH+GVAMGGGVGAASEV+
Sbjct: 762 KEKVLAGVKPDEKKKFISELQKHQNIVAMVGDGINDAAALALSHVGVAMGGGVGAASEVS 821
Query: 825 SVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSI 884
SVVL GNRLSQLL ALELSRLTMKTVKQNLWWAF YNI+GIPIAAG+LLP+TGTMLTPSI
Sbjct: 822 SVVLTGNRLSQLLDALELSRLTMKTVKQNLWWAFAYNIIGIPIAAGMLLPLTGTMLTPSI 881
Query: 885 AGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQLMDLKGK 937
AGALMGLSSIGVM NSLLLR KFSSKQ +A S N + S L+D K
Sbjct: 882 AGALMGLSSIGVMTNSLLLRFKFSSKQTQDSKA-SPSTNVSFGSDHLIDQTKK 933
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224059034|ref|XP_002299685.1| heavy metal ATPase [Populus trichocarpa] gi|222846943|gb|EEE84490.1| heavy metal ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1231 bits (3184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/870 (74%), Positives = 736/870 (84%), Gaps = 14/870 (1%)
Query: 62 PHIRCRLECMSSCAASFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGGEELS 121
P +R RLEC+SS AASFG + G GG G G GGGGG +S S G G EE+S
Sbjct: 3 PLLRRRLECVSSSAASFGTSSGGGGGGGGEFGSGGGGGGSDGGDAESNSVAGAVGAEEVS 62
Query: 122 ALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQ 181
ALS DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNL TETAIVWPVS+AKV+PNWQ
Sbjct: 63 ALSPDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLATETAIVWPVSEAKVVPNWQ 122
Query: 182 RQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVC 241
++LGEALAKHLTSCGF S+LRD G NFFK+FE KM EKR+RLKES LAVS ALCAVC
Sbjct: 123 KELGEALAKHLTSCGFMSNLRDAGRQNFFKIFEKKMDEKRDRLKESSHQLAVSCALCAVC 182
Query: 242 LVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVG 301
L+GH+SH+ AK WIH FHS GFH+SLSLFTLLGPG QLILDGVKSL KGAPNMNTLVG
Sbjct: 183 LLGHVSHMFAAKPPWIHAFHSVGFHVSLSLFTLLGPGRQLILDGVKSLSKGAPNMNTLVG 242
Query: 302 LGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGIL 361
LGA+SSF VSSLAAL+PKLGWKAFFEEPIMLIAFVLLG+NLEQRAKIKATSDMTGLL +L
Sbjct: 243 LGALSSFAVSSLAALIPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSVL 302
Query: 362 PSKARLLVDNDAKD--SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTG 419
P+KARL+V+ DAKD SI+EVPC+SL VGD IVVLPGDR+PADG V AGRST+DESSFTG
Sbjct: 303 PTKARLVVNGDAKDLGSIVEVPCSSLSVGDKIVVLPGDRVPADGTVTAGRSTIDESSFTG 362
Query: 420 EPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQ 479
EPLPVTK+P S+V+AGSINLNGTLT+EV+RPGGETAMGDIVRLVEEAQSREAPVQRLAD+
Sbjct: 363 EPLPVTKLPGSQVSAGSINLNGTLTIEVKRPGGETAMGDIVRLVEEAQSREAPVQRLADK 422
Query: 480 VSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLS 539
VSGHFTYGV+ +SAATFVFW++FG +LP A+ G P+SLALQLSCSVL + C
Sbjct: 423 VSGHFTYGVMTISAATFVFWSMFGTRILPAALNQGNPISLALQLSCSVL-----VVACPC 477
Query: 540 MCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTS 599
+ VGTSLGATRGLLLRGGN+LEKF+MVN+VVFDKTGTLTIGRP VTKVV
Sbjct: 478 ALGLATPTAVLVGTSLGATRGLLLRGGNVLEKFSMVNSVVFDKTGTLTIGRPAVTKVVPL 537
Query: 600 GSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFI 659
G + +S+ N LSE E+LK AAGVESNT+HP+GKAIVEAA+ + CQNVKV DGTF+
Sbjct: 538 GGMKITDSQLNAT--LSEVELLKLAAGVESNTIHPVGKAIVEAAQAAGCQNVKVTDGTFM 595
Query: 660 EEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLI 719
EEPGSG VA IE++ VS+GT+DW++ + T ++ +L NQS+VYVGVDN LAGLI
Sbjct: 596 EEPGSGAVATIENKVVSIGTLDWIQRYF--TCWLLCIKYHNLKNQSVVYVGVDNTLAGLI 653
Query: 720 YVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKR 779
Y ED+IR+DA VV SLSSQGI VYMLSGDKK++AE+VASLVGIPK+KVLSGVKP+EKKR
Sbjct: 654 YFEDQIREDARQVVESLSSQGINVYMLSGDKKSTAEHVASLVGIPKEKVLSGVKPDEKKR 713
Query: 780 FINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 839
FI+ELQ D+++VAMVGDGINDA ALA SH+GVAMGGGVGAASEV+S+VLMGNRLSQ+L A
Sbjct: 714 FISELQKDQSIVAMVGDGINDAGALAESHVGVAMGGGVGAASEVSSIVLMGNRLSQVLDA 773
Query: 840 LELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMAN 899
LELSRLTMKTVKQNLWWAF YNIVGIPIAAG+LLPV GT+LTPSIAGALMGLSSIGVM N
Sbjct: 774 LELSRLTMKTVKQNLWWAFAYNIVGIPIAAGMLLPVNGTILTPSIAGALMGLSSIGVMTN 833
Query: 900 SLLLRLKFSSKQKASFQA-PSSRVNSNVDS 928
SLLLR KFS KQK + A P++++ +VDS
Sbjct: 834 SLLLRFKFSLKQKKVYGASPNTKI--DVDS 861
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356524832|ref|XP_003531032.1| PREDICTED: putative copper-transporting ATPase PAA1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1191 bits (3081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/811 (72%), Positives = 675/811 (83%), Gaps = 25/811 (3%)
Query: 111 KLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWP 170
KL G +ELSALS DVIILDV GM CGGCAA+VKRILE+QPQVSSASVNLTTETAIVWP
Sbjct: 118 KLVGDASQELSALSPDVIILDVSGMVCGGCAATVKRILENQPQVSSASVNLTTETAIVWP 177
Query: 171 VSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRG 230
VS+AK PNWQ+QLGEALA+HLTSCG+ SSLRD DNF ++FE KM E+ +L+ESGR
Sbjct: 178 VSEAKNAPNWQKQLGEALAEHLTSCGYNSSLRDSTRDNFLQIFERKMEERHRQLRESGRE 237
Query: 231 LAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLF 290
LAVSWALCAVCLVGH SH AKA WIHVFHS GFHLSLSLFTLLGPG QLILDG+KSL
Sbjct: 238 LAVSWALCAVCLVGHFSHFFAAKAPWIHVFHSIGFHLSLSLFTLLGPGRQLILDGLKSLL 297
Query: 291 KGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKA 350
K PNMNTLVGLGA+SSFTVSS AAL+PKLGWKAFFEEPIMLIAFVLLG+NLEQRAKIKA
Sbjct: 298 KRTPNMNTLVGLGALSSFTVSSFAALLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKA 357
Query: 351 TSDMTGLLGILPSKARLLVDNDAKD--SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAG 408
SDMTGLL +LP KARLL++N + S++EVP +SL VGD I+VLPGDRIPADGVVR+G
Sbjct: 358 ASDMTGLLSLLPPKARLLLNNGETEVGSVVEVPSDSLSVGDQIIVLPGDRIPADGVVRSG 417
Query: 409 RSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQS 468
RSTVDESSFTGEPLPVTK+P SEVAAGSINLNGTLT+EV+RPG ETAM +IVRLVEEAQS
Sbjct: 418 RSTVDESSFTGEPLPVTKVPGSEVAAGSINLNGTLTMEVQRPGSETAMANIVRLVEEAQS 477
Query: 469 REAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVL 528
REAPVQRLAD+V+GHFTYGV+A SAATF FW+L+G H+LP A+ G VSLALQL+CSVL
Sbjct: 478 REAPVQRLADKVAGHFTYGVMATSAATFTFWSLYGTHILPPALYQGRAVSLALQLACSVL 537
Query: 529 RKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTI 588
+ C + VGTSLGA RGLLLRGGNILEKFAMV+TVVFDKTGTLT+
Sbjct: 538 -----VVACPCALGLATPTAVLVGTSLGAKRGLLLRGGNILEKFAMVDTVVFDKTGTLTV 592
Query: 589 GRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNC 648
GRPVVT +V + + S Q + LS+ E+L+ AA VE+N+VHP+GKAIV+AA+ +NC
Sbjct: 593 GRPVVTNIVIPICIKNAISSQTEENALSDVEVLRLAAAVETNSVHPVGKAIVDAAQAANC 652
Query: 649 QNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWL-------RSHGVDTSTFQEVEMEDL 701
N KV DGTF+EEPGSG VA I D+KVSVGT++W+ R H + ++
Sbjct: 653 HNAKVKDGTFLEEPGSGAVATIYDKKVSVGTLEWITRYLVCPRIHNIKSN---------- 702
Query: 702 MNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV 761
NQS VYVGVD+ LAGLIY ED IR+DA VV+ LS Q IGVYMLSGDK+N+AE+VASLV
Sbjct: 703 -NQSFVYVGVDDTLAGLIYFEDEIREDARDVVDRLSKQNIGVYMLSGDKRNAAEHVASLV 761
Query: 762 GIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAAS 821
GIPK+KVLS VKP+EKK+FINELQ D N+VAMVGDGINDAAALASSH+G+A+GGGVGAAS
Sbjct: 762 GIPKEKVLSEVKPDEKKKFINELQKDNNIVAMVGDGINDAAALASSHVGIALGGGVGAAS 821
Query: 822 EVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLT 881
EV+S+VLM N+LSQ++ ALELSRLTM T+KQNLWWAF YNIVGIPIAAGVL P+ GT+LT
Sbjct: 822 EVSSIVLMRNQLSQIVDALELSRLTMNTIKQNLWWAFIYNIVGIPIAAGVLFPINGTVLT 881
Query: 882 PSIAGALMGLSSIGVMANSLLLRLKFSSKQK 912
PSIAGALMGLSSIGVM NSLLLR KFSSKQK
Sbjct: 882 PSIAGALMGLSSIGVMTNSLLLRFKFSSKQK 912
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449438779|ref|XP_004137165.1| PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1184 bits (3063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/812 (71%), Positives = 684/812 (84%), Gaps = 10/812 (1%)
Query: 110 SKLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVW 169
+KL EE+S+L + VIILDVGGMTCGGCAASVKRILE+QPQVSSASVNLTTETA++W
Sbjct: 120 NKLVSGSAEEISSLLASVIILDVGGMTCGGCAASVKRILENQPQVSSASVNLTTETAVIW 179
Query: 170 PVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGR 229
PV + K P+ ++LGE LA HLT CGF SSLRD G DN F VFE KM EKRNRLKESGR
Sbjct: 180 PVPEVKDSPHRVKKLGETLANHLTRCGFASSLRDSGRDNIFMVFEKKMEEKRNRLKESGR 239
Query: 230 GLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSL 289
L SWALCAVCL+GH+SH GAKASWIH FH+T FHLSL LFTLLGPG QLI+DG+KSL
Sbjct: 240 NLVFSWALCAVCLLGHISHFFGAKASWIHTFHTTQFHLSLCLFTLLGPGRQLIIDGMKSL 299
Query: 290 FKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIK 349
KGAPNMNTLVGLGA+SSF+VSSLAAL+PKLGWKAFFEEP+MLIAFVLLG+NLEQRAKI+
Sbjct: 300 VKGAPNMNTLVGLGALSSFSVSSLAALMPKLGWKAFFEEPVMLIAFVLLGRNLEQRAKIR 359
Query: 350 ATSDMTGLLGILPSKARLLVDNDAK-DSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAG 408
A SDMTGLL ILPSKARL+VD D + S +E+PC+SL +GD ++VLPGDRIPADG+V++G
Sbjct: 360 AASDMTGLLSILPSKARLVVDGDTELSSTVEIPCSSLSIGDEVIVLPGDRIPADGIVKSG 419
Query: 409 RSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQS 468
RS VDESSFTGEPLPVTK+P S+VAAG+INLNGTLTV+V R GG+TAMGDI+RLVEEAQS
Sbjct: 420 RSIVDESSFTGEPLPVTKLPGSQVAAGTINLNGTLTVKVHRQGGDTAMGDIIRLVEEAQS 479
Query: 469 REAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVL 528
REAPVQRLAD+VSGHFTYGV+ LSAATF+FW+ FG+ +LP A +G VSLALQLSCSVL
Sbjct: 480 REAPVQRLADKVSGHFTYGVMVLSAATFIFWSQFGSRILPAAFYHGSSVSLALQLSCSVL 539
Query: 529 RKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTI 588
+ C + VGTSLGAT+GLLLRGGNILE+F+MV+TVVFDKTGTLT+
Sbjct: 540 -----VVACPCALGLATPTAMLVGTSLGATKGLLLRGGNILEQFSMVDTVVFDKTGTLTV 594
Query: 589 GRPVVTKV-VTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSN 647
GRPVVTKV TS + +++ N SE EILKFAA VESNTVHP+GKAIVEAA N
Sbjct: 595 GRPVVTKVFATSRYERNVDTQTNSHGNYSENEILKFAAAVESNTVHPVGKAIVEAARAVN 654
Query: 648 CQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQE---VEMEDLMNQ 704
++KV +GTF+EEPGSG VA +E+R +S+GT+DW++ HGV FQE ++ DL
Sbjct: 655 GHSLKVVEGTFVEEPGSGAVATVENRIISIGTLDWVQRHGVIVDDFQETDDLKAHDLKAH 714
Query: 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764
S+VYVG+DN LAG IY ED IR+DA HVV++LS QGI Y+LSGDK+++AEY+ASLVGIP
Sbjct: 715 SVVYVGIDNSLAGCIYYEDGIREDARHVVDTLSRQGINTYILSGDKRSNAEYIASLVGIP 774
Query: 765 KDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVA 824
K+KV SGVKP+EKK+FI+ELQ + N+VAMVGDGINDAAALA++ IG+AMGGGVGAASEV+
Sbjct: 775 KEKVRSGVKPHEKKKFISELQENNNIVAMVGDGINDAAALATADIGIAMGGGVGAASEVS 834
Query: 825 SVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSI 884
+VLMGNRLSQLL ALELSRLTMKTVKQNLWWAFGYNIVGIP+AAGVLLP+TGT+LTPSI
Sbjct: 835 PIVLMGNRLSQLLDALELSRLTMKTVKQNLWWAFGYNIVGIPVAAGVLLPITGTILTPSI 894
Query: 885 AGALMGLSSIGVMANSLLLRLKFSSKQKASFQ 916
AGALMGLSS+GVMANSLLLR++FS +K S +
Sbjct: 895 AGALMGLSSVGVMANSLLLRIRFSQNRKKSLE 926
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42573157|ref|NP_974675.1| putative copper-transporting ATPase PAA1 [Arabidopsis thaliana] gi|12643855|sp|Q9SZC9.1|HMA6_ARATH RecName: Full=Copper-transporting ATPase PAA1, chloroplastic; AltName: Full=Protein HEAVY METAL ATPASE 6; AltName: Full=Protein glucose insensitive root 1; Flags: Precursor gi|4490319|emb|CAB38810.1| metal-transporting P-type ATPase [Arabidopsis thaliana] gi|7270300|emb|CAB80069.1| metal-transporting P-type ATPase [Arabidopsis thaliana] gi|110737997|dbj|BAF00934.1| metal-transporting P-type ATPase [Arabidopsis thaliana] gi|332660839|gb|AEE86239.1| putative copper-transporting ATPase PAA1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/938 (65%), Positives = 729/938 (77%), Gaps = 37/938 (3%)
Query: 3 SALSLSTTTTTLTLFTISKA--RHFLKRIPMAYRIQPL----TSISTQTLPFASLSR--- 53
+A++ S+ +L L TISKA RHF A + PL S S + L SR
Sbjct: 14 TAMARSSGGPSLPLLTISKALNRHFTG----ARHLHPLLLARCSPSVRRLGGFHGSRFTS 69
Query: 54 -----RKFSAVLPPHIRCRLECMSSCAASFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDS 108
R A + P IR RLEC+SS + SF + G GG GG GGG GG
Sbjct: 70 SNSALRSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGD 129
Query: 109 KS-KLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAI 167
KLG + +S SSD+IILDVGGMTCGGC+ASVK+ILESQPQV+SASVNLTTETAI
Sbjct: 130 SKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAI 189
Query: 168 VWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKES 227
VWPV +AK +P+WQ+ LGE LA HLT+CGF+S+ RD+ T+NFFKVFETK +K+ RLKES
Sbjct: 190 VWPVPEAKSVPDWQKSLGETLANHLTNCGFQSTPRDLVTENFFKVFETKTKDKQARLKES 249
Query: 228 GRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVK 287
GR LAVSWALCAVCLVGHL+H LG A WIH HSTGFH+SL L TLLGPG +L+LDG+K
Sbjct: 250 GRELAVSWALCAVCLVGHLTHFLGVNAPWIHAIHSTGFHVSLCLITLLGPGRKLVLDGIK 309
Query: 288 SLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAK 347
SL KG+PNMNTLVGLGA+SSF+VSSLAA++PKLGWK FFEEP+MLIAFVLLG+NLEQRAK
Sbjct: 310 SLLKGSPNMNTLVGLGALSSFSVSSLAAMIPKLGWKTFFEEPVMLIAFVLLGRNLEQRAK 369
Query: 348 IKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA 407
IKATSDMTGLL +LPSKARLL+D D ++S +EVPCNSL VGD +V+LPGDR+PADGVV++
Sbjct: 370 IKATSDMTGLLSVLPSKARLLLDGDLQNSTVEVPCNSLSVGDLVVILPGDRVPADGVVKS 429
Query: 408 GRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQ 467
GRST+DESSFTGEPLPVTK S+VAAGSINLNGTLTVEV R GGETA+GDI+RLVEEAQ
Sbjct: 430 GRSTIDESSFTGEPLPVTKESGSQVAAGSINLNGTLTVEVHRSGGETAVGDIIRLVEEAQ 489
Query: 468 SREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSV 527
SREAPVQ+L D+V+G FTYGV+ALSAATF FWNLFGAHVLP+A+ G P+SLALQLSCSV
Sbjct: 490 SREAPVQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSALHNGSPMSLALQLSCSV 549
Query: 528 LRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLT 587
L + C + VGTSLGA RGLLLRGG+ILEKF++V+TVVFDKTGTLT
Sbjct: 550 L-----VVACPCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSLVDTVVFDKTGTLT 604
Query: 588 IGRPVVTKVVTSGSLTDPNSKQNPIHPL----SETEILKFAAGVESNTVHPIGKAIVEAA 643
G PVVT+V+ +NP H L SE E+L AA VESNT HP+GKAIV+AA
Sbjct: 605 KGHPVVTEVII---------PENPRHNLNDTWSEVEVLMLAAAVESNTTHPVGKAIVKAA 655
Query: 644 EFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMN 703
NCQ +K DGTF EEPGSG VAI+ +++V+VGT++W++ HG ++ +E ++ N
Sbjct: 656 RARNCQTMKAEDGTFTEEPGSGAVAIVNNKRVTVGTLEWVKRHGATGNSLLALEEHEINN 715
Query: 704 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763
QS+VY+GVDN LA +I ED++R+DAA VV +L+ QGI VYMLSGDK+N+A YVAS+VGI
Sbjct: 716 QSVVYIGVDNTLAAVIRFEDKVREDAAQVVENLTRQGIDVYMLSGDKRNAANYVASVVGI 775
Query: 764 PKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV 823
++V++GVKP EKK FINELQ ++ +VAMVGDGINDAAALASS++GVAMGGG GAASEV
Sbjct: 776 NHERVIAGVKPAEKKNFINELQKNKKIVAMVGDGINDAAALASSNVGVAMGGGAGAASEV 835
Query: 824 ASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPS 883
+ VVLMGNRL+QLL A+ELSR TMKTVKQNLWWAFGYNIVGIPIAAGVLLP+TGTMLTPS
Sbjct: 836 SPVVLMGNRLTQLLDAMELSRQTMKTVKQNLWWAFGYNIVGIPIAAGVLLPLTGTMLTPS 895
Query: 884 IAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSR 921
+AGALMG+SS+GVM NSLLLR +F S + P +
Sbjct: 896 MAGALMGVSSLGVMTNSLLLRYRFFSNRNDKNVKPEPK 933
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|3549654|emb|CAA20565.1| metal-transporting P-type ATPase (fragment) [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1136 bits (2939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/815 (69%), Positives = 675/815 (82%), Gaps = 18/815 (2%)
Query: 111 KLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWP 170
KLG + +S SSD+IILDVGGMTCGGC+ASVK+ILESQPQV+SASVNLTTETAIVWP
Sbjct: 54 KLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVWP 113
Query: 171 VSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRG 230
V +AK +P+WQ+ LGE LA HLT+CGF+S+ RD+ T+NFFKVFETK +K+ RLKESGR
Sbjct: 114 VPEAKSVPDWQKSLGETLANHLTNCGFQSTPRDLVTENFFKVFETKTKDKQARLKESGRE 173
Query: 231 LAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLF 290
LAVSWALCAVCLVGHL+H LG A WIH HSTGFH+SL L TLLGPG +L+LDG+KSL
Sbjct: 174 LAVSWALCAVCLVGHLTHFLGVNAPWIHAIHSTGFHVSLCLITLLGPGRKLVLDGIKSLL 233
Query: 291 KGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKA 350
KG+PNMNTLVGLGA+SSF+VSSLAA++PKLGWK FFEEP+MLIAFVLLG+NLEQRAKIKA
Sbjct: 234 KGSPNMNTLVGLGALSSFSVSSLAAMIPKLGWKTFFEEPVMLIAFVLLGRNLEQRAKIKA 293
Query: 351 TSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRS 410
TSDMTGLL +LPSKARLL+D D ++S +EVPCNSL VGD +V+LPGDR+PADGVV++GRS
Sbjct: 294 TSDMTGLLSVLPSKARLLLDGDLQNSTVEVPCNSLSVGDLVVILPGDRVPADGVVKSGRS 353
Query: 411 TVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSRE 470
T+DESSFTGEPLPVTK S+VAAGSINLNGTLTVEV R GGETA+GDI+RLVEEAQSRE
Sbjct: 354 TIDESSFTGEPLPVTKESGSQVAAGSINLNGTLTVEVHRSGGETAVGDIIRLVEEAQSRE 413
Query: 471 APVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRK 530
APVQ+L D+V+G FTYGV+ALSAATF FWNLFGAHVLP+A+ G P+SLALQLSCSVL
Sbjct: 414 APVQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSALHNGSPMSLALQLSCSVL-- 471
Query: 531 ETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGR 590
+ C + VGTSLGA RGLLLRGG+ILEKF++V+TVVFDKTGTLT G
Sbjct: 472 ---VVACPCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSLVDTVVFDKTGTLTKGH 528
Query: 591 PVVTKVVTSGSLTDPNSKQNPIHPL----SETEILKFAAGVESNTVHPIGKAIVEAAEFS 646
PVVT+V+ +NP H L SE E+L AA VESNT HP+GKAIV+AA
Sbjct: 529 PVVTEVIIP---------ENPRHNLNDTWSEVEVLMLAAAVESNTTHPVGKAIVKAARAR 579
Query: 647 NCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSL 706
NCQ +K DGTF EEPGSG VAI+ +++V+VGT++W++ HG ++ +E ++ NQS+
Sbjct: 580 NCQTMKAEDGTFTEEPGSGAVAIVNNKRVTVGTLEWVKRHGATGNSLLALEEHEINNQSV 639
Query: 707 VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD 766
VY+GVDN LA +I ED++R+DAA VV +L+ QGI VYMLSGDK+N+A YVAS+VGI +
Sbjct: 640 VYIGVDNTLAAVIRFEDKVREDAAQVVENLTRQGIDVYMLSGDKRNAANYVASVVGINHE 699
Query: 767 KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASV 826
+V++GVKP EKK FINELQ ++ +VAMVGDGINDAAALASS++GVAMGGG GAASEV+ V
Sbjct: 700 RVIAGVKPAEKKNFINELQKNKKIVAMVGDGINDAAALASSNVGVAMGGGAGAASEVSPV 759
Query: 827 VLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAG 886
VLMGNRL+QLL A+ELSR TMKTVKQNLWWAFGYNIVGIPIAAGVLLP+TGTMLTPS+AG
Sbjct: 760 VLMGNRLTQLLDAMELSRQTMKTVKQNLWWAFGYNIVGIPIAAGVLLPLTGTMLTPSMAG 819
Query: 887 ALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSR 921
ALMG+SS+GVM NSLLLR +F S + P +
Sbjct: 820 ALMGVSSLGVMTNSLLLRYRFFSNRNDKNVKPEPK 854
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42573159|ref|NP_974676.1| putative copper-transporting ATPase PAA1 [Arabidopsis thaliana] gi|332660841|gb|AEE86241.1| putative copper-transporting ATPase PAA1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1136 bits (2938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/938 (65%), Positives = 728/938 (77%), Gaps = 37/938 (3%)
Query: 3 SALSLSTTTTTLTLFTISKA--RHFLKRIPMAYRIQPL----TSISTQTLPFASLSR--- 53
+A++ S+ +L L TISKA RHF A + PL S S + L SR
Sbjct: 14 TAMARSSGGPSLPLLTISKALNRHFTG----ARHLHPLLLARCSPSVRRLGGFHGSRFTS 69
Query: 54 -----RKFSAVLPPHIRCRLECMSSCAASFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDS 108
R A + P IR RLEC+SS + SF + G GG GG GGG GG
Sbjct: 70 SNSALRSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGD 129
Query: 109 KS-KLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAI 167
KLG + +S SSD+IILDVGGMTCGGC+ASVK+ILESQPQV+SASVNLTTETAI
Sbjct: 130 SKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAI 189
Query: 168 VWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKES 227
VWPV +AK +P+WQ+ LGE LA HLT+CGF+S+ RD+ T+NFFKVFETK +K+ RLKES
Sbjct: 190 VWPVPEAKSVPDWQKSLGETLANHLTNCGFQSTPRDLVTENFFKVFETKTKDKQARLKES 249
Query: 228 GRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVK 287
GR LAVSWALCAVCLVGHL+H LG A WIH HSTGFH+SL L TLLGPG +L+LDG+K
Sbjct: 250 GRELAVSWALCAVCLVGHLTHFLGVNAPWIHAIHSTGFHVSLCLITLLGPGRKLVLDGIK 309
Query: 288 SLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAK 347
SL KG+PNMNTLVGLGA+SSF+VSSLAA++PKLGWK FFEEP+MLIAFVLLG+NLEQRAK
Sbjct: 310 SLLKGSPNMNTLVGLGALSSFSVSSLAAMIPKLGWKTFFEEPVMLIAFVLLGRNLEQRAK 369
Query: 348 IKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA 407
IKATSDMTGLL +LPSKARLL+D D ++S +EVPCNSL VGD +V+LPGDR+PADGVV++
Sbjct: 370 IKATSDMTGLLSVLPSKARLLLDGDLQNSTVEVPCNSLSVGDLVVILPGDRVPADGVVKS 429
Query: 408 GRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQ 467
GRST+DESSFTGEPLPVTK S+VAAGSINLNGTLTVEV R GGETA+GDI+RLVEEAQ
Sbjct: 430 GRSTIDESSFTGEPLPVTKESGSQVAAGSINLNGTLTVEVHRSGGETAVGDIIRLVEEAQ 489
Query: 468 SREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSV 527
SREAPVQ+L D+V+G FTYGV+ALSAATF FWNLFGAHVLP+A+ G P+SLALQLSCSV
Sbjct: 490 SREAPVQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSALHNGSPMSLALQLSCSV 549
Query: 528 LRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLT 587
L + C + VGTSLGA RGLLLRGG+ILEKF++V+TVVFDKTGTLT
Sbjct: 550 L-----VVACPCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSLVDTVVFDKTGTLT 604
Query: 588 IGRPVVTKVVTSGSLTDPNSKQNPIHPL----SETEILKFAAGVESNTVHPIGKAIVEAA 643
G PVVT+V+ +NP H L SE E+L AA VESNT HP+GKAIV+AA
Sbjct: 605 KGHPVVTEVII---------PENPRHNLNDTWSEVEVLMLAAAVESNTTHPVGKAIVKAA 655
Query: 644 EFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMN 703
NCQ +K DGTF EEPGSG VAI+ +++V+VGT++W++ HG ++ +E ++ N
Sbjct: 656 RARNCQTMKAEDGTFTEEPGSGAVAIVNNKRVTVGTLEWVKRHGATGNSLLALEEHEINN 715
Query: 704 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763
QS+VY+GVDN LA +I ED++R+DAA VV +L+ QGI VYMLSGDK+N+A YVAS+VGI
Sbjct: 716 QSVVYIGVDNTLAAVIRFEDKVREDAAQVVENLTRQGIDVYMLSGDKRNAANYVASVVGI 775
Query: 764 PKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV 823
++V++GVKP EKK FINELQ ++ +VAMVGDGINDAAALASS++GVAMGGG GAASEV
Sbjct: 776 NHERVIAGVKPAEKKNFINELQKNKKIVAMVGDGINDAAALASSNVGVAMGGGAGAASEV 835
Query: 824 ASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPS 883
+ VVLMGNRL+QLL A+ELSR TMKTVKQNLWWAFGYNIV IPIAAGVLLP+TGTMLTPS
Sbjct: 836 SPVVLMGNRLTQLLDAMELSRQTMKTVKQNLWWAFGYNIVRIPIAAGVLLPLTGTMLTPS 895
Query: 884 IAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSR 921
+AGALMG+SS+GVM NSLLLR +F S + P +
Sbjct: 896 MAGALMGVSSLGVMTNSLLLRYRFFSNRNDKNVKPEPK 933
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297802654|ref|XP_002869211.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297315047|gb|EFH45470.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1135 bits (2937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/932 (65%), Positives = 728/932 (78%), Gaps = 34/932 (3%)
Query: 3 SALSLSTTTTTLTLFTISKA--RHF----------LKRIPMAYRIQPLTSISTQTLPFAS 50
+A++ S+ +L L TISKA RHF L R A R L +L ++
Sbjct: 14 TAMARSSGGPSLPLLTISKALNRHFSGARHLHPLLLARCSPAVR--RLGGFHGSSLTSSN 71
Query: 51 LSRRKFSAVLPPHIRCRLECMSSCAASFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKS 110
+ R A + P IR RL+C+S + SF + G GG GG GG GG
Sbjct: 72 SALRSLGAAVLPVIRHRLQCLSISSPSFRSISSGGGSGFGGYNGGSGGAGGGGSESGDSK 131
Query: 111 -KLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVW 169
KLG + +S SSD+IILDVGGMTCGGC+ASVK+ILESQPQV+SASVNLTTETAIVW
Sbjct: 132 SKLGAGTNDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVW 191
Query: 170 PVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGR 229
PV +AK +P+WQ+ LGE LA HLT+CGF+S+ RD+ T+NFFKVFETK +K+ RLKESGR
Sbjct: 192 PVPEAKSVPDWQKSLGETLANHLTNCGFQSTPRDLVTENFFKVFETKTKDKQARLKESGR 251
Query: 230 GLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSL 289
LAVSWALCAVCLVGHL+H LG A WIH HSTGFH+SL L TLLGPG +L+LDG+KSL
Sbjct: 252 ELAVSWALCAVCLVGHLTHFLGVNAPWIHAIHSTGFHVSLCLITLLGPGRKLVLDGIKSL 311
Query: 290 FKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIK 349
KG+PNMNTLVGLGA+SSF+VSSLAA++PKLGWK FFEEP+MLIAFVLLG+NLEQRAKIK
Sbjct: 312 LKGSPNMNTLVGLGALSSFSVSSLAAMIPKLGWKTFFEEPVMLIAFVLLGRNLEQRAKIK 371
Query: 350 ATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR 409
ATSDMTGLL +LPSKARLL+D D ++S +EVPCNSL VGD +V+LPGDR+PADGVV++GR
Sbjct: 372 ATSDMTGLLSVLPSKARLLLDGDLQNSTVEVPCNSLSVGDLVVILPGDRVPADGVVKSGR 431
Query: 410 STVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSR 469
ST+DESSFTGEPLPVTK S+VAAGSINLNGTLTVEV R GGETA+GDI+RLVEEAQSR
Sbjct: 432 STIDESSFTGEPLPVTKESGSQVAAGSINLNGTLTVEVHRSGGETAVGDIIRLVEEAQSR 491
Query: 470 EAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLR 529
EAPVQ+L D+V+G FTYGV+ALSAATF FWNLFGAHVLP+A+ G P+SLALQLSCSVL
Sbjct: 492 EAPVQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSALHNGSPMSLALQLSCSVL- 550
Query: 530 KETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIG 589
+ C + VGTSLGA RGLLLRGG+ILEKF+ V+TVVFDKTGTLT G
Sbjct: 551 ----VVACPCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSSVDTVVFDKTGTLTKG 606
Query: 590 RPVVTKVVTSGSLTDPNSKQNPIHPL----SETEILKFAAGVESNTVHPIGKAIVEAAEF 645
PVVT+V+ +NP H L SE E+L AA VESNT HP+GKAIV+AA
Sbjct: 607 HPVVTEVII---------PENPRHNLNDTWSEVEVLMLAAAVESNTTHPVGKAIVKAARA 657
Query: 646 SNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQS 705
NCQ +K DGTF EEPGSG VAI+ +++V+VGT++W++ HG ++ +E +L NQS
Sbjct: 658 CNCQTMKAEDGTFTEEPGSGAVAIVNNKRVTVGTLEWVQRHGATGNSTLALEEHELNNQS 717
Query: 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK 765
+VY+GVDN LA +I ED++R+DAA VV +L+ QGI VYMLSGDK+N+A YVAS+VGI +
Sbjct: 718 VVYIGVDNTLAAVIRFEDKVREDAAQVVENLTRQGIDVYMLSGDKRNAANYVASVVGINQ 777
Query: 766 DKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVAS 825
++V++GVKP EKK FINELQ ++ +VAMVGDGINDAAALASS +GVAMGGG GAASEV+
Sbjct: 778 ERVIAGVKPAEKKTFINELQKNKKIVAMVGDGINDAAALASSDVGVAMGGGAGAASEVSP 837
Query: 826 VVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIA 885
VVLMGNRL+QLL A+ELSR TMKTVKQNLWWAFGYNIVGIPIAAGVLLP+TGTMLTPS+A
Sbjct: 838 VVLMGNRLTQLLDAMELSRQTMKTVKQNLWWAFGYNIVGIPIAAGVLLPLTGTMLTPSMA 897
Query: 886 GALMGLSSIGVMANSLLLRLK-FSSKQKASFQ 916
GALMG+SS+GVM NSLLLR + FS++ +F+
Sbjct: 898 GALMGVSSLGVMTNSLLLRYRFFSNRNDKNFK 929
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 937 | ||||||
| TAIR|locus:2119265 | 949 | PAA1 "P-type ATP-ase 1" [Arabi | 0.905 | 0.893 | 0.632 | 1.1e-284 | |
| TAIR|locus:504956435 | 883 | PAA2 "P-type ATPase of Arabido | 0.821 | 0.872 | 0.374 | 1.6e-125 | |
| TIGR_CMR|CHY_0940 | 838 | CHY_0940 "copper-translocating | 0.790 | 0.884 | 0.312 | 4.3e-94 | |
| TAIR|locus:2031361 | 995 | HMA5 "heavy metal atpase 5" [A | 0.644 | 0.607 | 0.352 | 1.9e-87 | |
| UNIPROTKB|P77894 | 770 | ctpV "Probable copper-exportin | 0.332 | 0.405 | 0.391 | 2.9e-87 | |
| UNIPROTKB|P73241 | 745 | pacS "Cation-transporting ATPa | 0.344 | 0.433 | 0.340 | 7.9e-87 | |
| TIGR_CMR|SPO_0794 | 828 | SPO_0794 "copper-translocating | 0.464 | 0.525 | 0.312 | 2.3e-86 | |
| DICTYBASE|DDB_G0284141 | 985 | atp7a "copper-transporting ATP | 0.584 | 0.556 | 0.286 | 3.2e-84 | |
| TIGR_CMR|CBU_1507 | 742 | CBU_1507 "copper-translocating | 0.344 | 0.435 | 0.337 | 7.2e-83 | |
| POMBASE|SPBC29A3.01 | 904 | ccc2 "copper transporting ATPa | 0.726 | 0.753 | 0.315 | 1.5e-81 |
| TAIR|locus:2119265 PAA1 "P-type ATP-ase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2735 (967.8 bits), Expect = 1.1e-284, P = 1.1e-284
Identities = 543/859 (63%), Positives = 651/859 (75%)
Query: 54 RKFSAVLPPHIRCRLECMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 113
R A + P IR RLEC+
Sbjct: 75 RSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGDSKSKL 134
Query: 114 XXXXEE-LSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVS 172
+ +S SSD+IILDVGGMTCGGC+ASVK+ILESQPQV+SASVNLTTETAIVWPV
Sbjct: 135 GANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVWPVP 194
Query: 173 KAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLA 232
+AK +P+WQ+ LGE LA HLT+CGF+S+ RD+ T+NFFKVFETK +K+ RLKESGR LA
Sbjct: 195 EAKSVPDWQKSLGETLANHLTNCGFQSTPRDLVTENFFKVFETKTKDKQARLKESGRELA 254
Query: 233 VSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKG 292
VSWALCAVCLVGHL+H LG A WIH HSTGFH+SL L TLLGPG +L+LDG+KSL KG
Sbjct: 255 VSWALCAVCLVGHLTHFLGVNAPWIHAIHSTGFHVSLCLITLLGPGRKLVLDGIKSLLKG 314
Query: 293 APNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATS 352
+PNMNTLVGLGA+SSF+VSSLAA++PKLGWK FFEEP+MLIAFVLLG+NLEQRAKIKATS
Sbjct: 315 SPNMNTLVGLGALSSFSVSSLAAMIPKLGWKTFFEEPVMLIAFVLLGRNLEQRAKIKATS 374
Query: 353 DMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTV 412
DMTGLL +LPSKARLL+D D ++S +EVPCNSL VGD +V+LPGDR+PADGVV++GRST+
Sbjct: 375 DMTGLLSVLPSKARLLLDGDLQNSTVEVPCNSLSVGDLVVILPGDRVPADGVVKSGRSTI 434
Query: 413 DESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAP 472
DESSFTGEPLPVTK S+VAAGSINLNGTLTVEV R GGETA+GDI+RLVEEAQSREAP
Sbjct: 435 DESSFTGEPLPVTKESGSQVAAGSINLNGTLTVEVHRSGGETAVGDIIRLVEEAQSREAP 494
Query: 473 VQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKET 532
VQ+L D+V+G FTYGV+ALSAATF FWNLFGAHVLP+A+ G P+SLALQLSCSVL
Sbjct: 495 VQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSALHNGSPMSLALQLSCSVL--VV 552
Query: 533 SICCCLSMCPWLSHAYSYVXXXXXXXXXXXXXXXNILEKFAMVNTVVFDKTGTLTIGRPV 592
+ C L + + V +ILEKF++V+TVVFDKTGTLT G PV
Sbjct: 553 ACPCALGLA---TPTAMLVGTSLGARRGLLLRGGDILEKFSLVDTVVFDKTGTLTKGHPV 609
Query: 593 VTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVK 652
VT+V+ N + N SE E+L AA VESNT HP+GKAIV+AA NCQ +K
Sbjct: 610 VTEVIIP-----ENPRHNLNDTWSEVEVLMLAAAVESNTTHPVGKAIVKAARARNCQTMK 664
Query: 653 VADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVD 712
DGTF EEPGSG VAI+ +++V+VGT++W++ HG ++ +E ++ NQS+VY+GVD
Sbjct: 665 AEDGTFTEEPGSGAVAIVNNKRVTVGTLEWVKRHGATGNSLLALEEHEINNQSVVYIGVD 724
Query: 713 NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV 772
N LA +I ED++R+DAA VV +L+ QGI VYMLSGDK+N+A YVAS+VGI ++V++GV
Sbjct: 725 NTLAAVIRFEDKVREDAAQVVENLTRQGIDVYMLSGDKRNAANYVASVVGINHERVIAGV 784
Query: 773 KPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIXXXXXXXXXXXXXXXXXXLMGNR 832
KP EKK FINELQ ++ +VAMVGDGINDAAALASS++ LMGNR
Sbjct: 785 KPAEKKNFINELQKNKKIVAMVGDGINDAAALASSNVGVAMGGGAGAASEVSPVVLMGNR 844
Query: 833 LSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLS 892
L+QLL A+ELSR TMKTVKQNLWWAFGYNIVGIPIAAGVLLP+TGTMLTPS+AGALMG+S
Sbjct: 845 LTQLLDAMELSRQTMKTVKQNLWWAFGYNIVGIPIAAGVLLPLTGTMLTPSMAGALMGVS 904
Query: 893 SIGVMANSLLLRLKFSSKQ 911
S+GVM NSLLLR +F S +
Sbjct: 905 SLGVMTNSLLLRYRFFSNR 923
|
|
| TAIR|locus:504956435 PAA2 "P-type ATPase of Arabidopsis 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1233 (439.1 bits), Expect = 1.6e-125, P = 1.6e-125
Identities = 313/836 (37%), Positives = 457/836 (54%)
Query: 121 SALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNW 180
S S I+LDV GM CGGC A VK +L S +V+SA VN+ TETA V + +V +
Sbjct: 71 SITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADT 130
Query: 181 QRQLGEALA-------KHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAV 233
L + L + ++ G +++ E + + RNR+ + +A
Sbjct: 131 AESLAKRLTESGFEAKRRVSGMGVAENVKKW--KEMVSKKEDLLVKSRNRVAFAWTLVA- 187
Query: 234 SWALCAVCLVGHLSHILGAKAS----WIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSL 289
LC H+ H LG + W + H++ L++ LLGPG +L+ DG+K+
Sbjct: 188 ---LCCGSHTSHILHSLGIHIAHGGIW-DLLHNSYVKGGLAVGALLGPGRELLFDGIKAF 243
Query: 290 FKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKA-FFEEPIMLIAFVLLGKNLEQRAKI 348
K +PNMN+LVGLG++++F++S ++ + P+L W A FF+EP+ML+ FVLLG++LE+RAK+
Sbjct: 244 GKRSPNMNSLVGLGSMAAFSISLISLVNPELEWDASFFDEPVMLLGFVLLGRSLEERAKL 303
Query: 349 KATSDMTGLLGILPSKARLLV---DND-------AKDSI-IEVPCNSLHVGDHIVVLPGD 397
+A++DM LL ++ +++RL++ DN+ + DSI I V + + VGD ++VLPG+
Sbjct: 304 QASTDMNELLSLISTQSRLVITSSDNNTPVDSVLSSDSICINVSVDDIRVGDSLLVLPGE 363
Query: 398 RIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMG 457
P DG V AGRS VDES TGE LPV K V+AG+IN +G L ++ G + +
Sbjct: 364 TFPVDGSVLAGRSVVDESMLTGESLPVFKEEGCSVSAGTINWDGPLRIKASSTGSNSTIS 423
Query: 458 DIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAI--QYGG 515
IVR+VE+AQ APVQRLAD ++G F Y +++LSA TF FW G+H+ P + G
Sbjct: 424 KIVRMVEDAQGNAAPVQRLADAIAGPFVYTIMSLSAMTFAFWYYVGSHIFPDVLLNDIAG 483
Query: 516 PVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVXXXXXXXXXXXXXXXNILEKFAMV 575
P AL LS L + + C + + ++LE+ A +
Sbjct: 484 PDGDALALSLK-LAVDVLVVSCPCALGLATPTAILIGTSLGAKRGYLIRGGDVLERLASI 542
Query: 576 NTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPI 635
+ V DKTGTLT GRPVV+ V + G E E+LK AA VE HPI
Sbjct: 543 DCVALDKTGTLTEGRPVVSGVASLG--------------YEEQEVLKMAAAVEKTATHPI 588
Query: 636 GKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQE 695
KAIV AE N + + G + EPG GT+A I+ R V+VG+++W+ + + +
Sbjct: 589 AKAIVNEAESLNLKTPETR-GQ-LTEPGFGTLAEIDGRFVAVGSLEWVSDRFLKKNDSSD 646
Query: 696 -VEMEDLMNQSL-------------VYVGVDNM-LAGLIYVEDRIRDDAAHVVNSLSSQG 740
V++E L++ L VYVG + + G I + D +R DA V L +G
Sbjct: 647 MVKLESLLDHKLSNTSSTSRYSKTVVYVGREGEGIIGAIAISDCLRQDAEFTVARLQEKG 706
Query: 741 IGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGIND 800
I +LSGD++ + VA VGI + + P +K FI+ LQ+ + VAMVGDGIND
Sbjct: 707 IKTVLLSGDREGAVATVAKNVGIKSESTNYSLSPEKKFEFISNLQSSGHRVAMVGDGIND 766
Query: 801 AAALASSH--IXXXXXXXXXXXXXXXXXXLMGNRLSQLLVALELSRLTMKTVKQNLWWAF 858
A +LA + I L+ N+LS ++ AL L++ TM V QNL WA
Sbjct: 767 APSLAQADVGIALKIEAQENAASNAASVILVRNKLSHVVDALSLAQATMSKVYQNLAWAI 826
Query: 859 GYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKAS 914
YN++ IPIAAGVLLP +TPS++G LM LSSI V++NSLLL+L S K S
Sbjct: 827 AYNVISIPIAAGVLLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQLHKSETSKNS 882
|
|
| TIGR_CMR|CHY_0940 CHY_0940 "copper-translocating P-type ATPase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 892 (319.1 bits), Expect = 4.3e-94, Sum P(2) = 4.3e-94
Identities = 249/798 (31%), Positives = 391/798 (48%)
Query: 132 VGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKH 191
V GM+C C V++ V A VNL + V KA E +
Sbjct: 80 VEGMSCAACVQKVEKAARGFAGVLDAVVNLPAQQLTV----KAY----------EGV--- 122
Query: 192 LTSCGFKSSLRDMGTDNF-FKVFETKMHEKRNRLKESGRG---LAVSWALCAVCLVGHLS 247
L K +R++G + F F+ + EK R KE + V W L + ++G +
Sbjct: 123 LDVGRLKREIRELGYEIFNFEEIDPLAREKEAREKEIRHQRLKMIVVWPLAILAMIGTMR 182
Query: 248 HILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAVSS 307
H+ K + F ++++ +L G++ + + L +G +MN L G S+
Sbjct: 183 HLWIFKYFVPEFLGNNYFLMAITTPVVLYGGYEFFVKSYQGLKRGVTDMNLLYATGIGSA 242
Query: 308 FTVSSLAALVPKLGW---KA-FFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPS 363
+ ++ + L P G+ KA FFE +L AF++LG+ LE + + + + L+ + P
Sbjct: 243 YLIAVINTLFPNAGFGGPKATFFESAALLTAFIILGRYLEALTRGRTSEALRKLISLKPK 302
Query: 364 KARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLP 423
AR+L++ + K E+P + + +GD +VV PG+ IP DGVV G ++VDES TGE LP
Sbjct: 303 TARVLINGEEK----EIPADEVEIGDLVVVRPGETIPVDGVVERGTASVDESMLTGESLP 358
Query: 424 VTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGH 483
V K S V GSI G LTV+ R G ET++ I++L+EEAQ+ +AP+Q+LAD V+G+
Sbjct: 359 VDKGEGSMVLGGSIIKTGALTVKATRVGKETSLSRIIKLMEEAQTTKAPLQKLADVVAGN 418
Query: 484 FTYGVIALSAATFVFWNLFG--AHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMC 541
F GV L+ TF FW +G A+ P P +A ++ S+ + C
Sbjct: 419 FILGVHILALVTFFFWFFYGYQAYFTPETRFLMSPAKIA-EMGVFGFSMLISLTVLVISC 477
Query: 542 PW-LSHAY-SYVXXXXXXXXXXXXXXXN--ILEKFAMVNTVVFDKTGTLTIGRPVVTKVV 597
P + A S + N ++EK V + FDKTGT+T G P VT ++
Sbjct: 478 PCAVGLAMPSAIMAGTGKGAEYGVLFKNAEVIEKMTKVKVIAFDKTGTITKGEPEVTDLI 537
Query: 598 TSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGT 657
P ++E ++L+ A E + HP+ +AI++ N Q T
Sbjct: 538 -------------PFE-INEQQLLELAGVAEKLSEHPLAQAIIKKYREIN-QKEPSEPAT 582
Query: 658 FIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQ--SLVYVGVDNML 715
F PG G +A + G+ +L+ + VDTS E+ + L + +LVY D+ L
Sbjct: 583 FHNIPGKGIMATYSGVNILAGSEKFLQENRVDTSLAGEIAKK-LKGEGKTLVYFAADHRL 641
Query: 716 AGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPN 775
G+I + D +++ +A + L +G ML+GD + +A +A VGI +V++GV P
Sbjct: 642 VGVIALADTVKESSAKAIELLKKKGYIPVMLTGDNEVTARAIAQKVGI--SEVVAGVLPE 699
Query: 776 EKKRFINELQNDENVVAMVGDGINDAAALASSHIXXXXXXXXXXXXXXXXXXLMGNRLSQ 835
K I Q +VAM GDGINDA AL + + ++ L
Sbjct: 700 GKVEAIKAYQEKGYMVAMAGDGINDAPALTQADVGIAMGTGTDIAKEAGEVVIVKGDLVD 759
Query: 836 LLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIG 895
++ A++++R T VKQN +WAF YN +GIP AAGV P T +++P +A LM SS+
Sbjct: 760 IVNAMDIARATFGKVKQNFFWAFVYNTLGIPFAAGVFYPWTKALVSPELAALLMAFSSVS 819
Query: 896 VMANSLLLRLKFSSKQKA 913
V N+LLL+ +F KA
Sbjct: 820 VTLNTLLLK-RFKPSGKA 836
|
|
| TAIR|locus:2031361 HMA5 "heavy metal atpase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 808 (289.5 bits), Expect = 1.9e-87, Sum P(2) = 1.9e-87
Identities = 227/644 (35%), Positives = 332/644 (51%)
Query: 278 GFQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSL----AALVPKLGWKAFFEEPIMLI 333
G++ K+L +G+ NM+ L+ LG +++ S AA P FFE MLI
Sbjct: 354 GWRFYTGSYKALRRGSANMDVLIALGTNAAYFYSLYTVLRAATSPDFKGVDFFETSAMLI 413
Query: 334 AFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSII---EVPCNSLHVGDH 390
+F++LGK LE AK K + + L+ + P A +L+ D + ++ E+ + D
Sbjct: 414 SFIILGKYLEVMAKGKTSQAIAKLMNLAPDTA-ILLSLDKEGNVTGEEEIDGRLIQKNDV 472
Query: 391 IVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRP 450
I ++PG ++ +DG V G+S V+ES TGE PV K V G++N NG L V+V R
Sbjct: 473 IKIVPGAKVASDGYVIWGQSHVNESMITGEARPVAKRKGDTVIGGTLNENGVLHVKVTRV 532
Query: 451 GGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGA-HVLPT 509
G E+A+ IVRLVE AQ +APVQ+LAD++S F VI LS +T++ W L G H P
Sbjct: 533 GSESALAQIVRLVESAQLAKAPVQKLADRISKFFVPLVIFLSFSTWLAWFLAGKLHWYPE 592
Query: 510 A-IQYG-GPVSLALQLSCSVLRKETSIC-CCLSMCPWLSHAYSYVXXXXXXXXXXXXXXX 566
+ I LALQ SV+ C C L + + V
Sbjct: 593 SWIPSSMDSFELALQFGISVM---VIACPCALGLA---TPTAVMVGTGVGASQGVLIKGG 646
Query: 567 NILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAG 626
LE+ VN +VFDKTGTLT+G+PVV K L +N + E + A
Sbjct: 647 QALERAHKVNCIVFDKTGTLTMGKPVVVKT----KLL-----KNMVL----REFYELVAA 693
Query: 627 VESNTVHPIGKAIVE-AAEFSNCQ-NVKVADGT-FIEEPGSGTVAIIEDRKVSVGTIDWL 683
E N+ HP+ KAIVE A +F + + N + F+ G G A ++ R++ VG + +
Sbjct: 694 TEVNSEHPLAKAIVEYAKKFRDDEENPAWPEACDFVSITGKGVKATVKGREIMVGNKNLM 753
Query: 684 RSHGV---DTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQG 740
H V D + + ED M Q+ + V +++ L G++ V D ++ A ++ L S
Sbjct: 754 NDHKVIIPDDAEELLADSED-MAQTGILVSINSELIGVLSVSDPLKPSAREAISILKSMN 812
Query: 741 IGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGIND 800
I M++GD +A +A VGI D V++ KP +K + ELQ +VVAMVGDGIND
Sbjct: 813 IKSIMVTGDNWGTANSIAREVGI--DSVIAEAKPEQKAEKVKELQAAGHVVAMVGDGIND 870
Query: 801 AAALASSHIXXXXXXXXXXXXXXXXXXLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGY 860
+ AL ++ + LM + L ++ A++LSR T ++ N WA GY
Sbjct: 871 SPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYVWALGY 930
Query: 861 NIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLR 904
N++GIPIAAGVL P T L P IAGA M SS+ V+ SLLL+
Sbjct: 931 NLMGIPIAAGVLFPGTRFRLPPWIAGAAMAASSVSVVCCSLLLK 974
|
|
| UNIPROTKB|P77894 ctpV "Probable copper-exporting P-type ATPase V" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 490 (177.5 bits), Expect = 2.9e-87, Sum P(2) = 2.9e-87
Identities = 133/340 (39%), Positives = 180/340 (52%)
Query: 568 ILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGV 627
+LE ++TVVFDKTGTLT R VT V+ +G P+ ++L+ AA V
Sbjct: 447 VLEASKKIDTVVFDKTGTLTRARMRVTDVI-AGQRRQPD------------QVLRLAAAV 493
Query: 628 ESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWL-RSH 686
ES + HPIG AIV AA + A+ F G G A + V VG + H
Sbjct: 494 ESGSEHPIGAAIVAAAHERGLA-IPAANA-FTAVAGHGVRAQVNGGPVVVGRRKLVDEQH 551
Query: 687 GV--DTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVY 744
V D VE E+ ++ V+VG D + G++ V D ++DDAA VV L + G+ V
Sbjct: 552 LVLPDHLAAAAVEQEE-RGRTAVFVGQDGQVVGVLAVADTVKDDAADVVGRLHAMGLQVA 610
Query: 745 MLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAAL 804
M++GD +A +A VGI +KVL+ V P +K + LQ+ VVAMVGDG+NDA AL
Sbjct: 611 MITGDNARTAAAIAKQVGI--EKVLAEVLPQDKVAEVRRLQDQGRVVAMVGDGVNDAPAL 668
Query: 805 ASSHIXXXXXXXXXXXXXXXXXXLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVG 864
+ + LM RL ++ A+ELSR T++T+ QNL WAFGYN
Sbjct: 669 VQADLGIAIGTGTDVAIEASDITLMSGRLDGVVRAIELSRQTLRTIYQNLGWAFGYNTAA 728
Query: 865 IPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLR 904
IP+AA G L P +AGA MG SS+ V+ NSL LR
Sbjct: 729 IPLAA------LGA-LNPVVAGAAMGFSSVSVVTNSLRLR 761
|
|
| UNIPROTKB|P73241 pacS "Cation-transporting ATPase PacS" [Synechocystis sp. PCC 6803 substr. Kazusa (taxid:1111708)] | Back alignment and assigned GO terms |
|---|
Score = 502 (181.8 bits), Expect = 7.9e-87, Sum P(2) = 7.9e-87
Identities = 117/344 (34%), Positives = 189/344 (54%)
Query: 569 LEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVE 628
LE + +V DKTGTLT G+P VT T P S + + +++++AA VE
Sbjct: 416 LEMAEKLTAIVLDKTGTLTQGKPSVTNFFT----LSPTSTEESL------QLIQWAASVE 465
Query: 629 SNTVHPIGKAIVEAAEFSNCQNVKVAD-GTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHG 687
+ HP+ +A+V + Q V + + F G G + + + +GT +WL G
Sbjct: 466 QYSEHPLAEAVVN---YGQSQQVSLLEIDNFQAIAGCGVAGQWQGQWIRLGTSNWLTDLG 522
Query: 688 VDTSTFQ----EVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGV 743
V + Q + + + ++++++ VD + L+ + D I+ + VV +L G+ V
Sbjct: 523 VTGTEHQPWQSQAQQWEKEQKTVIWLAVDTEVKALLAIADAIKPSSPQVVQALKKLGLSV 582
Query: 744 YMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAA 803
YML+GD + +A+ +A VGI VL+ V+P +K + + +LQ N+VAMVGDGINDA A
Sbjct: 583 YMLTGDNQATAQAIADTVGIRH--VLAQVRPGDKAQQVEQLQQKGNIVAMVGDGINDAPA 640
Query: 804 LASSHIXXXXXXXXXXXXXXXXXXLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIV 863
LA + + L+ L +L A++LSR TM ++QNL++AF YN++
Sbjct: 641 LAQADVGIAIGTGTDVAIAASDITLIAGDLQGILTAIKLSRATMGNIRQNLFFAFIYNVI 700
Query: 864 GIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKF 907
GIP+AAG+ P+ G +L P +AGA M SS+ V+ N+L L+ KF
Sbjct: 701 GIPVAAGLFYPLFGLLLNPILAGAAMAFSSVSVVTNALRLK-KF 743
|
|
| TIGR_CMR|SPO_0794 SPO_0794 "copper-translocating P-type ATPase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 490 (177.5 bits), Expect = 2.3e-86, Sum P(3) = 2.3e-86
Identities = 150/480 (31%), Positives = 230/480 (47%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALA 189
L V G++C C V+R L + P V A VNL T TA V V+ P ALA
Sbjct: 73 LTVEGLSCASCVGRVERALNAAPGVVEAQVNLATRTARVSYVT-GSTDP-------AALA 124
Query: 190 KHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHI 249
T+ G+ + D + + KR L LA+ AL V L+ H+
Sbjct: 125 AVSTAAGYAARPEGGAEDGGEEPSDEAAILKRQTL------LAILLAL-PVFLIEMGGHM 177
Query: 250 LGAKASWIH--VFHSTGFHLSLSLFTLL--GPGFQLILDGVKSLFKGAPNMNTLVGLGAV 305
+ A WI + T + + +L T+L GPG G +L +GAP+MN LV LG
Sbjct: 178 IPALHHWIMATIGQQTSYLIQFALTTVLLFGPGRVFYAKGFPALLRGAPDMNALVALGTG 237
Query: 306 SSFTVSSLAALVPKL---GW-KAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGIL 361
+++ S +A P L G ++E +++A +LLG+ LE RA+ + + + L+G+
Sbjct: 238 AAYGFSLVATFAPGLLPAGTANVYYEAAAVIVALILLGRWLEARARGRTGAAIEALVGLQ 297
Query: 362 PSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEP 421
P AR+ + +EV + GD +++ PGDRIPAD V G+S VDES TGEP
Sbjct: 298 PRHARI----ERNGQPVEVEIADIQPGDTLLIRPGDRIPADARVLDGQSHVDESMITGEP 353
Query: 422 LPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVS 481
+PVTK + G++N G L + G +T + I+R+VE+AQ + P+Q + D+++
Sbjct: 354 VPVTKSAGDTLVGGTVNGAGALRARAEKVGADTVLAQIIRMVEQAQGAKLPIQSVVDRIT 413
Query: 482 GHFTYGVIALSAATFVFWNLFG-AHVLPTAIQYGGPVSLALQLSCSV-LRKETSICCCLS 539
F V+ ++A T + W FG + L A+ G V L + C++ L TSI
Sbjct: 414 LWFVPIVMGVAALTVLVWLAFGPSPALGHALVAGVAV-LIIACPCAMGLATPTSIM---- 468
Query: 540 MCPWLSHAYSYVXXXXXXXXXXXXXXXNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTS 599
V + L++ + FDKTGTLT+GRP +T + T+
Sbjct: 469 -----------VGTGRAAELGVLFRKGDALQRLQEARVIAFDKTGTLTLGRPELTDLTTA 517
|
|
| DICTYBASE|DDB_G0284141 atp7a "copper-transporting ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 563 (203.2 bits), Expect = 3.2e-84, Sum P(3) = 3.2e-84
Identities = 175/610 (28%), Positives = 285/610 (46%)
Query: 118 EELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETA-IVWPVSKAKV 176
+ L ++ I+L++GGMTC C ++ + + V VNL ETA +V+ V
Sbjct: 93 KHLVQAENNTIVLNIGGMTCSSCVGIIENYVSNVDGVIECRVNLAMETARVVYDPDLTGV 152
Query: 177 IPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWA 236
+ +++ GF + + D +TK +K K + ++
Sbjct: 153 ---------RDIIRNIEDVGFTAQIPSQNFD------DTKNIQKEEAEKLKKNLIFSTFF 197
Query: 237 LCAVCLVGHLSHILGAKASWIH---VFHSTGFHLSLSLFTLLGP-----GFQLILDGVKS 288
V L+G + H + ++++ + H + S+ L L P G + ++G KS
Sbjct: 198 TVPVFLIGMVLHKISF-FNFLYTNNILHGISYADSIML-CLTTPVQFLVGKRFYVNGYKS 255
Query: 289 LFKGAPNMNTLVGLGAVSSFTVSSLAALVP--------KLGWKAFFEEPIMLIAFVLLGK 340
L G NM+ LV LG ++ S + L+ +G K FF+ LI F+LLGK
Sbjct: 256 LKHGGANMDVLVALGTSCAYFYSLMVLLMDYTSEDGGSTVGMKTFFDTSASLITFILLGK 315
Query: 341 NLEQRAKIKATSDMTGLLGILPSKARLLV-------------DNDAKDSIIE---VPCNS 384
LE AK K + + L+G+ +KA LL DN +I+E + +
Sbjct: 316 YLEVIAKGKTSEAIKKLMGLQATKALLLTIDQNEGGGGGGGSDNKTTTTILEEREIDIDL 375
Query: 385 LHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLT 444
+ GD++ VLPG ++P DG+V +G S +DES TGE LPV+K ++ G++N G L
Sbjct: 376 VQRGDYLKVLPGSKVPTDGIVVSGLSHIDESIITGESLPVSKKSGDKLIGGTLNQKGVLV 435
Query: 445 VEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGA 504
++ R GGET++ I++LVE+AQ+ AP+Q LAD+VSG+F VI L TF+ W + G+
Sbjct: 436 MKATRIGGETSLSQIIKLVEKAQTERAPIQSLADKVSGYFVPSVITLGLLTFIVWLIAGS 495
Query: 505 HVLPTAIQY-GGPVSLALQLSCSVLRKETSICCCLSMCPW-LSHAYSY-VXXXXXXXXXX 561
+ A Y S Q + LR S+ C L+ + V
Sbjct: 496 SGV--ASDYIKASNSSVFQFA---LRNAISVIVIACPCALGLATPTAVMVGTGIGAQNGI 550
Query: 562 XXXXXNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEIL 621
+ LE ++ ++FDKTGTLT G+P+V+ V G+L + N+ N +++
Sbjct: 551 LIKGGSHLETAHKISAIIFDKTGTLTTGKPIVSNVNIFGNLNNNNNGNNNSGKINKKTFF 610
Query: 622 KFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEE-PGSGTVAIIEDRKVSV--G 678
+ A E+ + HP+ AIV A F C E GSG A + + + G
Sbjct: 611 QMVASAEAASEHPLAGAIVNYA-FEVCDVQSTTPPLSFESITGSGIRATLAPNNIEIMIG 669
Query: 679 TIDWLRSHGV 688
+ W++S G+
Sbjct: 670 NLKWIKSEGI 679
|
|
| TIGR_CMR|CBU_1507 CBU_1507 "copper-translocating P-type ATPase" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 481 (174.4 bits), Expect = 7.2e-83, Sum P(3) = 7.2e-83
Identities = 117/347 (33%), Positives = 191/347 (55%)
Query: 569 LEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVE 628
L+ + + ++ DKTGT+T G+P+++ T+ E ++L AA VE
Sbjct: 415 LQMASQLTAIILDKTGTVTEGKPMLSDFYTADGF-------------DEKKLLSIAASVE 461
Query: 629 SNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEE-PGSGTVAIIEDRKVSVGTIDWLRSHG 687
+ HP+ AI+E A+ N+ +A T E G G A IE++ + +G + +++
Sbjct: 462 KGSEHPLANAIIEGAKK---YNIPLAKATQFESIAGHGVKAKIENQSILLGNLHLMKNEK 518
Query: 688 VDT--STFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYM 745
V+ + M D Q+ +Y+ +D +AG++ + D I+ D+ + L G+ V M
Sbjct: 519 VELGGAPAHAERMAD-QGQTPIYIALDGKIAGIVSIVDPIKPDSQKAIADLQRAGLKVVM 577
Query: 746 LSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALA 805
++GD +A VA VGI ++V++ V P +K + + LQ VAMVGDGINDA ALA
Sbjct: 578 VTGDNPLTANAVAKQVGI--EQVIAEVLPEDKAKKVKLLQQQGERVAMVGDGINDAPALA 635
Query: 806 SSHIXXXXXXXXXXXXXXXXXXLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGI 865
++ + L+ L+ ++ A+ +SR T++ +KQNL+ AF YN +GI
Sbjct: 636 AADVGFAIGTGTDVAIESADIALISGSLTGVVNAISISRATLRNIKQNLFGAFIYNTLGI 695
Query: 866 PIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQK 912
PIAAGV P+TG +L+P IAGA M LSS+ V+AN+ RL+F ++K
Sbjct: 696 PIAAGVFYPLTGLLLSPIIAGAAMALSSVTVVANAN--RLRFFRRRK 740
|
|
| POMBASE|SPBC29A3.01 ccc2 "copper transporting ATPase Ccc2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 754 (270.5 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 228/723 (31%), Positives = 357/723 (49%)
Query: 231 LAVSWALCAVCLVGHLSHILGAKASWI--HVFHSTGFH---LSLSLFTLLGPGFQLILDG 285
+++S++L + L +A+++ H F H L LSL G G
Sbjct: 175 ISISFSLAVMFLPQIFDSCDSMRAAFLVPHYFGICAGHIISLVLSLPVQFGVGRVYYSAA 234
Query: 286 VKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWK-----AFFEEPIMLIAFVLLGK 340
+L +G NM+ LV LG+ +F S ++ FF+ ML+ FV LG+
Sbjct: 235 YHALKRGTANMDVLVSLGSTVAFAASIFFMILYSARHADNPAPIFFDTADMLLTFVTLGR 294
Query: 341 NLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIP 400
LE +AK ++ ++ LL + PS A ++ DN+ IE+ + + GD I+V PG+ IP
Sbjct: 295 YLESKAKGSTSAALSQLLSLAPSSATIIEDNEQ----IEILADLIERGDLILVKPGEIIP 350
Query: 401 ADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIV 460
DG V G S VDESS +GEP+PV K + E+ +G+ N NG L V+ + E+ + IV
Sbjct: 351 VDGTVVEGSSYVDESSVSGEPVPVHKTIDDELLSGTANGNGRLLVKATKSPRESQLAVIV 410
Query: 461 RLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPV--- 517
LV+ AQ AP+Q+ AD+V+G F ++ALS +TF FW LF + + P+
Sbjct: 411 DLVQRAQISHAPIQQFADRVAGIFVPVIVALSISTFTFWFLFTKYSSKYPSVFDDPMGKF 470
Query: 518 SLALQLSCSVLRKETSIC-CCLSMCPWLSHAYSYVXXXXXXXXXXXXXXXNILEKFAMVN 576
++ L+L+ SV+ C C L + + V ILE+ V+
Sbjct: 471 AVCLKLTISVV---VVACPCALGLS---TPTAVMVGTGVGALNGIIIKGGEILERLNQVD 524
Query: 577 TVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIG 636
TVVFDKTGTLT+G+ VT + S+ D N ++ + + + F ES++ HPIG
Sbjct: 525 TVVFDKTGTLTVGKLSVTDI----SIVD-NLEE--LLDIPKNIFWAFVKASESSSEHPIG 577
Query: 637 KAIVE-AAEFSNCQNVKVADGTFIEEPGSGTVAII--EDRKVS--VGTIDWLRSHGVDT- 690
KAI E A+EF++ + + +F PG G ++ ++R +G L + V
Sbjct: 578 KAITEKASEFTDVSEIGIE--SFNAVPGEGVDVVLRWKERTFHALLGNSLLLEHNNVSIP 635
Query: 691 STFQ-EVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGD 749
F ++++ + V + +D G + D++R D+ V++L G V +L+GD
Sbjct: 636 DDFDSKLKLSSSSGLTCVRIAIDGQFVGFLGCMDQVRPDSYQTVSALKQLGKKVCLLTGD 695
Query: 750 KKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHI 809
+K +A VA + I V + P++K I +L++ ++ VAMVGDGIND+ +L + +
Sbjct: 696 QKATARRVAQGLEIDFSDVYAEAVPSQKAEIIQKLKDQKHCVAMVGDGINDSPSLVLADV 755
Query: 810 XXXXXXXXXXXXXXXXXXLMGNR-LSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIA 868
L+ L V+ +LSR+ +K +K NL WA YN V IPIA
Sbjct: 756 GIAPINGSGIALESADVILVRKGVLLDTAVSFDLSRVIVKRIKMNLVWACIYNFVMIPIA 815
Query: 869 AGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDS 928
G LP G L P A A M SS+ V+A+SLLLR K +A S+ +S
Sbjct: 816 MGFFLP-WGIYLNPMWASAAMMFSSLSVLASSLLLRRWKKPKSLIFSEADDVETESSTNS 874
Query: 929 HQL 931
L
Sbjct: 875 SVL 877
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SZC9 | HMA6_ARATH | 3, ., 6, ., 3, ., n, 1 | 0.6513 | 0.9615 | 0.9494 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.III.2222.1 | heavy metal ATPase (865 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 937 | |||
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-172 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-162 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-116 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 4e-98 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 8e-82 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 6e-81 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 4e-48 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 3e-41 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 2e-37 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 3e-36 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 3e-31 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 9e-28 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 5e-22 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 3e-19 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 8e-17 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-16 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 5e-14 | |
| cd00371 | 63 | cd00371, HMA, Heavy-metal-associated domain (HMA) | 2e-12 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 2e-11 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 2e-10 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 3e-10 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 4e-10 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 5e-10 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 6e-09 | |
| pfam00403 | 62 | pfam00403, HMA, Heavy-metal-associated domain | 1e-08 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 3e-07 | |
| COG2608 | 71 | COG2608, CopZ, Copper chaperone [Inorganic ion tra | 3e-06 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 6e-06 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-05 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-05 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-05 | |
| PLN03138 | 796 | PLN03138, PLN03138, Protein TOC75; Provisional | 3e-05 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 6e-05 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 2e-04 | |
| PRK06958 | 182 | PRK06958, PRK06958, single-stranded DNA-binding pr | 2e-04 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 4e-04 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 5e-04 | |
| PTZ00146 | 293 | PTZ00146, PTZ00146, fibrillarin; Provisional | 6e-04 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 0.001 | |
| PRK06958 | 182 | PRK06958, PRK06958, single-stranded DNA-binding pr | 0.001 | |
| PTZ00146 | 293 | PTZ00146, PTZ00146, fibrillarin; Provisional | 0.001 | |
| PTZ00146 | 293 | PTZ00146, PTZ00146, fibrillarin; Provisional | 0.001 | |
| PRK13748 | 561 | PRK13748, PRK13748, putative mercuric reductase; P | 0.002 | |
| pfam07172 | 91 | pfam07172, GRP, Glycine rich protein family | 0.002 | |
| PTZ00146 | 293 | PTZ00146, PTZ00146, fibrillarin; Provisional | 0.004 | |
| COG2179 | 175 | COG2179, COG2179, Predicted hydrolase of the HAD s | 0.004 | |
| PHA00370 | 297 | PHA00370, III, attachment protein | 0.004 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 635 bits (1639), Expect = 0.0
Identities = 297/785 (37%), Positives = 413/785 (52%), Gaps = 86/785 (10%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETA-IVWPVSKAKVIPNWQRQLGEAL 188
L V GMTC CA+ ++ L P V A VNL TE A +V+ + L +
Sbjct: 6 LSVEGMTCAACASRIEA-LNKLPGVEEARVNLATERATVVYDPEEV--------DLPADI 56
Query: 189 AKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSH 248
+ G+ + L D + L+E R L ++ L L+ L
Sbjct: 57 VAAVEKAGYSARLTAALAD--------PAEAEARLLRELLRRLIIAGLLTLPLLLLSLGL 108
Query: 249 ILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAVSSF 308
+LGA L+ L G+ ++L +G NM+TLV L + ++
Sbjct: 109 LLGAFLLPW-------VSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAY 161
Query: 309 TVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLL 368
S A L P +FEE MLI LLG+ LE RAK +A + LL + P A ++
Sbjct: 162 AYSLYATLFP-----VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVV 216
Query: 369 VDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIP 428
+ EVP + VGD ++V PG+RIP DGVV +G S+VDES TGE LPV K P
Sbjct: 217 RGDG---EEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSSVDESMLTGESLPVEKKP 273
Query: 429 ESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGV 488
EV AG++NL+G+LT+ V R G +T + I+RLVEEAQS +AP+QRLAD+V+ +F V
Sbjct: 274 GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVV 333
Query: 489 IALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSI--CCC---LSMCPW 543
+ ++A TF W LFG GG AL + +VL + C C L+
Sbjct: 334 LVIAALTFALWPLFG----------GGDWETALYRALAVL-----VIACPCALGLATPT- 377
Query: 544 LSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLT 603
A VG A RG+L++GG LE+ A V+TVVFDKTGTLT G+P VT VV
Sbjct: 378 ---AIL-VGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-- 431
Query: 604 DPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPG 663
E E+L AA +E ++ HP+ KAIV+AA +V+ F E PG
Sbjct: 432 ------------DEDELLALAAALEQHSEHPLAKAIVKAAAERGLPDVE----DFEEIPG 475
Query: 664 SGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQE-VEMEDLMNQSLVYVGVDNMLAGLIYVE 722
G A ++ +V VG L G+D E +E + +++V+V VD L G+I +
Sbjct: 476 RGVEAEVDGERVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALA 535
Query: 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFIN 782
D +R DA + +L + GI V ML+GD + +AE +A +GI D+V + + P +K +
Sbjct: 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI--DEVRAELLPEDKAEIVR 593
Query: 783 ELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 842
ELQ + VAMVGDGINDA ALA++ +G+AMG G A E A VVLM + LS + A++L
Sbjct: 594 ELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDL 653
Query: 843 SRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLL 902
SR T + +KQNL+WAFGYN + IP+AAG L LTP IA M SS+ V+ N+L
Sbjct: 654 SRATRRIIKQNLFWAFGYNAIAIPLAAGGL-------LTPWIAALAMSGSSVLVVLNALR 706
Query: 903 LRLKF 907
L F
Sbjct: 707 LLRSF 711
|
Length = 713 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 511 bits (1318), Expect = e-172
Identities = 238/604 (39%), Positives = 336/604 (55%), Gaps = 47/604 (7%)
Query: 287 KSLFKGAPNMNTLVGLGAVSSFTVSSLAALV-----PKLGWKAFFEEPIMLIAFVLLGKN 341
K+L PNM+TL+ LG ++ SL AL+ L FF+ MLI F+LLG+
Sbjct: 11 KALRHKTPNMDTLIALGTTVAY-GYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRW 69
Query: 342 LEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPA 401
LE AK +A+ ++ L + PS A LL D+ I EVP L GD + VLPG++IP
Sbjct: 70 LEMLAKGRASDALSKLAKLQPSTATLLTDDG---EIEEVPVELLQPGDIVRVLPGEKIPV 126
Query: 402 DGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVR 461
DG V G S VDES TGE LPV K V AG++N G+L V G +T + IVR
Sbjct: 127 DGTVIEGESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVR 186
Query: 462 LVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLAL 521
LV +AQ +AP+QRLAD+V+G+F VIA++ TFV W + GA A++ V L
Sbjct: 187 LVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLILGADF-VFALEVAVTV---L 242
Query: 522 QLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFD 581
++C C L + A V T L A G+L++ G+ LE+ A ++TVVFD
Sbjct: 243 IIACP---------CALGLATPTVIA---VATGLAAKNGVLIKDGDALERAANIDTVVFD 290
Query: 582 KTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVE 641
KTGTLT G+P VT V E+L AA +E+ + HP+ KAIV
Sbjct: 291 KTGTLTQGKPTVTDVH-------------VFGESDRDELLALAAALEAGSEHPLAKAIVS 337
Query: 642 AAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDL 701
A+ +V+D F PG G +E + +G L +G+ T E
Sbjct: 338 YAKAKGITLSQVSD--FKAIPGIGVEGTVEGHTIQLGNEKLLGENGLKTDGEVEEG---- 391
Query: 702 MNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV 761
+ V V V+ LAG++ + D+++ +A V+ +L +GI ML+GD + +A+ VA +
Sbjct: 392 GGTTSVLVAVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL 451
Query: 762 GIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAAS 821
GI + V + V P++K I +LQ VVAMVGDGINDA ALA + +G+A+G G A
Sbjct: 452 GI--ENVRAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIGAGTDVAI 509
Query: 822 EVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLT 881
E A VVL+ N L+ + A++LSR T++ +KQNL WAFGYN++ IPIAAGVL P +L+
Sbjct: 510 EAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYPAGI-LLS 568
Query: 882 PSIA 885
P++A
Sbjct: 569 PAVA 572
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 487 bits (1255), Expect = e-162
Identities = 236/614 (38%), Positives = 347/614 (56%), Gaps = 64/614 (10%)
Query: 296 MNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMT 355
M+ L+ L ++++ + E +L+ LLG+ LE+RAK +A+ ++
Sbjct: 1 MDLLMALATIAAYAMG-------------LVLEGALLLFLFLLGETLEERAKGRASDALS 47
Query: 356 GLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDES 415
LL + PS AR+L + S EVP L VGD ++V PG+RIP DGVV +G S VDES
Sbjct: 48 ALLALAPSTARVLQGDG---SEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESEVDES 104
Query: 416 SFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQR 475
+ TGE +PV K EV AG+IN +G+LT+ V + G ++ + IV LVEEAQS +AP+QR
Sbjct: 105 ALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQR 164
Query: 476 LADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSIC 535
LAD+++ ++ V+A++ TFV W GA AL + +VL C
Sbjct: 165 LADRIASYYVPAVLAIALLTFVVWLALGAL-------------GALYRALAVL---VVAC 208
Query: 536 CC---LSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPV 592
C L+ A V + A RG+L++GG+ LEK A V TVVFDKTGTLT G+P
Sbjct: 209 PCALGLATPV----AIL-VAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPT 263
Query: 593 VTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVK 652
V + L D +SE E+L AA +E ++ HP+ +AIV A+ + K
Sbjct: 264 VVDIEP---LDD--------ASISEEELLALAAALEQSSSHPLARAIVRYAKKRGLELPK 312
Query: 653 VADGTFIEEPGSGTVAIIE-DRKVSVGTIDWLRSHGVDTSTFQEVEMED-LMNQSLVYVG 710
D E PG G A ++ +V +G +L S ++ E +++V+V
Sbjct: 313 QED--VEEVPGKGVEATVDGGEEVRIGNPRFLELAIEPISASPDLLNEGESQGKTVVFVA 370
Query: 711 VDNMLAGLIYVEDRIRDDAAHVVNSL-SSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVL 769
VD L G+I + D++R +A + +L + GI + ML+GD +++AE VA+ +GI D+V
Sbjct: 371 VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGI--DEVH 428
Query: 770 SGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLM 829
+ + P +K + ELQ + VVAMVGDGINDA ALA++ +G+AMG G A E A +VL+
Sbjct: 429 AELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLL 488
Query: 830 GNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALM 889
+ LS L A++LSR T + +KQNL WA GYN+V IP+AAG LLP+ +A L
Sbjct: 489 NDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPL------WLLAVLLH 542
Query: 890 GLSSIGVMANSLLL 903
S++ V+ NSL L
Sbjct: 543 EGSTVLVVLNSLRL 556
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 366 bits (942), Expect = e-116
Identities = 202/580 (34%), Positives = 295/580 (50%), Gaps = 65/580 (11%)
Query: 328 EPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHV 387
E +L+ +G+ LE+ A +A + L+ + P AR+L S+ EV L V
Sbjct: 20 EGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRG----GSLEEVAVEELKV 75
Query: 388 GDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEV 447
GD +VV PG+R+P DGVV +G STVDES+ TGE +PV K P EV AG+INL+G LT+ V
Sbjct: 76 GDVVVVKPGERVPVDGVVLSGTSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVV 135
Query: 448 RRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVL 507
+ ++ + IV LVEEAQSR+A QR D+ + ++T V+A++ A ++ L
Sbjct: 136 TKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKRWPF 195
Query: 508 PTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGN 567
Y V L + C+++ +S AY S A G+L++GG
Sbjct: 196 WV---YRALVLLVVASPCALV---------ISAPA----AYLS-AISAAARHGILIKGGA 238
Query: 568 ILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGV 627
LE A + TV FDKTGTLT GRP V VV E+L+ AA
Sbjct: 239 ALEALAKIKTVAFDKTGTLTTGRPKVVDVVP-------------------AEVLRLAAAA 279
Query: 628 ESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHG 687
E + HP+ +AIV+ A + + E PG G A+++ +V +G L +
Sbjct: 280 EQASSHPLARAIVDYAR------KRENVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAAV 333
Query: 688 VDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIG-VYML 746
+++V+V D G I + D R DAA + L + GI V ML
Sbjct: 334 GARPESA--------GKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVML 385
Query: 747 SGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALAS 806
+GD++ AE VA +GI D+V + + P +K + EL+ VAMVGDGINDA ALA+
Sbjct: 386 TGDRRAVAERVARELGI--DEVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAA 443
Query: 807 SHIGVAMGG-GVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGI 865
+ +G+AMG G A E A VVL+ + LS+L A+ L+R T + VKQN+ I
Sbjct: 444 ADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNV--VIALGI--- 498
Query: 866 PIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRL 905
I +LL + G +L +A S++ V+ N+L L
Sbjct: 499 -ILLLILLALFG-VLPLWLAVLGHEGSTVLVILNALRLLR 536
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 326 bits (838), Expect = 4e-98
Identities = 211/639 (33%), Positives = 318/639 (49%), Gaps = 69/639 (10%)
Query: 287 KSLFKGAPNMNTLVGLGA----VSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNL 342
KSL G+ M+TLV LG + S +V+ P ++E M+I + LG L
Sbjct: 243 KSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHML 302
Query: 343 EQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPAD 402
E RA+ +++ + LL + P AR++ D K VP + G + + GDR+P D
Sbjct: 303 EARARQRSSKALEKLLDLTPPTARVVTDEGEK----SVPLADVQPGMLLRLTTGDRVPVD 358
Query: 403 GVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRL 462
G + G + +DE+ TGEP+P K V AG++ +G++ G T + I+R+
Sbjct: 359 GEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRM 418
Query: 463 VEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAH--------VLPTAIQYG 514
V +AQS + + +LAD++S F V+ ++ + W FG + T +
Sbjct: 419 VRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIA 478
Query: 515 GPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAM 574
P +L L S++ S VG + A G+L+R + L++ +
Sbjct: 479 CPCALGLATPMSII--------------------SGVGRA--AEFGVLVRDADALQRAST 516
Query: 575 VNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHP 634
++T+VFDKTGTLT G+P V V T + E + L+ AA +E + HP
Sbjct: 517 LDTLVFDKTGTLTEGKPQVVAVKTFNGVD-------------EAQALRLAAALEQGSSHP 563
Query: 635 IGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQ 694
+ +AI++ A V F G G E + +G L VDT
Sbjct: 564 LARAILDKAGDMTLPQVN----GFRTLRGLGVSGEAEGHALLLGNQALLNEQQVDTK--- 616
Query: 695 EVEMEDLMNQ------SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG 748
+E + + V + VD A L+ + D +R D+ + L G + ML+G
Sbjct: 617 --ALEAEITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTG 674
Query: 749 DKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSH 808
D +A +A GI D+V++GV P+ K I LQ+ VAMVGDGINDA ALA +
Sbjct: 675 DNPTTANAIAKEAGI--DEVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQAD 732
Query: 809 IGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIA 868
+G+AMGGG A E A++ LM + L + AL +SR T++ +KQNL AF YN +GIPIA
Sbjct: 733 VGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIA 792
Query: 869 AGVLLPVTGTMLTPSIAGALMGLSSIGVMANS-LLLRLK 906
AG+L P TGT+L P +AGA M LSSI V++N+ LLR K
Sbjct: 793 AGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLRFK 831
|
Length = 834 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 274 bits (702), Expect = 8e-82
Identities = 144/593 (24%), Positives = 248/593 (41%), Gaps = 89/593 (15%)
Query: 331 MLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDH 390
++ VL+ L + K+KA + L L + V + E+P L GD
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRN---GWKEIPAKDLVPGDV 57
Query: 391 IVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESE----------VAAGSINLN 440
++V G+ +PADGV+ +G VDES+ TGE PV K E V AG+
Sbjct: 58 VLVKSGETVPADGVLLSGSCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFG 117
Query: 441 GTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGH-FTYGVIALSAATFVFW 499
GTL V V G T +G I +V+ P+Q D++ F ++ L+ A F++
Sbjct: 118 GTLIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYL 177
Query: 500 NLFGAHVLP---------TAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSY 550
+ G + P +L ++ ++
Sbjct: 178 FIRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALA---------------------- 215
Query: 551 VGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQN 610
VG + A +G+L+R N LE+ V+ + DKTGTLT + + V G K++
Sbjct: 216 VGDARLAKKGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGG------KED 269
Query: 611 PIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFI-------EEPG 663
L A + P+ KA++++AE + + +
Sbjct: 270 NSSSLV-------ACDNNYLSGDPMEKALLKSAELVGKADKGNKEYKILDVFPFSSVLKR 322
Query: 664 SGTVAIIEDRK---VSVGTIDWLRSHGVDTSTFQEVEMEDLMNQS---LVYVGVDNM--- 714
+ D G +++ + E + + ++ +
Sbjct: 323 MSVIVETPDGSDLLFVKGAPEFILERCNNYE-----EKYLELARQGLRVLAFASKELEDD 377
Query: 715 --LAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV 772
GLI ED +R DA + L + GI V M++GD +A+ +A +GI V + V
Sbjct: 378 LEFLGLITFEDPLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGI---DVFARV 434
Query: 773 KPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR 832
P +K + + LQ ++VAM GDG+NDA AL + +G+AMG A A +VL+ +
Sbjct: 435 SPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDD 489
Query: 833 LSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIA 885
LS ++ A++ R +K N++WA YN++ IP+A +++ + + ++A
Sbjct: 490 LSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVIILLLPMLAALA 542
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 277 bits (710), Expect = 6e-81
Identities = 225/795 (28%), Positives = 353/795 (44%), Gaps = 133/795 (16%)
Query: 132 VGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKH 191
V GM C CA V+ + V+ V TE K++ + + +
Sbjct: 59 VSGMDCPSCARKVENAVRQLAGVNQVQVLFATE----------KLVVDADNDIRAQVESA 108
Query: 192 LTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHILG 251
+ GF SLRD + E+ + ++ + + +H G
Sbjct: 109 VQKAGF--SLRDEQA--------AAAAPESRLKSENLPLITLAVMMAISWGLEQFNHPFG 158
Query: 252 AKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVS 311
A F +T + L+ + +LI G S F + TL+ +V+
Sbjct: 159 QLA-----FIATTL---VGLYPIARKALRLIRSG--SPFA----IETLM--------SVA 196
Query: 312 SLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDN 371
++ AL +G A E M++ L+G+ LE A +A ++ L+ ++P A L D
Sbjct: 197 AIGALF--IGATA---EAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDG 251
Query: 372 DAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESE 431
+ + EV L GD I V G R+PADG + + ++ DES+ TGE +PV + +
Sbjct: 252 ERE----EVAIADLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGEK 307
Query: 432 VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIAL 491
V AG+ +++ +T+EV G +A+ I+ L+EEA+ R AP++R D+ S +T ++ +
Sbjct: 308 VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLV 367
Query: 492 SAATFVFWNLFGAHVLPTAIQYGGPVSLALQL-SCSVLRKETSICCCLSMCPWLSHAYSY 550
+ + L A I Y G L L L C C L + + A
Sbjct: 368 ALLVILVPPLLFAAPWQEWI-YRG---LTLLLIGCP---------CALVIS---TPAAIT 411
Query: 551 VGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQN 610
G + A RG L++GG LE+ V TV FDKTGTLT G+P VT +
Sbjct: 412 SGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIH------------- 458
Query: 611 PIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAII 670
P +SE+E+L AA VE + HP+ +AIV A+ + + GSG +
Sbjct: 459 PATGISESELLALAAAVEQGSTHPLAQAIVREAQVRGLAIPEAESQRAL--AGSGIEGQV 516
Query: 671 EDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAA 730
+V + + + + ++ + +++V V ++ + GLI ++D +R DA
Sbjct: 517 NGERVLICAPG--KLPPLADAFAGQINELESAGKTVVLVLRNDDVLGLIALQDTLRADAR 574
Query: 731 HVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI-------PKDKVLSGVKPNEKKRFINE 783
++ L + GI ML+GD +A +A +GI P+DKV + + E
Sbjct: 575 QAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAGLLPEDKV----------KAVTE 624
Query: 784 LQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 843
L N +AMVGDGINDA A+ ++ IG+AMG G A E A L NRL L +ELS
Sbjct: 625 L-NQHAPLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELS 683
Query: 844 RLTMKTVKQNLWWAFGYNIVGIPIAAGV--------LLPVTG---TMLTPSIAGALMGLS 892
R T ++QN I IA G+ LL +TG +L S A AL
Sbjct: 684 RATHANIRQN-----------ITIALGLKAIFLVTTLLGITGLWLAVLADSGATAL---- 728
Query: 893 SIGVMANSL-LLRLK 906
V AN+L LLR +
Sbjct: 729 ---VTANALRLLRKR 740
|
Length = 741 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 185 bits (471), Expect = 4e-48
Identities = 155/694 (22%), Positives = 259/694 (37%), Gaps = 145/694 (20%)
Query: 296 MNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPI----MLIAFVLLGKNLEQRAKIKAT 351
L+ + A+ S V W + I +++ LLG E +A
Sbjct: 82 FIILLLVAALLSAFVGD---------WVDAGVDAIVILLVVVINALLGFVQE----YRAE 128
Query: 352 SDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRST 411
+ L + KA++L D +E+P + L GD +++ GD +PAD +
Sbjct: 129 KALEALKKMSSPKAKVLRDGK----FVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184
Query: 412 -VDESSFTGEPLPVTKIPESEVA--------------AGSINLNGTLTVEVRRPGGETAM 456
VDES+ TGE LPV K +G+ ++G V G ET
Sbjct: 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEF 244
Query: 457 GDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGP 516
G I RL+ + + P+QR +++ + L A FV G + L +
Sbjct: 245 GKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTA-- 302
Query: 517 VSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVN 576
++LA+ L +I +G A ++R N +E V+
Sbjct: 303 LALAVAAVPEGLPAVVTIAL-------------ALGAQRMAKDNAIVRSLNAIETLGSVD 349
Query: 577 TVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESN------ 630
+ DKTGTLT + V K+ +G D + K P +L AA + ++
Sbjct: 350 VICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLL--AAALCNSVTPEKN 407
Query: 631 ----TVHPIGKAIVEAAEFSNC--------QNVKVAD-----------GTFIEEPGSGTV 667
P A+VE AE + ++ +
Sbjct: 408 GWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYI 467
Query: 668 AI-------IEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSL-------------- 706
I +R S+G ++ L T +E +++L ++ L
Sbjct: 468 LFVKGAPEVILERCKSIGELEPLTE--EGLRTLEEA-VKELASEGLRVLAVAYKKLDRAE 524
Query: 707 -----VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV 761
+ D + GL +ED R+D + L GI V+M++GD +A +A
Sbjct: 525 KDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC 584
Query: 762 GIPKD----KVLSG-----------------------VKPNEKKRFINELQNDENVVAMV 794
GI + V+ G V P +K R + LQ +VVAM
Sbjct: 585 GIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMT 644
Query: 795 GDGINDAAALASSHIGVAMGG-GVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQN 853
GDG+NDA AL ++ +G+AMGG G AA E A +VL+ + + +++A+ R +K+
Sbjct: 645 GDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKF 704
Query: 854 LWWAFGYNIVGI------PIAAGVLLPVTGTMLT 881
+ + N+ + + LP+T L
Sbjct: 705 ILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLL 738
|
Length = 917 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 150 bits (382), Expect = 3e-41
Identities = 80/246 (32%), Positives = 124/246 (50%), Gaps = 29/246 (11%)
Query: 331 MLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDH 390
+++ VL+ LE + +A + L +LP A ++ + E+P + L VGD
Sbjct: 1 IILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDG---KEEEIPADELVVGDI 57
Query: 391 IVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRP 450
+++ PGDR+PADG + G VDES+ TGE LPV K V AG++ L+G L V V
Sbjct: 58 VLLKPGDRVPADGRIIEGSLEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTAT 117
Query: 451 GGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTA 510
G +T +G I RLVEEA+S + P+QRL D+++ V+AL+ F+ W
Sbjct: 118 GEDTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIW----------- 166
Query: 511 IQYGGPVSLALQLSCSVLRKETSICCCLSMCP-----WLSHAYSYVGTSLGATRGLLLRG 565
GG AL + +VL ++ CP + A + VG A +G+L++
Sbjct: 167 FFRGGDFLEALLRALAVL---------VAACPEALPLAVPLALA-VGAGRLAKKGILVKN 216
Query: 566 GNILEK 571
+ LE
Sbjct: 217 LSALET 222
|
Length = 222 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 150 bits (379), Expect = 2e-37
Identities = 144/503 (28%), Positives = 232/503 (46%), Gaps = 58/503 (11%)
Query: 365 ARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPV 424
A+LL D+ +I +VP + L GD ++V GD IP DG V G ++VDES+ TGE PV
Sbjct: 107 AKLLRDDG---AIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVASVDESAITGESAPV 163
Query: 425 TKIPESEVAA---GSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVS 481
K + A+ G+ L+ L VE GET + ++ LVE AQ R+ P +
Sbjct: 164 IKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALT--- 220
Query: 482 GHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGG-PVSLALQLSCSVLRKETSICCCLSM 540
I L A T VF L L YGG +S+ + ++ V T+I LS
Sbjct: 221 -------ILLIALTLVF--LLVTATLWPFAAYGGNAISVTVLVALLVCLIPTTIGGLLS- 270
Query: 541 CPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSG 600
A G ++ G +E V+T++ DKTGT+T+G + ++ +
Sbjct: 271 ------AIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFI--- 321
Query: 601 SLTDPNSKQNPIHPLSETEILKFA--AGVESNTVHPIGKAIVEAAEFSNCQ--NVKVADG 656
P + E + A A + +T P GK+IV A+ + +V+
Sbjct: 322 ----------PAQGVDEKTLADAAQLASLADDT--PEGKSIVILAKQLGIREDDVQSLHA 369
Query: 657 TFIEEPG----SGTVAIIEDRKVSVGTIDWLRSH-----GVDTSTF-QEVEMEDLMNQSL 706
TF+E SG + R + G +D ++ H G + Q V+ +
Sbjct: 370 TFVEFTAQTRMSGI-NLDNGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTP 428
Query: 707 VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD 766
+ V DN + G+IY++D ++ L GI M++GD + +A +A+ G+ D
Sbjct: 429 LVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV--D 486
Query: 767 KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASV 826
++ P +K I + Q + +VAM GDG NDA ALA + +GVAM G AA E A++
Sbjct: 487 DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANM 546
Query: 827 VLMGNRLSQLLVALELSRLTMKT 849
V + + ++L+ + + + + T
Sbjct: 547 VDLDSDPTKLIEVVHIGKQLLIT 569
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 3e-36
Identities = 138/489 (28%), Positives = 222/489 (45%), Gaps = 68/489 (13%)
Query: 363 SKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPL 422
+ ARLL + SI VP L GD ++V G+ IP+DG V G ++VDES+ TGE
Sbjct: 104 TIARLLRADG---SIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVASVDESAITGESA 160
Query: 423 PVTKIP---ESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQ 479
PV + S V G+ L+ L + + GET + ++ LVE A+ ++ P +
Sbjct: 161 PVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNE----- 215
Query: 480 VSGHFTYGVIA----LSAATFVFWNLFGAHVLPTAIQYGG-PVSLALQLSCSVLRKETSI 534
IA LS T +F L A + P AI GG S+ + ++ V T+I
Sbjct: 216 ---------IALTILLSGLTLIFL-LAVATLYPFAIYSGGGAASVTVLVALLVCLIPTTI 265
Query: 535 CCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVT 594
LS A G ++ G +E V+T++ DKTGT+T+G +
Sbjct: 266 GGLLS-------AIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQAS 318
Query: 595 KVVTSGSLTDPNSKQNPIHPLSETEILKFA--AGVESNTVHPIGKAIVEAAE---FSNCQ 649
+ + P+ +SE E+ A A + T P G++IVE A+ +
Sbjct: 319 EFI-------------PVPGVSEEELADAAQLASLADET--PEGRSIVELAKKLGIELRE 363
Query: 650 NVKVADGTFIEEPG----SGTVAIIEDRKVSVGTID----WLRSHGVDTSTFQEVEMEDL 701
+ + F+ SG V + R++ G +D ++R G + ++++
Sbjct: 364 DDLQSHAEFVPFTAQTRMSG-VDLPGGREIRKGAVDAIRRYVRERGGHIPEDLDAAVDEV 422
Query: 702 MNQS---LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA 758
LV V + + G+IY++D ++ L GI M++GD +A +A
Sbjct: 423 SRLGGTPLV-VVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 481
Query: 759 SLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVG 818
+ G+ D ++ P +K I + Q + +VAM GDG NDA ALA + +GVAM G
Sbjct: 482 AEAGV--DDFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQ 539
Query: 819 AASEVASVV 827
AA E A++V
Sbjct: 540 AAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 3e-31
Identities = 135/491 (27%), Positives = 221/491 (45%), Gaps = 74/491 (15%)
Query: 363 SKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPL 422
+ AR L + + EVP L GD ++V G+ IPADG V G ++VDES+ TGE
Sbjct: 104 TFARKLREPG---AAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVASVDESAITGESA 160
Query: 423 PVTKIP---ESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQ 479
PV + S V G+ L+ + + + GE+ + ++ LVE A+ ++ P +
Sbjct: 161 PVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNE----- 215
Query: 480 VSGHFTYGVIA----LSAATFVFWNLFG-AHVLPTAIQYGGPVSLALQLSCSVLRKETSI 534
IA L+ T +F L A + P A GG +S+ + ++ V T+I
Sbjct: 216 ---------IALTILLAGLTIIF--LLVVATLPPFAAYSGGALSITVLVALLVCLIPTTI 264
Query: 535 CCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVT 594
LS A G ++ G +E V+T++ DKTGT+T+G +
Sbjct: 265 GGLLS-------AIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQAS 317
Query: 595 KVVTSGSLTDPNSKQNPIHPLSETEILKFA--AGVESNTVHPIGKAIVEAAEFSNCQNVK 652
+ + P+ ++E E+ A + + T P G++IV A+ Q
Sbjct: 318 EFL-------------PVPGVTEEELADAAQLSSLADET--PEGRSIVVLAK----QRFN 358
Query: 653 V-------ADGTFIEEPG----SGT-VAIIEDRKVSVGTI-DWLRSHGVDTSTFQEVEME 699
+ TF+ SG + E RK +V I ++ S+G + ++
Sbjct: 359 LRERDLQSLHATFVPFSAQTRMSGVDLDGREIRKGAVDAIRRYVESNGGHFPAELDAAVD 418
Query: 700 DLMNQS---LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEY 756
++ + LV V DN + G+IY++D ++ L GI M++GD +A
Sbjct: 419 EVARKGGTPLV-VAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAA 477
Query: 757 VASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGG 816
+A+ G+ D L+ P +K I + Q + +VAM GDG NDA ALA + +GVAM G
Sbjct: 478 IAAEAGV--DDFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSG 535
Query: 817 VGAASEVASVV 827
AA E ++V
Sbjct: 536 TQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 9e-28
Identities = 122/500 (24%), Positives = 220/500 (44%), Gaps = 63/500 (12%)
Query: 369 VDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIP 428
+ D +I+ + L G + V G++IP DG V G +TVDES+ TGE PV K
Sbjct: 109 IKQDGSYEMIDA--SDLKKGHIVRVATGEQIPNDGKVIKGLATVDESAITGESAPVIKES 166
Query: 429 ESE---VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFT 485
+ V G+ + L VE+ G + + ++ LVE A ++ P +
Sbjct: 167 GGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNE----------- 215
Query: 486 YGVIALSAATFVFWNLFGAHVL---PTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCP 542
IAL +F +L P A +S+A+ ++ +V T+I LS
Sbjct: 216 ---IALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLIPTTIGGLLS--- 269
Query: 543 WLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSL 602
A G +L + G +E VN ++ DKTGT+T G + +
Sbjct: 270 ----AIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI----- 320
Query: 603 TDPNSKQNPIHPLSETEILK-----FAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGT 657
P+ + + + + + +T P G++IV+ A + ++ G
Sbjct: 321 -----------PVKSSSFERLVKAAYESSIADDT--PEGRSIVKLAYKQHI-DLPQEVGE 366
Query: 658 FIEEPGSGTVAIIE--DRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQ------SLVYV 709
+I ++ ++ R+V G + + + V+++ L+ + + V
Sbjct: 367 YIPFTAETRMSGVKFTTREVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVV 426
Query: 710 GVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVL 769
DN + G+IY++D I+D L GI M +GD + +A +A G+ D+ +
Sbjct: 427 LEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV--DRFV 484
Query: 770 SGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLM 829
+ KP +K I E Q ++VAM GDG NDA ALA +++G+AM G +A E A+++ +
Sbjct: 485 AECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDL 544
Query: 830 GNRLSQLLVALELSRLTMKT 849
+ ++L+ + + + + T
Sbjct: 545 DSNPTKLMEVVLIGKQLLMT 564
|
Length = 673 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 5e-22
Identities = 131/555 (23%), Positives = 209/555 (37%), Gaps = 100/555 (18%)
Query: 348 IKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA 407
KA + + L L KAR+L D E+P + L GD + + GD +PAD +
Sbjct: 77 NKAGNAVEALKQSLAPKARVLRDG----KWQEIPASELVPGDVVRLKIGDIVPADCRLFE 132
Query: 408 GRS-TVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEA 466
G VD+++ TGE LPVTK +GS G V G T G LV+
Sbjct: 133 GDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQST 192
Query: 467 QSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAI-QYGGPVSLALQLSC 525
+ SGH + + V + L G LQ +
Sbjct: 193 -----------ETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFAL 241
Query: 526 SVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNI------LEKFAMVNTVV 579
+L I +M LS V ++GA L + I +E+ A ++ +
Sbjct: 242 VLLVGGIPI----AMPAVLS-----VTMAVGAAE--LAKKKAIVTRLTAIEELAGMDILC 290
Query: 580 FDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFA--AGVESNTVHPIGK 637
DKTGTLT+ + + +++ + D + +L +A A E + I
Sbjct: 291 SDKTGTLTLNKLSIDEILPFFNGFDKDD------------VLLYAALASREEDQ-DAIDT 337
Query: 638 AIV-EAAEFSN-CQNVKVADGTFIEEPGSGTVAIIEDR------KVSVGT----IDWLRS 685
A++ A + KV + + T A +ED KV+ G +D
Sbjct: 338 AVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILD--LC 395
Query: 686 HGVDTSTFQEVE--MEDLMNQSLVYVGVDNM-------LAGLIYVEDRIRDDAAHVVNSL 736
++VE +++L ++ +GV GL+ + D R D +
Sbjct: 396 DNKKEIE-EKVEEKVDELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERA 454
Query: 737 SSQGIGVYMLSGDKKNSAEYVASLVGI----------PKDKV-----------------L 769
G+ V M++GD A+ A +G+ K
Sbjct: 455 RHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGLGEMVEDADGF 514
Query: 770 SGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLM 829
+ V P K + LQ ++V M GDG+NDA AL + +G+A+ G AA A +VL
Sbjct: 515 AEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLT 574
Query: 830 GNRLSQLLVALELSR 844
LS ++ A+ SR
Sbjct: 575 EPGLSVIVDAILESR 589
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 86.2 bits (213), Expect = 3e-19
Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 65/243 (26%)
Query: 575 VNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHP 634
+ VVFD GTLT G PVV +L+ AA
Sbjct: 1 IKAVVFDLDGTLTDGEPVVP---------------------EAEALLEAAA--------A 31
Query: 635 IGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQ 694
+G AIV AA + G + +R + +
Sbjct: 32 LGVAIVIAAG---------------------------ENLTKEGREELVRRLLLRALAGE 64
Query: 695 EVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSA 754
E+ E L + V +D ++ GLI + D + A + L GI + +L+GD + +A
Sbjct: 65 ELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTA 124
Query: 755 EYVASLVGIPKDKVLSGV-------KPNEK--KRFINELQNDENVVAMVGDGINDAAALA 805
+A L+G+ V + + KP+ K + + EL V MVGDG+ND A
Sbjct: 125 NAIARLLGLFDALVSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMVGDGVNDIPAAK 184
Query: 806 SSH 808
++
Sbjct: 185 AAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 8e-17
Identities = 125/614 (20%), Positives = 219/614 (35%), Gaps = 156/614 (25%)
Query: 375 DSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTV-DESSFTGEPLPVTKIPESE-- 431
++ + + VGD + + GD +PADGV +G S DESS TGE P+ K P +
Sbjct: 175 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPF 234
Query: 432 VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQ----RLADQVSGH---- 483
+ +G++ G+ + V G + G ++ + +A P+Q LA +
Sbjct: 235 LLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGS 294
Query: 484 --------FTYGVI----------ALSAATFVFWNLFGAHVLPTAIQYGGP--VSLALQL 523
V A TF+ + ++ A+ G P V++AL
Sbjct: 295 AVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAY 354
Query: 524 SCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKT 583
S + K+ ++ L+ C E + DKT
Sbjct: 355 SMKKMMKDNNLVRHLAAC----------------------------ETMGSATAICSDKT 386
Query: 584 GTLTIGRPVVTK-----------------------------VVTSGSLTDPNSKQNPIHP 614
GTLT V + + S S +
Sbjct: 387 GTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFI 446
Query: 615 LSETE--ILKFA--AGVESNTVHPIGKAIVEAAEFSNCQN-----VKVADGT-------- 657
S+TE +L F + V K +V+ F++ + VK + G
Sbjct: 447 GSKTECALLDFGLLLLRDYQEVRAEEK-VVKIYPFNSERKFMSVVVKHSGGKYREFRKGA 505
Query: 658 ---------FIEEPGSGTVAIIEDRKVSVGTI------DWLRSHGVDTSTFQ--EVEMED 700
+ I +D K + D LR+ + F E +D
Sbjct: 506 SEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKD 565
Query: 701 LMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL 760
N+ L +GV + ++D +R V GI V M++GD ++A+ +A
Sbjct: 566 YPNKGLTLIGV-------VGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN 618
Query: 761 VGI-------------------------PKDKVLSGVKPNEKKRFINELQNDENVVAMVG 795
GI PK +VL+ P +K+ + L++ VVA+ G
Sbjct: 619 CGILTFGGLAMEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTG 678
Query: 796 DGINDAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNL 854
DG NDA AL + +G +MG G A E + ++L+ + + ++ A++ R +++ L
Sbjct: 679 DGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFL 738
Query: 855 WWAFGYNIVGIPIA 868
+ N+V + +
Sbjct: 739 QFQLTVNVVAVILT 752
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 84.1 bits (208), Expect = 2e-16
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 42/206 (20%)
Query: 686 HGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYM 745
D + F+ +E L ++GV ML D R + A + + GI V M
Sbjct: 512 LLSDPANFEAIE------SDLTFIGVVGML-------DPPRPEVADAIEKCRTAGIRVIM 558
Query: 746 LSGDKKNSAEYVASLVGI-----------------------------PKDKVLSGVKPNE 776
++GD K +AE + +GI + S V+P+
Sbjct: 559 ITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSH 618
Query: 777 KKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQL 836
K + LQ +VAM GDG+NDA AL + IG+AMG G A E + +VL + + +
Sbjct: 619 KSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATI 678
Query: 837 LVALELSRLTMKTVKQNLWWAFGYNI 862
+ A+E R +KQ + + NI
Sbjct: 679 VAAVEEGRAIYNNMKQFIRYMISSNI 704
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 5e-14
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 716 AGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---------- 765
GL+ + D R V +L + G+ + M++GD + +A +A +G+P
Sbjct: 520 LGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEK 579
Query: 766 ---------DKVLSGV------KPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIG 810
+++ V P K + + LQ +VVAM GDG+NDA AL + IG
Sbjct: 580 LDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIG 639
Query: 811 VAMG-GGVGAASEVASVVLMGNRLSQLLVALE 841
VAMG G A E A ++L + + +L A+E
Sbjct: 640 VAMGQTGTDVAKEAADMILTDDDFATILSAIE 671
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 2e-12
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALA 189
L V GMTC GC + +++ LE P V S V+L T A V + E L
Sbjct: 2 LSVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSP---------EELL 52
Query: 190 KHLTSCGFKSS 200
+ + G+K+
Sbjct: 53 EAIEDAGYKAR 63
|
HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 62.6 bits (152), Expect = 2e-11
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 741 IGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGIND 800
+ +Y+ SGD+K S +A VGIP ++V +G P K + I EL+ V MVG+G ND
Sbjct: 46 VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGAND 105
Query: 801 AAALASSHIGVAMGGGVGAASEV--ASVVLMGNRLSQLLVALELSRL 845
AL + +G+ G + + V++ L + + S L
Sbjct: 106 ILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKDTSEL 152
|
Length = 152 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 2e-10
Identities = 76/309 (24%), Positives = 123/309 (39%), Gaps = 57/309 (18%)
Query: 388 GDHIVVLPGDRIPAD-GVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLN------ 440
GD + + GDR+PAD +V A ++DES+ TGE PV+K+ AA + +L
Sbjct: 138 GDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIA 197
Query: 441 --GTLTVE------VRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGH---FTYGVI 489
GTL V G T G + ++++ + + P+Q+ D + ++GVI
Sbjct: 198 FMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVI 257
Query: 490 ALSAATFVF----W-NLF--GAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCP 542
+ F W +F + AI G P+ + + L+ VLR
Sbjct: 258 GVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRM------------ 305
Query: 543 WLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSL 602
+ + ++R +E VN + DKTGTLT VTK+ TS L
Sbjct: 306 --------------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGL 351
Query: 603 TDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEP 662
++ N + L++ + V I+EA N + T + P
Sbjct: 352 ---HTMLNAV-SLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNP 407
Query: 663 GSGTVAIIE 671
VA+IE
Sbjct: 408 TD--VALIE 414
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 3e-10
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 23/148 (15%)
Query: 712 DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG 771
++ G + D ++ + +L GI V +L+GD + + VGI + L G
Sbjct: 503 QLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDANDFLLG 562
Query: 772 -----------------------VKPNEKKRFINELQNDENVVAMVGDGINDAAALASSH 808
+ P +K R I L+ + V +GDGINDA AL +
Sbjct: 563 ADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKAD 622
Query: 809 IGVAMGGGVGAASEVASVVLMGNRLSQL 836
+G+++ A E + ++L+ L L
Sbjct: 623 VGISVDTAADIAKEASDIILLEKSLMVL 650
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 4e-10
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 30/172 (17%)
Query: 696 VEMEDLMNQSLVYVGVDN---MLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKN 752
V + L + Y D +L G I D ++ A + +L + G+ V +L+GD +
Sbjct: 519 VATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSEL 578
Query: 753 SAEYVASLVGIPKDKVLSG-----------------------VKPNEKKRFINELQNDEN 789
A V VG+ +VL G + P K+R + L+ + +
Sbjct: 579 VAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGH 638
Query: 790 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841
VV +GDGINDA AL ++ IG+++ G V A E A ++L L + L+ LE
Sbjct: 639 VVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIIL----LEKSLMVLE 686
|
Length = 902 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 5e-10
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 43/192 (22%)
Query: 689 DTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG 748
D E L ++G LI + D R+++A V GI V+ML+G
Sbjct: 618 DDQLKNETLNRATAESDLEFLG-------LIGIYDPPRNESAGAVEKCHQAGINVHMLTG 670
Query: 749 DKKNSAEYVASLVGI-PKD-----------KVLSGVK----------------------- 773
D +A+ +A VGI P + V++G +
Sbjct: 671 DFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCA 730
Query: 774 PNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASVVLMGNR 832
P K + I L + AM GDG+ND+ +L +++G+AMG G A + + +VL +
Sbjct: 731 PQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDN 790
Query: 833 LSQLLVALELSR 844
+ +L A+E R
Sbjct: 791 FASILNAIEEGR 802
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 6e-09
Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 66/238 (27%)
Query: 716 AGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI------------ 763
GLI + D R V S GI V M++GD +A+ +A VGI
Sbjct: 560 VGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIA 619
Query: 764 -----------PKDK---VLSGVK-------------------------PNEKKRFINEL 784
P+D V+ G P +K +
Sbjct: 620 ARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGC 679
Query: 785 QNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELS 843
Q +VA+ GDG+ND+ AL + IGVAMG G + + A ++L+ + + ++ +E
Sbjct: 680 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEG 739
Query: 844 RLTMKTVKQNLWWAFGYNI-----------VGIPIAAG---VLLPVTGTMLTPSIAGA 887
RL +K+++ + NI IP+ G +L GT + P+I+ A
Sbjct: 740 RLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLA 797
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 1e-08
Identities = 20/41 (48%), Positives = 23/41 (56%)
Query: 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVW 169
L V GMTC GCA V++ L P VSS SV+L T V
Sbjct: 1 TLRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVT 41
|
Length = 62 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 3e-07
Identities = 73/283 (25%), Positives = 116/283 (40%), Gaps = 47/283 (16%)
Query: 330 IMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGD 389
++L A V++ + K++ M ++P +A ++ D + + + + VGD
Sbjct: 108 VVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEK----MSINAEQVVVGD 163
Query: 390 HIVVLPGDRIPAD-GVVRAGRSTVDESSFTGEPLPVTKIPE---------SEVAAGSIN- 438
+ V GDRIPAD ++ A VD SS TGE P T+ PE +A S N
Sbjct: 164 LVEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNC 223
Query: 439 LNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTY---GV-IALSAA 494
+ GT V G T MG I L ++ + P+ A ++ HF + GV + L +
Sbjct: 224 VEGTARGIVVNTGDRTVMGRIASLASGLENGKTPI---AIEIE-HFIHIITGVAVFLGVS 279
Query: 495 TFVFWNLFGAHVLPTAIQYGG----PVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSY 550
F+ + G L I G V L + +V CL++
Sbjct: 280 FFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTV---------CLTLT--------- 321
Query: 551 VGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVV 593
A + L++ +E +T+ DKTGTLT R V
Sbjct: 322 --AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTV 362
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 3e-06
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIV 168
L V GMTCG C +V++ LE V+S V+L TA V
Sbjct: 6 LKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATV 44
|
Length = 71 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 6e-06
Identities = 59/199 (29%), Positives = 81/199 (40%), Gaps = 30/199 (15%)
Query: 299 LVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLL 358
L LGA+S T AA V L M+ LL N Q A+ +D L
Sbjct: 109 LTILGAISYATEDLFAAGVIAL----------MVAISTLL--NFIQEARSTKAAD--ALK 154
Query: 359 GILPSKARLL-VDNDAKDS-IIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRST-VDES 415
++ + A +L V ND ++ +E+P + L GD I + GD IPAD + R V ++
Sbjct: 155 AMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQA 214
Query: 416 SFTGEPLPVTKIPESEVAAGSINL-------------NGTLTVEVRRPGGETAMGDIVRL 462
S TGE LPV K + S L +GT V G T G +
Sbjct: 215 SLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGR 274
Query: 463 VEEAQSREAPVQRLADQVS 481
V E S Q+ +VS
Sbjct: 275 VSEQDSEPNAFQQGISRVS 293
|
Length = 902 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 1e-05
Identities = 68/272 (25%), Positives = 104/272 (38%), Gaps = 48/272 (17%)
Query: 388 GDHIVVLPGDRIPAD-GVVRAGRSTVDESSFTGEPLPVTKIPES-----EVAAGSINL-- 439
GD + + GD++PAD V+ VD+S TGE + V K ES V N+
Sbjct: 94 GDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLF 153
Query: 440 NGTLTVE------VRRPGGETAMGDIVRLVEEAQSREAPVQR----LADQVSGHFTYGVI 489
+GTL V V R G T +G I + A+ + P+Q+ + +S I
Sbjct: 154 SGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICI 213
Query: 490 ALSAATFVFWNLF--GAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHA 547
+ +N G + AI Y +++AL ++ I CL++
Sbjct: 214 LVWVINIGHFNDPALGGGWIQGAIYY-FKIAVALAVAAIPEGLPAVITTCLAL------- 265
Query: 548 YSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNS 607
GT A + ++R +E + DKTGTLT + V KVV
Sbjct: 266 ----GTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDP------ 315
Query: 608 KQNPIHPLSETEILKFAAGVESNTVHPIGKAI 639
S + + +F V T P G I
Sbjct: 316 --------SSSSLNEFC--VTGTTYAPEGGVI 337
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 1e-05
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 763 IPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAM 813
+ V + + P++K+ + LQ + V M GDG ND AL + +G+++
Sbjct: 776 LSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISL 826
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 3e-05
Identities = 71/307 (23%), Positives = 124/307 (40%), Gaps = 52/307 (16%)
Query: 349 KATSDMTGLLGILPSKARLLVD--NDAKDSIIEVPCNSLHVGDHIVVLPGDRIPAD-GVV 405
KA M L + A ++ + +DA DS VP GD ++ GD IPAD ++
Sbjct: 104 KAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVP------GDICLLKTGDTIPADLRLI 157
Query: 406 RAGRSTVDESSFTGEPLPVTKIP------ESEVAAGS-INLNGTLTVEVR--------RP 450
DE+ TGE LPV K E + G INL + + +
Sbjct: 158 ETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIAT 217
Query: 451 GGETAMGDIVR-------LVEEAQSREAPVQRLAD----QVSGHFTYGVIALSAATFVFW 499
+ +G I L + + + +R + +V+ T + L+ T +
Sbjct: 218 ALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHR 277
Query: 500 NLFGAHVLPTAIQYGGPVSLALQLSCSV---LRKETS---ICCCLSMCPWLSHAYSYVGT 553
L V+ I + A+ + + + KE + IC +S+ P A +
Sbjct: 278 KLSKLAVILFCIA----IIFAIIVMAAHKFDVDKEVAIYAICLAISIIPESLIAVLSITM 333
Query: 554 SLGA----TRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKV--VTSGSLTDPNS 607
++GA R +++R + LE VN + DKTGT+T G+ + ++ G+++ NS
Sbjct: 334 AMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393
Query: 608 KQNPIHP 614
+ +P
Sbjct: 394 -DDAFNP 399
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|215598 PLN03138, PLN03138, Protein TOC75; Provisional | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 3e-05
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 20/95 (21%)
Query: 38 LTSISTQTLPFASLSRRKFSAV-LPPHIRCRLECMSSCAA-------------------S 77
L+S Q F+S S + + I+C +S +A +
Sbjct: 16 LSSSRPQLSSFSSRSPQSATRSPRASSIKCSASASASSSATSSSASLVANGAVALLSASA 75
Query: 78 FGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKL 112
GG GG GG GGGGGGG GG G +L
Sbjct: 76 ISGGGGGGGGGFGGFGGGGGGGGGGGGGWRFWLRL 110
|
Length = 796 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 6e-05
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 27/148 (18%)
Query: 717 GLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVK--- 773
G + D ++ AA + +L G+ V +L+GD + VG+ + L G +
Sbjct: 543 GFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEA 602
Query: 774 --------------------PNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAM 813
P +K R + LQ + + V +GDGINDA AL + +G+++
Sbjct: 603 MDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISV 662
Query: 814 GGGVGAASEVASVVLMGNRLSQLLVALE 841
G A E A ++L L + L+ LE
Sbjct: 663 DSGADIAKESADIIL----LEKSLMVLE 686
|
Length = 903 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 19/102 (18%)
Query: 733 VNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP---------KDKVLSG------VKPNEK 777
V +L +G V ++SG AE+V +G+ +D L+G V + K
Sbjct: 94 VKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYK 153
Query: 778 KRFINELQNDENV----VAMVGDGINDAAALASSHIGVAMGG 815
+ + L E + VGDG ND + + ++ +G+A
Sbjct: 154 GKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNA 195
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|180777 PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 2e-04
Identities = 21/39 (53%), Positives = 22/39 (56%)
Query: 79 GAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGG 117
G+ GG GGD GG GGGGGGG GG G GGR
Sbjct: 113 GSGGGGGGGDEGGYGGGGGGGGGGYGGESRSGGGGGRAS 151
|
Length = 182 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 4e-04
Identities = 26/127 (20%), Positives = 50/127 (39%), Gaps = 12/127 (9%)
Query: 727 DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSGV-------KPNEK 777
++ +L S G + +++ + + + +G+ D ++ G P
Sbjct: 92 PGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPL 151
Query: 778 KRFINELQNDENVVAMVGDGINDA-AALAS--SHIGVAMGGGVGAASEVASVVLMGNRLS 834
+ +L D MVGD +ND AA A+ +GV G A ++ + L+
Sbjct: 152 LLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLA 211
Query: 835 QLLVALE 841
+LL L
Sbjct: 212 ELLALLA 218
|
Length = 220 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 19/109 (17%)
Query: 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP---------KDKVLSG-- 771
R+ A +V +L + G V ++SG E +A +GI D L+G
Sbjct: 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRV 135
Query: 772 ----VKPNEKKRFINELQNDENV----VAMVGDGINDAAALASSHIGVA 812
K + + EL + + GD ND L ++ + +A
Sbjct: 136 VGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIA 184
|
Length = 212 |
| >gnl|CDD|240291 PTZ00146, PTZ00146, fibrillarin; Provisional | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 6e-04
Identities = 20/41 (48%), Positives = 22/41 (53%)
Query: 77 SFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGG 117
FG G G GGGG GGGG GG GG + + GG GG
Sbjct: 5 GFGGGRGGGRGGGGGGGRGGGGRGGGRGGGRGRGRGGGGGG 45
|
Length = 293 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 0.001
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 29/113 (25%)
Query: 377 IIEVPCNSLHVGDHIVVLPGDR---IPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVA 433
+ + + L GD IV +P +P D V+ +G V+ES TGE +PV K P +
Sbjct: 239 WVTIASDELVPGD-IVSIPRPEEKTMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNG 297
Query: 434 AGSINL------------NGTLTVEVR-------------RPGGETAMGDIVR 461
+L GT +++R R G T+ G +VR
Sbjct: 298 DDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVR 350
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|180777 PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 20/39 (51%), Positives = 20/39 (51%)
Query: 79 GAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGG 117
G GGS GG GG GG GGG GG GG G GG
Sbjct: 109 GGRGGSGGGGGGGDEGGYGGGGGGGGGGYGGESRSGGGG 147
|
Length = 182 |
| >gnl|CDD|240291 PTZ00146, PTZ00146, fibrillarin; Provisional | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.001
Identities = 19/40 (47%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 78 FGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGG 117
G G GG GGGG GGG GG G GGRGG
Sbjct: 10 RGGGRGGGGGGGRGGGGRGGGRGGGRGRGRGGGG-GGRGG 48
|
Length = 293 |
| >gnl|CDD|240291 PTZ00146, PTZ00146, fibrillarin; Provisional | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.001
Identities = 19/40 (47%), Positives = 20/40 (50%)
Query: 78 FGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGG 117
G G G GGGGGGG G GG GG + GRGG
Sbjct: 2 MGGGFGGGRGGGRGGGGGGGRGGGGRGGGRGGGRGRGRGG 41
|
Length = 293 |
| >gnl|CDD|184298 PRK13748, PRK13748, putative mercuric reductase; Provisional | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.002
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIV 168
L + GMTC CAA VK LE P V SA V+ +A +
Sbjct: 2 TTLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQL 42
|
Length = 561 |
| >gnl|CDD|219320 pfam07172, GRP, Glycine rich protein family | Back alignment and domain information |
|---|
Score = 37.8 bits (88), Expect = 0.002
Identities = 21/39 (53%), Positives = 21/39 (53%)
Query: 79 GAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGG 117
G GG GG GGG GGGGG GG GG GG GG
Sbjct: 51 GYGGGGGGGYGGGGYYGGGGGYGGGGGGYPGGGGGGYGG 89
|
This family of proteins includes several glycine rich proteins as well as two nodulins 16 and 24. The family also contains proteins that are induced in response to various stresses. Length = 91 |
| >gnl|CDD|240291 PTZ00146, PTZ00146, fibrillarin; Provisional | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.004
Identities = 18/41 (43%), Positives = 18/41 (43%)
Query: 77 SFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGG 117
G G GG GG GGG G G GG GG GG G
Sbjct: 16 GGGGGGRGGGGRGGGRGGGRGRGRGGGGGGRGGGGGGGPGK 56
|
Length = 293 |
| >gnl|CDD|225090 COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.004
Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 28/125 (22%)
Query: 679 TIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVN---S 735
T D L++HG+ V + +DN L V D +
Sbjct: 19 TPDILKAHGIKG----------------VILDLDNTL-----VPWDNPDATPELRAWLAE 57
Query: 736 LSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKK--RFINELQNDENVVAM 793
L GI V ++S +K++ A +G+P + KP + R + E+ V M
Sbjct: 58 LKEAGIKVVVVSNNKESRVARAAEKLGVPF--IYRAKKPFGRAFRRALKEMNLPPEEVVM 115
Query: 794 VGDGI 798
VGD +
Sbjct: 116 VGDQL 120
|
Length = 175 |
| >gnl|CDD|164795 PHA00370, III, attachment protein | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.004
Identities = 18/38 (47%), Positives = 21/38 (55%)
Query: 79 GAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRG 116
G GG +GG GG GGGG GGS+GG + L G
Sbjct: 103 GNTGGGSGGGDTGGSGGGGSDGGGSEGGSTGKSLTKEG 140
|
Length = 297 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 937 | |||
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.97 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.71 | |
| PF00403 | 62 | HMA: Heavy-metal-associated domain; InterPro: IPR0 | 99.27 | |
| COG2608 | 71 | CopZ Copper chaperone [Inorganic ion transport and | 99.22 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.04 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.94 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.89 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.87 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.77 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.75 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.71 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.65 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.65 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.63 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.61 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.6 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.54 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.54 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.51 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.51 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.49 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.47 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.44 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.41 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.38 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.36 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.35 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.3 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.29 | |
| PLN02887 | 580 | hydrolase family protein | 98.28 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.18 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.18 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.13 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.07 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.99 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.98 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.98 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.95 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.91 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.87 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.78 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.7 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 97.7 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.67 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.67 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 97.53 | |
| TIGR00003 | 68 | copper ion binding protein. This model describes a | 97.53 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.48 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.43 | |
| PLN02957 | 238 | copper, zinc superoxide dismutase | 97.43 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.41 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.35 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.3 | |
| KOG4656 | 247 | consensus Copper chaperone for superoxide dismutas | 97.3 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.27 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.1 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.07 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.06 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.04 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.04 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.02 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.01 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.98 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.96 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.92 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.92 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.9 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.89 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.87 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 96.84 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.8 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.76 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.65 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.61 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.6 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.58 | |
| KOG1603 | 73 | consensus Copper chaperone [Inorganic ion transpor | 96.55 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.5 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.5 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.48 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.46 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.44 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.43 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.41 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.34 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.32 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.29 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.16 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.12 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.07 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.0 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.99 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.96 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.96 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.95 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.8 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.71 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.69 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.68 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.66 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 95.59 | |
| PLN02940 | 382 | riboflavin kinase | 95.56 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 95.2 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.16 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 95.14 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.06 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 94.85 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.82 | |
| PLN02811 | 220 | hydrolase | 94.76 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 94.75 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.74 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 94.72 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 94.7 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 94.64 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 94.51 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 94.24 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 94.11 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 92.98 | |
| PLN03017 | 366 | trehalose-phosphatase | 92.85 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 92.82 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 92.54 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.49 | |
| COG4907 | 595 | Predicted membrane protein [Function unknown] | 92.46 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 92.34 | |
| TIGR02052 | 92 | MerP mercuric transport protein periplasmic compon | 91.99 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 91.5 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 91.21 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 90.61 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 90.56 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 90.29 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 90.23 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 90.19 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 90.13 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 88.97 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 87.84 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 85.87 | |
| COG2177 | 297 | FtsX Cell division protein [Cell division and chro | 84.96 | |
| PLN02151 | 354 | trehalose-phosphatase | 84.6 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 84.19 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 83.61 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 82.98 | |
| PRK13748 | 561 | putative mercuric reductase; Provisional | 82.07 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 81.47 | |
| PLN03138 | 796 | Protein TOC75; Provisional | 81.41 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 80.57 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 80.51 | |
| cd00371 | 63 | HMA Heavy-metal-associated domain (HMA) is a conse | 80.49 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 80.03 |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-140 Score=1237.87 Aligned_cols=707 Identities=41% Similarity=0.600 Sum_probs=640.0
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcc-cchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKV-IPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~-~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
.+..+.|+||+|++|+++|| .|++++||.+++||+.++++.|.||++..+ . +++.+.+++.||.+.....
T Consensus 2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~--------~~~~~~v~~~gy~~~~~~~ 72 (713)
T COG2217 2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLP--------ADIVAAVEKAGYSARLTAA 72 (713)
T ss_pred ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccH--------HHHHHHHHhcCcccccccc
Confidence 35789999999999999999 999999999999999999999999986554 3 7899999999998765111
Q ss_pred CCccchhhhhHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhhhhhhhHHHhhhhhHHHHHHHHHHhhccHHHHHH
Q 002310 205 GTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILD 284 (937)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~ 284 (937)
. ... +.+... +. +...+++.+++.+.+..++..+..+.+. ....|+.+++++++++|.|||||+.
T Consensus 73 ~-~~~----~~~~~~--~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~v~~~~g~~f~~~ 137 (713)
T COG2217 73 L-ADP----AEAEAR--LL-RELLRRLIIAGLLTLPLLLLSLGLLLGA-------FLLPWVSFLLATPVLFYGGWPFYRG 137 (713)
T ss_pred c-cch----hhhhhh--hh-hhHHHHHHHHHHHHHHHHHHHHHhhcch-------hhHHHHHHHHHHHHHHHHhHHHHHH
Confidence 0 000 000000 01 2234567777777666655544333321 2345788999999999999999999
Q ss_pred HHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCce
Q 002310 285 GVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSK 364 (937)
Q Consensus 285 a~~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~ 364 (937)
+|+.++++.+|||+|+++|++++|+||.|.++.+ .||++++++++|+++|+++|.+++.|+++++++|.++.|++
T Consensus 138 a~~~l~~~~~~md~Lv~la~~~A~~~s~~~~~~~-----~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~ 212 (713)
T COG2217 138 AWRALRRGRLNMDTLVALATIGAYAYSLYATLFP-----VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKT 212 (713)
T ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhhh-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCE
Confidence 9999999999999999999999999999998874 89999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCccccceeeecceEE
Q 002310 365 ARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLT 444 (937)
Q Consensus 365 ~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~ 444 (937)
++++++++ ++++||+++|++||+|.|+|||+||+||+|++|++.||||+|||||.|+.|.+||.|++||+|.+|.++
T Consensus 213 A~~~~~~~---~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~ 289 (713)
T COG2217 213 ATVVRGDG---EEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLT 289 (713)
T ss_pred EEEEecCC---cEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcEEeecchhhCCCCCEecCCCCEEeeeEEECCccEE
Confidence 99887643 389999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHH
Q 002310 445 VEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLS 524 (937)
Q Consensus 445 ~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~a 524 (937)
++|+++|.||++++|+++++++|.+|+|+|+++||++.+|+|.++++++++|++|++++. .+|..++.++
T Consensus 290 i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~----------~~~~~a~~~a 359 (713)
T COG2217 290 IRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGG----------GDWETALYRA 359 (713)
T ss_pred EEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC----------CcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999887653 3567899999
Q ss_pred HHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCC
Q 002310 525 CSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTD 604 (937)
Q Consensus 525 i~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~ 604 (937)
+++|++ +|||||+ +++|+++.+++.+++++||++|+++++|+++++|+++||||||||+|+|+|+++...
T Consensus 360 ~avLVI---aCPCALg--LAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~----- 429 (713)
T COG2217 360 LAVLVI---ACPCALG--LATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVAL----- 429 (713)
T ss_pred Hhheee---eCccHHH--hHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecC-----
Confidence 999999 9999999 999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcCeEEEeccHHHHH
Q 002310 605 PNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLR 684 (937)
Q Consensus 605 ~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~~~~l~ 684 (937)
++ +++++|++++++|.+|+||+++||++++++.+.. ....+++++|+|+.+.++++.+.+|+++++.
T Consensus 430 --------~~-~e~~~L~laAalE~~S~HPiA~AIv~~a~~~~~~----~~~~~~~i~G~Gv~~~v~g~~v~vG~~~~~~ 496 (713)
T COG2217 430 --------DG-DEDELLALAAALEQHSEHPLAKAIVKAAAERGLP----DVEDFEEIPGRGVEAEVDGERVLVGNARLLG 496 (713)
T ss_pred --------CC-CHHHHHHHHHHHHhcCCChHHHHHHHHHHhcCCC----CccceeeeccCcEEEEECCEEEEEcCHHHHh
Confidence 33 7889999999999999999999999999887632 2244899999999999999999999999999
Q ss_pred hcCCCCcc-hhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 685 SHGVDTST-FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 685 ~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
+++.+... .+..+..+.+|.++++++.|++++|+++++|++|+|++++|++||+.|++++|+||||+.+|++||+++||
T Consensus 497 ~~~~~~~~~~~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGI 576 (713)
T COG2217 497 EEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI 576 (713)
T ss_pred hcCCCccchhhhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCh
Confidence 88765543 23344556678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002310 764 PKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 764 ~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~ 843 (937)
+ +++|+++||||.++|++||++|++|+|||||+||+|||++||||||||+|+|+|+|+||++|++|++..+++++++|
T Consensus 577 d--~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~ls 654 (713)
T COG2217 577 D--EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLS 654 (713)
T ss_pred H--hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHH
Confidence 7 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhccc
Q 002310 844 RLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLK 906 (937)
Q Consensus 844 R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~ 906 (937)
|+++++||||++|+|+||+++||+|+++ +++|++|+++|.+||++|++|||||+..
T Consensus 655 r~t~~~IkqNl~~A~~yn~~~iplA~~g-------~l~p~~A~~am~~SSv~VvlNaLRL~~~ 710 (713)
T COG2217 655 RATRRIIKQNLFWAFGYNAIAIPLAAGG-------LLTPWIAALAMSGSSVLVVLNALRLLRS 710 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hcCHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 9999999999999999999999999866 4789999999999999999999999753
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-137 Score=1181.52 Aligned_cols=776 Identities=39% Similarity=0.557 Sum_probs=679.9
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccCC
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMG 205 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 205 (937)
..++|.|.||+|.+|+.+||+.+++++||.+++|++.++++.|.||++.+.+ .++.+.+++.||++......
T Consensus 146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~p--------r~i~k~ie~~~~~~~~~~~~ 217 (951)
T KOG0207|consen 146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGP--------RDIIKAIEETGFEASVRPYG 217 (951)
T ss_pred CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccCh--------HHHHHHHHhhcccceeeecc
Confidence 5799999999999999999999999999999999999999999999999998 78999999999998765532
Q ss_pred CccchhhhhHHHHHHHhhhhhccchhHHHHHHHHHHHHHHH-HHHhhh-----hhhhHHHhhhhhHHHHHHHHHHhhccH
Q 002310 206 TDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHL-SHILGA-----KASWIHVFHSTGFHLSLSLFTLLGPGF 279 (937)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~g~ 279 (937)
+....... +.++ +.+.+++.++.+..+.+++++..+ .+++.. .+.|+.+....++.++|+++++|..||
T Consensus 218 ~~~~~~~l--~~~~---ei~~w~~~fl~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~vqf~~G~ 292 (951)
T KOG0207|consen 218 DTTFKNSL--KHKE---EIRKWKRPFLISLGFSLPVSFAMIICPPLAWILALLVPFLPGLSYGNSLSFVLATPVQFVGGR 292 (951)
T ss_pred ccchhhhh--hhhh---HHHhcchHHHHHHHHHHHHHHHHHHhccchhhhhhhccccccchhhhHHHhhhheeeEEecce
Confidence 22211111 1112 233444555555555554433321 111110 022334455568899999999999999
Q ss_pred HHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcccC--cchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 002310 280 QLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLG--WKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGL 357 (937)
Q Consensus 280 ~~~~~a~~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~~~--~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l 357 (937)
+||.+||++|++++.|||+|+++++.++|+||.+.....-.. |..||+++.|++.|+.+|+|+|.++++|+..++.+|
T Consensus 293 ~fy~~A~ksL~~g~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskL 372 (951)
T KOG0207|consen 293 PFYLAAYKSLKRGSANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKL 372 (951)
T ss_pred eeHHHHHHHHhcCCCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHHHHHHHHHhhccchHHHHHH
Confidence 999999999999999999999999999999998766543222 789999999999999999999999999999999999
Q ss_pred hcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCcccccee
Q 002310 358 LGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSI 437 (937)
Q Consensus 358 ~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~ 437 (937)
+++.|.++.++.++. .+++|+.+.|++||+|.|+||++||+||+|++|+++||||++|||++||.|++|+.|.+||+
T Consensus 373 msl~p~~a~ii~~g~---~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss~VDEs~iTGEs~PV~Kk~gs~ViaGsi 449 (951)
T KOG0207|consen 373 MSLAPSKATIIEDGS---EEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSSEVDESLITGESMPVPKKKGSTVIAGSI 449 (951)
T ss_pred hhcCcccceEeecCC---cceEeeeeeeccCCEEEECCCCccccccEEEeCceeechhhccCCceecccCCCCeeeeeee
Confidence 999999999987632 38899999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcH
Q 002310 438 NLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPV 517 (937)
Q Consensus 438 ~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~ 517 (937)
|.+|++.++++++|.||.++||+++++++|.+|+|+|+++|+++.||+|+++++++++|++|.+++...+.........+
T Consensus 450 N~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~ 529 (951)
T KOG0207|consen 450 NLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAF 529 (951)
T ss_pred cCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998875433332223678
Q ss_pred HHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEE
Q 002310 518 SLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVV 597 (937)
Q Consensus 518 ~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~ 597 (937)
..+|+++++||++ +|||+|+ |++|+++++++..+|++|+|+|+++++|.+.++++++||||||||+|+|.|.++.
T Consensus 530 ~~a~~~aisVlvi---ACPCaLg--LATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~ 604 (951)
T KOG0207|consen 530 SHAFQLAISVLVI---ACPCALG--LATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFK 604 (951)
T ss_pred HHHHHhhheEEEE---ECchhhh--cCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEE
Confidence 8999999999999 9999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCe--eEEEEcCeEE
Q 002310 598 TSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSG--TVAIIEDRKV 675 (937)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g--~~~~i~~~~~ 675 (937)
... +..+..+++.++++.|++++||+++||++|++............++++.||+| +...+++.++
T Consensus 605 ~~~------------~~~~~~e~l~~v~a~Es~SeHPig~AIv~yak~~~~~~~~~~~~~~~~~pg~g~~~~~~~~~~~i 672 (951)
T KOG0207|consen 605 SLS------------NPISLKEALALVAAMESGSEHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPGEGIYVTVTVDGNEV 672 (951)
T ss_pred ecC------------CcccHHHHHHHHHHHhcCCcCchHHHHHHHHHhcccccCccccceeecccCCCcccceEEeeeEE
Confidence 873 23678999999999999999999999999999877544444446788899999 6788889999
Q ss_pred EeccHHHHHhcCCCCcc--hhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHH
Q 002310 676 SVGTIDWLRSHGVDTST--FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNS 753 (937)
Q Consensus 676 ~~G~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~t 753 (937)
.+|+.+|+.+++....+ .+..++.+..|++.+|++.|+++.|++.++|++|+|+..+|+.||++||+++|+||||..|
T Consensus 673 ~iGN~~~~~r~~~~~~~~i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~a 752 (951)
T KOG0207|consen 673 LIGNKEWMSRNGCSIPDDILDALTESERKGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAA 752 (951)
T ss_pred eechHHHHHhcCCCCchhHHHhhhhHhhcCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHH
Confidence 99999999999876542 2334456678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCCh
Q 002310 754 AEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRL 833 (937)
Q Consensus 754 A~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l 833 (937)
|.++|+++||+ .|||++.|+||.++|+.+|+++++|+|||||+||+|||++|||||+||.|+++|.|+|||||+.|||
T Consensus 753 A~svA~~VGi~--~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L 830 (951)
T KOG0207|consen 753 ARSVAQQVGID--NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDL 830 (951)
T ss_pred HHHHHHhhCcc--eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccch
Confidence 99999999987 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhcccccccccc
Q 002310 834 SQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKA 913 (937)
Q Consensus 834 ~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~ 913 (937)
.+++.++++||+++++||+|+.|+++||+++||+|+|+|.|+. +.|+||.|.++|.+||+.|++|||.|++++.+....
T Consensus 831 ~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~-~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~~~~ 909 (951)
T KOG0207|consen 831 RDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFG-IVLPPWMASLAMAASSVSVVLSSLLLKRYKKPTINK 909 (951)
T ss_pred hhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCc-cccCchHHHHHHHhhhHHHhhhHHHHhhcccccccc
Confidence 9999999999999999999999999999999999999999975 889999999999999999999999997776554221
Q ss_pred cc------CCCCCCccccccccccccccCC
Q 002310 914 SF------QAPSSRVNSNVDSHQLMDLKGK 937 (937)
Q Consensus 914 ~~------~~~~~~~~~~~~~~~~~~~~~~ 937 (937)
.. +..-.+.-.++.+|+=+|-||+
T Consensus 910 ~~~~e~~~~~~~~~~~~~~~~~~gl~~~~~ 939 (951)
T KOG0207|consen 910 LYRYEAETSSSIGQKSESVDLHRGLDDKGR 939 (951)
T ss_pred ceecccccccccccccccceEEeccccccc
Confidence 11 2222244455888887776653
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-115 Score=1079.47 Aligned_cols=724 Identities=32% Similarity=0.480 Sum_probs=626.5
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccCC
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMG 205 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 205 (937)
.+.++.++||+|.+|++.+|+.+.+.+||.++++|+.++++.+... .+. +++.+.++++||.+.+.++.
T Consensus 99 ~~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~---~s~--------~~I~~~I~~~Gy~a~~~~~~ 167 (834)
T PRK10671 99 DSQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGS---ASP--------QDLVQAVEKAGYGAEAIEDD 167 (834)
T ss_pred ceEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEcc---CCH--------HHHHHHHHhcCCCccccccc
Confidence 3678999999999999999999999999999999999999888632 222 56778889999987654321
Q ss_pred CccchhhhhHHHHHHHhhhhhccchhHHHHHHHHHHHHHHH-HHHhhhhhhhHHHhhhhhH-HHHHHHHHHhhccHHHHH
Q 002310 206 TDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHL-SHILGAKASWIHVFHSTGF-HLSLSLFTLLGPGFQLIL 283 (937)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~g~~~~~ 283 (937)
..... ..+...++ +.+...+++.+++++++..++..+ ..++...+.+. ..|+ .+++++++++|+|||||+
T Consensus 168 ~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~ 239 (834)
T PRK10671 168 AKRRE-RQQETAQA---TMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNR----SLWLVIGLITLAVMVFAGGHFYR 239 (834)
T ss_pred cchhh-hhhhhhHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccch----hHHHHHHHHHHHHHHHhhHHHHH
Confidence 11100 00000011 112223456666655543333211 10000001111 1244 256778999999999999
Q ss_pred HHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcc----cCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhc
Q 002310 284 DGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPK----LGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLG 359 (937)
Q Consensus 284 ~a~~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~----~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~ 359 (937)
+||++|+++.+|||+|+++|++++|++|++..+.+. .+.+.||++++++++|+++|+++|.+++.|+++.+++|.+
T Consensus 240 ~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~ 319 (834)
T PRK10671 240 SAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLD 319 (834)
T ss_pred HHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999998776431 1225699999999999999999999999999999999999
Q ss_pred CCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCccccceeee
Q 002310 360 ILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINL 439 (937)
Q Consensus 360 ~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~ 439 (937)
+.|++++++++ |++++|+.++|+|||+|.|++||+||+||+|++|++.||||+|||||.|+.|.+||.||+||+|.
T Consensus 320 l~p~~a~~~~~----~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~ 395 (834)
T PRK10671 320 LTPPTARVVTD----EGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQ 395 (834)
T ss_pred cCCCEEEEEeC----CcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceEEEeehhhcCCCCCEecCCCCEEEecceec
Confidence 99999999876 46789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHH
Q 002310 440 NGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSL 519 (937)
Q Consensus 440 ~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~ 519 (937)
+|.++++|+++|.+|.++||++++++++.+|+++|+.+|+++.+|++++++++++++++|++.+.. ..+..
T Consensus 396 ~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~---------~~~~~ 466 (834)
T PRK10671 396 DGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPA---------PQIVY 466 (834)
T ss_pred ceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---------hHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998765321 12456
Q ss_pred HHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEec
Q 002310 520 ALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTS 599 (937)
Q Consensus 520 ~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~ 599 (937)
++.+++++|++ +|||+|+ +++|+++..++.+++++||++|+++++|+++++|++|||||||||+|+|+|.++...
T Consensus 467 ~~~~a~~vlv~---acPcaL~--la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~ 541 (834)
T PRK10671 467 TLVIATTVLII---ACPCALG--LATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTF 541 (834)
T ss_pred HHHHHHHHHHH---hcccchh--hhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEcc
Confidence 78889999999 9999999 999999999999999999999999999999999999999999999999999998765
Q ss_pred CCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcCeEEEecc
Q 002310 600 GSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGT 679 (937)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~ 679 (937)
.+.++.+++.+++++|.++.||+++||+++++.... ....++++.+|+|+.+.+++..+.+|+
T Consensus 542 -------------~~~~~~~~l~~a~~~e~~s~hp~a~Ai~~~~~~~~~----~~~~~~~~~~g~Gv~~~~~g~~~~~G~ 604 (834)
T PRK10671 542 -------------NGVDEAQALRLAAALEQGSSHPLARAILDKAGDMTL----PQVNGFRTLRGLGVSGEAEGHALLLGN 604 (834)
T ss_pred -------------CCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCC----CCcccceEecceEEEEEECCEEEEEeC
Confidence 345677899999999999999999999998864322 223578899999999999999999999
Q ss_pred HHHHHhcCCCCcchh-hHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 002310 680 IDWLRSHGVDTSTFQ-EVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA 758 (937)
Q Consensus 680 ~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA 758 (937)
++++.+.+....... ..+..+..+.++++++.|++++|++.++|++||+++++|++|++.|++++|+|||+..++..++
T Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia 684 (834)
T PRK10671 605 QALLNEQQVDTKALEAEITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIA 684 (834)
T ss_pred HHHHHHcCCChHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 999987665432222 2233456788999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHH
Q 002310 759 SLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLV 838 (937)
Q Consensus 759 ~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~ 838 (937)
+++||+ .+++++.|++|.++++.+|++++.|+|+|||.||+|||++|||||+||+|++.++++||++++++++..|++
T Consensus 685 ~~lgi~--~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~ 762 (834)
T PRK10671 685 KEAGID--EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVAD 762 (834)
T ss_pred HHcCCC--EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHH
Confidence 999997 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhcc
Q 002310 839 ALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRL 905 (937)
Q Consensus 839 ~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~ 905 (937)
++++||+++++|+||++|++.||+++||+|+|+++|.+|++++|++|+++|.+||++|++||+||+.
T Consensus 763 ~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~ 829 (834)
T PRK10671 763 ALAISRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLR 829 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccceeehhhhHHhcC
Confidence 9999999999999999999999999999999999998898899999999999999999999999963
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-113 Score=1045.83 Aligned_cols=688 Identities=28% Similarity=0.388 Sum_probs=594.8
Q ss_pred CccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccccc
Q 002310 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (937)
Q Consensus 124 ~~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (937)
...+..+.++||+|++|++.+|+.+.+.+||..+++++.++++.+.|++... +.+.+.+++.||++...+
T Consensus 51 ~~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~----------~~I~~aI~~~Gy~a~~~~ 120 (741)
T PRK11033 51 SGTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIR----------AQVESAVQKAGFSLRDEQ 120 (741)
T ss_pred CCceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccch----------HHHHHHHHhccccccccc
Confidence 3456789999999999999999999999999999999999999999876521 457778899999876443
Q ss_pred CCCccchhhhhHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhhhhhhhHHHhhhhhHHHHHHHHHHhhccHHHHH
Q 002310 204 MGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLIL 283 (937)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~ 283 (937)
.... +...+ .++ ..++.+. + +..++..+ .+....+. ..|+.+++ ..++.||||++
T Consensus 121 ~~~~-------~~~~~---~~~--~~~~~~~--~-~~~~~~~~--~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~ 175 (741)
T PRK11033 121 AAAA-------APESR---LKS--ENLPLIT--L-AVMMAISW--GLEQFNHP-----FGQLAFIA---TTLVGLYPIAR 175 (741)
T ss_pred chhh-------hHHHH---HHH--HHHHHHH--H-HHHHHHHH--HHhhhhhH-----HHHHHHHH---HHHHHHHHHHH
Confidence 2110 00000 111 1112211 1 11111111 00000010 01333333 23677899999
Q ss_pred HHHHHHHcCCC-CchhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCC
Q 002310 284 DGVKSLFKGAP-NMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILP 362 (937)
Q Consensus 284 ~a~~~l~~~~~-~md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p 362 (937)
+||++++++++ |||+|++++++++++++. |++++++++++++|+++|.++++|+++.+++|.++.|
T Consensus 176 ~a~~~l~~~~~~~~~~L~~~a~~~a~~~~~-------------~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p 242 (741)
T PRK11033 176 KALRLIRSGSPFAIETLMSVAAIGALFIGA-------------TAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVP 242 (741)
T ss_pred HHHHHHHcCCCCCccHHHHHHHHHHHHHcc-------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999885 999999999999987652 4578899999999999999999999999999999999
Q ss_pred ceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCccccceeeecce
Q 002310 363 SKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGT 442 (937)
Q Consensus 363 ~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~ 442 (937)
.+++++|+ |++++|++++|+|||+|.|++||+||+||+|++|++.||||+|||||.|+.|.+||.||+||+|.+|.
T Consensus 243 ~~a~vir~----g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~ 318 (741)
T PRK11033 243 ETATRLRD----GEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGEKVPAGATSVDRL 318 (741)
T ss_pred CEEEEEEC----CEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcEEeecccccCCCCCEecCCCCeeccCCEEcCce
Confidence 99999976 58899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHH
Q 002310 443 LTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQ 522 (937)
Q Consensus 443 ~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~ 522 (937)
++++|+++|.+|.++||.+++++++.+++|+|+.+|+++.+|+++++++++++|++|+++. +.+|..++.
T Consensus 319 ~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~----------~~~~~~~i~ 388 (741)
T PRK11033 319 VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF----------AAPWQEWIY 388 (741)
T ss_pred EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------cCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999885542 235677889
Q ss_pred HHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCc
Q 002310 523 LSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSL 602 (937)
Q Consensus 523 ~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~ 602 (937)
+++++|++ +|||+|+ +++|+++..++.+++|+||++|+++++|+|+++|++|||||||||+|+|+|.+++..
T Consensus 389 ~a~svlvi---acPcaL~--latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~--- 460 (741)
T PRK11033 389 RGLTLLLI---GCPCALV--ISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPA--- 460 (741)
T ss_pred HHHHHHHH---hchhhhh--hhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEec---
Confidence 99999999 9999999 999999999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcCeEEEeccHHH
Q 002310 603 TDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDW 682 (937)
Q Consensus 603 ~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~~~~ 682 (937)
++.++++++.+++++|.++.||+++||++++++.+... ....++...+|+|+.+.+++..+.+|++++
T Consensus 461 ----------~~~~~~~~l~~aa~~e~~s~hPia~Ai~~~a~~~~~~~--~~~~~~~~~~g~Gv~~~~~g~~~~ig~~~~ 528 (741)
T PRK11033 461 ----------TGISESELLALAAAVEQGSTHPLAQAIVREAQVRGLAI--PEAESQRALAGSGIEGQVNGERVLICAPGK 528 (741)
T ss_pred ----------CCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCC--CCCcceEEEeeEEEEEEECCEEEEEecchh
Confidence 34567889999999999999999999999998877652 234677888999999999999999999999
Q ss_pred HHhcCCCCcchhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 002310 683 LRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG 762 (937)
Q Consensus 683 l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~G 762 (937)
+.+.. ....+..+..+.++.+++++++|++++|++.|+|++|+|++++|++|+++|++++|+|||++.+|.++|+++|
T Consensus 529 ~~~~~--~~~~~~~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lg 606 (741)
T PRK11033 529 LPPLA--DAFAGQINELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELG 606 (741)
T ss_pred hhhcc--HHHHHHHHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 86521 1111223345567899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 002310 763 IPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 763 I~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~ 842 (937)
|+ ++++++|+||.++|+.||+. +.|+|||||+||+|||++|||||+||+|+++++++||++++++++..|++++++
T Consensus 607 i~---~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~ 682 (741)
T PRK11033 607 ID---FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIEL 682 (741)
T ss_pred CC---eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHH
Confidence 95 78999999999999999965 589999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhccc
Q 002310 843 SRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLK 906 (937)
Q Consensus 843 ~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~ 906 (937)
||+++++||||+.|+++||++++|+++.+ +++||+|+++|.+||++|++||+|+..+
T Consensus 683 sr~~~~~I~~nl~~a~~~n~~~i~~a~~g-------~~~~~~a~~~~~~ss~~v~~Nslrl~~~ 739 (741)
T PRK11033 683 SRATHANIRQNITIALGLKAIFLVTTLLG-------ITGLWLAVLADSGATALVTANALRLLRK 739 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHcChHHHHHHHHHhhccc
Confidence 99999999999999999999999999743 3679999999999999999999998643
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-101 Score=913.12 Aligned_cols=558 Identities=43% Similarity=0.657 Sum_probs=521.1
Q ss_pred ccHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcc----cCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhH
Q 002310 277 PGFQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPK----LGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATS 352 (937)
Q Consensus 277 ~g~~~~~~a~~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~----~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~ 352 (937)
+|||||++||++++++++|||+|++++++++|++|++.++.+. .+++.||++++++++++++|+++|.++++|+++
T Consensus 1 ~g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~ 80 (562)
T TIGR01511 1 AGRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASD 80 (562)
T ss_pred CcHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999888642 234679999999999999999999999999999
Q ss_pred HHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCcc
Q 002310 353 DMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEV 432 (937)
Q Consensus 353 ~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v 432 (937)
.+++|.++.|.++++++++ |++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+||.|
T Consensus 81 ~~~~L~~~~p~~a~~~~~~---~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~~vdes~lTGEs~pv~k~~gd~V 157 (562)
T TIGR01511 81 ALSKLAKLQPSTATLLTKD---GSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGESEVDESLVTGESLPVPKKVGDPV 157 (562)
T ss_pred HHHHHHhcCCCEEEEEECC---CeEEEEEHHHCCCCCEEEECCCCEecCceEEEECceEEehHhhcCCCCcEEcCCCCEE
Confidence 9999999999999999864 4678999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhc
Q 002310 433 AAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQ 512 (937)
Q Consensus 433 ~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~ 512 (937)
|+||+|.+|.++++|+++|.+|.++||.+++++++.+|+|+|+.+|+++.+|++++++++++++++|.
T Consensus 158 ~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------ 225 (562)
T TIGR01511 158 IAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------ 225 (562)
T ss_pred EeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------------
Confidence 99999999999999999999999999999999999999999999999999999999999998888773
Q ss_pred cCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccE
Q 002310 513 YGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPV 592 (937)
Q Consensus 513 ~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~ 592 (937)
.++.+++++|++ +|||+|+ +++|+++..++.+++++||++|+++++|+|+++|++|||||||||+|+|+
T Consensus 226 ------~~~~~~~svlvv---acPcaL~--la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~ 294 (562)
T TIGR01511 226 ------FALEFAVTVLII---ACPCALG--LATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPT 294 (562)
T ss_pred ------HHHHHHHHHHHH---hccchhh--hHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEE
Confidence 256789999999 9999999 99999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcC
Q 002310 593 VTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIED 672 (937)
Q Consensus 593 v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~ 672 (937)
|.++... ++.++++++.+++++|+++.||+++||++++++.+.... ...++++.+|+|+.+.+++
T Consensus 295 v~~i~~~-------------~~~~~~~~l~~aa~~e~~s~HPia~Ai~~~~~~~~~~~~--~~~~~~~~~g~Gi~~~~~g 359 (562)
T TIGR01511 295 VTDVHVF-------------GDRDRTELLALAAALEAGSEHPLAKAIVSYAKEKGITLV--EVSDFKAIPGIGVEGTVEG 359 (562)
T ss_pred EEEEecC-------------CCCCHHHHHHHHHHHhccCCChHHHHHHHHHHhcCCCcC--CCCCeEEECCceEEEEECC
Confidence 9999765 334578899999999999999999999999987765432 2357888999999999999
Q ss_pred eEEEeccHHHHHhcCCCCcchhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHH
Q 002310 673 RKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKN 752 (937)
Q Consensus 673 ~~~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~ 752 (937)
+++.+|+++++.+.+..... .+.++.+.++++.|++++|++.++|++||+++++|++||+.|++++|+|||+..
T Consensus 360 ~~~~iG~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~ 433 (562)
T TIGR01511 360 TKIQLGNEKLLGENAIKIDG------KAEQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRK 433 (562)
T ss_pred EEEEEECHHHHHhCCCCCCh------hhhCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHH
Confidence 99999999999876654221 224678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCC
Q 002310 753 SAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR 832 (937)
Q Consensus 753 tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~ 832 (937)
+++.+++++||+ +|+++.|++|.++++.+|++++.|+|||||.||++|+++|||||+||.|++.+++.||+++++++
T Consensus 434 ~a~~ia~~lgi~---~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~ 510 (562)
T TIGR01511 434 TAKAVAKELGIN---VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRND 510 (562)
T ss_pred HHHHHHHHcCCc---EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCC
Confidence 999999999994 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHH
Q 002310 833 LSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIA 885 (937)
Q Consensus 833 l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a 885 (937)
+..|++++++||+++++|+||+.|+++||+++||+|+++++|+ |+.++|++|
T Consensus 511 l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~~~~-g~~~~p~~a 562 (562)
T TIGR01511 511 LNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYPI-GILLSPAVA 562 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-ccccCCCcC
Confidence 9999999999999999999999999999999999999999886 778999864
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-92 Score=837.48 Aligned_cols=533 Identities=37% Similarity=0.531 Sum_probs=496.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCC
Q 002310 296 MNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKD 375 (937)
Q Consensus 296 md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g 375 (937)
||+|++++++.+|+++. ||+ ++++++++++++++|.++++|+++.+++|.++.|.+++|+|+ |
T Consensus 1 ~~~l~~~a~~~~~~~~~------------~~~-~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~----g 63 (536)
T TIGR01512 1 VDLLMALAALGAVAIGE------------YLE-GALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRG----G 63 (536)
T ss_pred CcHHHHHHHHHHHHHhh------------HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEC----C
Confidence 79999999999997762 454 478889999999999999999999999999999999999987 5
Q ss_pred eEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCccccceeeecceEEEEEEecCCccH
Q 002310 376 SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETA 455 (937)
Q Consensus 376 ~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~V~~~G~~T~ 455 (937)
+++++++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+|+.||+||++.+|+++++|+++|.+|.
T Consensus 64 ~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~ 143 (536)
T TIGR01512 64 SLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADST 143 (536)
T ss_pred EEEEEEHHHCCCCCEEEEcCCCEeecceEEEeCcEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhccccc
Q 002310 456 MGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSIC 535 (937)
Q Consensus 456 ~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~ 535 (937)
+||+.+++++++.+++|+|+.+++++.+|++++++++++++++|+++.. +..++.++++++++ +|
T Consensus 144 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~svlv~---~~ 208 (536)
T TIGR01512 144 IAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR------------WPFWVYRALVLLVV---AS 208 (536)
T ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------------cHHHHHHHHHHHhh---cC
Confidence 9999999999999999999999999999999999999988888765432 12377889999999 99
Q ss_pred ccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCC
Q 002310 536 CCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPL 615 (937)
Q Consensus 536 Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~ 615 (937)
||+|+ +++|+++..++.+++++|+++|+++++|+++++|++|||||||||+|+|+|.++++
T Consensus 209 P~aL~--la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~----------------- 269 (536)
T TIGR01512 209 PCALV--ISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP----------------- 269 (536)
T ss_pred ccccc--cchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH-----------------
Confidence 99999 99999999999999999999999999999999999999999999999999999863
Q ss_pred CHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcCeEEEeccHHHHHhcCCCCcchhh
Q 002310 616 SETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQE 695 (937)
Q Consensus 616 ~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~~~~l~~~~~~~~~~~~ 695 (937)
.+++++++++|.++.||+++||++++++.+ ...++.+.+++|+.+.+++.++.+|+++++.+.+..
T Consensus 270 --~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~------~~~~~~~~~g~gi~~~~~g~~~~ig~~~~~~~~~~~------ 335 (536)
T TIGR01512 270 --AEVLRLAAAAEQASSHPLARAIVDYARKRE------NVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAAVGA------ 335 (536)
T ss_pred --HHHHHHHHHHhccCCCcHHHHHHHHHHhcC------CCcceEEecCCeEEEEECCeEEEEcCHHHHhhcCCc------
Confidence 268999999999999999999999998764 235677889999999999999999999998766542
Q ss_pred HHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCCceeEeccCh
Q 002310 696 VEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGI-GVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 774 (937)
Q Consensus 696 ~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI-~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~P 774 (937)
..+..+.+.+++++|+.+.|.+.++|++||+++++|++|+++|+ +++|+|||++.++..+++++||+ .+|+++.|
T Consensus 336 --~~~~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--~~f~~~~p 411 (536)
T TIGR01512 336 --RPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--EVHAELLP 411 (536)
T ss_pred --chhhCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh--hhhhccCc
Confidence 22345678899999999999999999999999999999999999 99999999999999999999997 78999999
Q ss_pred hhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeC-CChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHH
Q 002310 775 NEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQN 853 (937)
Q Consensus 775 e~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg-~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~n 853 (937)
++|.++++.++++++.|+|+|||.||++|+++||+||++| ++++.++++||++++++++..+.+++++||+++++|+||
T Consensus 412 ~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n 491 (536)
T TIGR01512 412 EDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQN 491 (536)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhc
Q 002310 854 LWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLR 904 (937)
Q Consensus 854 l~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~ 904 (937)
+.|++.||+++|++|+.+ +++||+|+++|.+||++|++||+|++
T Consensus 492 l~~a~~~n~~~i~~a~~G-------~~~p~~aa~~m~~ss~~v~~ns~r~~ 535 (536)
T TIGR01512 492 VVIALGIILLLILLALFG-------VLPLWLAVLGHEGSTVLVILNALRLL 535 (536)
T ss_pred HHHHHHHHHHHHHHHHHh-------hccHHHHHHHHcChHHHHHHHHHhhc
Confidence 999999999999999744 58999999999999999999999985
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-92 Score=839.36 Aligned_cols=551 Identities=41% Similarity=0.633 Sum_probs=504.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCC
Q 002310 296 MNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKD 375 (937)
Q Consensus 296 md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g 375 (937)
||+|++++++.+|++|. |.+++++++++++++++|.++++|+++.+++|.+..|.+++++|++ |
T Consensus 1 ~d~l~~~~~~~~~~~~~-------------~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~---g 64 (556)
T TIGR01525 1 MDLLMALATIAAYAMGL-------------VLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGD---G 64 (556)
T ss_pred CcHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECC---C
Confidence 89999999999998874 3467899999999999999999999999999999999999999874 3
Q ss_pred eEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCccccceeeecceEEEEEEecCCccH
Q 002310 376 SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETA 455 (937)
Q Consensus 376 ~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~V~~~G~~T~ 455 (937)
++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+|+.||+||.+.+|.++++|+++|.+|+
T Consensus 65 ~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~ 144 (556)
T TIGR01525 65 SEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDST 144 (556)
T ss_pred eEEEEEHHHCCCCCEEEECCCCEeccceEEEecceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhccccc
Q 002310 456 MGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSIC 535 (937)
Q Consensus 456 ~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~ 535 (937)
+|++.+++++++.+++|+|+.+++++.+|+++++++++++|++|++... . .++.++++++++ +|
T Consensus 145 ~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~-----------~--~~~~~~~~vlv~---~~ 208 (556)
T TIGR01525 145 LAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA-----------L--GALYRALAVLVV---AC 208 (556)
T ss_pred HHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------c--hHHHHHHHHHhh---cc
Confidence 9999999999999999999999999999999999999999998876532 1 577889999999 99
Q ss_pred ccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCC
Q 002310 536 CCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPL 615 (937)
Q Consensus 536 Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~ 615 (937)
||+|+ +++|+++..++.+++++|+++|+++++|+++++|++|||||||||+|+|+|.++...+.. ..
T Consensus 209 P~al~--l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~-----------~~ 275 (556)
T TIGR01525 209 PCALG--LATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDA-----------SI 275 (556)
T ss_pred ccchh--ehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCC-----------Cc
Confidence 99999 999999999999999999999999999999999999999999999999999999865210 01
Q ss_pred CHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCC-ceEEecCCeeEEEEcC-eEEEeccHHHHHhcCCCCcch
Q 002310 616 SETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADG-TFIEEPGSGTVAIIED-RKVSVGTIDWLRSHGVDTSTF 693 (937)
Q Consensus 616 ~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~-~~~~~~g~g~~~~i~~-~~~~~G~~~~l~~~~~~~~~~ 693 (937)
++++++.+++.+|.++.||+++||++++++.+.+... . ++.+.+++|+.+.+++ .++.+|+++++..........
T Consensus 276 ~~~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~~~~~~---~~~~~~~~~~gi~~~~~g~~~~~lg~~~~~~~~~~~~~~~ 352 (556)
T TIGR01525 276 SEEELLALAAALEQSSSHPLARAIVRYAKKRGLELPK---QEDVEEVPGKGVEATVDGQEEVRIGNPRLLELAAEPISAS 352 (556)
T ss_pred cHHHHHHHHHHHhccCCChHHHHHHHHHHhcCCCccc---ccCeeEecCCeEEEEECCeeEEEEecHHHHhhcCCCchhh
Confidence 2678899999999999999999999999887654321 3 6678899999999999 799999999984322221111
Q ss_pred -hhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCCceeEec
Q 002310 694 -QEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQG-IGVYMLSGDKKNSAEYVASLVGIPKDKVLSG 771 (937)
Q Consensus 694 -~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aG-I~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar 771 (937)
+..+....++.+.++++.|++++|.+.++|++||+++++|+.|+++| ++++|+|||+..++.++++++|++ .+|++
T Consensus 353 ~~~~~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--~~f~~ 430 (556)
T TIGR01525 353 PDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID--EVHAE 430 (556)
T ss_pred HHHHHHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--eeecc
Confidence 12233445788999999999999999999999999999999999999 999999999999999999999997 89999
Q ss_pred cChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHH
Q 002310 772 VKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVK 851 (937)
Q Consensus 772 ~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~ 851 (937)
+.|++|.++++.+|+.++.|+|+|||.||++|+++|||||++|++++.+++.||+++.++++..+++++++||+++++|+
T Consensus 431 ~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~ 510 (556)
T TIGR01525 431 LLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIK 510 (556)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccccccchHH-HHHHHhhhhHHHHHHHHhhh
Q 002310 852 QNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPS-IAGALMGLSSIGVMANSLLL 903 (937)
Q Consensus 852 ~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~-~a~~~m~~ssl~v~~nsl~l 903 (937)
||+.|+++||++++++|+++ +++|+ +|+++|.+||++|++||+|+
T Consensus 511 ~nl~~a~~~N~~~i~~a~~g-------~~~p~~~aa~~m~~ss~~v~lns~r~ 556 (556)
T TIGR01525 511 QNLAWALGYNLVAIPLAAGG-------LLPLWLLAVLLHEGSTVLVVLNSLRL 556 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------hcCHHHHHHHHHhchHHHHHHHhhcC
Confidence 99999999999999999866 36896 99999999999999999985
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-92 Score=862.79 Aligned_cols=508 Identities=23% Similarity=0.275 Sum_probs=446.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEe
Q 002310 327 EEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVR 406 (937)
Q Consensus 327 ~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll 406 (937)
.++++++++++++..++.++++++++.+++|.++.|.+++|+|+ |++++|+++||+|||+|.|++||+|||||+|+
T Consensus 56 ~~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rd----g~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi 131 (755)
T TIGR01647 56 VDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRD----GKWQEIPASELVPGDVVRLKIGDIVPADCRLF 131 (755)
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC----CEEEEEEhhhCcCCCEEEECCCCEEeceEEEE
Confidence 34567777888888899999999999999999999999999987 58999999999999999999999999999999
Q ss_pred ecc-eeeeeccccCCCcccccCCCCccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Q 002310 407 AGR-STVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFT 485 (937)
Q Consensus 407 ~G~-~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~ 485 (937)
+|+ +.||||+|||||.|+.|.+|+.+|+||.+.+|+++++|++||.+|.+|+|.+++++++.+++|+|+.+++++.+++
T Consensus 132 ~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~ 211 (755)
T TIGR01647 132 EGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLI 211 (755)
T ss_pred ecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHH
Confidence 998 8999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcC
Q 002310 486 YGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRG 565 (937)
Q Consensus 486 ~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~ 565 (937)
+++++++++++++|++.. +.++..++.++++++++ +|||+|+ +++|+++..+..+++|+|+++|+
T Consensus 212 ~~~~~~~~i~~~~~~~~~----------~~~~~~~~~~~i~vlv~---a~P~~Lp--~~~~~~la~g~~r~ak~gilvk~ 276 (755)
T TIGR01647 212 VLIGVLVLIELVVLFFGR----------GESFREGLQFALVLLVG---GIPIAMP--AVLSVTMAVGAAELAKKKAIVTR 276 (755)
T ss_pred HHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHH---hCCcchH--HHHHHHHHHHHHHHHhCCeEEcc
Confidence 999988888888776521 23567888999999999 9999999 99999999999999999999999
Q ss_pred chHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhc-ccCCCCChHHHHHHHHH
Q 002310 566 GNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGV-ESNTVHPIGKAIVEAAE 644 (937)
Q Consensus 566 ~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~-e~~s~hP~~~Ai~~~a~ 644 (937)
++++|+||++|+||||||||||+|+|+|.+++..+ +..++++++.+++.+ +..+.||+++||+++++
T Consensus 277 l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~------------~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~ 344 (755)
T TIGR01647 277 LTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFF------------NGFDKDDVLLYAALASREEDQDAIDTAVLGSAK 344 (755)
T ss_pred cHHHHhccCCcEEEecCCCccccCceEEEEEEecC------------CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999998652 114566788887755 57889999999999887
Q ss_pred hcCCcc---ccccCCceEEecCCeeEEEEc----CeE--EEeccHHHHHhcCCCCcch-----hhHHHHHhCCCeEEEEE
Q 002310 645 FSNCQN---VKVADGTFIEEPGSGTVAIIE----DRK--VSVGTIDWLRSHGVDTSTF-----QEVEMEDLMNQSLVYVG 710 (937)
Q Consensus 645 ~~~~~~---~~~~~~~~~~~~g~g~~~~i~----~~~--~~~G~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~v~ 710 (937)
+.+... .......|. ..++++.+.++ ++. +.||+++++.+.|...... +..++...+|.++++++
T Consensus 345 ~~~~~~~~~~~~~~~pf~-~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA 423 (755)
T TIGR01647 345 DLKEARDGYKVLEFVPFD-PVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVA 423 (755)
T ss_pred HhHHHHhcCceEEEeccC-CCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEE
Confidence 543100 001001111 14566666663 433 6789999999988643211 12234556788999998
Q ss_pred E-----CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------
Q 002310 711 V-----DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------- 766 (937)
Q Consensus 711 ~-----~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------- 766 (937)
+ +.+++|+++|+||+|||++++|++||++||+|+|+|||++.||.++|+++||...
T Consensus 424 ~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~ 503 (755)
T TIGR01647 424 RTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSG 503 (755)
T ss_pred EEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHH
Confidence 7 2389999999999999999999999999999999999999999999999999641
Q ss_pred ---------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHH
Q 002310 767 ---------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLL 837 (937)
Q Consensus 767 ---------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~ 837 (937)
.+|||++|+||.++|+.||++|++|+|+|||+||+|||++||||||||+|+|+|+++||+||++|+|+.|+
T Consensus 504 ~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~ 583 (755)
T TIGR01647 504 ELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIV 583 (755)
T ss_pred HHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHH
Confidence 29999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 838 VALELSRLTMKTVKQNLWWAFGYNIVGIP 866 (937)
Q Consensus 838 ~~i~~~R~~~~~i~~nl~~a~~~Nii~i~ 866 (937)
+++++||++++|||||+.|.++.|+..+.
T Consensus 584 ~ai~~gR~~~~ni~k~i~~~~~~n~~~~~ 612 (755)
T TIGR01647 584 DAILESRKIFQRMKSYVIYRIAETIRIVF 612 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 99999999999999999999999986554
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-91 Score=822.87 Aligned_cols=492 Identities=24% Similarity=0.297 Sum_probs=416.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCc-eEEE-EecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecc
Q 002310 332 LIAFVLLGKNLEQRAKIKATSDMTGLLGILPS-KARL-LVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR 409 (937)
Q Consensus 332 il~~~llg~~le~~~~~k~~~~l~~l~~~~p~-~~~v-~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~ 409 (937)
+++..+++.++|.++++|+++.+++|+++.|+ ++++ .|+ |++++|++++|+|||+|.|++||+|||||+|++|+
T Consensus 72 l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~rd----g~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~ 147 (673)
T PRK14010 72 LLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQD----GSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGL 147 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeC----CEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcc
Confidence 33445689999999999999999999999986 7874 444 58999999999999999999999999999999999
Q ss_pred eeeeeccccCCCcccccCCC---CccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHH
Q 002310 410 STVDESSFTGEPLPVTKIPE---SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTY 486 (937)
Q Consensus 410 ~~VDeS~LTGEs~pv~K~~g---~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~ 486 (937)
+.||||+|||||.|+.|.+| +.||+||.+.+|+++++|+++|.+|++|||++++++++.+|+|+|...+.+...+
T Consensus 148 ~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l-- 225 (673)
T PRK14010 148 ATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTL-- 225 (673)
T ss_pred eEEecchhcCCCCceeccCCCccCeeecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHH--
Confidence 99999999999999999999 8899999999999999999999999999999999999999999996655443222
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCc
Q 002310 487 GVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGG 566 (937)
Q Consensus 487 ~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~ 566 (937)
.+.++.+++|++.... + ..+...+.+.+++++. +|||+++ ..+|++...++.+++|+|+++|++
T Consensus 226 ---~ii~l~~~~~~~~~~~------~--~~~~~~~~~~val~V~---~IP~aL~--~~~~~~~~~g~~r~ak~gvLvk~~ 289 (673)
T PRK14010 226 ---TIIFLVVILTMYPLAK------F--LNFNLSIAMLIALAVC---LIPTTIG--GLLSAIGIAGMDRVTQFNILAKSG 289 (673)
T ss_pred ---hHHHHHHHHHHHHHHh------h--ccHHHHHHHHHHHHHH---hhhhhHH--HHHHHHHHHHHHHHhhCCEEEeCc
Confidence 2222222222211000 0 0223455566777777 8999999 999999999999999999999999
Q ss_pred hHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhc
Q 002310 567 NILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFS 646 (937)
Q Consensus 567 ~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~ 646 (937)
+++|++|++|++|||||||||+|++.+.++.+. .+.+.++++..++.++..+.||+++||++++++.
T Consensus 290 ~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~-------------~~~~~~~ll~~a~~~~~~s~~P~~~AIv~~a~~~ 356 (673)
T PRK14010 290 RSVETCGDVNVLILDKTGTITYGNRMADAFIPV-------------KSSSFERLVKAAYESSIADDTPEGRSIVKLAYKQ 356 (673)
T ss_pred HHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeC-------------CCccHHHHHHHHHHhcCCCCChHHHHHHHHHHHc
Confidence 999999999999999999999999888887643 2334567888888888899999999999999877
Q ss_pred CCccccccCC--ceEEe-cCCeeEEEEcCeEEEeccHHHHHhcCCCC----c-ch-hhHHHHHhCCCeEEEEEECCEEEE
Q 002310 647 NCQNVKVADG--TFIEE-PGSGTVAIIEDRKVSVGTIDWLRSHGVDT----S-TF-QEVEMEDLMNQSLVYVGVDNMLAG 717 (937)
Q Consensus 647 ~~~~~~~~~~--~~~~~-~g~g~~~~i~~~~~~~G~~~~l~~~~~~~----~-~~-~~~~~~~~~~~~~~~v~~~~~~lG 717 (937)
+++......+ .|... .++|+ .++++.+.||+++++.+.|... . .. +..++...+|.+++++..|++++|
T Consensus 357 ~~~~~~~~~~~~pF~~~~k~~gv--~~~g~~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~~~~lG 434 (673)
T PRK14010 357 HIDLPQEVGEYIPFTAETRMSGV--KFTTREVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNEILG 434 (673)
T ss_pred CCCchhhhcceeccccccceeEE--EECCEEEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEECCEEEE
Confidence 6542111111 12111 13344 3677889999999998766421 1 11 122334567889999999999999
Q ss_pred EEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCC
Q 002310 718 LIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDG 797 (937)
Q Consensus 718 ~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG 797 (937)
+++++|++|||++++|++||++||+++|+||||+.||.+||+++||+ ++|||++||||.++|+.+|++|++|+|+|||
T Consensus 435 ~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~--~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDG 512 (673)
T PRK14010 435 VIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD--RFVAECKPEDKINVIREEQAKGHIVAMTGDG 512 (673)
T ss_pred EEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--eEEcCCCHHHHHHHHHHHHhCCCEEEEECCC
Confidence 99999999999999999999999999999999999999999999997 7999999999999999999999999999999
Q ss_pred cccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 798 INDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNI 862 (937)
Q Consensus 798 ~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Ni 862 (937)
+||+|||++||||||||+|+|+|+++||+||++|||+.|++++++||++|.|+++.+.|.++.|+
T Consensus 513 vNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~ 577 (673)
T PRK14010 513 TNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDI 577 (673)
T ss_pred hhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccH
Confidence 99999999999999999999999999999999999999999999999999999999999999887
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-90 Score=815.52 Aligned_cols=513 Identities=25% Similarity=0.342 Sum_probs=430.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCc-eEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEE
Q 002310 327 EEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPS-KARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVV 405 (937)
Q Consensus 327 ~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~-~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvl 405 (937)
...+.+++.++++.++|.+++.|+++.+++|+++.|+ +++++|++ +++++|++++|++||+|.|++||+||+||+|
T Consensus 67 ~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g---~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~v 143 (679)
T PRK01122 67 AITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREP---GAAEEVPATELRKGDIVLVEAGEIIPADGEV 143 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECC---CEEEEEEHHHcCCCCEEEEcCCCEEEEEEEE
Confidence 3445666677899999999999999999999999886 79998763 2488999999999999999999999999999
Q ss_pred eecceeeeeccccCCCcccccCCCCc---cccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHH
Q 002310 406 RAGRSTVDESSFTGEPLPVTKIPESE---VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSG 482 (937)
Q Consensus 406 l~G~~~VDeS~LTGEs~pv~K~~g~~---v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~ 482 (937)
++|.+.||||+|||||.|+.|.+|+. ||+||.|.+|.++++|+++|.+|.++||++++++++.+|+|+|...+.+..
T Consensus 144 ieG~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~ 223 (679)
T PRK01122 144 IEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLA 223 (679)
T ss_pred EEccEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHH
Confidence 99999999999999999999999998 999999999999999999999999999999999999999999988887766
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEE
Q 002310 483 HFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLL 562 (937)
Q Consensus 483 ~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gil 562 (937)
+++.+.+++++..+.++++. +.+ .++.++++++++ +|||+++ .++|+....++.+++|+|++
T Consensus 224 ~l~~i~l~~~~~~~~~~~~~-----------g~~--~~l~~~iallV~---aiP~alg--~l~~~i~i~g~~r~ak~gvL 285 (679)
T PRK01122 224 GLTIIFLLVVATLPPFAAYS-----------GGA--LSITVLVALLVC---LIPTTIG--GLLSAIGIAGMDRVLQANVI 285 (679)
T ss_pred hhhHHHHHHHHHHHHHHHHh-----------Cch--HHHHHHHHHHHH---cccchhh--hHHHHHHHHHHHHHhcCCee
Confidence 66544433332222221111 112 267788999999 9999999 99999999999999999999
Q ss_pred EcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHH
Q 002310 563 LRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEA 642 (937)
Q Consensus 563 vk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~ 642 (937)
+|+++++|++|++|++|||||||||+|+|+++++++. .+.++++++..++.++..+.||.++||+++
T Consensus 286 vk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~-------------~~~~~~~ll~~a~~~s~~s~hP~~~AIv~~ 352 (679)
T PRK01122 286 ATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPV-------------PGVTEEELADAAQLSSLADETPEGRSIVVL 352 (679)
T ss_pred ecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeC-------------CCCCHHHHHHHHHHhcCCCCCchHHHHHHH
Confidence 9999999999999999999999999999999998764 335567889999999999999999999999
Q ss_pred HHh-cCCccccc--cCCceEEe-cCCeeEE-EEcCeEEEeccHHHHHhcCCC----Cc-ch-hhHHHHHhCCCeEEEEEE
Q 002310 643 AEF-SNCQNVKV--ADGTFIEE-PGSGTVA-IIEDRKVSVGTIDWLRSHGVD----TS-TF-QEVEMEDLMNQSLVYVGV 711 (937)
Q Consensus 643 a~~-~~~~~~~~--~~~~~~~~-~g~g~~~-~i~~~~~~~G~~~~l~~~~~~----~~-~~-~~~~~~~~~~~~~~~v~~ 711 (937)
+++ .+...... ....+... ..++..+ .++++.+.||+++.+.+.|.. .. .. +..++.+.+|.++++++.
T Consensus 353 a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~g~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~ 432 (679)
T PRK01122 353 AKQRFNLRERDLQSLHATFVPFSAQTRMSGVDLDGREIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAE 432 (679)
T ss_pred HHhhcCCCchhhccccceeEeecCcCceEEEEECCEEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEE
Confidence 876 23321110 01112111 2233333 367888999999987665521 11 11 122344567889999999
Q ss_pred CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEE
Q 002310 712 DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVV 791 (937)
Q Consensus 712 ~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~V 791 (937)
|++++|+++++|++|||++++|++||++||+++|+||||+.||.+||+++||+ +++||++||||.++|+.+|++|+.|
T Consensus 433 ~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--~v~A~~~PedK~~iV~~lQ~~G~~V 510 (679)
T PRK01122 433 DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFLAEATPEDKLALIRQEQAEGRLV 510 (679)
T ss_pred CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--EEEccCCHHHHHHHHHHHHHcCCeE
Confidence 99999999999999999999999999999999999999999999999999997 8999999999999999999999999
Q ss_pred EEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-----HHH
Q 002310 792 AMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQN-LWWAFGYNI-----VGI 865 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~n-l~~a~~~Ni-----i~i 865 (937)
+|+|||+||+|||++||||||||+|+|+|+|+||+||++|||+.|++++++||++. ..|.. -.|++. |- ..+
T Consensus 511 aMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~-~tr~~~~~f~~~-n~~~~~~~i~ 588 (679)
T PRK01122 511 AMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLL-MTRGALTTFSIA-NDVAKYFAII 588 (679)
T ss_pred EEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHH-hhhHhhhhhhHH-HHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998 34444 455554 53 345
Q ss_pred HHHhhhhhcccc
Q 002310 866 PIAAGVLLPVTG 877 (937)
Q Consensus 866 ~la~~~~~~~~g 877 (937)
|..+...||-.+
T Consensus 589 p~~~~~~~~~~~ 600 (679)
T PRK01122 589 PAMFAATYPQLN 600 (679)
T ss_pred HHHHHhhCcccc
Confidence 555555666544
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-90 Score=848.75 Aligned_cols=559 Identities=20% Similarity=0.255 Sum_probs=461.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCC--CCeEEEEeCCCccCCcEEEEcCCCEEeeeEE
Q 002310 327 EEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDA--KDSIIEVPCNSLHVGDHIVVLPGDRIPADGV 404 (937)
Q Consensus 327 ~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~--~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgv 404 (937)
..+++++++++++.+++.++++|+++.+++|.++.|.+++|+|+++. +|++++|+++||+|||+|.|++||+|||||+
T Consensus 123 ~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~ 202 (902)
T PRK10517 123 FAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLR 202 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEE
Confidence 35678888999999999999999999999999999999999987321 1578999999999999999999999999999
Q ss_pred Eeecc-eeeeeccccCCCcccccCCCC-------------ccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccC
Q 002310 405 VRAGR-STVDESSFTGEPLPVTKIPES-------------EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSRE 470 (937)
Q Consensus 405 ll~G~-~~VDeS~LTGEs~pv~K~~g~-------------~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~ 470 (937)
|++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|++||.+|.+|+|.+++++++.++
T Consensus 203 li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~ 282 (902)
T PRK10517 203 ILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEP 282 (902)
T ss_pred EEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCCC
Confidence 99997 699999999999999999875 6999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHH
Q 002310 471 APVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSY 550 (937)
Q Consensus 471 ~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~ 550 (937)
+|+|+.+|+++.++..++++++.++++++.+.. .+|..++.+++++++. +|||+|+ +++++++.
T Consensus 283 t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~-----------~~~~~~l~~alsv~V~---~~Pe~LP--~~vt~~la 346 (902)
T PRK10517 283 NAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK-----------GDWWEAALFALSVAVG---LTPEMLP--MIVTSTLA 346 (902)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc-----------CCHHHHHHHHHHHHHH---HcccHHH--HHHHHHHH
Confidence 999999999999998888888777776654322 2467788899999999 9999998 99999999
Q ss_pred HHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhc---
Q 002310 551 VGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGV--- 627 (937)
Q Consensus 551 ~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~--- 627 (937)
.+..+++|+|+++|+++++|+||++|+||||||||||+|+|+|.++... .+.+.++++.+++..
T Consensus 347 ~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~-------------~~~~~~~ll~~a~l~~~~ 413 (902)
T PRK10517 347 RGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI-------------SGKTSERVLHSAWLNSHY 413 (902)
T ss_pred HHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC-------------CCCCHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999999999987532 122345677766542
Q ss_pred ccCCCCChHHHHHHHHHhcCCccccccCCceEEec----CCeeEEEEc---C--eEEEeccHHHHHhcCCCCc------c
Q 002310 628 ESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEP----GSGTVAIIE---D--RKVSVGTIDWLRSHGVDTS------T 692 (937)
Q Consensus 628 e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~----g~g~~~~i~---~--~~~~~G~~~~l~~~~~~~~------~ 692 (937)
+....||++.|++++++..+..........+.+.| .+++...++ + ..+.||+++.+.+.|.... +
T Consensus 414 ~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~ 493 (902)
T PRK10517 414 QTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVP 493 (902)
T ss_pred CCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeec
Confidence 23457999999999887543111111111222333 344444442 2 3488999999988875321 1
Q ss_pred h-----hh----HHHHHhCCCeEEEEEE----------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEc
Q 002310 693 F-----QE----VEMEDLMNQSLVYVGV----------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLS 747 (937)
Q Consensus 693 ~-----~~----~~~~~~~~~~~~~v~~----------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlT 747 (937)
. ++ .+....+|.+++++++ |++|+|+++|+||+|||++++|++|+++||+|+|+|
T Consensus 494 l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miT 573 (902)
T PRK10517 494 LDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILT 573 (902)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEc
Confidence 1 01 1234567888888874 568999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCc-----------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHH
Q 002310 748 GDKKNSAEYVASLVGIPKD-----------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAAL 804 (937)
Q Consensus 748 GD~~~tA~~iA~~~GI~~~-----------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL 804 (937)
|||+.||.+||+++||..+ .||||++|+||.++|+.||++|++|+|+|||+||+|||
T Consensus 574 GD~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPAL 653 (902)
T PRK10517 574 GDSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPAL 653 (902)
T ss_pred CCCHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHH
Confidence 9999999999999999621 79999999999999999999999999999999999999
Q ss_pred HhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHH
Q 002310 805 ASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSI 884 (937)
Q Consensus 805 ~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~ 884 (937)
++||||||||+|+|+|+++||+||++|||..|++++++||++++||+|++.|.++.|+..+...+...+. .+ ..|+.
T Consensus 654 k~ADVGIAmg~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~-~~--~~pl~ 730 (902)
T PRK10517 654 RAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAF-LP--FLPML 730 (902)
T ss_pred HhCCEEEEeCCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH-hh--hhhhH
Confidence 9999999999999999999999999999999999999999999999999999999998554433211110 11 13666
Q ss_pred HHHHhhhhHHHHHHHHhhhccccccccccccCCCCC
Q 002310 885 AGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSS 920 (937)
Q Consensus 885 a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~ 920 (937)
+..++...-+.- +.++-|. ..+..++.+++||+
T Consensus 731 ~~qiL~inl~~D-~~~~al~--~d~~~~~~m~~p~r 763 (902)
T PRK10517 731 PLHLLIQNLLYD-VSQVAIP--FDNVDDEQIQKPQR 763 (902)
T ss_pred HHHHHHHHHHHH-HhHHhhc--CCCCChhhhcCCCC
Confidence 666666665655 3355554 44455556788887
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-89 Score=848.16 Aligned_cols=558 Identities=20% Similarity=0.262 Sum_probs=458.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCC--CCCeEEEEeCCCccCCcEEEEcCCCEEeeeE
Q 002310 326 FEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDND--AKDSIIEVPCNSLHVGDHIVVLPGDRIPADG 403 (937)
Q Consensus 326 f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~--~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDg 403 (937)
|..+++++++++++.+++.++++|+++++++|.++.+.+++|+|+-. .+|++++|+++||+|||+|.|++||+|||||
T Consensus 88 ~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg 167 (867)
T TIGR01524 88 LEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADA 167 (867)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccE
Confidence 33566777888888889999999999999999999999999998210 0268999999999999999999999999999
Q ss_pred EEeecc-eeeeeccccCCCcccccCCCC-------------ccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhcc
Q 002310 404 VVRAGR-STVDESSFTGEPLPVTKIPES-------------EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSR 469 (937)
Q Consensus 404 vll~G~-~~VDeS~LTGEs~pv~K~~g~-------------~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~ 469 (937)
+|++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.+|||.+++++ +..
T Consensus 168 ~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~~ 246 (867)
T TIGR01524 168 RVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RRG 246 (867)
T ss_pred EEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CCC
Confidence 999997 599999999999999999875 59999999999999999999999999999999988 777
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHH
Q 002310 470 EAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYS 549 (937)
Q Consensus 470 ~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~ 549 (937)
++|+|+.+++++.++.+++++++.+++++|.+.. .+|..++.+++++++. +|||+|+ +++++++
T Consensus 247 ~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~-----------~~~~~~~~~al~l~v~---~iP~~Lp--~~vt~~l 310 (867)
T TIGR01524 247 QTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK-----------GDWLEAFLFALAVAVG---LTPEMLP--MIVSSNL 310 (867)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc-----------CCHHHHHHHHHHHHHH---hCcchHH--HHHHHHH
Confidence 8999999999999999988888887777664432 2456788899999999 9999998 9999999
Q ss_pred HHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHh---
Q 002310 550 YVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAG--- 626 (937)
Q Consensus 550 ~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~--- 626 (937)
..+..+++|+|+++|+++++|+||++|+||||||||||+|+|+|.+++.. .+.+.++++.+++.
T Consensus 311 a~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~-------------~~~~~~~~l~~a~l~~~ 377 (867)
T TIGR01524 311 AKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDS-------------SGETSERVLKMAWLNSY 377 (867)
T ss_pred HHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecC-------------CCCCHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999998642 12234567766653
Q ss_pred cccCCCCChHHHHHHHHHhcCCccccccCCceEEec----CCeeEEEEcC-----eEEEeccHHHHHhcCCCCc------
Q 002310 627 VESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEP----GSGTVAIIED-----RKVSVGTIDWLRSHGVDTS------ 691 (937)
Q Consensus 627 ~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~----g~g~~~~i~~-----~~~~~G~~~~l~~~~~~~~------ 691 (937)
.+..+.||+++|+++++..............+.+.| ++++.+.+++ ..+.||+++.+.+.|....
T Consensus 378 ~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~ 457 (867)
T TIGR01524 378 FQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVV 457 (867)
T ss_pred CCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCcee
Confidence 233467999999999887532111111112233334 4566665543 2489999999988775321
Q ss_pred ch-----h----hHHHHHhCCCeEEEEEE----------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEE
Q 002310 692 TF-----Q----EVEMEDLMNQSLVYVGV----------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYML 746 (937)
Q Consensus 692 ~~-----~----~~~~~~~~~~~~~~v~~----------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~ml 746 (937)
+. + ..+....+|.+++++++ |.+|+|+++|+||+|+|++++|++||++||+|+|+
T Consensus 458 ~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmi 537 (867)
T TIGR01524 458 TLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVL 537 (867)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEE
Confidence 00 1 11234567888888886 23799999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCc-----------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHH
Q 002310 747 SGDKKNSAEYVASLVGIPKD-----------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAA 803 (937)
Q Consensus 747 TGD~~~tA~~iA~~~GI~~~-----------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~A 803 (937)
|||++.||.+||+++||..+ .||||++|+||.++|+.||++|++|+|+|||+||+||
T Consensus 538 TGD~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapA 617 (867)
T TIGR01524 538 TGDNEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPA 617 (867)
T ss_pred cCCCHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHH
Confidence 99999999999999999621 7999999999999999999999999999999999999
Q ss_pred HHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhccccccchH
Q 002310 804 LASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAA-GVLLPVTGTMLTP 882 (937)
Q Consensus 804 L~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~-~~~~~~~g~~l~P 882 (937)
|++||||||||+|+|+|+++||+||++|+|+.|++++++||++++||+||+.|.++.|+..+...+ +.++ . ...|
T Consensus 618 Lk~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~---~-~~~p 693 (867)
T TIGR01524 618 LRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAF---I-PFLP 693 (867)
T ss_pred HHhCCEEEEeCCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH---h-hhhh
Confidence 999999999999999999999999999999999999999999999999999999988875443322 1111 1 1246
Q ss_pred HHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCC
Q 002310 883 SIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSS 920 (937)
Q Consensus 883 ~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~ 920 (937)
+.+..+....-+.- +.++.|. ..+...+.+++||+
T Consensus 694 l~~~qil~inl~~d-~~~~al~--~~~~~~~~m~~p~~ 728 (867)
T TIGR01524 694 MLSLHLLIQNLLYD-FSQLTLP--WDKMDREFLKKPHQ 728 (867)
T ss_pred HHHHHHHHHHHHHH-HHHHhhc--CCCCChHhhCCCCC
Confidence 66666666665666 4565554 44555555676665
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-89 Score=849.21 Aligned_cols=568 Identities=20% Similarity=0.255 Sum_probs=462.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCC--CCCeEEEEeCCCccCCcEEEEcCCCEEeeeE
Q 002310 326 FEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDND--AKDSIIEVPCNSLHVGDHIVVLPGDRIPADG 403 (937)
Q Consensus 326 f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~--~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDg 403 (937)
|..+++++++++++.+++.++++|+++++++|.++.|.+++|+|++. .+|++++|+++||+|||+|.|++||+|||||
T Consensus 111 ~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg 190 (903)
T PRK15122 111 LTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADV 190 (903)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeE
Confidence 34567788888999999999999999999999999999999998731 1257899999999999999999999999999
Q ss_pred EEeecc-eeeeeccccCCCcccccCC-----------------------CCccccceeeecceEEEEEEecCCccHHHHH
Q 002310 404 VVRAGR-STVDESSFTGEPLPVTKIP-----------------------ESEVAAGSINLNGTLTVEVRRPGGETAMGDI 459 (937)
Q Consensus 404 vll~G~-~~VDeS~LTGEs~pv~K~~-----------------------g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i 459 (937)
+|++|+ +.||||+|||||.|+.|.+ ++.+|+||.+.+|+++++|++||.+|.+|||
T Consensus 191 ~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI 270 (903)
T PRK15122 191 RLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSL 270 (903)
T ss_pred EEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHH
Confidence 999997 5899999999999999975 2679999999999999999999999999999
Q ss_pred HHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhccccccccc
Q 002310 460 VRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLS 539 (937)
Q Consensus 460 ~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal 539 (937)
.+++++ ...++|+|+.++++..++..+.+.++.+++++.++. +.++..++.+++++++. +|||+|
T Consensus 271 ~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~-----------~~~~~~~l~~aisl~V~---~~Pe~L 335 (903)
T PRK15122 271 AKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT-----------KGDWLEALLFALAVAVG---LTPEML 335 (903)
T ss_pred HHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-----------cCCHHHHHHHHHHHHHH---HccchH
Confidence 999987 566789999999998887776665555444432221 13567788899999999 999999
Q ss_pred chhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHH
Q 002310 540 MCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETE 619 (937)
Q Consensus 540 ~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 619 (937)
+ +++++++..+..+++++|+++|+.+++|+||++|+||||||||||+|+|+|.+++.. .+.++++
T Consensus 336 p--~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~-------------~~~~~~~ 400 (903)
T PRK15122 336 P--MIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDV-------------SGRKDER 400 (903)
T ss_pred H--HHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcC-------------CCCChHH
Confidence 9 999999999999999999999999999999999999999999999999999998753 1123355
Q ss_pred HHHHHHh---cccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeE---E-EE---cCe--EEEeccHHHHHhcC
Q 002310 620 ILKFAAG---VESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTV---A-II---EDR--KVSVGTIDWLRSHG 687 (937)
Q Consensus 620 ll~~aa~---~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~---~-~i---~~~--~~~~G~~~~l~~~~ 687 (937)
++.+++. .+..+.||+++|+++++...+..........+.+.|+.+.. . .+ +++ .+.||+++.+.+.|
T Consensus 401 ~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c 480 (903)
T PRK15122 401 VLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVA 480 (903)
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhc
Confidence 6666653 23456899999999999876543111112334455544322 1 12 333 36789999998887
Q ss_pred CCCc------chh---------hHHHHHhCCCeEEEEEE------------------CCEEEEEEEecCcCChhHHHHHH
Q 002310 688 VDTS------TFQ---------EVEMEDLMNQSLVYVGV------------------DNMLAGLIYVEDRIRDDAAHVVN 734 (937)
Q Consensus 688 ~~~~------~~~---------~~~~~~~~~~~~~~v~~------------------~~~~lG~i~l~D~lr~~a~e~I~ 734 (937)
.... +.+ ..+....+|.+++++++ |++|+|+++|+||+|||++++|+
T Consensus 481 ~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~ 560 (903)
T PRK15122 481 THVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIA 560 (903)
T ss_pred hhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHH
Confidence 5321 111 12234567888888874 45899999999999999999999
Q ss_pred HHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-----------------------ceeEeccChhhHHHHHHHHhcCCCEE
Q 002310 735 SLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-----------------------DKVLSGVKPNEKKRFINELQNDENVV 791 (937)
Q Consensus 735 ~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~-----------------------~~v~ar~~Pe~K~~iV~~Lq~~G~~V 791 (937)
+||++||+|+|+||||+.||.+||+++||.. ..||||++|+||.++|+.||++|++|
T Consensus 561 ~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vV 640 (903)
T PRK15122 561 ALRENGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTV 640 (903)
T ss_pred HHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEE
Confidence 9999999999999999999999999999962 16999999999999999999999999
Q ss_pred EEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h
Q 002310 792 AMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAA-G 870 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~-~ 870 (937)
+|+|||+||+|||++||||||||+|+|+|+++||+||++|||+.|++++++||++++||+|++.|.++.|+..+...+ +
T Consensus 641 amtGDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~ 720 (903)
T PRK15122 641 GFLGDGINDAPALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVA 720 (903)
T ss_pred EEECCCchhHHHHHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999975543322 1
Q ss_pred hhhccccccchHHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCCcccccccccc
Q 002310 871 VLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQL 931 (937)
Q Consensus 871 ~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (937)
.++ + ...|+.+..+.+..-+.-. .++-|. ..+...+.+ +||++.+..++++.+
T Consensus 721 ~~~---~-~~~pl~~~qil~~nli~D~-~~lal~--~d~~~~~~m-~~P~~~~~~~~~~~~ 773 (903)
T PRK15122 721 SAF---I-PFLPMLAIHLLLQNLMYDI-SQLSLP--WDKMDKEFL-RKPRKWDAKNIGRFM 773 (903)
T ss_pred HHH---h-ccchhHHHHHHHHHHHHHH-HHHhhc--CCCCCHhhc-CCCCCCChhhhHHHH
Confidence 111 1 1246666666665555553 455554 444555557 888888888877654
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-88 Score=843.84 Aligned_cols=586 Identities=18% Similarity=0.186 Sum_probs=461.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcC-CCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEee
Q 002310 329 PIMLIAFVLLGKNLEQRAKIKATSDMTGLLGI-LPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA 407 (937)
Q Consensus 329 ~~~il~~~llg~~le~~~~~k~~~~l~~l~~~-~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~ 407 (937)
++++++.+++...+...+..++++.+++|.+. .+.+++|+|+ |++++|+++||+|||+|.|++||+|||||+|++
T Consensus 131 ~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRd----G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~ 206 (941)
T TIGR01517 131 GVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRG----GQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS 206 (941)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEEC----CEEEEEeHHHCCCCCEEEECCCCEecccEEEEE
Confidence 34444444444444455555566666666653 4778999987 589999999999999999999999999999999
Q ss_pred c-ceeeeeccccCCCcccccCCCCc--cccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHH
Q 002310 408 G-RSTVDESSFTGEPLPVTKIPESE--VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHF 484 (937)
Q Consensus 408 G-~~~VDeS~LTGEs~pv~K~~g~~--v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~ 484 (937)
| ++.||||+|||||.|+.|.+++. +|+||.+.+|.++++|++||.+|.+|||.+++++++ +++|+|+.+++++.++
T Consensus 207 g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~ 285 (941)
T TIGR01517 207 GLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLI 285 (941)
T ss_pred cCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHH
Confidence 9 79999999999999999998877 999999999999999999999999999999998765 5679999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhc-c-cccc---hhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcC
Q 002310 485 TYGVIALSAATFVFWNLFGA-H-VLPT---AIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATR 559 (937)
Q Consensus 485 ~~~vl~la~~~~i~~~~~~~-~-~~~~---~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~ 559 (937)
.++++++++++|++|++... . .... .-..+.++...+.++++++++ +|||+|+ +++|+++..++.+++++
T Consensus 286 ~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~---~iP~~Lp--~~vti~l~~~~~~mak~ 360 (941)
T TIGR01517 286 GKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVV---AVPEGLP--LAVTIALAYSMKKMMKD 360 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHh---hCCCchH--HHHHHHHHHHHHHHHhC
Confidence 99988888888877643210 0 0000 000123567788899999999 9999999 99999999999999999
Q ss_pred cEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhccc----------
Q 002310 560 GLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVES---------- 629 (937)
Q Consensus 560 gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~---------- 629 (937)
|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..++.+........ ...+++..++.+..
T Consensus 361 ~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~s~~~~~~~~~~ 439 (941)
T TIGR01517 361 NNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPK-HVRNILVEGISLNSSSEEVVDRGG 439 (941)
T ss_pred CCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCH-HHHHHHHHHHHhCCCCccccCCCC
Confidence 9999999999999999999999999999999999999875433322111000000 11223322222211
Q ss_pred ---CCCCChHHHHHHHHHhcCCcccc-------ccCCceEE-ecCCeeEEEEcCe---EEEeccHHHHHhcCCCC-----
Q 002310 630 ---NTVHPIGKAIVEAAEFSNCQNVK-------VADGTFIE-EPGSGTVAIIEDR---KVSVGTIDWLRSHGVDT----- 690 (937)
Q Consensus 630 ---~s~hP~~~Ai~~~a~~~~~~~~~-------~~~~~~~~-~~g~g~~~~i~~~---~~~~G~~~~l~~~~~~~----- 690 (937)
...+|++.|++++++..+.+... .....|.. ..+.++....++. .+.||+++.+...|...
T Consensus 440 ~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g 519 (941)
T TIGR01517 440 KRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNG 519 (941)
T ss_pred ccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCC
Confidence 12568899999998866543211 11112222 1233444444332 48899999998877431
Q ss_pred --cch--------hhHHHHHhCCCeEEEEEE----------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEE
Q 002310 691 --STF--------QEVEMEDLMNQSLVYVGV----------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVY 744 (937)
Q Consensus 691 --~~~--------~~~~~~~~~~~~~~~v~~----------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~ 744 (937)
.+. +..+++..+|.+++.+++ |++|+|+++++||+|+|++++|+.||++||+|+
T Consensus 520 ~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~ 599 (941)
T TIGR01517 520 EATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVR 599 (941)
T ss_pred CcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEE
Confidence 000 112345567888887764 448999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCCCCc-------------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcc
Q 002310 745 MLSGDKKNSAEYVASLVGIPKD-------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGIN 799 (937)
Q Consensus 745 mlTGD~~~tA~~iA~~~GI~~~-------------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~N 799 (937)
|+|||++.||.+||+++||.+. .||||++|+||.++|+.||++|++|+|||||+|
T Consensus 600 miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 600 MVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred EECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 9999999999999999999631 699999999999999999999999999999999
Q ss_pred cHHHHHhCCeeEEeC-CChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccc
Q 002310 800 DAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGT 878 (937)
Q Consensus 800 Da~AL~~AdVGIamg-~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~ 878 (937)
|+|||++|||||||| +|+|+|+++||++|++|+|+.|++++++||+++++|+||+.|+++||+..+++++.+.+ ++
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~--~~- 756 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSC--IS- 756 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hh-
Confidence 999999999999999 99999999999999999999999999999999999999999999999998888764332 22
Q ss_pred cchHHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCCccccccccc
Q 002310 879 MLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQ 930 (937)
Q Consensus 879 ~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (937)
.-.|+-+..+..++-+...+.++.|... ++..+.+++||.+.+....+..
T Consensus 757 ~~~pl~~~qil~inl~~d~~~al~l~~e--~~~~~lm~~~P~~~~~~li~~~ 806 (941)
T TIGR01517 757 STSPLTAVQLLWVNLIMDTLAALALATE--PPTEALLDRKPIGRNAPLISRS 806 (941)
T ss_pred ccccHHHHHHHHHHHHHHHhhHHHHccC--CccHHHHhCCCCCCCCCcCCHH
Confidence 1347777777777778888888887644 4445568889988777776654
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-86 Score=782.47 Aligned_cols=516 Identities=27% Similarity=0.373 Sum_probs=432.1
Q ss_pred hhhhHH--HHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCce-EEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEee
Q 002310 325 FFEEPI--MLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSK-ARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPA 401 (937)
Q Consensus 325 ~f~~~~--~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~-~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPa 401 (937)
||+..+ .+++.++++.++|.++++|+++.+++|.+..|++ ++++|++ |++++|++++|+|||+|.|++||+||+
T Consensus 64 ~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~d---g~~~~V~~~~L~~GDiV~V~~Gd~IPa 140 (675)
T TIGR01497 64 LFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDD---GAIDKVPADQLKKGDIVLVEAGDVIPC 140 (675)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeC---CEEEEEEHHHCCCCCEEEECCCCEEee
Confidence 454433 3344478999999999999999999999998874 8787643 588999999999999999999999999
Q ss_pred eEEEeecceeeeeccccCCCcccccCCCCc---cccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHH
Q 002310 402 DGVVRAGRSTVDESSFTGEPLPVTKIPESE---VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLAD 478 (937)
Q Consensus 402 Dgvll~G~~~VDeS~LTGEs~pv~K~~g~~---v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d 478 (937)
||+|++|++.||||+|||||.|+.|.+|+. ||+||.+.+|.++++|+++|.+|+++||++++++++.+|+|+|...+
T Consensus 141 DG~vieG~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~ 220 (675)
T TIGR01497 141 DGEVIEGVASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALT 220 (675)
T ss_pred eEEEEEccEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHH
Confidence 999999999999999999999999999985 99999999999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhc
Q 002310 479 QVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGAT 558 (937)
Q Consensus 479 ~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~ 558 (937)
.+..++..+.+ ++. +.+|.+.. +.+. ..++.++++++++ +|||+++ ...|.....++.+++|
T Consensus 221 ~l~~~l~~v~l-i~~--~~~~~~~~--------~~~~--~~~~~~lvallV~---aiP~aLg--~l~~av~iag~~r~ar 282 (675)
T TIGR01497 221 ILLIALTLVFL-LVT--ATLWPFAA--------YGGN--AISVTVLVALLVC---LIPTTIG--GLLSAIGIAGMDRVLG 282 (675)
T ss_pred HHHHHHHHHHH-HHH--HHHHHHHH--------hcCh--hHHHHHHHHHHHH---hCchhhh--hHHHHHHHHHHHHHHH
Confidence 76655433322 222 22232211 0111 2356677889999 9999998 7888888889999999
Q ss_pred CcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHH
Q 002310 559 RGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKA 638 (937)
Q Consensus 559 ~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~A 638 (937)
+|+++|+++++|++|++|++|||||||||+|+|++.++++. .+.++++++.+++.++..++||+++|
T Consensus 283 ~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~-------------~~~~~~~ll~~aa~~~~~s~hP~a~A 349 (675)
T TIGR01497 283 FNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPA-------------QGVDEKTLADAAQLASLADDTPEGKS 349 (675)
T ss_pred CCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEec-------------CCCcHHHHHHHHHHhcCCCCCcHHHH
Confidence 99999999999999999999999999999999999999864 33466789999999999999999999
Q ss_pred HHHHHHhcCCccccc--cCCceEEecCC-eeEEE--EcCeEEEeccHHHHHhcCC----CCc-c-hhhHHHHHhCCCeEE
Q 002310 639 IVEAAEFSNCQNVKV--ADGTFIEEPGS-GTVAI--IEDRKVSVGTIDWLRSHGV----DTS-T-FQEVEMEDLMNQSLV 707 (937)
Q Consensus 639 i~~~a~~~~~~~~~~--~~~~~~~~~g~-g~~~~--i~~~~~~~G~~~~l~~~~~----~~~-~-~~~~~~~~~~~~~~~ 707 (937)
|++++++.+.+.... ...++...++. ++.+. .+++.+.+|+++++.+.+. ... . .+..++...++.+++
T Consensus 350 iv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~g~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l 429 (675)
T TIGR01497 350 IVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPL 429 (675)
T ss_pred HHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEeCCeEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEE
Confidence 999998766543211 11234444444 45543 3678899999988765432 111 1 122334567788999
Q ss_pred EEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcC
Q 002310 708 YVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND 787 (937)
Q Consensus 708 ~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~ 787 (937)
+++.|++++|+++++|++|||++++|++||++||+++|+|||+..||.++|+++||+ ++++|++|+||.++|+.+|++
T Consensus 430 ~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~--~v~a~~~PedK~~~v~~lq~~ 507 (675)
T TIGR01497 430 VVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD--DFIAEATPEDKIALIRQEQAE 507 (675)
T ss_pred EEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--EEEcCCCHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999997 899999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H
Q 002310 788 ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNI----V 863 (937)
Q Consensus 788 G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Ni----i 863 (937)
|+.|+|+|||+||+|||++|||||||++|+++|+++||++|++|||++|++++++||+++-+...-..|++.-++ .
T Consensus 508 g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~ 587 (675)
T TIGR01497 508 GKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFA 587 (675)
T ss_pred CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999888877788876443 3
Q ss_pred HHHHHhhhhhccc
Q 002310 864 GIPIAAGVLLPVT 876 (937)
Q Consensus 864 ~i~la~~~~~~~~ 876 (937)
.+|..+...||..
T Consensus 588 ~~~~~~~~~~~~~ 600 (675)
T TIGR01497 588 IIPAIFAAAYPQL 600 (675)
T ss_pred HHHHHHHhhCcch
Confidence 4454444455543
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-86 Score=823.90 Aligned_cols=577 Identities=21% Similarity=0.279 Sum_probs=464.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecc
Q 002310 330 IMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR 409 (937)
Q Consensus 330 ~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~ 409 (937)
+.+++++++...+..++++|+++.+++|.++.|.+++|+|+ |++++|+++||+|||+|.|++||+|||||+|++|+
T Consensus 84 ~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRd----g~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~ 159 (884)
T TIGR01522 84 VSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIRE----GKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAV 159 (884)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC----CEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcC
Confidence 33333444444555556667788899999999999999987 58999999999999999999999999999999995
Q ss_pred -eeeeeccccCCCcccccCCCC--------------ccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHH
Q 002310 410 -STVDESSFTGEPLPVTKIPES--------------EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQ 474 (937)
Q Consensus 410 -~~VDeS~LTGEs~pv~K~~g~--------------~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~ 474 (937)
+.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|++||.+|.+|+|.+++++++..++|+|
T Consensus 160 ~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq 239 (884)
T TIGR01522 160 DLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQ 239 (884)
T ss_pred ceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcHH
Confidence 899999999999999999874 79999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHH
Q 002310 475 RLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTS 554 (937)
Q Consensus 475 ~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~ 554 (937)
+.+++++.+++++++++++++++++++. +.++..++.++++++++ +|||+|+ +++|+++..+..
T Consensus 240 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~v~llv~---aiP~~Lp--~~vt~~l~~~~~ 303 (884)
T TIGR01522 240 KSMDLLGKQLSLVSFGVIGVICLVGWFQ-----------GKDWLEMFTISVSLAVA---AIPEGLP--IIVTVTLALGVL 303 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------cCCHHHHHHHHHHHHHH---HccchHH--HHHHHHHHHHHH
Confidence 9999999999887766555555443322 23467788899999999 9999999 999999999999
Q ss_pred hhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCC-C-----CCC------CCC-CCCC--HHH
Q 002310 555 LGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDP-N-----SKQ------NPI-HPLS--ETE 619 (937)
Q Consensus 555 ~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~-~-----~~~------~~~-~~~~--~~~ 619 (937)
+++++|+++|+.+++|+||++|+||||||||||+|+|+|.+++..+..+.. + ... ... ...+ ..+
T Consensus 304 r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (884)
T TIGR01522 304 RMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSR 383 (884)
T ss_pred HHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHH
Confidence 999999999999999999999999999999999999999999875432110 0 000 000 0011 134
Q ss_pred HHHHHHhcccC---------CCCChHHHHHHHHHhcCCccccccCCceEEecCC------eeEEEE--cC--eEEEeccH
Q 002310 620 ILKFAAGVESN---------TVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGS------GTVAII--ED--RKVSVGTI 680 (937)
Q Consensus 620 ll~~aa~~e~~---------s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~------g~~~~i--~~--~~~~~G~~ 680 (937)
++..++.+... ..||+++|++++++..+.+........+.+.|.. ++.... ++ ..+.||++
T Consensus 384 ~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGap 463 (884)
T TIGR01522 384 ILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAY 463 (884)
T ss_pred HHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCCh
Confidence 44444332211 1359999999999876654211111233444432 222222 23 24789999
Q ss_pred HHHHhcCCCCc-------ch---------hhHHHHHhCCCeEEEEEECC-----EEEEEEEecCcCChhHHHHHHHHHhC
Q 002310 681 DWLRSHGVDTS-------TF---------QEVEMEDLMNQSLVYVGVDN-----MLAGLIYVEDRIRDDAAHVVNSLSSQ 739 (937)
Q Consensus 681 ~~l~~~~~~~~-------~~---------~~~~~~~~~~~~~~~v~~~~-----~~lG~i~l~D~lr~~a~e~I~~L~~a 739 (937)
+.+...|.... +. +..++...+|.++++++++. +|+|+++++||+|||++++|+.|+++
T Consensus 464 e~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~ 543 (884)
T TIGR01522 464 EQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITG 543 (884)
T ss_pred HHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHC
Confidence 99988775321 01 11123456788999998754 89999999999999999999999999
Q ss_pred CCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------------eeEeccChhhHHHHHHHHhcCCCEEEEE
Q 002310 740 GIGVYMLSGDKKNSAEYVASLVGIPKD-------------------------KVLSGVKPNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 740 GI~v~mlTGD~~~tA~~iA~~~GI~~~-------------------------~v~ar~~Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
||+++|+|||++.||.++|+++||.+. .||||++|+||.++|+.||+.|++|+||
T Consensus 544 Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mv 623 (884)
T TIGR01522 544 GVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMT 623 (884)
T ss_pred CCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEE
Confidence 999999999999999999999999631 5999999999999999999999999999
Q ss_pred cCCcccHHHHHhCCeeEEeC-CChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 002310 795 GDGINDAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLL 873 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIamg-~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~ 873 (937)
|||+||+|||++|||||+|| +|+|+++++||++|++|+|+.|++++++||++++|||||+.|+++.|+..+.+.+..
T Consensus 624 GDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~-- 701 (884)
T TIGR01522 624 GDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALA-- 701 (884)
T ss_pred CCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH--
Confidence 99999999999999999999 799999999999999999999999999999999999999999999999877654322
Q ss_pred ccccccchHHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCCcccccccccc
Q 002310 874 PVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQL 931 (937)
Q Consensus 874 ~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (937)
.+++ ...|+.+..+..++-+...+.++.|.+ .++..+.+++||.+.+..+.++.|
T Consensus 702 ~~~~-~~~pl~~~qiL~inl~~d~~~a~~l~~--e~~~~~~m~~~P~~~~~~~~~~~~ 756 (884)
T TIGR01522 702 TLMG-FPNPLNAMQILWINILMDGPPAQSLGV--EPVDKDVMRKPPRPRNDKILTKDL 756 (884)
T ss_pred HHHc-CCCchhHHHHHHHHHHHHhhHHHHhcc--CCCChhHhhCCCCCCCCCccCHHH
Confidence 1233 235777777777888888888877765 444555689999988888877654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-87 Score=761.60 Aligned_cols=588 Identities=22% Similarity=0.301 Sum_probs=465.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEE
Q 002310 326 FEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVV 405 (937)
Q Consensus 326 f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvl 405 (937)
|+++..|.+.+.+...+..++++++++++++|+++.|+.++|+|+ |+.+.++++||||||||.++-||+||||.+|
T Consensus 78 ~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~----gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl 153 (972)
T KOG0202|consen 78 FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRS----GKLQHILARELVPGDIVELKVGDKIPADLRL 153 (972)
T ss_pred cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEec----CcccceehhccCCCCEEEEecCCccccceeE
Confidence 556666666666666666777778889999999999999999998 5899999999999999999999999999999
Q ss_pred eecc-eeeeeccccCCCcccccCCC--------------CccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccC
Q 002310 406 RAGR-STVDESSFTGEPLPVTKIPE--------------SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSRE 470 (937)
Q Consensus 406 l~G~-~~VDeS~LTGEs~pv~K~~g--------------~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~ 470 (937)
++-. ..||||.|||||.|+.|... +.+|+||.+..|.++++|+.||.+|.+|+|.+.+++.++.|
T Consensus 154 ~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~k 233 (972)
T KOG0202|consen 154 IEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPK 233 (972)
T ss_pred EeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCC
Confidence 9764 68999999999999999542 34899999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcccccchhccC---CcHHHHHHHHHHHHhhcccccccccchhhHHH
Q 002310 471 APVQRLADQVSGHFTYGVIALSAATFVFW-NLFGAHVLPTAIQYG---GPVSLALQLSCSVLRKETSICCCLSMCPWLSH 546 (937)
Q Consensus 471 ~~l~~~~d~~~~~~~~~vl~la~~~~i~~-~~~~~~~~~~~~~~~---~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p 546 (937)
+|+|+..|++...+..++.++++.+++.- .++. .|. ..| ..+...|..++++-+. ++|.+|+ ..+.
T Consensus 234 TPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~---~p~--~~g~~fk~~~~~f~IaVsLAVA---AIPEGLP--aVvT 303 (972)
T KOG0202|consen 234 TPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFL---DPV--HGGSWFKGALYYFKIAVSLAVA---AIPEGLP--AVVT 303 (972)
T ss_pred CcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhc---ccc--ccccchhchhhhhhHHHHHHHH---hccCCCc--chhh
Confidence 99999999999998876666666555441 1111 010 111 2445667788888888 9999999 9999
Q ss_pred HHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCC-------------C---CCC
Q 002310 547 AYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPN-------------S---KQN 610 (937)
Q Consensus 547 ~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~-------------~---~~~ 610 (937)
+.++.+..+|+|++++||...++|+||.+++||+|||||||+|+|.+.+++..+..+... . +++
T Consensus 304 ~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~ 383 (972)
T KOG0202|consen 304 TTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDG 383 (972)
T ss_pred hhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecC
Confidence 999999999999999999999999999999999999999999999999999865433221 0 000
Q ss_pred ---CCCCCCHH---HHHHHHHhc-----ccC-------CCCChHHHHHHHHHhcCCccccccCC----------------
Q 002310 611 ---PIHPLSET---EILKFAAGV-----ESN-------TVHPIGKAIVEAAEFSNCQNVKVADG---------------- 656 (937)
Q Consensus 611 ---~~~~~~~~---~ll~~aa~~-----e~~-------s~hP~~~Ai~~~a~~~~~~~~~~~~~---------------- 656 (937)
.......+ +++..++.+ +++ ...|.+.|+...+++.++........
T Consensus 384 ~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~ 463 (972)
T KOG0202|consen 384 LYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLF 463 (972)
T ss_pred ccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhh
Confidence 00111222 233333222 222 34799999999998877654221011
Q ss_pred -ceEEec---C-CeeEEEE----c---CeEEEeccHHHHHhcCCCCc--------chh---------hHHHHHhCCCeEE
Q 002310 657 -TFIEEP---G-SGTVAII----E---DRKVSVGTIDWLRSHGVDTS--------TFQ---------EVEMEDLMNQSLV 707 (937)
Q Consensus 657 -~~~~~~---g-~g~~~~i----~---~~~~~~G~~~~l~~~~~~~~--------~~~---------~~~~~~~~~~~~~ 707 (937)
...+.| . +.+...+ . ...+.||++|.+.++|.... +.. ...+...++.+++
T Consensus 464 ~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvL 543 (972)
T KOG0202|consen 464 KKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVL 543 (972)
T ss_pred hheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEE
Confidence 001111 1 1122222 1 24589999999999884211 111 1122344566666
Q ss_pred EEEE------------------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 708 YVGV------------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 708 ~v~~------------------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
.++. |++|+|++++.||+|++++++|+.|+++||+|+|+|||+++||++||+++||
T Consensus 544 alA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi 623 (972)
T KOG0202|consen 544 ALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGI 623 (972)
T ss_pred EEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 6553 6789999999999999999999999999999999999999999999999999
Q ss_pred CCc-----------------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeC
Q 002310 764 PKD-----------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG 814 (937)
Q Consensus 764 ~~~-----------------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg 814 (937)
..+ .+|+|++|++|.+||+.||++|.+|||+|||+||+||||.||||||||
T Consensus 624 ~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG 703 (972)
T KOG0202|consen 624 FSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMG 703 (972)
T ss_pred CcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeec
Confidence 421 699999999999999999999999999999999999999999999999
Q ss_pred -CChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhH
Q 002310 815 -GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSS 893 (937)
Q Consensus 815 -~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ss 893 (937)
+|||+||++||+||.||||+.|+.++++||.+|+|||+++.|.++.|+..+.+-+ +...+|+ -.|+.+..+.+..-
T Consensus 704 ~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~--l~aa~~~-p~pL~pvQiLWiNl 780 (972)
T KOG0202|consen 704 ISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIF--LTAAFGI-PEPLIPVQILWINL 780 (972)
T ss_pred CCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHH--HHHHhCC-CCcccchhhheeee
Confidence 9999999999999999999999999999999999999999999999985443221 1112342 26777777888776
Q ss_pred HHHHHHHhhhccccccccccccCCCCCCccccccccccc
Q 002310 894 IGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQLM 932 (937)
Q Consensus 894 l~v~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (937)
+.--..|..| .+.+..+|.+++||++.+.+++++.|+
T Consensus 781 vtDG~PA~aL--G~ep~D~DiM~kpPR~~~~~iit~~l~ 817 (972)
T KOG0202|consen 781 VTDGPPATAL--GFEPVDPDIMKKPPRDSKDGIITGWLI 817 (972)
T ss_pred eccCCchhhc--CCCCCChhHHhCCCCCCCCCeeeHHHH
Confidence 6666666655 456778889999999999999999875
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-86 Score=748.04 Aligned_cols=555 Identities=21% Similarity=0.230 Sum_probs=453.3
Q ss_pred CceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeec-ceeeeeccccCCCcccccCC--CCccccceee
Q 002310 362 PSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAG-RSTVDESSFTGEPLPVTKIP--ESEVAAGSIN 438 (937)
Q Consensus 362 p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G-~~~VDeS~LTGEs~pv~K~~--g~~v~aGt~~ 438 (937)
..+..|+|+ |+.++|++.||+||||+.|+.||+|||||++++| ++.||||++||||++++|.. +.++++||.+
T Consensus 219 ~~k~~ViR~----G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv 294 (1034)
T KOG0204|consen 219 NIKFQVIRG----GRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKV 294 (1034)
T ss_pred ceEEEEEEC----CEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeeccee
Confidence 457788887 6999999999999999999999999999999999 47999999999999999976 6789999999
Q ss_pred ecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cc------ccc
Q 002310 439 LNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGA---HV------LPT 509 (937)
Q Consensus 439 ~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~---~~------~~~ 509 (937)
.+|++++.|+.+|.+|..|+++..+.+....++|+|-.+++++..+..+.+.+|++++++...... .. +..
T Consensus 295 ~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~ 374 (1034)
T KOG0204|consen 295 MEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTW 374 (1034)
T ss_pred ecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccc
Confidence 999999999999999999999999999888999999999999999999999888888876543321 10 000
Q ss_pred hhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCC
Q 002310 510 AIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIG 589 (937)
Q Consensus 510 ~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~ 589 (937)
.-.....+...|..++.++++ |+|.+|+ ||+.++++.++.+|.+.+.++|..+++|+||..++||+|||||||.|
T Consensus 375 ~~~~~~~~v~~f~i~VTilVV---AVPEGLP--LAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N 449 (1034)
T KOG0204|consen 375 SDEYIQEFVKFFIIAVTILVV---AVPEGLP--LAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTN 449 (1034)
T ss_pred cHHHHHHHHHHhhheeEEEEE---ECCCCcc--HHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEee
Confidence 000122356667778888999 9999999 99999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEecCCcCCCCCCCCCCCCCCHH--HHHHHHHhc---------------ccCCCCChHHHHHHHHHhcCCcccc
Q 002310 590 RPVVTKVVTSGSLTDPNSKQNPIHPLSET--EILKFAAGV---------------ESNTVHPIGKAIVEAAEFSNCQNVK 652 (937)
Q Consensus 590 ~~~v~~i~~~~~~~~~~~~~~~~~~~~~~--~ll~~aa~~---------------e~~s~hP~~~Ai~~~a~~~~~~~~~ 652 (937)
+|.|++.+..++.++.+.... ...++. +++-..-+. .....+|.++||+.+....|.+...
T Consensus 450 ~MtVV~~~~~~~~~k~~~~~~--~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~ 527 (1034)
T KOG0204|consen 450 RMTVVQSYIGSEHYKVNSPKS--SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD 527 (1034)
T ss_pred eEEEEeeeeccccccccCccc--ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh
Confidence 999999999887777554431 223332 222111111 2234689999999999887776433
Q ss_pred ccCC-c------eEEec-CCeeEEEE-cCe--EEEeccHHHHHhcCCCCc-------chhh---------HHHHHhCCCe
Q 002310 653 VADG-T------FIEEP-GSGTVAII-EDR--KVSVGTIDWLRSHGVDTS-------TFQE---------VEMEDLMNQS 705 (937)
Q Consensus 653 ~~~~-~------~~~~~-g~g~~~~i-~~~--~~~~G~~~~l~~~~~~~~-------~~~~---------~~~~~~~~~~ 705 (937)
.+.+ . |.... ..|+.... ++. .+.||+.|.+...|..+. ++.+ .+..+.++.+
T Consensus 528 ~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LR 607 (1034)
T KOG0204|consen 528 VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLR 607 (1034)
T ss_pred hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhh
Confidence 3221 1 11111 22444333 222 589999999999886432 1111 2234455666
Q ss_pred EEEEEE---------------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002310 706 LVYVGV---------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 706 ~~~v~~---------------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~ 764 (937)
.+.+++ +.+++|+++++||+|||++++|+.|+++||+|.|+||||..||++||.+|||.
T Consensus 608 ti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGIL 687 (1034)
T KOG0204|consen 608 TICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGIL 687 (1034)
T ss_pred eeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccc
Confidence 666654 34799999999999999999999999999999999999999999999999993
Q ss_pred C---------------------------ceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeC-CC
Q 002310 765 K---------------------------DKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GG 816 (937)
Q Consensus 765 ~---------------------------~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg-~g 816 (937)
. -+|+||.+|.||+.+|+.|+++|++||.+|||+||+|||++||||.||| .|
T Consensus 688 t~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaG 767 (1034)
T KOG0204|consen 688 TPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAG 767 (1034)
T ss_pred cCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccc
Confidence 2 1799999999999999999999999999999999999999999999999 99
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHH
Q 002310 817 VGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGV 896 (937)
Q Consensus 817 t~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v 896 (937)
|++|||+|||||+||||++|+++++|||+.|.+|+|+++|+++.|++++.+++-.- ...| =+|+-|..+.+..-|+-
T Consensus 768 TeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A-~~~~--dsPLtAVQlLWVNLIMD 844 (1034)
T KOG0204|consen 768 TEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSA-CATG--DSPLTAVQLLWVNLIMD 844 (1034)
T ss_pred hhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhh-hhcC--CccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998887775322 1234 37999999999999999
Q ss_pred HHHHhhhccccccccccccCCCCCCccccccccccc
Q 002310 897 MANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQLM 932 (937)
Q Consensus 897 ~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (937)
.+-||.|+.+.|.+. .++++|--.+...+|..|+
T Consensus 845 TLgALALATepPt~~--Lm~RkP~GR~~~LIt~tMw 878 (1034)
T KOG0204|consen 845 TLGALALATEPPTDE--LMKRKPVGRTKPLITRTMW 878 (1034)
T ss_pred HHHHHHhccCCCChH--HhcCCCCCCCCcchHHHHH
Confidence 999999876644444 5777777666666666554
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-85 Score=807.33 Aligned_cols=573 Identities=24% Similarity=0.307 Sum_probs=455.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecce-e
Q 002310 333 IAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRS-T 411 (937)
Q Consensus 333 l~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~-~ 411 (937)
++++.+...+..++..|+.+.+++|++..+.+++|+|+ |++++|+++||+|||+|.+++||+||||++|++++. .
T Consensus 110 ~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~----g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~ 185 (917)
T COG0474 110 LLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRD----GKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLE 185 (917)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeC----CcEEEecHHHCCCCcEEEECCCCccccceEEEEecCce
Confidence 33344444444555566777888888888999999996 699999999999999999999999999999999987 9
Q ss_pred eeeccccCCCcccccCC--------------CCccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHH
Q 002310 412 VDESSFTGEPLPVTKIP--------------ESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLA 477 (937)
Q Consensus 412 VDeS~LTGEs~pv~K~~--------------g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~ 477 (937)
||||+|||||.|+.|.+ .+.+|+||.+.+|.+.+.|++||.+|.+|++.+++......++|+|+.+
T Consensus 186 VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l 265 (917)
T COG0474 186 VDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKL 265 (917)
T ss_pred EEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHHH
Confidence 99999999999999963 4678999999999999999999999999999999998878899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhh
Q 002310 478 DQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGA 557 (937)
Q Consensus 478 d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a 557 (937)
+++..++..+.+++++++++..++.+. .+|...+.+++++.+. ++|.+|+ ..+.++++.+..+++
T Consensus 266 ~~~~~~l~~~~l~~~~~~~~~~~~~~~----------~~~~~~~~~~v~l~va---~IPegLp--~~vti~la~g~~~ma 330 (917)
T COG0474 266 NKLGKFLLVLALVLGALVFVVGLFRGG----------NGLLESFLTALALAVA---AVPEGLP--AVVTIALALGAQRMA 330 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC----------ccHHHHHHHHHHHHHh---ccccchH--HHHHHHHHHHHHHHH
Confidence 999999999888888888877644322 2267889999999999 9999999 999999999999999
Q ss_pred cCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCH--HHHHHHHHhc---ccC--
Q 002310 558 TRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSE--TEILKFAAGV---ESN-- 630 (937)
Q Consensus 558 ~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~--~~ll~~aa~~---e~~-- 630 (937)
++++++|+++++|+||++++||+|||||||+|+|+|.+++..+...+.. ......+. .+++..++.+ ...
T Consensus 331 k~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~lc~~~~~~~~ 407 (917)
T COG0474 331 KDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID---DKDLKDSPALLRFLLAAALCNSVTPEKN 407 (917)
T ss_pred hccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc---ccccccchHHHHHHHHHHhcCccccccc
Confidence 9999999999999999999999999999999999999999884100000 00001111 1122211111 122
Q ss_pred ----CCCChHHHHHHHHHhcCC--ccccccCC--ceEEec---CCe-eEEEEc---C--eEEEeccHHHHHhcCCCC---
Q 002310 631 ----TVHPIGKAIVEAAEFSNC--QNVKVADG--TFIEEP---GSG-TVAIIE---D--RKVSVGTIDWLRSHGVDT--- 690 (937)
Q Consensus 631 ----s~hP~~~Ai~~~a~~~~~--~~~~~~~~--~~~~~~---g~g-~~~~i~---~--~~~~~G~~~~l~~~~~~~--- 690 (937)
..+|.+.||++.+++.+. +....... ...+.| .+. +...++ + ..++||+++.+.+.|...
T Consensus 408 ~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~ 487 (917)
T COG0474 408 GWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGEL 487 (917)
T ss_pred CceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcc
Confidence 569999999999998776 32211111 122333 222 223332 2 248999999998866521
Q ss_pred cch-----hh----HHHHHhCCCeE-----------------EEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEE
Q 002310 691 STF-----QE----VEMEDLMNQSL-----------------VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVY 744 (937)
Q Consensus 691 ~~~-----~~----~~~~~~~~~~~-----------------~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~ 744 (937)
.+. +. ..+...+|.++ ...+.|..|+|+++++||||+|++++|+.|+++||+||
T Consensus 488 ~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~ 567 (917)
T COG0474 488 EPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVW 567 (917)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEE
Confidence 000 10 11111112111 24566789999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCCCCc---------------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCC
Q 002310 745 MLSGDKKNSAEYVASLVGIPKD---------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDG 797 (937)
Q Consensus 745 mlTGD~~~tA~~iA~~~GI~~~---------------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG 797 (937)
|+||||+.||++||++|||..+ .||||++|+||.++|+.||+.|++|+|+|||
T Consensus 568 MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDG 647 (917)
T COG0474 568 MITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDG 647 (917)
T ss_pred EECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 9999999999999999997322 5899999999999999999999999999999
Q ss_pred cccHHHHHhCCeeEEeC-CChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 002310 798 INDAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVT 876 (937)
Q Consensus 798 ~NDa~AL~~AdVGIamg-~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~ 876 (937)
+||+||||+|||||||| +|+|+|+++||+++++|+|..+..++++||++|.|+++.+.|.+.+|+..+.+.+.. .++
T Consensus 648 vNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~--~~~ 725 (917)
T COG0474 648 VNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIY--SLF 725 (917)
T ss_pred chhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence 99999999999999998 799999999999999999999999999999999999999999999999855443321 112
Q ss_pred cccchHHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCCcccccccccc
Q 002310 877 GTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQL 931 (937)
Q Consensus 877 g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (937)
+....|+.+..++...-+...+.++.|.... +..+.++.||.+-+.++++..+
T Consensus 726 ~~~~~p~~~~qll~inll~d~~pa~~L~~~~--~~~~~m~~~~~~p~~~i~~~~~ 778 (917)
T COG0474 726 NLFFLPLTPLQLLWINLLTDSLPALALGVED--PESDVMKRPPRGPEEGLFNRKI 778 (917)
T ss_pred hcccccHHHHHHHHHHHHHhhhhhheeecCC--CcccccccCCCCccccccchhH
Confidence 3224578888888888888888888886664 4455677777777766665543
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-83 Score=798.83 Aligned_cols=580 Identities=20% Similarity=0.249 Sum_probs=468.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEE
Q 002310 325 FFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGV 404 (937)
Q Consensus 325 ~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgv 404 (937)
+|..++++++++++...+..+++.|+.+.+++|.++.|.+++|+|+ |++++|+++||+|||+|.|++||+|||||+
T Consensus 103 ~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRd----g~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~ 178 (997)
T TIGR01106 103 NLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRD----GEKMSINAEQVVVGDLVEVKGGDRIPADLR 178 (997)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC----CEEEEeeHHHCCCCCEEEECCCCEEeeeEE
Confidence 3445667777888888899999999999999999999999999987 589999999999999999999999999999
Q ss_pred Eeecc-eeeeeccccCCCcccccCCCC----------ccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChH
Q 002310 405 VRAGR-STVDESSFTGEPLPVTKIPES----------EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPV 473 (937)
Q Consensus 405 ll~G~-~~VDeS~LTGEs~pv~K~~g~----------~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l 473 (937)
|++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.+|++.+++++++.+++|+
T Consensus 179 il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl 258 (997)
T TIGR01106 179 IISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPI 258 (997)
T ss_pred EEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCcH
Confidence 99996 699999999999999998874 5999999999999999999999999999999999988889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHH
Q 002310 474 QRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGT 553 (937)
Q Consensus 474 ~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~ 553 (937)
|+.+++++.+++.++++++++++++|++.+ ..|..++.++++++++ +|||+|+ +++++++..+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~i~v~v~---~iP~~L~--~~v~i~l~~~~ 322 (997)
T TIGR01106 259 AIEIEHFIHIITGVAVFLGVSFFILSLILG-----------YTWLEAVIFLIGIIVA---NVPEGLL--ATVTVCLTLTA 322 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHhh---cCCccch--HHHHHHHHHHH
Confidence 999999999999988888887777765433 2456778888999999 9999998 99999999999
Q ss_pred HhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCC----CCC--CCHHHHHHHHHhc
Q 002310 554 SLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNP----IHP--LSETEILKFAAGV 627 (937)
Q Consensus 554 ~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~----~~~--~~~~~ll~~aa~~ 627 (937)
.+++++|+++|+++++|+||++++||||||||||+|+|+|.+++..+..+..+..... .+. ...+.++..++.+
T Consensus 323 ~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alc 402 (997)
T TIGR01106 323 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLC 402 (997)
T ss_pred HHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999876554432211100 010 1112455544443
Q ss_pred cc----------------CCCCChHHHHHHHHHhcCCccccc--cCCceEEec-----CCeeEEEE-c---C---eEEEe
Q 002310 628 ES----------------NTVHPIGKAIVEAAEFSNCQNVKV--ADGTFIEEP-----GSGTVAII-E---D---RKVSV 677 (937)
Q Consensus 628 e~----------------~s~hP~~~Ai~~~a~~~~~~~~~~--~~~~~~~~~-----g~g~~~~i-~---~---~~~~~ 677 (937)
.. ...+|.+.|+++++...+...... ......+.| .+...... + + ..+.|
T Consensus 403 n~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~K 482 (997)
T TIGR01106 403 NRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMK 482 (997)
T ss_pred CCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEe
Confidence 21 124789999999987543221111 011122222 22222221 1 1 23799
Q ss_pred ccHHHHHhcCCCC------cch-----h----hHHHHHhCCCeEEEEE------------------------ECCEEEEE
Q 002310 678 GTIDWLRSHGVDT------STF-----Q----EVEMEDLMNQSLVYVG------------------------VDNMLAGL 718 (937)
Q Consensus 678 G~~~~l~~~~~~~------~~~-----~----~~~~~~~~~~~~~~v~------------------------~~~~~lG~ 718 (937)
|+++.+.+.|... .+. + ..++...+|.+++.++ .|.+|+|+
T Consensus 483 GApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGl 562 (997)
T TIGR01106 483 GAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGL 562 (997)
T ss_pred CChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEE
Confidence 9999999988421 010 1 1223455677766554 35579999
Q ss_pred EEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--------------------------------
Q 002310 719 IYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------------------------- 766 (937)
Q Consensus 719 i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~-------------------------------- 766 (937)
++++||+|+|++++|++|+++||+|+|+|||+..||.++|+++||.++
T Consensus 563 i~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~ 642 (997)
T TIGR01106 563 ISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGS 642 (997)
T ss_pred EeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhH
Confidence 999999999999999999999999999999999999999999999311
Q ss_pred -------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeC-CChHHHHhhcCE
Q 002310 767 -------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASV 826 (937)
Q Consensus 767 -------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg-~gt~~a~~aADi 826 (937)
.||||++|+||.++|+.||+.|++|+|+|||+||+|||++|||||||| +|+|+|+++||+
T Consensus 643 ~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADi 722 (997)
T TIGR01106 643 DLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADM 722 (997)
T ss_pred HhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhce
Confidence 299999999999999999999999999999999999999999999999 899999999999
Q ss_pred EEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhccc
Q 002310 827 VLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLK 906 (937)
Q Consensus 827 vL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~ 906 (937)
||++|+|+.|++++++||+++.|+++++.|.++.|+..+.+.+.. .+++ .-.|+.+..++.++-+...+.++.|.+.
T Consensus 723 vL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~--~~~~-~~~pl~~~qlL~inli~d~lp~~al~~e 799 (997)
T TIGR01106 723 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIF--IIAN-IPLPLGTITILCIDLGTDMVPAISLAYE 799 (997)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH--HHHc-CcchhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999766554322 2233 2357777778888888888888888663
Q ss_pred cccccccccCCCCCCc-ccccccc
Q 002310 907 FSSKQKASFQAPSSRV-NSNVDSH 929 (937)
Q Consensus 907 ~~~~~~~~~~~~~~~~-~~~~~~~ 929 (937)
+...+.+++||++. +..+.+.
T Consensus 800 --~~~~~~m~~~P~~~~~~~l~~~ 821 (997)
T TIGR01106 800 --KAESDIMKRQPRNPKTDKLVNE 821 (997)
T ss_pred --CCCcccccCCCcCCccccccCH
Confidence 45555788888764 4444443
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-82 Score=794.53 Aligned_cols=583 Identities=20% Similarity=0.225 Sum_probs=460.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEE
Q 002310 326 FEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVV 405 (937)
Q Consensus 326 f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvl 405 (937)
|..++++++++++...+..++++|+++++++|+++.+.+++|+|+ |++++|+++||||||||.|++||+||||++|
T Consensus 81 ~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRd----g~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 81 WIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRN----GKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeC----CeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 345677888888899999999999999999999999999999987 6899999999999999999999999999999
Q ss_pred eec-ceeeeeccccCCCcccccCCC---------------CccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhc-
Q 002310 406 RAG-RSTVDESSFTGEPLPVTKIPE---------------SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQS- 468 (937)
Q Consensus 406 l~G-~~~VDeS~LTGEs~pv~K~~g---------------~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~- 468 (937)
+++ ++.||||+|||||.|+.|.+. +.+|+||.+.+|.++++|++||.+|.+|||.+++.+.+.
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 997 589999999999999999742 358999999999999999999999999999999865431
Q ss_pred ----------------------------------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccC
Q 002310 469 ----------------------------------REAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYG 514 (937)
Q Consensus 469 ----------------------------------~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~ 514 (937)
.+||+|+.+++++.++..+.+++++++|++..+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~------------ 304 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD------------ 304 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------------
Confidence 2499999999999988777777776666543210
Q ss_pred CcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEE
Q 002310 515 GPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVT 594 (937)
Q Consensus 515 ~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~ 594 (937)
.+...+.+++++++. ++|.+|+ ..+.++++.+..+++++++++|+++++|+||++++||+|||||||+|+|+|+
T Consensus 305 -~~~~~~~~av~l~Va---~VPegLp--~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~ 378 (1053)
T TIGR01523 305 -VDKEVAIYAICLAIS---IIPESLI--AVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIAR 378 (1053)
T ss_pred -hhHHHHHHHHHHHHH---HcccchH--HHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEE
Confidence 013455667888888 9999999 9999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCC-c---------CCCCC-C---------------C----C---------C----CCCCC---HHHHHHHHHhcc
Q 002310 595 KVVTSGS-L---------TDPNS-K---------------Q----N---------P----IHPLS---ETEILKFAAGVE 628 (937)
Q Consensus 595 ~i~~~~~-~---------~~~~~-~---------------~----~---------~----~~~~~---~~~ll~~aa~~e 628 (937)
+++..+. . |+++. . . + . ..... ..+++..++.+.
T Consensus 379 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn 458 (1053)
T TIGR01523 379 QIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALAN 458 (1053)
T ss_pred EEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhcc
Confidence 9986531 1 11100 0 0 0 0 00000 123444333321
Q ss_pred c-------------CCCCChHHHHHHHHHhcCCccc------cc---------------------cCCceEEec---CCe
Q 002310 629 S-------------NTVHPIGKAIVEAAEFSNCQNV------KV---------------------ADGTFIEEP---GSG 665 (937)
Q Consensus 629 ~-------------~s~hP~~~Ai~~~a~~~~~~~~------~~---------------------~~~~~~~~~---g~g 665 (937)
. ...+|.+.|+++++...+.+.. .. ......+.| .+.
T Consensus 459 ~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK 538 (1053)
T TIGR01523 459 IATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIK 538 (1053)
T ss_pred CCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCC
Confidence 0 1258999999999987665310 00 001111222 222
Q ss_pred -eEEEEc---Ce---EEEeccHHHHHhcCCCCc--------ch---------hhHHHHHhCCCeEEEEEE----------
Q 002310 666 -TVAIIE---DR---KVSVGTIDWLRSHGVDTS--------TF---------QEVEMEDLMNQSLVYVGV---------- 711 (937)
Q Consensus 666 -~~~~i~---~~---~~~~G~~~~l~~~~~~~~--------~~---------~~~~~~~~~~~~~~~v~~---------- 711 (937)
+...+. +. .++||+++.+.+.|.... +. +..++++.+|.+++.+++
T Consensus 539 ~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~ 618 (1053)
T TIGR01523 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNND 618 (1053)
T ss_pred eEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccc
Confidence 222221 22 378999999999885321 11 112345567777766552
Q ss_pred ---------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc----------
Q 002310 712 ---------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---------- 766 (937)
Q Consensus 712 ---------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~---------- 766 (937)
|.+|+|+++++||+|++++++|+.||++||+|+|+|||++.||.+||+++||.+.
T Consensus 619 ~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~ 698 (1053)
T TIGR01523 619 DQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIM 698 (1053)
T ss_pred hhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccc
Confidence 5679999999999999999999999999999999999999999999999999532
Q ss_pred -------------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeC-CChHHH
Q 002310 767 -------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAA 820 (937)
Q Consensus 767 -------------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg-~gt~~a 820 (937)
.||||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||| +|+|+|
T Consensus 699 ~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~va 778 (1053)
T TIGR01523 699 DSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVA 778 (1053)
T ss_pred cceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHH
Confidence 389999999999999999999999999999999999999999999999 899999
Q ss_pred HhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhc-cccccchHHHHHHHhhhhHHHHHH
Q 002310 821 SEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAA-GVLLP-VTGTMLTPSIAGALMGLSSIGVMA 898 (937)
Q Consensus 821 ~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~-~~~~~-~~g~~l~P~~a~~~m~~ssl~v~~ 898 (937)
+++||++|++|+|+.|++++++||++++||++++.|.++.|+..+.+.+ +.++. +.|....|+.+..+.+..-+...+
T Consensus 779 k~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~ 858 (1053)
T TIGR01523 779 KDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCF 858 (1053)
T ss_pred HHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999996655443 22221 113223466666777777777778
Q ss_pred HHhhhccccccccccccCCCCCCccccccccccc
Q 002310 899 NSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQLM 932 (937)
Q Consensus 899 nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (937)
.++.|.+ .++..+.+++||++.+.++.+..+.
T Consensus 859 palaL~~--e~~~~~~m~~~Pr~~~~~l~~~~~~ 890 (1053)
T TIGR01523 859 PAMGLGL--EKAAPDLMDRLPHDNEVGIFQKELI 890 (1053)
T ss_pred HHHhhcc--CCCChhHHhcCCCCCCccccCHHHH
Confidence 8877765 4566667999999988888886543
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-80 Score=772.29 Aligned_cols=589 Identities=21% Similarity=0.232 Sum_probs=465.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEe
Q 002310 327 EEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVR 406 (937)
Q Consensus 327 ~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll 406 (937)
..++++++++++...+..++++|+++.+++|.++.|.+++|+|+ |++++|+++||+|||+|.|++||+|||||+|+
T Consensus 37 ~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd----g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll 112 (917)
T TIGR01116 37 VEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD----GRWSVIKAKDLVPGDIVELAVGDKVPADIRVL 112 (917)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC----CEEEEEEHHHCCCCCEEEECCCCEeeccEEEE
Confidence 35667777788888889999999999999999999999999987 58999999999999999999999999999999
Q ss_pred ecc-eeeeeccccCCCcccccCCC-------------CccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCCh
Q 002310 407 AGR-STVDESSFTGEPLPVTKIPE-------------SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAP 472 (937)
Q Consensus 407 ~G~-~~VDeS~LTGEs~pv~K~~g-------------~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~ 472 (937)
+|+ +.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|||.+++++++.+++|
T Consensus 113 ~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~ 192 (917)
T TIGR01116 113 SLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTP 192 (917)
T ss_pred EecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCC
Confidence 985 89999999999999999875 7799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-ccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHH
Q 002310 473 VQRLADQVSGHFTYGVIALSAATFVFWNLFGAHV-LPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYV 551 (937)
Q Consensus 473 l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~-~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~ 551 (937)
+|+.+++++.+++++++++++++|+++....... ....+. ..+...+..++++++. +|||+|+ ++++++++.
T Consensus 193 lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~l~v~---~iP~~Lp--~~vti~l~~ 265 (917)
T TIGR01116 193 LQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWI--QGAIYYFKIAVALAVA---AIPEGLP--AVITTCLAL 265 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhH--HHHHHHHHHHHhhhhh---ccccccH--HHHHHHHHH
Confidence 9999999999998888877777766553221100 000000 1223455567788888 9999999 999999999
Q ss_pred HHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcC-------------CCCCCC-CCC---CC
Q 002310 552 GTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLT-------------DPNSKQ-NPI---HP 614 (937)
Q Consensus 552 ~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~-------------~~~~~~-~~~---~~ 614 (937)
+..+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+ ++.... ... ..
T Consensus 266 ~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (917)
T TIGR01116 266 GTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAG 345 (917)
T ss_pred HHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccc
Confidence 9999999999999999999999999999999999999999999998764221 100000 000 00
Q ss_pred CC---HHHHHHHHHhccc-------------CCCCChHHHHHHHHHhcCCcccccc---------------C---CceEE
Q 002310 615 LS---ETEILKFAAGVES-------------NTVHPIGKAIVEAAEFSNCQNVKVA---------------D---GTFIE 660 (937)
Q Consensus 615 ~~---~~~ll~~aa~~e~-------------~s~hP~~~Ai~~~a~~~~~~~~~~~---------------~---~~~~~ 660 (937)
.. ..+++..++.+.. ...+|.+.|+++++++.+.+..... . ....+
T Consensus 346 ~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (917)
T TIGR01116 346 GQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLAT 425 (917)
T ss_pred cchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeee
Confidence 00 1223333322211 1258999999999887665422110 0 01111
Q ss_pred ec----CCeeEEEEc--C--eEEEeccHHHHHhcCCCCc-------ch-----h----hHHHHHh-CCCeEEEEEE----
Q 002310 661 EP----GSGTVAIIE--D--RKVSVGTIDWLRSHGVDTS-------TF-----Q----EVEMEDL-MNQSLVYVGV---- 711 (937)
Q Consensus 661 ~~----g~g~~~~i~--~--~~~~~G~~~~l~~~~~~~~-------~~-----~----~~~~~~~-~~~~~~~v~~---- 711 (937)
.| .+.+...++ + ..+.||+++.+.+.|.... +. + ..++.+. +|.+++.+++
T Consensus 426 ~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~ 505 (917)
T TIGR01116 426 LEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIP 505 (917)
T ss_pred cccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECC
Confidence 12 122233332 2 3488999999999885321 11 0 1223455 7777776652
Q ss_pred -------------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-------
Q 002310 712 -------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK------- 765 (937)
Q Consensus 712 -------------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~------- 765 (937)
|.+|+|+++++||+|++++++|+.||++||+++|+|||+++||.++|+++||..
T Consensus 506 ~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~ 585 (917)
T TIGR01116 506 DPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTF 585 (917)
T ss_pred ccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccc
Confidence 457999999999999999999999999999999999999999999999999954
Q ss_pred ----------------------ceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhh
Q 002310 766 ----------------------DKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV 823 (937)
Q Consensus 766 ----------------------~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~a 823 (937)
..||||++|+||.++|+.||+.|++|+|+|||+||+|||++|||||+||+|+++++++
T Consensus 586 ~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~a 665 (917)
T TIGR01116 586 KSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEA 665 (917)
T ss_pred eeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHh
Confidence 1599999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhh
Q 002310 824 ASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLL 903 (937)
Q Consensus 824 ADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l 903 (937)
||+++.+|+|+.|++++++||++++|+++++.|.++.|+..+.+.+... ++| .-.|+-+..+..++.+...+.++.|
T Consensus 666 AD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~--~~~-~~~pl~~~qll~inli~d~lp~~~l 742 (917)
T TIGR01116 666 SDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTA--ALG-IPEGLIPVQLLWVNLVTDGLPATAL 742 (917)
T ss_pred cCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH--HHc-CCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997655443221 123 2256666677777778888888887
Q ss_pred ccccccccccccCCCCCCcccccccccc
Q 002310 904 RLKFSSKQKASFQAPSSRVNSNVDSHQL 931 (937)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (937)
.+..+ ..+.+++||.+.+..+++..+
T Consensus 743 ~~~~~--~~~~m~~pP~~~~~~l~~~~~ 768 (917)
T TIGR01116 743 GFNPP--DKDIMWKPPRRPDEPLITGWL 768 (917)
T ss_pred hcCCc--chhHhcCCCCCCCCCcccHHH
Confidence 65533 366688999887777766543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-80 Score=729.29 Aligned_cols=477 Identities=32% Similarity=0.436 Sum_probs=431.4
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhc--CCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecce
Q 002310 333 IAFVLLGKNLEQRAKIKATSDMTGLLG--ILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRS 410 (937)
Q Consensus 333 l~~~llg~~le~~~~~k~~~~l~~l~~--~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~ 410 (937)
+++++++.+++.++++++.+.+++|.+ ..|++++++|+ | +++|++++|+|||+|.+++||+|||||+|++|++
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~----g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~ 77 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRN----G-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC 77 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEEC----C-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE
Confidence 456788999999999999999999998 89999999985 5 7899999999999999999999999999999999
Q ss_pred eeeeccccCCCcccccCCCCccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHH-HHHHHHHH
Q 002310 411 TVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVS-GHFTYGVI 489 (937)
Q Consensus 411 ~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~-~~~~~~vl 489 (937)
.||||+|||||.|+.|.+|+.+++|+.+.+|+++++|+++|.+|..+++...+++++..++++++..+++. .+|+++++
T Consensus 78 ~vdes~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~ 157 (499)
T TIGR01494 78 FVDESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVL 157 (499)
T ss_pred EEEcccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999 89999999
Q ss_pred HHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHH
Q 002310 490 ALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNIL 569 (937)
Q Consensus 490 ~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~l 569 (937)
+++++++++|++.... ..+|..++.++++++++ +|||+|+ +++|+++..+..+++++|+++|+++++
T Consensus 158 ~la~~~~~~~~~~~~~--------~~~~~~~~~~~~~vl~~---~~P~aL~--~~~~~~~~~~~~~~~~~gilvk~~~~l 224 (499)
T TIGR01494 158 LIALAVFLFWAIGLWD--------PNSIFKIFLRALILLVI---AIPIALP--LAVTIALAVGDARLAKKGIVVRSLNAL 224 (499)
T ss_pred HHHHHHHHHHHHHHcc--------cccHHHHHHHHHHHHHH---hcCCcHH--HHHHHHHHHHHHHHHHCCcEEechhhh
Confidence 9999888888654321 01357789999999999 9999999 999999999999999999999999999
Q ss_pred hhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCc
Q 002310 570 EKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQ 649 (937)
Q Consensus 570 E~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~ 649 (937)
|+|+++|++|||||||||+|+|++.++++.+ . |..+.||+++|++++++.....
T Consensus 225 E~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~-------------~-------------~~~s~hp~~~ai~~~~~~~~~~ 278 (499)
T TIGR01494 225 EELGKVDYICSDKTGTLTKNEMSFKKVSVLG-------------G-------------EYLSGHPDERALVKSAKWKILN 278 (499)
T ss_pred hhccCCcEEEeeCCCccccCceEEEEEEecC-------------C-------------CcCCCChHHHHHHHHhhhcCcc
Confidence 9999999999999999999999999998641 1 4678999999999998754321
Q ss_pred cccccCCceEEecCCeeEEEEcC--eEEEeccHHHHHhcCCCCcchhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCCh
Q 002310 650 NVKVADGTFIEEPGSGTVAIIED--RKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRD 727 (937)
Q Consensus 650 ~~~~~~~~~~~~~g~g~~~~i~~--~~~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~ 727 (937)
..+|...+ +|+.+.+++ +.+.+|+++++.+.|... .+..+.....+.+.++++++++++|++.++|++|+
T Consensus 279 -----~~~f~~~~-~~~~~~~~~~~~~~~~G~~~~i~~~~~~~--~~~~~~~~~~g~~~~~~a~~~~~~g~i~l~d~lr~ 350 (499)
T TIGR01494 279 -----VFEFSSVR-KRMSVIVRGPDGTYVKGAPEFVLSRVKDL--EEKVKELAQSGLRVLAVASKETLLGLLGLEDPLRD 350 (499)
T ss_pred -----eeccCCCC-ceEEEEEecCCcEEEeCCHHHHHHhhHHH--HHHHHHHHhCCCEEEEEEECCeEEEEEEecCCCch
Confidence 23455555 677777764 579999999998876421 11222345578899999999999999999999999
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhC
Q 002310 728 DAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASS 807 (937)
Q Consensus 728 ~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~A 807 (937)
+++++|+.|+++|++++|+|||++.+|..+|+++|| +++++|+||.++|+.+|++|+.|+|+|||+||+|||++|
T Consensus 351 ~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-----~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~A 425 (499)
T TIGR01494 351 DAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-----FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKA 425 (499)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-----eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhC
Confidence 999999999999999999999999999999999997 799999999999999999999999999999999999999
Q ss_pred CeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 002310 808 HIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGV 871 (937)
Q Consensus 808 dVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~ 871 (937)
||||+|+ |+++||++|+++++..++.++++||+++++++||+.|+++||++.+++++++
T Consensus 426 dvgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 426 DVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred CCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999997 7899999999999999999999999999999999999999999999998753
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-78 Score=758.64 Aligned_cols=565 Identities=18% Similarity=0.202 Sum_probs=435.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEc--CCCEEeee
Q 002310 325 FFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVL--PGDRIPAD 402 (937)
Q Consensus 325 ~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~--~Ge~IPaD 402 (937)
||..++++++++++...+..++++|+.+.++++.. .|..++|+|+ |++++|+++||+|||+|.|+ +|++||||
T Consensus 192 ~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rd----g~~~~I~s~eLvpGDiv~l~~~~g~~iPaD 266 (1054)
T TIGR01657 192 YYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRN----GKWVTIASDELVPGDIVSIPRPEEKTMPCD 266 (1054)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEEC----CEEEEEEcccCCCCCEEEEecCCCCEecce
Confidence 55567778888888999999999999999888755 5789999987 58999999999999999999 99999999
Q ss_pred EEEeecceeeeeccccCCCcccccCCC------------------Cccccceeeec-------ceEEEEEEecCCccHHH
Q 002310 403 GVVRAGRSTVDESSFTGEPLPVTKIPE------------------SEVAAGSINLN-------GTLTVEVRRPGGETAMG 457 (937)
Q Consensus 403 gvll~G~~~VDeS~LTGEs~pv~K~~g------------------~~v~aGt~~~~-------G~~~~~V~~~G~~T~~~ 457 (937)
|+|++|++.||||+|||||.|+.|.+. +.+|+||.+.+ |.+.++|++||.+|..|
T Consensus 267 ~~ll~g~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G 346 (1054)
T TIGR01657 267 SVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKG 346 (1054)
T ss_pred EEEEeCcEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccch
Confidence 999999999999999999999999762 24999999984 78999999999999999
Q ss_pred HHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhccccccc
Q 002310 458 DIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCC 537 (937)
Q Consensus 458 ~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pc 537 (937)
++++.+..++..++++++.+.++..++. +++++.++++++.+. ..+.++...+.+++.++++ ++|+
T Consensus 347 ~i~~~i~~~~~~~~~~~~~~~~~~~~l~----~~a~i~~i~~~~~~~-------~~~~~~~~~~l~~l~iiv~---~vP~ 412 (1054)
T TIGR01657 347 QLVRSILYPKPRVFKFYKDSFKFILFLA----VLALIGFIYTIIELI-------KDGRPLGKIILRSLDIITI---VVPP 412 (1054)
T ss_pred HHHHHhhCCCCCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHH-------HcCCcHHHHHHHHHHHHHh---hcCc
Confidence 9999999888888999888777654433 333333332222111 1234677888899999999 9999
Q ss_pred ccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCH
Q 002310 538 LSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSE 617 (937)
Q Consensus 538 al~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 617 (937)
+|+ +++++++..++.+++++|+++|++.++|.+|++|++|||||||||+|+|.|.+++..+.................
T Consensus 413 ~LP--~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~ 490 (1054)
T TIGR01657 413 ALP--AELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKP 490 (1054)
T ss_pred hHH--HHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCc
Confidence 999 999999999999999999999999999999999999999999999999999999875432111000000000111
Q ss_pred HHHHHHHHhcc-------cCCCCChHHHHHHHHHhcCCc--c--cccc----------CCc------eEEecCC-e--eE
Q 002310 618 TEILKFAAGVE-------SNTVHPIGKAIVEAAEFSNCQ--N--VKVA----------DGT------FIEEPGS-G--TV 667 (937)
Q Consensus 618 ~~ll~~aa~~e-------~~s~hP~~~Ai~~~a~~~~~~--~--~~~~----------~~~------~~~~~g~-g--~~ 667 (937)
..++...+.+. ....+|++.|+++++...-.. . .... ... +...+.+ . +.
T Consensus 491 ~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvv 570 (1054)
T TIGR01657 491 SITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVI 570 (1054)
T ss_pred hHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEE
Confidence 22222222221 234799999999986421000 0 0000 011 1111111 1 22
Q ss_pred EEEc--Ce--EEEeccHHHHHhcCCCCc---c-hhhHHHHHhCCCeEEEEEE---------------------CCEEEEE
Q 002310 668 AIIE--DR--KVSVGTIDWLRSHGVDTS---T-FQEVEMEDLMNQSLVYVGV---------------------DNMLAGL 718 (937)
Q Consensus 668 ~~i~--~~--~~~~G~~~~l~~~~~~~~---~-~~~~~~~~~~~~~~~~v~~---------------------~~~~lG~ 718 (937)
.... ++ .+.||+||.+.+.|.... . .+..+.+..+|.+++.+++ |.+|+|+
T Consensus 571 v~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGl 650 (1054)
T TIGR01657 571 VSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGF 650 (1054)
T ss_pred EEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEE
Confidence 2222 22 589999999999987422 1 1234456778888888763 4689999
Q ss_pred EEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--------------------------------
Q 002310 719 IYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------------------------- 766 (937)
Q Consensus 719 i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~-------------------------------- 766 (937)
++|+||+||+++++|+.||++||+|+|+||||+.||.+||+++||.+.
T Consensus 651 i~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1054)
T TIGR01657 651 IVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFAS 730 (1054)
T ss_pred EEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcccccc
Confidence 999999999999999999999999999999999999999999999210
Q ss_pred -------------------------------------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCC
Q 002310 767 -------------------------------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDG 797 (937)
Q Consensus 767 -------------------------------------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG 797 (937)
.||||++|+||.++|+.||+.|++|+|||||
T Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG 810 (1054)
T TIGR01657 731 TQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDG 810 (1054)
T ss_pred ccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4999999999999999999999999999999
Q ss_pred cccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 002310 798 INDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTG 877 (937)
Q Consensus 798 ~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g 877 (937)
+||+||||+||||||||++ |++ .+||+++.+++|+.|+++|++||+++.++++.+.|.+.|+++..... ..++ ..|
T Consensus 811 ~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~-~~l~-~~~ 886 (1054)
T TIGR01657 811 ANDCGALKQADVGISLSEA-EAS-VAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSV-SILY-LIG 886 (1054)
T ss_pred hHHHHHHHhcCcceeeccc-cce-eecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-Hcc
Confidence 9999999999999999854 444 89999999999999999999999999999999999999998764332 2222 234
Q ss_pred ccchHHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCC
Q 002310 878 TMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPS 919 (937)
Q Consensus 878 ~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~ 919 (937)
..++| ..++....++....++.|.+.+|.+. .+++||
T Consensus 887 ~~l~~---~Q~l~i~li~~~~~~l~l~~~~p~~~--l~~~~P 923 (1054)
T TIGR01657 887 SNLGD---GQFLTIDLLLIFPVALLMSRNKPLKK--LSKERP 923 (1054)
T ss_pred CcCcc---HHHHHHHHHHHHHHHHHHHcCCchhh--cCCCCC
Confidence 33444 45667777788888888866644443 355555
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-69 Score=687.04 Aligned_cols=619 Identities=15% Similarity=0.111 Sum_probs=450.6
Q ss_pred hccHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 002310 276 GPGFQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMT 355 (937)
Q Consensus 276 ~~g~~~~~~a~~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~ 355 (937)
|..|.|++..+..++++..|+.+|+...+.....++ ..++..++.+.++++++..+++++|++.++++++.++
T Consensus 11 Y~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s-------~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n 83 (1057)
T TIGR01652 11 YTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILS-------PTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVN 83 (1057)
T ss_pred CcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcC-------CCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHh
Confidence 556788888888899999999998754433221111 1234456667777777889999999999999987654
Q ss_pred HhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEee-----cceeeeeccccCCCcccccCCC-
Q 002310 356 GLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA-----GRSTVDESSFTGEPLPVTKIPE- 429 (937)
Q Consensus 356 ~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~-----G~~~VDeS~LTGEs~pv~K~~g- 429 (937)
++.++|+|++ |++++++++||+|||+|.|++||+||||++|++ |.++||||.|||||.|+.|.+.
T Consensus 84 ------~~~~~v~~~~---~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~ 154 (1057)
T TIGR01652 84 ------NRLTEVLEGH---GQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALE 154 (1057)
T ss_pred ------CcEEEEECCC---CcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecch
Confidence 4788998763 478999999999999999999999999999996 7799999999999999988642
Q ss_pred -----------------------------------------------Cccccceeeec-ceEEEEEEecCCccHHHHHHH
Q 002310 430 -----------------------------------------------SEVAAGSINLN-GTLTVEVRRPGGETAMGDIVR 461 (937)
Q Consensus 430 -----------------------------------------------~~v~aGt~~~~-G~~~~~V~~~G~~T~~~~i~~ 461 (937)
+.+++||.+.+ |.+.+.|++||.+|.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~--- 231 (1057)
T TIGR01652 155 ETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMR--- 231 (1057)
T ss_pred hhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhh---
Confidence 34678888888 899999999999997755
Q ss_pred HHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhcc------C---CcHHHHHHHHHHHHhhcc
Q 002310 462 LVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQY------G---GPVSLALQLSCSVLRKET 532 (937)
Q Consensus 462 ~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~------~---~~~~~~l~~ai~vlvv~~ 532 (937)
.....+.+++++++.++++..++..+.++++++.+++..++........++. . ..+...+..++.++..
T Consensus 232 n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~-- 309 (1057)
T TIGR01652 232 NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSS-- 309 (1057)
T ss_pred cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhh--
Confidence 3445567789999999999888777777777666665333221000000100 0 0122234445555555
Q ss_pred cccccccchhhHHHHHHHHHH------Hhhhc----CcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCc
Q 002310 533 SICCCLSMCPWLSHAYSYVGT------SLGAT----RGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSL 602 (937)
Q Consensus 533 ~~~Pcal~~pla~p~a~~~~~------~~~a~----~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~ 602 (937)
.+|.+|. ..+.++..... .++.+ +++++|+.+.+|+||+|++||+|||||||+|+|++++++..+..
T Consensus 310 -~IPisL~--v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~ 386 (1057)
T TIGR01652 310 -LIPISLY--VSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVS 386 (1057)
T ss_pred -hcceeee--ehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEE
Confidence 8999998 88888877776 56665 35999999999999999999999999999999999999987665
Q ss_pred CCCCCCC--------C------------C-----------------CCCCC--HHHHHHHHH-hc----c---c------
Q 002310 603 TDPNSKQ--------N------------P-----------------IHPLS--ETEILKFAA-GV----E---S------ 629 (937)
Q Consensus 603 ~~~~~~~--------~------------~-----------------~~~~~--~~~ll~~aa-~~----e---~------ 629 (937)
|+..... . . ..... ..+++..++ +. + .
T Consensus 387 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~ 466 (1057)
T TIGR01652 387 YGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEIT 466 (1057)
T ss_pred ecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceE
Confidence 5422100 0 0 00000 012222111 11 1 1
Q ss_pred -CCCCChHHHHHHHHHhcCCccccccCC-------------ceE---Eec----CCeeEEEEc--C---eEEEeccHHHH
Q 002310 630 -NTVHPIGKAIVEAAEFSNCQNVKVADG-------------TFI---EEP----GSGTVAIIE--D---RKVSVGTIDWL 683 (937)
Q Consensus 630 -~s~hP~~~Ai~~~a~~~~~~~~~~~~~-------------~~~---~~~----g~g~~~~i~--~---~~~~~G~~~~l 683 (937)
.+.+|.+.|++++++..|+.....+.. .+. ..| .+.+...++ + ..++||+++.+
T Consensus 467 y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~i 546 (1057)
T TIGR01652 467 YQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVI 546 (1057)
T ss_pred EEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHH
Confidence 146899999999999887754322211 111 011 122333332 2 24799999999
Q ss_pred HhcCCCCc--c----hhhHHHHHhCCCeEEEEE--------------------------------------ECCEEEEEE
Q 002310 684 RSHGVDTS--T----FQEVEMEDLMNQSLVYVG--------------------------------------VDNMLAGLI 719 (937)
Q Consensus 684 ~~~~~~~~--~----~~~~~~~~~~~~~~~~v~--------------------------------------~~~~~lG~i 719 (937)
.+.|.... . .+..++...+|.+++.++ .|.+|+|++
T Consensus 547 l~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~ 626 (1057)
T TIGR01652 547 FKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGAT 626 (1057)
T ss_pred HHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEE
Confidence 98775321 1 112334556677776654 367899999
Q ss_pred EecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc---------------------------------
Q 002310 720 YVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--------------------------------- 766 (937)
Q Consensus 720 ~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--------------------------------- 766 (937)
+++|+||+|++++|+.||++||+|||+|||+.+||.+||++|||.+.
T Consensus 627 gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~ 706 (1057)
T TIGR01652 627 AIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEF 706 (1057)
T ss_pred EEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999997210
Q ss_pred ---------------------------------------eeEeccChhhHHHHHHHHhcC-CCEEEEEcCCcccHHHHHh
Q 002310 767 ---------------------------------------KVLSGVKPNEKKRFINELQND-ENVVAMVGDGINDAAALAS 806 (937)
Q Consensus 767 ---------------------------------------~v~ar~~Pe~K~~iV~~Lq~~-G~~VamvGDG~NDa~AL~~ 806 (937)
.||||++|+||.++|+.+|+. |++|+|+|||+||+|||++
T Consensus 707 ~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~ 786 (1057)
T TIGR01652 707 NNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQE 786 (1057)
T ss_pred hhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhh
Confidence 289999999999999999998 9999999999999999999
Q ss_pred CCeeEEeC-CChHHHHhhcCEEEeCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhc-cccccchH
Q 002310 807 SHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVAL-ELSRLTMKTVKQNLWWAFGYNIVGIPIAA-GVLLP-VTGTMLTP 882 (937)
Q Consensus 807 AdVGIamg-~gt~~a~~aADivL~~~~l~~l~~~i-~~~R~~~~~i~~nl~~a~~~Nii~i~la~-~~~~~-~~g~~l~P 882 (937)
|||||++. .....|+++||+++.+ |+.|.+++ .+||+.++++++.+.|.++.|++.+.+-+ +.++. +.| .+|
T Consensus 787 AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~--~~~ 862 (1057)
T TIGR01652 787 ADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSG--QTL 862 (1057)
T ss_pred cCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc--HHH
Confidence 99999984 2222578899999974 99999998 77999999999999999999986554432 22221 122 345
Q ss_pred HHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCCc
Q 002310 883 SIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRV 922 (937)
Q Consensus 883 ~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~ 922 (937)
+-...++.+..+...+.++.+.....+..++.++++|..+
T Consensus 863 ~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly 902 (1057)
T TIGR01652 863 YEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLY 902 (1057)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHH
Confidence 5555666778888888887775544444455677777644
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-72 Score=638.65 Aligned_cols=610 Identities=21% Similarity=0.254 Sum_probs=451.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCC
Q 002310 296 MNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKD 375 (937)
Q Consensus 296 md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g 375 (937)
..+|+-+++..+|+...+..-..+...+...-.++++...+.+.-....++..|..+.++.+.++.|..++|+|+ |
T Consensus 96 ~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRd----g 171 (1019)
T KOG0203|consen 96 FSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRD----G 171 (1019)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeec----c
Confidence 456777777777664332222111111112222344444444555566777888889999999999999999998 6
Q ss_pred eEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecc-eeeeeccccCCCcccccCCC----------CccccceeeecceEE
Q 002310 376 SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR-STVDESSFTGEPLPVTKIPE----------SEVAAGSINLNGTLT 444 (937)
Q Consensus 376 ~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~-~~VDeS~LTGEs~pv~K~~g----------~~v~aGt~~~~G~~~ 444 (937)
+.+.+..+||++||+|.++-||+||||.+++++. ++||+|+|||||+|.++.+. +.-|.+|.+++|+.+
T Consensus 172 ~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~ 251 (1019)
T KOG0203|consen 172 EKMTINAEELVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGR 251 (1019)
T ss_pred eeEEechhhcccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEE
Confidence 8899999999999999999999999999999986 79999999999999998763 346889999999999
Q ss_pred EEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHH
Q 002310 445 VEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLS 524 (937)
Q Consensus 445 ~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~a 524 (937)
+.|.+||.+|.+|+|..+-..-+..++|+++.++++..+.+...+.+.+..|++.... |..|..++.+.
T Consensus 252 givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~-----------gy~~l~avv~~ 320 (1019)
T KOG0203|consen 252 GIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL-----------GYEWLRAVVFL 320 (1019)
T ss_pred EEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-----------cchhHHHhhhh
Confidence 9999999999999999998888889999999999988877766666666555443333 33567777778
Q ss_pred HHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCC
Q 002310 525 CSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTD 604 (937)
Q Consensus 525 i~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~ 604 (937)
+.+++. .+|.+|. ..+...+.....+++++++++|+.++.|+||...+||+|||||||+|+|.|.++|..+....
T Consensus 321 i~iivA---nvPeGL~--~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~ 395 (1019)
T KOG0203|consen 321 IGIIVA---NVPEGLL--ATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHE 395 (1019)
T ss_pred heeEEe---cCcCCcc--ceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceee
Confidence 888888 9999998 88888889999999999999999999999999999999999999999999999998765443
Q ss_pred CCCCCCCC------CCCCHHHHHHHHHhccc----------------CCCCChHHHHHHHHHhcCCc--cc-----cccC
Q 002310 605 PNSKQNPI------HPLSETEILKFAAGVES----------------NTVHPIGKAIVEAAEFSNCQ--NV-----KVAD 655 (937)
Q Consensus 605 ~~~~~~~~------~~~~~~~ll~~aa~~e~----------------~s~hP~~~Ai~~~a~~~~~~--~~-----~~~~ 655 (937)
.+...+.. ....-.++.+.+..+.. -..++.+.|++++++..-.. .. ++.+
T Consensus 396 ~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~e 475 (1019)
T KOG0203|consen 396 ADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAE 475 (1019)
T ss_pred eechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhc
Confidence 33211110 11122334443332211 12467788998887642111 00 1111
Q ss_pred CceEEecCCeeEEEE-------cCeEEEeccHHHHHhcCCCCc------chhhHH---------HHHhCC----------
Q 002310 656 GTFIEEPGSGTVAII-------EDRKVSVGTIDWLRSHGVDTS------TFQEVE---------MEDLMN---------- 703 (937)
Q Consensus 656 ~~~~~~~g~g~~~~i-------~~~~~~~G~~~~l~~~~~~~~------~~~~~~---------~~~~~~---------- 703 (937)
..|......-+.... +.-.+.||+++.+.+.|.... +..+.. .....|
T Consensus 476 ipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~ 555 (1019)
T KOG0203|consen 476 IPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLE 555 (1019)
T ss_pred CCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHh
Confidence 111111111111111 112378899999999886321 111100 000001
Q ss_pred -------CeEEEE-------EECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC----
Q 002310 704 -------QSLVYV-------GVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---- 765 (937)
Q Consensus 704 -------~~~~~v-------~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---- 765 (937)
.+..+- -.++.|+|++++-||+|..+++++..||.+||||+|+|||++.||+++|+++||..
T Consensus 556 l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~e 635 (1019)
T KOG0203|consen 556 LPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSE 635 (1019)
T ss_pred cchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCch
Confidence 111111 12568999999999999999999999999999999999999999999999999721
Q ss_pred -----------------------------------------------ceeEeccChhhHHHHHHHHhcCCCEEEEEcCCc
Q 002310 766 -----------------------------------------------DKVLSGVKPNEKKRFINELQNDENVVAMVGDGI 798 (937)
Q Consensus 766 -----------------------------------------------~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~ 798 (937)
+.||||.+|+||+.||+.+|+.|.+|+++|||+
T Consensus 636 t~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGV 715 (1019)
T KOG0203|consen 636 TVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGV 715 (1019)
T ss_pred hhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCc
Confidence 169999999999999999999999999999999
Q ss_pred ccHHHHHhCCeeEEeC-CChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 002310 799 NDAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTG 877 (937)
Q Consensus 799 NDa~AL~~AdVGIamg-~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g 877 (937)
||+||||+|||||||| +|+|++|++||+||+||||++|+..+++||.+|+|+||.|.|.++.|+--|.--+..+ ++|
T Consensus 716 NDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi--~~g 793 (1019)
T KOG0203|consen 716 NDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFI--LFG 793 (1019)
T ss_pred CCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHH--HhC
Confidence 9999999999999999 9999999999999999999999999999999999999999999999985443222111 123
Q ss_pred cc--chHHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCC-ccccccccccc
Q 002310 878 TM--LTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSR-VNSNVDSHQLM 932 (937)
Q Consensus 878 ~~--l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 932 (937)
+. ++++ ..+...+- .-+..|+.|. +...+.++++++|++ ++-...||+|.
T Consensus 794 iPLplgti-tIL~IDLg--TDmvPAiSLA--YE~aEsDIM~r~PR~p~~D~LVN~rLi 846 (1019)
T KOG0203|consen 794 IPLPLGTV-TILCIDLG--TDIVPAISLA--YEKAESDIMLRPPRNPKDDKLVNKRLI 846 (1019)
T ss_pred CCcccchh-hhhhhHhh--cccchhhhHh--ccCchhhHHhcCCCCCcccccccchhH
Confidence 22 2332 22222221 2334455554 456677789999998 88888898875
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-65 Score=550.55 Aligned_cols=530 Identities=26% Similarity=0.346 Sum_probs=408.0
Q ss_pred HHHHHHHHHHH----cCCCCchhHHHHHHHHHHHHHHHHHHhcc-cCcchhhhhHHHHH-HHHHHHHHHHHHHHHHhhHH
Q 002310 280 QLILDGVKSLF----KGAPNMNTLVGLGAVSSFTVSSLAALVPK-LGWKAFFEEPIMLI-AFVLLGKNLEQRAKIKATSD 353 (937)
Q Consensus 280 ~~~~~a~~~l~----~~~~~md~Li~l~~~~a~~~s~~~~~~~~-~~~~~~f~~~~~il-~~~llg~~le~~~~~k~~~~ 353 (937)
+-++.+|+.|. -++|-| +++-++++.+.++..+.-++.. .....|+....+++ +.+++..+-|..++.|....
T Consensus 15 ~A~~~af~KL~P~~~~kNPVM-Fvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAq 93 (681)
T COG2216 15 QALKDAFKKLNPRVLVKNPVM-FVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQ 93 (681)
T ss_pred HHHHHHHHhcChHHhhhCCeE-EeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHH
Confidence 33444444442 133434 4445555555544444333322 12233443333333 33567778888887766666
Q ss_pred HHHhhcCCC-ceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCC---
Q 002310 354 MTGLLGILP-SKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPE--- 429 (937)
Q Consensus 354 l~~l~~~~p-~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g--- 429 (937)
...|++... ..+++++++ |+++.|++.+|+.||+|+|+.||.||+||.|++|.++||||.+||||-||-|+.|
T Consensus 94 AdsLr~~~~~~~A~~l~~~---g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~asVdESAITGESaPViresGgD~ 170 (681)
T COG2216 94 ADSLRKTKTETIARLLRAD---GSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVASVDESAITGESAPVIRESGGDF 170 (681)
T ss_pred HHHHHHHHHHHHHHHhcCC---CCeeeccccccccCCEEEEecCCCccCCCeEEeeeeecchhhccCCCcceeeccCCCc
Confidence 566655433 345666554 6899999999999999999999999999999999999999999999999999998
Q ss_pred CccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 002310 430 SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPT 509 (937)
Q Consensus 430 ~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~ 509 (937)
+.|-.||.+++..++++++....+|++.|++.+++.++.+|+|-+-.++-+..-++.+.++ +.++. ++.
T Consensus 171 ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~-~~~Tl----------~p~ 239 (681)
T COG2216 171 SSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLL-AVATL----------YPF 239 (681)
T ss_pred ccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHH-HHHhh----------hhH
Confidence 7799999999999999999999999999999999999999999766554433222222111 11111 111
Q ss_pred hhcc-CCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCC
Q 002310 510 AIQY-GGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTI 588 (937)
Q Consensus 510 ~~~~-~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~ 588 (937)
..+. +.+. .+...+++++. .+|...+ -..+.-=.+++.+..+.+++.+++.+.|..|.+|+++.|||||+|.
T Consensus 240 a~y~~g~~~--~i~~LiALlV~---LIPTTIG--gLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~ 312 (681)
T COG2216 240 AIYSGGGAA--SVTVLVALLVC---LIPTTIG--GLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITL 312 (681)
T ss_pred HHHcCCCCc--CHHHHHHHHHH---HhcccHH--HHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceee
Confidence 1111 2222 23345667777 7787777 4455555678999999999999999999999999999999999999
Q ss_pred CccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccC---CceEEec---
Q 002310 589 GRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVAD---GTFIEEP--- 662 (937)
Q Consensus 589 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~---~~~~~~~--- 662 (937)
|+-.-.++++. ++.+++++...+....-.-+.|..+.|++.+++.+........ .+|....
T Consensus 313 GnR~A~~f~p~-------------~gv~~~~la~aa~lsSl~DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~T 379 (681)
T COG2216 313 GNRQASEFIPV-------------PGVSEEELADAAQLASLADETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQT 379 (681)
T ss_pred cchhhhheecC-------------CCCCHHHHHHHHHHhhhccCCCCcccHHHHHHHhccCCCcccccccceeeecceec
Confidence 99999988876 6778888888888777788899999999999988755322221 1222211
Q ss_pred -CCeeEEEEcCeEEEeccHHHHHhcC----CCCc-c-hhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHH
Q 002310 663 -GSGTVAIIEDRKVSVGTIDWLRSHG----VDTS-T-FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNS 735 (937)
Q Consensus 663 -g~g~~~~i~~~~~~~G~~~~l~~~~----~~~~-~-~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~ 735 (937)
.+|+... +++++.||+.+.++++- .... . ....++-+..|.+.+.+..|++++|++.+.|-+||+.+|-..+
T Consensus 380 RmSGvd~~-~~~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~~~~GVI~LkDivK~Gi~ERf~e 458 (681)
T COG2216 380 RMSGVDLP-GGREIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAE 458 (681)
T ss_pred ccccccCC-CCceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECCEEEEEEEehhhcchhHHHHHHH
Confidence 1222211 23789999998876542 2121 1 2223445677899999999999999999999999999999999
Q ss_pred HHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCC
Q 002310 736 LSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGG 815 (937)
Q Consensus 736 L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~ 815 (937)
||++|||.+|+||||+.||.+||++.|++ ++.|+++||||.++|+.-|.+|+.|+|+|||.||+|||++||||+||.+
T Consensus 459 lR~MgIkTvM~TGDN~~TAa~IA~EAGVD--dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNs 536 (681)
T COG2216 459 LRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNS 536 (681)
T ss_pred HHhcCCeEEEEeCCCHHHHHHHHHHhCch--hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhcc
Confidence 99999999999999999999999999998 8999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHhhcCEEEeCCChhHHHHHHHHHHHHH
Q 002310 816 GVGAASEVASVVLMGNRLSQLLVALELSRLTM 847 (937)
Q Consensus 816 gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~ 847 (937)
|+++|||++..|=+|.|..++.+.+++|++..
T Consensus 537 GTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 537 GTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred ccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 99999999999999999999999999999864
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-64 Score=578.94 Aligned_cols=570 Identities=18% Similarity=0.227 Sum_probs=417.7
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcC-CCEEee
Q 002310 323 KAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLP-GDRIPA 401 (937)
Q Consensus 323 ~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~-Ge~IPa 401 (937)
+.|+..++.++++.+.+..+..+..++.+..++++... +..++|+|+ |.+++|.++||+||||+.+.+ +-..||
T Consensus 211 d~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R~----g~~~ti~S~eLVPGDil~i~~~~~~~Pc 285 (1140)
T KOG0208|consen 211 DSYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIRD----GFWETVDSSELVPGDILYIPPPGKIMPC 285 (1140)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEEC----CEEEEEeccccccccEEEECCCCeEeec
Confidence 45666667777777777788888888888888877654 467888887 589999999999999999998 999999
Q ss_pred eEEEeecceeeeeccccCCCcccccCCC-------------------Cccccceeeec------ceEEEEEEecCCccHH
Q 002310 402 DGVVRAGRSTVDESSFTGEPLPVTKIPE-------------------SEVAAGSINLN------GTLTVEVRRPGGETAM 456 (937)
Q Consensus 402 Dgvll~G~~~VDeS~LTGEs~pv~K~~g-------------------~~v~aGt~~~~------G~~~~~V~~~G~~T~~ 456 (937)
|++|++|+|.||||+|||||.|+.|.+- +.+|.||.+++ +.+.+.|++||.+|..
T Consensus 286 Da~Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~K 365 (1140)
T KOG0208|consen 286 DALLISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTK 365 (1140)
T ss_pred ceEEEeCcEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccc
Confidence 9999999999999999999999999874 24789998874 6899999999999999
Q ss_pred HHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccc
Q 002310 457 GDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICC 536 (937)
Q Consensus 457 ~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~P 536 (937)
|++++.+..++.....+.+...++... +.+++++.|++..+. ....|.++...+.+++-++.+ .+|
T Consensus 366 GqLVRsilyPkP~~fkfyrds~~fi~~----l~~ia~~gfiy~~i~-------l~~~g~~~~~iiirsLDliTi---~VP 431 (1140)
T KOG0208|consen 366 GQLVRSILYPKPVNFKFYRDSFKFILF----LVIIALIGFIYTAIV-------LNLLGVPLKTIIIRSLDLITI---VVP 431 (1140)
T ss_pred cHHHHhhcCCCCcccHHHHHHHHHHHH----HHHHHHHHHHHHhHh-------HHHcCCCHHHHhhhhhcEEEE---ecC
Confidence 999999999887766666665554332 333333333332211 122456778889999999999 999
Q ss_pred cccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCC-------
Q 002310 537 CLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQ------- 609 (937)
Q Consensus 537 cal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~------- 609 (937)
.||+ -+..+....+.+|+.|+||.+-+++.+...|++|++|||||||||++.+.+..+.+.....+.....
T Consensus 432 PALP--AaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~ 509 (1140)
T KOG0208|consen 432 PALP--AALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDS 509 (1140)
T ss_pred CCch--hhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhh
Confidence 9999 9999999999999999999999999999999999999999999999999999988753221111000
Q ss_pred -------CCCCCCCH-HHHHHHHHhcccC---------CCCChHHHHHHHHHh---------------cCCcc--ccccC
Q 002310 610 -------NPIHPLSE-TEILKFAAGVESN---------TVHPIGKAIVEAAEF---------------SNCQN--VKVAD 655 (937)
Q Consensus 610 -------~~~~~~~~-~~ll~~aa~~e~~---------s~hP~~~Ai~~~a~~---------------~~~~~--~~~~~ 655 (937)
........ ..+. ++.+.++ ..+|++..+.+.... ..... .++..
T Consensus 510 ~~~~~~l~~~~~~~~~~~~~--~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~ 587 (1140)
T KOG0208|consen 510 LQLFYKLSLRSSSLPMGNLV--AAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPE 587 (1140)
T ss_pred ccceeeccccccCCchHHHH--HHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCc
Confidence 00000001 1111 1112222 245665544332211 00000 00100
Q ss_pred C---ceEE-----------ec----CCeeEEEEc-C-----eEEEeccHHHHHhcCCCCc---ch-hhHHHHHhCCCeEE
Q 002310 656 G---TFIE-----------EP----GSGTVAIIE-D-----RKVSVGTIDWLRSHGVDTS---TF-QEVEMEDLMNQSLV 707 (937)
Q Consensus 656 ~---~~~~-----------~~----g~g~~~~i~-~-----~~~~~G~~~~l~~~~~~~~---~~-~~~~~~~~~~~~~~ 707 (937)
. ...+ .+ =+.+...+. + ..|.||+||.+.+.|.+.. ++ +..+.+..+|.+++
T Consensus 588 ~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~dy~evl~~Yt~~GfRVI 667 (1140)
T KOG0208|consen 588 NAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPADYQEVLKEYTHQGFRVI 667 (1140)
T ss_pred ccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCccHHHHHHHHHhCCeEEE
Confidence 0 0000 00 011122221 1 2389999999999997643 22 33455778899888
Q ss_pred EEEE---------------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc
Q 002310 708 YVGV---------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD 766 (937)
Q Consensus 708 ~v~~---------------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~ 766 (937)
.++. |.+|+|++.||++||++++.+|++|++++||++|+||||..||..+||+||+.+.
T Consensus 668 AlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p 747 (1140)
T KOG0208|consen 668 ALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEP 747 (1140)
T ss_pred EEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCC
Confidence 8764 6789999999999999999999999999999999999999999999999998210
Q ss_pred --------------------------------------------------------------------------------
Q 002310 767 -------------------------------------------------------------------------------- 766 (937)
Q Consensus 767 -------------------------------------------------------------------------------- 766 (937)
T Consensus 748 ~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il 827 (1140)
T KOG0208|consen 748 QVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKIL 827 (1140)
T ss_pred CCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHH
Confidence
Q ss_pred ---eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002310 767 ---KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 767 ---~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~ 843 (937)
.|||||+|+||.++|+.||+.|++|+|||||+||+.|||+|||||+++++ .|.-+|.+.-.-.+++.++++|++|
T Consensus 828 ~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea--EASvAApFTSk~~~I~cVp~vIrEG 905 (1140)
T KOG0208|consen 828 LKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA--EASVAAPFTSKTPSISCVPDVIREG 905 (1140)
T ss_pred hcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh--hHhhcCccccCCCchhhHhHHHhhh
Confidence 69999999999999999999999999999999999999999999999633 3455678777667999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCCcc
Q 002310 844 RLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVN 923 (937)
Q Consensus 844 R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~~ 923 (937)
|..+-.-..-+.|...|-++.....+ ++|. .+..++-. ..+..--++.+.-|+.|. ++.+.+...+++||.++-
T Consensus 906 RaALVTSf~~FkYMalYs~iqFisv~-~LY~-~~~nl~D~---Qfl~iDLlii~pia~~m~-~~~a~~~L~~~rP~~~L~ 979 (1140)
T KOG0208|consen 906 RAALVTSFACFKYMALYSAIQFISVV-FLYL-INSNLGDL---QFLFIDLLIITPIAVMMS-RFDASDKLFPKRPPTNLL 979 (1140)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHhhh-eeee-ecccccch---hhhhhHHHHHHHHHHHHc-cCcHHHHhcCCCCCcccc
Confidence 99999888888899999887654333 2332 22223322 222222223333344454 446666667888888753
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-63 Score=621.21 Aligned_cols=626 Identities=17% Similarity=0.122 Sum_probs=428.8
Q ss_pred hccHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 002310 276 GPGFQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMT 355 (937)
Q Consensus 276 ~~g~~~~~~a~~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~ 355 (937)
|..|.|++..+..+++|..|+.+|+..-+.....+| ..++..++.+.++++++..+++.+|++.++|+++..+
T Consensus 97 Yt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s-------~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N 169 (1178)
T PLN03190 97 YSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLA-------VFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIEN 169 (1178)
T ss_pred cccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcc-------cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhc
Confidence 445788889999999999999999533322111111 1123445667788888889999999999999998765
Q ss_pred HhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEee-----cceeeeeccccCCCcccccCCCC
Q 002310 356 GLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA-----GRSTVDESSFTGEPLPVTKIPES 430 (937)
Q Consensus 356 ~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~-----G~~~VDeS~LTGEs~pv~K~~g~ 430 (937)
++.++++++ |.++++++++|+|||+|.|++||+||||++|++ |.++||||+|||||.|+.|.+++
T Consensus 170 ------~~~~~v~~~----~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 170 ------NRLAWVLVD----DQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred ------CcEEEEEEC----CeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 467888876 578999999999999999999999999999997 88999999999999999997652
Q ss_pred c---------------------------------------------cccceeeecc-eEEEEEEecCCccHHHHHHHHHH
Q 002310 431 E---------------------------------------------VAAGSINLNG-TLTVEVRRPGGETAMGDIVRLVE 464 (937)
Q Consensus 431 ~---------------------------------------------v~aGt~~~~G-~~~~~V~~~G~~T~~~~i~~~v~ 464 (937)
. ++.|+.+.+. .+.+.|++||.+|. ++....
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK---~~~N~~ 316 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETK---AMLNNS 316 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhh---HhhcCC
Confidence 1 2223333332 68999999999995 444444
Q ss_pred HhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cc-cccchhcc--------CC-----cH-HHHHHHHHH
Q 002310 465 EAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFG---AH-VLPTAIQY--------GG-----PV-SLALQLSCS 526 (937)
Q Consensus 465 ~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~---~~-~~~~~~~~--------~~-----~~-~~~l~~ai~ 526 (937)
.+..+.+++++.++++..+++.+.++++++++++...+. .. .+...++. .. .+ ...+..++.
T Consensus 317 ~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 396 (1178)
T PLN03190 317 GAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLM 396 (1178)
T ss_pred CCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHH
Confidence 556788999999999988877777777766655432211 10 00000110 00 01 122333444
Q ss_pred HHhhcccccccccchhhHHHHHHHHHHHhhhcC----------cEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEE
Q 002310 527 VLRKETSICCCLSMCPWLSHAYSYVGTSLGATR----------GLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKV 596 (937)
Q Consensus 527 vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~----------gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i 596 (937)
.+++++..+|..|. +.+.+........+.++ ++.+|+.+.+|+||+|++||+|||||||+|+|+++++
T Consensus 397 ~lil~~~~IPISL~--Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~ 474 (1178)
T PLN03190 397 SVIVFQIMIPISLY--ISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCA 474 (1178)
T ss_pred HHHHHHhhcceeee--eeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEE
Confidence 44455558999998 77777775534444332 3789999999999999999999999999999999999
Q ss_pred EecCCcCCCCCC----------------C-CCCC--------------CCC-H-----HHHHH-HHHh--c-----c---
Q 002310 597 VTSGSLTDPNSK----------------Q-NPIH--------------PLS-E-----TEILK-FAAG--V-----E--- 628 (937)
Q Consensus 597 ~~~~~~~~~~~~----------------~-~~~~--------------~~~-~-----~~ll~-~aa~--~-----e--- 628 (937)
...+..|+.... . .+.. +.+ + .+++. ++-+ + +
T Consensus 475 ~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~ 554 (1178)
T PLN03190 475 SIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTS 554 (1178)
T ss_pred EECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCC
Confidence 987655532110 0 0000 000 0 11222 2221 1 1
Q ss_pred --------cCCCCChHHHHHHHHHhcCCccccccCCc-----------e------EEec-CCeeEEEEc---C--eEEEe
Q 002310 629 --------SNTVHPIGKAIVEAAEFSNCQNVKVADGT-----------F------IEEP-GSGTVAIIE---D--RKVSV 677 (937)
Q Consensus 629 --------~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~-----------~------~~~~-g~g~~~~i~---~--~~~~~ 677 (937)
..+.+|.+.|++++|+..|+.....+... + ...+ .+.+...++ + ..++|
T Consensus 555 ~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~K 634 (1178)
T PLN03190 555 DPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVK 634 (1178)
T ss_pred CccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEe
Confidence 22348999999999999887432221111 1 0111 122222332 2 24789
Q ss_pred ccHHHHHhcCCCCcc-------hhhHHHHHhCCCeEEEE--------------------------------------EEC
Q 002310 678 GTIDWLRSHGVDTST-------FQEVEMEDLMNQSLVYV--------------------------------------GVD 712 (937)
Q Consensus 678 G~~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~v--------------------------------------~~~ 712 (937)
|+++.+.+.|..... .+..++.+.+|.+++.+ +.|
T Consensus 635 GA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~d 714 (1178)
T PLN03190 635 GADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENN 714 (1178)
T ss_pred cCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcC
Confidence 999999988753211 11223345556655543 347
Q ss_pred CEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---------------------------
Q 002310 713 NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--------------------------- 765 (937)
Q Consensus 713 ~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--------------------------- 765 (937)
++++|+++++|++|++++++|+.|+++||+|||+|||+.+||.+||++|||.+
T Consensus 715 L~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~ 794 (1178)
T PLN03190 715 LTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMS 794 (1178)
T ss_pred cEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhh
Confidence 78999999999999999999999999999999999999999999999888710
Q ss_pred -------------------------------------c----------------eeEeccChhhHHHHHHHHhcC-CCEE
Q 002310 766 -------------------------------------D----------------KVLSGVKPNEKKRFINELQND-ENVV 791 (937)
Q Consensus 766 -------------------------------------~----------------~v~ar~~Pe~K~~iV~~Lq~~-G~~V 791 (937)
+ .||||++|+||+++|+.+|+. +++|
T Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vt 874 (1178)
T PLN03190 795 KKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMT 874 (1178)
T ss_pred hhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEE
Confidence 0 279999999999999999997 5799
Q ss_pred EEEcCCcccHHHHHhCCeeEEe-C-CChHHHHhhcCEEEeCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 792 AMVGDGINDAAALASSHIGVAM-G-GGVGAASEVASVVLMGNRLSQLLVALE-LSRLTMKTVKQNLWWAFGYNIVGIPIA 868 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVGIam-g-~gt~~a~~aADivL~~~~l~~l~~~i~-~~R~~~~~i~~nl~~a~~~Nii~i~la 868 (937)
+|||||+||+|||++|||||++ | +|. .|..+||+.+. .|+.|.+++. .||..|+++.+-+.|.|..|++.+..-
T Consensus 875 laIGDGaNDv~mIq~AdVGIGIsG~EG~-qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~q 951 (1178)
T PLN03190 875 LAIGDGANDVSMIQMADVGVGISGQEGR-QAVMASDFAMG--QFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVL 951 (1178)
T ss_pred EEECCCcchHHHHHhcCeeeeecCchhH-HHHHhhccchh--hhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987 3 344 56679999995 6888998888 499999999999999999998755432
Q ss_pred hhhhhccccccchHHHHH-HHhhhhHHHHHHHHhhhccccccccccccCCCCCCcccccc
Q 002310 869 AGVLLPVTGTMLTPSIAG-ALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVD 927 (937)
Q Consensus 869 ~~~~~~~~g~~l~P~~a~-~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~ 927 (937)
+ ++-.+.|+--+|++-. .++..+.+...+.-+.+......-+......-|+-++.|..
T Consensus 952 f-~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~ 1010 (1178)
T PLN03190 952 F-WYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQR 1010 (1178)
T ss_pred H-HHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhcc
Confidence 2 1111233333444433 33333444444443333222222222234444555555444
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-64 Score=555.28 Aligned_cols=500 Identities=23% Similarity=0.266 Sum_probs=395.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecc
Q 002310 330 IMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR 409 (937)
Q Consensus 330 ~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~ 409 (937)
..++.+++++.-+...+++++.+....|+..+..++.|+|| |+|.++++.+||||||+.++.|++||||++|++|+
T Consensus 101 ~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRD----Gkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD 176 (942)
T KOG0205|consen 101 VGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRD----GKWSEQEASILVPGDILSIKLGDIIPADARLLEGD 176 (942)
T ss_pred hhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeec----CeeeeeeccccccCceeeeccCCEecCccceecCC
Confidence 34555566666555555667777888888888889999998 69999999999999999999999999999999998
Q ss_pred -eeeeeccccCCCcccccCCCCccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH
Q 002310 410 -STVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGV 488 (937)
Q Consensus 410 -~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~v 488 (937)
..||+|.|||||.|+.|.+||.+|+||.+.+|++.++|++||.+|++||-..++.. -.....+|+-++.+..+....+
T Consensus 177 ~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si 255 (942)
T KOG0205|consen 177 PLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSI 255 (942)
T ss_pred ccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999987 5566789999988876654333
Q ss_pred HHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchH
Q 002310 489 IALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNI 568 (937)
Q Consensus 489 l~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~ 568 (937)
.+--++.+++.+.... ..+.....-+.++++ ..+|.+++ -.+.+.++++..+++++|.++|...+
T Consensus 256 ~~g~lie~~vmy~~q~-----------R~~r~~i~nLlvllI--GgiPiamP--tVlsvTMAiGs~rLaqqgAItkrmtA 320 (942)
T KOG0205|consen 256 ALGMLIEITVMYPIQH-----------RLYRDGIDNLLVLLI--GGIPIAMP--TVLSVTMAIGSHRLSQQGAITKRMTA 320 (942)
T ss_pred HHHHHHHHHhhhhhhh-----------hhhhhhhhheheeee--cccccccc--eeeeehhhHHHHHHHhcccHHHHHHH
Confidence 2222222222111111 122333334455555 23888887 77777888999999999999999999
Q ss_pred HhhcccccEEEEeCCCccCCCccEEEE--EEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcc-cCCCCChHHHHHHHHHh
Q 002310 569 LEKFAMVNTVVFDKTGTLTIGRPVVTK--VVTSGSLTDPNSKQNPIHPLSETEILKFAAGVE-SNTVHPIGKAIVEAAEF 645 (937)
Q Consensus 569 lE~lg~v~~i~fDKTGTLT~~~~~v~~--i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e-~~s~hP~~~Ai~~~a~~ 645 (937)
+|+|+.+|++|+|||||||.|+++|.+ +..+ .++.++++++-.|+... ....+.+++|++...++
T Consensus 321 IEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~------------v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~d 388 (942)
T KOG0205|consen 321 IEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF------------VKGVDKDDVLLTAARASRKENQDAIDAAIVGMLAD 388 (942)
T ss_pred HHHhhCceEEeecCcCceeecceecCcCcceee------------ecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcC
Confidence 999999999999999999999999988 4222 15566777766655443 34567888999887654
Q ss_pred cCCccccccCCceEEecC----CeeEEEE-c--C--eEEEeccHHHHHhcCCCCcchh-----hHHHHHhCCCeEEEEEE
Q 002310 646 SNCQNVKVADGTFIEEPG----SGTVAII-E--D--RKVSVGTIDWLRSHGVDTSTFQ-----EVEMEDLMNQSLVYVGV 711 (937)
Q Consensus 646 ~~~~~~~~~~~~~~~~~g----~g~~~~i-~--~--~~~~~G~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~v~~ 711 (937)
-... ...-..++..|. +.+..++ + | .++.||+|+++.+.|....+.. .+.+....|.+.+.+++
T Consensus 389 PKea--ra~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVAr 466 (942)
T KOG0205|consen 389 PKEA--RAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVAR 466 (942)
T ss_pred HHHH--hhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhh
Confidence 1000 000011222221 2233333 2 2 3488999999998876543322 23345566766666664
Q ss_pred C-------------CEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-------------
Q 002310 712 D-------------NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK------------- 765 (937)
Q Consensus 712 ~-------------~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~------------- 765 (937)
. -+++|+.-+-||+|.|..++|.+-...|++|.|+|||....++..++++|+-.
T Consensus 467 q~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~ 546 (942)
T KOG0205|consen 467 QEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGK 546 (942)
T ss_pred hccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCC
Confidence 2 27999999999999999999999999999999999999999999999999721
Q ss_pred ---------------ceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeC
Q 002310 766 ---------------DKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMG 830 (937)
Q Consensus 766 ---------------~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~ 830 (937)
.+=||.+.||+|.++|+.||++|+.|+|+|||+||+||||.||+||++..++|+|+.++||||+.
T Consensus 547 ~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVlte 626 (942)
T KOG0205|consen 547 DGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626 (942)
T ss_pred CCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcC
Confidence 25689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 831 NRLSQLLVALELSRLTMKTVKQNLWWAFGYNIV 863 (937)
Q Consensus 831 ~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii 863 (937)
..++.+..++..||.+|++++..-.|++...+-
T Consensus 627 pglSviI~avltSraIfqrmknytiyavsitir 659 (942)
T KOG0205|consen 627 PGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 659 (942)
T ss_pred CCchhhHHHHHHHHHHHHHHhhheeeeehhHHH
Confidence 999999999999999999999988888775543
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-54 Score=479.87 Aligned_cols=497 Identities=20% Similarity=0.226 Sum_probs=362.5
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeee
Q 002310 323 KAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPAD 402 (937)
Q Consensus 323 ~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaD 402 (937)
..|+.+.++++++.++.+.+|+..|++-++..++ +.-+++.+++ ....|+++|++||+|.+..+++||||
T Consensus 129 ~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Ns------e~y~~ltr~~----~~~~~Ss~i~vGDvi~v~K~~RVPAD 198 (1051)
T KOG0210|consen 129 STYWGPLGFVLTITLIKEAVDDLKRRRRDRELNS------EKYTKLTRDG----TRREPSSDIKVGDVIIVHKDERVPAD 198 (1051)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhheeeccCC----cccccccccccccEEEEecCCcCCcc
Confidence 5677788889999999999999999887776653 2333443332 33349999999999999999999999
Q ss_pred EEEe-----ecceeeeeccccCCCcccccCC-----------------------------------------------CC
Q 002310 403 GVVR-----AGRSTVDESSFTGEPLPVTKIP-----------------------------------------------ES 430 (937)
Q Consensus 403 gvll-----~G~~~VDeS~LTGEs~pv~K~~-----------------------------------------------g~ 430 (937)
.+++ +|+++|-+-.|+||++.+.|.| ++
T Consensus 199 milLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~Lsven 278 (1051)
T KOG0210|consen 199 MILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVEN 278 (1051)
T ss_pred eEEEEccCCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccc
Confidence 9998 5889999999999999877744 23
Q ss_pred ccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccch
Q 002310 431 EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTA 510 (937)
Q Consensus 431 ~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~ 510 (937)
.++++|++.+|.+.+.|++||.+|+- +.+...++.+-..++..+|.+.+++...+++++++....- +
T Consensus 279 tLWanTVvAs~t~~gvVvYTG~dtRs---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~---g------- 345 (1051)
T KOG0210|consen 279 TLWANTVVASGTAIGVVVYTGRDTRS---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMK---G------- 345 (1051)
T ss_pred eeeeeeeEecCcEEEEEEEecccHHH---HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhh---c-------
Confidence 57899999999999999999999943 2223334455566777888888888777777776554331 1
Q ss_pred hccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhc----CcEEEcCchHHhhcccccEEEEeCCCcc
Q 002310 511 IQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGAT----RGLLLRGGNILEKFAMVNTVVFDKTGTL 586 (937)
Q Consensus 511 ~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~----~gilvk~~~~lE~lg~v~~i~fDKTGTL 586 (937)
.+.+|...+.+++.++.. .+|..|- .-+-++-.+......+ .|.++|+.+..|+||++.++.+||||||
T Consensus 346 --~~~~wyi~~~RfllLFS~---IIPISLR--vnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTL 418 (1051)
T KOG0210|consen 346 --FGSDWYIYIIRFLLLFSS---IIPISLR--VNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTL 418 (1051)
T ss_pred --CCCchHHHHHHHHHHHhh---hceeEEE--EehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCcc
Confidence 134667777776666555 8888777 6666665544444432 3899999999999999999999999999
Q ss_pred CCCccEEEEEEecCCcCCCCC-------------C--CCC-------CCCCC---HHHHHHHHHhc------------cc
Q 002310 587 TIGRPVVTKVVTSGSLTDPNS-------------K--QNP-------IHPLS---ETEILKFAAGV------------ES 629 (937)
Q Consensus 587 T~~~~~v~~i~~~~~~~~~~~-------------~--~~~-------~~~~~---~~~ll~~aa~~------------e~ 629 (937)
|+|+|.+++++.+...|..+. + .+. ..+.+ .+.++.++-+. ..
T Consensus 419 TqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sY 498 (1051)
T KOG0210|consen 419 TQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSY 498 (1051)
T ss_pred ccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEe
Confidence 999999999997654443220 0 000 00111 12233343332 23
Q ss_pred CCCCChHHHHHHHHHhcCCccccccCCc------------e--------EE-ecCCeeEEEEc--Ce--EEEeccHHHHH
Q 002310 630 NTVHPIGKAIVEAAEFSNCQNVKVADGT------------F--------IE-EPGSGTVAIIE--DR--KVSVGTIDWLR 684 (937)
Q Consensus 630 ~s~hP~~~Ai~~~a~~~~~~~~~~~~~~------------~--------~~-~~g~g~~~~i~--~~--~~~~G~~~~l~ 684 (937)
+..+|.+.||+++.+..|......+... + .. ....|+....+ ++ -+.||+.-.|.
T Consensus 499 QAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs 578 (1051)
T KOG0210|consen 499 QAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMS 578 (1051)
T ss_pred ecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHh
Confidence 4567999999998877666543222111 1 11 12346655544 22 27899886554
Q ss_pred hcCCCCcc--hhhHHHHHhCCCeEEEEE---------------------------------------ECCEEEEEEEecC
Q 002310 685 SHGVDTST--FQEVEMEDLMNQSLVYVG---------------------------------------VDNMLAGLIYVED 723 (937)
Q Consensus 685 ~~~~~~~~--~~~~~~~~~~~~~~~~v~---------------------------------------~~~~~lG~i~l~D 723 (937)
..- .+.+ .++..+.+.+|.+.+.++ .|++++|+.++||
T Consensus 579 ~iV-q~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVED 657 (1051)
T KOG0210|consen 579 GIV-QYNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVED 657 (1051)
T ss_pred ccc-ccchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHH
Confidence 321 1111 122223334444444444 4778999999999
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--------------------------------------
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-------------------------------------- 765 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~-------------------------------------- 765 (937)
++++|++.+++.||++||||||+|||+.+||..||+..++..
T Consensus 658 kLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~S 737 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGES 737 (1051)
T ss_pred HHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCch
Confidence 999999999999999999999999999999999999999821
Q ss_pred --------------------ceeEeccChhhHHHHHHHHhcC-CCEEEEEcCCcccHHHHHhCCeeEEe-CCChHHHHhh
Q 002310 766 --------------------DKVLSGVKPNEKKRFINELQND-ENVVAMVGDGINDAAALASSHIGVAM-GGGVGAASEV 823 (937)
Q Consensus 766 --------------------~~v~ar~~Pe~K~~iV~~Lq~~-G~~VamvGDG~NDa~AL~~AdVGIam-g~gt~~a~~a 823 (937)
..|+||++|+||+++++.+|+. |+.|++||||.||+.|+++|||||++ |.....|.-+
T Consensus 738 l~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLA 817 (1051)
T KOG0210|consen 738 LEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLA 817 (1051)
T ss_pred HHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchh
Confidence 1689999999999999999885 88999999999999999999999999 5433445668
Q ss_pred cCEEEeCCChhHHHHHHHH-HHHHHHHHHH
Q 002310 824 ASVVLMGNRLSQLLVALEL-SRLTMKTVKQ 852 (937)
Q Consensus 824 ADivL~~~~l~~l~~~i~~-~R~~~~~i~~ 852 (937)
||+.+. .|+.+-+++.+ ||+.|++--+
T Consensus 818 ADfSIt--qF~Hv~rLLl~HGR~SYkrsa~ 845 (1051)
T KOG0210|consen 818 ADFSIT--QFSHVSRLLLWHGRNSYKRSAK 845 (1051)
T ss_pred ccccHH--HHHHHHHHhhccccchHHHHHH
Confidence 999986 59999999888 9999887544
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-51 Score=461.38 Aligned_cols=462 Identities=21% Similarity=0.223 Sum_probs=327.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcC---CCEEeeeEEE
Q 002310 329 PIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLP---GDRIPADGVV 405 (937)
Q Consensus 329 ~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~---Ge~IPaDgvl 405 (937)
..+-++++..-+.--.+++.|+.+.++++ ...|..+.|+|+ ++|+.+..+||.|||+|.|.. ...||||.++
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~M-g~kpy~I~v~R~----kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllL 294 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRTM-GNKPYTINVYRN----KKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLL 294 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEEEec----CcceeccccccCCCceEEeccCcccCcCCceEEE
Confidence 33333333444444456677777777765 446788899987 489999999999999999977 5689999999
Q ss_pred eecceeeeeccccCCCcccccCC-----------------CCccccceeee-------------cceEEEEEEecCCccH
Q 002310 406 RAGRSTVDESSFTGEPLPVTKIP-----------------ESEVAAGSINL-------------NGTLTVEVRRPGGETA 455 (937)
Q Consensus 406 l~G~~~VDeS~LTGEs~pv~K~~-----------------g~~v~aGt~~~-------------~G~~~~~V~~~G~~T~ 455 (937)
+.|+|.|||+||||||.|..|.+ ...+|+||.++ +|-+.+.|.+||.+|.
T Consensus 295 L~GsciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTS 374 (1160)
T KOG0209|consen 295 LRGSCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETS 374 (1160)
T ss_pred EecceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEecccccc
Confidence 99999999999999999999976 12479999886 5789999999999999
Q ss_pred HHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccC-CcHHHHHHHHHHHHhhcccc
Q 002310 456 MGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYG-GPVSLALQLSCSVLRKETSI 534 (937)
Q Consensus 456 ~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~-~~~~~~l~~ai~vlvv~~~~ 534 (937)
.|+++|.+....++-+.-.+ -+.+|..+.+++|++...+.|.-+.. .+ ..-++-+.-++ .+.+..
T Consensus 375 QGkLvRtilf~aervTaNn~----Etf~FILFLlVFAiaAa~Yvwv~Gsk-------d~~RsrYKL~LeC~---LIlTSV 440 (1160)
T KOG0209|consen 375 QGKLVRTILFSAERVTANNR----ETFIFILFLLVFAIAAAGYVWVEGSK-------DPTRSRYKLFLECT---LILTSV 440 (1160)
T ss_pred CCceeeeEEecceeeeeccH----HHHHHHHHHHHHHHHhhheEEEeccc-------Ccchhhhheeeeee---EEEecc
Confidence 99999988765544443222 22334333333333322111111110 01 00111111122 223347
Q ss_pred cccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCC
Q 002310 535 CCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHP 614 (937)
Q Consensus 535 ~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~ 614 (937)
+|.-|+ +-..+++-.++..++|.|+.+..+-.+--.|++|+.|||||||||+..|.|..+.-....... ..+...
T Consensus 441 vPpELP--mELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~---~~~~s~ 515 (1160)
T KOG0209|consen 441 VPPELP--MELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGA---LTPASK 515 (1160)
T ss_pred CCCCCc--hhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCccc---ccchhh
Confidence 888888 888899999999999999999999999999999999999999999999999998643221111 111112
Q ss_pred CCHHHHHHHHHh--c---c-cCCCCChHHHHHHHHHhcCCccc--cccCCc---eEEec---------CCeeEEEEcC--
Q 002310 615 LSETEILKFAAG--V---E-SNTVHPIGKAIVEAAEFSNCQNV--KVADGT---FIEEP---------GSGTVAIIED-- 672 (937)
Q Consensus 615 ~~~~~ll~~aa~--~---e-~~s~hP~~~Ai~~~a~~~~~~~~--~~~~~~---~~~~~---------g~g~~~~i~~-- 672 (937)
...+.++.+|.+ + | .-..+|+++|.+++....-.... ..+..+ +..+. ...+.+..++
T Consensus 516 ~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g 595 (1160)
T KOG0209|consen 516 APNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPG 595 (1160)
T ss_pred CCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCC
Confidence 222334444433 2 2 34579999999998743211000 000010 10000 1111222221
Q ss_pred -----eEEEeccHHHHHhcCCCCc-chhh-HHHHHhCCCeEEEEEE---------------------CCEEEEEEEecCc
Q 002310 673 -----RKVSVGTIDWLRSHGVDTS-TFQE-VEMEDLMNQSLVYVGV---------------------DNMLAGLIYVEDR 724 (937)
Q Consensus 673 -----~~~~~G~~~~l~~~~~~~~-~~~~-~~~~~~~~~~~~~v~~---------------------~~~~lG~i~l~D~ 724 (937)
-.-.||+||.++++-.+.+ ..++ ..++..+|.+++.+++ |++|.|++.|.-|
T Consensus 596 ~s~k~~~aVKGAPEvi~~ml~dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CP 675 (1160)
T KOG0209|consen 596 SSEKYFVAVKGAPEVIQEMLRDVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCP 675 (1160)
T ss_pred CceEEEEEecCCHHHHHHHHHhCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCC
Confidence 1257899999987644432 2222 4567778888877653 6789999999999
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---------------------------------------
Q 002310 725 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--------------------------------------- 765 (937)
Q Consensus 725 lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--------------------------------------- 765 (937)
+|+|++++|+.|++.+++++|+||||+.||.++|+++||..
T Consensus 676 lK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l 755 (1160)
T KOG0209|consen 676 LKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLL 755 (1160)
T ss_pred CCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhh
Confidence 99999999999999999999999999999999999999821
Q ss_pred ----------------------------ceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeC
Q 002310 766 ----------------------------DKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG 814 (937)
Q Consensus 766 ----------------------------~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg 814 (937)
..||||+.|.||..+|..|++.|+.++|||||+||+.|||+||||||+-
T Consensus 756 ~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL 832 (1160)
T KOG0209|consen 756 AETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL 832 (1160)
T ss_pred hhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh
Confidence 0699999999999999999999999999999999999999999999984
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-50 Score=487.86 Aligned_cols=566 Identities=16% Similarity=0.141 Sum_probs=407.0
Q ss_pred hccHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 002310 276 GPGFQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMT 355 (937)
Q Consensus 276 ~~g~~~~~~a~~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~ 355 (937)
|..+.|+++.+..+++|..|.++|+..-....- +| ..++.....+.++++....+...+|++.|++.++.++
T Consensus 42 Yt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~-------~~~~~~~~~pl~~vl~~t~iKd~~eD~rR~~~D~~iN 113 (1151)
T KOG0206|consen 42 YTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS-------PFNPYTTLVPLLFVLGITAIKDAIEDYRRHKQDKEVN 113 (1151)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc-------ccCccceeeceeeeehHHHHHHHHhhhhhhhccHHhh
Confidence 334577888888888988999999654333221 22 1122334445667777788999999999999999887
Q ss_pred HhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEee-----cceeeeeccccCCCcccccCCC-
Q 002310 356 GLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA-----GRSTVDESSFTGEPLPVTKIPE- 429 (937)
Q Consensus 356 ~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~-----G~~~VDeS~LTGEs~pv~K~~g- 429 (937)
+ .++.|.++++ .+++..+++|++||+|.+..+|.+|||.++++ |.|+|++++|+||++.+.|+.-
T Consensus 114 ~------~~~~v~~~~~---~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l~ 184 (1151)
T KOG0206|consen 114 N------RKVEVLRGDG---CFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQALE 184 (1151)
T ss_pred c------ceeEEecCCc---eeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceeeehh
Confidence 4 5778876532 38999999999999999999999999999994 6699999999999999887540
Q ss_pred ----------------------------------------------Cccccceeeecc-eEEEEEEecCCccHHHHHHHH
Q 002310 430 ----------------------------------------------SEVAAGSINLNG-TLTVEVRRPGGETAMGDIVRL 462 (937)
Q Consensus 430 ----------------------------------------------~~v~aGt~~~~G-~~~~~V~~~G~~T~~~~i~~~ 462 (937)
+.++.|+.+.+. .+.+.|+.+|++|.+ +..
T Consensus 185 ~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~---~~n 261 (1151)
T KOG0206|consen 185 CTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKL---MQN 261 (1151)
T ss_pred hhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchH---HHh
Confidence 113456666664 678899999999955 445
Q ss_pred HHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cccchhcc-CC-cHHHHHHHHHHHHhhccccccc
Q 002310 463 VEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAH---VLPTAIQY-GG-PVSLALQLSCSVLRKETSICCC 537 (937)
Q Consensus 463 v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~---~~~~~~~~-~~-~~~~~l~~ai~vlvv~~~~~Pc 537 (937)
...+..+++++++..++....++.+.+.++++..+...+.... ..+..++. .. +...++...++.++.++..+|.
T Consensus 262 ~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~liPI 341 (1151)
T KOG0206|consen 262 SGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLIPI 341 (1151)
T ss_pred cCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceEEE
Confidence 5568889999999999988777777776666655543322211 11111111 11 2345566667777777779998
Q ss_pred ccchhhHHHHHHHHHHHhh----------hcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCC
Q 002310 538 LSMCPWLSHAYSYVGTSLG----------ATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNS 607 (937)
Q Consensus 538 al~~pla~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~ 607 (937)
.|. ..+.+.-....... .......|+.+..|+||+|++|++|||||||+|.|++.+|.+.+..|+...
T Consensus 342 SLy--vsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 342 SLY--VSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEE--EEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 887 55555443333222 245788999999999999999999999999999999999999988776542
Q ss_pred CCC------------------C----------------CCCCCHHHHHHHHH---h-----------cccCCCCChHHHH
Q 002310 608 KQN------------------P----------------IHPLSETEILKFAA---G-----------VESNTVHPIGKAI 639 (937)
Q Consensus 608 ~~~------------------~----------------~~~~~~~~ll~~aa---~-----------~e~~s~hP~~~Ai 639 (937)
... . .......+.....+ . +.+...+|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 210 0 00001112222211 1 1234568999999
Q ss_pred HHHHHhcCCccccccCCceEEecCCe-------------------eEEEEc---C--eEEEeccHHHHHhcCCCCc-ch-
Q 002310 640 VEAAEFSNCQNVKVADGTFIEEPGSG-------------------TVAIIE---D--RKVSVGTIDWLRSHGVDTS-TF- 693 (937)
Q Consensus 640 ~~~a~~~~~~~~~~~~~~~~~~~g~g-------------------~~~~i~---~--~~~~~G~~~~l~~~~~~~~-~~- 693 (937)
+++|++.|+.........+... ..| ++..+. + ..++||+...+.++..... ..
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~-~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~ 578 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIR-ELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLR 578 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEe-ccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHH
Confidence 9999999887654443332222 222 222221 1 2389999988766544211 00
Q ss_pred ----hhHHHHHhCCCeEEEE--------------------------------------EECCEEEEEEEecCcCChhHHH
Q 002310 694 ----QEVEMEDLMNQSLVYV--------------------------------------GVDNMLAGLIYVEDRIRDDAAH 731 (937)
Q Consensus 694 ----~~~~~~~~~~~~~~~v--------------------------------------~~~~~~lG~i~l~D~lr~~a~e 731 (937)
+..++++.+|.+.+++ +.|+.++|.+++||+||++++|
T Consensus 579 e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPe 658 (1151)
T KOG0206|consen 579 EKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPE 658 (1151)
T ss_pred HHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchH
Confidence 1122333444444443 3478999999999999999999
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC----------------------------------------------
Q 002310 732 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---------------------------------------------- 765 (937)
Q Consensus 732 ~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---------------------------------------------- 765 (937)
+|+.|++||||+||+|||+.+||.+|+..|++.+
T Consensus 659 tI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 738 (1151)
T KOG0206|consen 659 TIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSE 738 (1151)
T ss_pred HHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCc
Confidence 9999999999999999999999999999999711
Q ss_pred -c-------------------------------eeEeccChhhHHHHHHHHhc-CCCEEEEEcCCcccHHHHHhCCeeEE
Q 002310 766 -D-------------------------------KVLSGVKPNEKKRFINELQN-DENVVAMVGDGINDAAALASSHIGVA 812 (937)
Q Consensus 766 -~-------------------------------~v~ar~~Pe~K~~iV~~Lq~-~G~~VamvGDG~NDa~AL~~AdVGIa 812 (937)
. .++||++|.||+.+|+..++ .+..+++||||+||++|+++|||||+
T Consensus 739 ~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVG 818 (1151)
T KOG0206|consen 739 KPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVG 818 (1151)
T ss_pred CCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCee
Confidence 0 58999999999999999974 58899999999999999999999999
Q ss_pred eC-CChHHHHhhcCEEEeCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 813 MG-GGVGAASEVASVVLMGNRLSQLLVALE-LSRLTMKTVKQNLWWAFGYNIVGIP 866 (937)
Q Consensus 813 mg-~gt~~a~~aADivL~~~~l~~l~~~i~-~~R~~~~~i~~nl~~a~~~Nii~i~ 866 (937)
++ .....|..+||+.+.. |+-+.+++. .||..|.++.+.+.+.|+.|+....
T Consensus 819 IsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~ 872 (1151)
T KOG0206|consen 819 ISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTF 872 (1151)
T ss_pred eccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHH
Confidence 96 3444455689988864 555555544 3999999999999999999986553
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=299.89 Aligned_cols=223 Identities=25% Similarity=0.415 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCce-EEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEee-c
Q 002310 331 MLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSK-ARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA-G 408 (937)
Q Consensus 331 ~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~-~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~-G 408 (937)
+++++++++.+++.++++|+.+.++++.+..+++ ++|+|+ |++++++++||+|||+|.+++||+|||||+|++ |
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~----~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g 76 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRD----GRWQKIPSSELVPGDIIILKAGDIVPADGILLESG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEET----TEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEec----cccccchHhhccceeeeecccccccccCccceecc
Confidence 4677889999999999999999999999988887 888877 599999999999999999999999999999999 9
Q ss_pred ceeeeeccccCCCcccccC-----CCCccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHH
Q 002310 409 RSTVDESSFTGEPLPVTKI-----PESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGH 483 (937)
Q Consensus 409 ~~~VDeS~LTGEs~pv~K~-----~g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~ 483 (937)
.++||||.+|||+.|+.|. .++.+|+||.+.+|.+.++|++||.+|.++++.+.+.+++.+++++++.++++..+
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKI 156 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHH
Confidence 9999999999999999999 99999999999999999999999999999999999999888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEE
Q 002310 484 FTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLL 563 (937)
Q Consensus 484 ~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilv 563 (937)
+++++++++++++++|++. ..+..+...+..++++++. +|||+++ +++|+++..+..+++++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~l~~---~~P~~l~--~~~~~~~~~~~~~~~~~~i~v 222 (230)
T PF00122_consen 157 LIIIILAIAILVFIIWFFN---------DSGISFFKSFLFAISLLIV---LIPCALP--LALPLSLAIAARRLAKNGIIV 222 (230)
T ss_dssp HHHHHHHHHHHHHHHCHTG---------STTCHCCHHHHHHHHHHHH---HS-TTHH--HHHHHHHHHHHHHHHHTTEEE
T ss_pred HHhcccccchhhhccceec---------ccccccccccccccceeee---eccccee--ehHHHHHHHHHHHHHHCCEEE
Confidence 9999998888888776552 1223456778888999999 9999999 999999999999999999999
Q ss_pred cCchHHhh
Q 002310 564 RGGNILEK 571 (937)
Q Consensus 564 k~~~~lE~ 571 (937)
|+++++|+
T Consensus 223 ~~~~a~E~ 230 (230)
T PF00122_consen 223 KNLSALEA 230 (230)
T ss_dssp SSTTHHHH
T ss_pred eCcccccC
Confidence 99999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=273.55 Aligned_cols=210 Identities=34% Similarity=0.509 Sum_probs=176.9
Q ss_pred ccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCcccccc
Q 002310 575 VNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVA 654 (937)
Q Consensus 575 v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~ 654 (937)
|++||||||||||+|++.+ . . .....++.++...+..+.||+..+++.++...... ..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---------------~-~~~~~~~~~~~~~~~~s~~p~~~~~~~~~~~~~~~-~~-- 58 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---------------P-PSNEAALAIAAALEQGSEHPIGKAIVEFAKNHQWS-KS-- 58 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---------------S-CSHHHHHHHHHHHHCTSTSHHHHHHHHHHHHHHHH-SC--
T ss_pred CeEEEEecCCCcccCeEEE---E---------------e-ccHHHHHHHHHHhhhcCCCcchhhhhhhhhhccch-hh--
Confidence 6899999999999999999 1 0 34678899999999999999999999988763222 11
Q ss_pred CCceEEecCCeeEEEEcCeEEEeccHHHHHhcCCCCc-chhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHH
Q 002310 655 DGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTS-TFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVV 733 (937)
Q Consensus 655 ~~~~~~~~g~g~~~~i~~~~~~~G~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I 733 (937)
...+...+++|....+++. +. |+++++.+.+.... ...........+...+++..+..++|.+.+.|++|++++++|
T Consensus 59 ~~~~~~~~~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l 136 (215)
T PF00702_consen 59 LESFSEFIGRGISGDVDGI-YL-GSPEWIHELGIRVISPDLVEEIQESQGRTVIVLAVNLIFLGLFGLRDPLRPGAKEAL 136 (215)
T ss_dssp CEEEEEETTTEEEEEEHCH-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEESHEEEEEEEEEEEBHTTHHHHH
T ss_pred hhhheeeeecccccccccc-cc-ccchhhhhccccccccchhhhHHHhhCCcccceeecCeEEEEEeecCcchhhhhhhh
Confidence 3567888999999999887 44 99999877654321 111111223345567777789999999999999999999999
Q ss_pred HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEecc--ChhhH--HHHHHHHhcCCCEEEEEcCCcccHHHHHhCC
Q 002310 734 NSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV--KPNEK--KRFINELQNDENVVAMVGDGINDAAALASSH 808 (937)
Q Consensus 734 ~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~--~Pe~K--~~iV~~Lq~~G~~VamvGDG~NDa~AL~~Ad 808 (937)
+.|+++|++++|+|||+..++.++++++||....+++++ +|++| .++|+.||.+++.|+|||||+||++|+++||
T Consensus 137 ~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 137 QELKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred hhhhccCcceeeeeccccccccccccccccccccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 999999999999999999999999999999866799999 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-16 Score=145.59 Aligned_cols=125 Identities=29% Similarity=0.473 Sum_probs=112.4
Q ss_pred CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEE
Q 002310 712 DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVV 791 (937)
Q Consensus 712 ~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~V 791 (937)
-+++.+.++-.-++=++++++|+.|++. ++|++.|||...+....|+-+||+.+++++...|+.|.++|+.|++.+++|
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k~ 96 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKV 96 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCCCcEE
Confidence 4567788888889999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCcccHHHHHhCCeeEEe-C--CChHHHHhhcCEEEeCCChhHHHHH
Q 002310 792 AMVGDGINDAAALASSHIGVAM-G--GGVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVGIam-g--~gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
.|||||+||.+||++||+||.. + +...-+.++||+++. ++..+.++
T Consensus 97 vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl 145 (152)
T COG4087 97 VMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDL 145 (152)
T ss_pred EEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHH
Confidence 9999999999999999999977 3 456677799999985 34444443
|
|
| >PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.5e-11 Score=102.25 Aligned_cols=62 Identities=34% Similarity=0.561 Sum_probs=58.7
Q ss_pred EEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcc
Q 002310 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFK 198 (937)
Q Consensus 129 ~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~ 198 (937)
+|.|+||+|++|+++|+++|.++|||.++++|+.++++.|.|+++..++ ++|.++|+++||+
T Consensus 1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~--------~~i~~~i~~~Gy~ 62 (62)
T PF00403_consen 1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSI--------EKIIEAIEKAGYE 62 (62)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCH--------HHHHHHHHHTTSE
T ss_pred CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCH--------HHHHHHHHHhCcC
Confidence 5899999999999999999999999999999999999999999988776 8899999999995
|
These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A .... |
| >COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.4e-11 Score=102.64 Aligned_cols=68 Identities=35% Similarity=0.462 Sum_probs=62.8
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
...+++|+||+|.+|+..|+++|++++||.+++||+..+++.|.+|+...+. ++|.++++++||++..
T Consensus 2 ~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~--------~~i~~ai~~aGy~~~~ 69 (71)
T COG2608 2 MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDI--------EAIIEAIEDAGYKVEE 69 (71)
T ss_pred ceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCH--------HHHHHHHHHcCCCeee
Confidence 4578999999999999999999999999999999999999999999977775 8999999999998753
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-09 Score=113.51 Aligned_cols=116 Identities=17% Similarity=0.199 Sum_probs=96.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEe--------c-------cChhhHHHHHHHHhcCC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS--------G-------VKPNEKKRFINELQNDE 788 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~a--------r-------~~Pe~K~~iV~~Lq~~G 788 (937)
+++|++++.|+.||+.| ++.++||-....+..+++++|++ .+++ + ..|++|..+++.+++.|
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~--~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~ 144 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 144 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCc--hhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC
Confidence 68999999999999975 99999999999999999999996 3443 1 35789999999999888
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002310 789 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 789 ~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~ 843 (937)
..+.|+|||.||.+|++.|++||++.....+...+=|+- .-.+.+.+..++..+
T Consensus 145 ~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~-~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 145 YRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFP-AVHTYEDLKREFLKA 198 (203)
T ss_pred CCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCC-cccCHHHHHHHHHHH
Confidence 889999999999999999999999975555554444433 335677777777765
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.1e-09 Score=116.06 Aligned_cols=115 Identities=22% Similarity=0.307 Sum_probs=99.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEe------------c-----cChhhHHHHHHHHhc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS------------G-----VKPNEKKRFINELQN 786 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~a------------r-----~~Pe~K~~iV~~Lq~ 786 (937)
++.|++.+.++.|++.|+++.++||.....+..+.+++|++ .+++ + +..+.|.+.++.+.+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld--~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLD--AAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCC--eEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 58999999999999999999999999988899999999996 3332 1 234689988888765
Q ss_pred C-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 787 D-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 787 ~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+ | ..+.++|||.||.+|++.|++|||+ ++.+..++.||.++..+++..+..++.
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 4 3 5799999999999999999999999 778888999999999899998887754
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.2e-08 Score=101.28 Aligned_cols=105 Identities=19% Similarity=0.219 Sum_probs=85.6
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhc----CCCEEEEEcCCcccHHHHHhC
Q 002310 732 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQN----DENVVAMVGDGINDAAALASS 807 (937)
Q Consensus 732 ~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~----~G~~VamvGDG~NDa~AL~~A 807 (937)
+|++|++.|+++.++|++....+..+.+++|+. .++... ..|.+.++.+.+ ....+.|+||+.||.+|++.|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~--~~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~a 111 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT--HLYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKV 111 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC--EEEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 899999999999999999999999999999997 555543 345555555433 235799999999999999999
Q ss_pred CeeEEeCCChHHHHhhcCEEEeCCC----hhHHHHHH
Q 002310 808 HIGVAMGGGVGAASEVASVVLMGNR----LSQLLVAL 840 (937)
Q Consensus 808 dVGIamg~gt~~a~~aADivL~~~~----l~~l~~~i 840 (937)
+++++|..+.+..+..+|+++..+. |..+.+.+
T Consensus 112 g~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 112 GLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCELL 148 (154)
T ss_pred CCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 9999999888889999999997553 44444443
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.87 E-value=9.7e-09 Score=108.32 Aligned_cols=113 Identities=23% Similarity=0.348 Sum_probs=94.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-----------------cChhhHHHHHHHHhc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------------VKPNEKKRFINELQN 786 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-----------------~~Pe~K~~iV~~Lq~ 786 (937)
+++|++++.++.|++.|+++.++|+.....+..+.+.+|+. .+++. ..+..|.++++.+.+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLD--AAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC--ceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 68999999999999999999999999999999999999996 34431 123347777776654
Q ss_pred CC----CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHH
Q 002310 787 DE----NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 787 ~G----~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
+. ..+.||||+.||.+|++.|+++|+++ +.+..++.||.+|.+++|..+..+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 42 35889999999999999999999996 567888899999999999887654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.9e-08 Score=98.76 Aligned_cols=100 Identities=23% Similarity=0.317 Sum_probs=83.1
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccCh--hhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCC
Q 002310 731 HVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP--NEKKRFINELQNDENVVAMVGDGINDAAALASSH 808 (937)
Q Consensus 731 e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~P--e~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~Ad 808 (937)
..|+.|++.|+++.++|+.+...+..+.+.+|+. .+|....| +--..+++.++-....++|+||+.||.+|++.|+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~--~~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag 118 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK--RFHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVG 118 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc--EEEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCC
Confidence 4799999999999999999999999999999997 66665543 3334444444333457999999999999999999
Q ss_pred eeEEeCCChHHHHhhcCEEEeCCC
Q 002310 809 IGVAMGGGVGAASEVASVVLMGNR 832 (937)
Q Consensus 809 VGIamg~gt~~a~~aADivL~~~~ 832 (937)
++++|+++.+..++.|+.|...++
T Consensus 119 ~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 119 LAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred CeEECcCchHHHHHhCCEEcCCCC
Confidence 999999999999999999886443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=9.3e-08 Score=97.92 Aligned_cols=139 Identities=21% Similarity=0.258 Sum_probs=102.0
Q ss_pred CCCeEEEEEECCEEEEE-EEe---cCcCChhH---HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccCh
Q 002310 702 MNQSLVYVGVDNMLAGL-IYV---EDRIRDDA---AHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 774 (937)
Q Consensus 702 ~~~~~~~v~~~~~~lG~-i~l---~D~lr~~a---~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~P 774 (937)
.+...+.+..||+++.- +.+ ..++++-. ..+|+.|++.|+++.++||.....+..+++++|+. .+|.. .
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~--~~f~g--~ 94 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT--HLYQG--Q 94 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc--eeecC--C
Confidence 35667777888887631 111 11122222 26899999999999999999999999999999997 56653 3
Q ss_pred hhHHHHHHHHh-cCC---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCC----ChhHHHHHHHHHH
Q 002310 775 NEKKRFINELQ-NDE---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGN----RLSQLLVALELSR 844 (937)
Q Consensus 775 e~K~~iV~~Lq-~~G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~----~l~~l~~~i~~~R 844 (937)
++|...++.+. +.| ..|+||||+.||.+|++.|.++++++.+.+..+..||+++-.+ .+..+.+.+...|
T Consensus 95 ~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 95 SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 45766666543 333 4699999999999999999999999888888888999998532 2455555554443
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.2e-08 Score=101.47 Aligned_cols=131 Identities=21% Similarity=0.245 Sum_probs=100.2
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------- 766 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------- 766 (937)
.++...||+++. =..++.+.+.++|++|++.|+++.+.||-....+..+++++++...
T Consensus 3 ~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~ 79 (215)
T TIGR01487 3 LVAIDIDGTLTE---PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLA 79 (215)
T ss_pred EEEEecCCCcCC---CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEe
Confidence 466677888774 1235889999999999999999999999999999999999997311
Q ss_pred ---------------------------------------------------e-e----EeccC--hhhHHHHHHHHhcC-
Q 002310 767 ---------------------------------------------------K-V----LSGVK--PNEKKRFINELQND- 787 (937)
Q Consensus 767 ---------------------------------------------------~-v----~ar~~--Pe~K~~iV~~Lq~~- 787 (937)
. + +..++ .-.|...++.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~ 159 (215)
T TIGR01487 80 NMEEEWFLDEEKKKRFPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELL 159 (215)
T ss_pred cccchhhHHHhhhhhhhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHh
Confidence 0 0 00111 23555555555432
Q ss_pred C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHH
Q 002310 788 E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 788 G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
| ..++++||+.||.+|++.|+.|++|+++.+.+++.||+|..+++-..+.++
T Consensus 160 ~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 160 GIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred CCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 2 348999999999999999999999999999999999999976665555543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=2e-07 Score=99.14 Aligned_cols=133 Identities=23% Similarity=0.285 Sum_probs=98.8
Q ss_pred eEEEEEECCEEEEEEEecC-cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc----------------e
Q 002310 705 SLVYVGVDNMLAGLIYVED-RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD----------------K 767 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D-~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~----------------~ 767 (937)
..++...||+++- .| .+.+.+.++|++|++.|+++++.||-....+..+.+++|+... .
T Consensus 4 kli~~DlDGTLl~----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~ 79 (230)
T PRK01158 4 KAIAIDIDGTITD----KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKR 79 (230)
T ss_pred eEEEEecCCCcCC----CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCE
Confidence 3566777888762 33 3789999999999999999999999999999999999997311 0
Q ss_pred -------------------------eEe------------------------------------------ccChh--hHH
Q 002310 768 -------------------------VLS------------------------------------------GVKPN--EKK 778 (937)
Q Consensus 768 -------------------------v~a------------------------------------------r~~Pe--~K~ 778 (937)
.+. ...|. .|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg 159 (230)
T PRK01158 80 IFLGDIEECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKG 159 (230)
T ss_pred EEEcchHHHHHHHHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChH
Confidence 000 00010 022
Q ss_pred HHHHHHhcC----CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 779 RFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 779 ~iV~~Lq~~----G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.-++.+.+. ...++++||+.||.+|++.|++|+||+++.+..++.||+|..+++=..+.++++
T Consensus 160 ~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 160 TGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred HHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 222222111 124899999999999999999999999999999999999998877777777664
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.4e-07 Score=98.62 Aligned_cols=96 Identities=23% Similarity=0.258 Sum_probs=80.3
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--------------eeEec-cChhhHHHHHHHHhc-
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--------------KVLSG-VKPNEKKRFINELQN- 786 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--------------~v~ar-~~Pe~K~~iV~~Lq~- 786 (937)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|++.. .+... +..+.|...++.+.+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~ 155 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE 155 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999531 12222 345789998866655
Q ss_pred CCC---EEEEEcCCcccHHHHHhCCeeEEeCCChH
Q 002310 787 DEN---VVAMVGDGINDAAALASSHIGVAMGGGVG 818 (937)
Q Consensus 787 ~G~---~VamvGDG~NDa~AL~~AdVGIamg~gt~ 818 (937)
.|. .+.++|||.||.|||+.|+.+|+++....
T Consensus 156 ~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~ 190 (212)
T COG0560 156 LGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK 190 (212)
T ss_pred cCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH
Confidence 455 49999999999999999999999985433
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.1e-07 Score=97.08 Aligned_cols=116 Identities=19% Similarity=0.245 Sum_probs=91.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc----------e-eEec--cChhhHHHHHHHHhcCCCE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD----------K-VLSG--VKPNEKKRFINELQNDENV 790 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~----------~-v~ar--~~Pe~K~~iV~~Lq~~G~~ 790 (937)
++.|++++.++.|+++ +++.++|+-....+..+.+++|+..- . +... ..|+.|...++.++..+..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~~ 146 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGYR 146 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCCe
Confidence 4689999999999999 99999999999999999999998520 0 1111 2578899999999988899
Q ss_pred EEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 791 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+.||||+.||.+|.++|++|+..+...+.....++..+. +++..+...+.
T Consensus 147 ~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~-~~~~el~~~l~ 196 (205)
T PRK13582 147 VIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV-HTYDELLAAID 196 (205)
T ss_pred EEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc-CCHHHHHHHHH
Confidence 999999999999999999999987654444445565322 45666655443
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.9e-07 Score=99.44 Aligned_cols=134 Identities=21% Similarity=0.314 Sum_probs=99.7
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--c----------------
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--D---------------- 766 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~---------------- 766 (937)
..+++..||+++.- ...+-+.++++|++|++.|+++++.||-....+..+.+++++.. .
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~ 80 (270)
T PRK10513 4 KLIAIDMDGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADG 80 (270)
T ss_pred EEEEEecCCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCC
Confidence 45667778888742 34688999999999999999999999999999999999998631 0
Q ss_pred ---------------------------------eeEec---------------------------------------cCh
Q 002310 767 ---------------------------------KVLSG---------------------------------------VKP 774 (937)
Q Consensus 767 ---------------------------------~v~ar---------------------------------------~~P 774 (937)
.++.. ..|
T Consensus 81 ~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 160 (270)
T PRK10513 81 ETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEP 160 (270)
T ss_pred CEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCH
Confidence 01100 001
Q ss_pred hhHHHHHHHHhcC-----------------------------------C---CEEEEEcCCcccHHHHHhCCeeEEeCCC
Q 002310 775 NEKKRFINELQND-----------------------------------E---NVVAMVGDGINDAAALASSHIGVAMGGG 816 (937)
Q Consensus 775 e~K~~iV~~Lq~~-----------------------------------G---~~VamvGDG~NDa~AL~~AdVGIamg~g 816 (937)
++..++.+.+++. | ..|+++|||.||.+||+.|++||||+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA 240 (270)
T PRK10513 161 EILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNA 240 (270)
T ss_pred HHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCc
Confidence 1111122222210 1 2488999999999999999999999999
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 817 VGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 817 t~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.+..|+.||.|..+++=..+.++++
T Consensus 241 ~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 241 IPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred cHHHHHhcCeeccCCCcchHHHHHH
Confidence 9999999999998877777777664
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=5.3e-08 Score=95.72 Aligned_cols=91 Identities=27% Similarity=0.476 Sum_probs=79.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEecc-------------------ChhhHHHHHHHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV-------------------KPNEKKRFINEL 784 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~-------------------~Pe~K~~iV~~L 784 (937)
.+-|+++|.++.|++.|.+|+++||--..-+..+|.++||+..++||+. .-.-|.++|+.+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~l 167 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALL 167 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHH
Confidence 5678999999999999999999999999999999999999876677653 246899999999
Q ss_pred hcC--CCEEEEEcCCcccHHHHHhCCeeEEeC
Q 002310 785 QND--ENVVAMVGDGINDAAALASSHIGVAMG 814 (937)
Q Consensus 785 q~~--G~~VamvGDG~NDa~AL~~AdVGIamg 814 (937)
++. .+.++|||||.||.+|...||-=|+.+
T Consensus 168 rk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 168 RKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred HhCCChheeEEecCCccccccCCchhhhhccC
Confidence 884 358999999999999999977666664
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.8e-07 Score=97.72 Aligned_cols=135 Identities=21% Similarity=0.251 Sum_probs=102.0
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc------------------
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 766 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------ 766 (937)
..+++..||+++. =..++.+.++++|+++++.|+++.+.||-....+..+.+++++...
T Consensus 4 kli~~DlDGTLl~---~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~ 80 (264)
T COG0561 4 KLLAFDLDGTLLD---SNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQ 80 (264)
T ss_pred eEEEEcCCCCccC---CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEee
Confidence 4566667777643 1223899999999999999999999999999999999999998320
Q ss_pred -----------------------ee-----------------------------------------EeccChh-------
Q 002310 767 -----------------------KV-----------------------------------------LSGVKPN------- 775 (937)
Q Consensus 767 -----------------------~v-----------------------------------------~ar~~Pe------- 775 (937)
.+ .....++
T Consensus 81 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
T COG0561 81 KPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVE 160 (264)
T ss_pred ecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHH
Confidence 00 0011112
Q ss_pred ----------------------------hHHHHHHHHhc-CCC---EEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhh
Q 002310 776 ----------------------------EKKRFINELQN-DEN---VVAMVGDGINDAAALASSHIGVAMGGGVGAASEV 823 (937)
Q Consensus 776 ----------------------------~K~~iV~~Lq~-~G~---~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~a 823 (937)
+|..-++.|.+ .|- .|+++||+.||.+||+.|..||||+++.+.+++.
T Consensus 161 ~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~ 240 (264)
T COG0561 161 ALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKEL 240 (264)
T ss_pred HHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhh
Confidence 23333333322 232 3999999999999999999999999999999999
Q ss_pred cCEEEeCCChhHHHHHHHH
Q 002310 824 ASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 824 ADivL~~~~l~~l~~~i~~ 842 (937)
||++...++=..|..+++.
T Consensus 241 A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 241 ADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred CCcccCCccchHHHHHHHH
Confidence 9988888888888877763
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.2e-07 Score=99.34 Aligned_cols=133 Identities=16% Similarity=0.185 Sum_probs=97.2
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------- 766 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------- 766 (937)
.+++..||+++. -...+.+.++++|++|++.|+++.+.||-....+..+.+++|++..
T Consensus 4 li~~DlDGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~ 80 (272)
T PRK15126 4 LAAFDMDGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHR 80 (272)
T ss_pred EEEEeCCCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEe
Confidence 566677888864 2336899999999999999999999999999999999999997310
Q ss_pred ----------------------------eeEec------------------------------------cChhhHHHHHH
Q 002310 767 ----------------------------KVLSG------------------------------------VKPNEKKRFIN 782 (937)
Q Consensus 767 ----------------------------~v~ar------------------------------------~~Pe~K~~iV~ 782 (937)
..+.. ..|++-.++.+
T Consensus 81 ~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~ 160 (272)
T PRK15126 81 QDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQI 160 (272)
T ss_pred ecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHH
Confidence 00000 01111111222
Q ss_pred HHhcC-----------------------------------C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhc
Q 002310 783 ELQND-----------------------------------E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVA 824 (937)
Q Consensus 783 ~Lq~~-----------------------------------G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aA 824 (937)
.+++. | ..|+++|||.||.+||+.|+.||||+++.+.+|+.|
T Consensus 161 ~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A 240 (272)
T PRK15126 161 QLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAEL 240 (272)
T ss_pred HHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhC
Confidence 22210 1 248899999999999999999999999999999999
Q ss_pred CE--EEeCCChhHHHHHHH
Q 002310 825 SV--VLMGNRLSQLLVALE 841 (937)
Q Consensus 825 Di--vL~~~~l~~l~~~i~ 841 (937)
|. |..+++=..+.++++
T Consensus 241 ~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 241 PHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred CCCeecCCCcchHHHHHHH
Confidence 85 666677677776664
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=7.3e-07 Score=97.06 Aligned_cols=133 Identities=17% Similarity=0.197 Sum_probs=97.3
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------- 766 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------- 766 (937)
.+++..||+++- -...+.+.+.++|+++++.|+++.+.||-....+..+.+++|++..
T Consensus 4 li~~DlDGTLl~---~~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~ 80 (266)
T PRK10976 4 VVASDLDGTLLS---PDHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFS 80 (266)
T ss_pred EEEEeCCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehh
Confidence 566777888763 1335889999999999999999999999999999999999997210
Q ss_pred -----------------------------eeEe-cc------------------------------------ChhhHHHH
Q 002310 767 -----------------------------KVLS-GV------------------------------------KPNEKKRF 780 (937)
Q Consensus 767 -----------------------------~v~a-r~------------------------------------~Pe~K~~i 780 (937)
.++. +. .+++..++
T Consensus 81 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~ 160 (266)
T PRK10976 81 HNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPL 160 (266)
T ss_pred hcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHH
Confidence 0010 00 01111112
Q ss_pred HHHHhcC-----------------------------------C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHh
Q 002310 781 INELQND-----------------------------------E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASE 822 (937)
Q Consensus 781 V~~Lq~~-----------------------------------G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~ 822 (937)
.+.+++. | ..|+++||+.||.+||+.|+.||||+++.+..|+
T Consensus 161 ~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~ 240 (266)
T PRK10976 161 EQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKD 240 (266)
T ss_pred HHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHH
Confidence 2223210 1 2488999999999999999999999999999999
Q ss_pred hcC--EEEeCCChhHHHHHHH
Q 002310 823 VAS--VVLMGNRLSQLLVALE 841 (937)
Q Consensus 823 aAD--ivL~~~~l~~l~~~i~ 841 (937)
.|| .|..+++=..+..+++
T Consensus 241 ~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 241 LLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred hCCCCeecccCchHHHHHHHH
Confidence 987 6766777777776664
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.2e-07 Score=94.29 Aligned_cols=100 Identities=24% Similarity=0.281 Sum_probs=80.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-----------------cChhhHHHHHHHHhc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------------VKPNEKKRFINELQN 786 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-----------------~~Pe~K~~iV~~Lq~ 786 (937)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+. .+++. ..|..|.++++.+.+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD--YVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC--eEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 58999999999999999999999999999999999999986 33321 234567777776644
Q ss_pred C----CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcC
Q 002310 787 D----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVAS 825 (937)
Q Consensus 787 ~----G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aAD 825 (937)
+ ...+.|+||+.||.+|++.|+++++++.+....+.++|
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 3 34599999999999999999999999865555555554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.6e-07 Score=94.69 Aligned_cols=124 Identities=22% Similarity=0.279 Sum_probs=92.9
Q ss_pred EEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc----------------------
Q 002310 709 VGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---------------------- 766 (937)
Q Consensus 709 v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~---------------------- 766 (937)
+..||+++- =...+.+.+.++|++|++.|+++++.||-+...+..+.+++|+...
T Consensus 3 ~DlDGTLl~---~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~ 79 (225)
T TIGR01482 3 SDIDGTLTD---PNRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAY 79 (225)
T ss_pred EeccCccCC---CCcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecc
Confidence 345666652 1224788999999999999999999999999999999999995210
Q ss_pred ---------------------------------------------------ee-------EeccCh--hhHHHHHHHHhc
Q 002310 767 ---------------------------------------------------KV-------LSGVKP--NEKKRFINELQN 786 (937)
Q Consensus 767 ---------------------------------------------------~v-------~ar~~P--e~K~~iV~~Lq~ 786 (937)
.+ +....| -.|..-++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~ 159 (225)
T TIGR01482 80 LEEEWFLDIVIAKTFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKE 159 (225)
T ss_pred cCHHHHHHHHHhcccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHH
Confidence 00 001112 245444544433
Q ss_pred C-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhH
Q 002310 787 D-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQ 835 (937)
Q Consensus 787 ~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~ 835 (937)
. | ..|+++||+.||.+|++.|++|+||+++.+..++.||.|..+++-..
T Consensus 160 ~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G 212 (225)
T TIGR01482 160 KLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEG 212 (225)
T ss_pred HhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCc
Confidence 2 2 45899999999999999999999999999999999999987766666
|
catalyze the same reaction as SPP. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.5e-07 Score=87.29 Aligned_cols=116 Identities=20% Similarity=0.226 Sum_probs=97.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcC----CCEEEEEcCCcccHHHHHhC
Q 002310 732 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND----ENVVAMVGDGINDAAALASS 807 (937)
Q Consensus 732 ~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~----G~~VamvGDG~NDa~AL~~A 807 (937)
.|+.|.++||+|.++||-+...++.=|+++||. .+|-. -++|....+.|.++ -.-|+++||..||-|++++.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~--~~~qG--~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~v 118 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK--HLYQG--ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKV 118 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc--eeeec--hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHc
Confidence 689999999999999999999999999999997 67744 45898888877654 34699999999999999999
Q ss_pred CeeEEeCCChHHHHhhcCEEEeCCC----hhHHHHHHHHHHHHHHHHH
Q 002310 808 HIGVAMGGGVGAASEVASVVLMGNR----LSQLLVALELSRLTMKTVK 851 (937)
Q Consensus 808 dVGIamg~gt~~a~~aADivL~~~~----l~~l~~~i~~~R~~~~~i~ 851 (937)
..+++..++....++.||+|+..+. ++.+.++|..++..+....
T Consensus 119 Gls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~ 166 (170)
T COG1778 119 GLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEAL 166 (170)
T ss_pred CCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHH
Confidence 9999999999999999999987643 6677777777776655443
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.6e-06 Score=91.79 Aligned_cols=114 Identities=22% Similarity=0.430 Sum_probs=86.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-------------------cChhhHHHHHHHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-------------------VKPNEKKRFINEL 784 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-------------------~~Pe~K~~iV~~L 784 (937)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+....+|+. .....|.+.++.+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~ 163 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHI 163 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHH
Confidence 478999999999999999999999999999999999999974345431 0123588888877
Q ss_pred hcC--CCEEEEEcCCcccHHHHHh--CCeeEEeCCC--hHHHHhhcCEEEeCCChhHHHHH
Q 002310 785 QND--ENVVAMVGDGINDAAALAS--SHIGVAMGGG--VGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 785 q~~--G~~VamvGDG~NDa~AL~~--AdVGIamg~g--t~~a~~aADivL~~~~l~~l~~~ 839 (937)
+++ ...+.|+||+.||..|.++ ++++++.+.. .+.....+|.++ +++..+...
T Consensus 164 ~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~ 222 (224)
T PLN02954 164 KKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIEV 222 (224)
T ss_pred HHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHHh
Confidence 654 2568999999999999777 5777776632 233445689887 456666554
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=2.9e-06 Score=92.61 Aligned_cols=52 Identities=29% Similarity=0.379 Sum_probs=46.9
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.|+++||+.||.+|++.|++|++||++.+..++.||.|..+++=..+..+++
T Consensus 217 e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 217 NVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred HeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 4889999999999999999999999888888999999998888777777764
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.38 E-value=2e-06 Score=90.39 Aligned_cols=118 Identities=19% Similarity=0.195 Sum_probs=86.7
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-----------cCh------------hhHHH
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------VKP------------NEKKR 779 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-----------~~P------------e~K~~ 779 (937)
-+++|++.+.++.|++.|+++.++||........+.+.++.. ..+++. ..| ..|..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~-~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK-DRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc-ccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 479999999999999999999999999999999999887543 244331 113 35899
Q ss_pred HHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 780 FINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 780 iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+++.++.....+.|||||.||..|++.||+.++-+.-.+-.++.---...-++|..+...++
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 99999888888999999999999999999987754222212221111222256777766553
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.36 E-value=8.3e-07 Score=91.29 Aligned_cols=79 Identities=32% Similarity=0.477 Sum_probs=67.0
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEe-------------ccChh-h--HHHHHHHH------
Q 002310 727 DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-------------GVKPN-E--KKRFINEL------ 784 (937)
Q Consensus 727 ~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~a-------------r~~Pe-~--K~~iV~~L------ 784 (937)
+++.+.|+.++++|++++++||+....++.+++.+|++...+++ +.+|. + |.+.++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 77779999999999999999999999999999999998543332 33333 3 99999999
Q ss_pred hcCCCEEEEEcCCcccHHHHH
Q 002310 785 QNDENVVAMVGDGINDAAALA 805 (937)
Q Consensus 785 q~~G~~VamvGDG~NDa~AL~ 805 (937)
+.....+.++|||.||.||||
T Consensus 172 ~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 172 DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp THTCCEEEEEESSGGGHHHHH
T ss_pred CCCCCeEEEEECCHHHHHHhC
Confidence 445789999999999999986
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.35 E-value=3e-06 Score=90.64 Aligned_cols=119 Identities=22% Similarity=0.276 Sum_probs=92.7
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-----------------------------------
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD----------------------------------- 766 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~----------------------------------- 766 (937)
...+.+.+.+++++|+++|+++.+.||-....+..+.+++++...
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 446789999999999999999999999999999999999997310
Q ss_pred --------------------------------------------------eeEec-------------------------
Q 002310 767 --------------------------------------------------KVLSG------------------------- 771 (937)
Q Consensus 767 --------------------------------------------------~v~ar------------------------- 771 (937)
.+...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 11111
Q ss_pred -------cCh--hhHHHHHHHHhcC----CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHH
Q 002310 772 -------VKP--NEKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLV 838 (937)
Q Consensus 772 -------~~P--e~K~~iV~~Lq~~----G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~ 838 (937)
++| -.|..-++.|.+. ...+.++||+.||.+||+.|+.||||+++++..++.||.+....+=..+.+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 122 3566655555431 246899999999999999999999999999999999999998654466665
Q ss_pred HH
Q 002310 839 AL 840 (937)
Q Consensus 839 ~i 840 (937)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 43
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.6e-06 Score=92.18 Aligned_cols=50 Identities=32% Similarity=0.393 Sum_probs=44.1
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHH
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
.++++||+.||.+|++.|+.|++|+++.+..++.||+++.+++=..+..+
T Consensus 206 ~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 206 DVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred HEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 48899999999999999999999999999999999999987766655543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.1e-06 Score=89.31 Aligned_cols=114 Identities=19% Similarity=0.258 Sum_probs=85.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec---c--------C--h----------hhHHHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG---V--------K--P----------NEKKRF 780 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar---~--------~--P----------e~K~~i 780 (937)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+ +..+.+++. . . | ..|..+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 68999999999999999999999999999999999998 754445532 1 1 1 248899
Q ss_pred HHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhh--cCEEEeCCChhHHHHHH
Q 002310 781 INELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV--ASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 781 V~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~a--ADivL~~~~l~~l~~~i 840 (937)
++.++.....+.|||||.||..|.++||+.++-+.-.+.+++. +.+.+ ++|..+...+
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 9999888788999999999999999999977743111222222 33322 5677766554
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.28 E-value=6.8e-06 Score=97.75 Aligned_cols=52 Identities=29% Similarity=0.408 Sum_probs=47.7
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.|+++|||.||.+||+.|+.||||+++.+..|+.||+|..+++=..|..+++
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4899999999999999999999999999999999999998888777877765
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.18 E-value=5.1e-06 Score=85.09 Aligned_cols=90 Identities=20% Similarity=0.268 Sum_probs=75.1
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeEec-----------cCh------------hhH
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLSG-----------VKP------------NEK 777 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~ar-----------~~P------------e~K 777 (937)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+... .+++. ..| ..|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 47899999999999999999999999999999999999998531 23321 111 259
Q ss_pred HHHHHHHhcC-CCEEEEEcCCcccHHHHHhCCeeEE
Q 002310 778 KRFINELQND-ENVVAMVGDGINDAAALASSHIGVA 812 (937)
Q Consensus 778 ~~iV~~Lq~~-G~~VamvGDG~NDa~AL~~AdVGIa 812 (937)
.++++.++++ ...+.|+|||.||..|.++||+-.|
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 9999999887 8899999999999999999987554
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.5e-06 Score=85.48 Aligned_cols=82 Identities=27% Similarity=0.383 Sum_probs=68.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEe-------------------ccChhhHHHHHHHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-------------------GVKPNEKKRFINEL 784 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~a-------------------r~~Pe~K~~iV~~L 784 (937)
+++|++.+.++.|++.|++++++||.....+..+++.+|+.. +++ ...++.|..+++.+
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~--~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD--VFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch--heeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 368999999999999999999999999999999999999862 221 23457899999887
Q ss_pred hcC----CCEEEEEcCCcccHHHHHhC
Q 002310 785 QND----ENVVAMVGDGINDAAALASS 807 (937)
Q Consensus 785 q~~----G~~VamvGDG~NDa~AL~~A 807 (937)
+++ ...+.|+|||.||.+|++.|
T Consensus 151 ~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 654 34699999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.13 E-value=8.2e-06 Score=84.81 Aligned_cols=92 Identities=17% Similarity=0.216 Sum_probs=76.6
Q ss_pred ecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec------------------cChhhHHHHHH
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG------------------VKPNEKKRFIN 782 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar------------------~~Pe~K~~iV~ 782 (937)
+..++++++.+.++.+++.|++++++|+-....+..+++.+|++ .+++. +.++.|.+.++
T Consensus 84 ~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~--~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~ 161 (202)
T TIGR01490 84 IESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID--NAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALA 161 (202)
T ss_pred HHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc--ceEecceEEcCCCEEeCCccCCCCCChHHHHHHH
Confidence 34579999999999999999999999999999999999999996 23221 23467888887
Q ss_pred HHhc-CCC---EEEEEcCCcccHHHHHhCCeeEEeC
Q 002310 783 ELQN-DEN---VVAMVGDGINDAAALASSHIGVAMG 814 (937)
Q Consensus 783 ~Lq~-~G~---~VamvGDG~NDa~AL~~AdVGIamg 814 (937)
.+.+ .+. .+.++||+.||.|+++.|+.++++.
T Consensus 162 ~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 162 ELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 7644 342 6899999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.3e-05 Score=82.82 Aligned_cols=119 Identities=21% Similarity=0.264 Sum_probs=89.6
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-----ccCh--hhHHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-----GVKP--NEKKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-----r~~P--e~K~~iV~~Lq~~G~~Vam 793 (937)
.++.|++.+.++.|++.|+++.++|+........+.+..|+.. +.+++ +..| +--..+++.++.....+.|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~ 171 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLF 171 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEE
Confidence 4689999999999999999999999999999999999999853 12222 1233 2224455556555678999
Q ss_pred EcCCcccHHHHHhCCe-eEEeCC----ChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002310 794 VGDGINDAAALASSHI-GVAMGG----GVGAASEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 794 vGDG~NDa~AL~~AdV-GIamg~----gt~~a~~aADivL~~~~l~~l~~~i~~~ 843 (937)
+||+.||..+.++|++ +|.+.. ..+.....+|.++ +++..+...+..+
T Consensus 172 igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 172 VGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred ECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 9999999999999998 666532 2344455688777 6788888877543
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00023 Score=83.35 Aligned_cols=96 Identities=16% Similarity=0.242 Sum_probs=77.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEe-----ccChhhHHHHHHHHhcCCCEEEEEcCCc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-----GVKPNEKKRFINELQNDENVVAMVGDGI 798 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~a-----r~~Pe~K~~iV~~Lq~~G~~VamvGDG~ 798 (937)
|++|++.+.+++++++|+++.++|+=.+..++.+++.+|+.. .+.+ +..|+.|.+.+++...++ .+.|+||..
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-~Vigsd~~~~~kg~~K~~~l~~~l~~~-~~~yvGDS~ 149 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-GVFASDGTTNLKGAAKAAALVEAFGER-GFDYAGNSA 149 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-EEEeCCCccccCCchHHHHHHHHhCcc-CeeEecCCH
Confidence 588999999999999999999999999999999999999832 3432 356778877665433222 257899999
Q ss_pred ccHHHHHhCCeeEEeCCChHHHH
Q 002310 799 NDAAALASSHIGVAMGGGVGAAS 821 (937)
Q Consensus 799 NDa~AL~~AdVGIamg~gt~~a~ 821 (937)
||.|+++.|+-.++++.+....+
T Consensus 150 ~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 150 ADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred HHHHHHHhCCCeEEECCCHHHHH
Confidence 99999999999999986554443
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.98 E-value=5.5e-05 Score=82.70 Aligned_cols=57 Identities=19% Similarity=0.276 Sum_probs=48.4
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~ 764 (937)
.++++..||+++.- .+.+.+++.++|++|++.|++++++||-....+..+.+++|+.
T Consensus 5 kli~~DlDGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 5 LLVFTDLDGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred eEEEEcCcccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 46677778887641 3457788999999999999999999999999999999999973
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.98 E-value=5.7e-05 Score=79.78 Aligned_cols=118 Identities=23% Similarity=0.347 Sum_probs=91.1
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeEe-cc------ChhhHHHHHHHHhcCCCEEE
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS-GV------KPNEKKRFINELQNDENVVA 792 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~a-r~------~Pe~K~~iV~~Lq~~G~~Va 792 (937)
...+-|+++++++.|+++|++..++|+++...+..+.+..|+..- .+++ .- .|+.....++.+....+.++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 456789999999999999999999999999999999999999632 2333 22 34455555566655534799
Q ss_pred EEcCCcccHHHHHhCC---eeEEeCC--ChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 793 MVGDGINDAAALASSH---IGVAMGG--GVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 793 mvGDG~NDa~AL~~Ad---VGIamg~--gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
||||..||..|-++|+ ||+..|. ........+|.++ +++..|...+.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 9999999999999998 6677763 4567777799988 56777766543
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.95 E-value=7.5e-05 Score=81.56 Aligned_cols=60 Identities=15% Similarity=0.179 Sum_probs=50.0
Q ss_pred CCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002310 702 MNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 702 ~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~ 764 (937)
+....++...||+++- =...+-+.++++|++|++.|+++++.||-....+..+.+++|++
T Consensus 5 ~~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 5 QDPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CCCeEEEEeCccCCcC---CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 3556788888999863 12345578999999999999999999999999999999999873
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.91 E-value=4.5e-05 Score=72.86 Aligned_cols=92 Identities=22% Similarity=0.317 Sum_probs=71.5
Q ss_pred ecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--CceeEe-----------------------ccChh
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP--KDKVLS-----------------------GVKPN 775 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~--~~~v~a-----------------------r~~Pe 775 (937)
...++.+++.+.+++|++.|++++++||.....+..+.+++|+. .+.+++ +-.|+
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 34589999999999999999999999999999999999999972 222332 23444
Q ss_pred hHHHHHHHHhcCCCEEEEEcCCcccHHHHHh-CCeeEE
Q 002310 776 EKKRFINELQNDENVVAMVGDGINDAAALAS-SHIGVA 812 (937)
Q Consensus 776 ~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~-AdVGIa 812 (937)
.+..+.+.++.....+.++||+.||..|++. ..-+|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 5555555555556789999999999999998 555544
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0001 Score=76.93 Aligned_cols=115 Identities=18% Similarity=0.297 Sum_probs=84.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cCh--hhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~P--e~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++.|+++.++|+.....+..+-+..|+.. +.+++. ..| +-=..+++.++-....++||
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~i 154 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMV 154 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEE
Confidence 788999999999999999999999999999999999999953 233321 223 22234444444445679999
Q ss_pred cCCcccHHHHHhCCeeEE-e--C--CChHHHHhhcCEEEeCCChhHHHHHH
Q 002310 795 GDGINDAAALASSHIGVA-M--G--GGVGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIa-m--g--~gt~~a~~aADivL~~~~l~~l~~~i 840 (937)
||+.+|..+-++|++-.. + | ...+...+.+|+++ +++..|..++
T Consensus 155 gD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 155 GDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred cCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 999999999999998643 2 3 33345566789886 5676666544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.78 E-value=3.7e-05 Score=91.99 Aligned_cols=71 Identities=30% Similarity=0.416 Sum_probs=66.9
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccCC
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMG 205 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 205 (937)
+-.++|.||+|.+|+..+|+.|++++||.++.|.+..+++.+.|||...+. +.+.+.++++||.+++.+..
T Consensus 70 ~~~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s~--------~~~~e~ie~~gf~a~~i~~~ 140 (951)
T KOG0207|consen 70 KCYLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTSP--------DSIAESIEDLGFSAELIESV 140 (951)
T ss_pred eeEEEecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccCc--------hhHHHHHHhcCccceehhcc
Confidence 678999999999999999999999999999999999999999999999987 89999999999999876654
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00029 Score=76.96 Aligned_cols=117 Identities=18% Similarity=0.244 Sum_probs=83.0
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-ccChhhH------HHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVKPNEK------KRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r~~Pe~K------~~iV~~Lq~~G~~Vam 793 (937)
.++.|++.++++.|++.|+++.++|+-....+..+.++.|+.. +.+++ ...+..| ..+.+.+.-....+.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~ 179 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLF 179 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEE
Confidence 4789999999999999999999999999999999999999853 12332 2223223 2233333323457999
Q ss_pred EcCCcccHHHHHhCCe-eEEe--C--CChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 794 VGDGINDAAALASSHI-GVAM--G--GGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 794 vGDG~NDa~AL~~AdV-GIam--g--~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
|||+.||..+.++|++ .+++ | ...+.....+|.++ +++..+..++.
T Consensus 180 IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 180 VGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred ECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 9999999999999997 3444 3 22334455788887 56777765533
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00032 Score=75.90 Aligned_cols=52 Identities=21% Similarity=0.123 Sum_probs=43.1
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeCCCh---HHHHhh--c-CEEEeCCChhHHHHHHH
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMGGGV---GAASEV--A-SVVLMGNRLSQLLVALE 841 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg~gt---~~a~~a--A-DivL~~~~l~~l~~~i~ 841 (937)
.|.++||+.||.+||+.|+.||||+++. +..++. | +.|..+++-..+.++++
T Consensus 196 ~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 196 KVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred eEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 4899999999999999999999999887 467776 4 47777777777777665
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0002 Score=76.47 Aligned_cols=52 Identities=17% Similarity=0.214 Sum_probs=44.5
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcC----EEEeCCChhHHHHHHH
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVAS----VVLMGNRLSQLLVALE 841 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aAD----ivL~~~~l~~l~~~i~ 841 (937)
.|+++||+.||.+|++.++.||+|+++.+..++.|| +|...++=..+.++|+
T Consensus 177 ~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 177 QILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred HEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 488999999999999999999999999999999999 6665666566766664
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00027 Score=74.16 Aligned_cols=115 Identities=20% Similarity=0.258 Sum_probs=82.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-c----cC--hhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G----VK--PNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r----~~--Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|+.....+..+-+..|+.. +.+++ . .. |+--.++++.++-....+.||
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 161 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMV 161 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEE
Confidence 478999999999999999999999999999999999999963 12222 1 12 333344455554445679999
Q ss_pred cCCcccHHHHHhCCeeE---EeCC-C-hHHHHhhcCEEEeCCChhHHHHHH
Q 002310 795 GDGINDAAALASSHIGV---AMGG-G-VGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGI---amg~-g-t~~a~~aADivL~~~~l~~l~~~i 840 (937)
||..+|..|-++|++-. .-|. . .+.....+|.++ +++..+...+
T Consensus 162 GDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 162 GDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred CCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 99999999999999843 2232 2 223345688775 4677776654
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00014 Score=91.90 Aligned_cols=64 Identities=34% Similarity=0.583 Sum_probs=54.0
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (937)
.++++.|+||+|++|+.+||++|++++||.+++||+. +..+..+ .++ +.+.++++++||++...
T Consensus 3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~---~~~--------~~i~~~i~~~Gy~~~~~ 66 (834)
T PRK10671 3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGT---ASA--------EALIETIKQAGYDASVS 66 (834)
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEec---CCH--------HHHHHHHHhcCCccccc
Confidence 4689999999999999999999999999999999995 4555443 233 78999999999998753
|
|
| >TIGR00003 copper ion binding protein | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00041 Score=56.01 Aligned_cols=65 Identities=18% Similarity=0.290 Sum_probs=55.0
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccc
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (937)
+..+.|.||+|.+|+..+++.++..+++..+.+++..+++.+.|++..... ..+...+++.||.+
T Consensus 3 ~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~ 67 (68)
T TIGR00003 3 KFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATE--------ICIAEAILDAGYEV 67 (68)
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCH--------HHHHHHHHHcCCCc
Confidence 457899999999999999999999999999999999999999998654443 55666678888854
|
This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0006 Score=71.32 Aligned_cols=113 Identities=17% Similarity=0.212 Sum_probs=79.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cChh--hHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPN--EKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~Pe--~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++.|+++.++|+-....+..+.+..|+.. +.+++. ..|+ -=....+.+.-....++||
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 164 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYV 164 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEe
Confidence 688999999999999999999999999999999999999842 123332 2232 1123333333334569999
Q ss_pred cCCcccHHHHHhCCeeEEe---CCC--hHHHHhhcCEEEeCCChhHHHH
Q 002310 795 GDGINDAAALASSHIGVAM---GGG--VGAASEVASVVLMGNRLSQLLV 838 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIam---g~g--t~~a~~aADivL~~~~l~~l~~ 838 (937)
||..||..|.++|++-... |.+ .......+|.++ +++..+..
T Consensus 165 gDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 165 GDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred CCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 9999999999999986543 322 223334688776 45666554
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0013 Score=71.04 Aligned_cols=118 Identities=18% Similarity=0.251 Sum_probs=83.2
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--CceeEecc-----------C--h----hhHHHHHHH
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP--KDKVLSGV-----------K--P----NEKKRFINE 783 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~--~~~v~ar~-----------~--P----e~K~~iV~~ 783 (937)
-++||++.+.++.|++.|+++.++||-....+..+.++.|+. ...++|+. . | ..|.+.+..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~ 199 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVAL 199 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHH
Confidence 478999999999999999999999999999999999999983 22332110 1 2 346554432
Q ss_pred -----Hh--cCCCEEEEEcCCcccHHHHHhC---CeeEEeC---CC----hHHHHhhcCEEEeCCChhHHHHHH
Q 002310 784 -----LQ--NDENVVAMVGDGINDAAALASS---HIGVAMG---GG----VGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 784 -----Lq--~~G~~VamvGDG~NDa~AL~~A---dVGIamg---~g----t~~a~~aADivL~~~~l~~l~~~i 840 (937)
++ .....|.|+|||.||..|..-. +-=|.+| .- -+.-+++-||||.+|.=-.++..|
T Consensus 200 ~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~i 273 (277)
T TIGR01544 200 RNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANSI 273 (277)
T ss_pred HHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHHH
Confidence 22 2345799999999999996544 2234444 22 234566889999998765566554
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PLN02957 copper, zinc superoxide dismutase | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0004 Score=74.03 Aligned_cols=68 Identities=29% Similarity=0.403 Sum_probs=58.7
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
+.++.+.+ +|+|.+|+..|++.|++++||..+.+|+..+++.|.++. .. +.+.+++++.||.+.+...
T Consensus 5 ~~~~~~~V-gMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~---~~--------~~I~~aIe~~Gy~a~~~~~ 72 (238)
T PLN02957 5 ELLTEFMV-DMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSS---PV--------KAMTAALEQTGRKARLIGQ 72 (238)
T ss_pred cEEEEEEE-CccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecC---CH--------HHHHHHHHHcCCcEEEecC
Confidence 45677888 799999999999999999999999999999999998832 22 6788999999999876654
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00099 Score=71.79 Aligned_cols=57 Identities=9% Similarity=0.036 Sum_probs=45.6
Q ss_pred EEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 707 VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 707 ~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
++...|++|+.---=..+..|...++++++++.|+.+++.||-.....+.+.+++++
T Consensus 4 i~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 4 LVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred EEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence 444567777621111456779999999999999999999999999999999998886
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0012 Score=71.90 Aligned_cols=61 Identities=13% Similarity=0.132 Sum_probs=47.3
Q ss_pred CCeEEEEEECCEEEEEEEe--cCcCChhHHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 703 NQSLVYVGVDNMLAGLIYV--EDRIRDDAAHVVNSLSS-QGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 703 ~~~~~~v~~~~~~lG~i~l--~D~lr~~a~e~I~~L~~-aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
....+++..||+|+-...= .-.+-++++++|+.|++ .|+.++++||-.......+.+.+++
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~ 76 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRF 76 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccc
Confidence 3467888899998742110 11456899999999998 7999999999999999888876664
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0021 Score=70.06 Aligned_cols=114 Identities=19% Similarity=0.194 Sum_probs=80.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeE-eccChhhHHHHHH-HHhc---CCCEEEEEcC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVL-SGVKPNEKKRFIN-ELQN---DENVVAMVGD 796 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~-ar~~Pe~K~~iV~-~Lq~---~G~~VamvGD 796 (937)
++.|++.++++.|++.|+++.++|+.+...+..+-+..|+.+. .+. +...+ .|.+.++ .+++ ....++||||
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~-~k~~~~~~~l~~~~~~p~~~l~IGD 220 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL-SKRRALSQLVAREGWQPAAVMYVGD 220 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC-CCHHHHHHHHHHhCcChhHEEEECC
Confidence 5789999999999999999999999999999999999998532 122 22211 1333332 3333 3456999999
Q ss_pred CcccHHHHHhCCeeEEe---CCChH--HHHhhcCEEEeCCChhHHHHHH
Q 002310 797 GINDAAALASSHIGVAM---GGGVG--AASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 797 G~NDa~AL~~AdVGIam---g~gt~--~a~~aADivL~~~~l~~l~~~i 840 (937)
..+|..|-++|++-... |.... .....+|+++ +++..|...+
T Consensus 221 s~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 221 ETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 99999999999886432 22222 3334689887 5688777654
|
|
| >KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00063 Score=67.64 Aligned_cols=69 Identities=26% Similarity=0.383 Sum_probs=58.0
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
...++|.| -|+|.+|+..|++.|+.++||.+++|++....+.|..... . .++.+.|+..|-++.++..
T Consensus 6 ~~~~efaV-~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p---~--------s~i~~~le~tGr~Avl~G~ 73 (247)
T KOG4656|consen 6 TYEAEFAV-QMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVP---P--------SEIQNTLENTGRDAVLRGA 73 (247)
T ss_pred ceeEEEEE-echhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCC---h--------HHHHHHHHhhChheEEecC
Confidence 34577777 4999999999999999999999999999999999974322 1 7899999999998887665
Q ss_pred C
Q 002310 205 G 205 (937)
Q Consensus 205 ~ 205 (937)
.
T Consensus 74 G 74 (247)
T KOG4656|consen 74 G 74 (247)
T ss_pred C
Confidence 3
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0012 Score=69.87 Aligned_cols=112 Identities=16% Similarity=0.187 Sum_probs=78.9
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cChhhHHHHHHHHhcCC---CEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPNEKKRFINELQNDE---NVVA 792 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~Pe~K~~iV~~Lq~~G---~~Va 792 (937)
-++.|++.++++.|++.|+++.++|+........+.++.||.. +.+++. ..|+-. -+.+.+++.| ..+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~-~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPE-VYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHH-HHHHHHHHcCCCHHHeE
Confidence 4688999999999999999999999999999999999999853 122221 223222 2333444443 5689
Q ss_pred EEcCCcccHHHHHhCCeeEEeC-C---ChHHHHhhcCEEEeCCChhHHH
Q 002310 793 MVGDGINDAAALASSHIGVAMG-G---GVGAASEVASVVLMGNRLSQLL 837 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdVGIamg-~---gt~~a~~aADivL~~~~l~~l~ 837 (937)
||||..||..+.++|++....- . ..+.-...+|.++ .++..+.
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 9999999999999999875442 2 2222233577766 4566554
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0037 Score=66.22 Aligned_cols=53 Identities=17% Similarity=0.336 Sum_probs=44.6
Q ss_pred EEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 707 VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 707 ~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
+++..||+++- .+..-+++.++|++|++.|++++++||-....+..+.+++|+
T Consensus 2 i~~DlDGTLl~----~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~ 54 (225)
T TIGR02461 2 IFTDLDGTLLP----PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGV 54 (225)
T ss_pred EEEeCCCCCcC----CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 34556777653 456667899999999999999999999999999999999997
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0032 Score=66.96 Aligned_cols=115 Identities=15% Similarity=0.118 Sum_probs=81.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeEe-c----cC--hhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS-G----VK--PNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~a-r----~~--Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+... .+.+ . .. |+-=..+++.+.-....+.||
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~I 174 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYV 174 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEe
Confidence 5789999999999999999999999999998888899998531 2222 1 12 222344555555556679999
Q ss_pred cCCcccHHHHHhCCeeE-Ee--CCC--h-HHHHhhcCEEEeCCChhHHHHHH
Q 002310 795 GDGINDAAALASSHIGV-AM--GGG--V-GAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGI-am--g~g--t-~~a~~aADivL~~~~l~~l~~~i 840 (937)
||..||..|-++|++-. ++ |.. . ......+|+++ +++..|...+
T Consensus 175 GDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 175 GDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred CCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 99999999999998764 33 221 1 12234588887 4566665443
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.004 Score=65.58 Aligned_cols=115 Identities=23% Similarity=0.255 Sum_probs=80.5
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--C--ceeEec-----cChhhH--HHHHHHHhcC-CCE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP--K--DKVLSG-----VKPNEK--KRFINELQND-ENV 790 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~--~--~~v~ar-----~~Pe~K--~~iV~~Lq~~-G~~ 790 (937)
.++.||+.+.++.|++.|+++.++|+-.......+.+..|+. . +.+++. -.|+.. ....+.+.-. ...
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 479999999999999999999999999999999999999986 2 233332 224222 2223333222 257
Q ss_pred EEEEcCCcccHHHHHhCCeeE--EeCCCh----HHHHhhcCEEEeCCChhHHHHH
Q 002310 791 VAMVGDGINDAAALASSHIGV--AMGGGV----GAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdVGI--amg~gt----~~a~~aADivL~~~~l~~l~~~ 839 (937)
+.||||+.+|..|-++|++.. ++..|. ......+|.++ +++..+..+
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 999999999999999999986 332222 12223467666 457666554
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0019 Score=66.82 Aligned_cols=86 Identities=17% Similarity=0.166 Sum_probs=66.2
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--ee------EeccChhhHHHHHHHHhcCCCEEEE
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KV------LSGVKPNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v------~ar~~Pe~K~~iV~~Lq~~G~~Vam 793 (937)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+..- .+ ..+-.|+--..+++.+.-....+.|
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~ 183 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAM 183 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEE
Confidence 455677789999999999999999999999999999999998521 11 1122344445566666555667999
Q ss_pred EcCCcccHHHHHhC
Q 002310 794 VGDGINDAAALASS 807 (937)
Q Consensus 794 vGDG~NDa~AL~~A 807 (937)
|||..+|+.|-++|
T Consensus 184 vGD~~~Di~aA~~a 197 (197)
T TIGR01548 184 VGDTVDDIITGRKA 197 (197)
T ss_pred EeCCHHHHHHHHhC
Confidence 99999999887765
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0049 Score=67.14 Aligned_cols=85 Identities=14% Similarity=0.155 Sum_probs=63.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEec-c----ChhhHHHHHHHHhcCC----CEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSG-V----KPNEKKRFINELQNDE----NVV 791 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~ar-~----~Pe~K~~iV~~Lq~~G----~~V 791 (937)
++-|++.++++.|++.|+++.++|+.....+..+-+..|+.. +.+++. - .|+ ..-+.+.+++.| ..+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~-p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPY-PWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCC-hHHHHHHHHHcCCCCCcce
Confidence 567999999999999999999999999998888877766532 233322 1 232 122334444433 469
Q ss_pred EEEcCCcccHHHHHhCCe
Q 002310 792 AMVGDGINDAAALASSHI 809 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdV 809 (937)
.||||..+|..|-+.|++
T Consensus 180 l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred EEEcCcHHHHHHHHHCCC
Confidence 999999999999999987
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0023 Score=68.01 Aligned_cols=83 Identities=20% Similarity=0.374 Sum_probs=64.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCC--C--ceeEeccCh--hhHHHHHHHHhcCCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGD----KKNSAEYVASLVGIP--K--DKVLSGVKP--NEKKRFINELQNDENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD----~~~tA~~iA~~~GI~--~--~~v~ar~~P--e~K~~iV~~Lq~~G~~Vam 793 (937)
.+.+++++.++.|++.|+++.++|+- ...|+..+.+..|++ . ..+++.-++ .+|... +++.| .+.|
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~~~---l~~~~-i~I~ 189 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKTQW---LKKKN-IRIF 189 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHHHH---HHhcC-CeEE
Confidence 57788999999999999999999994 577999999999993 2 244444332 445554 44444 4899
Q ss_pred EcCCcccHHHHHhCCee
Q 002310 794 VGDGINDAAALASSHIG 810 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVG 810 (937)
+||..+|..|-++|++-
T Consensus 190 IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 190 YGDSDNDITAAREAGAR 206 (237)
T ss_pred EcCCHHHHHHHHHcCCc
Confidence 99999999999999874
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0042 Score=59.74 Aligned_cols=104 Identities=17% Similarity=0.241 Sum_probs=73.2
Q ss_pred EEEEEECCEEEEEEEe-----cCcCChhHHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHcCCCCceeEe--
Q 002310 706 LVYVGVDNMLAGLIYV-----EDRIRDDAAHVVNSLSSQGIGVYMLSGDK--------KNSAEYVASLVGIPKDKVLS-- 770 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l-----~D~lr~~a~e~I~~L~~aGI~v~mlTGD~--------~~tA~~iA~~~GI~~~~v~a-- 770 (937)
.+.+..|+++..-... +-++.|++.++++.|++.|+++.++|+.. ......+.+.+|+....++.
T Consensus 2 ~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 81 (132)
T TIGR01662 2 GVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACP 81 (132)
T ss_pred EEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 3556677777632111 23678999999999999999999999988 77888899999986332221
Q ss_pred -ccCh--hhHHHHHHHHh-cCCCEEEEEcC-CcccHHHHHhCCe
Q 002310 771 -GVKP--NEKKRFINELQ-NDENVVAMVGD-GINDAAALASSHI 809 (937)
Q Consensus 771 -r~~P--e~K~~iV~~Lq-~~G~~VamvGD-G~NDa~AL~~AdV 809 (937)
...| +-=..+++.++ -....+.|||| -.+|..+.+++++
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 1233 21134444442 34467999999 5999999988875
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0026 Score=64.53 Aligned_cols=109 Identities=14% Similarity=0.153 Sum_probs=76.4
Q ss_pred CCeEEEEEECCEEEEEEEecC----cCChhHHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHcCCCCceeE-
Q 002310 703 NQSLVYVGVDNMLAGLIYVED----RIRDDAAHVVNSLSSQGIGVYMLSGDKKN--------SAEYVASLVGIPKDKVL- 769 (937)
Q Consensus 703 ~~~~~~v~~~~~~lG~i~l~D----~lr~~a~e~I~~L~~aGI~v~mlTGD~~~--------tA~~iA~~~GI~~~~v~- 769 (937)
+.+.+++.+|+++.|-..+.+ ++.|++++++++|++.|+++.++|..... .....-+..|+. .++
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~--~~~~ 80 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD--DIYL 80 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC--EEEE
Confidence 567888999999877644443 36899999999999999999999987641 233445567876 333
Q ss_pred e---------ccChhh--HHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 002310 770 S---------GVKPNE--KKRFINELQNDENVVAMVGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 770 a---------r~~Pe~--K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIam 813 (937)
+ ...|.- =..+++.+.-.-+.+.||||..+|..|-++|++-...
T Consensus 81 ~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 81 CPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 1 123322 2444455544445799999999999999999876543
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0058 Score=70.64 Aligned_cols=133 Identities=12% Similarity=0.109 Sum_probs=87.1
Q ss_pred EEEEEECCEEEEEEEecC--cCChhHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc----------------
Q 002310 706 LVYVGVDNMLAGLIYVED--RIRDDAAHVV-NSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---------------- 766 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D--~lr~~a~e~I-~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~---------------- 766 (937)
.++...|++++.- .| .+.+...+++ +++++.|+..+..||-.......+.++.++...
T Consensus 11 lI~sDLDGTLL~~---~~~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~ 87 (413)
T PLN02382 11 MIVSDLDHTMVDH---HDPENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGES 87 (413)
T ss_pred EEEEcCCCcCcCC---CCccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCC
Confidence 4444567777632 13 3443445555 889999999999999999999999988886211
Q ss_pred -----------------------------------------e--eE---------------------------------e
Q 002310 767 -----------------------------------------K--VL---------------------------------S 770 (937)
Q Consensus 767 -----------------------------------------~--v~---------------------------------a 770 (937)
. ++ -
T Consensus 88 ~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~l 167 (413)
T PLN02382 88 MVPDHGWVEYLNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDL 167 (413)
T ss_pred CccChhHHHHHhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEE
Confidence 0 00 1
Q ss_pred ccChh--hHHHHHHHHhcC----C---CEEEEEcCCcccHHHHHhCC-eeEEeCCChHHHHhhc--------CEEEeC-C
Q 002310 771 GVKPN--EKKRFINELQND----E---NVVAMVGDGINDAAALASSH-IGVAMGGGVGAASEVA--------SVVLMG-N 831 (937)
Q Consensus 771 r~~Pe--~K~~iV~~Lq~~----G---~~VamvGDG~NDa~AL~~Ad-VGIamg~gt~~a~~aA--------DivL~~-~ 831 (937)
.+.|. .|..-++.|.+. | ..|.++||+.||.+||+.++ .||+|+++.+..++.+ +++..+ .
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~ 247 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATER 247 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCC
Confidence 11222 255555555333 2 36899999999999999999 6999999988888642 555443 3
Q ss_pred ChhHHHHHHH
Q 002310 832 RLSQLLVALE 841 (937)
Q Consensus 832 ~l~~l~~~i~ 841 (937)
+-..|.++++
T Consensus 248 ~~~GI~~al~ 257 (413)
T PLN02382 248 CAAGIIQAIG 257 (413)
T ss_pred CccHHHHHHH
Confidence 3444554443
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0073 Score=65.16 Aligned_cols=86 Identities=15% Similarity=0.140 Sum_probs=65.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEec-----cChhhHHHHHHHHhcCC----CEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSG-----VKPNEKKRFINELQNDE----NVV 791 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~ar-----~~Pe~K~~iV~~Lq~~G----~~V 791 (937)
++.|++.+.++.|++.|+++.++|+.....+..+-++.|+.. +.+++. -.|+ ..-+.+.+++.| ..+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~-p~~~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPA-PWMALKNAIELGVYDVAAC 177 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCC-HHHHHHHHHHcCCCCchhe
Confidence 567999999999999999999999999999999989888753 233332 1232 223344444443 459
Q ss_pred EEEcCCcccHHHHHhCCee
Q 002310 792 AMVGDGINDAAALASSHIG 810 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVG 810 (937)
.||||..+|..|-++|.+-
T Consensus 178 l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred EEECCcHHHHHHHHHCCCe
Confidence 9999999999999999864
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0062 Score=63.86 Aligned_cols=92 Identities=13% Similarity=0.013 Sum_probs=73.1
Q ss_pred cCChhHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCC---CCceeEe-------------ccChhhHHHHHHHH-h
Q 002310 724 RIRDDAAHVV-NSLSSQGIGVYMLSGDKKNSAEYVASLVGI---PKDKVLS-------------GVKPNEKKRFINEL-Q 785 (937)
Q Consensus 724 ~lr~~a~e~I-~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI---~~~~v~a-------------r~~Pe~K~~iV~~L-q 785 (937)
.+.|++.+.| +.+++.|++++++|+-....+..+++.+|+ + ..+.. .+.-++|..-++.. .
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~ 173 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIG 173 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceEEEEEEEEEccEECCccCCChHHHHHHHHHhC
Confidence 5589999999 678999999999999999999999999994 3 12211 14568998877754 3
Q ss_pred cCCCEEEEEcCCcccHHHHHhCCeeEEeCCC
Q 002310 786 NDENVVAMVGDGINDAAALASSHIGVAMGGG 816 (937)
Q Consensus 786 ~~G~~VamvGDG~NDa~AL~~AdVGIamg~g 816 (937)
......-+=||..||.|+|+.|+-.++++..
T Consensus 174 ~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 174 TPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred CCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 3334455789999999999999999999743
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0078 Score=65.07 Aligned_cols=55 Identities=18% Similarity=0.212 Sum_probs=47.3
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
+++...||+++- -.+..-+.++++|++|++.||.+++.||-.......+.+++|+
T Consensus 3 LIftDLDGTLLd---~~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl 57 (302)
T PRK12702 3 LVLSSLDGSLLD---LEFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRL 57 (302)
T ss_pred EEEEeCCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 566777888763 2455778899999999999999999999999999999999997
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0079 Score=65.19 Aligned_cols=111 Identities=20% Similarity=0.210 Sum_probs=77.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cCh--hhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~P--e~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|+-....+..+-+.+|+.. +.+++. -.| +-=...++.+.-....++||
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~I 188 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVF 188 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEE
Confidence 578999999999999999999999999999999999999853 223221 133 22233444444445579999
Q ss_pred cCCcccHHHHHhCCeeE-Ee-CCChHHHHhhcCEEEeCCChhHH
Q 002310 795 GDGINDAAALASSHIGV-AM-GGGVGAASEVASVVLMGNRLSQL 836 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGI-am-g~gt~~a~~aADivL~~~~l~~l 836 (937)
||..+|..|-++|++-. ++ |.........+|.++ ++++.+
T Consensus 189 gDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 189 GNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred cCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 99999999999999843 33 322222233577765 445554
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0027 Score=67.43 Aligned_cols=82 Identities=18% Similarity=0.284 Sum_probs=62.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCC--ceeEeccC-----hhhHHHHHHHHhcCCCEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGD----KKNSAEYVASLVGIPK--DKVLSGVK-----PNEKKRFINELQNDENVVA 792 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD----~~~tA~~iA~~~GI~~--~~v~ar~~-----Pe~K~~iV~~Lq~~G~~Va 792 (937)
.+.+++++.++.|++.|+++.++|+- ...++..+.+.+|++. +.+++.-. | +|. ..+++.| .+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp-~~~---~~l~~~~-i~i 188 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQY-TKT---QWIQDKN-IRI 188 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCC-CHH---HHHHhCC-CeE
Confidence 34555999999999999999999996 7779999999999964 23333222 2 243 3455555 479
Q ss_pred EEcCCcccHHHHHhCCee
Q 002310 793 MVGDGINDAAALASSHIG 810 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdVG 810 (937)
|+||..||..+-++|.+-
T Consensus 189 ~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 189 HYGDSDNDITAAKEAGAR 206 (237)
T ss_pred EEeCCHHHHHHHHHCCCC
Confidence 999999999999988764
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.011 Score=68.32 Aligned_cols=149 Identities=14% Similarity=0.273 Sum_probs=117.7
Q ss_pred EEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc---------------------------
Q 002310 714 MLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--------------------------- 766 (937)
Q Consensus 714 ~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--------------------------- 766 (937)
.|.|++.+..+.+++....|+.|-++-|+.+-.+-.++...+-.|+++||...
T Consensus 816 If~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~ 895 (1354)
T KOG4383|consen 816 IFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAA 895 (1354)
T ss_pred hhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhc
Confidence 48999999999999999999999999999999999999999999999998210
Q ss_pred --------------------------------------------------------------------------eeEecc
Q 002310 767 --------------------------------------------------------------------------KVLSGV 772 (937)
Q Consensus 767 --------------------------------------------------------------------------~v~ar~ 772 (937)
-.|..+
T Consensus 896 qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDc 975 (1354)
T KOG4383|consen 896 QKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDC 975 (1354)
T ss_pred cCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCC
Confidence 257889
Q ss_pred ChhhHHHHHHHHhcCCCEEEEEcCCcccHHH--HHhCCeeEEeCC-------------ChHHHH-hhc------------
Q 002310 773 KPNEKKRFINELQNDENVVAMVGDGINDAAA--LASSHIGVAMGG-------------GVGAAS-EVA------------ 824 (937)
Q Consensus 773 ~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~A--L~~AdVGIamg~-------------gt~~a~-~aA------------ 824 (937)
+|+.--+.|+.+|+.|++|+.+|...|-... .-+||++|++-. .+.+.. ++.
T Consensus 976 npeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqL 1055 (1354)
T KOG4383|consen 976 NPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQL 1055 (1354)
T ss_pred CHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccc
Confidence 9999999999999999999999999886543 368999998831 111111 122
Q ss_pred -----CEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 825 -----SVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNI 862 (937)
Q Consensus 825 -----DivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Ni 862 (937)
|+-+-...+-++..+|+-+|..+.-+|+.+.|.+...+
T Consensus 1056 naL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL 1098 (1354)
T KOG4383|consen 1056 NALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQL 1098 (1354)
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 22232333556788888899999999998888765443
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0074 Score=63.22 Aligned_cols=91 Identities=14% Similarity=0.063 Sum_probs=71.4
Q ss_pred cCChhHHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHcCC---CCceeEec-------------cChhhHHHHHHHH-h
Q 002310 724 RIRDDAAHVVN-SLSSQGIGVYMLSGDKKNSAEYVASLVGI---PKDKVLSG-------------VKPNEKKRFINEL-Q 785 (937)
Q Consensus 724 ~lr~~a~e~I~-~L~~aGI~v~mlTGD~~~tA~~iA~~~GI---~~~~v~ar-------------~~Pe~K~~iV~~L-q 785 (937)
.++|++.+.|+ .++++|++++++|+=....++.+|+..++ .. .+..+ +.-++|.+-++.. .
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~ 172 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-LIASQIERGNGGWVLPLRCLGHEKVAQLEQKIG 172 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-EEEEEeEEeCCceEcCccCCChHHHHHHHHHhC
Confidence 57999999995 88999999999999999999999998544 21 12111 4558998877754 3
Q ss_pred cCCCEEEEEcCCcccHHHHHhCCeeEEeCC
Q 002310 786 NDENVVAMVGDGINDAAALASSHIGVAMGG 815 (937)
Q Consensus 786 ~~G~~VamvGDG~NDa~AL~~AdVGIamg~ 815 (937)
......-+=||..||.|||+.||-.++++.
T Consensus 173 ~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 173 SPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred CChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 233345688999999999999999999963
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.013 Score=59.68 Aligned_cols=115 Identities=23% Similarity=0.230 Sum_probs=72.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCceeEe----------ccC--hhh
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVGIPKDKVLS----------GVK--PNE 776 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~---------------~tA~~iA~~~GI~~~~v~a----------r~~--Pe~ 776 (937)
.+.||+.+++++|++.|+++.++|..+. .....+-+..|+.-+.++. ... |+-
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~~~~~~~~~~KP~p~~ 108 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPHHPEDGCDCRKPKPGM 108 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcCCCCCHHH
Confidence 4678999999999999999999998763 1122334456763223331 122 232
Q ss_pred HHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeE-EeCCChH---HHHhhc--CEEEeCCChhHHHHHH
Q 002310 777 KKRFINELQNDENVVAMVGDGINDAAALASSHIGV-AMGGGVG---AASEVA--SVVLMGNRLSQLLVAL 840 (937)
Q Consensus 777 K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGI-amg~gt~---~a~~aA--DivL~~~~l~~l~~~i 840 (937)
-...++.+.-....+.||||..+|..+-++|++-. .+..|.. .....+ |.++ +++..+..++
T Consensus 109 ~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~el~~~l 176 (181)
T PRK08942 109 LLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLADLPQAL 176 (181)
T ss_pred HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHHHHHHH
Confidence 34444555444567999999999999999999743 2223321 112234 7765 4576666554
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.011 Score=69.60 Aligned_cols=116 Identities=16% Similarity=0.219 Sum_probs=82.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-c-----cChhhHHHHHHHHhcCCCEEEEEc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G-----VKPNEKKRFINELQNDENVVAMVG 795 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r-----~~Pe~K~~iV~~Lq~~G~~VamvG 795 (937)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.. +.+++ . -.|+-=...++.++ -..+.|||
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~VG 407 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAVVG 407 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEEEe
Confidence 688999999999999999999999999999999999999852 12222 1 23432222333332 35799999
Q ss_pred CCcccHHHHHhCCe-eEEeC--CChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002310 796 DGINDAAALASSHI-GVAMG--GGVGAASEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 796 DG~NDa~AL~~AdV-GIamg--~gt~~a~~aADivL~~~~l~~l~~~i~~~ 843 (937)
|..+|..|-+.|.+ .|++. .+.+.....+|+++ +++..+..++...
T Consensus 408 Ds~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~ 456 (459)
T PRK06698 408 DRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTV 456 (459)
T ss_pred CCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHH
Confidence 99999999999997 44443 22222234578886 5677777665433
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0058 Score=60.37 Aligned_cols=89 Identities=18% Similarity=0.155 Sum_probs=70.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC----CCCceeEe------------------ccChhhHHHHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG----IPKDKVLS------------------GVKPNEKKRFI 781 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~G----I~~~~v~a------------------r~~Pe~K~~iV 781 (937)
.++|+-++.++.+++.++.++++|+--..-...+-++++ |...++.+ ..--.+|...|
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI 152 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVI 152 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhH
Confidence 589999999999999999999999888877777777766 32111110 11135899999
Q ss_pred HHHhcCCCEEEEEcCCcccHHHHHhCCeeEE
Q 002310 782 NELQNDENVVAMVGDGINDAAALASSHIGVA 812 (937)
Q Consensus 782 ~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIa 812 (937)
+.|++..+.+-|+|||+.|..|-+.+|+=.|
T Consensus 153 ~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 153 HELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred HHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 9999999999999999999998888777654
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.017 Score=69.36 Aligned_cols=56 Identities=16% Similarity=0.219 Sum_probs=45.9
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
.+++...|++|+.- .+..-+.+.++|++|+++|+.+++.||-.......+++++|+
T Consensus 417 KLIfsDLDGTLLd~---d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 417 KIVYTDLDGTLLNP---LTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred eEEEEECcCCCcCC---CCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 56777788887531 223445789999999999999999999999999999999986
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.014 Score=61.52 Aligned_cols=105 Identities=15% Similarity=0.122 Sum_probs=71.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-ceeEec-----cChh--hHHHHHHHHhcCCCEEEEEc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-DKVLSG-----VKPN--EKKRFINELQNDENVVAMVG 795 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~-~~v~ar-----~~Pe--~K~~iV~~Lq~~G~~VamvG 795 (937)
++.|++.++++.|++.|+++.++|+.....+...-+..|+.. +.+.+. ..|+ -=....+.+.-....+.|||
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~ig 162 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVE 162 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEe
Confidence 578999999999999999999999988777777777788742 122221 2232 11223333333346799999
Q ss_pred CCcccHHHHHhCCee-EEeCCCh-HHHHhhcCEEE
Q 002310 796 DGINDAAALASSHIG-VAMGGGV-GAASEVASVVL 828 (937)
Q Consensus 796 DG~NDa~AL~~AdVG-Iamg~gt-~~a~~aADivL 828 (937)
|..+|..|-++|++- |++..+. ......+|.++
T Consensus 163 Ds~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~ 197 (218)
T PRK11587 163 DAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVL 197 (218)
T ss_pred cchhhhHHHHHCCCEEEEECCCCchhhhccCCEEe
Confidence 999999999999984 5554332 22334577765
|
|
| >KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.008 Score=51.57 Aligned_cols=56 Identities=29% Similarity=0.385 Sum_probs=47.4
Q ss_pred EEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcC
Q 002310 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCG 196 (937)
Q Consensus 130 l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~G 196 (937)
...-.|||.+|+..|++.++.++||.+++++...++++|.-+ .++ ..+.+.+++.|
T Consensus 8 v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~---~~p--------~~vl~~l~k~~ 63 (73)
T KOG1603|consen 8 VLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGN---VDP--------VKLLKKLKKTG 63 (73)
T ss_pred EEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEe---cCH--------HHHHHHHHhcC
Confidence 344589999999999999999999999999999999999865 333 67788887755
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.014 Score=59.01 Aligned_cols=105 Identities=21% Similarity=0.227 Sum_probs=76.4
Q ss_pred hCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCCceeEeccChhhHHH
Q 002310 701 LMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDK-KNSAEYVASLVGIPKDKVLSGVKPNEKKR 779 (937)
Q Consensus 701 ~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~-~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~ 779 (937)
..+...+.+..|+++.-. =...+-+++.++++.|++.|+++.++|+-+ ...+..+.+.+|+. .+.....|... -
T Consensus 22 ~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~--~~~~~~KP~p~-~ 96 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP--VLPHAVKPPGC-A 96 (170)
T ss_pred HCCCCEEEEecCCccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE--EEcCCCCCChH-H
Confidence 356677888888775421 133678999999999999999999999988 67788888999985 23333455332 2
Q ss_pred HHHHHhc---CCCEEEEEcCCc-ccHHHHHhCCee
Q 002310 780 FINELQN---DENVVAMVGDGI-NDAAALASSHIG 810 (937)
Q Consensus 780 iV~~Lq~---~G~~VamvGDG~-NDa~AL~~AdVG 810 (937)
+-..+++ ....++||||.. .|..+-+.|++-
T Consensus 97 ~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 97 FRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred HHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 2233333 345699999998 799999999874
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.008 Score=66.61 Aligned_cols=91 Identities=14% Similarity=0.122 Sum_probs=72.8
Q ss_pred ecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEe--------------ccChhhHHHHHHH
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS--------------GVKPNEKKRFINE 783 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~a--------------r~~Pe~K~~iV~~ 783 (937)
..+++.+++.++++.|++.|+++.++||-...++..+.+.+|+.. +.+.+ +-.|+-+...++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 578999999999999999999999999999999999999888863 01111 2335566666666
Q ss_pred Hhc-CCCEEEEEcCCcccHHHHHhCCeeE
Q 002310 784 LQN-DENVVAMVGDGINDAAALASSHIGV 811 (937)
Q Consensus 784 Lq~-~G~~VamvGDG~NDa~AL~~AdVGI 811 (937)
+-. .-..+.||||..+|+.+-+.|.+-.
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 533 3367999999999999999999874
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0082 Score=62.07 Aligned_cols=87 Identities=18% Similarity=0.201 Sum_probs=65.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-----ccChhhH--HHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-----GVKPNEK--KRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-----r~~Pe~K--~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++.|+++.++|+-+......+.+.+|+.. +.+++ ...|+.. ..+.+.+.-.-..+.||
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~v 171 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLFV 171 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEEE
Confidence 578999999999999999999999999898999999999842 12322 2244322 33444444344678999
Q ss_pred cCCcccHHHHHhCCee
Q 002310 795 GDGINDAAALASSHIG 810 (937)
Q Consensus 795 GDG~NDa~AL~~AdVG 810 (937)
||+.+|+.+-++|++-
T Consensus 172 gD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 172 ASNPWDLGGAKKFGFK 187 (198)
T ss_pred eCCHHHHHHHHHCCCc
Confidence 9999999998888764
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.022 Score=61.26 Aligned_cols=110 Identities=11% Similarity=0.192 Sum_probs=77.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ce-eEecc----Ch--hhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DK-VLSGV----KP--NEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~-v~ar~----~P--e~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++.|+++.++|+-....+..+-+.+||.+ +. +.+.. .| +--....+.++-....+.||
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~v 187 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVF 187 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEE
Confidence 578899999999999999999999999999999999999853 12 22222 23 22344445554445679999
Q ss_pred cCCcccHHHHHhCCeeEE-eCCC-h--HHHHhhcCEEEeCCChhH
Q 002310 795 GDGINDAAALASSHIGVA-MGGG-V--GAASEVASVVLMGNRLSQ 835 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIa-mg~g-t--~~a~~aADivL~~~~l~~ 835 (937)
||..+|..|-++|++-.. +..| . +.....+|.++. ++..
T Consensus 188 gDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~--~~~e 230 (248)
T PLN02770 188 EDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIK--DYED 230 (248)
T ss_pred cCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEec--cchh
Confidence 999999999999987532 2222 1 222346787773 4444
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.011 Score=59.72 Aligned_cols=94 Identities=13% Similarity=0.126 Sum_probs=68.9
Q ss_pred EecCcCChhHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcCCC---------C--ceeEeccCh-hhH--HHHHHHH
Q 002310 720 YVEDRIRDDAAHVVNSLSSQGIGVYMLSGD-KKNSAEYVASLVGIP---------K--DKVLSGVKP-NEK--KRFINEL 784 (937)
Q Consensus 720 ~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD-~~~tA~~iA~~~GI~---------~--~~v~ar~~P-e~K--~~iV~~L 784 (937)
.-+-++.|++.++++.|+++|+++.++|+- ....+..+-+.+|+. . +.+.+.-.| ..| ..+.+.+
T Consensus 41 ~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~ 120 (174)
T TIGR01685 41 GTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKV 120 (174)
T ss_pred CCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHh
Confidence 344467899999999999999999999965 889999999999985 2 233322222 222 2345555
Q ss_pred hcC------CCEEEEEcCCcccHHHHHhCCeeEEe
Q 002310 785 QND------ENVVAMVGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 785 q~~------G~~VamvGDG~NDa~AL~~AdVGIam 813 (937)
.+. -..+.||||...|+.|-++|.+-...
T Consensus 121 ~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 121 NKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred hhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 433 25799999999999999998886544
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.013 Score=60.96 Aligned_cols=52 Identities=12% Similarity=0.308 Sum_probs=43.4
Q ss_pred EEEEECCEEEEEEEecC--cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 002310 707 VYVGVDNMLAGLIYVED--RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG 762 (937)
Q Consensus 707 ~~v~~~~~~lG~i~l~D--~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~G 762 (937)
+++..|++++. .+ ++.+.+.+++++|++.|++++++||-.......+.++++
T Consensus 2 i~~D~DgTL~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 2 LFFDLDGTLLD----PNAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred EEEeCcCCCcC----CCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 44566777764 22 578999999999999999999999999999999988755
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.024 Score=57.74 Aligned_cols=118 Identities=20% Similarity=0.332 Sum_probs=93.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------------------------
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------------------------- 766 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------------------------- 766 (937)
++-|++.++++.|++. ...+++|---.+-+.++|+.+|++..
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 5679999999999876 66777787888889999999998431
Q ss_pred -----eeEeccChhhHHHHHHHHhcC------------------CCEEEEEcCCcccHHHHHhCC-e-eEEeC-CChHHH
Q 002310 767 -----KVLSGVKPNEKKRFINELQND------------------ENVVAMVGDGINDAAALASSH-I-GVAMG-GGVGAA 820 (937)
Q Consensus 767 -----~v~ar~~Pe~K~~iV~~Lq~~------------------G~~VamvGDG~NDa~AL~~Ad-V-GIamg-~gt~~a 820 (937)
.+|.|+.|.+-.+|++..+.- ....++|||.+.|+.||+.+. - |+|+. +|.+-|
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 578888887766666655432 234688999999999999884 2 36666 788888
Q ss_pred HhhcCEEEeCCChhHHHHHHHH
Q 002310 821 SEVASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 821 ~~aADivL~~~~l~~l~~~i~~ 842 (937)
...||+.+...+...+..+|++
T Consensus 242 l~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccceEEeccchhhhhHHHHH
Confidence 8889999999999888888876
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.018 Score=60.48 Aligned_cols=91 Identities=18% Similarity=0.219 Sum_probs=66.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-----ccChhhH--HHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-----GVKPNEK--KRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-----r~~Pe~K--~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++.|++++++|+-+.......-+.+|+.. +.+++ +..|+.. ..+.+.+.-....+.||
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~i 173 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMV 173 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEEE
Confidence 578999999999999999999999988888888889999852 12222 2344322 22333333334579999
Q ss_pred cCCc-ccHHHHHhCCe-eEEeC
Q 002310 795 GDGI-NDAAALASSHI-GVAMG 814 (937)
Q Consensus 795 GDG~-NDa~AL~~AdV-GIamg 814 (937)
||.. +|..+-++|++ .|.+.
T Consensus 174 gDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 174 GDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred CCChHHHHHHHHHCCCEEEEEC
Confidence 9998 99999999987 34444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.013 Score=62.07 Aligned_cols=92 Identities=14% Similarity=0.167 Sum_probs=66.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeE-ec----cChhh--HHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SG----VKPNE--KKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~-ar----~~Pe~--K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|.-+...+...-+..|+.+ +.++ +. -.|+- =....+.+.-....+.||
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~i 172 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLFI 172 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEEE
Confidence 678999999999999999999999998888888888889842 1222 22 23321 122233333334579999
Q ss_pred cCCcccHHHHHhCCee--EEeCC
Q 002310 795 GDGINDAAALASSHIG--VAMGG 815 (937)
Q Consensus 795 GDG~NDa~AL~~AdVG--Iamg~ 815 (937)
||..+|+.+-++|++. +++..
T Consensus 173 gDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 173 DDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred cCCHHHHHHHHHcCCeEEEEEeC
Confidence 9999999999999995 44543
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.024 Score=57.59 Aligned_cols=129 Identities=19% Similarity=0.230 Sum_probs=76.7
Q ss_pred EEEEEECCEEEEEEEe-----cCcCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCC
Q 002310 706 LVYVGVDNMLAGLIYV-----EDRIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVGIPK 765 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l-----~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~---------------~tA~~iA~~~GI~~ 765 (937)
.+++.+||+++---.. +=++.|++.++++.|+++|+++.++|.-+. .....+-.+.|+.-
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (176)
T TIGR00213 3 AIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL 82 (176)
T ss_pred EEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc
Confidence 4667777777520010 113468999999999999999999997653 12223444555542
Q ss_pred ceeE-e---------------ccChhhH--HHHHHHHhcCCCEEEEEcCCcccHHHHHhCCee--EEeCCChH---HHHh
Q 002310 766 DKVL-S---------------GVKPNEK--KRFINELQNDENVVAMVGDGINDAAALASSHIG--VAMGGGVG---AASE 822 (937)
Q Consensus 766 ~~v~-a---------------r~~Pe~K--~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVG--Iamg~gt~---~a~~ 822 (937)
+.++ + ...|+-. ....+.+.-....+.||||..+|..|-++|++. |.+..|.. ....
T Consensus 83 ~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~ 162 (176)
T TIGR00213 83 DGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAEN 162 (176)
T ss_pred cEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccc
Confidence 2332 1 1233221 222333333346789999999999999999985 34433322 1223
Q ss_pred hcCEEEeCCChhHH
Q 002310 823 VASVVLMGNRLSQL 836 (937)
Q Consensus 823 aADivL~~~~l~~l 836 (937)
.+|.++ +++..|
T Consensus 163 ~ad~~i--~~~~el 174 (176)
T TIGR00213 163 IADWVL--NSLADL 174 (176)
T ss_pred cCCEEe--ccHHHh
Confidence 478887 455544
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.043 Score=62.24 Aligned_cols=111 Identities=18% Similarity=0.201 Sum_probs=79.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cChh--hHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPN--EKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~Pe--~K~~iV~~Lq~~G~~Vamv 794 (937)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||.+ +.+++. -.|+ -=...++.++-....+.||
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~I 295 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVF 295 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 477999999999999999999999999999999999999853 123221 2332 2244555555456789999
Q ss_pred cCCcccHHHHHhCCeeEEe-CCChHHH-HhhcCEEEeCCChhHH
Q 002310 795 GDGINDAAALASSHIGVAM-GGGVGAA-SEVASVVLMGNRLSQL 836 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIam-g~gt~~a-~~aADivL~~~~l~~l 836 (937)
||..+|+.|-+.|++-... ..+.+.. ...+|+++ +++..+
T Consensus 296 GDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 296 GNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred cCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 9999999999999985432 2332222 23478775 456655
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.015 Score=58.04 Aligned_cols=89 Identities=21% Similarity=0.338 Sum_probs=69.5
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--CceeEec-----cCh--hhHHHHHHHHhcCCCEEE
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP--KDKVLSG-----VKP--NEKKRFINELQNDENVVA 792 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~--~~~v~ar-----~~P--e~K~~iV~~Lq~~G~~Va 792 (937)
..++.|++.+.++.|++.|++++++|+-.........+++|+. .+.+++. ..| +-=..+++.+.-....+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~ 154 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEIL 154 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEE
Confidence 3578899999999999999999999999999999999999986 2344332 123 222445555554567899
Q ss_pred EEcCCcccHHHHHhCCee
Q 002310 793 MVGDGINDAAALASSHIG 810 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdVG 810 (937)
||||..+|..+-++|++-
T Consensus 155 ~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 155 FVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEESSHHHHHHHHHTTSE
T ss_pred EEeCCHHHHHHHHHcCCe
Confidence 999999999999988764
|
... |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.047 Score=53.62 Aligned_cols=104 Identities=22% Similarity=0.270 Sum_probs=80.1
Q ss_pred HHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHH
Q 002310 699 EDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKK 778 (937)
Q Consensus 699 ~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~ 778 (937)
....|.+-+.+..|++++..= ....-|++++-++.++++|+++.++|-.++..+..+++.+|++ -++--..|--+
T Consensus 23 L~~~Gikgvi~DlDNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~--fi~~A~KP~~~- 97 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP--FIYRAKKPFGR- 97 (175)
T ss_pred HHHcCCcEEEEeccCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc--eeecccCccHH-
Confidence 445678888899999987643 3466788999999999999999999999999999999999997 55555667655
Q ss_pred HHHHHHhcC---CCEEEEEcCC-cccHHHHHhC
Q 002310 779 RFINELQND---ENVVAMVGDG-INDAAALASS 807 (937)
Q Consensus 779 ~iV~~Lq~~---G~~VamvGDG-~NDa~AL~~A 807 (937)
.+-+++++. -+.|+||||- .-|+-+=..|
T Consensus 98 ~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~ 130 (175)
T COG2179 98 AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRA 130 (175)
T ss_pred HHHHHHHHcCCChhHEEEEcchhhhhhhccccc
Confidence 455555554 4689999996 4565444443
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.026 Score=62.06 Aligned_cols=111 Identities=15% Similarity=0.197 Sum_probs=73.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC---CCc-eeEec-----cChhh--HHHHHHHHhcCCCEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI---PKD-KVLSG-----VKPNE--KKRFINELQNDENVVA 792 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI---~~~-~v~ar-----~~Pe~--K~~iV~~Lq~~G~~Va 792 (937)
++.|++.+.++.|++.|+++.++|+-+......+-+..++ ... .+++. ..|+- =..+.+.+.-....+.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 223 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCV 223 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEE
Confidence 5789999999999999999999999888888776665532 110 22211 12322 2334444444456799
Q ss_pred EEcCCcccHHHHHhCCeeEEeC-CC--hHHHHhhcCEEEeCCChhHH
Q 002310 793 MVGDGINDAAALASSHIGVAMG-GG--VGAASEVASVVLMGNRLSQL 836 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdVGIamg-~g--t~~a~~aADivL~~~~l~~l 836 (937)
||||..+|..|-++|++....- .| ..-....+|+++ +++..+
T Consensus 224 ~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l 268 (286)
T PLN02779 224 VVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDV 268 (286)
T ss_pred EEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhc
Confidence 9999999999999999765442 22 111123578876 445444
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.053 Score=67.73 Aligned_cols=65 Identities=14% Similarity=0.144 Sum_probs=49.8
Q ss_pred HHhCCCeEEEEEECCEEEEEEEe--cCcCChhHHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 699 EDLMNQSLVYVGVDNMLAGLIYV--EDRIRDDAAHVVNSLSS-QGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 699 ~~~~~~~~~~v~~~~~~lG~i~l--~D~lr~~a~e~I~~L~~-aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
+......++++..||+++....- ...+.+++.+++++|.+ .|+.|+++||.............++
T Consensus 487 y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l 554 (726)
T PRK14501 487 YRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPI 554 (726)
T ss_pred HHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCe
Confidence 33445688999999998864211 12367899999999999 6999999999999988877665553
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.03 Score=58.86 Aligned_cols=113 Identities=13% Similarity=0.244 Sum_probs=76.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cChhhH--HHHHHHH-hcCCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPNEK--KRFINEL-QNDENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~Pe~K--~~iV~~L-q~~G~~Vam 793 (937)
++.|++.+.++.|++. +++.++|+-....+..+.+++|+.. +.+++. ..|+.. ...++.+ .-....+.|
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~ 175 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLM 175 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEE
Confidence 5789999999999999 9999999999999999999999842 234332 134332 2334444 323356999
Q ss_pred EcCCc-ccHHHHHhCCe-eEEeC--CChHHHHhhcCEEEeCCChhHHHHH
Q 002310 794 VGDGI-NDAAALASSHI-GVAMG--GGVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 794 vGDG~-NDa~AL~~AdV-GIamg--~gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
|||.. +|..+-+.+++ .|.+. .........+|.++ +++..|..+
T Consensus 176 igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 223 (224)
T TIGR02254 176 IGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYEI 223 (224)
T ss_pred ECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHhh
Confidence 99998 89999999996 33332 22212223456555 456666543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.014 Score=59.48 Aligned_cols=85 Identities=15% Similarity=0.198 Sum_probs=59.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-----ccChhhH--HHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-----GVKPNEK--KRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-----r~~Pe~K--~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|+++|+++.++|+... +..+.+.+|+.. +.++. +-.|+-. ....+.+.-....+.||
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~v 164 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGI 164 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 6789999999999999999999996432 456788889852 12221 2233211 22333333233569999
Q ss_pred cCCcccHHHHHhCCee
Q 002310 795 GDGINDAAALASSHIG 810 (937)
Q Consensus 795 GDG~NDa~AL~~AdVG 810 (937)
||..+|+.+-++|++-
T Consensus 165 gD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 165 EDAQAGIEAIKAAGMF 180 (185)
T ss_pred ecCHHHHHHHHHcCCE
Confidence 9999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.026 Score=57.12 Aligned_cols=85 Identities=16% Similarity=0.250 Sum_probs=61.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeE-ec----cChh--hHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SG----VKPN--EKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~-ar----~~Pe--~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.. +.++ +. ..|+ -=..+.+.+.-....+.||
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~v 163 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFV 163 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEE
Confidence 678999999999999999999999988777 66666688842 2332 22 2232 2233444444445689999
Q ss_pred cCCcccHHHHHhCCe
Q 002310 795 GDGINDAAALASSHI 809 (937)
Q Consensus 795 GDG~NDa~AL~~AdV 809 (937)
||...|..+-+++.+
T Consensus 164 gD~~~di~aA~~~G~ 178 (183)
T TIGR01509 164 DDSPAGIEAAKAAGM 178 (183)
T ss_pred cCCHHHHHHHHHcCC
Confidence 999999999888876
|
HAD subfamilies caused by an overly broad single model. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.073 Score=53.01 Aligned_cols=88 Identities=19% Similarity=0.298 Sum_probs=65.6
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHH-----cCCCCceeEe--------------ccChhh-HH
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE---YVASL-----VGIPKDKVLS--------------GVKPNE-KK 778 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~---~iA~~-----~GI~~~~v~a--------------r~~Pe~-K~ 778 (937)
+|.+.++++++++++++.|++++.+||-....+. ...++ .+++...+++ .-.|++ |.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~ 104 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKI 104 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHH
Confidence 3788999999999999999999999999988874 44555 2343211111 233544 88
Q ss_pred HHHHHHhc-----CCCEEEEEcCCcccHHHHHhCCe
Q 002310 779 RFINELQN-----DENVVAMVGDGINDAAALASSHI 809 (937)
Q Consensus 779 ~iV~~Lq~-----~G~~VamvGDG~NDa~AL~~AdV 809 (937)
+.++.+++ ....++..||+.+|+.+-++++|
T Consensus 105 ~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 105 ACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 88888776 34677889999999999988765
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.027 Score=55.44 Aligned_cols=87 Identities=18% Similarity=0.280 Sum_probs=60.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCc-eeEec---------cChhhH-
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVGIPKD-KVLSG---------VKPNEK- 777 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~---------------~tA~~iA~~~GI~~~-~v~ar---------~~Pe~K- 777 (937)
++.|++.++++.|++.|+++.++|.... .....+.+.+|+... .+++. ..|+-+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~ 106 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL 106 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 4689999999999999999999998662 455667788998522 22221 134322
Q ss_pred -HHHHHHHhcCCCEEEEEcCCcccHHHHHhCCee
Q 002310 778 -KRFINELQNDENVVAMVGDGINDAAALASSHIG 810 (937)
Q Consensus 778 -~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVG 810 (937)
..+++.+.-....+.||||...|..+-+.+++-
T Consensus 107 ~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 107 ILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred HHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 223333332345799999999999998888763
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.053 Score=54.56 Aligned_cols=106 Identities=11% Similarity=0.129 Sum_probs=68.6
Q ss_pred CeEEEEEECCEEEEEEE----ecC--c---CChhHHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHcC
Q 002310 704 QSLVYVGVDNMLAGLIY----VED--R---IRDDAAHVVNSLSSQGIGVYMLSGDKKN------------SAEYVASLVG 762 (937)
Q Consensus 704 ~~~~~v~~~~~~lG~i~----l~D--~---lr~~a~e~I~~L~~aGI~v~mlTGD~~~------------tA~~iA~~~G 762 (937)
...+++..|++++-... ..+ + +-|++.++++.|++.|+++.++|.-... ....+.+.+|
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~g 92 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLK 92 (166)
T ss_pred CcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcC
Confidence 35677788888774221 112 2 3499999999999999999999965442 4567888999
Q ss_pred CCCceeEe-c----cChhhH--HHHHHHHh--cCCCEEEEEcCCc--------ccHHHHHhCCe
Q 002310 763 IPKDKVLS-G----VKPNEK--KRFINELQ--NDENVVAMVGDGI--------NDAAALASSHI 809 (937)
Q Consensus 763 I~~~~v~a-r----~~Pe~K--~~iV~~Lq--~~G~~VamvGDG~--------NDa~AL~~AdV 809 (937)
+....+.+ . -.|+.. ..+.+.+. -....+.||||.. +|..+-++|++
T Consensus 93 l~~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi 156 (166)
T TIGR01664 93 VPIQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGL 156 (166)
T ss_pred CCEEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCC
Confidence 86433322 1 123211 22333332 1235699999986 69988888766
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.1 Score=59.16 Aligned_cols=76 Identities=12% Similarity=0.241 Sum_probs=50.5
Q ss_pred HHHHhcCCCCcchhhHHHHHhCCCeEEEEEECCEEEEEEEecC--cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 002310 681 DWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVED--RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYV 757 (937)
Q Consensus 681 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D--~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~i 757 (937)
.|+.++-.....++....+.......+++.+||++.-+..--| .+-++.++++++|.+. ..|.++||-........
T Consensus 96 ~~~~~~p~al~~~~~~~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~ 173 (384)
T PLN02580 96 TWMLKYPSALTSFEQIANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYEL 173 (384)
T ss_pred HHHHhCcHHHHHHHHHHHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHH
Confidence 3555443333344455555555678888999999987552212 2356889999999887 48999999876655443
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.024 Score=57.72 Aligned_cols=86 Identities=16% Similarity=0.226 Sum_probs=61.7
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-----ccChhhH--HHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-----GVKPNEK--KRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-----r~~Pe~K--~~iV~~Lq~~G~~Vam 793 (937)
-++.|++.++++.|++.|+++.++|+- ..+..+-+..|+.. +.+++ +..|+.. ..+.+.+.-....+.|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~ 164 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVV 164 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 378999999999999999999999986 56778888889842 23332 2234322 1222333223356899
Q ss_pred EcCCcccHHHHHhCCee
Q 002310 794 VGDGINDAAALASSHIG 810 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVG 810 (937)
|||..+|..+-++|++-
T Consensus 165 IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 165 FEDALAGVQAARAAGMF 181 (185)
T ss_pred EeCcHhhHHHHHHCCCe
Confidence 99999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.062 Score=56.67 Aligned_cols=114 Identities=19% Similarity=0.235 Sum_probs=75.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ce-eEecc----ChhhH--HHHHHHHhcC-CCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DK-VLSGV----KPNEK--KRFINELQND-ENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~-v~ar~----~Pe~K--~~iV~~Lq~~-G~~Vam 793 (937)
++.|++.++++.|+ .|+++.++|......+...-+..|+.. +. +.+.- .|+.. ..+++.+.-. ...+.|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~ 173 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLM 173 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 47899999999999 689999999998888888888899842 12 33322 34321 2233333321 246999
Q ss_pred EcCCc-ccHHHHHhCCee-EEeC-CChH-HHHhhcCEEEeCCChhHHHHHH
Q 002310 794 VGDGI-NDAAALASSHIG-VAMG-GGVG-AASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 794 vGDG~-NDa~AL~~AdVG-Iamg-~gt~-~a~~aADivL~~~~l~~l~~~i 840 (937)
|||.. +|..+-++|++- |.+. .+.. .....+|.++ +++..+..++
T Consensus 174 vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 174 VGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred EcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 99998 799999999985 4443 2221 1112467766 4577666543
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.048 Score=58.94 Aligned_cols=83 Identities=19% Similarity=0.312 Sum_probs=63.4
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCCC---ceeEeccChhhHHHHHHHHhcCCCEEEEEc
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDK---KNSAEYVASLVGIPK---DKVLSGVKPNEKKRFINELQNDENVVAMVG 795 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~---~~tA~~iA~~~GI~~---~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvG 795 (937)
..++-|++.+.++.|++.|+++.++|+-. ...+...-+..|++. +.++.|-....|....+.+.+...+++|+|
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~Ivl~vG 195 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEIVLLFG 195 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCEEEEEC
Confidence 34677999999999999999999999965 344456667789953 456666444567777777766667899999
Q ss_pred CCcccHHHH
Q 002310 796 DGINDAAAL 804 (937)
Q Consensus 796 DG~NDa~AL 804 (937)
|-.+|....
T Consensus 196 D~~~Df~~~ 204 (266)
T TIGR01533 196 DNLLDFDDF 204 (266)
T ss_pred CCHHHhhhh
Confidence 999998543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.047 Score=62.61 Aligned_cols=110 Identities=17% Similarity=0.167 Sum_probs=73.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HcCCCC--ceeEe-----ccChh--hHHHHHHHHhcCCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS-LVGIPK--DKVLS-----GVKPN--EKKRFINELQNDENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~-~~GI~~--~~v~a-----r~~Pe--~K~~iV~~Lq~~G~~Vam 793 (937)
++.|++.+.++.|++.|+++.++|+-....+...-+ ..|+.. +.+++ +..|+ -=..+++.+.-..+.+.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~ 172 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLV 172 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 577999999999999999999999999888877665 678732 12222 12332 223344444434567999
Q ss_pred EcCCcccHHHHHhCCeeE-EeCCC--hHHHHhhcCEEEeCCChhH
Q 002310 794 VGDGINDAAALASSHIGV-AMGGG--VGAASEVASVVLMGNRLSQ 835 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVGI-amg~g--t~~a~~aADivL~~~~l~~ 835 (937)
|||..+|..|-++|++-. ++..+ .......+|.++ +++..
T Consensus 173 VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i--~sl~e 215 (382)
T PLN02940 173 IEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI--NSLLD 215 (382)
T ss_pred EeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe--CCHhH
Confidence 999999999999999864 33322 222333466665 34444
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.049 Score=61.31 Aligned_cols=88 Identities=19% Similarity=0.190 Sum_probs=62.4
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCceeE-ec---------cChhhH
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGD---------------KKNSAEYVASLVGIPKDKVL-SG---------VKPNEK 777 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD---------------~~~tA~~iA~~~GI~~~~v~-ar---------~~Pe~K 777 (937)
-++.|++.++++.|++.|+++.++|.- .......+.+..|+.-+.++ +- -.|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~~~~~sd~~~~rKP~-- 106 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLICPHFPEDNCSCRKPK-- 106 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEeCCcCcccCCCCCCC--
Confidence 367899999999999999999999982 24456678888888532332 21 1232
Q ss_pred HHHHHHHhc----CCCEEEEEcCCcccHHHHHhCCeeEE
Q 002310 778 KRFINELQN----DENVVAMVGDGINDAAALASSHIGVA 812 (937)
Q Consensus 778 ~~iV~~Lq~----~G~~VamvGDG~NDa~AL~~AdVGIa 812 (937)
-.++..+.+ ....+.||||+.+|..+-+.|.+-..
T Consensus 107 p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 107 TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 334433322 23679999999999999999988643
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.12 Score=55.27 Aligned_cols=98 Identities=17% Similarity=0.254 Sum_probs=66.9
Q ss_pred CeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHcCCCC---ceeEeccChhh-H
Q 002310 704 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE--YVASLVGIPK---DKVLSGVKPNE-K 777 (937)
Q Consensus 704 ~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~--~iA~~~GI~~---~~v~ar~~Pe~-K 777 (937)
...+.+..|+++ .-.+.+-|++.+++++|+++|+++.++|.-...... ...+++|+.. +.++ ++.+ .
T Consensus 8 ~~~~~~D~dG~l----~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii---~s~~~~ 80 (242)
T TIGR01459 8 YDVFLLDLWGVI----IDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMII---SSGEIA 80 (242)
T ss_pred CCEEEEeccccc----ccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEE---ccHHHH
Confidence 345556666544 456778999999999999999999999986655444 5668899974 2333 2222 1
Q ss_pred HHHHHH-Hhc---CCCEEEEEcCCcccHHHHHhCC
Q 002310 778 KRFINE-LQN---DENVVAMVGDGINDAAALASSH 808 (937)
Q Consensus 778 ~~iV~~-Lq~---~G~~VamvGDG~NDa~AL~~Ad 808 (937)
...++. +++ .+..+.|+||+.+|...+...+
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 81 VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 123332 333 2467999999999998886543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.062 Score=60.20 Aligned_cols=109 Identities=15% Similarity=0.162 Sum_probs=79.9
Q ss_pred EEEEEECCEEEEEEEecC--------cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCCCceeEeccC
Q 002310 706 LVYVGVDNMLAGLIYVED--------RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL----VGIPKDKVLSGVK 773 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D--------~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~----~GI~~~~v~ar~~ 773 (937)
++.+..|+++-|-+.-+| ++.+++.++++.|++.|+++.++|.-+...+..+-++ +|+...-......
T Consensus 5 ~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~ 84 (320)
T TIGR01686 5 VLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN 84 (320)
T ss_pred EEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe
Confidence 445555666666555555 4578999999999999999999999999999999998 8886321221233
Q ss_pred hhhHHHHHHHH----hcCCCEEEEEcCCcccHHHHHhCCeeEEeC
Q 002310 774 PNEKKRFINEL----QNDENVVAMVGDGINDAAALASSHIGVAMG 814 (937)
Q Consensus 774 Pe~K~~iV~~L----q~~G~~VamvGDG~NDa~AL~~AdVGIamg 814 (937)
++-|.+.++.+ .-.-..++||||...|..+.+++...+.+-
T Consensus 85 ~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 85 WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 34455444443 223368999999999999999999887553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.069 Score=52.60 Aligned_cols=83 Identities=20% Similarity=0.247 Sum_probs=57.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec----cChh--hHHHHHHHHhcCCCEEEEEc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG----VKPN--EKKRFINELQNDENVVAMVG 795 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar----~~Pe--~K~~iV~~Lq~~G~~VamvG 795 (937)
...+++.+.++.|++.|+++.++|+-....+....+.. +.. +.+++. ..|+ -=..+.+.+.-.. .++|||
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l~iG 141 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVLHVG 141 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEEEEe
Confidence 44589999999999999999999999988888887774 321 123322 2332 1122233333234 799999
Q ss_pred CCcccHHHHHhCC
Q 002310 796 DGINDAAALASSH 808 (937)
Q Consensus 796 DG~NDa~AL~~Ad 808 (937)
|..+|..|-++|.
T Consensus 142 Ds~~Di~aa~~aG 154 (154)
T TIGR01549 142 DNLNDIEGARNAG 154 (154)
T ss_pred CCHHHHHHHHHcc
Confidence 9999998887763
|
HAD subfamilies caused by an overly broad single model. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.077 Score=56.17 Aligned_cols=81 Identities=22% Similarity=0.288 Sum_probs=64.4
Q ss_pred cCChhHHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHcCCCCc------------------------eeEeccCh-hh
Q 002310 724 RIRDDAAHVVNSL--SSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------------KVLSGVKP-NE 776 (937)
Q Consensus 724 ~lr~~a~e~I~~L--~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------------~v~ar~~P-e~ 776 (937)
|+.|+.++.++.| ++.|+.+.++|-=|..--..+-+.-|+... +-+.++.| .=
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmC 150 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMC 150 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccc
Confidence 6788999999999 568999999999999999999999998421 11223334 47
Q ss_pred HHHHHHHHhcC----C---CEEEEEcCCcccH-HHH
Q 002310 777 KKRFINELQND----E---NVVAMVGDGINDA-AAL 804 (937)
Q Consensus 777 K~~iV~~Lq~~----G---~~VamvGDG~NDa-~AL 804 (937)
|..+++.+++. | .+|.+||||.||- |++
T Consensus 151 K~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 151 KGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred hHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 99999988775 4 6999999999996 444
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.15 Score=53.80 Aligned_cols=79 Identities=14% Similarity=0.178 Sum_probs=59.1
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCCC-ceeEeccC-hhh------HHHHHHHHhcCCC-E
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNS---AEYVASLVGIPK-DKVLSGVK-PNE------KKRFINELQNDEN-V 790 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~t---A~~iA~~~GI~~-~~v~ar~~-Pe~------K~~iV~~Lq~~G~-~ 790 (937)
-|.-|++.+.++.|++.|++|+++||-.+.. +..--++.|++. +.++-|-. .+. |.+.=+.+.++|+ +
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrI 198 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRI 198 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhCCceE
Confidence 4788999999999999999999999998765 334445678863 45555531 112 6666667777776 6
Q ss_pred EEEEcCCcccH
Q 002310 791 VAMVGDGINDA 801 (937)
Q Consensus 791 VamvGDG~NDa 801 (937)
++.+||-.+|.
T Consensus 199 v~~iGDq~sDl 209 (229)
T TIGR01675 199 WGNIGDQWSDL 209 (229)
T ss_pred EEEECCChHHh
Confidence 77899999886
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.086 Score=55.57 Aligned_cols=90 Identities=18% Similarity=0.224 Sum_probs=59.2
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH-HHHHHcCCCC--ceeEecc-------Chh--hHHHHHHHHh---cC
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE-YVASLVGIPK--DKVLSGV-------KPN--EKKRFINELQ---ND 787 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~-~iA~~~GI~~--~~v~ar~-------~Pe--~K~~iV~~Lq---~~ 787 (937)
-++.|++.+.|+.|++.|+++.++||-...... ...+..++.. +.+++.- .|+ -=...++.+. -.
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 156 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVD 156 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCC
Confidence 357899999999999999999999997765433 2333334421 1222222 222 1133334442 22
Q ss_pred CCEEEEEcCCcccHHHHHhCCeeEE
Q 002310 788 ENVVAMVGDGINDAAALASSHIGVA 812 (937)
Q Consensus 788 G~~VamvGDG~NDa~AL~~AdVGIa 812 (937)
...+.||||...|+.|-++|++-..
T Consensus 157 ~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 157 PGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred ccceEEEeccHhhHHHHHHCCCeEE
Confidence 3579999999999999999998543
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.13 Score=55.30 Aligned_cols=61 Identities=26% Similarity=0.296 Sum_probs=41.2
Q ss_pred hHHHHHHHHhcC----CCEEEEEcCCcccHHHHHhC--------CeeEEeCCChHHHHhhcCEEEeCCChhHHHHHH
Q 002310 776 EKKRFINELQND----ENVVAMVGDGINDAAALASS--------HIGVAMGGGVGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 776 ~K~~iV~~Lq~~----G~~VamvGDG~NDa~AL~~A--------dVGIamg~gt~~a~~aADivL~~~~l~~l~~~i 840 (937)
+|...++.+.++ ...++|+||+.||.+|++.+ ..+|.|+.|. .+..|++++- +...+...+
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~L 239 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEFL 239 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHHH
Confidence 455555544332 24689999999999999999 4788885332 3456888774 566665554
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.089 Score=54.50 Aligned_cols=85 Identities=16% Similarity=0.231 Sum_probs=59.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-c----cChhh--HHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G----VKPNE--KKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r----~~Pe~--K~~iV~~Lq~~G~~Vamv 794 (937)
++-|++.++++.|++.|+++.++|+-... ...+.+.+|+.. +.++. . ..|+- =..+++.+.-....+.||
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~I 183 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHI 183 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEE
Confidence 57799999999999999999999975544 467778888842 12222 1 13432 122333333334679999
Q ss_pred cCCc-ccHHHHHhCCe
Q 002310 795 GDGI-NDAAALASSHI 809 (937)
Q Consensus 795 GDG~-NDa~AL~~AdV 809 (937)
||.. +|..+-++|++
T Consensus 184 gD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 184 GDSLRNDYQGARAAGW 199 (203)
T ss_pred CCCchHHHHHHHHcCC
Confidence 9997 89988888765
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.087 Score=52.72 Aligned_cols=88 Identities=18% Similarity=0.226 Sum_probs=61.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCcee-Ee-----cc----ChhhHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGD---------------KKNSAEYVASLVGIPKDKV-LS-----GV----KPNEKK 778 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD---------------~~~tA~~iA~~~GI~~~~v-~a-----r~----~Pe~K~ 778 (937)
++-|++.+++++|++.|+++.++|-- .......+.+..|+.-+.+ ++ .. .|. .
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~~~~~~~~KP~--~ 106 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFPDDNCDCRKPK--I 106 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCCCCCCCCCCCC--H
Confidence 45689999999999999999999974 2456677888889862223 33 11 232 2
Q ss_pred HHHHH-HhcC---CCEEEEEcCCcccHHHHHhCCeeEEe
Q 002310 779 RFINE-LQND---ENVVAMVGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 779 ~iV~~-Lq~~---G~~VamvGDG~NDa~AL~~AdVGIam 813 (937)
.+++. +++. ...+.||||..+|..+-++|.+-...
T Consensus 107 ~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 107 KLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 23332 2333 34699999999999999998876443
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.14 Score=51.29 Aligned_cols=98 Identities=23% Similarity=0.283 Sum_probs=76.2
Q ss_pred hCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCC--eEEEEcCC-------CHHHHHHHHHHcCCCCcee-Ee
Q 002310 701 LMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGI--GVYMLSGD-------KKNSAEYVASLVGIPKDKV-LS 770 (937)
Q Consensus 701 ~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI--~v~mlTGD-------~~~tA~~iA~~~GI~~~~v-~a 770 (937)
..|...+.+..|+++.. --++++-|+..+.+++|++.+. +|.++|-- +...|+.+++.+||+ .+ +.
T Consensus 38 ~~Gik~li~DkDNTL~~--~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--vl~h~ 113 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTP--PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--VLRHR 113 (168)
T ss_pred hcCceEEEEcCCCCCCC--CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc--EEEeC
Confidence 45667777888887532 4678899999999999999987 49999976 488999999999996 43 34
Q ss_pred ccChhhHHHHHHHHhcC-----CCEEEEEcCC-cccHH
Q 002310 771 GVKPNEKKRFINELQND-----ENVVAMVGDG-INDAA 802 (937)
Q Consensus 771 r~~Pe~K~~iV~~Lq~~-----G~~VamvGDG-~NDa~ 802 (937)
.-.|.-..++.+.++.+ -+.++||||= .-|+-
T Consensus 114 ~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 114 AKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred CCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 46897777888888765 5679999995 34443
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.12 Score=49.56 Aligned_cols=83 Identities=10% Similarity=0.097 Sum_probs=58.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcC-------CCC---ceeEeccChhhH--HHHHHHHh--cCC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGD-KKNSAEYVASLVG-------IPK---DKVLSGVKPNEK--KRFINELQ--NDE 788 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD-~~~tA~~iA~~~G-------I~~---~~v~ar~~Pe~K--~~iV~~Lq--~~G 788 (937)
++.+++.+.++.|++.|+++.++|+- .+..+..+-+..+ +.. ..+.++-.|+-+ ...++.+. -..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p 108 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKP 108 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCc
Confidence 58999999999999999999999999 7888878777777 321 123332344333 22333333 334
Q ss_pred CEEEEEcCCcccHHHHHh
Q 002310 789 NVVAMVGDGINDAAALAS 806 (937)
Q Consensus 789 ~~VamvGDG~NDa~AL~~ 806 (937)
..+.||||...|.-+++.
T Consensus 109 ~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 109 KSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ceEEEECCCHhHHHHHHh
Confidence 789999999988776653
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.13 Score=54.21 Aligned_cols=38 Identities=26% Similarity=0.298 Sum_probs=31.0
Q ss_pred hHHHHHHHHhc----CCCEEEEEcCCcccHHHHHhCCeeEEe
Q 002310 776 EKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 776 ~K~~iV~~Lq~----~G~~VamvGDG~NDa~AL~~AdVGIam 813 (937)
.|..-++.+.+ ....|+++||+.||.+||+.|+.|||+
T Consensus 179 ~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 179 SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 57766666533 245799999999999999999999996
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.13 Score=54.11 Aligned_cols=93 Identities=11% Similarity=0.177 Sum_probs=65.8
Q ss_pred ecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CCCC--ceeE---eccChhh--HHHHHHHHhcCCCE
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV---GIPK--DKVL---SGVKPNE--KKRFINELQNDENV 790 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~---GI~~--~~v~---ar~~Pe~--K~~iV~~Lq~~G~~ 790 (937)
++-++.||+.+++++|+++|+++.++|..+......+-+.. ++.+ +.+| ....|+- =..+++.+.-....
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e 171 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPRE 171 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhH
Confidence 44579999999999999999999999998888777766654 3311 0111 1123322 23445555444467
Q ss_pred EEEEcCCcccHHHHHhCCeeEEe
Q 002310 791 VAMVGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdVGIam 813 (937)
++||||...|+.|-++|++-...
T Consensus 172 ~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 172 ILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred EEEEeCCHHHHHHHHHcCCEEEE
Confidence 99999999999999999986544
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.079 Score=52.20 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=65.4
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEec-cChhhHHHHHHHHhc---CCCEEEEE
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSG-VKPNEKKRFINELQN---DENVVAMV 794 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~ar-~~Pe~K~~iV~~Lq~---~G~~Vamv 794 (937)
.-++||++.+.++.|+ .++++.+.|.=+...+..+-+.+++.. +.++++ -....|-.+.+.+++ ....+.||
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i 121 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIII 121 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEE
Confidence 3367999999999999 579999999999999999999999853 233332 111222225444444 34689999
Q ss_pred cCCcccHHHHHhCCeeEE
Q 002310 795 GDGINDAAALASSHIGVA 812 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIa 812 (937)
||..+|..+-++|.|-|.
T Consensus 122 ~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 122 DDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ECCHHHhhcCccCEEEec
Confidence 999999988777755443
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.083 Score=56.80 Aligned_cols=54 Identities=22% Similarity=0.295 Sum_probs=46.6
Q ss_pred hhHHHHHHHHhcCCCEEEEEcC----CcccHHHHHhC-CeeEEeCCChHHHHhhcCEEE
Q 002310 775 NEKKRFINELQNDENVVAMVGD----GINDAAALASS-HIGVAMGGGVGAASEVASVVL 828 (937)
Q Consensus 775 e~K~~iV~~Lq~~G~~VamvGD----G~NDa~AL~~A-dVGIamg~gt~~a~~aADivL 828 (937)
-.|..-++.|.+.-..|+++|| |.||.+||+.| -.|+++++..+..+..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 5899999999887788999999 99999999987 788999888888888776543
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.85 E-value=1.5 Score=49.51 Aligned_cols=63 Identities=11% Similarity=0.162 Sum_probs=48.4
Q ss_pred hHHHHHhCCCeEEEEEECCEEEEEEEecC--cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 002310 695 EVEMEDLMNQSLVYVGVDNMLAGLIYVED--RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA 758 (937)
Q Consensus 695 ~~~~~~~~~~~~~~v~~~~~~lG~i~l~D--~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA 758 (937)
...........++++..||+|+-++.-.| .+-++..++|++|. .|+.++++||-.......+.
T Consensus 102 ~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 102 QIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred HHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 33333344567788889999987665434 47889999999999 78999999999988887664
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.71 Score=47.41 Aligned_cols=57 Identities=23% Similarity=0.340 Sum_probs=44.4
Q ss_pred CeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002310 704 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 704 ~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~ 764 (937)
..+++...|+++++ =+.+ . ..+.+.+.+|+++|+.|+.+|.-....-...-+.+|+.
T Consensus 7 ~~lIFtDlD~TLl~-~~ye--~-~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 7 PLLIFTDLDGTLLP-HSYE--W-QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ceEEEEcccCcccC-CCCC--C-CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 35677788888877 2222 2 24678999999999999999988888778888888873
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=92.54 E-value=0.18 Score=52.53 Aligned_cols=88 Identities=16% Similarity=0.203 Sum_probs=57.6
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHcCCCC--ceeEec-----cChhhH--HHHHHHHhcCCCEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNS--AEYVASLVGIPK--DKVLSG-----VKPNEK--KRFINELQNDENVV 791 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~t--A~~iA~~~GI~~--~~v~ar-----~~Pe~K--~~iV~~Lq~~G~~V 791 (937)
-++.|++.+.++.|++.|+++.++|...... ........++.. +.+++. ..|+-. ..+.+.+.-....+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~ 172 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEEC 172 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 3678999999999999999999999865433 332233344421 133321 244322 23334443334568
Q ss_pred EEEcCCcccHHHHHhCCee
Q 002310 792 AMVGDGINDAAALASSHIG 810 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVG 810 (937)
+||||...|+.+-++|++-
T Consensus 173 l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 173 VFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred EEEcCCHHHHHHHHHcCCE
Confidence 9999999999999999884
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.49 E-value=0.59 Score=60.65 Aligned_cols=111 Identities=14% Similarity=0.161 Sum_probs=77.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEe-----ccChhh--HHHHHHHHhcCCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS-----GVKPNE--KKRFINELQNDENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~a-----r~~Pe~--K~~iV~~Lq~~G~~Vam 793 (937)
.+-|++.+.++.|+++|+++.++|+-....+..+-+..|+.. +.+++ +..|+. =....+.+.-....+.|
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~ 240 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVV 240 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEE
Confidence 467999999999999999999999999999998889999851 22222 223332 23444444444567999
Q ss_pred EcCCcccHHHHHhCCe-eEEeCCC---hHHHHhhcCEEEeCCChhHH
Q 002310 794 VGDGINDAAALASSHI-GVAMGGG---VGAASEVASVVLMGNRLSQL 836 (937)
Q Consensus 794 vGDG~NDa~AL~~AdV-GIamg~g---t~~a~~aADivL~~~~l~~l 836 (937)
|||..+|+.|-++|.+ -|++..+ .+.....+|.++ +++..+
T Consensus 241 IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi--~~l~el 285 (1057)
T PLN02919 241 IEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIR--KDIGNI 285 (1057)
T ss_pred EcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEE--CChHHC
Confidence 9999999999999988 3344322 233344677777 445543
|
|
| >COG4907 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.46 E-value=0.089 Score=58.76 Aligned_cols=28 Identities=43% Similarity=0.807 Sum_probs=11.3
Q ss_pred cccCCcCCCCCCCCCCCCCCCCCCCCCC
Q 002310 71 MSSCAASFGAAGGSAGGDVGGGGGGGGG 98 (937)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 98 (937)
.|++++|..++.+|||+|+.||+.||||
T Consensus 564 ysa~a~S~~~~~~GGG~G~~gGg~GGGG 591 (595)
T COG4907 564 YSAIASSRRSSSSGGGGGFSGGGSGGGG 591 (595)
T ss_pred hhcccccccCCCCCCCCCcCCCCCCCCC
Confidence 4444444444333333333344444333
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=92.34 E-value=0.25 Score=45.28 Aligned_cols=85 Identities=20% Similarity=0.313 Sum_probs=54.9
Q ss_pred EEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCC--CceeEeccChhhHHHHHHHHhc--CCCE
Q 002310 718 LIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA---SLVGIP--KDKVLSGVKPNEKKRFINELQN--DENV 790 (937)
Q Consensus 718 ~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA---~~~GI~--~~~v~ar~~Pe~K~~iV~~Lq~--~G~~ 790 (937)
++...+++=|++.++|+.|+++|++++++|-....+...++ +.+|++ .++++ +|-+ ...+.|++ .+.+
T Consensus 8 vl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~---ts~~--~~~~~l~~~~~~~~ 82 (101)
T PF13344_consen 8 VLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEII---TSGM--AAAEYLKEHKGGKK 82 (101)
T ss_dssp TSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEE---EHHH--HHHHHHHHHTTSSE
T ss_pred EeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEE---ChHH--HHHHHHHhcCCCCE
Confidence 44567888999999999999999999999988755544444 667874 22343 2222 23334444 5789
Q ss_pred EEEEcCCcccHHHHHhCC
Q 002310 791 VAMVGDGINDAAALASSH 808 (937)
Q Consensus 791 VamvGDG~NDa~AL~~Ad 808 (937)
|.++|.. .....++.++
T Consensus 83 v~vlG~~-~l~~~l~~~G 99 (101)
T PF13344_consen 83 VYVLGSD-GLREELREAG 99 (101)
T ss_dssp EEEES-H-HHHHHHHHTT
T ss_pred EEEEcCH-HHHHHHHHcC
Confidence 9999875 5555666554
|
... |
| >TIGR02052 MerP mercuric transport protein periplasmic component | Back alignment and domain information |
|---|
Probab=91.99 E-value=0.76 Score=40.05 Aligned_cols=65 Identities=32% Similarity=0.481 Sum_probs=49.7
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccc
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (937)
+..+.+.|+.|..|...++..+...+++....++....+..+.++...... ..+...+++.||..
T Consensus 24 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~ 88 (92)
T TIGR02052 24 TVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNV--------KALTEATTDAGYPS 88 (92)
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHhcCCCe
Confidence 456779999999999999999999999988999998888777765432222 34445556677764
|
This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=91.50 E-value=0.48 Score=52.79 Aligned_cols=102 Identities=10% Similarity=0.167 Sum_probs=67.1
Q ss_pred CCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCC--CceeEeccChhhH
Q 002310 703 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA---SLVGIP--KDKVLSGVKPNEK 777 (937)
Q Consensus 703 ~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA---~~~GI~--~~~v~ar~~Pe~K 777 (937)
....+++..||++. -.+.+=|++.++|+.|++.|++++++|+....+...++ +.+|+. .+.|+.... -.
T Consensus 27 ~~~~~~~D~DGtl~----~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~--~~ 100 (311)
T PLN02645 27 SVETFIFDCDGVIW----KGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSF--AA 100 (311)
T ss_pred hCCEEEEeCcCCeE----eCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHH--HH
Confidence 45567777787654 35667799999999999999999999999977776666 567874 224432221 11
Q ss_pred HHHHHHHhc-CCCEEEEEcCCcccHHHHHhCCeeE
Q 002310 778 KRFINELQN-DENVVAMVGDGINDAAALASSHIGV 811 (937)
Q Consensus 778 ~~iV~~Lq~-~G~~VamvGDG~NDa~AL~~AdVGI 811 (937)
...++...- .++. .++++...|..+++.+++=+
T Consensus 101 ~~~l~~~~~~~~~~-V~viG~~~~~~~l~~~Gi~~ 134 (311)
T PLN02645 101 AAYLKSINFPKDKK-VYVIGEEGILEELELAGFQY 134 (311)
T ss_pred HHHHHhhccCCCCE-EEEEcCHHHHHHHHHCCCEE
Confidence 222222211 1344 55555678999999887644
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=91.21 E-value=0.6 Score=48.06 Aligned_cols=86 Identities=16% Similarity=0.214 Sum_probs=55.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-------ceeEeccChhhHHHHHH-HHhcCC-CEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-------DKVLSGVKPNEKKRFIN-ELQNDE-NVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~-------~~v~ar~~Pe~K~~iV~-~Lq~~G-~~Vamv 794 (937)
++.|++.++++.|++.+ +.+++|.-+..+....-+.+++.. ..+.++.... |-++++ .+++.| ..++||
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~-kp~~~~~a~~~~~~~~~v~v 151 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDES-KEKLFIKAKEKYGDRVVCFV 151 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcc-cHHHHHHHHHHhCCCcEEEe
Confidence 47899999999999875 566777654445444556666631 1222333221 334333 333333 458899
Q ss_pred cCCcccHHHHHhC--CeeE
Q 002310 795 GDGINDAAALASS--HIGV 811 (937)
Q Consensus 795 GDG~NDa~AL~~A--dVGI 811 (937)
||..+|..|-++| ++-.
T Consensus 152 gDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 152 DDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred CCCHHHHHHHHHHHcCCcE
Confidence 9999999999999 8854
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=90.61 E-value=0.61 Score=47.45 Aligned_cols=84 Identities=14% Similarity=0.197 Sum_probs=61.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec---------cChhhH--HHHHHHHhcCCCE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG---------VKPNEK--KRFINELQNDENV 790 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar---------~~Pe~K--~~iV~~Lq~~G~~ 790 (937)
++.+++.++++.|+ .+++++|.-+...+..+.+..|+.. +.+++. ..|+.. ..+++.+......
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 47789999999998 4799999998999999999999842 233332 244322 3344444444567
Q ss_pred EEEEcCCcccHHHHHhCCee
Q 002310 791 VAMVGDGINDAAALASSHIG 810 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdVG 810 (937)
++||||...|..+-++|++-
T Consensus 161 ~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 161 AIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred eEEEeCCHHHHHHHHHcCCE
Confidence 89999999999988888764
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.56 E-value=0.93 Score=46.64 Aligned_cols=91 Identities=22% Similarity=0.231 Sum_probs=66.9
Q ss_pred cCChhHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCC-------------------------ceeEeccCh-hh
Q 002310 724 RIRDDAAHVVNSLSSQGI-GVYMLSGDKKNSAEYVASLVGIPK-------------------------DKVLSGVKP-NE 776 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI-~v~mlTGD~~~tA~~iA~~~GI~~-------------------------~~v~ar~~P-e~ 776 (937)
|+-|+..++|+.+++.|- .++++|--|.---..+-+..||.. .+-+.++-| -=
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmC 163 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMC 163 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhh
Confidence 677899999999999996 999999999998889999988720 011222222 24
Q ss_pred HHHHHHHHhcCC-------CEEEEEcCCcccH-HHHHhCCeeEEeC
Q 002310 777 KKRFINELQNDE-------NVVAMVGDGINDA-AALASSHIGVAMG 814 (937)
Q Consensus 777 K~~iV~~Lq~~G-------~~VamvGDG~NDa-~AL~~AdVGIamg 814 (937)
|..++..++..+ .++-++|||.||. |.++...--++|-
T Consensus 164 Kg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 164 KGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 666766665432 2799999999995 7777766666773
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=90.29 E-value=1.3 Score=55.92 Aligned_cols=62 Identities=11% Similarity=0.143 Sum_probs=47.9
Q ss_pred HHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHH
Q 002310 699 EDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSL-SSQGIGVYMLSGDKKNSAEYVASL 760 (937)
Q Consensus 699 ~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L-~~aGI~v~mlTGD~~~tA~~iA~~ 760 (937)
+.....+.+++..||+++-.-...-.+-++..+++++| ++.|+.|+++||....+....-..
T Consensus 591 y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 591 YKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred HHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 44445688889999998844333335668999999997 778999999999999988776644
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.23 E-value=0.74 Score=47.58 Aligned_cols=88 Identities=17% Similarity=0.265 Sum_probs=58.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH-HHcCCCC--cee-Eec----cChhhH--HHHHHHHhcCCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA-SLVGIPK--DKV-LSG----VKPNEK--KRFINELQNDENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA-~~~GI~~--~~v-~ar----~~Pe~K--~~iV~~Lq~~G~~Vam 793 (937)
++.|++.++++.|++.|+++.++|.-+.......- +..++.. +.+ .+. ..|+-. ..+++.+.-....+.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 47899999999999999999999987766554332 2224321 122 221 234221 2334444334467899
Q ss_pred EcCCcccHHHHHhCCeeE
Q 002310 794 VGDGINDAAALASSHIGV 811 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVGI 811 (937)
|||...|+.+-++|++-.
T Consensus 164 vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 164 FDDNADNIEAANALGITS 181 (199)
T ss_pred eCCCHHHHHHHHHcCCEE
Confidence 999999999999988843
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=90.19 E-value=1.2 Score=47.76 Aligned_cols=75 Identities=23% Similarity=0.340 Sum_probs=51.4
Q ss_pred HHHHHHHHHhCCCeEEEE-cCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcC----CCEEEEEcCCcccHHH
Q 002310 729 AAHVVNSLSSQGIGVYML-SGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND----ENVVAMVGDGINDAAA 803 (937)
Q Consensus 729 a~e~I~~L~~aGI~v~ml-TGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~----G~~VamvGDG~NDa~A 803 (937)
..+.-+.|++.|+++.++ +++.. + ++.- ....|...|+.|+++ -..|..+||..||.+|
T Consensus 133 ~~~i~~~l~~~~l~~~~i~s~~~~---------l-----dilP--~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~m 196 (247)
T PF05116_consen 133 LEEIRARLRQRGLRVNVIYSNGRD---------L-----DILP--KGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEM 196 (247)
T ss_dssp HHHHHHHHHCCTCEEEEEECTCCE---------E-----EEEE--TT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHH
T ss_pred HHHHHHHHHHcCCCeeEEEcccee---------E-----EEcc--CCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHH
Confidence 455556678999998766 33321 1 1211 224688888888765 2357779999999999
Q ss_pred HHhCCeeEEeCCChHH
Q 002310 804 LASSHIGVAMGGGVGA 819 (937)
Q Consensus 804 L~~AdVGIamg~gt~~ 819 (937)
|..++-||.++++...
T Consensus 197 L~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 197 LEGGDHGVVVGNAQPE 212 (247)
T ss_dssp HCCSSEEEE-TTS-HH
T ss_pred HcCcCCEEEEcCCCHH
Confidence 9999999999977666
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.13 E-value=0.55 Score=49.33 Aligned_cols=88 Identities=16% Similarity=0.154 Sum_probs=62.4
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEec-c----Ch--hhHHHHHHHHhcCCCEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSG-V----KP--NEKKRFINELQNDENVVA 792 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~ar-~----~P--e~K~~iV~~Lq~~G~~Va 792 (937)
-++.|+++++++.| ++++.++|+.....+...-+..|+.. +.+++. - .| +-=....+.+.-....++
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 35678999999998 49999999999888888888888852 123332 1 22 222333333333345799
Q ss_pred EEcCCcccHHHHHhCCeeEEe
Q 002310 793 MVGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdVGIam 813 (937)
||||..+|..+-++|++-+..
T Consensus 164 ~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEE
Confidence 999999999999999987653
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.97 E-value=1.1 Score=45.67 Aligned_cols=84 Identities=15% Similarity=0.133 Sum_probs=59.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cChhh--HHHHHHHHhcCCCEEEEEc
Q 002310 725 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPNE--KKRFINELQNDENVVAMVG 795 (937)
Q Consensus 725 lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~Pe~--K~~iV~~Lq~~G~~VamvG 795 (937)
+-|+ .++++.|++. +++.++|+.....+..+-+..|+.. +.+++. -.|+. =....+.++-....+.|||
T Consensus 89 ~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ig 166 (188)
T PRK10725 89 PLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFE 166 (188)
T ss_pred CccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEe
Confidence 3454 6899999875 8999999999999999999999852 233322 12322 2333444443345688999
Q ss_pred CCcccHHHHHhCCee
Q 002310 796 DGINDAAALASSHIG 810 (937)
Q Consensus 796 DG~NDa~AL~~AdVG 810 (937)
|..+|+.+-++|++-
T Consensus 167 Ds~~di~aA~~aG~~ 181 (188)
T PRK10725 167 DADFGIQAARAAGMD 181 (188)
T ss_pred ccHhhHHHHHHCCCE
Confidence 999999999998874
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=87.84 E-value=0.53 Score=49.95 Aligned_cols=80 Identities=20% Similarity=0.340 Sum_probs=58.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCCC-ceeEeccCh--------hhHHHHHHHHhcCCC-E
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKN---SAEYVASLVGIPK-DKVLSGVKP--------NEKKRFINELQNDEN-V 790 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~---tA~~iA~~~GI~~-~~v~ar~~P--------e~K~~iV~~Lq~~G~-~ 790 (937)
+.=|++.+.++.+++.|++|..|||-+.. ....--++.|... +.++-|-.. +-|...-+.++++|+ +
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~I 194 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYRI 194 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCcE
Confidence 55578999999999999999999986543 4444556778754 445444322 238888888888865 7
Q ss_pred EEEEcCCcccHHH
Q 002310 791 VAMVGDGINDAAA 803 (937)
Q Consensus 791 VamvGDG~NDa~A 803 (937)
++++||-.+|...
T Consensus 195 i~~iGD~~~D~~~ 207 (229)
T PF03767_consen 195 IANIGDQLSDFSG 207 (229)
T ss_dssp EEEEESSGGGCHC
T ss_pred EEEeCCCHHHhhc
Confidence 7889999999754
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.87 E-value=2.1 Score=46.11 Aligned_cols=102 Identities=14% Similarity=0.264 Sum_probs=66.7
Q ss_pred EEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CC--CCceeEeccChhhHHHHHHHHhcC-CCE
Q 002310 717 GLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV---GI--PKDKVLSGVKPNEKKRFINELQND-ENV 790 (937)
Q Consensus 717 G~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~---GI--~~~~v~ar~~Pe~K~~iV~~Lq~~-G~~ 790 (937)
|.+.-.+.+-|++.++|+.|++.|++++++|+....+...+++++ |+ ..++++ +|.+ ...+.|++. +.+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~---ts~~--~~~~~L~~~~~~~ 84 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFY---TSAM--ATADFLRRQEGKK 84 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEe---cHHH--HHHHHHHhCCCCE
Confidence 344556788999999999999999999999999998888877774 66 333443 4433 334445543 567
Q ss_pred EEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCC
Q 002310 791 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR 832 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~ 832 (937)
|.++|.. --...|+.++ +.+. .+.+|.|+...+
T Consensus 85 v~~~g~~-~l~~~l~~~g--~~~~------~~~~~~Vvvg~~ 117 (248)
T PRK10444 85 AYVIGEG-ALIHELYKAG--FTIT------DINPDFVIVGET 117 (248)
T ss_pred EEEEcCH-HHHHHHHHCc--CEec------CCCCCEEEEeCC
Confidence 8889872 2234455443 3321 124566766544
|
|
| >COG2177 FtsX Cell division protein [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=84.96 E-value=67 Score=35.48 Aligned_cols=23 Identities=30% Similarity=0.248 Sum_probs=20.4
Q ss_pred ChhHHHHHHHHhhcCCCceEEEe
Q 002310 137 CGGCAASVKRILESQPQVSSASV 159 (937)
Q Consensus 137 C~~Ca~~ve~~L~~~~GV~~~~V 159 (937)
-..|...+++.++..|||++++.
T Consensus 70 ~~~~~~~v~~~i~~~~gV~~v~~ 92 (297)
T COG2177 70 DQDDAALVREKIEGIPGVKSVRF 92 (297)
T ss_pred ChHHHHHHHHHHhcCCCcceEEE
Confidence 38999999999999999988764
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=84.60 E-value=8.7 Score=43.33 Aligned_cols=77 Identities=17% Similarity=0.319 Sum_probs=50.2
Q ss_pred HHHHhcCCCCcchhhHHHHHhCCCeEEEEEECCEEEEEEEecCc--CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 002310 681 DWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDR--IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA 758 (937)
Q Consensus 681 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~--lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA 758 (937)
.|+..+-.....+++...........+++.+||+++-+.---|. +-++.+++|+.|.+ +..|.++||-.......+.
T Consensus 75 ~w~~~~p~a~~~~~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~-~~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 75 CWIKEHPSALNMFEEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK-CFPTAIVSGRCREKVSSFV 153 (354)
T ss_pred HHHHhCChHHHHHHHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc-CCCEEEEECCCHHHHHHHc
Confidence 35544322222333333333345578888999998865543343 56789999999994 5799999998877666554
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=84.19 E-value=5.3 Score=42.98 Aligned_cols=54 Identities=13% Similarity=0.144 Sum_probs=40.4
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCC
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG---DKKNSAEYVASLVGI 763 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTG---D~~~tA~~iA~~~GI 763 (937)
.+++..||++. -.+.+=+++.++|++|++.|++++++|| -.........+++|+
T Consensus 3 ~~~~D~DGtl~----~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~ 59 (249)
T TIGR01457 3 GYLIDLDGTMY----KGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDI 59 (249)
T ss_pred EEEEeCCCceE----cCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 34555666654 4566667999999999999999999997 456666666666776
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=83.61 E-value=6.3 Score=42.55 Aligned_cols=79 Identities=23% Similarity=0.294 Sum_probs=55.0
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHHHcCCCC-ceeEeccCh--------hhHHHHHHHHhcCC
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKN----SAEYVASLVGIPK-DKVLSGVKP--------NEKKRFINELQNDE 788 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~----tA~~iA~~~GI~~-~~v~ar~~P--------e~K~~iV~~Lq~~G 788 (937)
+.|.=|++.+..+.+++.|++|..+||-.+. |..++ ++.|... +.++-|-.. +.|...=+.+.++|
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eG 221 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEG 221 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcC
Confidence 3566789999999999999999999998854 33333 3568853 345555321 22444445556666
Q ss_pred C-EEEEEcCCcccH
Q 002310 789 N-VVAMVGDGINDA 801 (937)
Q Consensus 789 ~-~VamvGDG~NDa 801 (937)
+ +++.+||-.+|-
T Consensus 222 YrIv~~iGDq~sDl 235 (275)
T TIGR01680 222 YNIVGIIGDQWNDL 235 (275)
T ss_pred ceEEEEECCCHHhc
Confidence 5 778899999996
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=82.98 E-value=2.6 Score=45.89 Aligned_cols=60 Identities=17% Similarity=0.177 Sum_probs=50.2
Q ss_pred CCeEEEEEECCEEEEEEEecCc--CC-hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 002310 703 NQSLVYVGVDNMLAGLIYVEDR--IR-DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK 765 (937)
Q Consensus 703 ~~~~~~v~~~~~~lG~i~l~D~--lr-~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~ 765 (937)
-..++++..|++++.- +.+ +| |++.+++++|++.|+++.++|+-....+...-+++||..
T Consensus 125 ~~kvIvFDLDgTLi~~---~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 125 PPHVVVFDLDSTLITD---EEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cceEEEEecCCCCcCC---CCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 3457778889987543 433 66 999999999999999999999988888899999999973
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK13748 putative mercuric reductase; Provisional | Back alignment and domain information |
|---|
Probab=82.07 E-value=3.5 Score=49.94 Aligned_cols=67 Identities=34% Similarity=0.510 Sum_probs=53.1
Q ss_pred EEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 129 ~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
.+.++||+|.+|...++..+...+++..+.+++..++..+.+++. ... +.+...+++.||...+...
T Consensus 3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~-~~~--------~~i~~~i~~~g~~~~~~~~ 69 (561)
T PRK13748 3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVG-TSP--------DALTAAVAGLGYRATLADA 69 (561)
T ss_pred EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCC-CCH--------HHHHHHHHHcCCeeeccCc
Confidence 466899999999999999999999999999999999988877542 222 4455667888998665544
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=81.47 E-value=4.4 Score=43.84 Aligned_cols=81 Identities=17% Similarity=0.240 Sum_probs=52.0
Q ss_pred EEEEECCEEEEEEEecCc----CChhHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCC--CceeEeccChhhH
Q 002310 707 VYVGVDNMLAGLIYVEDR----IRDDAAHVVNSLSSQGIGVYMLSGDKKNS---AEYVASLVGIP--KDKVLSGVKPNEK 777 (937)
Q Consensus 707 ~~v~~~~~~lG~i~l~D~----lr~~a~e~I~~L~~aGI~v~mlTGD~~~t---A~~iA~~~GI~--~~~v~ar~~Pe~K 777 (937)
+++..||++. -.+. +=|++.++|++|+++|++++++||....+ .....+++|++ .++++ +|.+
T Consensus 4 i~~D~DGtl~----~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~---ts~~- 75 (257)
T TIGR01458 4 VLLDISGVLY----ISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVF---TPAP- 75 (257)
T ss_pred EEEeCCCeEE----eCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeE---cHHH-
Confidence 4455566553 4455 78899999999999999999999977665 44444567874 22332 3322
Q ss_pred HHHHHHHhcCCCEEEEEcC
Q 002310 778 KRFINELQNDENVVAMVGD 796 (937)
Q Consensus 778 ~~iV~~Lq~~G~~VamvGD 796 (937)
.....|++.+..+..+|.
T Consensus 76 -~~~~~l~~~~~~~~~~g~ 93 (257)
T TIGR01458 76 -AARQLLEEKQLRPMLLVD 93 (257)
T ss_pred -HHHHHHHhcCCCeEEEEC
Confidence 234455555555555554
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PLN03138 Protein TOC75; Provisional | Back alignment and domain information |
|---|
Probab=81.41 E-value=1.6 Score=53.83 Aligned_cols=15 Identities=13% Similarity=-0.004 Sum_probs=8.7
Q ss_pred HHhhcCCCceEEEee
Q 002310 146 RILESQPQVSSASVN 160 (937)
Q Consensus 146 ~~L~~~~GV~~~~Vn 160 (937)
--|+++.|-++..|+
T Consensus 137 ~~~~~~~~~~~~~vs 151 (796)
T PLN03138 137 VPLSKLSGFKRYKVS 151 (796)
T ss_pred EechhcCCcceEEEE
Confidence 346666776555554
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.57 E-value=2.9 Score=44.55 Aligned_cols=84 Identities=15% Similarity=0.236 Sum_probs=54.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--cee-Eec----cChhhH--HHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKV-LSG----VKPNEK--KRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v-~ar----~~Pe~K--~~iV~~Lq~~G~~Vamv 794 (937)
++-||+.++++.|++. +++.++|.-+.. .+..|+.. +.+ .+. ..|.-. ....+.+.-....+.||
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~V 186 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHV 186 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEE
Confidence 4668999999999975 899999975544 25677742 122 222 233322 22233333334579999
Q ss_pred cCC-cccHHHHHhCCeeEEe
Q 002310 795 GDG-INDAAALASSHIGVAM 813 (937)
Q Consensus 795 GDG-~NDa~AL~~AdVGIam 813 (937)
||. ..|+.+-++|++-...
T Consensus 187 GD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 187 GDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred cCCcHHHHHHHHHCCCeEEE
Confidence 999 5999999998875443
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=80.51 E-value=4.8 Score=44.07 Aligned_cols=97 Identities=15% Similarity=0.232 Sum_probs=62.0
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHcCCCC--ceeEeccChhhHHHH
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEY---VASLVGIPK--DKVLSGVKPNEKKRF 780 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~---iA~~~GI~~--~~v~ar~~Pe~K~~i 780 (937)
.+.+..||++. -.+.+=|++.++|++|++.|++++++|+....+... --+++|+.. ++++ +|..- .
T Consensus 4 ~~~~D~DGtl~----~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~---ts~~~--~ 74 (279)
T TIGR01452 4 GFIFDCDGVLW----LGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLF---SSALC--A 74 (279)
T ss_pred EEEEeCCCceE----cCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEe---cHHHH--H
Confidence 45566677663 357777889999999999999999999965433322 335678742 2332 22221 2
Q ss_pred HHHHhc---CCCEEEEEcCCcccHHHHHhCCeeEE
Q 002310 781 INELQN---DENVVAMVGDGINDAAALASSHIGVA 812 (937)
Q Consensus 781 V~~Lq~---~G~~VamvGDG~NDa~AL~~AdVGIa 812 (937)
.+.|++ .+..|.++|+. .....++.+++-+.
T Consensus 75 ~~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 75 ARLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred HHHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 234444 35789999985 34566776665543
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones | Back alignment and domain information |
|---|
Probab=80.49 E-value=7.9 Score=27.89 Aligned_cols=42 Identities=40% Similarity=0.631 Sum_probs=34.8
Q ss_pred EecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecC
Q 002310 131 DVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVS 172 (937)
Q Consensus 131 ~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~ 172 (937)
.+.++.|..|...++..+...+++.....++......+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (63)
T cd00371 3 SVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDP 44 (63)
T ss_pred eECCeEcHHHHHHHHHHHhcCCCEeEEEEEccCCEEEEEECC
Confidence 468899999999999999999998888888877776666643
|
HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=80.03 E-value=1.1 Score=44.94 Aligned_cols=89 Identities=8% Similarity=0.093 Sum_probs=62.1
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEeccC-hhhHHHHHHHHhcCC---CEEEEE
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSGVK-PNEKKRFINELQNDE---NVVAMV 794 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~ar~~-Pe~K~~iV~~Lq~~G---~~Vamv 794 (937)
.=..||++.+.++.|++. +++++.|--.+..|..+.+.++... ..+++|-. ...|-.+++.|..-| ..|.||
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiV 118 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIII 118 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEE
Confidence 336899999999999987 9999999999999999999999754 12333311 111222455554433 579999
Q ss_pred cCCcccHHHHHhCCeeEEe
Q 002310 795 GDGINDAAALASSHIGVAM 813 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIam 813 (937)
||...|..+=.++ ||-+
T Consensus 119 DD~~~~~~~~~~N--gI~i 135 (162)
T TIGR02251 119 DNSPYSYSLQPDN--AIPI 135 (162)
T ss_pred eCChhhhccCccC--Eeec
Confidence 9988887544444 4544
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 937 | ||||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-85 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 6e-82 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-78 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 9e-28 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 7e-27 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 3e-24 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 2e-23 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 6e-22 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 2e-17 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 7e-17 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 8e-17 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 2e-16 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 5e-15 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 2e-11 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 2e-08 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 2e-08 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 2e-08 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 5e-08 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-07 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-07 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 6e-07 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 1e-06 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 8e-05 | ||
| 2rml_A | 147 | Solution Structure Of The N-Terminal Soluble Domain | 3e-04 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 3e-04 | ||
| 1p6t_A | 151 | Structure Characterization Of The Water Soluble Reg | 4e-04 | ||
| 1opz_A | 76 | A Core Mutation Affecting The Folding Properties Of | 5e-04 |
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|2RML|A Chain A, Solution Structure Of The N-Terminal Soluble Domains Of Bacillus Subtilis Copa Length = 147 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|1P6T|A Chain A, Structure Characterization Of The Water Soluble Region Of P- Type Atpase Copa From Bacillus Subtilis Length = 151 | Back alignment and structure |
|
| >pdb|1OPZ|A Chain A, A Core Mutation Affecting The Folding Properties Of A Soluble Domain Of The Atpase Protein Copa From Bacillus Subtilis Length = 76 | Back alignment and structure |
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 937 | |||
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 100.0 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 100.0 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 100.0 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.94 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.93 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.89 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.62 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 99.59 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 99.56 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.44 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 99.43 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.33 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.29 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.27 | |
| 3dxs_X | 74 | Copper-transporting ATPase RAN1; CXXC motif, ferre | 99.27 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.23 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.21 | |
| 4a4j_A | 69 | Pacszia, cation-transporting ATPase PACS; hydrolas | 99.2 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.15 | |
| 3fry_A | 73 | Probable copper-exporting P-type ATPase A; transpo | 99.13 | |
| 3iwl_A | 68 | Copper transport protein ATOX1; beta-alpha-beta-BE | 99.1 | |
| 1osd_A | 72 | MERP, hypothetical protein MERP; mercury resistanc | 99.05 | |
| 2l3m_A | 71 | Copper-ION-binding protein; structural genomics, c | 99.05 | |
| 1kvi_A | 79 | Copper-transporting ATPase 1; menkes, Cu-protein, | 99.04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.03 | |
| 2g9o_A | 90 | Copper-transporting ATPase 1; menkes disease, solu | 99.03 | |
| 3cjk_B | 75 | Copper-transporting ATPase 1; HAH1, ATP7B, menkes | 99.02 | |
| 1y3j_A | 77 | Copper-transporting ATPase 1; ferrodoxin-like fold | 99.02 | |
| 1aw0_A | 72 | Menkes copper-transporting ATPase; copper-binding | 99.02 | |
| 1q8l_A | 84 | Copper-transporting ATPase 1; metal binding protei | 99.02 | |
| 1cpz_A | 68 | Protein (COPZ); copper chaperone, metal transport, | 99.0 | |
| 2xmw_A | 71 | PACS-N, cation-transporting ATPase PACS; hydrolase | 98.99 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.99 | |
| 2qif_A | 69 | Copper chaperone COPZ; tetranuclear Cu(I) cluster; | 98.99 | |
| 2kt2_A | 69 | Mercuric reductase; nmera, MERA, HMA domain, mercu | 98.98 | |
| 1mwy_A | 73 | ZNTA; open-faced beta-sandwich fold, beta-alpha-be | 98.98 | |
| 2ldi_A | 71 | Zinc-transporting ATPase; metal homeostasis, metal | 98.97 | |
| 1yg0_A | 66 | COP associated protein; open-faced beta-sandwich, | 98.96 | |
| 1opz_A | 76 | Potential copper-transporting ATPase; mutation, fo | 98.94 | |
| 1yjr_A | 75 | Copper-transporting ATPase 1; metallochaperone, pr | 98.94 | |
| 1jww_A | 80 | Potential copper-transporting ATPase; beta-alpha-b | 98.93 | |
| 1fvq_A | 72 | Copper-transporting ATPase; APO-CCC2A, hydrolase; | 98.92 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.9 | |
| 2ofg_X | 111 | Zinc-transporting ATPase; ferredoxin-like fold, be | 98.89 | |
| 2kkh_A | 95 | Putative heavy metal transporter; zinc transport, | 98.87 | |
| 1p6t_A | 151 | Potential copper-transporting ATPase; COPA, P-type | 98.86 | |
| 2ew9_A | 149 | Copper-transporting ATPase 2; copper trafficking, | 98.86 | |
| 1cc8_A | 73 | Protein (metallochaperone ATX1); copper transport, | 98.86 | |
| 2roe_A | 66 | Heavy metal binding protein; NMR {Thermus thermoph | 98.85 | |
| 2k2p_A | 85 | Uncharacterized protein ATU1203; putative metal-bi | 98.85 | |
| 2xmm_A | 64 | SSR2857 protein, ATX1; metal transport, copper hom | 98.84 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.82 | |
| 2crl_A | 98 | Copper chaperone for superoxide dismutase; SOD1, f | 98.82 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.81 | |
| 2kyz_A | 67 | Heavy metal binding protein; structural genomics, | 98.77 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.75 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.75 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.74 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.71 | |
| 2rop_A | 202 | Copper-transporting ATPase 2; wilson protein, mobi | 98.69 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.66 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.64 | |
| 2ew9_A | 149 | Copper-transporting ATPase 2; copper trafficking, | 98.58 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.56 | |
| 2aj0_A | 71 | Probable cadmium-transporting ATPase; ferrodoxin-l | 98.54 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.54 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.5 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.44 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.43 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.43 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.43 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.43 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.41 | |
| 1qup_A | 222 | Superoxide dismutase 1 copper chaperone; two domai | 98.4 | |
| 1p6t_A | 151 | Potential copper-transporting ATPase; COPA, P-type | 98.35 | |
| 2rop_A | 202 | Copper-transporting ATPase 2; wilson protein, mobi | 98.34 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.33 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.33 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.32 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.29 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.29 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.26 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.24 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.23 | |
| 1jk9_B | 249 | CCS, copper chaperone for superoxide dismutase; pr | 98.23 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.18 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.16 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.15 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.14 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.13 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.13 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.11 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.11 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.11 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.1 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.09 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.09 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.07 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.04 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.04 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.03 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.02 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.01 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.0 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.99 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.98 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.97 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.96 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.94 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.92 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.92 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.9 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.9 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.85 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.84 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.8 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.78 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 97.77 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.74 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.7 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.69 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.69 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.69 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.65 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.63 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.62 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.61 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.61 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.6 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.6 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.58 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.56 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.52 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.48 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.44 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.44 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.4 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.29 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.27 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.26 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.23 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.22 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.17 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.16 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.15 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.1 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.1 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.06 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.01 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.99 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.94 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.85 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.83 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 96.71 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.66 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.56 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.54 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 96.42 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.4 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.35 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.31 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.3 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.24 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.16 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.01 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.0 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 95.73 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.3 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 95.15 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.02 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.02 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.01 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.62 | |
| 2pk2_A | 358 | Cyclin-T1, protein TAT; TAR, twinning, transcripti | 94.35 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 94.25 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 94.18 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 93.91 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 93.79 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 92.91 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 91.11 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 90.96 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 90.88 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 90.36 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 89.96 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 88.45 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 88.42 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 85.12 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 85.05 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 84.25 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 83.76 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 83.43 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 82.83 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 81.93 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 81.53 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 80.19 |
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-123 Score=1138.91 Aligned_cols=712 Identities=34% Similarity=0.505 Sum_probs=638.4
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccCCC
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGT 206 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 206 (937)
++++.|+||+|++|+++||+.|++++||.+++||+.++++.|+||+...+. +++.++++++||++...+...
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~--------~~i~~ai~~~Gy~~~~~~~~~ 74 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDF--------ETIKRVIEDLGYGVVDEQAAV 74 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHCCEESSCCCCC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCH--------HHHHHHHHhcCCccccccccc
Confidence 478999999999999999999999999999999999999999999987776 889999999999986544321
Q ss_pred ccchhhhhHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhhhhhhhHHHhhhhhHHHHHHHHHHhhccHHHHHHHH
Q 002310 207 DNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGV 286 (937)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~ 286 (937)
... . ++.++..+++.++++++++.++..+ ++. .|. ..|+.+++++|+++|+|||||++||
T Consensus 75 ~~~--~---------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~-----~~~~~~~l~~~~~~~~g~~~~~~a~ 134 (723)
T 3j09_A 75 SAE--V---------EHLSRMKRKLYVAAFAGVLLLFLAH---FIS-LPY-----EDFVQLLIALPAIFYSGSSIFKAAF 134 (723)
T ss_dssp CCC--C---------CCCCCSCCCSSSTTTTHHHHHHHTT---SSC-SSS-----SCCSCCSTHHHHHHHHHHHHHHHTC
T ss_pred chh--h---------HHHHHHHHHHHHHHHHHHHHHHHHH---Hhc-cch-----HHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 110 0 1223345567777666654443221 111 111 2356678899999999999999999
Q ss_pred HHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEE
Q 002310 287 KSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKAR 366 (937)
Q Consensus 287 ~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~ 366 (937)
++|+++++|||+|++++++++|++|++.++....+...||++++++++++++|+++|.++++|+++.+++|.++.|.+++
T Consensus 135 ~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~ 214 (723)
T 3j09_A 135 SALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAV 214 (723)
T ss_dssp CTTTTCSTTSCSSCSCHHHHHHHHHHHHHHTTTTCCCCCCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEE
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeE
Confidence 99999999999999999999999999988754222234899999999999999999999999999999999999999999
Q ss_pred EEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCccccceeeecceEEEE
Q 002310 367 LLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVE 446 (937)
Q Consensus 367 v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~ 446 (937)
|+|+ |++++|+++||+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+|+.||+||++.+|.++++
T Consensus 215 v~r~----g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~ 290 (723)
T 3j09_A 215 VIRD----GKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIR 290 (723)
T ss_dssp EEET----TEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEE
T ss_pred EEEC----CEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCeEEecccccCCCcceeecCCCeeccceEEecCcEEEE
Confidence 9986 589999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHH
Q 002310 447 VRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCS 526 (937)
Q Consensus 447 V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~ 526 (937)
|+++|.+|.++||++++++++.+++|+|+.+|+++.+|++++++++++++++|++... .++..++.++++
T Consensus 291 v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~----------~~~~~~~~~~i~ 360 (723)
T 3j09_A 291 ATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH----------APLLFAFTTLIA 360 (723)
T ss_dssp EEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTT----------CTTCCSHHHHHH
T ss_pred EEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999888765432 234456778999
Q ss_pred HHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCC
Q 002310 527 VLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPN 606 (937)
Q Consensus 527 vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~ 606 (937)
++++ +|||+|+ +++|+++..++.+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..
T Consensus 361 vlvi---a~P~aL~--la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~------- 428 (723)
T 3j09_A 361 VLVV---ACPCAFG--LATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL------- 428 (723)
T ss_dssp HHHH---HSCTTHH--HHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEES-------
T ss_pred HHHh---hhhHHHH--HHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeC-------
Confidence 9999 9999999 999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcCeEEEeccHHHHHhc
Q 002310 607 SKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSH 686 (937)
Q Consensus 607 ~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~~~~l~~~ 686 (937)
+.++++++.+++.+|.++.||+++|+++++++.+.... ...++...+++|+.+ +.+.+|+++++.+.
T Consensus 429 -------~~~~~~~l~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~--~~~~~~~~~g~g~~~----~~~~~g~~~~~~~~ 495 (723)
T 3j09_A 429 -------NGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELG--EPEKVEVIAGEGVVA----DGILVGNKRLMEDF 495 (723)
T ss_dssp -------SSCHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTCCCC--SCCCCEEETTTEEEE----TTEEEECHHHHHHT
T ss_pred -------CCCHHHHHHHHHHHhccCCCchhHHHHHHHHhcCCCcC--CccceEEecCCceEE----EEEEECCHHHHHhc
Confidence 23578899999999999999999999999998877643 336788899999887 67899999999988
Q ss_pred CCCCcc--hhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002310 687 GVDTST--FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 687 ~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~ 764 (937)
+..... .+..+..+.++.+.++++.|++++|+++++|++||+++++|+.|+++|++++|+|||+..+|.++|+++||+
T Consensus 496 ~~~~~~~~~~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~ 575 (723)
T 3j09_A 496 GVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD 575 (723)
T ss_dssp TCCCCHHHHHHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred CCCccHHHHHHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc
Confidence 765432 122344567789999999999999999999999999999999999999999999999999999999999998
Q ss_pred CceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHH
Q 002310 765 KDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSR 844 (937)
Q Consensus 765 ~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R 844 (937)
.++++++|+||.++|+.||++ +.|+|+|||.||+|||++||||||||+|+|+++++||+|++++++..+++++++||
T Consensus 576 --~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r 652 (723)
T 3j09_A 576 --LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSR 652 (723)
T ss_dssp --EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHH
T ss_pred --EEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHH
Confidence 899999999999999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhccccc
Q 002310 845 LTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFS 908 (937)
Q Consensus 845 ~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~ 908 (937)
+++++|+||+.|+++||++++|+|+++++|++|++++|++|+++|.+||++|++||+||+..++
T Consensus 653 ~~~~~i~~nl~~a~~~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~~~ 716 (723)
T 3j09_A 653 KTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNYVP 716 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHHHHHHHTTSCCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCHHHHHHHHhccHHHHHHHHHHhccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999975533
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-120 Score=1100.83 Aligned_cols=646 Identities=36% Similarity=0.554 Sum_probs=591.6
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHhhhhhhhHHHhhhhhHHHHHHHHHHhhccHHHHHHHHHHHHcCCCCchhHHHHH
Q 002310 224 LKESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLG 303 (937)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~Li~l~ 303 (937)
.+..++|+.++++++++.++..+.+++ .+.+.......|+.++|++|+++|+|||||++||++|+++.+|||+|+++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~l~ 155 (736)
T 3rfu_A 78 YLDMRRRFWIALMLTIPVVILEMGGHG--LKHFISGNGSSWIQLLLATPVVLWGGWPFFKRGWQSLKTGQLNMFTLIAMG 155 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCC--TTSSCSTTHHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhccccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCChHHHHHHH
Confidence 344556788888888877665442222 011111123458899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccc----------CcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCC
Q 002310 304 AVSSFTVSSLAALVPKL----------GWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDA 373 (937)
Q Consensus 304 ~~~a~~~s~~~~~~~~~----------~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~ 373 (937)
+.++|+||++.++.|.. ....||++++++++++++|+++|.++++|+++++++|.++.|+++++++++
T Consensus 156 ~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~d-- 233 (736)
T 3rfu_A 156 IGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKED-- 233 (736)
T ss_dssp HHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETT--
T ss_pred HHHHHHHHHHHHhcccccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC--
Confidence 99999999999986532 125799999999999999999999999999999999999999999998854
Q ss_pred CCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCccccceeeecceEEEEEEecCCc
Q 002310 374 KDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGE 453 (937)
Q Consensus 374 ~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~V~~~G~~ 453 (937)
|++++|++++|+|||+|+|++||+|||||+|++|++.||||+|||||.|+.|.+|+.|++||+|.+|.++++|+++|.+
T Consensus 234 -g~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~ 312 (736)
T 3rfu_A 234 -GSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSD 312 (736)
T ss_dssp -EEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCEEEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTT
T ss_pred -CEEEEEEHhhCCCCCEEEECCCCcccccEEEEECceEeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechh
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhccc
Q 002310 454 TAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETS 533 (937)
Q Consensus 454 T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~ 533 (937)
|.++||++++++++.+++|+|+.+|+++.+|+++++++++++|++|++++.. ..+..++.+++++|++
T Consensus 313 T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~---------~~~~~~l~~ai~vlvi--- 380 (736)
T 3rfu_A 313 TMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQ---------PALSYGLIAAVSVLII--- 380 (736)
T ss_dssp SHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS---------SSTTHHHHHHHHHHHH---
T ss_pred hHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---------chHHHHHHHHHHhHHH---
Confidence 9999999999999999999999999999999999999999999999876531 1256788999999999
Q ss_pred ccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCC
Q 002310 534 ICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIH 613 (937)
Q Consensus 534 ~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~ 613 (937)
+|||+|+ +++|+++.+++.+++++|+++|+++++|+++++|+||||||||||+|+|+|.+++. .
T Consensus 381 acPcaL~--la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~--------------~ 444 (736)
T 3rfu_A 381 ACPCALG--LATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVT--------------D 444 (736)
T ss_dssp HCCSTHH--HHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEE--------------S
T ss_pred hhhhHHH--HHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEe--------------c
Confidence 9999999 99999999999999999999999999999999999999999999999999999983 3
Q ss_pred CCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcCeEEEeccHHHHHhcCCCCcch
Q 002310 614 PLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTF 693 (937)
Q Consensus 614 ~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~~~~l~~~~~~~~~~ 693 (937)
+.++++++.+++++|.+++||+++||++++++.+.... ...+|...+|+|+.+.++++.+.+|+++++.+.+.+....
T Consensus 445 ~~~~~~~l~~aa~le~~s~hPla~Aiv~~a~~~~~~~~--~~~~f~~~~g~gv~~~~~g~~~~~G~~~~~~~~~~~~~~~ 522 (736)
T 3rfu_A 445 DFVEDNALALAAALEHQSEHPLANAIVHAAKEKGLSLG--SVEAFEAPTGKGVVGQVDGHHVAIGNARLMQEHGGDNAPL 522 (736)
T ss_dssp SSCHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTCCCCC--CCSCCCCCTTTEEEECSSSSCEEEESHHHHHHHCCCCHHH
T ss_pred CCCHHHHHHHHHHHhhcCCChHHHHHHHHHHhcCCCcc--CcccccccCCceEEEEECCEEEEEcCHHHHHHcCCChhHH
Confidence 45678999999999999999999999999998877643 3367888999999999999999999999999887765432
Q ss_pred -hhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEecc
Q 002310 694 -QEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV 772 (937)
Q Consensus 694 -~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~ 772 (937)
+..++...+|.++++++.|++++|+++++|++|++++++|++||++|++++|+|||+..+|.++|+++||+ .+++++
T Consensus 523 ~~~~~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~--~v~a~~ 600 (736)
T 3rfu_A 523 FEKADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK--KVVAEI 600 (736)
T ss_dssp HHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC--CEECSC
T ss_pred HHHHHHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC--EEEEec
Confidence 23445667899999999999999999999999999999999999999999999999999999999999998 899999
Q ss_pred ChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHH
Q 002310 773 KPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQ 852 (937)
Q Consensus 773 ~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ 852 (937)
+|+||.++|+.||++|+.|+|+|||+||+|||++||||||||+|+|+++++||+|++++++..|++++++||+++++|||
T Consensus 601 ~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~q 680 (736)
T 3rfu_A 601 MPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQ 680 (736)
T ss_dssp CHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhccc
Q 002310 853 NLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLK 906 (937)
Q Consensus 853 nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~ 906 (937)
|++|+++||+++||+|+|+++|++|+.++|++|+++|.+||++|++||+||+..
T Consensus 681 nl~~a~~yN~~~iplAag~l~p~~G~~l~P~~aa~~m~~Ssv~Vv~nslrl~~~ 734 (736)
T 3rfu_A 681 NLFFAFIYNVLGVPLAAGVLYPLTGLLLSPMIAAAAMALSSVSVIINALRLKRV 734 (736)
T ss_dssp HHHHHHHHHHHHHHHHHTSSTTTSSCCCCHHHHHHHHHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHhhHHHHHHHHHHhccc
Confidence 999999999999999999999999988999999999999999999999999653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-112 Score=1022.11 Aligned_cols=632 Identities=35% Similarity=0.528 Sum_probs=573.5
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHhhhhhhhHHHhhhhhHHHHHHHHHHhhccHHHHHHHHHHHHcCCCCchhHHHHHHH
Q 002310 226 ESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAV 305 (937)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~Li~l~~~ 305 (937)
+..++++++++++++.++..+ ++. .|+ ..|+.+++++|+++|+|||||++||++++++.+|||+|++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~---~~~-~~~-----~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~L~~l~~~ 75 (645)
T 3j08_A 5 RMKRKLYVAAFAGVLLLFLAH---FIS-LPY-----EDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVG 75 (645)
T ss_dssp SSSSSSSSSSCSHHHHHHHTT---TCC-SCC-----CSSSCCCTHHHHHHHHHHHHHHHTCCTTTTCSGGGCCCCSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---Hhh-cch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 345677778777776655322 221 111 23667888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCc
Q 002310 306 SSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSL 385 (937)
Q Consensus 306 ~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L 385 (937)
++|++|++.++....+...||++++++++++++|+++|.++++|+++.+++|.++.|++++|+|+ |++++|+++||
T Consensus 76 ~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~----g~~~~i~~~~l 151 (645)
T 3j08_A 76 AAFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRD----GKEIAVPVEEV 151 (645)
T ss_dssp HHHHHHHHHHHHHCCSCSSCCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEET----TEEEEEEGGGC
T ss_pred HHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC----CEEEEEEHHHC
Confidence 99999999887542222348999999999999999999999999999999999999999999986 58999999999
Q ss_pred cCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCccccceeeecceEEEEEEecCCccHHHHHHHHHHH
Q 002310 386 HVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEE 465 (937)
Q Consensus 386 ~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~ 465 (937)
+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+|+.||+||++.+|.++++|+++|.+|.++||.+++++
T Consensus 152 ~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~ 231 (645)
T 3j08_A 152 AVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVED 231 (645)
T ss_dssp CTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSC
T ss_pred CCCCEEEECCCCEEeeEEEEEECcEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHH
Q 002310 466 AQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLS 545 (937)
Q Consensus 466 a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~ 545 (937)
++.+++|+|+.+|+++.+|++++++++++++++|++... .++..++.++++++++ +|||+|+ +++
T Consensus 232 a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~----------~~~~~~~~~~i~vlvi---a~P~aL~--la~ 296 (645)
T 3j08_A 232 AMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH----------APLLFAFTTLIAVLVV---ACPCAFG--LAT 296 (645)
T ss_dssp CCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCS----------CSCCCTTTTTHHHHHH---HSCTTHH--HHH
T ss_pred hhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcHHHHHHHHHHHHHH---HhhhHHH--HHH
Confidence 999999999999999999999999999999888765432 1233456678899999 9999999 999
Q ss_pred HHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHH
Q 002310 546 HAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAA 625 (937)
Q Consensus 546 p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa 625 (937)
|+++..++.+++++|+++|+++++|++|++|++|||||||||+|+|+|.+++.. +.++++++.+++
T Consensus 297 p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~--------------~~~~~~~l~~aa 362 (645)
T 3j08_A 297 PTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL--------------NGDERELLRLAA 362 (645)
T ss_dssp HHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEES--------------SSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeC--------------CCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999875 235788999999
Q ss_pred hcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcCeEEEeccHHHHHhcCCCCcc--hhhHHHHHhCC
Q 002310 626 GVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTST--FQEVEMEDLMN 703 (937)
Q Consensus 626 ~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~~~~l~~~~~~~~~--~~~~~~~~~~~ 703 (937)
.+|.++.||+++|+++++++.+.... ...++...+|+|+.+ +.+.+|+++++.+.+..... .+..++.+.++
T Consensus 363 ~~e~~s~hPla~Aiv~~a~~~g~~~~--~~~~~~~~~g~g~~~----~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 436 (645)
T 3j08_A 363 IAERRSEHPIAEAIVKKALEHGIELG--EPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEVELALEKLEREA 436 (645)
T ss_dssp HHHTTCCSHHHHHHHHHHHHTTCCCC--SCCCCEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred HHhhcCCChhHHHHHHHHHhcCCCcC--CccceEEecCCceEE----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhcC
Confidence 99999999999999999998877643 336788899999887 67899999999887765432 12233456678
Q ss_pred CeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHH
Q 002310 704 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINE 783 (937)
Q Consensus 704 ~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~ 783 (937)
.+.++++.|++++|+++++|++||+++++|++|+++|++++|+|||+..+|+++|+++||+ .++++++|+||.++|+.
T Consensus 437 ~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--~~~~~~~P~~K~~~v~~ 514 (645)
T 3j08_A 437 KTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVLPHQKSEEVKK 514 (645)
T ss_dssp CCCEEEEETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCTTCHHHHHHH
T ss_pred CeEEEEEECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC--EEEEeCCHHhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998 89999999999999999
Q ss_pred HhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 784 LQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIV 863 (937)
Q Consensus 784 Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii 863 (937)
+|++ +.|+|+|||.||+|||++||||||||+|++.++++||++++++++..+++++++||+++++|+||+.|+++||++
T Consensus 515 l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~ 593 (645)
T 3j08_A 515 LQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVI 593 (645)
T ss_dssp HTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhccccc
Q 002310 864 GIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFS 908 (937)
Q Consensus 864 ~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~ 908 (937)
++|+|+++++|++|++++|++|+++|.+||++|++||+||+..++
T Consensus 594 ~i~la~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~~~ 638 (645)
T 3j08_A 594 LIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNYVP 638 (645)
T ss_dssp HHHHHTTTTTTTCCCSCCHHHHHHHHHTHHHHHHHHTTSCCCCSC
T ss_pred HHHHHHHhHhhhcccccCHHHHHHHHhcchHHHHHhhHHhccCCC
Confidence 999999999999999999999999999999999999999975543
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-88 Score=834.82 Aligned_cols=503 Identities=22% Similarity=0.247 Sum_probs=433.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeec
Q 002310 329 PIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAG 408 (937)
Q Consensus 329 ~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G 408 (937)
+++++++++++..++.++++|+++++++|.++.|.+++|+|+ |++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 144 ~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~Rd----G~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g 219 (920)
T 1mhs_A 144 FGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRD----GTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTD 219 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECS----SSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEEC----CEEEEEEHHHcCCCCEEEeCCCCccccceEEEec
Confidence 456667778888999999999999999999999999999986 5899999999999999999999999999999999
Q ss_pred ce--eeeeccccCCCcccccCCCCccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHH
Q 002310 409 RS--TVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTY 486 (937)
Q Consensus 409 ~~--~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~ 486 (937)
++ .||||+|||||.|+.|.+|+.+|+||++.+|.++++|++||.+|.+|+|.+++++++.+++|+|+.+++++.++++
T Consensus 220 ~~~l~VDES~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~ 299 (920)
T 1mhs_A 220 DAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLI 299 (920)
T ss_dssp SSCCEEBCTTTSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHH
T ss_pred CceeeeeccccCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHH
Confidence 74 9999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCc
Q 002310 487 GVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGG 566 (937)
Q Consensus 487 ~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~ 566 (937)
+++++++++|+.|++ .+.++..++.++++++++ +|||+|+ +++|++++.+..+++++|+++|++
T Consensus 300 ~~~~~~~i~~~~~~~-----------~~~~~~~~l~~av~llV~---aiP~aLp--~~vti~la~g~~~mak~~ilvk~~ 363 (920)
T 1mhs_A 300 LVIFTLLIVWVSSFY-----------RSNPIVQILEFTLAITII---GVPVGLP--AVVTTTMAVGAAYLAKKKAIVQKL 363 (920)
T ss_dssp HHHHHHHHHHHTTTT-----------TTCCHHHHHHHHHHHHHH---HSCCCHH--HHHHHHHHHHHHHHHHTTCCCCCT
T ss_pred HHHHHHHHHHHHHHh-----------cCCcHHHHHHHHHHHHHH---hCchhHH--HHHHHHHHHHHHHHHhCCeEEecC
Confidence 777766655543321 234577888999999999 9999999 999999999999999999999999
Q ss_pred hHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHH-HhcccCCC--CChHHHHHHHH
Q 002310 567 NILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFA-AGVESNTV--HPIGKAIVEAA 643 (937)
Q Consensus 567 ~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~a-a~~e~~s~--hP~~~Ai~~~a 643 (937)
+++|+||++|+||||||||||+|+|+|.+++..+ +.++++++..+ .+.+..+. ||++.|+++++
T Consensus 364 ~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~-------------g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~ 430 (920)
T 1mhs_A 364 SAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVA-------------GVDPEDLMLTACLAASRKKKGIDAIDKAFLKSL 430 (920)
T ss_dssp TTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCS-------------CCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHH
T ss_pred chhhhhccCcEEEECCCCCccccceeEEEEeecC-------------CCCHHHHHHHHHHhcCCcccCCChHHHHHHHHH
Confidence 9999999999999999999999999999887541 12223344333 23344455 99999999988
Q ss_pred HhcCCccccccC-CceE----EecCCeeEEEEc---Ce--EEEeccHHHHHhcCCCCcch---------hhHHHHHhCCC
Q 002310 644 EFSNCQNVKVAD-GTFI----EEPGSGTVAIIE---DR--KVSVGTIDWLRSHGVDTSTF---------QEVEMEDLMNQ 704 (937)
Q Consensus 644 ~~~~~~~~~~~~-~~~~----~~~g~g~~~~i~---~~--~~~~G~~~~l~~~~~~~~~~---------~~~~~~~~~~~ 704 (937)
+..+........ .... ...++++.+.++ ++ .+.||+++++.+.|....+. +..++.+.+|.
T Consensus 431 ~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~ 510 (920)
T 1mhs_A 431 KYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGF 510 (920)
T ss_dssp HHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSC
T ss_pred HhcccchhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCC
Confidence 765432111111 1111 124778888774 33 36799999999887542111 12234567788
Q ss_pred eEEEEEEC-----CEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------
Q 002310 705 SLVYVGVD-----NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------- 766 (937)
Q Consensus 705 ~~~~v~~~-----~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------- 766 (937)
++++++++ .+|+|+++++||+|||++++|++||++||+|+|+|||++.||.+||+++||...
T Consensus 511 RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~ 590 (920)
T 1mhs_A 511 RSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGG 590 (920)
T ss_dssp CCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCC
T ss_pred EEEEEEEeccccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcc
Confidence 99999864 389999999999999999999999999999999999999999999999999631
Q ss_pred --------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCC
Q 002310 767 --------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR 832 (937)
Q Consensus 767 --------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~ 832 (937)
.+|+|++|+||.++|+.||++|+.|+|+|||+||+|||++||||||||+|+|+|+++||+|+++|+
T Consensus 591 ~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~ 670 (920)
T 1mhs_A 591 DMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPG 670 (920)
T ss_dssp CGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCC
T ss_pred cCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCC
Confidence 489999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 833 LSQLLVALELSRLTMKTVKQNLWWAFGYNIVG 864 (937)
Q Consensus 833 l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~ 864 (937)
|+.|++++++||++|+||+|++.|.++.|+..
T Consensus 671 ~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~ 702 (920)
T 1mhs_A 671 LGAIIDALKTSRQIFHRMYAYVVYRIALSIHL 702 (920)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999864
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-84 Score=819.30 Aligned_cols=581 Identities=20% Similarity=0.248 Sum_probs=458.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEE
Q 002310 325 FFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGV 404 (937)
Q Consensus 325 ~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgv 404 (937)
++..++++++++++...++.++++|+++.+++|.++.|.+++|+|+ |++++|+++||+|||+|.|++||+|||||+
T Consensus 134 ~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rd----g~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ 209 (1028)
T 2zxe_A 134 NLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRD----GEKSTINAEFVVAGDLVEVKGGDRIPADLR 209 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEET----TEEEEEEGGGCCTTCEEEEETTCBCCSEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEEC----CEEEEEEHHHCCcCCEEEECCCCEeeceEE
Confidence 3445667777788888899999999999999999999999999987 589999999999999999999999999999
Q ss_pred Eeecc-eeeeeccccCCCcccccCCCCc----------cccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChH
Q 002310 405 VRAGR-STVDESSFTGEPLPVTKIPESE----------VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPV 473 (937)
Q Consensus 405 ll~G~-~~VDeS~LTGEs~pv~K~~g~~----------v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l 473 (937)
|++|+ +.||||+|||||.|+.|.+++. +|+||.+.+|.++++|++||.+|.+|+|++++++++.+++|+
T Consensus 210 ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~l 289 (1028)
T 2zxe_A 210 IISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPI 289 (1028)
T ss_dssp EEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCCCHH
T ss_pred EEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCCCcH
Confidence 99996 7999999999999999999864 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHH
Q 002310 474 QRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGT 553 (937)
Q Consensus 474 ~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~ 553 (937)
|+.+++++.+++++++++++++++++++.+ .+|..++.++++++++ +|||+|+ +++|+++..+.
T Consensus 290 q~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-----------~~~~~~~~~~i~llv~---~iP~~Lp--~~vti~l~~~~ 353 (1028)
T 2zxe_A 290 AIEIEHFIHIITGVAVFLGVSFFILSLILG-----------YSWLEAVIFLIGIIVA---NVPEGLL--ATVTVCLTLTA 353 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----------CCHHHHHHHHHHHHHH---HSCTTHH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----------CcHHHHHHHHHHHHHH---HcCchHH--HHHHHHHHHHH
Confidence 999999999999999988888887765432 2456788889999999 9999999 99999999999
Q ss_pred HhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCC----CCCCCH--HHHHHHHHhc
Q 002310 554 SLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNP----IHPLSE--TEILKFAAGV 627 (937)
Q Consensus 554 ~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~----~~~~~~--~~ll~~aa~~ 627 (937)
.+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..++....... .+..++ .+++..++.+
T Consensus 354 ~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc 433 (1028)
T 2zxe_A 354 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALC 433 (1028)
T ss_dssp HHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHS
T ss_pred HHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999876543322111100 011122 2444444332
Q ss_pred -----c-cCCCCC----------hHHHHHHHHHhcCCccc--cccCCceEEec-----CCeeEEEE-----cC--eEEEe
Q 002310 628 -----E-SNTVHP----------IGKAIVEAAEFSNCQNV--KVADGTFIEEP-----GSGTVAII-----ED--RKVSV 677 (937)
Q Consensus 628 -----e-~~s~hP----------~~~Ai~~~a~~~~~~~~--~~~~~~~~~~~-----g~g~~~~i-----~~--~~~~~ 677 (937)
+ ..+.|| .+.|++++++..+.... ........+.| ++.....- ++ ..++|
T Consensus 434 ~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~K 513 (1028)
T 2zxe_A 434 NRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMK 513 (1028)
T ss_dssp CCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEE
T ss_pred CCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEe
Confidence 1 133454 55699999876532110 00011122222 22222111 12 24789
Q ss_pred ccHHHHHhcCCCCc------ch---------hhHHHHHhCCCeEEEEEE------------------------CCEEEEE
Q 002310 678 GTIDWLRSHGVDTS------TF---------QEVEMEDLMNQSLVYVGV------------------------DNMLAGL 718 (937)
Q Consensus 678 G~~~~l~~~~~~~~------~~---------~~~~~~~~~~~~~~~v~~------------------------~~~~lG~ 718 (937)
|+++.+.+.|.... +. +..++...+|.+++.++. |++|+|+
T Consensus 514 GA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~ 593 (1028)
T 2zxe_A 514 GAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGL 593 (1028)
T ss_dssp ECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEE
T ss_pred CCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEee
Confidence 99999988774210 10 112345678888888763 4589999
Q ss_pred EEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--------------------------------
Q 002310 719 IYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------------------------- 766 (937)
Q Consensus 719 i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~-------------------------------- 766 (937)
++++||+||+++++|++|+++||+|+|+|||++.||.++|+++||...
T Consensus 594 i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~ 673 (1028)
T 2zxe_A 594 MAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGS 673 (1028)
T ss_dssp EEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHH
T ss_pred eccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcH
Confidence 999999999999999999999999999999999999999999999631
Q ss_pred -------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeC-CChHHHHhhcCE
Q 002310 767 -------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASV 826 (937)
Q Consensus 767 -------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg-~gt~~a~~aADi 826 (937)
.+|||++|+||.++|+.+|+.|+.|+|+|||+||+|||++|||||||| +|+++|+++||+
T Consensus 674 ~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~ 753 (1028)
T 2zxe_A 674 DLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADM 753 (1028)
T ss_dssp HHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSE
T ss_pred HhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCE
Confidence 389999999999999999999999999999999999999999999999 799999999999
Q ss_pred EEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhccc
Q 002310 827 VLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLK 906 (937)
Q Consensus 827 vL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~ 906 (937)
|+++++|+.|++++++||++++||++|+.|.+++|+..+...+...+......++|+. +....-+..++.++.|.+.
T Consensus 754 Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~q---il~inl~~d~~pa~al~~e 830 (1028)
T 2zxe_A 754 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVT---ILCIDLGTDMVPAISLAYE 830 (1028)
T ss_dssp EETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHH---HHHHHTTTTHHHHHHGGGC
T ss_pred EecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHH---HHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999987654332111111112234432 2222223333445555433
Q ss_pred cccccccccCCCCCCccc-cccccc
Q 002310 907 FSSKQKASFQAPSSRVNS-NVDSHQ 930 (937)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~-~~~~~~ 930 (937)
+..++.+++||++.+. .+++..
T Consensus 831 --~~~~~~m~~~Pr~~~~~~l~~~~ 853 (1028)
T 2zxe_A 831 --QAESDIMKRQPRNPKTDKLVNER 853 (1028)
T ss_dssp --CCSSCGGGSCCCCTTTCCSSCHH
T ss_pred --ccchhhhccCCCCcccccccCHH
Confidence 4456678888876544 555544
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-82 Score=798.58 Aligned_cols=582 Identities=20% Similarity=0.243 Sum_probs=469.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEE
Q 002310 325 FFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGV 404 (937)
Q Consensus 325 ~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgv 404 (937)
++..++++++++++...+..++++|+++++++|.++.|.+++|+|+ |++++|+++||+|||+|.|++||+|||||+
T Consensus 139 ~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRd----G~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ 214 (1034)
T 3ixz_A 139 NLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRD----GDKFQINADQLVVGDLVEMKGGDRVPADIR 214 (1034)
T ss_pred chhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC----CEEEEEEHHHCCCCcEEEEcCCceecCCeE
Confidence 3445677777788888899999999999999999999999999987 689999999999999999999999999999
Q ss_pred Eeecc-eeeeeccccCCCcccccCCC----------CccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChH
Q 002310 405 VRAGR-STVDESSFTGEPLPVTKIPE----------SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPV 473 (937)
Q Consensus 405 ll~G~-~~VDeS~LTGEs~pv~K~~g----------~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l 473 (937)
|++|. +.||||+|||||.|+.|.++ +.+|+||.+.+|+++++|++||.+|.+|+|.+++.+++.+++|+
T Consensus 215 ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl 294 (1034)
T 3ixz_A 215 ILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPI 294 (1034)
T ss_pred EEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCCCcH
Confidence 99986 69999999999999999875 34899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHH
Q 002310 474 QRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGT 553 (937)
Q Consensus 474 ~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~ 553 (937)
|+.++++..++..++++++++.|++|++.+ .++..++.++++++++ +|||+|+ ++++++++.+.
T Consensus 295 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~i~l~v~---~iPe~Lp--~~vti~la~~~ 358 (1034)
T 3ixz_A 295 AIEIEHFVDIIAGLAILFGATFFIVAMCIG-----------YTFLRAMVFFMAIVVA---YVPEGLL--ATVTVCLSLTA 358 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------chHHHHHHHHHHHHHh---eeccccH--HHHHHHHHHHH
Confidence 999999999999888888888777765543 3567788899999999 9999998 99999999999
Q ss_pred HhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCC----CCCCC--HHHHHHHHHhc
Q 002310 554 SLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNP----IHPLS--ETEILKFAAGV 627 (937)
Q Consensus 554 ~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~----~~~~~--~~~ll~~aa~~ 627 (937)
.+++++|+++|+++++|+||++++||||||||||+|+|+|.+++..+..+........ ....+ ...++..++.+
T Consensus 359 ~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc 438 (1034)
T 3ixz_A 359 KRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLC 438 (1034)
T ss_pred HHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999987655443221111 01111 12333333322
Q ss_pred cc----------------CCCCChHHHHHHHHHhcCCcccc-------ccCCceEEecCCeeEEE-Ec----C--eEEEe
Q 002310 628 ES----------------NTVHPIGKAIVEAAEFSNCQNVK-------VADGTFIEEPGSGTVAI-IE----D--RKVSV 677 (937)
Q Consensus 628 e~----------------~s~hP~~~Ai~~~a~~~~~~~~~-------~~~~~~~~~~g~g~~~~-i~----~--~~~~~ 677 (937)
.. ...+|.+.|++++++..+..... ...-.|.....+..... .+ + ..++|
T Consensus 439 ~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~K 518 (1034)
T 3ixz_A 439 NRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMK 518 (1034)
T ss_pred ccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEe
Confidence 10 12478899999988765432111 00111222222222221 11 2 24789
Q ss_pred ccHHHHHhcCCCCc------chh---------hHHHHHhCCCeEEEE------------------------EECCEEEEE
Q 002310 678 GTIDWLRSHGVDTS------TFQ---------EVEMEDLMNQSLVYV------------------------GVDNMLAGL 718 (937)
Q Consensus 678 G~~~~l~~~~~~~~------~~~---------~~~~~~~~~~~~~~v------------------------~~~~~~lG~ 718 (937)
|+++.+.+.|.... +.. ..+....+|.+++.+ +.|++|+|+
T Consensus 519 GApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGl 598 (1034)
T 3ixz_A 519 GAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGL 598 (1034)
T ss_pred CChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEE
Confidence 99999998875311 111 112233445555443 346789999
Q ss_pred EEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---------------------------------
Q 002310 719 IYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--------------------------------- 765 (937)
Q Consensus 719 i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--------------------------------- 765 (937)
++++||+|++++++|++|+++||+|+|+|||+..||.++|+++||..
T Consensus 599 v~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~ 678 (1034)
T 3ixz_A 599 VSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGM 678 (1034)
T ss_pred EeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecH
Confidence 99999999999999999999999999999999999999999999942
Q ss_pred ------------------ceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeC-CChHHHHhhcCE
Q 002310 766 ------------------DKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASV 826 (937)
Q Consensus 766 ------------------~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg-~gt~~a~~aADi 826 (937)
..+|+|++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||| +|++.++++||+
T Consensus 679 ~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~ 758 (1034)
T 3ixz_A 679 QLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADM 758 (1034)
T ss_pred hhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCE
Confidence 1389999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhccc
Q 002310 827 VLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLK 906 (937)
Q Consensus 827 vL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~ 906 (937)
|+.++++..+..++++||++|+||++++.|.+++|+..+...+.. .++| ...|+.+..++..+.+...+-++.|.+.
T Consensus 759 Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~--~~~~-~~~pl~~~qiL~inl~~d~~palal~~e 835 (1034)
T 3ixz_A 759 ILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIY--ITVS-VPLPLGCITILFIELCTDIFPSVSLAYE 835 (1034)
T ss_pred EeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHh-hhhhHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999766443321 1233 2346777777778878888888777654
Q ss_pred cccccccccCCCCCCc-ccccccccc
Q 002310 907 FSSKQKASFQAPSSRV-NSNVDSHQL 931 (937)
Q Consensus 907 ~~~~~~~~~~~~~~~~-~~~~~~~~~ 931 (937)
+..++.+++||++. +..+.++.|
T Consensus 836 --~~~~~~m~~~Pr~~~~~~l~~~~~ 859 (1034)
T 3ixz_A 836 --KAESDIMHLRPRNPKRDRLVNEPL 859 (1034)
T ss_pred --CCChhhhhCCCCCCccccccCHHH
Confidence 44566788888875 576776654
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-88 Score=833.96 Aligned_cols=506 Identities=23% Similarity=0.291 Sum_probs=423.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeE
Q 002310 324 AFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADG 403 (937)
Q Consensus 324 ~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDg 403 (937)
.|++ +++++++++++.+++.++++|+++++++|+++.|.+++|+|+ |++++|+++||+|||+|.|++||+|||||
T Consensus 92 ~~~~-~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~Rd----G~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg 166 (885)
T 3b8c_A 92 DWQD-FVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRD----GKWSEQEAAILVPGDIVSIKLGDIIPADA 166 (885)
T ss_dssp CCTT-HHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCS----SCSCCCCTTTTCTTSBCCCCSSCCCSSCC
T ss_pred cHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEEC----CEEEEEEHHHCCCCCEEEECCCCEEeece
Confidence 3444 456777888899999999999999999999999999999876 57889999999999999999999999999
Q ss_pred EEeecce-eeeeccccCCCcccccCCCCccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHH
Q 002310 404 VVRAGRS-TVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSG 482 (937)
Q Consensus 404 vll~G~~-~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~ 482 (937)
+|++|++ .||||+|||||.|+.|.+|+.+|+||.+.+|.++++|++||.+|.+|||.+++++ +.+++|+|+.+++++.
T Consensus 167 ~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~ 245 (885)
T 3b8c_A 167 RLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGN 245 (885)
T ss_dssp CCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHH
T ss_pred EEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHH
Confidence 9999986 8999999999999999999999999999999999999999999999999998876 6789999999999988
Q ss_pred HHHHHH-HHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcE
Q 002310 483 HFTYGV-IALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGL 561 (937)
Q Consensus 483 ~~~~~v-l~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gi 561 (937)
++...+ +++++++++.|++. +.++..++.++++++++ +|||+|+ +++++++..+..+++++|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~v~llv~---aiP~aLp--~~vti~la~g~~r~ak~~i 309 (885)
T 3b8c_A 246 FCICSIAIGMVIEIIVMYPIQ-----------RRKYRDGIDNLLVLLIG---GIPIAMP--TVLSVTMAIGSHRLSQQGA 309 (885)
T ss_dssp HHHHHHHHHHHHHSTTTTTTT-----------CSCSTTHHHHHHHHTTT---TCCSSTT--THHHHTTTHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----------cCcHHHHHHHHHHHHHH---HhhhHHH--HHHHHHHHHHHHHHHhCCe
Confidence 754433 22333333333221 22345678889999999 9999999 9999999999999999999
Q ss_pred EEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccC-CCCChHHHHH
Q 002310 562 LLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESN-TVHPIGKAIV 640 (937)
Q Consensus 562 lvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~-s~hP~~~Ai~ 640 (937)
++|+++++|+||++|+||||||||||+|+|+|.+.... .+ ..+.++++++.+++.++.. +.||++.|++
T Consensus 310 lvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~--------~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~ 379 (885)
T 3b8c_A 310 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VF--------CKGVEKDQVLLFAAMASRVENQDAIDAAMV 379 (885)
T ss_dssp CCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SS--------CSSTTHHHHHHHHHHHCCSSSCCSHHHHHH
T ss_pred EeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--cc--------CCCCCHHHHHHHHHHHhCCCCCCchHHHHH
Confidence 99999999999999999999999999999999743211 00 0234567888888888764 8999999999
Q ss_pred HHHHhc-----CCccccccCCceEEecCCee-EEE-EcCe--EEEeccHHHHHhcCCCCcc-----hhhHHHHHhCCCeE
Q 002310 641 EAAEFS-----NCQNVKVADGTFIEEPGSGT-VAI-IEDR--KVSVGTIDWLRSHGVDTST-----FQEVEMEDLMNQSL 706 (937)
Q Consensus 641 ~~a~~~-----~~~~~~~~~~~~~~~~g~g~-~~~-i~~~--~~~~G~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~ 706 (937)
+++.+. ++. ....-.|.....+.. ... .+++ .+.||+++.+.+.|..... .+..++.+.+|.++
T Consensus 380 ~~~~~~~~~~~~~~--~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rv 457 (885)
T 3b8c_A 380 GMLADPKEARAGIR--EVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRS 457 (885)
T ss_dssp HTTCCTTCCCCSSC--CBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEE
T ss_pred HHhhchhhHhhcCc--eeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeE
Confidence 987531 111 111111111111111 110 1333 4779999999888753211 12234456678899
Q ss_pred EEEEEC-------------CEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------
Q 002310 707 VYVGVD-------------NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------- 766 (937)
Q Consensus 707 ~~v~~~-------------~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------- 766 (937)
++++++ ++|+|+++++||+|||++++|++||++||+|+|+|||++.||.++|+++||..+
T Consensus 458 l~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l 537 (885)
T 3b8c_A 458 LAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 537 (885)
T ss_dssp EEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSC
T ss_pred EEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCccee
Confidence 998864 589999999999999999999999999999999999999999999999999521
Q ss_pred ---------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcC
Q 002310 767 ---------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVAS 825 (937)
Q Consensus 767 ---------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aAD 825 (937)
.+|+|++|+||.++|+.||++|+.|+|+|||+||+|||++||||||||+|+|+|+++||
T Consensus 538 ~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aAD 617 (885)
T 3b8c_A 538 LGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASD 617 (885)
T ss_dssp CBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCS
T ss_pred eccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcc
Confidence 37999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 826 VVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIV 863 (937)
Q Consensus 826 ivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii 863 (937)
+|+++|+|+.|++++++||++|+|||||+.|++++|+.
T Consensus 618 ivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~ 655 (885)
T 3b8c_A 618 IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 655 (885)
T ss_dssp SCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTT
T ss_pred eeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999984
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-82 Score=801.13 Aligned_cols=586 Identities=19% Similarity=0.221 Sum_probs=453.3
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCe-EEEEeCCCccCCcEEEEcCCCEEee
Q 002310 323 KAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDS-IIEVPCNSLHVGDHIVVLPGDRIPA 401 (937)
Q Consensus 323 ~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~-~~~v~~~~L~~GDiV~v~~Ge~IPa 401 (937)
..|++. ++++++++++..++.++++|+++++++|+++.|.+++|+|++ ++ +++|+++||+|||+|.|++||+|||
T Consensus 87 ~~~~~~-~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g---~~~~~~I~~~~lv~GDiV~l~~Gd~IPa 162 (995)
T 3ar4_A 87 TAFVEP-FVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRAD---RKSVQRIKARDIVPGDIVEVAVGDKVPA 162 (995)
T ss_dssp SSSHHH-HHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTT---CSSCEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred hhHHHh-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCC---CceEEEEEHHHCCCCCEEEECCCCcccc
Confidence 356654 555666777888888888999999999999999999999863 23 5899999999999999999999999
Q ss_pred eEEEeec---ceeeeeccccCCCcccccCCC-------------CccccceeeecceEEEEEEecCCccHHHHHHHHHHH
Q 002310 402 DGVVRAG---RSTVDESSFTGEPLPVTKIPE-------------SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEE 465 (937)
Q Consensus 402 Dgvll~G---~~~VDeS~LTGEs~pv~K~~g-------------~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~ 465 (937)
||+|+++ .+.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|||.+++++
T Consensus 163 D~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 242 (995)
T 3ar4_A 163 DIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA 242 (995)
T ss_dssp EEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHT
T ss_pred cEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhc
Confidence 9999754 569999999999999999987 589999999999999999999999999999999999
Q ss_pred hhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcH----HHHHHHHHHHHhhcccccccccch
Q 002310 466 AQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPV----SLALQLSCSVLRKETSICCCLSMC 541 (937)
Q Consensus 466 a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~----~~~l~~ai~vlvv~~~~~Pcal~~ 541 (937)
++.+++|+|+.+|+++.++++++++++++++++|+...... ..+..| ...+..+++++++ +|||+|+
T Consensus 243 ~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ai~l~v~---aiP~~Lp- 313 (995)
T 3ar4_A 243 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDP-----VHGGSWIRGAIYYFKIAVALAVA---AIPEGLP- 313 (995)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSC-----SSSSCHHHHHHHHHHHHHHHHHH---HSCTTHH-
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----cccchHHHHHHHHHHHHHHHHHH---hcCcchH-
Confidence 99999999999999999999988888777766543211100 011112 3456678889999 9999999
Q ss_pred hhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCC---------C-CCCCC
Q 002310 542 PWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDP---------N-SKQNP 611 (937)
Q Consensus 542 pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~---------~-~~~~~ 611 (937)
+++|++++.+..+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..++. . ...++
T Consensus 314 -~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p 392 (995)
T 3ar4_A 314 -AVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAP 392 (995)
T ss_dssp -HHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSS
T ss_pred -HHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999865321110 0 00011
Q ss_pred CCC----------CCHHHHHHH--HHhccc--------------CCCCChHHHHHHHHHhcCC-ccc--c--cc------
Q 002310 612 IHP----------LSETEILKF--AAGVES--------------NTVHPIGKAIVEAAEFSNC-QNV--K--VA------ 654 (937)
Q Consensus 612 ~~~----------~~~~~ll~~--aa~~e~--------------~s~hP~~~Ai~~~a~~~~~-~~~--~--~~------ 654 (937)
... .....+..+ +.+++. ...+|.+.|++.++++.+. ... . ..
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~ 472 (995)
T 3ar4_A 393 EGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANAC 472 (995)
T ss_dssp CCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHH
T ss_pred ccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccc
Confidence 000 001112222 122211 1268999999999887665 100 0 00
Q ss_pred ----C------CceEEecC-CeeEEEE---cC-------eEEEeccHHHHHhcCCCCc------ch---------hhHHH
Q 002310 655 ----D------GTFIEEPG-SGTVAII---ED-------RKVSVGTIDWLRSHGVDTS------TF---------QEVEM 698 (937)
Q Consensus 655 ----~------~~~~~~~g-~g~~~~i---~~-------~~~~~G~~~~l~~~~~~~~------~~---------~~~~~ 698 (937)
. ..+..... +.+...+ ++ ..+.||+++.+.+.|.... +. +..++
T Consensus 473 ~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~ 552 (995)
T 3ar4_A 473 NSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKE 552 (995)
T ss_dssp HHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHH
T ss_pred hhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHH
Confidence 0 01111122 2222222 12 3579999999998874321 00 11223
Q ss_pred H--HhCCCeEEEEEE-----------------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHH
Q 002310 699 E--DLMNQSLVYVGV-----------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNS 753 (937)
Q Consensus 699 ~--~~~~~~~~~v~~-----------------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~t 753 (937)
. ..+|.+++.+++ |++|+|+++++|++||+++++|+.|+++||+++|+|||+..|
T Consensus 553 ~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~t 632 (995)
T 3ar4_A 553 WGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGT 632 (995)
T ss_dssp HHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHH
T ss_pred HHhhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHH
Confidence 3 557888887763 458999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCc-----------------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHH
Q 002310 754 AEYVASLVGIPKD-----------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAAL 804 (937)
Q Consensus 754 A~~iA~~~GI~~~-----------------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL 804 (937)
|.++|+++||... .+|||++|+||.++|+.||++|+.|+|+|||+||+|||
T Consensus 633 a~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~al 712 (995)
T 3ar4_A 633 AIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 712 (995)
T ss_dssp HHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHH
T ss_pred HHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHH
Confidence 9999999999632 49999999999999999999999999999999999999
Q ss_pred HhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhcccc--ccch
Q 002310 805 ASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAA-GVLLPVTG--TMLT 881 (937)
Q Consensus 805 ~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~-~~~~~~~g--~~l~ 881 (937)
++||||||||+|+++|+++||+++++++|..|++++++||++++||+||+.|++++|+..+...+ +.+ +| ..++
T Consensus 713 k~Advgiamg~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~---~g~~~pl~ 789 (995)
T 3ar4_A 713 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAA---LGLPEALI 789 (995)
T ss_dssp HHSTEEEEETTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCCCSSC
T ss_pred HHCCeEEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCcchHH
Confidence 99999999999999999999999999999999999999999999999999999999985432221 111 22 1245
Q ss_pred HHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCCccccccccc
Q 002310 882 PSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQ 930 (937)
Q Consensus 882 P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (937)
|+. +....-+...+.++.|.+. ++..+.+++||++.+..+++..
T Consensus 790 ~~q---il~~nl~~d~~p~l~l~~~--~~~~~~m~~~P~~~~~~l~~~~ 833 (995)
T 3ar4_A 790 PVQ---LLWVNLVTDGLPATALGFN--PPDLDIMDRPPRSPKEPLISGW 833 (995)
T ss_dssp HHH---HHHHHHTTTHHHHHHHTTC--CCCTTGGGSCCCCTTCCSSCHH
T ss_pred HHH---HHHHHHHHHHHHHHhhccC--CCChhHHhCCCCCCcccccCHH
Confidence 543 3334444455556666544 3345678888888777776654
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-41 Score=363.01 Aligned_cols=260 Identities=31% Similarity=0.498 Sum_probs=237.2
Q ss_pred HHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 002310 551 VGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESN 630 (937)
Q Consensus 551 ~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~ 630 (937)
.++.+++++||++|+++++|.++++++||||||||||+|+|.+.++. ++++++.+++++|..
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~------------------~~~~~l~~~~~~e~~ 65 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI------------------GDSLSLAYAASVEAL 65 (263)
Confidence 46788999999999999999999999999999999999999998874 135688999999999
Q ss_pred CCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcCeEEEeccHHHHHhcCCCCcchhhHHHHHhCCCeEEEEE
Q 002310 631 TVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVG 710 (937)
Q Consensus 631 s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~ 710 (937)
|.||+++|+.++++..+... .....+...+|.|+...+++..+.+|+++ .+.+ +++.
T Consensus 66 s~hp~a~ai~~~~~~~g~~~--~~~~~~~~~~G~g~~~~~~~~~~~~G~~~--------------------~~~~-~~~~ 122 (263)
T 2yj3_A 66 SSHPIAKAIVKYAKEQGVKI--LEVKDFKEISGIGVRGKISDKIIEVKKAE--------------------NNND-IAVY 122 (263)
Confidence 99999999999988776643 23456788899999999888877788754 1334 6778
Q ss_pred ECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCE
Q 002310 711 VDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENV 790 (937)
Q Consensus 711 ~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~ 790 (937)
.+..+.|.+.+.|+++|+++++++.|++.|++++|+|||+..++..+++++||. .+|+.+.|++|..+++.++..++.
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~--~~f~~~~p~~k~~~~~~l~~~~~~ 200 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ--EYYSNLSPEDKVRIIEKLKQNGNK 200 (263)
Confidence 889999999999999999999999999999999999999999999999999997 789999999999999999999999
Q ss_pred EEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHH
Q 002310 791 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQN 853 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~n 853 (937)
|+|||||.||++|+++|++||++|.+++.+.+.+|++++++++..++.+++++|+++++||||
T Consensus 201 ~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 201 VLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 999999999999999999999999889999999999999999999999999999999999998
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-32 Score=295.56 Aligned_cols=277 Identities=36% Similarity=0.524 Sum_probs=233.8
Q ss_pred HHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCC
Q 002310 552 GTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNT 631 (937)
Q Consensus 552 ~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s 631 (937)
+..+++++||++|+++++|+++++++||||||||||.+++.+.+++.. .+ ++++++.+++++|..+
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~-------------~~-~~~~~l~~~~~~e~~s 74 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL-------------NG-DERELLRLAAIAERRS 74 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEES-------------SS-CHHHHHHHHHHHTTTC
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeC-------------CC-CHHHHHHHHHHHhhcC
Confidence 567889999999999999999999999999999999999999999876 22 5788999999999999
Q ss_pred CCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcCeEEEeccHHHHHhcCCCCc-chh-hHHHHHhCCCeEEEE
Q 002310 632 VHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTS-TFQ-EVEMEDLMNQSLVYV 709 (937)
Q Consensus 632 ~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~~~~l~~~~~~~~-~~~-~~~~~~~~~~~~~~v 709 (937)
.||+++|+.++++..++.. .....+....|.|+.. ..+.+|+++++.+.+.... ..+ ........+.+++++
T Consensus 75 ~hp~~~a~~~~~~~~g~~~--~~~~~~~~~~G~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~ 148 (287)
T 3a1c_A 75 EHPIAEAIVKKALEHGIEL--GEPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIV 148 (287)
T ss_dssp CSHHHHHHHHHHHHTTCCC--CCCSCEEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHhcCCCc--cccccceeecCCCeEE----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhCCCeEEEE
Confidence 9999999999998887753 2335677788988876 4577788888776655431 111 223344568899999
Q ss_pred EECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCC
Q 002310 710 GVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDEN 789 (937)
Q Consensus 710 ~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~ 789 (937)
+.|+.+.+.+...++++|+++++++.|++.|+++.++||++...+..+.+.+|+. .+|..+.|+.|...++.++.. .
T Consensus 149 ~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~--~~f~~i~~~~K~~~~~~l~~~-~ 225 (287)
T 3a1c_A 149 ARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVLPHQKSEEVKKLQAK-E 225 (287)
T ss_dssp EETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCTTCHHHHHHHHTTT-C
T ss_pred EECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc--eeeeecChHHHHHHHHHHhcC-C
Confidence 9999999999999999999999999999999999999999999999999999997 789999999999999999888 8
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHH
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVK 851 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~ 851 (937)
.++||||+.||.+|++.|+++|+++.+.+..++.+|+++.++++..+..+++.+|+++++||
T Consensus 226 ~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 226 VVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp CEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred eEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999987766667789999998999999999999999999886
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-32 Score=292.70 Aligned_cols=276 Identities=35% Similarity=0.531 Sum_probs=237.0
Q ss_pred EcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHH
Q 002310 563 LRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEA 642 (937)
Q Consensus 563 vk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~ 642 (937)
+|+++++|++++++.|+||++||||.|+++|.++... .. ++.+++.++++++..+.||+..++.++
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~-------------~~-~~~~~~~~~~~~~~~s~~~~~~a~~~~ 66 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGF-------------NH-SEDELLQIAASLEARSEHPIAAAIVEE 66 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEES-------------SS-CHHHHHHHHHHHHTTCCSHHHHHHHHH
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEec-------------CC-CHHHHHHHHHHhhccCCCHHHHHHHHH
Confidence 5899999999999999999999999999999999876 33 678899999999999999999999999
Q ss_pred HHhcCCccccccCCceEEecCCeeEEEEcCeEEEeccHHHHHhcCCCCcchhhHHHHHhCCCeEEEEEECCEEEEEEEec
Q 002310 643 AEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVE 722 (937)
Q Consensus 643 a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~ 722 (937)
++..+... .....+....+.|....+++..+..|+.+++.+.+.... +........+....++..++.++|.+.+.
T Consensus 67 ~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (280)
T 3skx_A 67 AEKRGFGL--TEVEEFRAIPGKGVEGIVNGRRYMVVSPGYIRELGIKTD--ESVEKLKQQGKTVVFILKNGEVSGVIALA 142 (280)
T ss_dssp HHHTTCCC--CCCEEEEEETTTEEEEEETTEEEEEECHHHHHHTTCCCC--TTHHHHHTTTCEEEEEEETTEEEEEEEEE
T ss_pred HHhcCCCC--CCccceeecCCCEEEEEECCEEEEEecHHHHHHcCCCch--HHHHHHHhCCCeEEEEEECCEEEEEEEec
Confidence 99887653 233567788999999999999999999999988776543 22233445677889999999999999999
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHH
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAA 802 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~ 802 (937)
|+++|++.++++.|++.|+++.++||++...+..+.+++|+. .+|..+.|.+|...++.+.+.. .++|+||+.||.+
T Consensus 143 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~--~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~ 219 (280)
T 3skx_A 143 DRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD--DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAP 219 (280)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHH
T ss_pred CCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh--hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHH
Confidence 999999999999999999999999999999999999999997 8999999999999999998876 5699999999999
Q ss_pred HHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 803 ALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFG 859 (937)
Q Consensus 803 AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~ 859 (937)
|++.|++||+||++.+..++.||+++..+++..+..+++++|+++++++||+.|++.
T Consensus 220 ~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 220 ALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred HHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999989999999999999999999999999999999999999986
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-27 Score=218.27 Aligned_cols=111 Identities=43% Similarity=0.703 Sum_probs=106.2
Q ss_pred HHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCcc
Q 002310 353 DMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEV 432 (937)
Q Consensus 353 ~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v 432 (937)
++++|.++.|.+++|+|+ |++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+|+.+
T Consensus 2 al~~L~~l~p~~a~v~r~----g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~~vdeS~LTGEs~pv~k~~g~~v 77 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRD----GKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEV 77 (113)
T ss_dssp HHHHHHHHSCSEEEEEET----TEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEE
T ss_pred HHHHHhcCCCCEEEEEEC----CEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceEEEEccccCCCCccEEECCCCEE
Confidence 467788889999999986 5899999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeecceEEEEEEecCCccHHHHHHHHHHHhh
Q 002310 433 AAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQ 467 (937)
Q Consensus 433 ~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~ 467 (937)
|+||+|.+|.++++|+++|.+|.+++|++++++++
T Consensus 78 ~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a~ 112 (113)
T 2hc8_A 78 FGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM 112 (113)
T ss_dssp CTTCEECSSCEEEEEEECGGGSHHHHHHHHHHHHH
T ss_pred EeCCEEeeceEEEEEEEecCcCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999998875
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.6e-27 Score=219.66 Aligned_cols=120 Identities=39% Similarity=0.602 Sum_probs=108.2
Q ss_pred HHHhhHHHHHhhcCCCceEEEEecCCCCC---eEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcc
Q 002310 347 KIKATSDMTGLLGILPSKARLLVDNDAKD---SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLP 423 (937)
Q Consensus 347 ~~k~~~~l~~l~~~~p~~~~v~~~~~~~g---~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~p 423 (937)
++|+.+++++|.++.|.+++|+|++. ++ .+++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~-~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDS-DNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHSMVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSS-STTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCCEEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCC-CCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccEEEEeccccCCCcc
Confidence 46788999999999999999998632 12 268899999999999999999999999999999999999999999999
Q ss_pred cccCCCCccccceeeecceEEEEEEecCCccHHHHHHHHHHHhh
Q 002310 424 VTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQ 467 (937)
Q Consensus 424 v~K~~g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~ 467 (937)
+.|.+|+.||+||+|.+|.++++|+++|.+|.+++|++++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a~ 124 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEAQ 124 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTTC
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999987653
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.89 E-value=7.9e-25 Score=240.49 Aligned_cols=121 Identities=15% Similarity=0.187 Sum_probs=110.1
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------------eeEeccChhh
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------------------KVLSGVKPNE 776 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~-------------------------~v~ar~~Pe~ 776 (937)
.+++||+++++++.|+++|++++|+|||...+++++++++|+... .++++..|.+
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~ 218 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 218 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence 479999999999999999999999999999999999999998532 2356667889
Q ss_pred HHHHHHHHhcCCCEEEEEcCCcccHHHH---HhCCeeEEeC-------CChHHHHhhcCEEEeCCChhHHHHHHHH
Q 002310 777 KKRFINELQNDENVVAMVGDGINDAAAL---ASSHIGVAMG-------GGVGAASEVASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 777 K~~iV~~Lq~~G~~VamvGDG~NDa~AL---~~AdVGIamg-------~gt~~a~~aADivL~~~~l~~l~~~i~~ 842 (937)
|...+..+++.++.|+|+|||+||+||+ ++|||||+|| ++++.+++++||||++|++..++.+|..
T Consensus 219 k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il~ 294 (297)
T 4fe3_A 219 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSILQ 294 (297)
T ss_dssp TCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHHH
T ss_pred HHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHHH
Confidence 9999999999999999999999999995 5999999999 7999999999999999999999988753
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.62 E-value=4.9e-16 Score=158.62 Aligned_cols=141 Identities=16% Similarity=0.192 Sum_probs=117.9
Q ss_pred CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcC----
Q 002310 712 DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND---- 787 (937)
Q Consensus 712 ~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~---- 787 (937)
.++.++.+.+.|.+ +++.|+++|+++.++||++...+..+++++|+. .+|... .+|.+.++.+.++
T Consensus 40 ~~~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~--~~f~~~--~~K~~~~~~~~~~~g~~ 109 (189)
T 3mn1_A 40 DGSEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE--HLFQGR--EDKLVVLDKLLAELQLG 109 (189)
T ss_dssp TSCEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS--EEECSC--SCHHHHHHHHHHHHTCC
T ss_pred CCcEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH--HHhcCc--CChHHHHHHHHHHcCCC
Confidence 33444555544433 999999999999999999999999999999997 677665 6777777776554
Q ss_pred CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCC----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 788 ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR----LSQLLVALELSRLTMKTVKQNLWWAFGYNI 862 (937)
Q Consensus 788 G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~----l~~l~~~i~~~R~~~~~i~~nl~~a~~~Ni 862 (937)
...++||||+.||.+|++.|+++++++++.+..++.||+++.+++ +..+.+.+..+|+++++|+||+.|++.||-
T Consensus 110 ~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 188 (189)
T 3mn1_A 110 YEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLEGHHHHH 188 (189)
T ss_dssp GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTSTTC----
T ss_pred hhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhccccccC
Confidence 467999999999999999999999999999999999999998763 788999999999999999999999999983
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=5.9e-15 Score=144.41 Aligned_cols=131 Identities=18% Similarity=0.209 Sum_probs=100.4
Q ss_pred CCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhc-CCcccccc-----C
Q 002310 582 KTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFS-NCQNVKVA-----D 655 (937)
Q Consensus 582 KTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~-~~~~~~~~-----~ 655 (937)
..||+|.|+++++++.+. .++++++++++++++|..|+||+++||++++++. ++...... .
T Consensus 13 ~~~tit~gnr~vt~v~~~-------------~g~~e~elL~lAAs~E~~SeHPla~AIv~~A~~~~~l~~~~~~~~~~~~ 79 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPA-------------QGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATF 79 (156)
T ss_dssp --------CEEEEEEEEC-------------TTSCHHHHHHHHHHTTSSCCSHHHHHHHHHHHHHTTCCCCCHHHHTCEE
T ss_pred CCCceecCCCeEEEEEec-------------CCCCHHHHHHHHHHHhCcCCCHHHHHHHHHHHHhcCCCcccccccccce
Confidence 479999999999999875 4578899999999999999999999999999987 76532221 1
Q ss_pred CceEEecC-CeeEEEEcCeEEEecc----HHHHHhcCCCCc-ch-hhHHHHHhCCCeEEEEEECCEEEEEEEecCcCCh
Q 002310 656 GTFIEEPG-SGTVAIIEDRKVSVGT----IDWLRSHGVDTS-TF-QEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRD 727 (937)
Q Consensus 656 ~~~~~~~g-~g~~~~i~~~~~~~G~----~~~l~~~~~~~~-~~-~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~ 727 (937)
..|...+| +|+ .++++.+.+|+ .+|+.+.++... .. +..++.+.+|.+++|++.|++++|+|++.|++||
T Consensus 80 ~~F~a~~G~~Gv--~v~G~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 80 VPFTAQSRMSGI--NIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKG 156 (156)
T ss_dssp EEEETTTTEEEE--EETTEEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEEECCCC
T ss_pred eeccccCCCCeE--EECCEEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECCEEEEEEEEecCCCC
Confidence 45666788 898 56999999999 568887777654 22 2344566789999999999999999999999996
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=5.2e-14 Score=142.04 Aligned_cols=130 Identities=26% Similarity=0.386 Sum_probs=105.5
Q ss_pred CccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhc-CCccccccCCceEEec
Q 002310 584 GTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFS-NCQNVKVADGTFIEEP 662 (937)
Q Consensus 584 GTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~-~~~~~~~~~~~~~~~~ 662 (937)
||||+|+|+|.++..... ...+++++++.+++++|.+|+||+++||++++++. +... .....+|+..+
T Consensus 1 GTLT~G~p~V~~v~~~~~----------~~~~~~~~lL~laaa~E~~SeHPlA~AIv~~a~~~~~~~~-~~~~~~f~~i~ 69 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTE----------SNRISHHKILAIVGTAESNSEHPLGTAITKYCKQELDTET-LGTCIDFQVVP 69 (185)
T ss_dssp CCCCSCCCEEEEEEECSC----------TTTSCHHHHHHHHHHGGGSSSCHHHHHHHHHHHHHHTCSC-CCCCBCCEEET
T ss_pred CCCcCCcEEEEEEEecCC----------cCCCCHHHHHHHHHHHHccCCCHHHHHHHHHHHhhcCCCC-CCCccceEEec
Confidence 899999999999986521 02356789999999999999999999999999764 4321 12236899999
Q ss_pred CCeeEEEEcC----------------------------------------------------eEEEeccHHHHHhcCCCC
Q 002310 663 GSGTVAIIED----------------------------------------------------RKVSVGTIDWLRSHGVDT 690 (937)
Q Consensus 663 g~g~~~~i~~----------------------------------------------------~~~~~G~~~~l~~~~~~~ 690 (937)
|+|+.+.+++ +.+.+|+++||.++++..
T Consensus 70 G~Gv~~~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~i 149 (185)
T 2kmv_A 70 GCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLVI 149 (185)
T ss_dssp TTEEEEEECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTCCC
T ss_pred cceEEEEECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCCCC
Confidence 9999999988 589999999999988765
Q ss_pred cch--hhHHHHHhCCCeEEEEEECCEEEEEEEecCc
Q 002310 691 STF--QEVEMEDLMNQSLVYVGVDNMLAGLIYVEDR 724 (937)
Q Consensus 691 ~~~--~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~ 724 (937)
.+. ......+..+.+.++++.|++++|+|++.|+
T Consensus 150 ~~~~~~~~~~~~~~G~T~V~vaidg~l~g~iavaD~ 185 (185)
T 2kmv_A 150 NNDVNDFMTEHERKGRTAVLVAVDDELCGLIAIADT 185 (185)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEECC
T ss_pred CHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEEEcC
Confidence 432 2234455679999999999999999999995
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.2e-13 Score=154.05 Aligned_cols=135 Identities=16% Similarity=0.175 Sum_probs=110.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec---------------------cChhhHHHHHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG---------------------VKPNEKKRFIN 782 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar---------------------~~Pe~K~~iV~ 782 (937)
+++|++.+.++.|++.|+++.|+||+....+..+.+++|+. .++.. -.|+-...+.+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~--~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~ 255 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLD--YAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQ 255 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCC--eEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHH
Confidence 78999999999999999999999999999999999999996 34332 23333344444
Q ss_pred HHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 783 ELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYN 861 (937)
Q Consensus 783 ~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~N 861 (937)
.++-....+.|+||+.||.+|++.|++|++| ++.+..++.||.++..+++..+..+++......+++++|+.|++.||
T Consensus 256 ~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 256 QYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--------
T ss_pred HcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccccccccc
Confidence 5544456899999999999999999999999 88899999999999999999999999998888899999999999998
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-12 Score=129.72 Aligned_cols=127 Identities=23% Similarity=0.415 Sum_probs=100.6
Q ss_pred cCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhc-CCccccccCCceEEecCC
Q 002310 586 LTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFS-NCQNVKVADGTFIEEPGS 664 (937)
Q Consensus 586 LT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~-~~~~~~~~~~~~~~~~g~ 664 (937)
||+|+|+|+++..... ....+++++|++++++|.+|+||+++||++++++. +... .....+|+.++|+
T Consensus 1 LT~G~p~V~~v~~~~~----------~~~~~~~~lL~laaslE~~SeHPlA~AIv~~a~~~~~~~~-~~~~~~f~~i~G~ 69 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGD----------VATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTET-LGYCTDFQAVPGC 69 (165)
T ss_dssp CCCCCCCEEEEEECCC----------TTTSCHHHHHHHHHHHHTTSCSTTHHHHHHHHHHHHTCCC-CCCEEEEEEETTT
T ss_pred CCCceeEEEEEEeeCC----------cCCCCHHHHHHHHHHHHccCCChHHHHHHHHHHHhcCCCC-CCCcCceEEecCc
Confidence 8999999999876510 01246788999999999999999999999999765 4321 1123679999999
Q ss_pred eeEEEEcCe-----------------------------------EEEeccHHHHHhcCCCCcc-h-hhHHHHHhCCCeEE
Q 002310 665 GTVAIIEDR-----------------------------------KVSVGTIDWLRSHGVDTST-F-QEVEMEDLMNQSLV 707 (937)
Q Consensus 665 g~~~~i~~~-----------------------------------~~~~G~~~~l~~~~~~~~~-~-~~~~~~~~~~~~~~ 707 (937)
|+.+.+++. .|.+|+++||.++++.... . ......+..+++.+
T Consensus 70 Gv~a~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~~~~~~~~~~~~~~~~G~T~v 149 (165)
T 2arf_A 70 GIGCKVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMKGQTAI 149 (165)
T ss_dssp EEEEEEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCSSCHHHHHHHHHHHTTTSEEE
T ss_pred cEEEEEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCCCCHHHHHHHHHHHhCCCeEE
Confidence 999999886 8999999999987765432 1 12233455788999
Q ss_pred EEEECCEEEEEEEecC
Q 002310 708 YVGVDNMLAGLIYVED 723 (937)
Q Consensus 708 ~v~~~~~~lG~i~l~D 723 (937)
|++.|++++|+|++.|
T Consensus 150 ~va~dg~~~g~i~l~D 165 (165)
T 2arf_A 150 LVAIDGVLCGMIAIAD 165 (165)
T ss_dssp EEEETTEEEEEEEECC
T ss_pred EEEECCEEEEEEEEEC
Confidence 9999999999999988
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=4.9e-12 Score=127.70 Aligned_cols=152 Identities=16% Similarity=0.122 Sum_probs=117.3
Q ss_pred eEEEEEECCEEEE-EEEec------CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhH
Q 002310 705 SLVYVGVDNMLAG-LIYVE------DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEK 777 (937)
Q Consensus 705 ~~~~v~~~~~~lG-~i~l~------D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K 777 (937)
..+++..|++++- -..+. ..+.++..++|+.|++.|++++++||++...+..+++++|+. .+|.... .|
T Consensus 9 k~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~--~~~~~~k--~k 84 (180)
T 1k1e_A 9 KFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK--LFFLGKL--EK 84 (180)
T ss_dssp CEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC--EEEESCS--CH
T ss_pred eEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc--eeecCCC--Cc
Confidence 4566666665441 11111 135567889999999999999999999999999999999997 6776554 45
Q ss_pred HHHHHHHhcC-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChh----HHHHHHHHHHHHHHH
Q 002310 778 KRFINELQND-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLS----QLLVALELSRLTMKT 849 (937)
Q Consensus 778 ~~iV~~Lq~~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~----~l~~~i~~~R~~~~~ 849 (937)
...++.+.++ | ..|+||||+.||.+|++.|+++++++++.+..++.||+++.+++-. .+.+.+...|..+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~ 164 (180)
T 1k1e_A 85 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 164 (180)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhh
Confidence 6666554332 3 6799999999999999999999999988999999999999876543 444555557777888
Q ss_pred HHHHHHHHHHH
Q 002310 850 VKQNLWWAFGY 860 (937)
Q Consensus 850 i~~nl~~a~~~ 860 (937)
++.++.|++.-
T Consensus 165 ~~~~~~~~~~~ 175 (180)
T 1k1e_A 165 FDTAQGFLKSV 175 (180)
T ss_dssp HHCHHHHHHHG
T ss_pred hhhccchhhhh
Confidence 88888888764
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.29 E-value=3.9e-12 Score=129.81 Aligned_cols=152 Identities=16% Similarity=0.188 Sum_probs=121.0
Q ss_pred CCeEEEEEECCEEEEEEEecCcCChhHHHH-------HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEecc--C
Q 002310 703 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHV-------VNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV--K 773 (937)
Q Consensus 703 ~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~-------I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~--~ 773 (937)
+...+++..|+++..-....++..+++++. |+.|+++|+++.++||+....+..+++++|+. .+|... .
T Consensus 18 ~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~--~~~~~~kpk 95 (191)
T 3n1u_A 18 KIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVVDHRMEQLGIT--HYYKGQVDK 95 (191)
T ss_dssp TCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCC--EEECSCSSC
T ss_pred cCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCc--cceeCCCCh
Confidence 556777888887654111223333444444 99999999999999999999999999999997 677766 4
Q ss_pred hhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCC----hhHHHHHHHHHHHHHHH
Q 002310 774 PNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR----LSQLLVALELSRLTMKT 849 (937)
Q Consensus 774 Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~----l~~l~~~i~~~R~~~~~ 849 (937)
|+-...+++.++-....++||||+.||.+|++.|+++++++++.+..++.||+++.+++ +..+.+.+...|..+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~ 175 (191)
T 3n1u_A 96 RSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAEL 175 (191)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHH
Confidence 55555666666656678999999999999999999999999999999999999998876 66677777778888888
Q ss_pred HHHHHHH
Q 002310 850 VKQNLWW 856 (937)
Q Consensus 850 i~~nl~~ 856 (937)
+.+++..
T Consensus 176 ~~~~~~~ 182 (191)
T 3n1u_A 176 AITGYLK 182 (191)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 8877654
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.27 E-value=4e-12 Score=130.11 Aligned_cols=139 Identities=15% Similarity=0.218 Sum_probs=106.5
Q ss_pred CCCeEEEEEECCEEEEEEEecCcCChhHHHH-------HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccCh
Q 002310 702 MNQSLVYVGVDNMLAGLIYVEDRIRDDAAHV-------VNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 774 (937)
Q Consensus 702 ~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~-------I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~P 774 (937)
.+...+++..||++..--...++.++++++. |+.|+++|+++.++||++...+..+++++||. .+|....
T Consensus 23 ~~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~--~~~~~~k- 99 (195)
T 3n07_A 23 KQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQIVENRMKALGIS--LIYQGQD- 99 (195)
T ss_dssp HTCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC--EEECSCS-
T ss_pred hCCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc--EEeeCCC-
Confidence 3566788888887655222223334555555 99999999999999999999999999999997 6777664
Q ss_pred hhHHHHHHHHhc----CCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCCh----hHHHHHHHHHH
Q 002310 775 NEKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRL----SQLLVALELSR 844 (937)
Q Consensus 775 e~K~~iV~~Lq~----~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l----~~l~~~i~~~R 844 (937)
.|...++.+.+ ....|+|+||+.||.+|++.|+++++|+++.+..++.||+|+.+++- ..+.+.+..+|
T Consensus 100 -~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~ 176 (195)
T 3n07_A 100 -DKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAVREVCDLILQAR 176 (195)
T ss_dssp -SHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHT
T ss_pred -CcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhc
Confidence 45555555443 34579999999999999999999999999999999999999987653 33444444333
|
| >3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0 | Back alignment and structure |
|---|
Probab=99.27 E-value=7e-12 Score=106.71 Aligned_cols=70 Identities=29% Similarity=0.350 Sum_probs=64.4
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (937)
++.+|.|+||+|++|++.||++|++++||.+++||+.++++.|.|++...+. +++.++|+++||++.+..
T Consensus 2 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 2 RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKE--------EDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCH--------HHHHHHHHHHTCEEEEEE
T ss_pred cEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHCCCceEEcc
Confidence 4678999999999999999999999999999999999999999999887665 789999999999987653
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.3e-11 Score=124.19 Aligned_cols=116 Identities=19% Similarity=0.230 Sum_probs=92.7
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcC----CCEEEEEcCCcccHHHHHhC
Q 002310 732 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND----ENVVAMVGDGINDAAALASS 807 (937)
Q Consensus 732 ~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~----G~~VamvGDG~NDa~AL~~A 807 (937)
+++.|+++|+++.++||+....+..+++++||. ++... ..|.+.++.+.++ ...+.|+||+.||.+|++.|
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~---~~~~~--~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~a 121 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP---VLHGI--DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALV 121 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC---EEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe---eEeCC--CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHC
Confidence 899999999999999999999999999999996 66665 5677777666543 35799999999999999999
Q ss_pred CeeEEeCCChHHHHhhcCEEEeCCC----hhHHHHHHHHHHHHHHHHHH
Q 002310 808 HIGVAMGGGVGAASEVASVVLMGNR----LSQLLVALELSRLTMKTVKQ 852 (937)
Q Consensus 808 dVGIamg~gt~~a~~aADivL~~~~----l~~l~~~i~~~R~~~~~i~~ 852 (937)
+++++++++.+..++.||+++.+++ +..+.+.+...|..+.+..|
T Consensus 122 g~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~~~~~~~~~~~~ 170 (176)
T 3mmz_A 122 GWPVAVASAHDVVRGAARAVTTVPGGDGAIREIASWILGPSLDSLDKEG 170 (176)
T ss_dssp SEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTTTTC------
T ss_pred CCeEECCChhHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCccccccc
Confidence 9999999999999999999998877 44555555545554444444
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.21 E-value=3.2e-11 Score=124.99 Aligned_cols=97 Identities=23% Similarity=0.248 Sum_probs=87.4
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcC----CCEEEEEcCCcccHHHHHhC
Q 002310 732 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND----ENVVAMVGDGINDAAALASS 807 (937)
Q Consensus 732 ~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~----G~~VamvGDG~NDa~AL~~A 807 (937)
+++.|+++|+++.++||++...+..+++++||. .+|... .+|.+.++.+.++ ...|+||||+.||.+|+++|
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~--~~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~a 159 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT--HLYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQV 159 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC--EEECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTS
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc--hhhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHC
Confidence 999999999999999999999999999999997 778776 5677777776554 56899999999999999999
Q ss_pred CeeEEeCCChHHHHhhcCEEEeCCC
Q 002310 808 HIGVAMGGGVGAASEVASVVLMGNR 832 (937)
Q Consensus 808 dVGIamg~gt~~a~~aADivL~~~~ 832 (937)
+++++++++.+.+++.||+|+.+++
T Consensus 160 g~~~a~~~~~~~~~~~Ad~v~~~~~ 184 (211)
T 3ij5_A 160 GLSVAVADAHPLLLPKAHYVTRIKG 184 (211)
T ss_dssp SEEEECTTSCTTTGGGSSEECSSCT
T ss_pred CCEEEeCCccHHHHhhCCEEEeCCC
Confidence 9999999999999999999998764
|
| >4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A | Back alignment and structure |
|---|
Probab=99.20 E-value=3.6e-11 Score=100.63 Aligned_cols=67 Identities=28% Similarity=0.511 Sum_probs=60.7
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
++++|.|+||+|++|++.||++|++++||.+++||+.++++.|.| +...+. +++.++|+++||++.+
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~-~~~~~~--------~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY-HGETTP--------QILTDAVERAGYHARV 68 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEE-CTTCCH--------HHHHHHHHHTTCEEEE
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEE-CCCCCH--------HHHHHHHHHcCCceEe
Confidence 457899999999999999999999999999999999999999999 555565 7899999999998754
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.15 E-value=3.5e-11 Score=119.91 Aligned_cols=110 Identities=15% Similarity=0.145 Sum_probs=89.8
Q ss_pred CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH--HcCCCCceeEeccChhhHHHHHHHHhcC--
Q 002310 712 DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS--LVGIPKDKVLSGVKPNEKKRFINELQND-- 787 (937)
Q Consensus 712 ~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~--~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~-- 787 (937)
+++.++.+.++|. .+|+.|++.|+++.|+||+ ..+..+++ .+|+. ++.. +++|...++.+.++
T Consensus 30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~---~~~g--~~~K~~~l~~~~~~~g 96 (168)
T 3ewi_A 30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK---TEVS--VSDKLATVDEWRKEMG 96 (168)
T ss_dssp SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC---EECS--CSCHHHHHHHHHHHTT
T ss_pred CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE---EEEC--CCChHHHHHHHHHHcC
Confidence 3345566666665 3899999999999999999 67888899 67774 5543 46798888877654
Q ss_pred --CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChh
Q 002310 788 --ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLS 834 (937)
Q Consensus 788 --G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~ 834 (937)
...++|+||+.||.+|++.|+++++|+++.+..++.||+|+.+++=.
T Consensus 97 i~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~v~~~~~~~ 145 (168)
T 3ewi_A 97 LCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKCSGGR 145 (168)
T ss_dssp CCGGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCSEECSSCTTT
T ss_pred cChHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCCEEeCCCCCc
Confidence 35799999999999999999999999999999999999999865533
|
| >3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.13 E-value=6.6e-11 Score=100.54 Aligned_cols=68 Identities=25% Similarity=0.472 Sum_probs=61.4
Q ss_pred CccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccccc
Q 002310 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (937)
Q Consensus 124 ~~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (937)
.+.+.+|.|+||+|++|+.+||++|++ +||..++||+.++++.|.++ +. +.+.++|+++||++.+..
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~----~~--------~~i~~~i~~~Gy~~~~~~ 69 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE----DV--------DKYIKAVEAAGYQAKLRS 69 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG----GH--------HHHHHHHHHTTCEEEECC
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC----CH--------HHHHHHHHHcCCceEecC
Confidence 356789999999999999999999999 99999999999999999998 33 789999999999987765
Q ss_pred C
Q 002310 204 M 204 (937)
Q Consensus 204 ~ 204 (937)
+
T Consensus 70 ~ 70 (73)
T 3fry_A 70 S 70 (73)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.3e-10 Score=97.16 Aligned_cols=65 Identities=26% Similarity=0.409 Sum_probs=57.9
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (937)
.+.+|.| ||+|++|+++||++|++++|| +++||+.++++.|.++. ++ ++|.++|+++||++.+..
T Consensus 2 ~~~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~---~~--------~~i~~~i~~~Gy~~~~~~ 66 (68)
T 3iwl_A 2 PKHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEH---SM--------DTLLATLKKTGKTVSYLG 66 (68)
T ss_dssp CEEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESS---CH--------HHHHHHHHTTCSCEEEEE
T ss_pred ceEEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecC---CH--------HHHHHHHHHcCCceEecC
Confidence 4678999 999999999999999999999 99999999999999742 33 789999999999987653
|
| >1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A | Back alignment and structure |
|---|
Probab=99.05 E-value=4e-10 Score=94.46 Aligned_cols=68 Identities=29% Similarity=0.482 Sum_probs=61.7
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
.+..|.|+||+|++|+..|++.|++++||.++++|+.++++.|.|++...+. +.+.+.++++||++.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSV--------QKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCH--------HHHHHHHHHTTCCCEE
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHhcCCCeEe
Confidence 4578999999999999999999999999999999999999999999876665 7899999999998754
|
| >2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.05 E-value=4.6e-10 Score=93.86 Aligned_cols=67 Identities=21% Similarity=0.379 Sum_probs=61.1
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccc
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (937)
+.+..|.|+||+|++|+..|++.|++++||..+++|+.++++.|.|++...+. +.|.++++++||.+
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTL--------KDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCH--------HHHHHHHHHTTCEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCC
Confidence 45678999999999999999999999999999999999999999999876664 78999999999975
|
| >1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A | Back alignment and structure |
|---|
Probab=99.04 E-value=4.5e-10 Score=96.36 Aligned_cols=70 Identities=20% Similarity=0.396 Sum_probs=63.1
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccc
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (937)
..+..|.|+||+|++|++.||+.|++++||.++++|+.++++.|.|++...+. +.+.++++++||.+.+.
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~ 76 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTP--------KTLQEAIDDMGFDAVIH 76 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCH--------HHHHHHHHHHCCCEEEC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHHCCCceEec
Confidence 45688999999999999999999999999999999999999999999876654 78999999999987553
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.03 E-value=3.9e-10 Score=118.25 Aligned_cols=134 Identities=17% Similarity=0.188 Sum_probs=108.2
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--------------eeE-
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--------------KVL- 769 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--------------~v~- 769 (937)
..+++..||+++. -...+.+++.++|++|++.|++++++||+....+..+++++|+... .+.
T Consensus 6 kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~ 82 (227)
T 1l6r_A 6 RLAAIDVDGNLTD---RDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKK 82 (227)
T ss_dssp CEEEEEHHHHSBC---TTSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEE
T ss_pred EEEEEECCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEE
Confidence 4566667777654 2557889999999999999999999999999999999999998531 111
Q ss_pred e--------------------------------------------------------------ccCh--hhHHHHHHHHh
Q 002310 770 S--------------------------------------------------------------GVKP--NEKKRFINELQ 785 (937)
Q Consensus 770 a--------------------------------------------------------------r~~P--e~K~~iV~~Lq 785 (937)
. ++.| .+|...++.+.
T Consensus 83 ~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~ 162 (227)
T 1l6r_A 83 FFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLK 162 (227)
T ss_dssp SSCSHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHH
T ss_pred EeccHHHHHHHHHHHHHhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHH
Confidence 0 0113 57888887776
Q ss_pred cC-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 786 ND-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 786 ~~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+. | ..|+++||+.||.+|++.|++||+|+++.+..++.||+++.+++-..+.++++
T Consensus 163 ~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 163 EMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp HHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 53 2 46999999999999999999999999999999999999998888888887765
|
| >2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A | Back alignment and structure |
|---|
Probab=99.03 E-value=5.4e-10 Score=99.08 Aligned_cols=72 Identities=24% Similarity=0.344 Sum_probs=64.4
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhc---Ccccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSC---GFKSSLR 202 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~---Gy~~~~~ 202 (937)
.++.|.|+||+|++|++.||++|++++||.+++||+.++++.|.|++...+. ++|.++|+++ ||++.+.
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~--------~~i~~~i~~~g~Ggy~~~~~ 74 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTP--------ESLRKAIEAVSPGLYRVSIT 74 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCT--------HHHHHHHHTTSTTTCEEECC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHhccCCCeEEEEe
Confidence 3578999999999999999999999999999999999999999999876665 7899999999 5988776
Q ss_pred cCC
Q 002310 203 DMG 205 (937)
Q Consensus 203 ~~~ 205 (937)
.++
T Consensus 75 ~~~ 77 (90)
T 2g9o_A 75 SEV 77 (90)
T ss_dssp CCC
T ss_pred CCC
Confidence 553
|
| >3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A | Back alignment and structure |
|---|
Probab=99.02 E-value=6e-10 Score=94.44 Aligned_cols=68 Identities=21% Similarity=0.402 Sum_probs=61.9
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccc
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (937)
++.|.|+||+|++|+..||+.|++++||.++++|+.++++.|.|++...+. +.+.++++++||++.+.
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~ 70 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTP--------KTLQEAIDDMGFDAVIH 70 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHTTCCEEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEee
Confidence 568999999999999999999999999999999999999999999876664 78999999999987654
|
| >1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A | Back alignment and structure |
|---|
Probab=99.02 E-value=3.1e-10 Score=96.87 Aligned_cols=71 Identities=25% Similarity=0.363 Sum_probs=63.5
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccccc
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (937)
+.+..|.|+||+|++|+..||+.|++++||..+++|+.++++.|.|++...+. +.+.++++++||++.+.+
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQP--------PMIAEFIRELGFGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCH--------HHHHHHHHHHTSCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEECC
Confidence 45678999999999999999999999999999999999999999999876664 779999999999876544
|
| >1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A | Back alignment and structure |
|---|
Probab=99.02 E-value=4.8e-10 Score=93.94 Aligned_cols=68 Identities=25% Similarity=0.475 Sum_probs=61.3
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
.+..|.|+||+|++|+..|++.|++++||.++++|+.++++.|.|++...+. +.+.++++++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 70 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSP--------ETLRGAIEDMGFDATL 70 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCEEEE
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCH--------HHHHHHHHHCCCCcEe
Confidence 3568999999999999999999999999999999999999999999876554 7899999999998654
|
| >1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A | Back alignment and structure |
|---|
Probab=99.02 E-value=5.6e-10 Score=97.35 Aligned_cols=71 Identities=21% Similarity=0.402 Sum_probs=63.9
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
.++.|.|+||+|++|+..||+.|++++||..+++|+.++++.|.|++...+. +.+.++++++||.+.+...
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~~ 79 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISV--------EEMKKQIEAMGFPAFVKKQ 79 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCH--------HHHHHHHHHTTCCEECSCC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEecCC
Confidence 4678999999999999999999999999999999999999999999876664 7899999999998866543
|
| >1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 | Back alignment and structure |
|---|
Probab=99.00 E-value=7.2e-10 Score=91.61 Aligned_cols=64 Identities=20% Similarity=0.373 Sum_probs=58.9
Q ss_pred EEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccc
Q 002310 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (937)
Q Consensus 129 ~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (937)
.|.|+||+|++|+..||+.|++++||..+++|+.++++.|.|++...+. +++.+.++++||++.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~ 66 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQA--------TEICQAINELGYQAE 66 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHTTSSCEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCcc
Confidence 5899999999999999999999999999999999999999999876664 789999999999764
|
| >2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A | Back alignment and structure |
|---|
Probab=98.99 E-value=7.6e-10 Score=92.32 Aligned_cols=67 Identities=28% Similarity=0.523 Sum_probs=58.4
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
.+..|.|+||+|++|+..||+.|++++||.++++|+.++++.|.|++. .+. +.+.++++++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~--------~~i~~~i~~~G~~~~~ 69 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGE-TTP--------QILTDAVERAGYHARV 69 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC----CH--------HHHHHHHHHHTCEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC-CCH--------HHHHHHHHHcCCCcee
Confidence 457899999999999999999999999999999999999999999876 444 7899999999998653
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=4.7e-10 Score=110.95 Aligned_cols=105 Identities=21% Similarity=0.184 Sum_probs=87.6
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHH----hcCCCEEEEEcCCcccHHHHHhC
Q 002310 732 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINEL----QNDENVVAMVGDGINDAAALASS 807 (937)
Q Consensus 732 ~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~L----q~~G~~VamvGDG~NDa~AL~~A 807 (937)
+++.|++.|+++.++||++...+..+.+++|+. .++....| |.+.++.+ .-....++||||+.||.++++.|
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~--~~~~~~kp--k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~a 114 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVD--YLFQGVVD--KLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRV 114 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCS--EEECSCSC--HHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTS
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC--EeecccCC--hHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 899999999999999999999999999999997 67766654 44444443 32345799999999999999999
Q ss_pred CeeEEeCCChHHHHhhcCEEEeCCChhH-HHHHH
Q 002310 808 HIGVAMGGGVGAASEVASVVLMGNRLSQ-LLVAL 840 (937)
Q Consensus 808 dVGIamg~gt~~a~~aADivL~~~~l~~-l~~~i 840 (937)
+++++++++.+..++.||+++.+++... +.+++
T Consensus 115 g~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~ 148 (164)
T 3e8m_A 115 GIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFV 148 (164)
T ss_dssp SEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHH
T ss_pred CCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHH
Confidence 9999999999999999999999888554 43333
|
| >2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.2e-09 Score=89.93 Aligned_cols=65 Identities=23% Similarity=0.331 Sum_probs=59.6
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccc
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (937)
...|.|+||+|++|+..|++.|++++||.++++|+.++++.|.|++...+. +.+.+.++++||.+
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 3 QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSV--------KDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHTTCEE
T ss_pred EEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCc
Confidence 467999999999999999999999999999999999999999999876664 77899999999975
|
| >2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A | Back alignment and structure |
|---|
Probab=98.98 E-value=9.9e-10 Score=91.32 Aligned_cols=65 Identities=38% Similarity=0.529 Sum_probs=58.8
Q ss_pred EEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccc
Q 002310 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (937)
Q Consensus 129 ~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (937)
.|.|+||+|++|+..||+.|++++||.++++|+.++++.|.|++. .+. +++.++++++||++.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~--------~~i~~~i~~~Gy~~~~~ 67 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPG-TSP--------DALTAAVAGLGYKATLA 67 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTT-SCH--------HHHHHHHHTTTSEEECC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCC-CCH--------HHHHHHHHHCCCceEeC
Confidence 588999999999999999999999999999999999999999976 343 78999999999987643
|
| >1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A | Back alignment and structure |
|---|
Probab=98.98 E-value=1.2e-09 Score=92.09 Aligned_cols=68 Identities=21% Similarity=0.297 Sum_probs=60.5
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccc
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (937)
+.+..|.|+||+|++|++.|++.|++++||.+++||+.++++.|.|++. . . +.+.++++++||++.+.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~-~-~--------~~i~~~i~~~Gy~~~~~ 69 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND-I-R--------AQVESALQKAGYSLRDE 69 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC-C-H--------HHHHHHHHHHTCEEEEC
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCC-C-H--------HHHHHHHHHcCCccccc
Confidence 3467899999999999999999999999999999999999999999874 2 3 67999999999987643
|
| >2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.4e-09 Score=90.33 Aligned_cols=67 Identities=28% Similarity=0.431 Sum_probs=60.6
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (937)
.+..|.|+||+|++|+..||+.|++++||..+++|+.++++.|.|++...+. +.+.++++++||.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSE--------ITIQERIAALGYTLA 69 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCT--------HHHHHHHHTTTCEEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCcc
Confidence 4567999999999999999999999999999999999999999999866665 779999999999753
|
| >1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.1e-09 Score=89.93 Aligned_cols=64 Identities=17% Similarity=0.287 Sum_probs=58.1
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccc
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (937)
+..|.|+||+|++|+..||+.|++++||.++++|+.++++.|.|++.. +. +.+.++++++||++
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~-~~--------~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPA-TQ--------DLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTC-CH--------HHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCC-CH--------HHHHHHHHHcCCCc
Confidence 357899999999999999999999999999999999999999998765 43 78999999999975
|
| >1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A | Back alignment and structure |
|---|
Probab=98.94 E-value=2e-09 Score=90.97 Aligned_cols=69 Identities=32% Similarity=0.503 Sum_probs=62.1
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
..+..|.|+||+|++|+..|++.|++++||..+++|+.++++.|.|++...+. +.+.+.++++||++.+
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 73 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGT--------AAIQEKIEKLGYHVVI 73 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCH--------HHHHHHHHHHTCEEEC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHCCCceec
Confidence 45678999999999999999999999999999999999999999999876664 7789999999998654
|
| >1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.1e-09 Score=92.45 Aligned_cols=68 Identities=28% Similarity=0.375 Sum_probs=61.1
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
.+..|.|+||+|++|+..|++.|++++||..+++|+.++++.|.|++...+. +.+.++++++||.+.+
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 71 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGP--------RDIIHTIESLGFEPSL 71 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHH--------HHHHHHHHHHHCEEEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCcee
Confidence 3568999999999999999999999999999999999999999999876554 6789999999998654
|
| >1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.7e-09 Score=92.59 Aligned_cols=70 Identities=29% Similarity=0.465 Sum_probs=62.6
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (937)
.+..|.|+||+|++|+..|++.|++++||..+++|+.++++.|.|++...+. +.+.++++++||.+.+..
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~~~ 72 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASV--------SDLKEAVDKLGYKLKLKG 72 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCH--------HHHHHHHHHHTSEEEECC
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCeEEecC
Confidence 4578999999999999999999999999999999999999999999876654 678999999999876543
|
| >1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B | Back alignment and structure |
|---|
Probab=98.92 E-value=1.7e-09 Score=90.50 Aligned_cols=67 Identities=24% Similarity=0.484 Sum_probs=60.0
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccc
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (937)
+..|.|+||+|++|+..|++.|++++||.++++|+.++++.|.|+ ...+. +.+.++++++||++.+.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~--------~~i~~~i~~~G~~~~~~ 69 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD-NEVTA--------DSIKEIIEDCGFDCEIL 69 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC-TTSCH--------HHHHHHHHHHTCCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC-CCCCH--------HHHHHHHHHCCCceEEc
Confidence 467999999999999999999999999999999999999999998 55554 78999999999987543
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.90 E-value=3.1e-09 Score=121.77 Aligned_cols=124 Identities=23% Similarity=0.281 Sum_probs=107.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEecc-----------------ChhhHHHHHHHHhc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV-----------------KPNEKKRFINELQN 786 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~-----------------~Pe~K~~iV~~Lq~ 786 (937)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+. .+|+.. .++.|.++++.+.+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~--~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~ 333 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLD--YVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ 333 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCS--EEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCcc--ceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence 79999999999999999999999999999999999999996 555421 26778887776654
Q ss_pred C-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHH
Q 002310 787 D-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTV 850 (937)
Q Consensus 787 ~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i 850 (937)
+ | ..+.||||+.||.+|++.|++|+++ ++.+..++.||+++..+++..+..++.++|.-+...
T Consensus 334 ~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~~~ 400 (415)
T 3p96_A 334 RAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGEIEAA 400 (415)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHHHH
T ss_pred HcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHHHh
Confidence 3 3 5699999999999999999999999 677888899999999999999999999888766543
|
| >2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.87 E-value=7e-09 Score=92.68 Aligned_cols=72 Identities=25% Similarity=0.219 Sum_probs=64.2
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
+.+..|.|+||+|++|+..|++.|.+++||..++||+.++++.|.|++...+. +.+.++++++||.+.+...
T Consensus 15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~~ 86 (95)
T 2kkh_A 15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISP--------FQIAKALNEARLEANVRVN 86 (95)
T ss_dssp SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCCEEESCC
T ss_pred eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEEecC
Confidence 45688999999999999999999999999999999999999999999876554 7789999999998766544
|
| >1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A | Back alignment and structure |
|---|
Probab=98.86 E-value=3.1e-09 Score=103.40 Aligned_cols=71 Identities=28% Similarity=0.449 Sum_probs=64.6
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
.++.|.|+||+|++|++.||+.|++++||.+++||+.++++.|.|++...+. ++|.++|+++||++.+..+
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~~ 144 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASV--------SDLKEAVDKLGYKLKLKGE 144 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCCEEESCS
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHHcCCCeEEcCc
Confidence 4578999999999999999999999999999999999999999999877765 7899999999999876544
|
| >2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.86 E-value=3.8e-09 Score=102.38 Aligned_cols=68 Identities=29% Similarity=0.403 Sum_probs=62.3
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
.++.|.|+||+|++|++.||+.|++++||.+++||+.++++.|.|++...+. ++|.++|+++||++.+
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~ 147 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGP--------RDIIKIIEEIGFHASL 147 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCH--------HHHHHHHHHHTCEEEC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCH--------HHHHHHHHhCCCceEe
Confidence 3578999999999999999999999999999999999999999999877665 7899999999998754
|
| >1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A | Back alignment and structure |
|---|
Probab=98.86 E-value=4.8e-09 Score=88.76 Aligned_cols=65 Identities=20% Similarity=0.367 Sum_probs=57.8
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCC-CceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQP-QVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~-GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
..+..|.|+ |+|++|+++||++|++++ ||.+++||+.++++.|.++ .+. +++.++++++||++.+
T Consensus 4 m~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~---~~~--------~~i~~~i~~~Gy~~~~ 69 (73)
T 1cc8_A 4 IKHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPY--------DFILEKIKKTGKEVRS 69 (73)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCH--------HHHHHHHHTTSSCEEE
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEe---CCH--------HHHHHHHHHhCCCcee
Confidence 356789999 999999999999999999 9999999999999999973 233 7899999999998754
|
| >2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A | Back alignment and structure |
|---|
Probab=98.85 E-value=2.6e-09 Score=88.13 Aligned_cols=62 Identities=31% Similarity=0.513 Sum_probs=54.7
Q ss_pred EEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 129 ~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
.|.|+||+|++|+..||+.|++++||.++++|+.++++.| +. ..+. +.+.++++++||++..
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v--~~-~~~~--------~~i~~~i~~~Gy~~~~ 64 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALV--EG-TADP--------KALVQAVEEEGYKAEV 64 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEE--CS-CCCH--------HHHHHHHHTTTCEEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEE--CC-CCCH--------HHHHHHHHHcCCCcEe
Confidence 5889999999999999999999999999999999999999 33 3343 7899999999998653
|
| >2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.85 E-value=3.3e-09 Score=92.98 Aligned_cols=64 Identities=23% Similarity=0.397 Sum_probs=57.0
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccc
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (937)
..+..|.|+||+|++|++.||++|++++||.+++||+.++++.|.++ .++ ++|.++|+++||++
T Consensus 21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~---~~~--------~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV---SDA--------AHIAEIITAAGYTP 84 (85)
T ss_dssp -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC---CCH--------HHHHHHHHHTTCCC
T ss_pred ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec---CCH--------HHHHHHHHHcCCCC
Confidence 45678999999999999999999999999999999999999999874 333 78999999999975
|
| >2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A | Back alignment and structure |
|---|
Probab=98.84 E-value=4.4e-09 Score=85.62 Aligned_cols=61 Identities=23% Similarity=0.431 Sum_probs=54.6
Q ss_pred EEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccc
Q 002310 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (937)
Q Consensus 128 ~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (937)
..|.|+||+|++|+..||+.|++++||.++++|+.++++.|.++ .+. +.+.++++++||++
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~---~~~--------~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA---LGE--------EQLRTAIASAGYEV 63 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECS---SCH--------HHHHHHHHHTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEec---CCH--------HHHHHHHHHcCCCC
Confidence 56999999999999999999999999999999999999999842 233 67999999999975
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.82 E-value=6.3e-09 Score=106.99 Aligned_cols=118 Identities=19% Similarity=0.235 Sum_probs=96.4
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEecc-----------------ChhhHHHHHHHHh
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV-----------------KPNEKKRFINELQ 785 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~-----------------~Pe~K~~iV~~Lq 785 (937)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+. .+|... ....|.+.++.+.
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~--~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~ 151 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLD--AAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQ 151 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcc--hhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHH
Confidence 468999999999999999999999999999999999999996 333322 2456666666554
Q ss_pred c----CCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002310 786 N----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 786 ~----~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~ 843 (937)
+ ....+.|+||+.||.+|++.|+++++| ++.+..++.||+++.+++|..+..++.+-
T Consensus 152 ~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 152 RLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp HHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred HHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhccc
Confidence 3 235699999999999999999999999 67788889999999999999988777653
|
| >2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.5e-08 Score=91.25 Aligned_cols=68 Identities=22% Similarity=0.368 Sum_probs=60.2
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
..+++|.|+ |+|++|+++||++|++++||.+++||+.+++++|.++ .+. ++|.++|+++||++.+...
T Consensus 18 ~~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~---~~~--------~~i~~~i~~~Gy~~~~~~~ 85 (98)
T 2crl_A 18 LCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT---LPS--------QEVQALLEGTGRQAVLKGM 85 (98)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES---SCH--------HHHHHHHHTTTSCEEEEES
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe---CCH--------HHHHHHHHHhCCceEEccC
Confidence 456789999 9999999999999999999999999999999999984 233 7899999999999876544
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=1.2e-08 Score=103.37 Aligned_cols=107 Identities=19% Similarity=0.151 Sum_probs=86.8
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhc-CC---CEEEEEcCCcccHHHHHh
Q 002310 731 HVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQN-DE---NVVAMVGDGINDAAALAS 806 (937)
Q Consensus 731 e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~-~G---~~VamvGDG~NDa~AL~~ 806 (937)
.+++.|++.|+++.++||++...+..+.+++|+. .+|....| |...++.+.+ .| ..++||||+.||.++++.
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~--~~~~~~kp--k~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ 135 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGIT--HLYQGQSN--KLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEK 135 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC--EEECSCSC--SHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTT
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc--eeecCCCC--CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence 4899999999999999999999999999999997 67766544 4555555433 23 579999999999999999
Q ss_pred CCeeEEeCCChHHHHhhcCEEEeCCChhHHH-HHHH
Q 002310 807 SHIGVAMGGGVGAASEVASVVLMGNRLSQLL-VALE 841 (937)
Q Consensus 807 AdVGIamg~gt~~a~~aADivL~~~~l~~l~-~~i~ 841 (937)
|+++++++++.+..++.||+++.+.+-..+. ++++
T Consensus 136 ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 136 VGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp SSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred CCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 9999999877777888999999876544444 5544
|
| >2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.77 E-value=7.1e-09 Score=85.84 Aligned_cols=62 Identities=18% Similarity=0.327 Sum_probs=55.6
Q ss_pred EEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccc
Q 002310 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (937)
Q Consensus 128 ~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (937)
..|.|+||+|++|+..|++.|+++ ||..+++|+.++++.|.+++. +++.++++++||++.+.
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~------------~~i~~~i~~~Gy~~~~~ 64 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL------------DSVLKKLEEIDYPVESY 64 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH------------HHHHHHHHTTTCCCCBC
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH------------HHHHHHHHHcCCceeeE
Confidence 579999999999999999999999 999999999999999998753 25888999999987643
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.75 E-value=3.5e-08 Score=97.13 Aligned_cols=111 Identities=15% Similarity=0.204 Sum_probs=88.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhH--HHHHHHHhcCCCEEEEEcCCcccHH
Q 002310 725 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEK--KRFINELQNDENVVAMVGDGINDAA 802 (937)
Q Consensus 725 lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K--~~iV~~Lq~~G~~VamvGDG~NDa~ 802 (937)
+.+++.++++.|++.|+++.++||.....+..+.+++|+. .+|....|... ..+++.++-....+.||||+.||.+
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~--~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 114 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE--EIYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIE 114 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC--EEEECC--CHHHHHHHHHHTTCCGGGEEEEECSGGGHH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH--hhccCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 4577899999999999999999999999999999999997 66665444322 2233333334457999999999999
Q ss_pred HHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHH
Q 002310 803 ALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLL 837 (937)
Q Consensus 803 AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~ 837 (937)
+.+.|++++++.++.+..++.||+++.+.+-..+.
T Consensus 115 ~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 115 VMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 99999999999878888888999998876655444
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.3e-08 Score=112.16 Aligned_cols=115 Identities=17% Similarity=0.230 Sum_probs=96.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEecc-----------------ChhhHHHHHHHHhc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV-----------------KPNEKKRFINELQN 786 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~-----------------~Pe~K~~iV~~Lq~ 786 (937)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+. .+|+.. .++.|.++++.+.+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~--~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~ 256 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLD--YAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAA 256 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS--EEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCC--eEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999996 555432 34667666655433
Q ss_pred ----CCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 787 ----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 787 ----~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
....+.||||+.||.+|++.|++|+++ ++.+..++.+|.++..+++..+..+++
T Consensus 257 ~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 257 RLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred HcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 335799999999999999999999999 467777889999999899998877653
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=1.6e-08 Score=103.11 Aligned_cols=114 Identities=18% Similarity=0.295 Sum_probs=90.6
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-----------------cChhhHHHHHHHHh
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------------VKPNEKKRFINELQ 785 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-----------------~~Pe~K~~iV~~Lq 785 (937)
-++.|+++++++.|++.|+++.++||+....+..+.+.+|+. .++.. ..+..|.+.++.+.
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~ 152 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD--YAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 152 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC--eEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHH
Confidence 356789999999999999999999999999888899999985 23221 22457776666543
Q ss_pred c-CC---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHH
Q 002310 786 N-DE---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 786 ~-~G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
+ .| ..+.|+||+.||.+|++.|+++++|+ +.+..++.||.++.++++..+..+
T Consensus 153 ~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~~ 209 (211)
T 1l7m_A 153 KIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILKY 209 (211)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGGG
T ss_pred HHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHHh
Confidence 3 33 45999999999999999999999998 556667889999987778876543
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.71 E-value=4e-08 Score=108.94 Aligned_cols=115 Identities=18% Similarity=0.258 Sum_probs=90.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccC------------------------------
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVK------------------------------ 773 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~------------------------------ 773 (937)
.+++++.++++.|++ |+.+.++|+|....+..+.+.+++.. .+++...
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRG-ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCS-EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhh-hhcccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 578999999999999 99999999999777778888888731 2322110
Q ss_pred ------------------------hhhHHHHHHHHhcCC--CEEEEEcCCcccHHHHHhC----CeeEEeCCChHHHHhh
Q 002310 774 ------------------------PNEKKRFINELQNDE--NVVAMVGDGINDAAALASS----HIGVAMGGGVGAASEV 823 (937)
Q Consensus 774 ------------------------Pe~K~~iV~~Lq~~G--~~VamvGDG~NDa~AL~~A----dVGIamg~gt~~a~~a 823 (937)
+.+|...++.++.+. ++|+++||+.||.+|++.| ++||+| ++.+.+++.
T Consensus 181 l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~~ 259 (332)
T 1y8a_A 181 FRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALKH 259 (332)
T ss_dssp HHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHTT
T ss_pred HHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHhh
Confidence 112555555554432 4599999999999999999 999999 999999999
Q ss_pred cCEEEeCCChhHHHHHHH
Q 002310 824 ASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 824 ADivL~~~~l~~l~~~i~ 841 (937)
||+|+.+++...+..+++
T Consensus 260 Ad~v~~~~~~dGV~~~l~ 277 (332)
T 1y8a_A 260 ADVVIISPTAMSEAKVIE 277 (332)
T ss_dssp CSEEEECSSTHHHHHHHH
T ss_pred CcEEecCCCCCHHHHHHH
Confidence 999999988877666554
|
| >2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.69 E-value=2.9e-08 Score=101.84 Aligned_cols=71 Identities=25% Similarity=0.411 Sum_probs=63.4
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
.++.|.|+||+|++|++.||+.|++++||..++||+.++++.|.|++...+. ++|.++|+++||.+.+...
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~~ 192 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISP--------EELRAAIEDMGFEASVVSE 192 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTSCEEEC--
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEEcCC
Confidence 4688999999999999999999999999999999999999999999877665 7899999999998766543
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.66 E-value=2.3e-08 Score=101.04 Aligned_cols=109 Identities=20% Similarity=0.386 Sum_probs=90.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--ee------E--eccChhhHHHHHHHHhcCCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KV------L--SGVKPNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v------~--ar~~Pe~K~~iV~~Lq~~G~~Vam 793 (937)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+... .+ + ....|..|...++.+ ....+.|
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~~i~ 155 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGFILA 155 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSCEEE
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcCcEEE
Confidence 7899999999999999999999999999999999 99998521 00 0 123568899999988 4567899
Q ss_pred EcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 794 VGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+||+.||.+|++.|+++|+|+++.+ .||+++. ++..+.++++
T Consensus 156 iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 156 MGDGYADAKMFERADMGIAVGREIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp EECTTCCHHHHHHCSEEEEESSCCT----TCSEEES--SHHHHHHHHH
T ss_pred EeCCHHHHHHHHhCCceEEECCCCc----cccEEEc--cHHHHHHHHH
Confidence 9999999999999999999997665 7899884 5777766654
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.64 E-value=1.1e-07 Score=97.00 Aligned_cols=115 Identities=17% Similarity=0.259 Sum_probs=89.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEe-----------------ccChhhHHHHHHHH-h
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-----------------GVKPNEKKRFINEL-Q 785 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~a-----------------r~~Pe~K~~iV~~L-q 785 (937)
.+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+....+++ ...|+.|.+.++.+ .
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG 161 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence 47899999999999999999999999999999999999996433332 23456777777665 4
Q ss_pred cCCCEEEEEcCCcccHHHHHh--CCeeEEe--CCChHHHHhhcCEEEeCCChhHHHHHH
Q 002310 786 NDENVVAMVGDGINDAAALAS--SHIGVAM--GGGVGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 786 ~~G~~VamvGDG~NDa~AL~~--AdVGIam--g~gt~~a~~aADivL~~~~l~~l~~~i 840 (937)
-....+.|+||+.||.+|+++ +.+++++ +...+..++.||.++ +++..+..++
T Consensus 162 ~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~--~~~~el~~~l 218 (219)
T 3kd3_A 162 LIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVA--RNVAELASLI 218 (219)
T ss_dssp GCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEE--SSHHHHHHHH
T ss_pred CCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceee--CCHHHHHHhh
Confidence 456789999999999999976 3355555 456677788899987 4677766553
|
| >2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.58 E-value=7.5e-08 Score=93.10 Aligned_cols=69 Identities=23% Similarity=0.387 Sum_probs=62.1
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
+.+..|.|+||+|++|++.||+.|++++||.+++||+.++++.|.|++...+. +.+.+++++.||.+..
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 71 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQP--------LEIAQFIQDLGFEAAV 71 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCEEEE
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCH--------HHHHHHHhcCCCceEe
Confidence 45678999999999999999999999999999999999999999998866554 6789999999998754
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.56 E-value=3.6e-07 Score=93.23 Aligned_cols=116 Identities=17% Similarity=0.190 Sum_probs=93.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEe----------ccChhhHHHHHHHHhcCCCE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS----------GVKPNEKKRFINELQNDENV 790 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~a----------r~~Pe~K~~iV~~Lq~~G~~ 790 (937)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.. +.+.. .-.|+.|...++.+......
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~~ 147 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR 147 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCCE
Confidence 6789999999999999 9999999999999999999999963 11211 14578899999999888889
Q ss_pred EEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 791 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+.||||+.||.+|.+.|++++++....+....+.+++. -+++..+..+++
T Consensus 148 ~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~ 197 (206)
T 1rku_A 148 VIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA-VHTYEDLKREFL 197 (206)
T ss_dssp EEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCE-ECSHHHHHHHHH
T ss_pred EEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhcc-ccchHHHHHHHH
Confidence 99999999999999999999998655444444455542 367888776653
|
| >2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A | Back alignment and structure |
|---|
Probab=98.54 E-value=9.3e-08 Score=79.93 Aligned_cols=62 Identities=23% Similarity=0.347 Sum_probs=53.5
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccccc
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (937)
+..|.|+||+|++|+..||+.|++++||.+++||+.++++.|.++.. .+.|+++||.+....
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~---------------~~~i~~~Gy~~~~~~ 65 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS---------------IQQVEQAGAFEHLKI 65 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC---------------HHHHHHHHTTTTCEE
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc---------------HHHHHHhCCCccccc
Confidence 56899999999999999999999999999999999999999988651 235678899876543
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.54 E-value=6.1e-07 Score=96.98 Aligned_cols=134 Identities=17% Similarity=0.247 Sum_probs=101.5
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc------------------
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 766 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------ 766 (937)
..+++..||+++- -...+-+.+.++++++++.|+++.+.||-....+..+.+++|++..
T Consensus 7 kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~ 83 (290)
T 3dnp_A 7 QLLALNIDGALLR---SNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFF 83 (290)
T ss_dssp CEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSCSE
T ss_pred eEEEEcCCCCCCC---CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCEEE
Confidence 4567777887652 2446788999999999999999999999999999999999987510
Q ss_pred -----------------------------eeEe-cc--------------------------------------------
Q 002310 767 -----------------------------KVLS-GV-------------------------------------------- 772 (937)
Q Consensus 767 -----------------------------~v~a-r~-------------------------------------------- 772 (937)
..+. +.
T Consensus 84 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~ 163 (290)
T 3dnp_A 84 EKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEV 163 (290)
T ss_dssp ECCCCHHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEEEE
T ss_pred ecCCCHHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEEEE
Confidence 0000 00
Q ss_pred --Chhh---------------------------------HHHHHHHHhcC-C---CEEEEEcCCcccHHHHHhCCeeEEe
Q 002310 773 --KPNE---------------------------------KKRFINELQND-E---NVVAMVGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 773 --~Pe~---------------------------------K~~iV~~Lq~~-G---~~VamvGDG~NDa~AL~~AdVGIam 813 (937)
.|++ |..-++.+.+. | ..|+++||+.||.+|++.|++||+|
T Consensus 164 ~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 243 (290)
T 3dnp_A 164 YTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM 243 (290)
T ss_dssp ECCGGGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred eCCHHHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe
Confidence 1111 33333333221 2 3589999999999999999999999
Q ss_pred CCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 814 GGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 814 g~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+++.+..++.||.|+.+++=..+.++++
T Consensus 244 ~na~~~~k~~Ad~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 244 GNAVPEIKRKADWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp TTSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred cCCcHHHHHhcCEECCCCCccHHHHHHH
Confidence 9999999999999998877777877776
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=1.8e-07 Score=95.31 Aligned_cols=118 Identities=18% Similarity=0.157 Sum_probs=91.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC----ceeEeccChhhH------HHHHHHHhcCCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK----DKVLSGVKPNEK------KRFINELQNDENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~----~~v~ar~~Pe~K------~~iV~~Lq~~G~~Vam 793 (937)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++.-....| ..+.+.+.-....+.|
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~~~i~ 149 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVM 149 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence 567899999999999999999999999999999999999841 234433222222 3344444334457999
Q ss_pred EcCCcccHHHHHhCCe-eEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002310 794 VGDGINDAAALASSHI-GVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 794 vGDG~NDa~AL~~AdV-GIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~ 843 (937)
|||+.||..|.+.|++ +|+|+.+.+..++.||+++ +++..|...++..
T Consensus 150 iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~ 198 (205)
T 3m9l_A 150 VGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAE 198 (205)
T ss_dssp EESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHT
T ss_pred ECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhc
Confidence 9999999999999999 9999977766777899987 5788888776643
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.44 E-value=7e-07 Score=96.42 Aligned_cols=52 Identities=21% Similarity=0.207 Sum_probs=48.1
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.|+++||+.||.+|++.|++||||+++.+..++.||.|..+++=..+.++++
T Consensus 229 e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 229 EVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred HEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 4899999999999999999999999999999999999998888778887765
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.43 E-value=1.3e-06 Score=90.64 Aligned_cols=96 Identities=15% Similarity=0.123 Sum_probs=78.3
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEe-----------------ccChhhHHHHHHHHh
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-----------------GVKPNEKKRFINELQ 785 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~a-----------------r~~Pe~K~~iV~~Lq 785 (937)
..+.|++.+.++.|++.|+++.++|+.....+..+++.+|+. .+++ ...+..|.+.++.+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~ 168 (232)
T 3fvv_A 91 PSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ--HLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWL 168 (232)
T ss_dssp GGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC--EEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC--EEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHH
Confidence 358999999999999999999999999999999999999996 2322 123467877776543
Q ss_pred -cCC------CEEEEEcCCcccHHHHHhCCeeEEeCCChHHH
Q 002310 786 -NDE------NVVAMVGDGINDAAALASSHIGVAMGGGVGAA 820 (937)
Q Consensus 786 -~~G------~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a 820 (937)
+.| ..+.|+||+.||.+|++.|++++++.......
T Consensus 169 ~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~l~ 210 (232)
T 3fvv_A 169 AGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLR 210 (232)
T ss_dssp HHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHHHH
T ss_pred HHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHHHH
Confidence 344 57999999999999999999999997554433
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.43 E-value=4.8e-07 Score=97.22 Aligned_cols=134 Identities=22% Similarity=0.306 Sum_probs=83.6
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC------------------c
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK------------------D 766 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~------------------~ 766 (937)
..+++..||+++- -...+-+.+.+++++|++.|+++.+.||-....+..+.+++|+.. .
T Consensus 6 kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~ 82 (279)
T 3mpo_A 6 KLIAIDIDGTLLN---EKNELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGK 82 (279)
T ss_dssp CEEEECC--------------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSC
T ss_pred EEEEEcCcCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCC
Confidence 4567777888763 234678899999999999999999999999999999999998742 0
Q ss_pred eeEecc-----------------------------------------------------------------------Chh
Q 002310 767 KVLSGV-----------------------------------------------------------------------KPN 775 (937)
Q Consensus 767 ~v~ar~-----------------------------------------------------------------------~Pe 775 (937)
.++.+. .++
T Consensus 83 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~ 162 (279)
T 3mpo_A 83 VLTNHSLTYEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQ 162 (279)
T ss_dssp EEEECCCCHHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHH
T ss_pred EEEecCCCHHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHH
Confidence 011000 011
Q ss_pred h----------------------------------HHHHHHHHhc-CC---CEEEEEcCCcccHHHHHhCCeeEEeCCCh
Q 002310 776 E----------------------------------KKRFINELQN-DE---NVVAMVGDGINDAAALASSHIGVAMGGGV 817 (937)
Q Consensus 776 ~----------------------------------K~~iV~~Lq~-~G---~~VamvGDG~NDa~AL~~AdVGIamg~gt 817 (937)
+ |..-++.+.+ .| ..|+++||+.||.+|++.|++||+|+++.
T Consensus 163 ~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~ 242 (279)
T 3mpo_A 163 VIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAI 242 (279)
T ss_dssp HHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---C
T ss_pred HHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCC
Confidence 1 2222222221 12 34899999999999999999999999999
Q ss_pred HHHHhhcCEEEeCCChhHHHHHHH
Q 002310 818 GAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 818 ~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+..++.||.|..+++=..|.++|+
T Consensus 243 ~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 243 DEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHCSCBC------CHHHHHC
T ss_pred HHHHHhcceeccCCCccHHHHHHH
Confidence 999999999988777777776664
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.43 E-value=6e-07 Score=93.35 Aligned_cols=119 Identities=18% Similarity=0.243 Sum_probs=91.9
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-cc------ChhhHHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r~------~Pe~K~~iV~~Lq~~G~~Vam 793 (937)
..+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ .. .|+--..+.+.+.-....++|
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~ 182 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVV 182 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 4678999999999999999999999999999999999999842 12222 21 233334555666555567999
Q ss_pred EcCCcccHHHHHhCCe---eEEeCCCh-HHHHh-hcCEEEeCCChhHHHHHHHHH
Q 002310 794 VGDGINDAAALASSHI---GVAMGGGV-GAASE-VASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 794 vGDG~NDa~AL~~AdV---GIamg~gt-~~a~~-aADivL~~~~l~~l~~~i~~~ 843 (937)
|||+.||..|++.|++ +|++|.+. +..++ .+|+++ +++..+..+++.+
T Consensus 183 vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~ 235 (237)
T 4ex6_A 183 IGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDG 235 (237)
T ss_dssp EESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC
T ss_pred EcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHcc
Confidence 9999999999999999 88888443 44444 799988 5788888887653
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.43 E-value=6.7e-07 Score=96.65 Aligned_cols=137 Identities=17% Similarity=0.172 Sum_probs=100.0
Q ss_pred CCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc---------------
Q 002310 702 MNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--------------- 766 (937)
Q Consensus 702 ~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--------------- 766 (937)
.....+++..||+++- =...+-+.+.++|++|++.|+++++.||-....+..+.+++|++..
T Consensus 19 ~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~ 95 (285)
T 3pgv_A 19 GMYQVVASDLDGTLLS---PDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQ 95 (285)
T ss_dssp --CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSC
T ss_pred CcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCC
Confidence 3456788889998753 2446888999999999999999999999999999999999887310
Q ss_pred ----------------e-----------eEec-------------------------------------------cChhh
Q 002310 767 ----------------K-----------VLSG-------------------------------------------VKPNE 776 (937)
Q Consensus 767 ----------------~-----------v~ar-------------------------------------------~~Pe~ 776 (937)
. ++.. ..|+.
T Consensus 96 ~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~ 175 (285)
T 3pgv_A 96 QIFAHNLDRDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEH 175 (285)
T ss_dssp EEEECCCCHHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHH
T ss_pred EEEecCCCHHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHH
Confidence 0 0000 11222
Q ss_pred HHHHHHHHh----------------------------------c-CC---CEEEEEcCCcccHHHHHhCCeeEEeCCChH
Q 002310 777 KKRFINELQ----------------------------------N-DE---NVVAMVGDGINDAAALASSHIGVAMGGGVG 818 (937)
Q Consensus 777 K~~iV~~Lq----------------------------------~-~G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~ 818 (937)
..++.+.++ + .| ..|+++||+.||.+|++.|++||||+++.+
T Consensus 176 ~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~ 255 (285)
T 3pgv_A 176 LLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQ 255 (285)
T ss_dssp HHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCH
Confidence 122222222 1 12 358999999999999999999999999999
Q ss_pred HHHhhcCE--EEeCCChhHHHHHHH
Q 002310 819 AASEVASV--VLMGNRLSQLLVALE 841 (937)
Q Consensus 819 ~a~~aADi--vL~~~~l~~l~~~i~ 841 (937)
..++.||. |..+++=..+.++|+
T Consensus 256 ~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 256 RLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp HHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred HHHHhCCCCEecccCCcchHHHHHH
Confidence 99999983 556666677776665
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.41 E-value=3.1e-07 Score=95.06 Aligned_cols=116 Identities=23% Similarity=0.388 Sum_probs=87.9
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-------------c------ChhhHHHHHHH
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-------------V------KPNEKKRFINE 783 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-------------~------~Pe~K~~iV~~ 783 (937)
-++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..+.+|.. - .+..|-++++.
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 164 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKL 164 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHH
Confidence 3689999999999999999999999999999999999999974223321 1 12367777766
Q ss_pred HhcC-C-CEEEEEcCCcccHHHHHhCCeeEEeCCC--hHHHHhhcCEEEeCCChhHHHHHH
Q 002310 784 LQND-E-NVVAMVGDGINDAAALASSHIGVAMGGG--VGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 784 Lq~~-G-~~VamvGDG~NDa~AL~~AdVGIamg~g--t~~a~~aADivL~~~~l~~l~~~i 840 (937)
+.++ | ..+.||||+.||..|.++|+++|+++.+ .+.....+|.++ +++..+..++
T Consensus 165 ~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (225)
T 1nnl_A 165 LKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVELLGEL 223 (225)
T ss_dssp HHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGGCC--
T ss_pred HHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeee--cCHHHHHHHH
Confidence 5432 3 5799999999999999999998888732 334455689887 4576665443
|
| >1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 | Back alignment and structure |
|---|
Probab=98.40 E-value=4.4e-07 Score=94.06 Aligned_cols=68 Identities=18% Similarity=0.357 Sum_probs=59.8
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
+.+++|.|+ |+|++|+++||++|++++||.+++||+.++++.|.++ .++ +++.++|+++||++.+...
T Consensus 5 ~~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~--------~~I~~aI~~~Gy~a~~~~~ 72 (222)
T 1qup_A 5 TYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAP--------STIINTLRNCGKDAIIRGA 72 (222)
T ss_dssp CEEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCH--------HHHHHHHHHTTCCCEEECC
T ss_pred ceEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEecc---CCH--------HHHHHHHHHcCCccccccC
Confidence 456789999 9999999999999999999999999999999999863 233 7899999999999876544
|
| >1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A | Back alignment and structure |
|---|
Probab=98.35 E-value=7.7e-07 Score=86.21 Aligned_cols=66 Identities=33% Similarity=0.516 Sum_probs=59.0
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (937)
.+..|.|+||+|++|+..||+.|++++||..+++|+.++++.+.|++...+. +.+.+.+++.||.+
T Consensus 6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGT--------AAIQEKIEKLGYHV 71 (151)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCH--------HHHHHHHHHHTCEE
T ss_pred eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCH--------HHHHHHHHHcCCcc
Confidence 4577999999999999999999999999999999999999999998765554 67888899999965
|
| >2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.34 E-value=5.3e-07 Score=92.35 Aligned_cols=68 Identities=25% Similarity=0.323 Sum_probs=59.7
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhc---Ccccc
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSC---GFKSS 200 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~---Gy~~~ 200 (937)
..++.|.|+||+|++|++.||+.|++++||..++||+.++++.|.|++...+. +.+.++++++ ||.+.
T Consensus 19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~~~gg~~v~ 89 (202)
T 2rop_A 19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSP--------VALQRAIEALPPGNFKVS 89 (202)
T ss_dssp -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHTTSSSSCSEEE
T ss_pred cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHhccCCeEEE
Confidence 45678999999999999999999999999999999999999999999876664 7789999998 36553
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.33 E-value=1.2e-06 Score=92.91 Aligned_cols=120 Identities=20% Similarity=0.217 Sum_probs=87.0
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEe-c------cChhhHHHHHHHHhcCC-CEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS-G------VKPNEKKRFINELQNDE-NVV 791 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~a-r------~~Pe~K~~iV~~Lq~~G-~~V 791 (937)
..+.+++.+.++.|++.|+++.++|++.......+.+.+|+.. +.+++ . -.|+--..+.+.+.-.. ..+
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 181 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHM 181 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGE
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCE
Confidence 3567999999999999999999999999988888888877642 12221 1 12333345555555444 679
Q ss_pred EEEcCCcccHHHHHhCC---eeEEeCCC------------------------hHHHHh-hcCEEEeCCChhHHHHHHHHH
Q 002310 792 AMVGDGINDAAALASSH---IGVAMGGG------------------------VGAASE-VASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 792 amvGDG~NDa~AL~~Ad---VGIamg~g------------------------t~~a~~-aADivL~~~~l~~l~~~i~~~ 843 (937)
+|+||+.||..|++.|+ ++|++|.+ .+..++ .||+++ +++..+..++...
T Consensus 182 i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~~~ 259 (267)
T 1swv_A 182 IKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI--ETMQELESVMEHI 259 (267)
T ss_dssp EEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--SSGGGHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceec--cCHHHHHHHHHHH
Confidence 99999999999999999 66777654 233333 489988 5688888777544
Q ss_pred H
Q 002310 844 R 844 (937)
Q Consensus 844 R 844 (937)
.
T Consensus 260 ~ 260 (267)
T 1swv_A 260 E 260 (267)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.33 E-value=7.9e-07 Score=91.62 Aligned_cols=119 Identities=15% Similarity=0.224 Sum_probs=89.8
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeE-eccC------hhhHHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVK------PNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~-ar~~------Pe~K~~iV~~Lq~~G~~Vam 793 (937)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.++ +... |+--..+.+.+.-....+.|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~ 164 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIM 164 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEE
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEE
Confidence 3688999999999999999999999999999999999999852 1222 2222 22223344444444457999
Q ss_pred EcCCcccHHHHHhCCe---eEEeCCChHHH--HhhcCEEEeCCChhHHHHHHHHH
Q 002310 794 VGDGINDAAALASSHI---GVAMGGGVGAA--SEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 794 vGDG~NDa~AL~~AdV---GIamg~gt~~a--~~aADivL~~~~l~~l~~~i~~~ 843 (937)
|||+.||..|++.|++ +|++|.+.... +..||+++ +++..+..++...
T Consensus 165 iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~~ 217 (226)
T 3mc1_A 165 IGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILEL 217 (226)
T ss_dssp EESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHTC
T ss_pred ECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHHH
Confidence 9999999999999999 88888544333 57899988 5688888776643
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.32 E-value=8.3e-07 Score=99.96 Aligned_cols=101 Identities=23% Similarity=0.285 Sum_probs=77.9
Q ss_pred CEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC----CCceeEe-------------c----
Q 002310 713 NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI----PKDKVLS-------------G---- 771 (937)
Q Consensus 713 ~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI----~~~~v~a-------------r---- 771 (937)
+.+.+...-...++|++++.|+.||+.|++|+|+||.....++.+|+++|+ ++++|++ +
T Consensus 210 g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~ 289 (385)
T 4gxt_A 210 GRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKD 289 (385)
T ss_dssp CCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTT
T ss_pred ceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCc
Confidence 344445555567899999999999999999999999999999999999874 4444443 1
Q ss_pred ---cChhhHHHHHHHHhcC--C-CEEEEEcCCcccHHHHHh-CCeeEEe
Q 002310 772 ---VKPNEKKRFINELQND--E-NVVAMVGDGINDAAALAS-SHIGVAM 813 (937)
Q Consensus 772 ---~~Pe~K~~iV~~Lq~~--G-~~VamvGDG~NDa~AL~~-AdVGIam 813 (937)
...+.|.+.|+.+-+. | ..+.++|||.||.+||++ +|.++++
T Consensus 290 ~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 290 FPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp SCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred cceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 2346799999887433 2 347888999999999986 6666555
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.29 E-value=2.7e-06 Score=91.23 Aligned_cols=72 Identities=25% Similarity=0.376 Sum_probs=59.5
Q ss_pred ccChh--hHHHHHHHHhcC----CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 002310 771 GVKPN--EKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 771 r~~Pe--~K~~iV~~Lq~~----G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~ 842 (937)
...|. .|...++.+.+. ...|+++||+.||.+|++.|++||+||++.+..++.||+|+.+++=..+.++|+.
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 34454 777777766543 3469999999999999999999999999999999999999988777778777663
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.29 E-value=4.7e-06 Score=88.36 Aligned_cols=53 Identities=30% Similarity=0.343 Sum_probs=48.3
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 789 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 789 ~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
..|+++||+.||.+|++.|++||+||++.+..++.||.|..+++-..+.++++
T Consensus 200 ~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 200 KDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp GGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred HHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 35899999999999999999999999999999999999998888788887775
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.26 E-value=3.2e-06 Score=88.32 Aligned_cols=133 Identities=21% Similarity=0.187 Sum_probs=99.0
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCce-------eEe--------
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDK-------VLS-------- 770 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~-------v~a-------- 770 (937)
.+++..||+++. -...+.+.+.+++++|++.|++++++||.....+..+.+.+|++... ++.
T Consensus 5 li~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 81 (231)
T 1wr8_A 5 AISIDIDGTITY---PNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLA 81 (231)
T ss_dssp EEEEESTTTTBC---TTSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESC
T ss_pred EEEEECCCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEec
Confidence 566677887654 24467889999999999999999999999999999999988874210 000
Q ss_pred --------------c-------------------c----C---------------------------h--hhHHHHHHHH
Q 002310 771 --------------G-------------------V----K---------------------------P--NEKKRFINEL 784 (937)
Q Consensus 771 --------------r-------------------~----~---------------------------P--e~K~~iV~~L 784 (937)
+ . . | ..|...++.+
T Consensus 82 ~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~ 161 (231)
T 1wr8_A 82 SMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKA 161 (231)
T ss_dssp CCSHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHH
Confidence 0 0 0 1 1344444444
Q ss_pred hcC----CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 785 QND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 785 q~~----G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.++ ...|.|+||+.||.+|++.|+++++|+++.+..++.||+++.+.+=..+.++++
T Consensus 162 ~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 162 SEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp HHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 332 245899999999999999999999999888888889999987766666766664
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.24 E-value=4.8e-06 Score=88.83 Aligned_cols=53 Identities=19% Similarity=0.239 Sum_probs=48.5
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 789 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 789 ~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
..++++||+.||.+|++.|++||+||++.+..++.||.|..+++=..+.++++
T Consensus 217 ~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~ 269 (274)
T 3fzq_A 217 KETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELK 269 (274)
T ss_dssp TTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHH
T ss_pred HHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHH
Confidence 45999999999999999999999999999999999999998887778877765
|
| >1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 | Back alignment and structure |
|---|
Probab=98.23 E-value=1.6e-06 Score=91.21 Aligned_cols=68 Identities=18% Similarity=0.357 Sum_probs=59.3
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
+.+++|.|+ |+|++|+.+||++|++++||.+++||+.++++.|... .++ ++|.++|+++||++.+...
T Consensus 6 ~~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~--------~~I~~aIe~~Gy~a~~~~~ 73 (249)
T 1jk9_B 6 TYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAP--------STIINTLRNCGKDAIIRGA 73 (249)
T ss_dssp CEEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCH--------HHHHHHHHTTTCCCEEEEE
T ss_pred ceeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecC---CCH--------HHHHHHHHHhCCCcccccC
Confidence 456789999 9999999999999999999999999999999999843 233 7899999999999876543
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.18 E-value=1.8e-06 Score=89.13 Aligned_cols=119 Identities=14% Similarity=0.130 Sum_probs=87.0
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-ccC------hhhHHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVK------PNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r~~------Pe~K~~iV~~Lq~~G~~Vam 793 (937)
.++.+++.+.++.|++.|+++.++|+.....+..+.+..|+.. +.+++ ... |+--..+.+.+.-....++|
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~ 169 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLV 169 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEE
Confidence 3567999999999999999999999999999999999999863 22222 221 22223333444333457999
Q ss_pred EcCCcccHHHHHhCCe---eEEeC-CChHHHHhh-cCEEEeCCChhHHHHHHHHH
Q 002310 794 VGDGINDAAALASSHI---GVAMG-GGVGAASEV-ASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 794 vGDG~NDa~AL~~AdV---GIamg-~gt~~a~~a-ADivL~~~~l~~l~~~i~~~ 843 (937)
|||+.||..|++.|++ +|++| ...+..++. +|.++ +++..+..+++..
T Consensus 170 iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~~ 222 (233)
T 3s6j_A 170 IGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDEI 222 (233)
T ss_dssp EESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGGT
T ss_pred EeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHHH
Confidence 9999999999999999 66566 444444443 89887 5788888777643
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.16 E-value=3.9e-06 Score=85.88 Aligned_cols=113 Identities=17% Similarity=0.143 Sum_probs=84.7
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeE-eccC------hhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVK------PNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~-ar~~------Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
.+.+++.+.++.|++.|+++.++|+........+.+.+|+.. +.++ +... |+--..+.+.+.-....+.++
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~i 173 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVAL 173 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEE
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 567899999999999999999999999998999999999852 1232 2222 333344555555445679999
Q ss_pred cCCcccHHHHHhCCeeEEe----CCChHHHHhhcCEEEeCCChhHHHH
Q 002310 795 GDGINDAAALASSHIGVAM----GGGVGAASEVASVVLMGNRLSQLLV 838 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIam----g~gt~~a~~aADivL~~~~l~~l~~ 838 (937)
||+.||.+|++.|++++++ +++.+..++.||.++. ++..+..
T Consensus 174 GD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~--~~~el~~ 219 (226)
T 1te2_A 174 EDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTELTA 219 (226)
T ss_dssp ESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGGCCH
T ss_pred eCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEEC--CHHHHhH
Confidence 9999999999999999999 4444445678998874 4555443
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.15 E-value=5.6e-06 Score=90.27 Aligned_cols=52 Identities=23% Similarity=0.225 Sum_probs=47.6
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.|+++||+.||.+|++.|++||+|+++.+..++.||.|+.+++=..+.++|+
T Consensus 246 e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 246 HLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp GEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred HEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4899999999999999999999999999999999999998777777877776
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.14 E-value=4.8e-06 Score=89.82 Aligned_cols=52 Identities=29% Similarity=0.390 Sum_probs=46.7
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.++++||+.||.+|++.|++||+|+++.+..++.||.++.+++-..+.++++
T Consensus 216 ~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 216 EIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred HEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 5899999999999999999999999888888999999998777777777765
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.13 E-value=2.8e-06 Score=89.23 Aligned_cols=115 Identities=17% Similarity=0.256 Sum_probs=84.6
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-----ccCh--hhHHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-----GVKP--NEKKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-----r~~P--e~K~~iV~~Lq~~G~~Vam 793 (937)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ ...| +--..+++.+.-....++|
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 192 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF 192 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEE
Confidence 3677999999999999999999999999999999999999852 12222 1233 3334455566555567999
Q ss_pred EcCCcccHHHHHhCCeeEE-eCC----ChHHHHhhcCEEEeCCChhHHHHH
Q 002310 794 VGDGINDAAALASSHIGVA-MGG----GVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVGIa-mg~----gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
|||+.||..|++.|++++. +.. +.+..+..+|+++ +++..+..+
T Consensus 193 vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi--~~~~el~~~ 241 (243)
T 2hsz_A 193 VGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKI 241 (243)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGG
T ss_pred EcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEE--CCHHHHHHH
Confidence 9999999999999998844 432 2344566789987 456665443
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.13 E-value=3.1e-06 Score=88.25 Aligned_cols=116 Identities=17% Similarity=0.214 Sum_probs=85.6
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeE-eccCh--hhHH----HHHHHHhcC-CCEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKP--NEKK----RFINELQND-ENVVA 792 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~-ar~~P--e~K~----~iV~~Lq~~-G~~Va 792 (937)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.++ +...+ ..|. .+.+.+.-. ...+.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i 188 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVI 188 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEE
Confidence 3578999999999999999999999999999999999999852 1222 22222 1233 344444444 56799
Q ss_pred EEcCCcccHHHHHhCCe---eEEeCCChHH--HHhhcCEEEeCCChhHHHHHH
Q 002310 793 MVGDGINDAAALASSHI---GVAMGGGVGA--ASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdV---GIamg~gt~~--a~~aADivL~~~~l~~l~~~i 840 (937)
+|||+.||..|++.|++ +|++|.+... .+..+|.++. ++..+.+++
T Consensus 189 ~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 189 MVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred EECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 99999999999999999 6666644433 3477999884 577776654
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.11 E-value=7.8e-06 Score=84.53 Aligned_cols=104 Identities=13% Similarity=0.070 Sum_probs=73.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--cee-EeccChhhH------HHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKV-LSGVKPNEK------KRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v-~ar~~Pe~K------~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+.. +.+ .+...+..| ..+.+.+.-....+.||
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~v 169 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAI 169 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEE
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEE
Confidence 3789999999999999999999998754 778888999853 122 222222333 45566665555679999
Q ss_pred cCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeC
Q 002310 795 GDGINDAAALASSHIGVAMGGGVGAASEVASVVLMG 830 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~ 830 (937)
||+.||..|.+.|+++++|.+..+..+ .||+++.+
T Consensus 170 GDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s 204 (233)
T 3nas_A 170 EDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQ 204 (233)
T ss_dssp ECSHHHHHHHHHTTCEEEECC--------CSEECSS
T ss_pred eCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCC
Confidence 999999999999999999986555544 79998853
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.11 E-value=7.6e-06 Score=84.62 Aligned_cols=114 Identities=13% Similarity=0.167 Sum_probs=83.5
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--cee-EeccC------hhhHHHHHHHHhcCCC-EEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKV-LSGVK------PNEKKRFINELQNDEN-VVA 792 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v-~ar~~------Pe~K~~iV~~Lq~~G~-~Va 792 (937)
-.+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+ .+... |+--..+.+.+.-... .+.
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v 181 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVF 181 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEE
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEE
Confidence 3578999999999999999999999999999999999999852 222 22222 2333455566655555 799
Q ss_pred EEcCCcccHHHHHhCCe-eEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 793 MVGDGINDAAALASSHI-GVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdV-GIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
||||+.||..|.++|++ +|.++.+.+ ..+|.++ +++..+..++.
T Consensus 182 ~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 182 FIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp EEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 99999999999999997 777775544 3567666 46887777654
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.11 E-value=5.6e-06 Score=86.58 Aligned_cols=116 Identities=21% Similarity=0.273 Sum_probs=87.0
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC-CceeEec-------------cCh----------hhHH
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP-KDKVLSG-------------VKP----------NEKK 778 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~-~~~v~ar-------------~~P----------e~K~ 778 (937)
-++.|++.+.++.|+++|+++.++|+.....+..+.+ |+. .+.+++. -.| .+|.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K~ 153 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKP 153 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHH
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCCCeEEeeeeEEcCCceEEecCCCCccccccccCCcHH
Confidence 4789999999999999999999999999998888888 762 1233321 122 2477
Q ss_pred HHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhh--cCEEEeCCChhHHHHHHHH
Q 002310 779 RFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV--ASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 779 ~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~a--ADivL~~~~l~~l~~~i~~ 842 (937)
.+++.+......+.||||+.||..+.++|++.++..+..+...+. +|+++ +++..+..++..
T Consensus 154 ~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 154 SVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp HHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred HHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 899998877789999999999999999999988753212222222 56655 578888776653
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.10 E-value=9.5e-06 Score=80.77 Aligned_cols=114 Identities=17% Similarity=0.186 Sum_probs=82.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcC--CCCceeE-e-----c----cChh-
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVG--IPKDKVL-S-----G----VKPN- 775 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~---------------~tA~~iA~~~G--I~~~~v~-a-----r----~~Pe- 775 (937)
++.|++.++++.|++.|+++.++|+... ..+..+.+++| ++ .++ + . ..|.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~~~~~~~KP~~ 104 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVD--AIFMCPHGPDDGCACRKPLP 104 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCC--EEEEECCCTTSCCSSSTTSS
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCcee--EEEEcCCCCCCCCCCCCCCH
Confidence 5789999999999999999999999886 56677888899 64 444 2 1 1222
Q ss_pred -hHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCe---eEEeCCChHHHH----hhcCEEEeCCChhHHHHHHH
Q 002310 776 -EKKRFINELQNDENVVAMVGDGINDAAALASSHI---GVAMGGGVGAAS----EVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 776 -~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdV---GIamg~gt~~a~----~aADivL~~~~l~~l~~~i~ 841 (937)
-=..+.+.+.-....+.||||+.||..+.++|++ +|..|.+..... ..+|.++ +++..+...+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~--~~l~el~~~l~ 176 (179)
T 3l8h_A 105 GMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC--EDLAAVAEQLL 176 (179)
T ss_dssp HHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--cCHHHHHHHHH
Confidence 2234555555555679999999999999999995 666665544443 4578887 46887776653
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.09 E-value=3.5e-06 Score=84.71 Aligned_cols=110 Identities=15% Similarity=0.212 Sum_probs=82.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeEe-cc----C--hhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS-GV----K--PNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~a-r~----~--Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
.+.+++.+.++.|++.|+++.++|++...... ..+.+|+... .+++ .. . |+--..+.+.++-....++++
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~i 163 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYI 163 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEEE
Confidence 46899999999999999999999999988888 8888898531 2222 11 2 333345555555455679999
Q ss_pred cCCcccHHHHHhCCee-EEeCCChHHHHhhcCEEEeCCChhHHHHHH
Q 002310 795 GDGINDAAALASSHIG-VAMGGGVGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 795 GDG~NDa~AL~~AdVG-Iamg~gt~~a~~aADivL~~~~l~~l~~~i 840 (937)
||+.||.+|++.|+++ |+|+++. . .+|.++ +++..+..++
T Consensus 164 GD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~--~~~~el~~~l 204 (207)
T 2go7_A 164 GDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRI--QALADISRIF 204 (207)
T ss_dssp ESSHHHHHHHHHHTCEEEESSCCS-C---TTEEEC--SSTTHHHHHT
T ss_pred CCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEe--CCHHHHHHHH
Confidence 9999999999999997 8888665 2 688876 4566665543
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.09 E-value=3.3e-06 Score=86.43 Aligned_cols=115 Identities=17% Similarity=0.130 Sum_probs=79.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-cc----Ch--hhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV----KP--NEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r~----~P--e~K~~iV~~Lq~~G~~Vamv 794 (937)
.+.+++.+.++.|++.|+++.++|+........+.+.+|+.. +.+++ .. .| +--..+.+.+.-....+.++
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~i 168 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYI 168 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEE
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEE
Confidence 346899999999999999999999999999999999999853 12322 22 22 21233333333334568999
Q ss_pred cCCcccHHHHHhCCeeEEe----CCChHHHHhh-cCEEEeCCChhHHHHHH
Q 002310 795 GDGINDAAALASSHIGVAM----GGGVGAASEV-ASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIam----g~gt~~a~~a-ADivL~~~~l~~l~~~i 840 (937)
||+.||.+|++.|++++++ ++..+..++. ||.++. ++..+...+
T Consensus 169 GD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 217 (225)
T 3d6j_A 169 GDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIS--TLGQLISVP 217 (225)
T ss_dssp ESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEES--SGGGGC---
T ss_pred cCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEEC--CHHHHHHhh
Confidence 9999999999999998877 3333333343 898874 566555554
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.07 E-value=5.5e-06 Score=85.64 Aligned_cols=116 Identities=16% Similarity=0.228 Sum_probs=86.9
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-------cChhhHHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-------~~Pe~K~~iV~~Lq~~G~~Vam 793 (937)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++. -.|+-...+++.+.-....++|
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 161 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALI 161 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEE
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEE
Confidence 4578999999999999999999999999999999999999852 233332 1244445566666555567999
Q ss_pred EcCCcccHHHHHhCCee-EEeCCC--hHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 794 VGDGINDAAALASSHIG-VAMGGG--VGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVG-Iamg~g--t~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
|||+.||..|.+.|++. |++..| .... ..+|.++ +++..+..++.
T Consensus 162 vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~ 209 (222)
T 2nyv_A 162 VGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMD 209 (222)
T ss_dssp EESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHH
T ss_pred ECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHH
Confidence 99999999999999988 666432 2111 5688877 46777776654
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.04 E-value=7.4e-06 Score=83.68 Aligned_cols=104 Identities=12% Similarity=0.084 Sum_probs=77.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-c----cCh--hhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G----VKP--NEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r----~~P--e~K~~iV~~Lq~~G~~Vamv 794 (937)
.+.+++.+.++.|++.|+++.++|++ .....+.+.+|+.. +.+++ . ..| +--..+.+.+.-....+.++
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~i 168 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGL 168 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEEE
Confidence 57899999999999999999999998 44567778888742 12221 1 122 23334444444344579999
Q ss_pred cCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeC
Q 002310 795 GDGINDAAALASSHIGVAMGGGVGAASEVASVVLMG 830 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~ 830 (937)
||+.||..|++.|+++++|.++.+..+ .||.++.+
T Consensus 169 GD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~ 203 (221)
T 2wf7_A 169 EDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPD 203 (221)
T ss_dssp ESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESS
T ss_pred eCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcC
Confidence 999999999999999999987776666 89998854
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.04 E-value=1.1e-05 Score=83.16 Aligned_cols=116 Identities=15% Similarity=0.159 Sum_probs=79.3
Q ss_pred cCChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCCc---eeEeccC---hhhHHHHH----HHHh--cCCCE
Q 002310 724 RIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYVASLVGIPKD---KVLSGVK---PNEKKRFI----NELQ--NDENV 790 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~a-GI~v~mlTGD~~~tA~~iA~~~GI~~~---~v~ar~~---Pe~K~~iV----~~Lq--~~G~~ 790 (937)
.+.|++.+.++.|++. |+++.++|+.....+..+.+.+|+... .+++.-. |+-+..++ +.+. -....
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~ 172 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQ 172 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGG
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCccc
Confidence 4679999999999999 999999999999999999999998531 1222211 22223333 3333 23357
Q ss_pred EEEEcCCcccHHHHHhCC---eeEEeCCChHHHHh--hcCEEEeCCChhHHHHHHH
Q 002310 791 VAMVGDGINDAAALASSH---IGVAMGGGVGAASE--VASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 791 VamvGDG~NDa~AL~~Ad---VGIamg~gt~~a~~--aADivL~~~~l~~l~~~i~ 841 (937)
+.|+||+.||..|++.|+ |+|+.+........ .+|.++. ++..+..+++
T Consensus 173 ~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~--~~~el~~~l~ 226 (234)
T 2hcf_A 173 IVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 226 (234)
T ss_dssp EEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeC--CHHhHHHHHH
Confidence 999999999999999999 45555533333332 3898874 4555555543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.03 E-value=5.9e-06 Score=85.36 Aligned_cols=118 Identities=17% Similarity=0.116 Sum_probs=90.3
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cC--hhhHHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VK--PNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~--Pe~K~~iV~~Lq~~G~~Vam 793 (937)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++. .. |+--..+.+.+.-....+.|
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 177 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILF 177 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEE
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEE
Confidence 3577999999999999999999999999999999999999852 122221 12 22334455555544567999
Q ss_pred EcCCcccHHHHHhCCeeEEe----CCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 002310 794 VGDGINDAAALASSHIGVAM----GGGVGAASEVASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVGIam----g~gt~~a~~aADivL~~~~l~~l~~~i~~ 842 (937)
|||+.||..|.+.|++++++ +...+..+..+|.++ +++..+..++..
T Consensus 178 vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 178 VSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp EESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred EeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 99999999999999999999 444444456789888 578888887764
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.02 E-value=5.3e-06 Score=89.62 Aligned_cols=118 Identities=13% Similarity=0.126 Sum_probs=89.8
Q ss_pred cCChhHHHHHHHHHhC-CCeEEEEcCC---------------------CHHHHHHHHHHcCCCCce-------------e
Q 002310 724 RIRDDAAHVVNSLSSQ-GIGVYMLSGD---------------------KKNSAEYVASLVGIPKDK-------------V 768 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~a-GI~v~mlTGD---------------------~~~tA~~iA~~~GI~~~~-------------v 768 (937)
..++++.++++.|++. |+++.+.|.. ....+..+.++.|+.... .
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 201 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY 201 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence 4678899999999887 9998888866 455667777888874111 2
Q ss_pred EeccCh--hhHHHHHHHHhcC----CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 769 LSGVKP--NEKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 769 ~ar~~P--e~K~~iV~~Lq~~----G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+....| ..|...++.+.++ ...++|+||+.||.+|++.|+++++|+++.+..++.||.++.+++-..+.++++
T Consensus 202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLITDSEYSKGITNTLK 280 (289)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCBCSSCHHHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEEcCCCCcCHHHHHHH
Confidence 233333 3566666655442 346999999999999999999999999999999999999988777777777665
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.01 E-value=1.2e-05 Score=84.95 Aligned_cols=118 Identities=14% Similarity=0.101 Sum_probs=86.1
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ce-eE-eccCh-hhH------HHHHHHHhcCCCEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DK-VL-SGVKP-NEK------KRFINELQNDENVV 791 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~-v~-ar~~P-e~K------~~iV~~Lq~~G~~V 791 (937)
-.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +. ++ +...+ ..| ..+.+.+.-....+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 188 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERC 188 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHE
Confidence 4567899999999999999999999999999999999999841 12 33 22222 222 33444444344679
Q ss_pred EEEcCCcccHHHHHhCCee-EEeCCC-------h-HHHHhhcCEEEeCCChhHHHHHHHH
Q 002310 792 AMVGDGINDAAALASSHIG-VAMGGG-------V-GAASEVASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVG-Iamg~g-------t-~~a~~aADivL~~~~l~~l~~~i~~ 842 (937)
.||||+.||..|.+.|+++ |.+..| . +.....+|+++ +++..+..+++.
T Consensus 189 i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 189 VVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 9999999999999999998 555433 2 23334589888 578888887764
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.00 E-value=1.4e-05 Score=84.69 Aligned_cols=117 Identities=16% Similarity=0.088 Sum_probs=85.7
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEe-ccC------hhhHHHHHHHHhcCC-CEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS-GVK------PNEKKRFINELQNDE-NVVA 792 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~a-r~~------Pe~K~~iV~~Lq~~G-~~Va 792 (937)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ ... |+--..+.+.+.-.. ..+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i 190 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGCI 190 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEE
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccEE
Confidence 678999999999999999999999999999999988888642 22222 111 222244555555555 7799
Q ss_pred EEcCCcccHHHHHhCC---eeEEeCCC------------------------hHHHH-hhcCEEEeCCChhHHHHHHHH
Q 002310 793 MVGDGINDAAALASSH---IGVAMGGG------------------------VGAAS-EVASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 793 mvGDG~NDa~AL~~Ad---VGIamg~g------------------------t~~a~-~aADivL~~~~l~~l~~~i~~ 842 (937)
||||+.||..|.+.|+ |+|++|.+ .+..+ ..+|+++ +++..++.+++.
T Consensus 191 ~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~~ 266 (277)
T 3iru_A 191 KVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVI--DSVADLETVITD 266 (277)
T ss_dssp EEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEE--SSGGGTHHHHHH
T ss_pred EEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEe--cCHHHHHHHHHH
Confidence 9999999999999999 56666632 22333 3489988 568888877754
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.99 E-value=2.3e-05 Score=80.76 Aligned_cols=115 Identities=16% Similarity=0.218 Sum_probs=88.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cCh--hhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~P--e~K~~iV~~Lq~~G~~Vamv 794 (937)
.+.|++.+.++.|++. +++.++|+........+.+.+|+.. +.+++. ..| +--..+.+.+.-....+.||
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v 178 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV 178 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEEEE
Confidence 5679999999999999 9999999999999999999999852 122221 222 22344555555445679999
Q ss_pred cCCc-ccHHHHHhCC---eeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 795 GDGI-NDAAALASSH---IGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 795 GDG~-NDa~AL~~Ad---VGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
||+. ||..|.+.|+ +++++|+..+..++.+|+++ +++..+..+++
T Consensus 179 GD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 179 GDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp ESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred cCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee--CCHHHHHHHHH
Confidence 9997 9999999999 67777766666667899988 46887777664
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.98 E-value=8.3e-06 Score=83.96 Aligned_cols=116 Identities=18% Similarity=0.196 Sum_probs=86.9
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-cc----C--hhhHHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV----K--PNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r~----~--Pe~K~~iV~~Lq~~G~~Vam 793 (937)
-++.|++.+.++.|++.|+++.++|+........+.+.+|+.. +.+++ .. . |+--..+.+.+.-....+.|
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 174 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILF 174 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEEE
Confidence 4678999999999999999999999999999999999999852 12322 22 1 23333445555444567999
Q ss_pred EcCCcccHHHHHhCCeeEEe----CCChHHHHhhcCEEEeCCChhHHHHHH
Q 002310 794 VGDGINDAAALASSHIGVAM----GGGVGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVGIam----g~gt~~a~~aADivL~~~~l~~l~~~i 840 (937)
|||+.||..|.++|++++++ ++..+..+..+|+++ +++..+..++
T Consensus 175 iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (230)
T 3um9_A 175 VSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVV--SDVGVLASRF 223 (230)
T ss_dssp EESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEE--SSHHHHHHTC
T ss_pred EeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEe--CCHHHHHHHH
Confidence 99999999999999999999 333344456789887 4677776554
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=3.7e-05 Score=79.03 Aligned_cols=116 Identities=21% Similarity=0.279 Sum_probs=82.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHcCCCCceeE-ec----------------
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDK---------------KNSAEYVASLVGIPKDKVL-SG---------------- 771 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~---------------~~tA~~iA~~~GI~~~~v~-ar---------------- 771 (937)
++.|++.++++.|+++|+++.++|+.. ...+..+.+++|+.-+.++ +.
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~~~~~~~~~~~~~~~~~~~~~~~ 129 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDC 129 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSS
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceEEEEECCcCCCCcccccCccCcC
Confidence 678999999999999999999999998 4677888889998522333 21
Q ss_pred c--ChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCee--EEe--CCC-hHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 772 V--KPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIG--VAM--GGG-VGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 772 ~--~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVG--Iam--g~g-t~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
- .|+--..+.+.+.-....+.||||..||..+.++|++. |.+ |.. .+.....+|.++ +++..+..++.
T Consensus 130 ~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~el~~~l~ 204 (211)
T 2gmw_A 130 RKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADLPQAIK 204 (211)
T ss_dssp STTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHHHHHHHH
Confidence 1 23333344555544456789999999999999999964 444 322 233334589887 46888777654
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.96 E-value=7.9e-06 Score=82.68 Aligned_cols=113 Identities=22% Similarity=0.202 Sum_probs=84.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-cc----C--hhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV----K--PNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r~----~--Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|+........+.+.+|+.. +.+++ .. . |+--..+.+.+.-....+.+|
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~i 168 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALII 168 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEEE
Confidence 578999999999999999999999999999999999999852 12322 21 2 333345555665555679999
Q ss_pred cCCcccHHHHHhCCeeEEeC-C-ChHHHHhhcCEEEeCCChhHHHH
Q 002310 795 GDGINDAAALASSHIGVAMG-G-GVGAASEVASVVLMGNRLSQLLV 838 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIamg-~-gt~~a~~aADivL~~~~l~~l~~ 838 (937)
||+.||..|.+.|++++.+. . +....+..+|.++ +++..+..
T Consensus 169 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~--~~~~el~~ 212 (214)
T 3e58_A 169 EDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLL--DSLTDVLD 212 (214)
T ss_dssp ECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEE--SSGGGGGG
T ss_pred eccHhhHHHHHHCCCEEEEECCCCccchhccHHHHH--HHHHHHHh
Confidence 99999999999999988885 2 2333446789887 35665543
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.94 E-value=2.2e-05 Score=81.65 Aligned_cols=116 Identities=14% Similarity=0.131 Sum_probs=79.8
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC----ceeEe-c----c--ChhhHHHHHHHHhcCCCEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK----DKVLS-G----V--KPNEKKRFINELQNDENVV 791 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~----~~v~a-r----~--~Pe~K~~iV~~Lq~~G~~V 791 (937)
.++.|++.+.++.|++.|+++.++|+..........+. |+.. +.+++ . - .|+--..+.+.+.-....+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~ 185 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEA 185 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhhe
Confidence 46789999999999999999999999988877777777 8752 12222 1 1 2223344555555455679
Q ss_pred EEEcCCcccHHHHHhCCee-EEeCCCh--H--HHHhhcCEEEeCCChhHHHHHHH
Q 002310 792 AMVGDGINDAAALASSHIG-VAMGGGV--G--AASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVG-Iamg~gt--~--~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.||||+.||..|.+.|++. |.+..|. . ..+..+|+++ +++..+..+++
T Consensus 186 i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 238 (247)
T 3dv9_A 186 LVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF--HSMPDFNKNWE 238 (247)
T ss_dssp EEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE--SSHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 9999999999999999975 4444332 2 2224799988 46777776655
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.92 E-value=2.2e-05 Score=80.81 Aligned_cols=116 Identities=12% Similarity=0.169 Sum_probs=82.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCCC--ceeEec-----cCh--hhHHHHHHHHhcCCCEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDK---KNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVV 791 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~---~~tA~~iA~~~GI~~--~~v~ar-----~~P--e~K~~iV~~Lq~~G~~V 791 (937)
.+.+++.+.++.|++.|+++.++|+.. ......+.+.+|+.. +.+++. ..| +--..+.+.+.-....+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 178 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEES 178 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGE
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccce
Confidence 458999999999999999999999999 888888999999852 122221 223 22223333333334579
Q ss_pred EEEcCCc-ccHHHHHhCCeeEEe---CCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 792 AMVGDGI-NDAAALASSHIGVAM---GGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 792 amvGDG~-NDa~AL~~AdVGIam---g~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+++||+. ||..|++.|++++++ ++..+..++.+|.++ +++..+..+++
T Consensus 179 ~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 179 LHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp EEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred EEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHHH
Confidence 9999999 999999999999999 322222234577766 56777776653
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.92 E-value=2.1e-05 Score=82.16 Aligned_cols=116 Identities=11% Similarity=0.092 Sum_probs=81.4
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC----ceeEec-----c--ChhhHHHHHHHHhcCCCEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK----DKVLSG-----V--KPNEKKRFINELQNDENVV 791 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~----~~v~ar-----~--~Pe~K~~iV~~Lq~~G~~V 791 (937)
.++.+++.+.++.|++.|+++.++|+.....+....+. |+.. +.+++. - .|+--..+.+.+.-....+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~ 186 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEA 186 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHe
Confidence 36789999999999999999999999887777777777 8752 222221 1 2222333444444344679
Q ss_pred EEEcCCcccHHHHHhCCee-EEeCCChH----HHHhhcCEEEeCCChhHHHHHHH
Q 002310 792 AMVGDGINDAAALASSHIG-VAMGGGVG----AASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVG-Iamg~gt~----~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.||||+.||..|.+.|++. |.+..|.. ..+..+|+++ +++..+..+++
T Consensus 187 i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 187 VVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp EEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 9999999999999999984 45544332 2234699887 56888877654
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=9.3e-06 Score=87.10 Aligned_cols=116 Identities=11% Similarity=0.096 Sum_probs=83.9
Q ss_pred CcCChhHHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHcCCCC--ceeE-ecc------ChhhHH----HHHHHHhcC
Q 002310 723 DRIRDDAAHVVNSLSSQGI--GVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGV------KPNEKK----RFINELQND 787 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI--~v~mlTGD~~~tA~~iA~~~GI~~--~~v~-ar~------~Pe~K~----~iV~~Lq~~ 787 (937)
-++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+.. +.++ +.. .+.-|. .+.+.+.-.
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~ 220 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLA 220 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTCC
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCCC
Confidence 3578999999999999999 999999999999999999999853 1222 111 122233 344444444
Q ss_pred C-CEEEEEcCCcccHHHHHhCCeeEEeCCChHHH------HhhcCEEEeCCChhHHHHHH
Q 002310 788 E-NVVAMVGDGINDAAALASSHIGVAMGGGVGAA------SEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 788 G-~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a------~~aADivL~~~~l~~l~~~i 840 (937)
. ..+.||||+.||..|.++|++|.+|+...+.. ...+|+++ +++..++.++
T Consensus 221 ~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi--~sl~el~~~l 278 (282)
T 3nuq_A 221 RYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI--SDILELPHVV 278 (282)
T ss_dssp CGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEE--SSGGGGGGTS
T ss_pred CcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEe--CCHHHHHHHh
Confidence 4 67999999999999999999998886222111 23688887 4677666543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.90 E-value=5.6e-05 Score=78.73 Aligned_cols=116 Identities=18% Similarity=0.190 Sum_probs=83.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-cc----Ch--hhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV----KP--NEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r~----~P--e~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ .. .| +-=..+.+.+.-....+.||
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~i 173 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMV 173 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 478999999999999999999999999999999999999853 22332 21 22 22233444444445579999
Q ss_pred cCCc-ccHHHHHhCCeeEEe---CCChHHHHh---hcCEEEeCCChhHHHHHHH
Q 002310 795 GDGI-NDAAALASSHIGVAM---GGGVGAASE---VASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 795 GDG~-NDa~AL~~AdVGIam---g~gt~~a~~---aADivL~~~~l~~l~~~i~ 841 (937)
||+. ||..|.+.|+++... |.+...... .+|.++ +++..+...+.
T Consensus 174 GD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 225 (241)
T 2hoq_A 174 GDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVLA 225 (241)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHHH
T ss_pred CCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHHH
Confidence 9998 999999999997655 333333332 689887 46777776653
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.85 E-value=1.7e-05 Score=81.98 Aligned_cols=115 Identities=15% Similarity=0.136 Sum_probs=84.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-c----c--ChhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G----V--KPNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r----~--~Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ . . .|+--..+.+.+.-....+.||
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i 174 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFV 174 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEEE
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 578999999999999999999999999999999999999842 12322 1 1 2223344555554445578999
Q ss_pred cCCcccHHHHHhCCeeEEeC----CChHHHHhhcCEEEeCCChhHHHHHH
Q 002310 795 GDGINDAAALASSHIGVAMG----GGVGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIamg----~gt~~a~~aADivL~~~~l~~l~~~i 840 (937)
||+.||..|.+.|++++.+- ...+..+..+|.++ +++..+..++
T Consensus 175 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 222 (232)
T 1zrn_A 175 ASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELF 222 (232)
T ss_dssp ESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC
T ss_pred eCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 99999999999999998882 22222345688887 4577766554
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=2.8e-05 Score=80.94 Aligned_cols=115 Identities=21% Similarity=0.167 Sum_probs=82.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-cc------ChhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r~------~Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ .. .|+--..+.+.+.-....+.||
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i 184 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFV 184 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 678999999999999999999999999999999999999852 12332 21 2223344455554445678999
Q ss_pred cCCcccHHHHHhCCeeEEe---CCChHHHHhhc-CEEEeCCChhHHHHHH
Q 002310 795 GDGINDAAALASSHIGVAM---GGGVGAASEVA-SVVLMGNRLSQLLVAL 840 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIam---g~gt~~a~~aA-DivL~~~~l~~l~~~i 840 (937)
||+.||..+.+.|++.... +...+.....+ |.++ +++..+..++
T Consensus 185 GD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 185 SSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp ESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred eCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceee--CCHHHHHHHH
Confidence 9999999999999965443 43322223456 8877 4677776654
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.80 E-value=5.8e-06 Score=84.15 Aligned_cols=111 Identities=9% Similarity=0.168 Sum_probs=80.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeE-eccChhhH------HHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVL-SGVKPNEK------KRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~-ar~~Pe~K------~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+... .++ +......| ..+.+.+.-....+.||
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~v 161 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFI 161 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEE
Confidence 5689999999999999 99999999999999999999998521 222 22111233 44555554445679999
Q ss_pred cCCcccHHHHHhCCeeEEeC---C-ChHHHHhhcCEEEeCCChhHHHH
Q 002310 795 GDGINDAAALASSHIGVAMG---G-GVGAASEVASVVLMGNRLSQLLV 838 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIamg---~-gt~~a~~aADivL~~~~l~~l~~ 838 (937)
||+.||..|.+.|++++++. . ..+..++ +|.++. ++..+..
T Consensus 162 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~~ 206 (209)
T 2hdo_A 162 GDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDILE 206 (209)
T ss_dssp ESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGGG
T ss_pred CCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHHH
Confidence 99999999999999999973 2 2333334 898873 4555543
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.78 E-value=6.1e-05 Score=78.64 Aligned_cols=115 Identities=14% Similarity=0.125 Sum_probs=80.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC-CceeEe-ccChh--hH----HHHHHHHhcCCCEEEEEc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP-KDKVLS-GVKPN--EK----KRFINELQNDENVVAMVG 795 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~-~~~v~a-r~~Pe--~K----~~iV~~Lq~~G~~VamvG 795 (937)
++.|++.+.++.|++.|+++.++|+.....+..+-+.+|+. -+.+++ ...+. -| ..+.+.+.-....+.|||
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vG 189 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIG 189 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTTTCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEE
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCcceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEc
Confidence 46689999999999999999999999988888899999874 123333 22111 12 334444443446799999
Q ss_pred CCcccHHHHHhCCee---EEeCCCh-H-HHHhhcCEEEeCCChhHHHHHH
Q 002310 796 DGINDAAALASSHIG---VAMGGGV-G-AASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 796 DG~NDa~AL~~AdVG---Iamg~gt-~-~a~~aADivL~~~~l~~l~~~i 840 (937)
|+.||..|.++|++. |++|.+. + .....+|.++ +++..+...+
T Consensus 190 Ds~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 190 DSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp SSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred CCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 999999999999994 3344322 2 2233688877 4577766544
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.77 E-value=2.3e-05 Score=83.44 Aligned_cols=67 Identities=30% Similarity=0.314 Sum_probs=57.7
Q ss_pred hhHHHHHHHHhcC-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 775 NEKKRFINELQND-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 775 e~K~~iV~~Lq~~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
-.|..-++.+.++ | ..|+++||+.||.+|++.|++||+|+++.+..++.||.|..+++=..+.++++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 263 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALK 263 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHH
Confidence 4687777776543 3 46999999999999999999999999999999999999999888888887775
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00011 Score=75.34 Aligned_cols=112 Identities=15% Similarity=0.252 Sum_probs=79.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEe-cc------Ch--hhHHHHHHHHhcCCCEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS-GV------KP--NEKKRFINELQNDENVV 791 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~a-r~------~P--e~K~~iV~~Lq~~G~~V 791 (937)
++.+++.+.++.|+. ++.++|+........+.+++|+.. +.+++ .. .| +--..+.+.+.-....+
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~ 163 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRV 163 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHe
Confidence 567888888888874 999999999999999999999852 23332 11 12 12233444444444679
Q ss_pred EEEcCCcccHHHHHhCCee-EEeCCChH-------HHHhh-cCEEEeCCChhHHHHHH
Q 002310 792 AMVGDGINDAAALASSHIG-VAMGGGVG-------AASEV-ASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVG-Iamg~gt~-------~a~~a-ADivL~~~~l~~l~~~i 840 (937)
.++||+.||..|++.|+++ |+++.+.. ..++. ||+++ +++..+...+
T Consensus 164 i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l 219 (229)
T 2fdr_A 164 VVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVI 219 (229)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHH
T ss_pred EEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceee--cCHHHHHHHH
Confidence 9999999999999999998 77765443 24555 99887 4577776654
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.70 E-value=5.6e-05 Score=75.95 Aligned_cols=87 Identities=13% Similarity=0.140 Sum_probs=67.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCCceeEec--cChhhHHHHH----HHHhcCCCEEEEEcC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDK-KNSAEYVASLVGIPKDKVLSG--VKPNEKKRFI----NELQNDENVVAMVGD 796 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~-~~tA~~iA~~~GI~~~~v~ar--~~Pe~K~~iV----~~Lq~~G~~VamvGD 796 (937)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+.. .|.. ..+..|.+.+ +.+.-....+.||||
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~--~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD 145 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR--YFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDD 145 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT--TEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEES
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh--hcceeEEEeCchHHHHHHHHHHcCCChHHEEEEeC
Confidence 578999999999999999999999998 799999999999963 3322 1233454333 333333456899999
Q ss_pred CcccHHHHHhCCeeEE
Q 002310 797 GINDAAALASSHIGVA 812 (937)
Q Consensus 797 G~NDa~AL~~AdVGIa 812 (937)
+.||..+.++|++...
T Consensus 146 ~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 146 ERRNIVDVSKLGVTCI 161 (187)
T ss_dssp CHHHHHHHHTTTCEEE
T ss_pred CccChHHHHHcCCEEE
Confidence 9999999999987543
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.69 E-value=6.4e-05 Score=75.94 Aligned_cols=111 Identities=17% Similarity=0.238 Sum_probs=81.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cC--hhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VK--PNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~--Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+.. +.+++. .. |+--..+.+.+. ...+.||
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~v 149 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFLV 149 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCEEE
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEEEE
Confidence 57799999 9999999 9999999999999999999999852 233321 12 333344555555 4678999
Q ss_pred cCCcccHHHHHhCCeeEEe----CCChHHHHhhcCEEEeCCChhHHHHHH
Q 002310 795 GDGINDAAALASSHIGVAM----GGGVGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIam----g~gt~~a~~aADivL~~~~l~~l~~~i 840 (937)
||+.||..|.+.|++...+ +...+.....+|.++ +++..+..++
T Consensus 150 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 197 (201)
T 2w43_A 150 SSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIV--NDFKELYEWI 197 (201)
T ss_dssp ESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEE--SSHHHHHHHH
T ss_pred eCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 9999999999999999777 222222234588876 4577776654
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00014 Score=73.27 Aligned_cols=123 Identities=20% Similarity=0.152 Sum_probs=90.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCCC--ceeEecc---------C--hhhHHHHHHHHhcC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKK---NSAEYVASLVGIPK--DKVLSGV---------K--PNEKKRFINELQND 787 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~---~tA~~iA~~~GI~~--~~v~ar~---------~--Pe~K~~iV~~Lq~~ 787 (937)
++.|++.++++.|+++|+++.++|+-.. ..+..+.+.+|+.. +.+++.- . |+--..+.+.+.-.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 113 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQID 113 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCC
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCC
Confidence 5889999999999999999999998766 88899999999853 1233221 2 33334555566555
Q ss_pred CCEEEEEcCC-cccHHHHHhCCeeEEe-CCChH-----H-HHhhcCEEEeCCChhHHHHHHHHHHHH
Q 002310 788 ENVVAMVGDG-INDAAALASSHIGVAM-GGGVG-----A-ASEVASVVLMGNRLSQLLVALELSRLT 846 (937)
Q Consensus 788 G~~VamvGDG-~NDa~AL~~AdVGIam-g~gt~-----~-a~~aADivL~~~~l~~l~~~i~~~R~~ 846 (937)
...+.||||. .+|..+-++|++.... ..+.. . ....+|.++-..++..+..++++.++-
T Consensus 114 ~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~~~ 180 (189)
T 3ib6_A 114 KTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLKKI 180 (189)
T ss_dssp GGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHHHH
T ss_pred cccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHHHh
Confidence 5689999999 7999999999987544 22221 1 112678888766899999998886653
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.69 E-value=7.3e-05 Score=78.13 Aligned_cols=115 Identities=19% Similarity=0.118 Sum_probs=84.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-----c--ChhhHHHHHHHHhcCCCEEEEEcC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----V--KPNEKKRFINELQNDENVVAMVGD 796 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-----~--~Pe~K~~iV~~Lq~~G~~VamvGD 796 (937)
++.+++.+.++.|++. +++.++|+........+.+.+|+.-+.+++. . .|+--..+.+.+.-....|+||||
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD 198 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPWDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAA 198 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCCSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCcceEEeecccccCCCCHHHHHHHHHHcCCChHHEEEEcC
Confidence 4678999999999985 9999999999999999999999853333322 1 222223344444434467999999
Q ss_pred CcccHHHHHhCCeeEEeCC-----Ch---HH--HHhhcCEEEeCCChhHHHHHHH
Q 002310 797 GINDAAALASSHIGVAMGG-----GV---GA--ASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 797 G~NDa~AL~~AdVGIamg~-----gt---~~--a~~aADivL~~~~l~~l~~~i~ 841 (937)
+.||..|.+.|+++++|.. |. +. .+..+|+++ +++..+..++.
T Consensus 199 ~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~ 251 (254)
T 3umc_A 199 HNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA 251 (254)
T ss_dssp CHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred chHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence 9999999999999999964 22 11 255789887 56888877764
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.65 E-value=7.5e-05 Score=76.50 Aligned_cols=113 Identities=16% Similarity=0.093 Sum_probs=81.6
Q ss_pred cCChhHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCC--ceeEeccChhhHHHHHH----HHhcCCCEEEEEcC
Q 002310 724 RIRDDAAHVVNSLSSQG-IGVYMLSGDKKNSAEYVASLVGIPK--DKVLSGVKPNEKKRFIN----ELQNDENVVAMVGD 796 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aG-I~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar~~Pe~K~~iV~----~Lq~~G~~VamvGD 796 (937)
++.+++.+.++.|++.| +++.++|+........+.+.+|+.. +.+++.-.| |.+.++ .+.-....+.||||
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~kp--k~~~~~~~~~~lgi~~~~~i~iGD 182 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMSDK--TEKEYLRLLSILQIAPSELLMVGN 182 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEESCC--SHHHHHHHHHHHTCCGGGEEEEES
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeecCCC--CHHHHHHHHHHhCCCcceEEEECC
Confidence 67899999999999999 9999999999989899999999843 244444444 334333 33333457999999
Q ss_pred Cc-ccHHHHHhCCeeEEeC-------CChHHHHhhc-CEEEeCCChhHHHHHH
Q 002310 797 GI-NDAAALASSHIGVAMG-------GGVGAASEVA-SVVLMGNRLSQLLVAL 840 (937)
Q Consensus 797 G~-NDa~AL~~AdVGIamg-------~gt~~a~~aA-DivL~~~~l~~l~~~i 840 (937)
+. ||..|.+.|++++++- .+.......+ |+++ +++..++.++
T Consensus 183 ~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 183 SFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp CCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred CcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 96 9999999999998872 2222223333 7776 4677776653
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00013 Score=72.60 Aligned_cols=99 Identities=14% Similarity=0.154 Sum_probs=70.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeEec-----cC--hhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLSG-----VK--PNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~ar-----~~--Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
.+.|++.+.++.|++.|+++.++|++.. .+..+.+.+|+... .+++. .. |+--..+.+.+.-. .+.++
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~i 158 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVI 158 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEEE
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEEE
Confidence 3689999999999999999999998865 56778888898531 22221 11 22223333333323 68999
Q ss_pred cCCcccHHHHHhCCeeEEeCCChHHHHhhcC
Q 002310 795 GDGINDAAALASSHIGVAMGGGVGAASEVAS 825 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIamg~gt~~a~~aAD 825 (937)
||+.||..|++.|++++++.......++..+
T Consensus 159 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 159 GDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp ESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 9999999999999999888755554555443
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.62 E-value=2e-05 Score=82.67 Aligned_cols=113 Identities=14% Similarity=0.127 Sum_probs=75.8
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH-HHcCCCC--ceeE-ec--cChhhH--HHHHH-HHhcCC-----
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA-SLVGIPK--DKVL-SG--VKPNEK--KRFIN-ELQNDE----- 788 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA-~~~GI~~--~~v~-ar--~~Pe~K--~~iV~-~Lq~~G----- 788 (937)
-.+.+++.+.++.|++.|+++.++|+.........- +..|+.. +.++ +. ..+..| .++++ .+++.|
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~ 190 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAM 190 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCG
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCCc
Confidence 368899999999999999999999999876655433 2234311 1222 22 111112 22222 333333
Q ss_pred CEEEEEcCCcccHHHHHhCC---eeEEeCCChHHHHhhcCEEEeCCChhHHH
Q 002310 789 NVVAMVGDGINDAAALASSH---IGVAMGGGVGAASEVASVVLMGNRLSQLL 837 (937)
Q Consensus 789 ~~VamvGDG~NDa~AL~~Ad---VGIamg~gt~~a~~aADivL~~~~l~~l~ 837 (937)
..+.||||+.||..|.+.|+ |+|++|.+.+..+..||.++ +++..+.
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~--~sl~el~ 240 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVL--NSLQDFQ 240 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEEC--SCGGGCC
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEee--cCHHHhh
Confidence 67999999999999999999 56666766666778899987 3555543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00011 Score=75.79 Aligned_cols=113 Identities=17% Similarity=0.184 Sum_probs=81.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeE-ecc----Ch--hhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGV----KP--NEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~-ar~----~P--e~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|+ .|+++.++|+........+.+.+|+.. +.++ +.. .| +--..+.+.+.-....++||
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~i 185 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMI 185 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 57899999999999 999999999999999999999999852 1222 221 22 22222333333334579999
Q ss_pred cCCc-ccHHHHHhCCeeEEeCCChH--HHHhhcCEEEeCCChhHHHHH
Q 002310 795 GDGI-NDAAALASSHIGVAMGGGVG--AASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 795 GDG~-NDa~AL~~AdVGIamg~gt~--~a~~aADivL~~~~l~~l~~~ 839 (937)
||+. ||..|.+.|++++++.+... .....+|+++ +++..+..+
T Consensus 186 GD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi--~sl~e~~~~ 231 (240)
T 3qnm_A 186 GDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHI--HSLKELMNL 231 (240)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEE--SSTHHHHHH
T ss_pred CCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEE--CCHHHHHHH
Confidence 9995 99999999999999963222 4455789888 456666554
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00012 Score=75.40 Aligned_cols=115 Identities=14% Similarity=0.221 Sum_probs=82.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeE-eccChhh--HHHHHH-HHhcCC----CEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKPNE--KKRFIN-ELQNDE----NVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~-ar~~Pe~--K~~iV~-~Lq~~G----~~Vam 793 (937)
.+.|++.+.++.|++. +++.++|+.....+..+.+.+|+.. +.++ +...+.. |...++ .+++.| ..+.|
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~ 181 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLI 181 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEE
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHeEE
Confidence 6789999999999999 9999999999999999999999852 1222 2221111 223333 333444 57999
Q ss_pred EcCCc-ccHHHHHhCCee-EEeCCC--hHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 794 VGDGI-NDAAALASSHIG-VAMGGG--VGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 794 vGDG~-NDa~AL~~AdVG-Iamg~g--t~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
|||+. ||..|.+.|+++ |.++.+ .+..+..+|+++ +++..+..+++
T Consensus 182 vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~ 231 (238)
T 3ed5_A 182 IGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEI--RKLEELYHILN 231 (238)
T ss_dssp EESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred ECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence 99998 999999999995 444433 445566789988 56888877664
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00013 Score=76.02 Aligned_cols=114 Identities=15% Similarity=0.084 Sum_probs=84.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEe-----ccChhhHHHHHH-HHhcC---CCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-----GVKPNEKKRFIN-ELQND---ENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~a-----r~~Pe~K~~iV~-~Lq~~---G~~Vamv 794 (937)
++.+++.+.++.|++. +++.++|+........+.+.+|+.-+.+++ ...|+ ...++ .+++. ...+.||
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~kp~--~~~~~~~~~~lgi~~~~~~~i 192 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWDVIIGSDINRKYKPD--PQAYLRTAQVLGLHPGEVMLA 192 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCSCCCCHHHHTCCTTS--HHHHHHHHHHTTCCGGGEEEE
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCeeEEEEcCcCCCCCCC--HHHHHHHHHHcCCChHHEEEE
Confidence 5679999999999997 999999999999999999999985223222 12232 23333 23333 3579999
Q ss_pred cCCcccHHHHHhCCeeEEeCCChH---------H-HHhhcCEEEeCCChhHHHHHHHH
Q 002310 795 GDGINDAAALASSHIGVAMGGGVG---------A-ASEVASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIamg~gt~---------~-a~~aADivL~~~~l~~l~~~i~~ 842 (937)
||+.||..|.+.|+++++|..... . ....+|+++ +++..+..++..
T Consensus 193 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 193 AAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred eCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 999999999999999999963111 1 245789888 578888877653
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00011 Score=77.37 Aligned_cols=114 Identities=18% Similarity=0.158 Sum_probs=84.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-c----c--ChhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G----V--KPNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r----~--~Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+.. +.+++ . . .|+--..+.+.+.-....+.||
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v 170 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFV 170 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEE
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEEE
Confidence 67899999999999 99999999999999999999999852 12322 2 1 2333344455554444678999
Q ss_pred cCCcccHHHHHhCCeeEEeCCC---------------------------hHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 795 GDGINDAAALASSHIGVAMGGG---------------------------VGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIamg~g---------------------------t~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
||+.||..|.+.|++...+... .+..+..+|.++ +++..+..++.
T Consensus 171 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 242 (253)
T 1qq5_A 171 SSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV--PALGDLPRLVR 242 (253)
T ss_dssp ESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE--SSGGGHHHHHH
T ss_pred eCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee--CCHHHHHHHHH
Confidence 9999999999999999988643 112234588887 56888877654
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00013 Score=77.98 Aligned_cols=106 Identities=12% Similarity=0.065 Sum_probs=76.5
Q ss_pred cCChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCC-ceeEe-cc------ChhhHHHHHHHHhc-------C
Q 002310 724 RIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYVASLVGIPK-DKVLS-GV------KPNEKKRFINELQN-------D 787 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~a-GI~v~mlTGD~~~tA~~iA~~~GI~~-~~v~a-r~------~Pe~K~~iV~~Lq~-------~ 787 (937)
.+.+++.+.++.|++. |+++.++|+.....+..+.+.+|+.. +.+++ .. .|+--..+.+.+.- .
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~~ 193 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPS 193 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSSCGG
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCccCEEEEcccCCCCCCChHHHHHHHHHcCCCccccCCC
Confidence 4579999999999999 99999999999999999999999852 12222 21 12222334444444 4
Q ss_pred CCEEEEEcCCcccHHHHHhCCeeEEe---CCChHHHHh-hcCEEEe
Q 002310 788 ENVVAMVGDGINDAAALASSHIGVAM---GGGVGAASE-VASVVLM 829 (937)
Q Consensus 788 G~~VamvGDG~NDa~AL~~AdVGIam---g~gt~~a~~-aADivL~ 829 (937)
...+.++||+.||..|++.|++++++ +.+.+..++ .||.++.
T Consensus 194 ~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~ 239 (275)
T 2qlt_A 194 KSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVK 239 (275)
T ss_dssp GSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEES
T ss_pred cceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC
Confidence 45699999999999999999977666 433333333 5898874
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00017 Score=74.20 Aligned_cols=115 Identities=13% Similarity=0.168 Sum_probs=82.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-------cChhhHHHHHHHHhc---CCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-------VKPNEKKRFINELQN---DENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-------~~Pe~K~~iV~~Lq~---~G~~Vam 793 (937)
++.|++.+.++.|++ |+++.++|+........+.+.++-.-+.+++. -.|+-....++.+++ ....+.|
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~~~~ 177 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDILH 177 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchhEEE
Confidence 678999999999999 89999999999888887777665422333332 233333345333443 3457999
Q ss_pred EcCCc-ccHHHHHhCCeeEEeCCCh-----------HHHHhhcCEEEeCCChhHHHHHHH
Q 002310 794 VGDGI-NDAAALASSHIGVAMGGGV-----------GAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 794 vGDG~-NDa~AL~~AdVGIamg~gt-----------~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
|||+. ||..|.++|++++++.... +..+..+|+++ +++..+..++.
T Consensus 178 vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l~ 235 (240)
T 3smv_A 178 TAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAHK 235 (240)
T ss_dssp EESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHHH
T ss_pred ECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHHH
Confidence 99996 9999999999999994211 23346789988 56887777664
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00014 Score=74.31 Aligned_cols=113 Identities=17% Similarity=0.240 Sum_probs=80.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEecc-ChhhHHHHHHH-HhcCC---CEEEEEcC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSGV-KPNEKKRFINE-LQNDE---NVVAMVGD 796 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar~-~Pe~K~~iV~~-Lq~~G---~~VamvGD 796 (937)
++.|++.+.++.|++ |+++.++|+.....+..+-+.+|+.. +.+++.- .+.-|.++++. +++.| ..+.||||
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgD 162 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGD 162 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEEECC
Confidence 567999999999999 99999999999888888999999852 2333321 12234444443 34433 46999999
Q ss_pred CcccHHHHHhCCe---eEEeCCC-hHHHH-hhcCEEEeCCChhHHHHH
Q 002310 797 GINDAAALASSHI---GVAMGGG-VGAAS-EVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 797 G~NDa~AL~~AdV---GIamg~g-t~~a~-~aADivL~~~~l~~l~~~ 839 (937)
+.||..|.++|++ +|++|.+ .+..+ ..+|.++. ++..+..+
T Consensus 163 s~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~--~~~el~~~ 208 (210)
T 2ah5_A 163 TKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAY 208 (210)
T ss_dssp SHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHH
T ss_pred CHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHHH
Confidence 9999999999998 6666644 33333 35898874 46665543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00047 Score=72.95 Aligned_cols=66 Identities=27% Similarity=0.293 Sum_probs=51.4
Q ss_pred hHHHHHHHHhc----CCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 776 EKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 776 ~K~~iV~~Lq~----~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.|...++.+.+ ....+.++||+.||.+|++.|++|++|+++.+..++.||.++.+.+=..+..+++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 56555555543 2346899999999999999999999999888888899999986555444776654
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00015 Score=76.92 Aligned_cols=116 Identities=21% Similarity=0.237 Sum_probs=83.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-------ccChhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-------GVKPNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-------r~~Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+.. +.+++ .-.|+--..+.+.+.-....+.||
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~v 184 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHV 184 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEEE
Confidence 46799999999999999999999987664 578888999842 12222 123344455566665555679999
Q ss_pred cCCc-ccHHHHHhCCeeEEeC-CCh--HH---HHhhcCEEEeCCChhHHHHHHHH
Q 002310 795 GDGI-NDAAALASSHIGVAMG-GGV--GA---ASEVASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 795 GDG~-NDa~AL~~AdVGIamg-~gt--~~---a~~aADivL~~~~l~~l~~~i~~ 842 (937)
||+. ||..|.++|++++.+. .+. .. ....+|.++ +++..+..++..
T Consensus 185 GD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~~ 237 (263)
T 3k1z_A 185 GDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALDC 237 (263)
T ss_dssp ESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHHH
T ss_pred CCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHHH
Confidence 9997 9999999999999995 221 11 223588887 567777776653
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00048 Score=72.01 Aligned_cols=115 Identities=11% Similarity=0.118 Sum_probs=83.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEeccCh--hhHHHHHHHHhcCCCEEEEEcCCc-
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSGVKP--NEKKRFINELQNDENVVAMVGDGI- 798 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar~~P--e~K~~iV~~Lq~~G~~VamvGDG~- 798 (937)
.+.|++.+.++.|+ .|+++.++|+..........+.+|+.. +.+++.-.| +--..+.+.+.-....++||||+.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~ 190 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVVSEKDPQTYARVLSEFDLPAERFVMIGNSLR 190 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCC
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeeeCCCCHHHHHHHHHHhCcCchhEEEECCCch
Confidence 56899999999999 999999999999998999999999852 244444344 333444555554456799999999
Q ss_pred ccHHHHHhCCeeEEeC-CChH--------HHHhhcCE-EEeCCChhHHHHHHH
Q 002310 799 NDAAALASSHIGVAMG-GGVG--------AASEVASV-VLMGNRLSQLLVALE 841 (937)
Q Consensus 799 NDa~AL~~AdVGIamg-~gt~--------~a~~aADi-vL~~~~l~~l~~~i~ 841 (937)
||..|.+.|++++++- .|.. .....+|. ++ +++..+..+++
T Consensus 191 ~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 191 SDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp CCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred hhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 9999999999998773 3321 11235786 55 56888776654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00012 Score=76.71 Aligned_cols=61 Identities=20% Similarity=0.361 Sum_probs=51.4
Q ss_pred hHHHHHHHHhcCCCEEEEEcCCcccHHHHHhC--CeeEEeCCChHHHHhhcCEEEeC-CChhHHHHHHH
Q 002310 776 EKKRFINELQNDENVVAMVGDGINDAAALASS--HIGVAMGGGVGAASEVASVVLMG-NRLSQLLVALE 841 (937)
Q Consensus 776 ~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~A--dVGIamg~gt~~a~~aADivL~~-~~l~~l~~~i~ 841 (937)
.|..-++.|.+.-. |+++||+.||.+||+.| +.||+||++ ++.||.++.+ ++-..+.++++
T Consensus 160 ~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 160 NKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp CHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 79999999877644 99999999999999999 999999987 6789998876 55666666654
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00057 Score=68.59 Aligned_cols=90 Identities=14% Similarity=0.204 Sum_probs=70.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----c--ChhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----V--KPNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~--~Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.| ++.++|+........+.+.+|+.. +.+++. . .|+--..+.+.+.-....+.||
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v 164 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMV 164 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEEe
Confidence 47899999999999999 999999999999999999999842 123221 2 2333344555555445679999
Q ss_pred cCCcccHHHHHhCCeeEEeC
Q 002310 795 GDGINDAAALASSHIGVAMG 814 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIamg 814 (937)
||+.||..|.+.|++...+-
T Consensus 165 gD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 165 DDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp ESCHHHHHHHHHTTCEEEEC
T ss_pred CCCHHHHHHHHHCCCEEEEE
Confidence 99999999999999988775
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00016 Score=67.81 Aligned_cols=101 Identities=17% Similarity=0.154 Sum_probs=71.0
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cCh--hh
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKP--NE 776 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~P--e~ 776 (937)
.+.+..|+++ .-..++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.. +.+++. ..| +-
T Consensus 4 ~i~~D~DgtL----~~~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp~~~~ 79 (137)
T 2pr7_A 4 GLIVDYAGVL----DGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVEKPEEAA 79 (137)
T ss_dssp EEEECSTTTT----SSCHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCCTTSHHH
T ss_pred EEEEecccee----cCCCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCCCCCHHH
Confidence 3445555554 1133577899999999999999999999999888888888888753 233321 233 22
Q ss_pred HHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCee
Q 002310 777 KKRFINELQNDENVVAMVGDGINDAAALASSHIG 810 (937)
Q Consensus 777 K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVG 810 (937)
-..+.+.+.-....+.||||..+|..+.+++++-
T Consensus 80 ~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 80 FQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLV 113 (137)
T ss_dssp HHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCE
Confidence 3334444433344699999999999999999874
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00025 Score=77.12 Aligned_cols=70 Identities=29% Similarity=0.287 Sum_probs=58.5
Q ss_pred cChh--hHHHHHHHHhcC-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEe-CCChhHHHHHHH
Q 002310 772 VKPN--EKKRFINELQND-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLM-GNRLSQLLVALE 841 (937)
Q Consensus 772 ~~Pe--~K~~iV~~Lq~~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~-~~~l~~l~~~i~ 841 (937)
+.|. .|...++.+.+. | ..|+++||+.||.+|++.|++||+|+++.+..++.||.++. +++-..+.++++
T Consensus 218 i~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 218 VTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp EEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred ecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 3444 788888887553 3 36899999999999999999999999888888999999998 777777877765
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0003 Score=75.00 Aligned_cols=67 Identities=24% Similarity=0.263 Sum_probs=56.2
Q ss_pred hhHHHHHHHHhcC-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 775 NEKKRFINELQND-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 775 e~K~~iV~~Lq~~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
..|...++.+.+. | ..++++||+.||.+|++.|++||+|+++.+..++.||.|+.+++-..+.++++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 4788888777553 3 46999999999999999999999999888888999999988776677777665
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00027 Score=76.15 Aligned_cols=66 Identities=26% Similarity=0.354 Sum_probs=55.6
Q ss_pred hHHHHHHHHhcC----CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 776 EKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 776 ~K~~iV~~Lq~~----G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.|..-++.+.+. ...++++||+.||.+|++.|++||+|+++.+..++.||.++.+++-..+.++++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 677777776553 246999999999999999999999999888888999999998777777877765
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00027 Score=75.31 Aligned_cols=70 Identities=23% Similarity=0.356 Sum_probs=58.0
Q ss_pred cChh--hHHHHHHHHhcC----CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 772 VKPN--EKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 772 ~~Pe--~K~~iV~~Lq~~----G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+.|. .|...++.+.+. ...++++||+.||.+|++.|++|++|+++.+..++.||.++.+++-..+.++++
T Consensus 184 i~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 184 IVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp EECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 4454 788888877553 346899999999999999999999999888888899999998877777777664
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00025 Score=71.80 Aligned_cols=91 Identities=16% Similarity=0.192 Sum_probs=69.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------cCCCC--ceeEe-----ccCh--hhHHHHHHHHhcCC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL------VGIPK--DKVLS-----GVKP--NEKKRFINELQNDE 788 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~------~GI~~--~~v~a-----r~~P--e~K~~iV~~Lq~~G 788 (937)
++.|++.+.++.|++ |+++.++|+........+.+. .|+.. +.+++ ...| +--..+.+.+.-..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 167 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKP 167 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCCG
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCCh
Confidence 467999999999999 999999999998888888887 68742 13332 1223 33344555554445
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEeCC
Q 002310 789 NVVAMVGDGINDAAALASSHIGVAMGG 815 (937)
Q Consensus 789 ~~VamvGDG~NDa~AL~~AdVGIamg~ 815 (937)
..+.||||+.||..|.+.|+++..+.+
T Consensus 168 ~~~~~igD~~~Di~~a~~aG~~~~~~~ 194 (211)
T 2i6x_A 168 EETLFIDDGPANVATAERLGFHTYCPD 194 (211)
T ss_dssp GGEEEECSCHHHHHHHHHTTCEEECCC
T ss_pred HHeEEeCCCHHHHHHHHHcCCEEEEEC
Confidence 679999999999999999999998864
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0022 Score=64.90 Aligned_cols=113 Identities=12% Similarity=0.077 Sum_probs=75.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-----cCh--hhHHHHHHHHhcCC-CEEEEEc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----VKP--NEKKRFINELQNDE-NVVAMVG 795 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-----~~P--e~K~~iV~~Lq~~G-~~VamvG 795 (937)
++.|++.++++.|++.|+++.++||-....+..+.+ ... +.+++. -.| +-=....+.+.-.. ..+.|||
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-~~~--d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VG 112 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-PVN--DWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLIS 112 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-TTT--TTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEE
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-ccC--CEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEe
Confidence 567999999999999999999999998888766554 212 233332 223 22223333333222 4689999
Q ss_pred CCcccHHHHHhCCe-eEEeCCChH---------------------------HHHhhcCEEEeCCChhHHHHHHH
Q 002310 796 DGINDAAALASSHI-GVAMGGGVG---------------------------AASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 796 DG~NDa~AL~~AdV-GIamg~gt~---------------------------~a~~aADivL~~~~l~~l~~~i~ 841 (937)
|..+|..+-++|.+ .|++..|.. .....+|.++ +++..+..++.
T Consensus 113 Ds~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi--~~~~eL~~~l~ 184 (196)
T 2oda_A 113 GDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVI--DHLGELESCLA 184 (196)
T ss_dssp SCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--SSGGGHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEe--CCHHHHHHHHH
Confidence 99999999999997 455543210 1123478887 56888877654
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.002 Score=72.25 Aligned_cols=115 Identities=21% Similarity=0.286 Sum_probs=82.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--c--eeEec----------------cChhhHHHHHHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--D--KVLSG----------------VKPNEKKRFINE 783 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~--~v~ar----------------~~Pe~K~~iV~~ 783 (937)
++.|++.++++.|+++|+++.++|+-....+..+-+.+|+.. + .+++. ..|.-. -+...
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~-~~~~a 293 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPF-SYIAA 293 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTH-HHHHH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHH-HHHHH
Confidence 678999999999999999999999999999999999999853 1 23331 223222 12333
Q ss_pred HhcCC-----------------CEEEEEcCCcccHHHHHhCCee-EEeCCCh-------HHHHhhcCEEEeCCChhHHHH
Q 002310 784 LQNDE-----------------NVVAMVGDGINDAAALASSHIG-VAMGGGV-------GAASEVASVVLMGNRLSQLLV 838 (937)
Q Consensus 784 Lq~~G-----------------~~VamvGDG~NDa~AL~~AdVG-Iamg~gt-------~~a~~aADivL~~~~l~~l~~ 838 (937)
+++.| ..+.||||..+|..|-++|++- |++..|. +.....+|.++ +++..+..
T Consensus 294 ~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi--~sl~eL~~ 371 (384)
T 1qyi_A 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRG 371 (384)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSGGGHHH
T ss_pred HHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE--CCHHHHHH
Confidence 44433 5799999999999999999976 4444331 22233689887 46887776
Q ss_pred HHH
Q 002310 839 ALE 841 (937)
Q Consensus 839 ~i~ 841 (937)
+++
T Consensus 372 ~l~ 374 (384)
T 1qyi_A 372 VLD 374 (384)
T ss_dssp HHS
T ss_pred HHH
Confidence 653
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00036 Score=73.27 Aligned_cols=66 Identities=18% Similarity=0.152 Sum_probs=53.9
Q ss_pred hHHHHHHHHhcC-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhh-------cCEEEeCCChhHHHHHHH
Q 002310 776 EKKRFINELQND-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV-------ASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 776 ~K~~iV~~Lq~~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~a-------ADivL~~~~l~~l~~~i~ 841 (937)
.|..-++.+.+. | ..|+++||+.||.+|++.|++||+||++.+..++. ||++..+++-..+.++++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 677777776543 2 46899999999999999999999999888888885 788887777777777665
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0025 Score=64.67 Aligned_cols=87 Identities=14% Similarity=0.103 Sum_probs=68.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeE-e----ccCh--hhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVL-S----GVKP--NEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~-a----r~~P--e~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++.|+++.++|+.....+..+-+.+|+..- .++ + ...| +-=....+.+.-....+.||
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~V 163 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVF 163 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccceEEE
Confidence 4679999999999999999999999999999999999998531 111 1 1233 33344555555555679999
Q ss_pred cCCcccHHHHHhCCee
Q 002310 795 GDGINDAAALASSHIG 810 (937)
Q Consensus 795 GDG~NDa~AL~~AdVG 810 (937)
||..+|..+-++|++.
T Consensus 164 gDs~~Di~aA~~aG~~ 179 (216)
T 3kbb_A 164 EDSKSGVEAAKSAGIE 179 (216)
T ss_dssp ECSHHHHHHHHHTTCC
T ss_pred ecCHHHHHHHHHcCCc
Confidence 9999999999999974
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.002 Score=68.10 Aligned_cols=114 Identities=17% Similarity=0.200 Sum_probs=81.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ce-eEecc----C--hhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DK-VLSGV----K--PNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~-v~ar~----~--Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++ ++++.++|+.....+..+.+.+|+.. +. +.+.- . |+--..+.+.+.-....+.||
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v 199 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV 199 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEEEE
Confidence 678999999999998 59999999999999999999999852 12 22222 2 233344455554445679999
Q ss_pred cC-CcccHHHHHhCCe--eEEeCCChH---HHHhhcCEEEeCCChhHHHHHH
Q 002310 795 GD-GINDAAALASSHI--GVAMGGGVG---AASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 795 GD-G~NDa~AL~~AdV--GIamg~gt~---~a~~aADivL~~~~l~~l~~~i 840 (937)
|| ..||..+-++|++ .|.+..+.. .....+|.++ +++..+..++
T Consensus 200 GDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~l 249 (260)
T 2gfh_A 200 GDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALL 249 (260)
T ss_dssp ESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHH
T ss_pred CCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEE--CCHHHHHHHH
Confidence 99 5999999999999 677753321 1223578876 4577776655
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0021 Score=68.04 Aligned_cols=56 Identities=11% Similarity=0.118 Sum_probs=42.4
Q ss_pred CeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCC
Q 002310 704 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG---DKKNSAEYVASLVGI 763 (937)
Q Consensus 704 ~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTG---D~~~tA~~iA~~~GI 763 (937)
...+++..||+++- .+.+-++++++|++|+++|++++++|| -.........+++|+
T Consensus 8 ~kli~~DlDGTLl~----~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~ 66 (268)
T 3qgm_A 8 KKGYIIDIDGVIGK----SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGL 66 (268)
T ss_dssp CSEEEEECBTTTEE----TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTC
T ss_pred CCEEEEcCcCcEEC----CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCC
Confidence 45677888888653 556678999999999999999999999 455544444455554
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0013 Score=67.64 Aligned_cols=89 Identities=20% Similarity=0.182 Sum_probs=65.6
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCceeE-ecc--------------
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVGIPKDKVL-SGV-------------- 772 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~---------------~tA~~iA~~~GI~~~~v~-ar~-------------- 772 (937)
.++.|++.++++.|++.|+++.++|+... .....+.+++|+.-+.++ +..
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~g~~~~~~~~~~ 134 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHP 134 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCT
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEeecCCCCceeecccCCc
Confidence 47889999999999999999999999887 677888899997423333 321
Q ss_pred --Chh--hHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 002310 773 --KPN--EKKRFINELQNDENVVAMVGDGINDAAALASSHIGV 811 (937)
Q Consensus 773 --~Pe--~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGI 811 (937)
.|+ -=..+.+.+.-....++||||+.||..+.++|++..
T Consensus 135 ~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 135 MRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp TSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred cCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 121 112233344333456999999999999999999764
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00023 Score=71.69 Aligned_cols=91 Identities=14% Similarity=0.185 Sum_probs=65.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCC--ceeEec-----cCh--hhHHHHHHHHhcCCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL-VGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~-~GI~~--~~v~ar-----~~P--e~K~~iV~~Lq~~G~~Vam 793 (937)
++.|++.+.++.|++.|+++.++|+........+.+. .|+.. +.+++. ..| +--..+.+.+.-....+.|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 170 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVF 170 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 5689999999999999999999998776654443333 44321 133321 233 3444555666555567999
Q ss_pred EcCCcccHHHHHhCCeeEEeC
Q 002310 794 VGDGINDAAALASSHIGVAMG 814 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVGIamg 814 (937)
|||+.||..|.+.|++...+.
T Consensus 171 vgD~~~Di~~a~~aG~~~~~~ 191 (206)
T 2b0c_A 171 FDDNADNIEGANQLGITSILV 191 (206)
T ss_dssp EESCHHHHHHHHTTTCEEEEC
T ss_pred eCCCHHHHHHHHHcCCeEEEe
Confidence 999999999999999988775
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0029 Score=64.69 Aligned_cols=109 Identities=16% Similarity=0.204 Sum_probs=76.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-------cChhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-------~~Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++. +++.++|+.... -+.+|+.. +.+++. -.|+--..+.+.+.-....+.||
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v 178 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHV 178 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEEE
Confidence 5789999999999998 999999987655 35567641 122221 12223344555554445679999
Q ss_pred cCCc-ccHHHHHhCCeeEEe---C-CChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 795 GDGI-NDAAALASSHIGVAM---G-GGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 795 GDG~-NDa~AL~~AdVGIam---g-~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
||+. ||..|.+.|+++..+ + ...+. ...+|+++ +++..+..+++
T Consensus 179 GD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l~ 227 (230)
T 3vay_A 179 GDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVLA 227 (230)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHHH
T ss_pred eCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHHH
Confidence 9998 999999999999887 2 22222 56788888 56888877654
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.001 Score=70.31 Aligned_cols=64 Identities=19% Similarity=0.233 Sum_probs=51.4
Q ss_pred hhHHHHHHHHhcC-C-----CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 775 NEKKRFINELQND-E-----NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 775 e~K~~iV~~Lq~~-G-----~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
..|..-++.+.++ | ..|+++||+.||.+|++.|++||+|+++.+ . .++++..+++-..+.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 4787777776554 3 569999999999999999999999998877 3 6788887777666666655
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0015 Score=67.30 Aligned_cols=92 Identities=15% Similarity=0.144 Sum_probs=69.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH------HHcCCCC--ceeEec-----cCh--hhHHHHHHHHhcCC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA------SLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDE 788 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA------~~~GI~~--~~v~ar-----~~P--e~K~~iV~~Lq~~G 788 (937)
++.|++.+.++.|++. +++.++|+........+. +..|+.. +.+++. ..| +--..+.+.+.-..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~ 190 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDP 190 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCH
Confidence 4679999999999999 999999999999888776 4556531 123221 233 44445666665555
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEeCCC
Q 002310 789 NVVAMVGDGINDAAALASSHIGVAMGGG 816 (937)
Q Consensus 789 ~~VamvGDG~NDa~AL~~AdVGIamg~g 816 (937)
..+.||||+.||..+.++|+++..+...
T Consensus 191 ~~~~~vGD~~~Di~~a~~aG~~~i~v~~ 218 (229)
T 4dcc_A 191 KETFFIDDSEINCKVAQELGISTYTPKA 218 (229)
T ss_dssp GGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred HHeEEECCCHHHHHHHHHcCCEEEEECC
Confidence 6899999999999999999999888643
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0013 Score=70.24 Aligned_cols=66 Identities=20% Similarity=0.093 Sum_probs=34.1
Q ss_pred hHHHHHHHHhcC-C----CE--EEEEcCCcccHHHHHhCCeeEEeCCCh---HHHHhh--cC-EEEeCCChhHHHHHHH
Q 002310 776 EKKRFINELQND-E----NV--VAMVGDGINDAAALASSHIGVAMGGGV---GAASEV--AS-VVLMGNRLSQLLVALE 841 (937)
Q Consensus 776 ~K~~iV~~Lq~~-G----~~--VamvGDG~NDa~AL~~AdVGIamg~gt---~~a~~a--AD-ivL~~~~l~~l~~~i~ 841 (937)
.|..-++.+.+. | .. |+++||+.||.+|++.|++||+|+++. +..++. || ++..+++-..+.++++
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 677766665432 2 34 999999999999999999999999876 444443 78 7777766666666654
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0018 Score=68.22 Aligned_cols=81 Identities=16% Similarity=0.234 Sum_probs=66.0
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCCc---eeEeccChhhHHHHHHHHhcCC-CEEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKK----NSAEYVASLVGIPKD---KVLSGVKPNEKKRFINELQNDE-NVVAMV 794 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~----~tA~~iA~~~GI~~~---~v~ar~~Pe~K~~iV~~Lq~~G-~~Vamv 794 (937)
.++.|++.+.++.|++.|+++.++||-.. ..+....+++||+.. .++-|-...+|....+.+++.| ..|+++
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L~~~gy~iv~~i 179 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQVEDMGYDIVLFV 179 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSCSSSHHHHHHHHTTTCEEEEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCCCChHHHHHHHHhcCCCEEEEE
Confidence 57889999999999999999999998754 477777888999742 3555544578999999998854 478999
Q ss_pred cCCcccHHH
Q 002310 795 GDGINDAAA 803 (937)
Q Consensus 795 GDG~NDa~A 803 (937)
||-.+|.++
T Consensus 180 GD~~~Dl~~ 188 (260)
T 3pct_A 180 GDNLNDFGD 188 (260)
T ss_dssp ESSGGGGCG
T ss_pred CCChHHcCc
Confidence 999999865
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0009 Score=70.42 Aligned_cols=54 Identities=20% Similarity=0.153 Sum_probs=42.8
Q ss_pred hhHHHHHHHHhcC-----CCEEEEEcCCcccHHHHHhCCeeEEeCCCh-HHHHhhcCEEE
Q 002310 775 NEKKRFINELQND-----ENVVAMVGDGINDAAALASSHIGVAMGGGV-GAASEVASVVL 828 (937)
Q Consensus 775 e~K~~iV~~Lq~~-----G~~VamvGDG~NDa~AL~~AdVGIamg~gt-~~a~~aADivL 828 (937)
-.|..-++.|.+. ...|+++||+.||.+||+.|++||+||++. +..++.||+++
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~ 237 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIID 237 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEe
Confidence 3687777766543 357999999999999999999999999877 55666677654
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0023 Score=67.48 Aligned_cols=81 Identities=17% Similarity=0.226 Sum_probs=65.7
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCC-c--eeEeccChhhHHHHHHHHhcCC-CEEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKK----NSAEYVASLVGIPK-D--KVLSGVKPNEKKRFINELQNDE-NVVAMV 794 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~----~tA~~iA~~~GI~~-~--~v~ar~~Pe~K~~iV~~Lq~~G-~~Vamv 794 (937)
+++.|++.+.++.|++.|+++.++||-.. ..+..-.+++||+. + .++-|-.-..|....+.+++.| ..|++|
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~Gy~iv~~v 179 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDKSAKAARFAEIEKQGYEIVLYV 179 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHHHHTTEEEEEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCCCChHHHHHHHHhcCCCEEEEE
Confidence 57889999999999999999999998754 57777788899974 2 4665544567888888888875 478999
Q ss_pred cCCcccHHH
Q 002310 795 GDGINDAAA 803 (937)
Q Consensus 795 GDG~NDa~A 803 (937)
||-.+|.++
T Consensus 180 GD~~~Dl~~ 188 (262)
T 3ocu_A 180 GDNLDDFGN 188 (262)
T ss_dssp ESSGGGGCS
T ss_pred CCChHHhcc
Confidence 999999754
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0042 Score=68.06 Aligned_cols=96 Identities=21% Similarity=0.214 Sum_probs=75.5
Q ss_pred EEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCCCceeEecc---------------------
Q 002310 718 LIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL----VGIPKDKVLSGV--------------------- 772 (937)
Q Consensus 718 ~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~----~GI~~~~v~ar~--------------------- 772 (937)
.-.....+.+++.+.++.|++.|++|+++||=....++.+|.. .||++++|++-.
T Consensus 137 ~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg 216 (327)
T 4as2_A 137 LDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEG 216 (327)
T ss_dssp EEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTT
T ss_pred ccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeeccccccccccccccccc
Confidence 3345557899999999999999999999999999999999998 588888777621
Q ss_pred ---------------------ChhhHHHHHHHHhcCC-CEEEEEcCC-cccHHHHHh--CCeeEEe
Q 002310 773 ---------------------KPNEKKRFINELQNDE-NVVAMVGDG-INDAAALAS--SHIGVAM 813 (937)
Q Consensus 773 ---------------------~Pe~K~~iV~~Lq~~G-~~VamvGDG-~NDa~AL~~--AdVGIam 813 (937)
.=+.|...|+...+.| ..+++.||+ -.|.+||.. ++.|+.+
T Consensus 217 ~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 217 KYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp CCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred cccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 0245888888776544 468999999 479999965 4555544
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.014 Score=61.41 Aligned_cols=56 Identities=11% Similarity=0.160 Sum_probs=41.1
Q ss_pred CeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCC
Q 002310 704 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG---DKKNSAEYVASLVGI 763 (937)
Q Consensus 704 ~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTG---D~~~tA~~iA~~~GI 763 (937)
...+++..||+++- .+.+-++++++|++|+++|++++++|| -.........+++|+
T Consensus 6 ~kli~~DlDGTLl~----~~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~ 64 (266)
T 3pdw_A 6 YKGYLIDLDGTMYN----GTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDI 64 (266)
T ss_dssp CSEEEEECSSSTTC----HHHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTC
T ss_pred CCEEEEeCcCceEe----CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 35677778887642 245557899999999999999999998 555555555556665
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.012 Score=61.66 Aligned_cols=109 Identities=20% Similarity=0.219 Sum_probs=76.5
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-----ccC--hhhHHHHHHHHhcCCCEEE
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-----GVK--PNEKKRFINELQNDENVVA 792 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-----r~~--Pe~K~~iV~~Lq~~G~~Va 792 (937)
..++.|++.+.++.|++.|+++.+.|.-. .+..+-+.+|+.. +.+++ +.. |+-=..+++.+.-....+.
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l 191 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCI 191 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeE
Confidence 34678999999999999999998876543 3566788899853 12221 123 3344455666655556799
Q ss_pred EEcCCcccHHHHHhCCe-eEEeCCChHHHHhhcCEEEeCCChhHH
Q 002310 793 MVGDGINDAAALASSHI-GVAMGGGVGAASEVASVVLMGNRLSQL 836 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdV-GIamg~gt~~a~~aADivL~~~~l~~l 836 (937)
||||..+|..|-++|++ .|++++..+. +.||+++ +++..|
T Consensus 192 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~--~~ad~vi--~~l~eL 232 (250)
T 4gib_A 192 GIEDASAGIDAINSANMFSVGVGNYENL--KKANLVV--DSTNQL 232 (250)
T ss_dssp EEESSHHHHHHHHHTTCEEEEESCTTTT--TTSSEEE--SSGGGC
T ss_pred EECCCHHHHHHHHHcCCEEEEECChhHh--ccCCEEE--CChHhC
Confidence 99999999999999997 5666544332 3589887 456654
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0021 Score=63.71 Aligned_cols=93 Identities=19% Similarity=0.260 Sum_probs=65.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCceeE-e-----c----cChhhH-
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGD---------------KKNSAEYVASLVGIPKDKVL-S-----G----VKPNEK- 777 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD---------------~~~tA~~iA~~~GI~~~~v~-a-----r----~~Pe~K- 777 (937)
++.|++.++++.|++.|+++.++|+- ....+..+.+..|+.-+.++ + . ..|+-.
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~v~~s~~~~~~~~~~~KP~p~~ 121 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKL 121 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSCGG
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCeeEEEEcCCCCcccccccCCCHHH
Confidence 57899999999999999999999987 46778888999998633443 3 1 122211
Q ss_pred -HHHHHHHhcCCCEEEEEcCCcccHHHHHhCCee-EEeCCC
Q 002310 778 -KRFINELQNDENVVAMVGDGINDAAALASSHIG-VAMGGG 816 (937)
Q Consensus 778 -~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVG-Iamg~g 816 (937)
..+.+.+.-....+.||||..+|..+.++|.+- |.+..+
T Consensus 122 ~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 122 VERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp GGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred HHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 222333333345689999999999999999985 444433
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.013 Score=60.40 Aligned_cols=111 Identities=18% Similarity=0.195 Sum_probs=73.7
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEeccChhhHHHHHHHHhc--CCCEEEEEcCC
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSGVKPNEKKRFINELQN--DENVVAMVGDG 797 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~ar~~Pe~K~~iV~~Lq~--~G~~VamvGDG 797 (937)
-++.|++.++++.|++.| ++.++|+-....+..+.+.+|+.. ..+... ..|..+++.+.+ ....+.||||.
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~~---~~K~~~~~~~~~~~~~~~~~~vgDs 170 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEGRVLIY---IHKELMLDQVMECYPARHYVMVDDK 170 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTTCEEEE---SSGGGCHHHHHHHSCCSEEEEECSC
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEec---CChHHHHHHHHhcCCCceEEEEcCc
Confidence 378999999999999999 999999999999999999999741 111111 233333433332 44689999999
Q ss_pred cc---cHHHHHhCCee-EEeCCC----h-HHHHh--hcCEEEeCCChhHHHHH
Q 002310 798 IN---DAAALASSHIG-VAMGGG----V-GAASE--VASVVLMGNRLSQLLVA 839 (937)
Q Consensus 798 ~N---Da~AL~~AdVG-Iamg~g----t-~~a~~--aADivL~~~~l~~l~~~ 839 (937)
.| |..+-++|++- |.+..| . +...+ .+|.++ +++..+..+
T Consensus 171 ~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i--~~~~el~~~ 221 (231)
T 2p11_A 171 LRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTV--ERIGDLVEM 221 (231)
T ss_dssp HHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEE--SSGGGGGGC
T ss_pred cchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceee--cCHHHHHHH
Confidence 99 65566677754 333332 2 22223 288887 456665544
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.00 E-value=0.013 Score=63.19 Aligned_cols=90 Identities=11% Similarity=0.065 Sum_probs=66.9
Q ss_pred ecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHH--------cCCCCceeEec------cChhhHHHHHHH
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSA---EYVASL--------VGIPKDKVLSG------VKPNEKKRFINE 783 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA---~~iA~~--------~GI~~~~v~ar------~~Pe~K~~iV~~ 783 (937)
.++++.|++.++++.|++.|+++.++||-....+ ..+-+. .|+.-+.++.+ -.|+-|..+.+.
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~ 264 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWK 264 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHH
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCchheeeccCCCCcHHHHHHHHHHHH
Confidence 4578899999999999999999999999875432 333444 68743344432 235667777777
Q ss_pred HhcCCC-EEEEEcCCcccHHHHHhCCee
Q 002310 784 LQNDEN-VVAMVGDGINDAAALASSHIG 810 (937)
Q Consensus 784 Lq~~G~-~VamvGDG~NDa~AL~~AdVG 810 (937)
+..... .+.||||..+|+.|-++|++-
T Consensus 265 ~~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 265 HIAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp HTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred HhccccceEEEeCCcHHHHHHHHHcCCe
Confidence 754443 468999999999999999885
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=95.73 E-value=0.0036 Score=66.30 Aligned_cols=56 Identities=14% Similarity=0.306 Sum_probs=47.0
Q ss_pred hHHHHHHHHh-cCCCEEEEEcC----CcccHHHHHhCC-eeEEeCCChHHHHhhcCEEEeCC
Q 002310 776 EKKRFINELQ-NDENVVAMVGD----GINDAAALASSH-IGVAMGGGVGAASEVASVVLMGN 831 (937)
Q Consensus 776 ~K~~iV~~Lq-~~G~~VamvGD----G~NDa~AL~~Ad-VGIamg~gt~~a~~aADivL~~~ 831 (937)
.|..-++.|. -....|+++|| +.||.+||+.|+ +|++|+++.+..++.||+|..++
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPET 258 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCC
Confidence 6888888881 12357999999 999999999999 69999999999999999886543
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.30 E-value=0.011 Score=62.36 Aligned_cols=81 Identities=21% Similarity=0.328 Sum_probs=53.6
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCC--C--ceeEeccChhhHHHHHHHHhcCC-CEEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDK---KNSAEYVASLVGIP--K--DKVLSGVKPNEKKRFINELQNDE-NVVAMV 794 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~---~~tA~~iA~~~GI~--~--~~v~ar~~Pe~K~~iV~~Lq~~G-~~Vamv 794 (937)
.++-|++.++++.|++.|+++.++||-. .......-+.+|+. . +.+++.-.+ .|....+.+.+.| ..++||
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~-~K~~~~~~~~~~~~~~~l~V 178 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE-KGKEKRRELVSQTHDIVLFF 178 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC-CSSHHHHHHHHHHEEEEEEE
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC-CCcHHHHHHHHhCCCceEEe
Confidence 4677999999999999999999999987 34445555778986 1 233333211 1112222222223 368899
Q ss_pred cCCcccHHHH
Q 002310 795 GDGINDAAAL 804 (937)
Q Consensus 795 GDG~NDa~AL 804 (937)
||..||..+-
T Consensus 179 GDs~~Di~aA 188 (258)
T 2i33_A 179 GDNLSDFTGF 188 (258)
T ss_dssp ESSGGGSTTC
T ss_pred CCCHHHhccc
Confidence 9999998664
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.15 E-value=0.04 Score=54.26 Aligned_cols=112 Identities=13% Similarity=0.119 Sum_probs=65.4
Q ss_pred CCCCHHHHHHHHHhcc---cCCCCChHHHHHHHHHhcCCccccccCCceEEec---C-CeeEEEEc---Ce--EEEeccH
Q 002310 613 HPLSETEILKFAAGVE---SNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEP---G-SGTVAIIE---DR--KVSVGTI 680 (937)
Q Consensus 613 ~~~~~~~ll~~aa~~e---~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~---g-~g~~~~i~---~~--~~~~G~~ 680 (937)
.+.++++++.+++... ....+|++.||++++...+............++| . +-+...+. +. .++||++
T Consensus 11 ~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGAp 90 (170)
T 3gwi_A 11 SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90 (170)
T ss_dssp TSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCc
Confidence 3445577887776544 4568999999998765422110000001122222 2 22223332 22 4899999
Q ss_pred HHHHhcCCCCc------c---------hhhHHHHHhCCCeEEEEEE----------------CCEEEEEEEecCc
Q 002310 681 DWLRSHGVDTS------T---------FQEVEMEDLMNQSLVYVGV----------------DNMLAGLIYVEDR 724 (937)
Q Consensus 681 ~~l~~~~~~~~------~---------~~~~~~~~~~~~~~~~v~~----------------~~~~lG~i~l~D~ 724 (937)
+.+.+.|.... + .+..+....+|.+++.+++ |++|+|+++|-|.
T Consensus 91 E~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 91 QEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp HHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred HHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 99999886321 0 1123346678999888874 4689999999885
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.02 E-value=0.0069 Score=63.33 Aligned_cols=52 Identities=13% Similarity=0.257 Sum_probs=42.0
Q ss_pred hHHHHHHHH-hcCCCEEEEEcC----CcccHHHHHhCCe-eEEeCCChHHHHhhcCEE
Q 002310 776 EKKRFINEL-QNDENVVAMVGD----GINDAAALASSHI-GVAMGGGVGAASEVASVV 827 (937)
Q Consensus 776 ~K~~iV~~L-q~~G~~VamvGD----G~NDa~AL~~AdV-GIamg~gt~~a~~aADiv 827 (937)
.|..-++.| .-....|+++|| +.||.+||+.|+. |++|+++.+..++.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 677777777 112357999999 9999999999987 999999999999999876
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.02 E-value=0.046 Score=57.48 Aligned_cols=55 Identities=13% Similarity=0.209 Sum_probs=41.4
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCC
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLS---GDKKNSAEYVASLVGI 763 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlT---GD~~~tA~~iA~~~GI 763 (937)
..+.+..||+++- -...+ ++++++|++++++|++++++| |-.........+++|+
T Consensus 6 kli~~DlDGTLl~---~~~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~ 63 (264)
T 3epr_A 6 KGYLIDLDGTIYK---GKSRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNV 63 (264)
T ss_dssp CEEEECCBTTTEE---TTEEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTC
T ss_pred CEEEEeCCCceEe---CCEEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 4556666776542 23355 899999999999999999999 6777776666677776
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.01 E-value=0.015 Score=59.29 Aligned_cols=86 Identities=20% Similarity=0.200 Sum_probs=60.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-c----cChh--hHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G----VKPN--EKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r----~~Pe--~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|+... .+..+.+.+|+.. +.+++ . ..|+ --..+.+.+.-. . .||
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~--~-~~v 170 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYP--A-VHV 170 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-----------CCHHHHHHHHHCSS--E-EEE
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCC--e-EEE
Confidence 5679999999999999999999998766 4788888999842 12222 1 1222 222333443322 3 999
Q ss_pred cCCcc-cHHHHHhCCeeEEe
Q 002310 795 GDGIN-DAAALASSHIGVAM 813 (937)
Q Consensus 795 GDG~N-Da~AL~~AdVGIam 813 (937)
||+.+ |..+.++|++....
T Consensus 171 gD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 171 GDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp ESSCCCCCCCSSSCSEEEEE
T ss_pred cCCchHhHHHHHHCCCeEEE
Confidence 99999 99999999987554
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.62 E-value=0.066 Score=56.38 Aligned_cols=91 Identities=14% Similarity=0.220 Sum_probs=66.9
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CCCC--ceeEec---cChh--hHHHHHHHHhcCCCEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV---GIPK--DKVLSG---VKPN--EKKRFINELQNDENVVA 792 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~---GI~~--~~v~ar---~~Pe--~K~~iV~~Lq~~G~~Va 792 (937)
-++.|++.++++.|+++|+++.++|.-+...+..+-+.+ |+.. +.+++. -.|+ -=..+.+.+.-....+.
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~~~l 208 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNIL 208 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGEE
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCcccEE
Confidence 468899999999999999999999999988888777644 4642 133322 2332 22445555554556799
Q ss_pred EEcCCcccHHHHHhCCee-EEe
Q 002310 793 MVGDGINDAAALASSHIG-VAM 813 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdVG-Iam 813 (937)
||||..+|..+-++|++- |.+
T Consensus 209 ~VgDs~~di~aA~~aG~~~i~v 230 (261)
T 1yns_A 209 FLTDVTREASAAEEADVHVAVV 230 (261)
T ss_dssp EEESCHHHHHHHHHTTCEEEEE
T ss_pred EEcCCHHHHHHHHHCCCEEEEE
Confidence 999999999999999974 344
|
| >2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C | Back alignment and structure |
|---|
Probab=94.35 E-value=0.0074 Score=66.93 Aligned_cols=15 Identities=7% Similarity=-0.234 Sum_probs=0.0
Q ss_pred cccccccccccCCcC
Q 002310 63 HIRCRLECMSSCAAS 77 (937)
Q Consensus 63 ~~~~~~~~~~~~~~~ 77 (937)
+-++|-.+=++.+++
T Consensus 265 ~~~~~~~~~~~~s~~ 279 (358)
T 2pk2_A 265 KKTKADDRGTDEKTS 279 (358)
T ss_dssp ---------------
T ss_pred cCCcccCcccccccc
Confidence 344555555555444
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.25 E-value=0.072 Score=55.25 Aligned_cols=101 Identities=17% Similarity=0.155 Sum_probs=70.4
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeE-e----ccC--hhhHHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVL-S----GVK--PNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~-a----r~~--Pe~K~~iV~~Lq~~G~~Vam 793 (937)
.++.|++.+.++.|++.|+++.++|.... +..+-+.+|+... .++ + +.. |+-=....+.+.-....+.|
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~ 171 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIG 171 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEEE
Confidence 46789999999999999999999997543 4567788898421 111 1 123 33334555566555678999
Q ss_pred EcCCcccHHHHHhCCe-eEEeCCChHHHHhhcCEEEe
Q 002310 794 VGDGINDAAALASSHI-GVAMGGGVGAASEVASVVLM 829 (937)
Q Consensus 794 vGDG~NDa~AL~~AdV-GIamg~gt~~a~~aADivL~ 829 (937)
|||..+|..|-++|++ .|++..|. ..+|.++-
T Consensus 172 VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~~ 204 (243)
T 4g9b_A 172 IEDAQAGIDAINASGMRSVGIGAGL----TGAQLLLP 204 (243)
T ss_dssp EESSHHHHHHHHHHTCEEEEESTTC----CSCSEEES
T ss_pred EcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhcC
Confidence 9999999999999986 34555442 24676653
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.18 E-value=0.066 Score=54.74 Aligned_cols=48 Identities=19% Similarity=0.174 Sum_probs=33.0
Q ss_pred HHHhcCCCEEEEEcCC-cccHHHHHhCCeeEEe---CCCh-HHHH---hhcCEEEe
Q 002310 782 NELQNDENVVAMVGDG-INDAAALASSHIGVAM---GGGV-GAAS---EVASVVLM 829 (937)
Q Consensus 782 ~~Lq~~G~~VamvGDG-~NDa~AL~~AdVGIam---g~gt-~~a~---~aADivL~ 829 (937)
+.+.-....++|+||+ .||..|++.|++++++ |.+. +..+ ..+|.++.
T Consensus 187 ~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 187 NKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp HHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred HHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 3333334579999999 6999999999999655 4332 2222 36888873
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.91 E-value=0.44 Score=49.33 Aligned_cols=110 Identities=15% Similarity=0.156 Sum_probs=63.4
Q ss_pred ChhHHHHHHHHHhC-CCeEEEEcCCCHHH-------------HHHHHHHcCCCCceeEecc-ChhhHHHHHHHHhcCCCE
Q 002310 726 RDDAAHVVNSLSSQ-GIGVYMLSGDKKNS-------------AEYVASLVGIPKDKVLSGV-KPNEKKRFINELQNDENV 790 (937)
Q Consensus 726 r~~a~e~I~~L~~a-GI~v~mlTGD~~~t-------------A~~iA~~~GI~~~~v~ar~-~Pe~K~~iV~~Lq~~G~~ 790 (937)
.+++.+.++.|++. |+++ ++|+..... ...+....+.. .+..+. .|+-=..+.+.+.-....
T Consensus 133 ~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~kpk~~~~~~~~~~lgi~~~~ 209 (271)
T 2x4d_A 133 YQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSGLMLDVGPYMKALEYACGIK--AEVVGKPSPEFFKSALQAIGVEAHQ 209 (271)
T ss_dssp HHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTEEEECHHHHHHHHHHHHTCC--CEEESTTCHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCCcccChhHHHHHHHHHhCCc--eeeccCCCHHHHHHHHHHhCCCcce
Confidence 56788889999988 9998 555433211 11111223332 222211 122222233344333457
Q ss_pred EEEEcCCc-ccHHHHHhCCeeEEeC-CC---hHH-HH--hhcCEEEeCCChhHHHHHH
Q 002310 791 VAMVGDGI-NDAAALASSHIGVAMG-GG---VGA-AS--EVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 791 VamvGDG~-NDa~AL~~AdVGIamg-~g---t~~-a~--~aADivL~~~~l~~l~~~i 840 (937)
|+|+||+. ||..|++.|++++++- .| .+. .. ..+|.++ +++..+...+
T Consensus 210 ~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~--~~~~el~~~l 265 (271)
T 2x4d_A 210 AVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYV--DNLAEAVDLL 265 (271)
T ss_dssp EEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEE--SSHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEe--CCHHHHHHHH
Confidence 99999998 9999999999998762 33 121 11 2378887 4577776554
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=93.79 E-value=0.24 Score=51.86 Aligned_cols=112 Identities=17% Similarity=0.117 Sum_probs=67.2
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHH-------------HHHHHHHcCCCCceeEeccChh--hHHHHHHHHhcC
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNS-------------AEYVASLVGIPKDKVLSGVKPN--EKKRFINELQND 787 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~t-------------A~~iA~~~GI~~~~v~ar~~Pe--~K~~iV~~Lq~~ 787 (937)
..+.+++.+.++.| +.|+++ ++|...... ...+....+.. .....-.|+ -=..+.+.+.-.
T Consensus 136 ~~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~kpk~~~~~~~~~~lgi~ 211 (271)
T 1vjr_A 136 TLTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRK--PDLIAGKPNPLVVDVISEKFGVP 211 (271)
T ss_dssp TCCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCC--CSEECSTTSTHHHHHHHHHHTCC
T ss_pred CcCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCC--CcccCCCCCHHHHHHHHHHhCCC
Confidence 45678999999999 789998 777654321 11222223332 102222332 223334444334
Q ss_pred CCEEEEEcCC-cccHHHHHhCCeeEEeC-C--Ch-HHHHh---hcCEEEeCCChhHHHHHH
Q 002310 788 ENVVAMVGDG-INDAAALASSHIGVAMG-G--GV-GAASE---VASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 788 G~~VamvGDG-~NDa~AL~~AdVGIamg-~--gt-~~a~~---aADivL~~~~l~~l~~~i 840 (937)
...|+||||+ .||..|++.|.++..+- . +. +...+ .+|+++ +++..+..++
T Consensus 212 ~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i--~~l~el~~~l 270 (271)
T 1vjr_A 212 KERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 270 (271)
T ss_dssp GGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred CceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHh
Confidence 4579999999 59999999999998872 2 22 22222 578887 4677776553
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=92.91 E-value=0.038 Score=56.37 Aligned_cols=87 Identities=20% Similarity=0.325 Sum_probs=56.9
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH----HHHHcCCC--C-ce-eEeccChhhHHHHHHHHhcCCCEEEEEcC
Q 002310 725 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEY----VASLVGIP--K-DK-VLSGVKPNEKKRFINELQNDENVVAMVGD 796 (937)
Q Consensus 725 lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~----iA~~~GI~--~-~~-v~ar~~Pe~K~~iV~~Lq~~G~~VamvGD 796 (937)
+.+++.+.++.|++.|+++.++|+-....+.. +.+..+.. . +. .+....|+- ..+.+.+++.|- +.||||
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~~~~~~~~~~~~KP~p-~~~~~~~~~~g~-~l~VGD 166 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQ-NTKSQWLQDKNI-RIFYGD 166 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTC-CCSHHHHHHTTE-EEEEES
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccccccchhhhcCCCCCH-HHHHHHHHHCCC-EEEEEC
Confidence 57899999999999999999999986443322 33333331 0 01 222333321 122334444554 999999
Q ss_pred CcccHHHHHhCCee-EEe
Q 002310 797 GINDAAALASSHIG-VAM 813 (937)
Q Consensus 797 G~NDa~AL~~AdVG-Iam 813 (937)
..+|..+-++|++- |.+
T Consensus 167 s~~Di~aA~~aG~~~i~v 184 (211)
T 2b82_A 167 SDNDITAARDVGARGIRI 184 (211)
T ss_dssp SHHHHHHHHHTTCEEEEC
T ss_pred CHHHHHHHHHCCCeEEEE
Confidence 99999999999985 444
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=91.11 E-value=0.051 Score=56.85 Aligned_cols=50 Identities=22% Similarity=0.300 Sum_probs=41.8
Q ss_pred hHHHHHHHHhcCCCEEEEEcC----CcccHHHHHhCC-eeEEeCCChHHHHhhcC
Q 002310 776 EKKRFINELQNDENVVAMVGD----GINDAAALASSH-IGVAMGGGVGAASEVAS 825 (937)
Q Consensus 776 ~K~~iV~~Lq~~G~~VamvGD----G~NDa~AL~~Ad-VGIamg~gt~~a~~aAD 825 (937)
.|..-++.|.+.-.-|+++|| |.||.+||+.|. +|++|++..+..+..++
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~ 241 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEK 241 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHH
Confidence 788878777765668999999 799999999995 99999988887776544
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=90.96 E-value=0.58 Score=53.77 Aligned_cols=90 Identities=13% Similarity=0.151 Sum_probs=60.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCC------CHHHHHHHHHHcC-CCCceeEec-----cCh--hhHHHHHHHHhcCCC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGD------KKNSAEYVASLVG-IPKDKVLSG-----VKP--NEKKRFINELQNDEN 789 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD------~~~tA~~iA~~~G-I~~~~v~ar-----~~P--e~K~~iV~~Lq~~G~ 789 (937)
++.|++.++++.|++.|+++.++|+- ...........+. .. +.+++. ..| +-=..+.+.+.-...
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~f-d~i~~~~~~~~~KP~p~~~~~~~~~lg~~p~ 178 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHF-DFLIESCQVGMVKPEPQIYKFLLDTLKASPS 178 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTS-SEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhhe-eEEEeccccCCCCCCHHHHHHHHHHcCCChh
Confidence 67899999999999999999999985 2222222211121 12 233321 233 333455555555556
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeC
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMG 814 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg 814 (937)
.+.||||..||..+.++|++....-
T Consensus 179 ~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 179 EVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp GEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred HEEEECCcHHHHHHHHHcCCEEEEE
Confidence 7999999999999999999977663
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=90.88 E-value=0.0043 Score=62.26 Aligned_cols=70 Identities=14% Similarity=0.186 Sum_probs=53.1
Q ss_pred CcCChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCccc
Q 002310 723 DRIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGIND 800 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~a-GI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~ND 800 (937)
-++.|++.++++.|++. |+++.++|+-....+..+.+.+|+ -+.+++ ++ ..+.+.-....+.||||..+|
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl-f~~i~~---~~----~~~~~~~~~~~~~~vgDs~~d 142 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW-VEQHLG---PQ----FVERIILTRDKTVVLGDLLID 142 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH-HHHHHC---HH----HHTTEEECSCGGGBCCSEEEE
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc-hhhhcC---HH----HHHHcCCCcccEEEECCchhh
Confidence 36789999999999999 999999999988888888888887 223332 21 333333334568899999999
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=90.36 E-value=0.43 Score=49.96 Aligned_cols=83 Identities=16% Similarity=0.219 Sum_probs=61.3
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc--C-------------CCCceeEe----ccChh--hHHHHH
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV--G-------------IPKDKVLS----GVKPN--EKKRFI 781 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~--G-------------I~~~~v~a----r~~Pe--~K~~iV 781 (937)
-++.|++.++++. |+++.++|.-+...+..+-+.+ | +. .+|. +..|+ -=..+.
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~--~~f~~~~~g~KP~p~~~~~a~ 197 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYID--GYFDINTSGKKTETQSYANIL 197 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCC--EEECHHHHCCTTCHHHHHHHH
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcc--eEEeeeccCCCCCHHHHHHHH
Confidence 3678999988888 9999999999999888887777 5 43 3332 23443 223444
Q ss_pred HHHhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 002310 782 NELQNDENVVAMVGDGINDAAALASSHIGV 811 (937)
Q Consensus 782 ~~Lq~~G~~VamvGDG~NDa~AL~~AdVGI 811 (937)
+.+.-....++||||..+|+.+-++|.+-.
T Consensus 198 ~~lg~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 198 RDIGAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp HHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred HHcCCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 555544567999999999999999998753
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=89.96 E-value=0.33 Score=54.85 Aligned_cols=86 Identities=15% Similarity=0.242 Sum_probs=59.8
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCC------------HHHHHHHHHHcCCCCceeEec-----cChhhHHHHHHHHhcC
Q 002310 725 IRDDAAHVVNSLSSQGIGVYMLSGDK------------KNSAEYVASLVGIPKDKVLSG-----VKPNEKKRFINELQND 787 (937)
Q Consensus 725 lr~~a~e~I~~L~~aGI~v~mlTGD~------------~~tA~~iA~~~GI~~~~v~ar-----~~Pe~K~~iV~~Lq~~ 787 (937)
+-|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.-+.+++. -.|.- .-+...+++.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~fd~i~~~~~~~~~KP~p-~~~~~a~~~l 166 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVS-GMWDHLQEQA 166 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSCCEEEEECSSSTTSTTSS-HHHHHHHHHS
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCCCH-HHHHHHHHHh
Confidence 67999999999999999999999955 233778888999854444442 12322 1223333333
Q ss_pred C-------CEEEEEcCCc-----------------ccHHHHHhCCeeE
Q 002310 788 E-------NVVAMVGDGI-----------------NDAAALASSHIGV 811 (937)
Q Consensus 788 G-------~~VamvGDG~-----------------NDa~AL~~AdVGI 811 (937)
| ..+.||||.. +|..+-+.|.+-.
T Consensus 167 ~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f 214 (416)
T 3zvl_A 167 NEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPF 214 (416)
T ss_dssp STTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCE
T ss_pred CCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcc
Confidence 3 4689999997 6877777776654
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=88.45 E-value=0.2 Score=51.79 Aligned_cols=108 Identities=11% Similarity=0.115 Sum_probs=65.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH-------------HHHHcCCCCceeEeccChhhHHHHHHHH-hcCC-
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEY-------------VASLVGIPKDKVLSGVKPNEKKRFINEL-QNDE- 788 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~-------------iA~~~GI~~~~v~ar~~Pe~K~~iV~~L-q~~G- 788 (937)
.+.+++.+.++.|+ .|+++ ++|+........ +....+.. .+. .-.| |...++.+ ++.|
T Consensus 122 ~~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~Kp--~~~~~~~~~~~lgi 194 (259)
T 2ho4_A 122 FHYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTK--AMV-VGKP--EKTFFLEALRDADC 194 (259)
T ss_dssp CBHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCC--CEE-CSTT--SHHHHHHHGGGGTC
T ss_pred CCHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCC--ceE-ecCC--CHHHHHHHHHHcCC
Confidence 36789999999999 89999 888765432211 11222322 222 2233 33344433 3333
Q ss_pred --CEEEEEcCCc-ccHHHHHhCCeeEE-eCCC---h-HHH--HhhcCEEEeCCChhHHHHHH
Q 002310 789 --NVVAMVGDGI-NDAAALASSHIGVA-MGGG---V-GAA--SEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 789 --~~VamvGDG~-NDa~AL~~AdVGIa-mg~g---t-~~a--~~aADivL~~~~l~~l~~~i 840 (937)
..++||||+. ||..|.+.|++-.. +..| . +.. ...+|.++ +++..+..++
T Consensus 195 ~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~--~~l~~l~~~l 254 (259)
T 2ho4_A 195 APEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTC--ESFPHAVDHI 254 (259)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEE--SCHHHHHHHH
T ss_pred ChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEE--CCHHHHHHHH
Confidence 4699999998 99999999997543 3333 1 111 23478776 5677776654
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=88.42 E-value=0.84 Score=48.86 Aligned_cols=112 Identities=16% Similarity=0.111 Sum_probs=67.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHH--------------HHHHHHHHcCCCCceeEeccChh--hHHHHHHHHhcC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKN--------------SAEYVASLVGIPKDKVLSGVKPN--EKKRFINELQND 787 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~--------------tA~~iA~~~GI~~~~v~ar~~Pe--~K~~iV~~Lq~~ 787 (937)
.+.+++.++++.|++.|+ +.++|..... -...+....+.. .+ ..-.|. -=..+.+.+.-.
T Consensus 156 ~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~--~~-~~~KP~~~~~~~~~~~lgi~ 231 (306)
T 2oyc_A 156 FSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQ--AL-VVGKPSPYMFECITENFSID 231 (306)
T ss_dssp CCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCC--CE-ECSTTSTHHHHHHHHHSCCC
T ss_pred CCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCC--ce-eeCCCCHHHHHHHHHHcCCC
Confidence 456899999999999999 7788765432 122333333433 22 222333 222223333222
Q ss_pred CCEEEEEcCCc-ccHHHHHhCCeeEEe---CCCh--HHHH--------hhcCEEEeCCChhHHHHHHH
Q 002310 788 ENVVAMVGDGI-NDAAALASSHIGVAM---GGGV--GAAS--------EVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 788 G~~VamvGDG~-NDa~AL~~AdVGIam---g~gt--~~a~--------~aADivL~~~~l~~l~~~i~ 841 (937)
...++||||+. ||..|.+.|++...+ |... +... ..+|+++ +++..+...++
T Consensus 232 ~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi--~~l~el~~~l~ 297 (306)
T 2oyc_A 232 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYV--ESIADLTEGLE 297 (306)
T ss_dssp GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEE--SSGGGGGGGC-
T ss_pred hHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEE--CCHHHHHHHHH
Confidence 35799999996 999999999998776 2222 2221 3578887 45777665543
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=85.12 E-value=3.3 Score=43.21 Aligned_cols=89 Identities=11% Similarity=0.122 Sum_probs=67.2
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC---Cc---------------
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP---KD--------------- 766 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~---~~--------------- 766 (937)
..+++..||+++- -...+-+.+.++|+++++.|+++++.||-....+..+.+++|++ ..
T Consensus 6 kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~ 82 (279)
T 4dw8_A 6 KLIVLDLDGTLTN---SKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESK 82 (279)
T ss_dssp CEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTC
T ss_pred eEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCC
Confidence 4566777887652 23467899999999999999999999999999999999999973 11
Q ss_pred -eeEe-ccChhhHHHHHHHHhcCCCEEEEEcC
Q 002310 767 -KVLS-GVKPNEKKRFINELQNDENVVAMVGD 796 (937)
Q Consensus 767 -~v~a-r~~Pe~K~~iV~~Lq~~G~~VamvGD 796 (937)
.++. .+.++.-.++++.+++.+..+....+
T Consensus 83 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 114 (279)
T 4dw8_A 83 EMMYENVLPNEVVPVLYECARTNHLSILTYDG 114 (279)
T ss_dssp CEEEECCCCGGGHHHHHHHHHHTTCEEEEEET
T ss_pred eEEEEecCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 1222 24566778888999888776555443
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=85.05 E-value=1.4 Score=45.76 Aligned_cols=103 Identities=19% Similarity=0.177 Sum_probs=63.0
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHH-------------HHHHHHHHcCCCCceeEeccChh--hHHHHHHHHhc
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKN-------------SAEYVASLVGIPKDKVLSGVKPN--EKKRFINELQN 786 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~-------------tA~~iA~~~GI~~~~v~ar~~Pe--~K~~iV~~Lq~ 786 (937)
...+.+++.++++.|+ .|+++ ++|..... -...+...++.. .+ ..-.|+ -=..+.+.+.-
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~--~~-~~~KP~p~~~~~~~~~~~~ 198 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTK--PV-YIGKPKAIIMERAIAHLGV 198 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCC--CE-ECSTTSHHHHHHHHHHHCS
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCC--cc-ccCCCCHHHHHHHHHHcCC
Confidence 4567899999999997 89997 77765441 122233333332 22 123443 33344455544
Q ss_pred CCCEEEEEcCC-cccHHHHHhCCee-EEe--CCChH-HHHh---hcCEEEe
Q 002310 787 DENVVAMVGDG-INDAAALASSHIG-VAM--GGGVG-AASE---VASVVLM 829 (937)
Q Consensus 787 ~G~~VamvGDG-~NDa~AL~~AdVG-Iam--g~gt~-~a~~---aADivL~ 829 (937)
....+.||||. .||..+.++|++. |.+ |.+.. ..++ .+|+++.
T Consensus 199 ~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~ 249 (264)
T 1yv9_A 199 EKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVD 249 (264)
T ss_dssp CGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEES
T ss_pred CHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEe
Confidence 44679999999 6999999999987 333 43221 1122 5888873
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=84.25 E-value=2.6 Score=44.44 Aligned_cols=88 Identities=11% Similarity=0.193 Sum_probs=64.9
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------ee--------E
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------KV--------L 769 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~-------~v--------~ 769 (937)
..+++..||+++- -+..+.+...+++++|++.|+++.++||-+...+..+.+++|++.. .+ +
T Consensus 5 kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~~~ 81 (288)
T 1nrw_A 5 KLIAIDLDGTLLN---SKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRLYH 81 (288)
T ss_dssp CEEEEECCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCEEE
T ss_pred EEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCcEEE
Confidence 4567778888753 2445788899999999999999999999999999999999887531 11 1
Q ss_pred ec-cChhhHHHHHHHHhcCCCEEEEEc
Q 002310 770 SG-VKPNEKKRFINELQNDENVVAMVG 795 (937)
Q Consensus 770 ar-~~Pe~K~~iV~~Lq~~G~~VamvG 795 (937)
.. +.++.-.++++.+++.|..+.+.+
T Consensus 82 ~~~~~~~~~~~i~~~l~~~~~~~~~~~ 108 (288)
T 1nrw_A 82 HETIDKKRAYDILSWLESENYYYEVFT 108 (288)
T ss_dssp ECCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EeeCCHHHHHHHHHHHHHCCcEEEEEe
Confidence 11 345555678888888876555543
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=83.76 E-value=0.014 Score=58.63 Aligned_cols=78 Identities=12% Similarity=0.094 Sum_probs=53.9
Q ss_pred cCChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCccc--
Q 002310 724 RIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGIND-- 800 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~a-GI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~ND-- 800 (937)
++.|++.++++.|++. |+++.++|+-....+..+.+..|+.. ..|. ....+.+.-....+.||||..+|
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~-~~f~-------~~~~~~l~~~~~~~~~vgDs~~dD~ 146 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVE-KYFG-------PDFLEQIVLTRDKTVVSADLLIDDR 146 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHH-HHHC-------GGGGGGEEECSCSTTSCCSEEEESC
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHH-Hhch-------HHHHHHhccCCccEEEECcccccCC
Confidence 6789999999999999 99999999988777777777777641 0221 11222222234567899999998
Q ss_pred --HHHHH-hCCe
Q 002310 801 --AAALA-SSHI 809 (937)
Q Consensus 801 --a~AL~-~AdV 809 (937)
..+-+ +|++
T Consensus 147 ~~~~~a~~~aG~ 158 (197)
T 1q92_A 147 PDITGAEPTPSW 158 (197)
T ss_dssp SCCCCSCSSCSS
T ss_pred chhhhcccCCCc
Confidence 64444 4444
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=83.43 E-value=3.7 Score=42.74 Aligned_cols=86 Identities=15% Similarity=0.049 Sum_probs=63.1
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-c--------------e-eE
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-D--------------K-VL 769 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~-~--------------~-v~ 769 (937)
.+++..||+++- -...+-+.+.++|++ ++.|+++++.||-....+..+.+++|++. . . ++
T Consensus 4 li~~DlDGTLl~---~~~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~i~ 79 (268)
T 1nf2_A 4 VFVFDLDGTLLN---DNLEISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVIL 79 (268)
T ss_dssp EEEEECCCCCSC---TTSCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEE
T ss_pred EEEEeCCCcCCC---CCCccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCCEEE
Confidence 566677887653 233577889999999 99999999999999999999999999853 1 1 12
Q ss_pred e-ccChhhHHHHHHHHhcCCCEEEEEc
Q 002310 770 S-GVKPNEKKRFINELQNDENVVAMVG 795 (937)
Q Consensus 770 a-r~~Pe~K~~iV~~Lq~~G~~VamvG 795 (937)
. .+.+++-.++++.+++.+..+...+
T Consensus 80 ~~~l~~~~~~~i~~~~~~~~~~~~~~~ 106 (268)
T 1nf2_A 80 NEKIPPEVAKDIIEYIKPLNVHWQAYI 106 (268)
T ss_dssp ECCBCHHHHHHHHHHHGGGCCCEEEEC
T ss_pred ecCCCHHHHHHHHHHHHhCCCEEEEEE
Confidence 2 2556777788888887654444333
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=82.83 E-value=3.5 Score=39.92 Aligned_cols=99 Identities=11% Similarity=0.126 Sum_probs=61.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCC---CH---HHHHHHHHHcCCCC--ceeEeccChhhHHHHHHHHhcCCCEEEEEc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGD---KK---NSAEYVASLVGIPK--DKVLSGVKPNEKKRFINELQNDENVVAMVG 795 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD---~~---~tA~~iA~~~GI~~--~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvG 795 (937)
++.|++.++++.|++. +++.++|+- .. .+...+.+..+... +.+++.-. .| + ..+.|||
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~--~~------l----~~~l~ie 135 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRK--NI------I----LADYLID 135 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCG--GG------B----CCSEEEE
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCc--Ce------e----cccEEec
Confidence 6889999999999984 999999986 21 11233444455421 24444321 11 1 3469999
Q ss_pred CCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHH
Q 002310 796 DGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 796 DG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i 840 (937)
|..+|+. ++|.-.|++..+... ...++.++ +++..+..++
T Consensus 136 Ds~~~i~--~aaG~~i~~~~~~~~-~~~~~~~i--~~~~el~~~l 175 (180)
T 3bwv_A 136 DNPKQLE--IFEGKSIMFTASHNV-YEHRFERV--SGWRDVKNYF 175 (180)
T ss_dssp SCHHHHH--HCSSEEEEECCGGGT-TCCSSEEE--CSHHHHHHHH
T ss_pred CCcchHH--HhCCCeEEeCCCccc-CCCCceec--CCHHHHHHHH
Confidence 9999985 566656666433221 13456655 5677766554
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=81.93 E-value=1.6 Score=48.02 Aligned_cols=97 Identities=12% Similarity=0.209 Sum_probs=68.5
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHcCCC--CceeEeccChhhHH
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDK----KNSAEYVASLVGIP--KDKVLSGVKPNEKK 778 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~----~~tA~~iA~~~GI~--~~~v~ar~~Pe~K~ 778 (937)
..+.+..||++ .-.+.+=|++.++++.|++.|+++.++|+.. ...+..+.+.+|++ .++|+...+|-..
T Consensus 14 ~~~l~D~DGvl----~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~~- 88 (352)
T 3kc2_A 14 IAFAFDIDGVL----FRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKS- 88 (352)
T ss_dssp EEEEECCBTTT----EETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGGG-
T ss_pred CEEEEECCCee----EcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHHH-
Confidence 34555566543 3456677999999999999999999999875 55666777778984 3467765555422
Q ss_pred HHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEE
Q 002310 779 RFINELQNDENVVAMVGDGINDAAALASSHIGVA 812 (937)
Q Consensus 779 ~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIa 812 (937)
. + +.+++|.++|-. .....|+.+++-..
T Consensus 89 -~---~-~~~~~v~viG~~-~l~~~l~~~G~~~v 116 (352)
T 3kc2_A 89 -L---V-NKYSRILAVGTP-SVRGVAEGYGFQDV 116 (352)
T ss_dssp -G---T-TTCSEEEEESST-THHHHHHHHTCSEE
T ss_pred -H---H-hcCCEEEEECCH-HHHHHHHhCCCeEe
Confidence 1 1 256789999965 56677787776655
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=81.53 E-value=1.3 Score=45.77 Aligned_cols=54 Identities=19% Similarity=0.367 Sum_probs=44.8
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~ 764 (937)
.+++..||+++ .+..-+.+.++|++|++.|++++++||-....+..+.+++|+.
T Consensus 4 li~~DlDGTLl-----~~~~~~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 4 LIFLDIDKTLI-----PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp EEEECCSTTTC-----TTSCSGGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred EEEEeCCCCcc-----CCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 45666788876 3433345999999999999999999999999999999999984
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=80.19 E-value=0.52 Score=46.62 Aligned_cols=86 Identities=9% Similarity=0.110 Sum_probs=64.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChh----hHHHHHHHHhcCC---CEEEEEcC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPN----EKKRFINELQNDE---NVVAMVGD 796 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe----~K~~iV~~Lq~~G---~~VamvGD 796 (937)
.+||++.+.++.|++. +++++.|.-....|..+.+.++... .+..++..+ .|...++.|+.-| ..|.+|||
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~-~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdD 132 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWG-AFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDN 132 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTC-CEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECS
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCC-cEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeC
Confidence 5899999999999998 9999999999999999999999863 222232222 2433455555544 47999999
Q ss_pred CcccHHHHHhCCeeE
Q 002310 797 GINDAAALASSHIGV 811 (937)
Q Consensus 797 G~NDa~AL~~AdVGI 811 (937)
..+|..+=..+.+-|
T Consensus 133 s~~~~~~~~~ngi~i 147 (181)
T 2ght_A 133 SPASYVFHPDNAVPV 147 (181)
T ss_dssp CGGGGTTCTTSBCCC
T ss_pred CHHHhccCcCCEeEe
Confidence 999987655554444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 937 | ||||
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 6e-21 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 5e-19 | |
| d1osda_ | 72 | d.58.17.1 (A:) Mercuric ion binding protein MerP { | 3e-13 | |
| d2b8ea2 | 113 | d.220.1.1 (A:435-547) Cation-transporting ATPase { | 3e-13 | |
| d2aw0a_ | 72 | d.58.17.1 (A:) Menkes copper-transporting ATPase { | 1e-12 | |
| d2ggpb1 | 72 | d.58.17.1 (B:1-72) Copper transporter domain ccc2a | 2e-12 | |
| d2a29a1 | 136 | d.220.1.1 (A:316-451) Potassium-transporting ATPas | 2e-12 | |
| d1kvja_ | 79 | d.58.17.1 (A:) Menkes copper-transporting ATPase { | 7e-12 | |
| d1q8la_ | 84 | d.58.17.1 (A:) Menkes copper-transporting ATPase { | 1e-11 | |
| d1p6ta1 | 72 | d.58.17.1 (A:1-72) Potential copper-translocating | 5e-11 | |
| d2qifa1 | 69 | d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt | 5e-11 | |
| d1mwza_ | 73 | d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, | 6e-11 | |
| d1p6ta2 | 79 | d.58.17.1 (A:73-151) Potential copper-translocatin | 2e-10 | |
| d1cpza_ | 68 | d.58.17.1 (A:) Copper chaperone {Enterococcus hira | 2e-10 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 3e-10 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 4e-10 | |
| d1qupa2 | 72 | d.58.17.1 (A:2-73) Copper chaperone for superoxide | 4e-09 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-07 | |
| d1sb6a_ | 64 | d.58.17.1 (A:) Copper chaperone {Synechocystis sp. | 3e-06 | |
| d1cc8a_ | 72 | d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX | 7e-06 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 8e-06 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-05 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 6e-05 | |
| d1fe0a_ | 66 | d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX | 1e-04 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-04 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 8e-04 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 0.002 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 0.003 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 0.004 |
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 87.5 bits (216), Expect = 6e-21
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 704 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763
+ + V D D +++ A V L GI V M++GD SAE ++ + +
Sbjct: 1 EKVTAVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 60
Query: 764 PKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV 823
V P++K + +LQ E VVA VGDGINDA ALA + +G+A+G G A E
Sbjct: 61 DLVIA--EVLPHQKSEEVKKLQAKE-VVAFVGDGINDAPALAQADLGIAVGSGSDVAVES 117
Query: 824 ASVVLMGNRLSQLLVALE 841
+VL+ + L ++ A++
Sbjct: 118 GDIVLIRDDLRDVVAAIQ 135
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 83.3 bits (205), Expect = 5e-19
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 29/159 (18%)
Query: 712 DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK------ 765
D D R + + GI V M++GD K +A + +GI
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA 67
Query: 766 DKVLSG-----------------------VKPNEKKRFINELQNDENVVAMVGDGINDAA 802
D+ +G V+P+ K + + LQ+ + + AM GDG+NDA
Sbjct: 68 DRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAP 127
Query: 803 ALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841
AL + IG+AMG G A + +VL + S ++ A+E
Sbjct: 128 ALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVE 166
|
| >d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Mercuric ion binding protein MerP species: Ralstonia metallidurans CH34 [TaxId: 266264]
Score = 63.6 bits (155), Expect = 3e-13
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQ 183
++ + L V GMTC C +VK+ + VS V T A+V AK
Sbjct: 1 ATQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVT-FDDAKTSV----- 54
Query: 184 LGEALAKHLTSCGFKSSLR 202
+ L K G+ SS++
Sbjct: 55 --QKLTKATADAGYPSSVK 71
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 113 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 64.8 bits (157), Expect = 3e-13
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 10/114 (8%)
Query: 612 IHPL--SETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAI 669
+ PL E E+L+ AA E + HPI +AIV+ A + + G G VA
Sbjct: 5 LVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEK--VEVIAGEGVVA- 61
Query: 670 IEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQ--SLVYVGVDNMLAGLIYV 721
+ VG + GV S E+ +E L + + V V + + G+I V
Sbjct: 62 ---DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAV 112
|
| >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.8 bits (150), Expect = 1e-12
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEA 187
++++ GMTC C S++ ++ +P V S V+L V P E
Sbjct: 5 TVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVE-YDPLLTSP-------ET 56
Query: 188 LAKHLTSCGFKSSLRD 203
L + GF ++L D
Sbjct: 57 LRGAIEDMGFDATLSD 72
|
| >d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper transporter domain ccc2a species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 61.3 bits (149), Expect = 2e-12
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEA 187
+IL V GMTC C ++ L + V+ ++L T V +V ++
Sbjct: 4 VILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQV--TYDNEVTA-------DS 54
Query: 188 LAKHLTSCGFKSSL 201
+ + + CGF +
Sbjct: 55 IKEIIEDCGFDCEI 68
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} Length = 136 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Score = 63.2 bits (153), Expect = 2e-12
Identities = 18/127 (14%), Positives = 45/127 (35%), Gaps = 11/127 (8%)
Query: 611 PIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIE-----EPGSG 665
P + E + A P G++IV A+ +
Sbjct: 9 PAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 68
Query: 666 TVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMN------QSLVYVGVDNMLAGLI 719
+ I++R + G++D +R H +++ ++ + + V + + G+I
Sbjct: 69 SGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVI 128
Query: 720 YVEDRIR 726
++D ++
Sbjct: 129 ALKDIVK 135
|
| >d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.8 bits (145), Expect = 7e-12
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 8/76 (10%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEA 187
+ + V GMTC C ++++ + V V+L + A + P +
Sbjct: 10 VTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATII-YDPKLQTP-------KT 61
Query: 188 LAKHLTSCGFKSSLRD 203
L + + GF + + +
Sbjct: 62 LQEAIDDMGFDAVIHN 77
|
| >d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.2 bits (143), Expect = 1e-11
Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGE 186
V+ + V GMTC C ++++ + V V+L + A + + E
Sbjct: 10 VLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISV--------E 61
Query: 187 ALAKHLTSCGFKSSLRD 203
+ K + + GF + ++
Sbjct: 62 EMKKQIEAMGFPAFVKK 78
|
| >d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Score = 57.1 bits (138), Expect = 5e-11
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEA 187
I + V GMTC CAA +++ L+ P V+ A+VNL TET V A+ A
Sbjct: 8 IAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVI-YDPAETGT-------AA 59
Query: 188 LAKHLTSCGFK 198
+ + + G+
Sbjct: 60 IQEKIEKLGYH 70
|
| >d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Bacillus subtilis, CopZ [TaxId: 1423]
Score = 56.7 bits (137), Expect = 5e-11
Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 8/73 (10%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEA 187
L V GM+C C +V+ + VS+ VNL V KV +
Sbjct: 4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVS-FDADKVSV-------KD 55
Query: 188 LAKHLTSCGFKSS 200
+A + G+ +
Sbjct: 56 IADAIEDQGYDVA 68
|
| >d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Metal ion-transporting ATPase ZntA, N-terminal domain species: Escherichia coli [TaxId: 562]
Score = 57.1 bits (138), Expect = 6e-11
Identities = 15/75 (20%), Positives = 23/75 (30%), Gaps = 10/75 (13%)
Query: 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQ 183
S V GM C CA V+ + V+ V TE +V +
Sbjct: 1 SGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVV----------DADND 50
Query: 184 LGEALAKHLTSCGFK 198
+ + L G+
Sbjct: 51 IRAQVESALQKAGYS 65
|
| >d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Score = 56.0 bits (135), Expect = 2e-10
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEA 187
D+ GMTC CA +++ L V++A VN ET V + +
Sbjct: 4 AEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVE-YNPKEASV-------SD 55
Query: 188 LAKHLTSCGFKSSLRD 203
L + + G+K L+
Sbjct: 56 LKEAVDKLGYKLKLKG 71
|
| >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Enterococcus hirae [TaxId: 1354]
Score = 55.2 bits (133), Expect = 2e-10
Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 8/72 (11%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALA 189
V GM+C C A ++ + V V L E A+V +A V +
Sbjct: 4 FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVK-FDEANVQA-------TEIC 55
Query: 190 KHLTSCGFKSSL 201
+ + G+++ +
Sbjct: 56 QAINELGYQAEV 67
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 56.3 bits (135), Expect = 3e-10
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 16/108 (14%)
Query: 372 DAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRST---VDESSFTGEPLPVTKIP 428
+ S+ + + GD + V GD++PAD + + +ST VD+S TGE + V K
Sbjct: 8 ADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHT 67
Query: 429 ESE-------------VAAGSINLNGTLTVEVRRPGGETAMGDIVRLV 463
E + +G+ G V G T +G I +
Sbjct: 68 EPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 58.8 bits (141), Expect = 4e-10
Identities = 28/220 (12%), Positives = 57/220 (25%), Gaps = 28/220 (12%)
Query: 655 DGTFI---------EEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQS 705
DGT + ++D V T+ G E++ +
Sbjct: 12 DGTITMNDNIINIMKTFAPPEWMALKDG-VLSKTLSIKEGVGRMFGLLPSSLKEEITSFV 70
Query: 706 LVYVGVDNMLAGLI-----------YVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSA 754
L + + + + ++ + +
Sbjct: 71 LEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI---VEKDRIYCNHASFDN 127
Query: 755 EYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG 814
+Y+ S K I+EL + M+GD + D A S + A
Sbjct: 128 DYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD 187
Query: 815 GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNL 854
+ E L ++ +E +K V++ L
Sbjct: 188 YLLNECREQNLNHLPYQDFYEIRKEIE----NVKEVQEWL 223
|
| >d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone for superoxide dismutase, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.7 bits (124), Expect = 4e-09
Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 134 GMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLT 193
M C C +K L++ P ++S + ++ + V ++ V P + L
Sbjct: 13 PMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSV----ESSVAP-------STIINTLR 61
Query: 194 SCGFKSSLR 202
+CG + +R
Sbjct: 62 NCGKDAIIR 70
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 52.5 bits (125), Expect = 1e-07
Identities = 30/179 (16%), Positives = 50/179 (27%), Gaps = 48/179 (26%)
Query: 709 VGVDNMLAGLIYVED--RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG---- 762
+ G IY E R D+ ++N L G + + +G +G
Sbjct: 198 IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY 257
Query: 763 --------------------------------IPKDKVLSGVKPNEKKRFINELQNDENV 790
+ E + +++
Sbjct: 258 FEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDD 317
Query: 791 VAMVGDGINDAAALASSH---IGVAMG-GGVGAASEV----ASVVLMGNRLSQLLVALE 841
V +VGD + D + IG G G AA E+ A V+ N L +L L+
Sbjct: 318 VFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVLD 374
|
| >d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]
Score = 43.4 bits (102), Expect = 3e-06
Identities = 10/51 (19%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIV-WPVSKAKVI 177
I L V + C CA +V + ++++ ++ V+LT++ + + + ++
Sbjct: 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLR 53
|
| >d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: ATX1 metallochaperone protein (ATOX1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.5 bits (100), Expect = 7e-06
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 134 GMTCGGCAASVKRILES-QPQVSSASVNLTTETAIV-WPVSKAKVI 177
MTC GC+ +V ++L +P VS ++L + V + ++
Sbjct: 11 VMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFIL 56
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 45.1 bits (106), Expect = 8e-06
Identities = 21/130 (16%), Positives = 37/130 (28%), Gaps = 6/130 (4%)
Query: 702 MNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV 761
+ ++ + G +RD + L I V +LSG + +
Sbjct: 16 LTDGQLHYDAN----GEAIKSFHVRDGLG--IKMLMDADIQVAVLSGRDSPILRRRIADL 69
Query: 762 GIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAAS 821
GI + K + + A +GD D A A+ A+
Sbjct: 70 GIKLFFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVK 129
Query: 822 EVASVVLMGN 831
VL +
Sbjct: 130 NAVDHVLSTH 139
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.9 bits (105), Expect = 1e-05
Identities = 36/204 (17%), Positives = 61/204 (29%), Gaps = 26/204 (12%)
Query: 655 DGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNM 714
D T I E G +A I + +V + G E L+ S V
Sbjct: 18 DSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQV----- 72
Query: 715 LAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 774
+ + +V+ L + + V+++SG ++ E+VAS + IP V +
Sbjct: 73 QRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLK 132
Query: 775 NEKKRFINELQNDENVV---------------------AMVGDGINDAAALASSHIGVAM 813
+ M+GDG D A + +
Sbjct: 133 FYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGF 192
Query: 814 GGGVGAASEVASVVLMGNRLSQLL 837
GG V + +LL
Sbjct: 193 GGNVIRQQVKDNAKWYITDFVELL 216
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 42.9 bits (100), Expect = 6e-05
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 774 PNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRL 833
+ K++ + ++ V GD ND L+ +H G+ E +
Sbjct: 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHT-Y 189
Query: 834 SQLLVAL-ELSRLTM 847
L + S ++
Sbjct: 190 EDLKREFLKASSRSL 204
|
| >d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: ATX1 metallochaperone protein (ATOX1) species: Human (Homo sapiens), HAH1 [TaxId: 9606]
Score = 38.7 bits (90), Expect = 1e-04
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 12/68 (17%)
Query: 134 GMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLT 193
MTCGGCA +V R+L ++L + + +++ + L L
Sbjct: 8 DMTCGGCAEAVSRVLNKLG-GVKYDIDLPNKKVCI----ESEHSM-------DTLLATLK 55
Query: 194 SCGFKSSL 201
G S
Sbjct: 56 KTGKTVSY 63
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 41.3 bits (95), Expect = 2e-04
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 774 PNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRL 833
++ + VGDG ND + + + +A E A + + L
Sbjct: 144 GEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDL 202
Query: 834 SQLLVALE 841
++L ++
Sbjct: 203 REILKYIK 210
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.8 bits (97), Expect = 2e-04
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 777 KKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQL 836
K+ E A VGD +ND + L ++ GVAMG +A V + N +
Sbjct: 219 KRLAKQLNIPLEETAA-VGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGV 277
Query: 837 LVALE 841
++
Sbjct: 278 AHMMK 282
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 39.9 bits (92), Expect = 8e-04
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 791 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841
+ +GD ND A + + +GVA+ + + EVA+ V N + A+E
Sbjct: 216 IMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 38.5 bits (88), Expect = 0.002
Identities = 35/264 (13%), Positives = 68/264 (25%), Gaps = 47/264 (17%)
Query: 578 VVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGK 637
+ D GT+T ++ + E ++ A + + G
Sbjct: 5 ISIDIDGTITYPNRMIHEKAL--------------------EAIRRAESLGIPIMLVTGN 44
Query: 638 AIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVE 697
+ A S ED + +D E
Sbjct: 45 TVQFAEAASILIGTSGPVVA-------------EDGGAISYKKKRIFLASMDEEWILWNE 91
Query: 698 MEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYV 757
+ + + + AGL+ + + I + + + + +++ D +
Sbjct: 92 IRKRFPNARTSYTMPDRRAGLVIMRETINVETVREII----NELNLNLVAVDSGFAIHVK 147
Query: 758 ASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGV 817
+ K + ++ L VA VGDG ND A VA+
Sbjct: 148 KPWI----------NKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAP 197
Query: 818 GAASEVASVVLMGNRLSQLLVALE 841
E A V A+
Sbjct: 198 KILKENADYVTKKEYGEGGAEAIY 221
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 38.4 bits (88), Expect = 0.003
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 791 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGN 831
V +VGD ND A L++ A+ +A A VL +
Sbjct: 226 VLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVS 266
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 37.7 bits (86), Expect = 0.004
Identities = 6/51 (11%), Positives = 14/51 (27%)
Query: 791 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841
+ ++GD ND V+ V + ++ +
Sbjct: 170 ILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 220
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 937 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.97 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.97 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.86 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.62 | |
| d2aw0a_ | 72 | Menkes copper-transporting ATPase {Human (Homo sap | 99.5 | |
| d1cpza_ | 68 | Copper chaperone {Enterococcus hirae [TaxId: 1354] | 99.49 | |
| d1osda_ | 72 | Mercuric ion binding protein MerP {Ralstonia metal | 99.48 | |
| d2ggpb1 | 72 | Copper transporter domain ccc2a {Baker's yeast (Sa | 99.47 | |
| d1q8la_ | 84 | Menkes copper-transporting ATPase {Human (Homo sap | 99.47 | |
| d1kvja_ | 79 | Menkes copper-transporting ATPase {Human (Homo sap | 99.47 | |
| d2qifa1 | 69 | Copper chaperone {Bacillus subtilis, CopZ [TaxId: | 99.46 | |
| d1p6ta1 | 72 | Potential copper-translocating P-type ATPase CopA | 99.44 | |
| d1p6ta2 | 79 | Potential copper-translocating P-type ATPase CopA | 99.44 | |
| d1mwza_ | 73 | Metal ion-transporting ATPase ZntA, N-terminal dom | 99.34 | |
| d1sb6a_ | 64 | Copper chaperone {Synechocystis sp. pcc 6803, Scat | 99.28 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.25 | |
| d1qupa2 | 72 | Copper chaperone for superoxide dismutase, N-termi | 99.19 | |
| d1fe0a_ | 66 | ATX1 metallochaperone protein (ATOX1) {Human (Homo | 99.18 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 99.12 | |
| d1cc8a_ | 72 | ATX1 metallochaperone protein (ATOX1) {Baker's yea | 99.11 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.11 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.07 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.05 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.0 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.97 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.79 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.76 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.75 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.74 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.72 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 98.62 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.54 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.52 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.5 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.48 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.22 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.19 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.8 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.7 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.69 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.56 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 97.46 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.39 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.26 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.22 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.1 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.1 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.83 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.66 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.66 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.56 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.55 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.4 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.9 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.67 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.08 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 94.93 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 94.71 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 94.69 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.64 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.57 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.02 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 94.0 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 93.44 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 93.05 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 92.7 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 91.56 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 91.18 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 89.11 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 88.64 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 87.3 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 86.25 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 86.25 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=3.2e-32 Score=269.17 Aligned_cols=123 Identities=32% Similarity=0.516 Sum_probs=118.3
Q ss_pred ecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-----------------------------ceeEec
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-----------------------------DKVLSG 771 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~-----------------------------~~v~ar 771 (937)
.-||+|++++++|+.||++||+|+|+|||+..||.++|+++||.. ..+|+|
T Consensus 17 ~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 96 (168)
T d1wpga2 17 QLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFAR 96 (168)
T ss_dssp CECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEES
T ss_pred ecCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhc
Confidence 349999999999999999999999999999999999999999942 169999
Q ss_pred cChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002310 772 VKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 772 ~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~ 843 (937)
++|+||..+|+.||+.|++|+|+|||+||+|||++|||||+|++|+++|+++|||+|++++|+.|+++|+||
T Consensus 97 ~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 97 VEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.97 E-value=3.1e-31 Score=251.74 Aligned_cols=131 Identities=34% Similarity=0.493 Sum_probs=115.6
Q ss_pred EEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcC
Q 002310 708 YVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND 787 (937)
Q Consensus 708 ~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~ 787 (937)
++..|++..+.++++|++|++++++|+.||++||+++|+|||++.+|.++|++|||+ .+|++++|++|..+|+.+|+.
T Consensus 5 ~~~~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~--~v~~~~~p~~k~~~v~~~q~~ 82 (135)
T d2b8ea1 5 AVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVLPHQKSEEVKKLQAK 82 (135)
T ss_dssp EEEEECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCHHHHHHHHHHHTTT
T ss_pred EEEECCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh--hhccccchhHHHHHHHHHHcC
Confidence 455566666789999999999999999999999999999999999999999999997 899999999999999999875
Q ss_pred CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 788 ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 788 G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
++|+|+|||.||+|||++|||||+|++++++++++||++|++++|+.|+.+|+
T Consensus 83 -~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 83 -EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred -CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 58999999999999999999999999999999999999999999999999874
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.86 E-value=2.8e-22 Score=183.30 Aligned_cols=98 Identities=26% Similarity=0.334 Sum_probs=86.6
Q ss_pred eEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecc---eeeeeccccCCCcccccCCC-----------
Q 002310 364 KARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR---STVDESSFTGEPLPVTKIPE----------- 429 (937)
Q Consensus 364 ~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~---~~VDeS~LTGEs~pv~K~~g----------- 429 (937)
.++|+|++. ...++|++++|+|||+|.|++||+|||||+|++++ +.||||+|||||.|+.|.++
T Consensus 2 ~~kV~R~g~--~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~ 79 (115)
T d1wpga1 2 MGKVYRADR--KSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQD 79 (115)
T ss_dssp EEEEEBSSC--SSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGG
T ss_pred ceEEEECCC--ceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccc
Confidence 578888742 23578999999999999999999999999998643 68999999999999999753
Q ss_pred --CccccceeeecceEEEEEEecCCccHHHHHHHHH
Q 002310 430 --SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLV 463 (937)
Q Consensus 430 --~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v 463 (937)
+.+|+||.+.+|+++++|++||.+|.+|||.+++
T Consensus 80 ~~n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 80 KKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp CTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ccceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 4599999999999999999999999999998764
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.62 E-value=7.8e-17 Score=179.93 Aligned_cols=124 Identities=24% Similarity=0.260 Sum_probs=108.8
Q ss_pred EEEEEEecCcCC--hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--------------------------
Q 002310 715 LAGLIYVEDRIR--DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------------------- 766 (937)
Q Consensus 715 ~lG~i~l~D~lr--~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~-------------------------- 766 (937)
..|++..+|++| ++++++|+.||++||+++|+|||+..+|+.+++++||...
T Consensus 204 ~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~ 283 (380)
T d1qyia_ 204 KTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLG 283 (380)
T ss_dssp CCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCC
T ss_pred hcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhcccccccc
Confidence 457888899855 5999999999999999999999999999999999998420
Q ss_pred ----------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCC---eeEEeC-CChHHHHh----hcCEEE
Q 002310 767 ----------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSH---IGVAMG-GGVGAASE----VASVVL 828 (937)
Q Consensus 767 ----------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~Ad---VGIamg-~gt~~a~~----aADivL 828 (937)
..++|.+|++|..+++.++..++.|+|||||+||++|+++|| |||+|| .|++.+++ .||+|+
T Consensus 284 KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii 363 (380)
T d1qyia_ 284 KPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI 363 (380)
T ss_dssp TTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE
T ss_pred CCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEE
Confidence 245788999999999999999999999999999999999999 999999 77776655 799999
Q ss_pred eCCChhHHHHHH
Q 002310 829 MGNRLSQLLVAL 840 (937)
Q Consensus 829 ~~~~l~~l~~~i 840 (937)
+++..|.+++
T Consensus 364 --~~~~el~~il 373 (380)
T d1qyia_ 364 --NHLGELRGVL 373 (380)
T ss_dssp --SSGGGHHHHH
T ss_pred --CCHHHHHHHH
Confidence 6788776654
|
| >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=1.5e-14 Score=120.82 Aligned_cols=69 Identities=25% Similarity=0.467 Sum_probs=64.9
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (937)
++..|+|+||+|++|+++||++|+++|||.+++||+.++++.|.||+...++ ++|.++|+++||++.+.
T Consensus 3 ~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~--------~~i~~~i~~~Gy~a~l~ 71 (72)
T d2aw0a_ 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSP--------ETLRGAIEDMGFDATLS 71 (72)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTSEEEEC
T ss_pred EEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCH--------HHHHHHHHhhCCCcEeC
Confidence 5688999999999999999999999999999999999999999999998886 89999999999998753
|
| >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Enterococcus hirae [TaxId: 1354]
Probab=99.49 E-value=2e-14 Score=118.44 Aligned_cols=65 Identities=20% Similarity=0.377 Sum_probs=61.6
Q ss_pred EEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 129 ~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
+|.|+||+|++|+++||++|++++||.+++||+.+++++|.||+...++ ++|.++|+++||++.+
T Consensus 3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~--------~~i~~~i~~~Gy~a~v 67 (68)
T d1cpza_ 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQA--------TEICQAINELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHTTSSCEEE
T ss_pred EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCH--------HHHHHHHHhhCCCcEE
Confidence 5899999999999999999999999999999999999999999988876 8999999999998764
|
| >d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Mercuric ion binding protein MerP species: Ralstonia metallidurans CH34 [TaxId: 266264]
Probab=99.48 E-value=2.9e-14 Score=118.87 Aligned_cols=69 Identities=29% Similarity=0.488 Sum_probs=64.9
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (937)
+++.|.|+||+|++|++.||+.|+++|||.+++||+.++++.|.||++..++ ++|.++|+++||++.+.
T Consensus 3 qt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~a~v~ 71 (72)
T d1osda_ 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSV--------QKLTKATADAGYPSSVK 71 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCH--------HHHHHHHHHTTCCCEEC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCH--------HHHHHHHHhcCCCeEeC
Confidence 5688999999999999999999999999999999999999999999988886 89999999999998753
|
| >d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper transporter domain ccc2a species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.47 E-value=2.7e-14 Score=119.11 Aligned_cols=69 Identities=23% Similarity=0.482 Sum_probs=63.3
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (937)
+++.|.|+||+|++|+++||++|++++||.+++||+.++++.|.||++. ++ ++|.++|+++||++.+.+
T Consensus 2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~-~~--------~~i~~~i~~~Gy~a~~~~ 70 (72)
T d2ggpb1 2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEV-TA--------DSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSC-CH--------HHHHHHHHHTTCCCEEEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCC-CH--------HHHHHHHHHhCCCeEEcc
Confidence 4689999999999999999999999999999999999999999999864 44 789999999999987654
|
| >d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=4.1e-14 Score=121.57 Aligned_cols=73 Identities=21% Similarity=0.394 Sum_probs=67.7
Q ss_pred CccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccccc
Q 002310 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (937)
Q Consensus 124 ~~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (937)
...++.|.|+||+|++|+++||++|+++|||.+++||+.+++++|.|++...+. ++|.++|+++||++.+..
T Consensus 7 ~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~--------~~i~~~I~~~Gy~a~~~~ 78 (84)
T d1q8la_ 7 GEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISV--------EEMKKQIEAMGFPAFVKK 78 (84)
T ss_dssp SCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCH--------HHHHHHHHHTTCCEECSC
T ss_pred CCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCH--------HHHHHHHHHhCCccEEcC
Confidence 356789999999999999999999999999999999999999999999998886 899999999999988765
Q ss_pred C
Q 002310 204 M 204 (937)
Q Consensus 204 ~ 204 (937)
.
T Consensus 79 ~ 79 (84)
T d1q8la_ 79 Q 79 (84)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=5.3e-14 Score=119.57 Aligned_cols=73 Identities=19% Similarity=0.381 Sum_probs=67.9
Q ss_pred CccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccccc
Q 002310 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (937)
Q Consensus 124 ~~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (937)
..++++|.|+||+|++|++.||++|+++|||.+++||+.++++.|.||+...++ ++|.++|+++||++.+..
T Consensus 6 ~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~--------~~i~~~i~~~GY~~~~~~ 77 (79)
T d1kvja_ 6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTP--------KTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp TCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCEEEECS
T ss_pred CceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCH--------HHHHHHHHhcCCCcEeCC
Confidence 467899999999999999999999999999999999999999999999988886 899999999999998765
Q ss_pred C
Q 002310 204 M 204 (937)
Q Consensus 204 ~ 204 (937)
+
T Consensus 78 ~ 78 (79)
T d1kvja_ 78 P 78 (79)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Bacillus subtilis, CopZ [TaxId: 1423]
Probab=99.46 E-value=6.4e-14 Score=115.80 Aligned_cols=67 Identities=22% Similarity=0.340 Sum_probs=63.1
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (937)
++.+|.|+||+|++|++.||++|+++|||.+++||+.++++.|.||++..+. ++|.+.|+++||++.
T Consensus 2 ~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~--------~~i~~~i~~~Gy~~~ 68 (69)
T d2qifa1 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSV--------KDIADAIEDQGYDVA 68 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHTTCEEC
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCH--------HHHHHHHHHhCCccc
Confidence 5688999999999999999999999999999999999999999999988776 889999999999863
|
| >d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=99.44 E-value=8.5e-14 Score=116.12 Aligned_cols=67 Identities=33% Similarity=0.509 Sum_probs=63.5
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccc
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (937)
.++++|.|+||+|++|+++||++|+++|||.+++||+.++++.|.||+...+. ++|.++|+++||++
T Consensus 5 ~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~--------~~i~~~i~~~Gy~v 71 (72)
T d1p6ta1 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGT--------AAIQEKIEKLGYHV 71 (72)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCH--------HHHHHHHHHHTCEE
T ss_pred ceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCH--------HHHHHHHHHhCCcc
Confidence 46799999999999999999999999999999999999999999999988876 89999999999975
|
| >d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=99.44 E-value=7.8e-14 Score=118.50 Aligned_cols=71 Identities=28% Similarity=0.449 Sum_probs=66.4
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
+++.|.|+||+|++|+++||+.|++++||.+++||+.++++.|+||+...+. ++|.++|+++||++.+...
T Consensus 2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~~ 72 (79)
T d1p6ta2 2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASV--------SDLKEAVDKLGYKLKLKGE 72 (79)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCCEEESCS
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCH--------HHHHHHHHHHCCceEECCc
Confidence 4689999999999999999999999999999999999999999999988886 8999999999999887554
|
| >d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Metal ion-transporting ATPase ZntA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.34 E-value=9.7e-13 Score=109.78 Aligned_cols=68 Identities=21% Similarity=0.306 Sum_probs=61.4
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (937)
.+.+|.|+||+|++|+++||+.|++++||.+++||+.+++++|.+++.. . ++|.++|+++||++...+
T Consensus 3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~--~--------~~i~~~i~~~GY~v~~~~ 70 (73)
T d1mwza_ 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDI--R--------AQVESALQKAGYSLRDEQ 70 (73)
T ss_dssp CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCC--H--------HHHHHHHHHHTCCCCBCC
T ss_pred CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCC--H--------HHHHHHHHHcCCcccCCC
Confidence 4578999999999999999999999999999999999999999998764 2 679999999999987543
|
| >d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]
Probab=99.28 E-value=1.5e-12 Score=105.54 Aligned_cols=63 Identities=22% Similarity=0.391 Sum_probs=57.1
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccc
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (937)
+++|.|+||+|++|+++||++|++++||.++++|+.++++.|+.+ .++ ++|.++|+++||+++
T Consensus 2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~---~~~--------~~i~~~i~~~GY~ve 64 (64)
T d1sb6a_ 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA---LGE--------EQLRTAIASAGHEVE 64 (64)
T ss_dssp EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESS---SCH--------HHHHHHHHHHCCCCC
T ss_pred eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccC---CCH--------HHHHHHHHHcCCCCC
Confidence 468999999999999999999999999999999999999999754 333 789999999999863
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.25 E-value=4.4e-11 Score=108.47 Aligned_cols=101 Identities=28% Similarity=0.298 Sum_probs=86.3
Q ss_pred CCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcCeEEEeccHHHHHhcCCCCcc--
Q 002310 615 LSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTST-- 692 (937)
Q Consensus 615 ~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~~~~l~~~~~~~~~-- 692 (937)
.+++++|.+++++|..|.||+++||++++++.++... ...+++..+|+|+.+ +.+.+|+++|+.+.++...+
T Consensus 10 ~~e~elL~~aaslE~~S~HPlA~AIv~~a~~~~~~~~--~~~~~~~~~G~Gi~g----~~v~vG~~~~~~~~~~~~~~~~ 83 (113)
T d2b8ea2 10 GDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELG--EPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEV 83 (113)
T ss_dssp SCHHHHHHHHHHHTTTCCSHHHHHHHHHHHTTTCCCC--CCSCEEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHH
T ss_pred CCHHHHHHHHHHHHCcCCCchHHHHHHHHHHhcCCCC--ccccceeeccceEEe----EEEEECcHHHHHhcCCCCCHHH
Confidence 3688999999999999999999999999999887644 347899999999886 46899999999998887653
Q ss_pred hhhHHHHHhCCCeEEEEEECCEEEEEEEe
Q 002310 693 FQEVEMEDLMNQSLVYVGVDNMLAGLIYV 721 (937)
Q Consensus 693 ~~~~~~~~~~~~~~~~v~~~~~~lG~i~l 721 (937)
.+.....+..|++++|++.|++++|++++
T Consensus 84 ~~~~~~~~~~G~T~v~va~d~~~~G~ial 112 (113)
T d2b8ea2 84 ELALEKLEREAKTAVIVARNGRVEGIIAV 112 (113)
T ss_dssp HHHHHHHHTTTCEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEE
Confidence 23345566789999999999999999987
|
| >d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone for superoxide dismutase, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.19 E-value=1.7e-11 Score=101.65 Aligned_cols=66 Identities=18% Similarity=0.371 Sum_probs=58.9
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccc
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (937)
..+.+|.|+ |+|++|+++||++|++++||.+++||+.+++++|+++ .++ ++|.++|+++||++.++
T Consensus 5 ~~~~~f~V~-M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~---~~~--------~~i~~~I~~~G~~A~l~ 70 (72)
T d1qupa2 5 TYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAP--------STIINTLRNCGKDAIIR 70 (72)
T ss_dssp CEEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCH--------HHHHHHHHHTTCCCEEE
T ss_pred cEEEEEEEc-cCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEee---CCH--------HHHHHHHHHhCCCEEEe
Confidence 456789995 9999999999999999999999999999999999875 333 78999999999998764
|
| >d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: ATX1 metallochaperone protein (ATOX1) species: Human (Homo sapiens), HAH1 [TaxId: 9606]
Probab=99.18 E-value=1.5e-11 Score=99.97 Aligned_cols=63 Identities=27% Similarity=0.425 Sum_probs=56.3
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccc
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (937)
+.+|+| +|+|++|+.+||++|++++|+ +++||+.+++++|+++. ++ ++|.++|+++||++.+.
T Consensus 2 k~ef~V-~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~---~~--------~~i~~~I~~~Gy~a~li 64 (66)
T d1fe0a_ 2 KHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEH---SM--------DTLLATLKKTGKTVSYL 64 (66)
T ss_dssp EEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESS---CH--------HHHHHHHHTTTSCEEEE
T ss_pred CEEEEE-ccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeC---CH--------HHHHHHHHHhCCeEEEe
Confidence 358999 599999999999999999998 69999999999999874 33 78999999999998753
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=99.12 E-value=3e-10 Score=106.74 Aligned_cols=122 Identities=16% Similarity=0.153 Sum_probs=90.9
Q ss_pred EEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCcccc-ccCCceEE---ecC-Cee
Q 002310 592 VVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVK-VADGTFIE---EPG-SGT 666 (937)
Q Consensus 592 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~-~~~~~~~~---~~g-~g~ 666 (937)
+++++++. +++++++++.+|+++|..|+||+++||+++|++.+..... ........ ... .+.
T Consensus 3 q~td~ip~-------------~G~~~~ell~~AA~aE~~SeHPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (136)
T d2a29a1 3 QASEFIPA-------------QGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMS 69 (136)
T ss_dssp EEEEEEEC-------------TTCCHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEE
T ss_pred CcceEEeC-------------CCCCHHHHHHHHHHHhCCCCchHHHHHHHHHHHhcCCCccccccccccccccccccceE
Confidence 47888886 7889999999999999999999999999999987543221 11122222 222 345
Q ss_pred EEEEcCeEEEeccHHHH----HhcCCCCcc--hhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCC
Q 002310 667 VAIIEDRKVSVGTIDWL----RSHGVDTST--FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIR 726 (937)
Q Consensus 667 ~~~i~~~~~~~G~~~~l----~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr 726 (937)
...+++..+.+|+++++ .+.+..... .+..+..+.+|.++++++.|++++|+|++.|++|
T Consensus 70 g~~~~g~~v~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 70 GINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK 135 (136)
T ss_dssp EEEETTEEEEEECHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEECCEEEEecHHHHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECCEEEEEEEEEeecC
Confidence 55789999999998655 444444332 2334456788999999999999999999999987
|
| >d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: ATX1 metallochaperone protein (ATOX1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.11 E-value=7.2e-11 Score=97.62 Aligned_cols=64 Identities=22% Similarity=0.426 Sum_probs=57.7
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcC-CCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccc
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQ-PQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~-~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (937)
.++.+|.|+ |||++|+.+||++|+++ |||.+++||+.+++++|..+ .++ ++|.++|+++||++.
T Consensus 3 ~kt~~f~V~-MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~---~~~--------~~i~~~i~~~G~~~~ 67 (72)
T d1cc8a_ 3 IKHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPY--------DFILEKIKKTGKEVR 67 (72)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCH--------HHHHHHHHTTSSCEE
T ss_pred cEEEEEEEC-cCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeec---CCH--------HHHHHHHHHHCCccC
Confidence 567899997 99999999999999998 59999999999999999876 333 889999999999875
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.11 E-value=1.8e-10 Score=113.14 Aligned_cols=129 Identities=18% Similarity=0.139 Sum_probs=100.5
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHh
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQ 785 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq 785 (937)
.+++..+++.+-.+...|. ..|+.|++.|+.+.++||+....+...++++++. .++.... +|...++.+.
T Consensus 20 ~v~~~~dG~e~k~F~~~Dg------~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~--~~~~~~~--~K~~~l~~~~ 89 (177)
T d1k1ea_ 20 QLHYDANGEAIKSFHVRDG------LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK--LFFLGKL--EKETACFDLM 89 (177)
T ss_dssp EEEEETTEEEEEEEEHHHH------HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC--EEEESCS--CHHHHHHHHH
T ss_pred eEEEeCCCCEEEEEECcch------HHHHHHhhhcEEEEEecCCchhHHHHHHhhhccc--ccccccc--cHHHHHHHHH
Confidence 4566667766555554442 3799999999999999999999999999999996 5665554 4554444433
Q ss_pred c----CCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCC----hhHHHHHHHHHH
Q 002310 786 N----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR----LSQLLVALELSR 844 (937)
Q Consensus 786 ~----~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~----l~~l~~~i~~~R 844 (937)
+ ....|+|+||+.||.|+|+.|++++||+++.+.+++.||+|+..+. ++.+.+.|..++
T Consensus 90 ~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~~~ 156 (177)
T d1k1ea_ 90 KQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQ 156 (177)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHT
T ss_pred HHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCchHHHHHHHHHHHC
Confidence 2 3468999999999999999999999999999999999999998765 555555554433
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.07 E-value=3.2e-10 Score=115.40 Aligned_cols=135 Identities=21% Similarity=0.158 Sum_probs=105.6
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------- 766 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------- 766 (937)
.+.+..||+++- =...+.+.+.+++++|+++|++++++||.....+..+++.+++...
T Consensus 4 ~i~~D~DGTL~~---~~~~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~ 80 (230)
T d1wr8a_ 4 AISIDIDGTITY---PNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLA 80 (230)
T ss_dssp EEEEESTTTTBC---TTSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESC
T ss_pred EEEEecCCCCcC---CCCccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccc
Confidence 456667777631 1235889999999999999999999999999999999999987321
Q ss_pred --------------------------------------------------------------eeEeccChhhHHHHHHHH
Q 002310 767 --------------------------------------------------------------KVLSGVKPNEKKRFINEL 784 (937)
Q Consensus 767 --------------------------------------------------------------~v~ar~~Pe~K~~iV~~L 784 (937)
.+........|...++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l 160 (230)
T d1wr8a_ 81 SMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKA 160 (230)
T ss_dssp CCSHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHH
T ss_pred cccHHHHHHHHHHHhcccccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhccc
Confidence 011111234666666665
Q ss_pred hcC----CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002310 785 QND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 785 q~~----G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~ 843 (937)
.++ ...|+++|||.||.+||+.|++||+|+++.+.+++.||+|+.+++...+.++++.-
T Consensus 161 ~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 161 SEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp HHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred ccccccchhheeeeecCccHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 432 35699999999999999999999999999999999999999988888888877643
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=1.2e-10 Score=118.66 Aligned_cols=110 Identities=22% Similarity=0.363 Sum_probs=91.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-------------------cChhhHHHHHHHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-------------------VKPNEKKRFINEL 784 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-------------------~~Pe~K~~iV~~L 784 (937)
+++|++.+.|+.||+.|++++++||.....+..+++.+||+...++|. ..+..|.++++.+
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~ 161 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLL 161 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHHH
Confidence 478999999999999999999999999999999999999975444431 2357799999999
Q ss_pred hcC--CCEEEEEcCCcccHHHHHhCCeeEEeCC--ChHHHHhhcCEEEeCCChhH
Q 002310 785 QND--ENVVAMVGDGINDAAALASSHIGVAMGG--GVGAASEVASVVLMGNRLSQ 835 (937)
Q Consensus 785 q~~--G~~VamvGDG~NDa~AL~~AdVGIamg~--gt~~a~~aADivL~~~~l~~ 835 (937)
+++ -..+.|+|||.||.+|++.|+++||++. .....++.+|.++. +|..
T Consensus 162 ~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~e 214 (217)
T d1nnla_ 162 KEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVE 214 (217)
T ss_dssp HHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGG
T ss_pred HhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHH
Confidence 764 2469999999999999999999999973 44666778999874 4554
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.00 E-value=8.1e-10 Score=112.77 Aligned_cols=133 Identities=17% Similarity=0.170 Sum_probs=105.0
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------- 766 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------- 766 (937)
.+++..||+++ -=+..+.+++.++++.|++.|++++++||.+...+..+++.+|+...
T Consensus 5 li~~D~DGTL~---~~~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~ 81 (225)
T d1l6ra_ 5 LAAIDVDGNLT---DRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKF 81 (225)
T ss_dssp EEEEEHHHHSB---CTTSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEES
T ss_pred EEEEecCCCCc---CCCCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEe
Confidence 34455566553 22456789999999999999999999999999999999999997321
Q ss_pred -----------------------------------------------------ee-----EeccCh--hhHHHHHHHHhc
Q 002310 767 -----------------------------------------------------KV-----LSGVKP--NEKKRFINELQN 786 (937)
Q Consensus 767 -----------------------------------------------------~v-----~ar~~P--e~K~~iV~~Lq~ 786 (937)
.+ +....| ..|...++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~ 161 (225)
T d1l6ra_ 82 FSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKE 161 (225)
T ss_dssp SCSHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHhcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhh
Confidence 01 111222 378777776654
Q ss_pred C----CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 787 D----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 787 ~----G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+ ...|+++|||.||.+|++.|++||||+++.+.+++.||+|+..++...|.++++
T Consensus 162 ~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~ 220 (225)
T d1l6ra_ 162 MYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 220 (225)
T ss_dssp HTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred hhccchhheeeecCCcchHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHH
Confidence 3 245899999999999999999999999999999999999999999888888776
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.97 E-value=4.6e-10 Score=114.41 Aligned_cols=121 Identities=18% Similarity=0.162 Sum_probs=99.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeE-----------------------eccChhhHHHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVL-----------------------SGVKPNEKKRF 780 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~-----------------------ar~~Pe~K~~i 780 (937)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+.. .++ ++.+|+.|..+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~-~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 153 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKD-RIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSV 153 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGG-GEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHH
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCcc-ceeeeeEEEeCCcceeccccccccccccCCHHHHHHH
Confidence 578999999999999999999999999999999999999852 222 34578899999
Q ss_pred HHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHH
Q 002310 781 INELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRL 845 (937)
Q Consensus 781 V~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~ 845 (937)
++.++..++.|.|+||+.||.+|+++||+++|++...+.+++..--...-++|+.|...++.-..
T Consensus 154 ~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 218 (226)
T d2feaa1 154 IHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKE 218 (226)
T ss_dssp HHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHH
T ss_pred HHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999986555555543223345689888777664433
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=5.6e-09 Score=109.21 Aligned_cols=134 Identities=18% Similarity=0.261 Sum_probs=104.4
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc------------------
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 766 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------ 766 (937)
.+++...||+++. =.-.+-+.+.+++++|++.|++++++||.+...+..+.+++++...
T Consensus 5 Kli~~DlDGTL~~---~~~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~ 81 (271)
T d1rkqa_ 5 KLIAIDMDGTLLL---PDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADG 81 (271)
T ss_dssp CEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTC
T ss_pred eEEEEeCCccccC---CCCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCC
Confidence 3466667877743 2345779999999999999999999999999999999999886210
Q ss_pred --------------------------------------------------------------------------------
Q 002310 767 -------------------------------------------------------------------------------- 766 (937)
Q Consensus 767 -------------------------------------------------------------------------------- 766 (937)
T Consensus 82 ~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (271)
T d1rkqa_ 82 STVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEP 161 (271)
T ss_dssp CEEEECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCH
T ss_pred eEEEeecccHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCH
Confidence
Q ss_pred ------------------e------eEeccChh--hHHHHHHHHhcC----CCEEEEEcCCcccHHHHHhCCeeEEeCCC
Q 002310 767 ------------------K------VLSGVKPN--EKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGG 816 (937)
Q Consensus 767 ------------------~------v~ar~~Pe--~K~~iV~~Lq~~----G~~VamvGDG~NDa~AL~~AdVGIamg~g 816 (937)
. .+....|. +|...|+.+.+. ...++++|||.||.+||+.|+.||+|+++
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na 241 (271)
T d1rkqa_ 162 AILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNA 241 (271)
T ss_dssp HHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred HHHHHHHHHHHHHhhcceEEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCC
Confidence 0 01112343 587777777553 23589999999999999999999999999
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 817 VGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 817 t~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.+..++.||+|...++=..+.++++
T Consensus 242 ~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 242 IPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp CHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CHHHHHhCCEEcCCCCcChHHHHHH
Confidence 9999999999988766566666654
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.76 E-value=1.9e-08 Score=99.81 Aligned_cols=117 Identities=16% Similarity=0.167 Sum_probs=95.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------eeEeccChhhHHHHHHHHhcCCCE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------KVLSGVKPNEKKRFINELQNDENV 790 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~-------------~v~ar~~Pe~K~~iV~~Lq~~G~~ 790 (937)
+..++....++.++ .+.++..+|+.............++... .......+..+...++.++-....
T Consensus 69 ~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e 147 (206)
T d1rkua_ 69 KPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR 147 (206)
T ss_dssp CCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred cccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhcccccc
Confidence 45667777777665 6899999999999999999999998532 122345667777888888888999
Q ss_pred EEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 002310 791 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~ 842 (937)
|+++|||.||.+||+.|++||||+...++.++++|++.. +++..+.+.+..
T Consensus 148 viaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 148 VIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp EEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred eEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 999999999999999999999998778888888899876 568878776654
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.75 E-value=1e-08 Score=107.97 Aligned_cols=66 Identities=26% Similarity=0.373 Sum_probs=56.2
Q ss_pred hHHHHHHHHhcC-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 776 EKKRFINELQND-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 776 ~K~~iV~~Lq~~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.||||+++.+.+++.||+|..+++-..+.++++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 687777777553 2 36999999999999999999999999999999999999998777777777664
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.74 E-value=4.8e-09 Score=104.59 Aligned_cols=115 Identities=18% Similarity=0.242 Sum_probs=91.8
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-----------------cChhhHHH----HH
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------------VKPNEKKR----FI 781 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-----------------~~Pe~K~~----iV 781 (937)
.++.+++.+.++.++..|..+.++||.....+....++.++.. ++.. ..+..|.. +.
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY--AFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 151 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE--EEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhh--hhhhhhccccccccccccccccccccccchhhhHH
Confidence 4788899999999999999999999999999999999999853 1111 11223333 33
Q ss_pred HHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHH
Q 002310 782 NELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 782 ~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i 840 (937)
+.++-....+.++|||.||.+|++.|++|||| ++.+..++.||+|+-.+|+..|.+.|
T Consensus 152 ~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 152 KIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred HHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 34444455799999999999999999999999 67888899999999888888877654
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.72 E-value=4e-09 Score=110.33 Aligned_cols=132 Identities=17% Similarity=0.159 Sum_probs=101.6
Q ss_pred EEEEEECCEEEEEEEecC-c-CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-----------------
Q 002310 706 LVYVGVDNMLAGLIYVED-R-IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD----------------- 766 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D-~-lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~----------------- 766 (937)
++++..||+++. .+ . +.|.+.++|++|++.|++++++||-+...+..+.+++++...
T Consensus 4 li~~DlDGTLl~----~~~~~~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~ 79 (269)
T d1rlma_ 4 VIVTDMDGTFLN----DAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLF 79 (269)
T ss_dssp EEEECCCCCCSC----TTSCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEE
T ss_pred EEEEeCCccCcC----CCCcCChHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEEE
Confidence 455566777642 22 2 347899999999999999999999999999888888875210
Q ss_pred --------------------------------------------------------------------------------
Q 002310 767 -------------------------------------------------------------------------------- 766 (937)
Q Consensus 767 -------------------------------------------------------------------------------- 766 (937)
T Consensus 80 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (269)
T d1rlma_ 80 HGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPL 159 (269)
T ss_dssp ECCCCHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHH
T ss_pred EeccchHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecCCHHHHHH
Confidence
Q ss_pred --------------e-----eEeccChh--hHHHHHHHHhcC-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHH
Q 002310 767 --------------K-----VLSGVKPN--EKKRFINELQND-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAAS 821 (937)
Q Consensus 767 --------------~-----v~ar~~Pe--~K~~iV~~Lq~~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~ 821 (937)
. .+-.++|. .|..-++.|+++ | ..|.++|||.||.+||+.|+.||+|+++.+..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk 239 (269)
T d1rlma_ 160 VIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIK 239 (269)
T ss_dssp HHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHH
T ss_pred HHHHHHHHhhcceEEEEEcCceEEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHH
Confidence 0 01123343 488777777553 2 358999999999999999999999999999999
Q ss_pred hhcCEEEeCCChhHHHHHHH
Q 002310 822 EVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 822 ~aADivL~~~~l~~l~~~i~ 841 (937)
+.||.|+.+++-..+.+.|+
T Consensus 240 ~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 240 QIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp HHCSEECCCGGGTHHHHHHH
T ss_pred HhCCEEcCCCCccHHHHHHH
Confidence 99999998878777777765
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.62 E-value=1.1e-08 Score=116.18 Aligned_cols=73 Identities=8% Similarity=-0.078 Sum_probs=66.9
Q ss_pred cHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCC--CccCCCccEE
Q 002310 516 PVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKT--GTLTIGRPVV 593 (937)
Q Consensus 516 ~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKT--GTLT~~~~~v 593 (937)
.+...+..++++.+. ++|.+|+ +++.++++.+..+++|+|++||+..++|++|+..+.|.||| +|||.|.+.+
T Consensus 176 ~~~~~~~~ai~l~V~---~iPEgLp--~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v 250 (472)
T d1wpga4 176 GAIYYFKIAVALAVA---AIPEGLP--AVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEV 250 (472)
T ss_dssp CGGGHHHHHHHHHHH---HSCTTHH--HHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---hChhhHH--HHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHH
Confidence 456677888999999 9999999 99999999999999999999999999999999999999998 9999886554
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.54 E-value=6.1e-08 Score=101.16 Aligned_cols=66 Identities=23% Similarity=0.327 Sum_probs=53.4
Q ss_pred hHHHHHHHHhcC-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 776 EKKRFINELQND-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 776 ~K~~iV~~Lq~~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.|...|+.+.+. | ..|+++|||.||.+||+.|++||+|+++.+.+++.||+|+.+++-..+..+++
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 355555444332 2 24888999999999999999999999999999999999998888777877764
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.52 E-value=7.8e-08 Score=100.57 Aligned_cols=53 Identities=26% Similarity=0.280 Sum_probs=44.5
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChh-HHHHHHH
Q 002310 789 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLS-QLLVALE 841 (937)
Q Consensus 789 ~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~-~l~~~i~ 841 (937)
..|+++|||.||.+||+.|+.||+|+++.+.+++.||+|+..++-. .+.++++
T Consensus 224 ~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 224 DQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp GGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred ceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 4699999999999999999999999999999999999998755433 3444443
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.50 E-value=5.5e-08 Score=101.05 Aligned_cols=66 Identities=27% Similarity=0.293 Sum_probs=56.6
Q ss_pred hHHHHHHHHhcC----CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 776 EKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 776 ~K~~iV~~Lq~~----G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.|..-++.|.++ ...++++|||.||.+||+.|+.||||+++.+.+++.||.|..+++=..+.++++
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~ 255 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 255 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHH
Confidence 587777777542 346899999999999999999999999999999999999988877778887775
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.48 E-value=2.1e-07 Score=94.82 Aligned_cols=53 Identities=19% Similarity=0.377 Sum_probs=46.4
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
.+++..||+++ .+...+.++++|++|+++|+++++.||-+...+..+.+++++
T Consensus 4 li~~DlDGTLl-----~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~ 56 (243)
T d1wzca1 4 LIFLDIDKTLI-----PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEV 56 (243)
T ss_dssp EEEECCBTTTB-----SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTC
T ss_pred EEEEeCCCCCC-----CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcc
Confidence 45566778764 566678899999999999999999999999999999999997
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.22 E-value=2.5e-06 Score=85.65 Aligned_cols=55 Identities=20% Similarity=0.279 Sum_probs=46.6
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
+++...||+++. =...+.+.+++++++|+++|+.++++||-+...+..+.+++++
T Consensus 6 li~~DlDGTLl~---~~~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~ 60 (232)
T d1xvia_ 6 LVFSDLDGTLLD---SHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 60 (232)
T ss_dssp EEEEECTTTTSC---SSCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred EEEEECCCCccC---CcCcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhcc
Confidence 455677888652 2334778999999999999999999999999999999999997
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.19 E-value=1.2e-06 Score=89.69 Aligned_cols=132 Identities=16% Similarity=0.117 Sum_probs=94.7
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc------------------
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 766 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------ 766 (937)
.+++...||+++ .+.-.++..+.+.++++.|+.+.++||-+...+..+.+++++...
T Consensus 4 ~li~~DlDGTL~-----~~~~~~~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~ 78 (244)
T d1s2oa1 4 LLLISDLDNTWV-----GDQQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLD 78 (244)
T ss_dssp EEEEECTBTTTB-----SCHHHHHHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEEC
T ss_pred eEEEEECcccCC-----CCCCCHHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcc
Confidence 344556677763 233233444556667888999999999999999999999987310
Q ss_pred -------------------------------------------------------------------ee-----Eecc--
Q 002310 767 -------------------------------------------------------------------KV-----LSGV-- 772 (937)
Q Consensus 767 -------------------------------------------------------------------~v-----~ar~-- 772 (937)
.+ ...+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 158 (244)
T d1s2oa1 79 QHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLP 158 (244)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEE
T ss_pred hHHHHHHHHHHhHHHHHHHHhhcccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEe
Confidence 00 0111
Q ss_pred ChhhHHHHHHHHhcC-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcC-------EEEeCCChhHHHHHHH
Q 002310 773 KPNEKKRFINELQND-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVAS-------VVLMGNRLSQLLVALE 841 (937)
Q Consensus 773 ~Pe~K~~iV~~Lq~~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aAD-------ivL~~~~l~~l~~~i~ 841 (937)
....|...++.+.+. | ..|.++|||.||.+||+.|+.|++|+++.+..++.|| ++-..++...+.++++
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHH
Confidence 244688888887664 2 3488999999999999999999999999999998887 4444555666666654
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.80 E-value=2e-05 Score=79.13 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=82.3
Q ss_pred cCChhHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCCc--eeEecc---ChhhH----HHHHHHHhcC---CCE
Q 002310 724 RIRDDAAHVVNSLSSQG-IGVYMLSGDKKNSAEYVASLVGIPKD--KVLSGV---KPNEK----KRFINELQND---ENV 790 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aG-I~v~mlTGD~~~tA~~iA~~~GI~~~--~v~ar~---~Pe~K----~~iV~~Lq~~---G~~ 790 (937)
++-|++.++++.|++.| +++.++|+.....+..+.+..||..- .+.+.- .+..+ ...++.+... ...
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~~ 170 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQ 170 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGG
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccccchhHHHHHHhhhhcccCCChhH
Confidence 44689999999999987 89999999999999999999999531 222221 11222 2234444332 357
Q ss_pred EEEEcCCcccHHHHHhCCe---eEEeCC--ChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 791 VAMVGDGINDAAALASSHI---GVAMGG--GVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdV---GIamg~--gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+.||||+.+|..|-+.|++ +|+-|. ..+.....+|+++ ++++.+.+++.
T Consensus 171 ~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 171 IVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp EEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred heeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 9999999999999999994 444452 2233444689998 57888877765
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.70 E-value=5.8e-05 Score=78.72 Aligned_cols=116 Identities=16% Similarity=0.238 Sum_probs=84.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeEec-----------------cChhhHHHHH---
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLSG-----------------VKPNEKKRFI--- 781 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~ar-----------------~~Pe~K~~iV--- 781 (937)
++|+++++.++.|++.|+.+.++||--......+++++|++.. .|+|. .....|...+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~~~ 214 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKN 214 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTT
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhhhh
Confidence 5899999999999999999999999999999999999999643 35552 1233444332
Q ss_pred -H--HHhcCCCEEEEEcCCcccHHHHHh---CCeeEEeC--C-----ChHHHHhhcCEEEeCCChhHHHHH
Q 002310 782 -N--ELQNDENVVAMVGDGINDAAALAS---SHIGVAMG--G-----GVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 782 -~--~Lq~~G~~VamvGDG~NDa~AL~~---AdVGIamg--~-----gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
. .+++....|.++|||+||..|.+. ++..+++| . .-+.-+++-||||.+|.--.++..
T Consensus 215 ~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~~~ 285 (291)
T d2bdua1 215 TDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 285 (291)
T ss_dssp HHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred HHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhHHHH
Confidence 1 222344679999999999999874 45666665 2 223344688999998865555443
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.69 E-value=1.6e-05 Score=79.31 Aligned_cols=116 Identities=16% Similarity=0.206 Sum_probs=86.9
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeE-ec------cChhhHHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVL-SG------VKPNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~-ar------~~Pe~K~~iV~~Lq~~G~~Vam 793 (937)
..+.|++++.++.|++.|+++.++|+.....+..+.+++||.+- .++ +. -.|+--..+.+.++-....++|
T Consensus 94 ~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~ 173 (224)
T d2hsza1 94 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF 173 (224)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred cchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccccccccchhhHHHHHHhhhhhhccch
Confidence 35679999999999999999999999999999999999999531 122 11 2345455666666667778999
Q ss_pred EcCCcccHHHHHhCCe-eEEeC--C--ChHHHHhhcCEEEeCCChhHHHHHH
Q 002310 794 VGDGINDAAALASSHI-GVAMG--G--GVGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 794 vGDG~NDa~AL~~AdV-GIamg--~--gt~~a~~aADivL~~~~l~~l~~~i 840 (937)
|||..+|..+-+.|++ .|.+. . ..+.....+|.++ +++..|++++
T Consensus 174 igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 174 VGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred hcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence 9999999999999987 44443 1 2234445688887 5677776654
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.56 E-value=0.00011 Score=74.91 Aligned_cols=116 Identities=19% Similarity=0.168 Sum_probs=85.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEe-----cc--ChhhHHHHHHHHhcC-CCEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS-----GV--KPNEKKRFINELQND-ENVVA 792 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~a-----r~--~Pe~K~~iV~~Lq~~-G~~Va 792 (937)
++.|++.++++.|++.|+++.++|+........+-+..|+.. +.+++ +. .|+.=...++.+.-. .+.|+
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v 178 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMI 178 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEE
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccccccChHHHHHHHHHhCCCCcceEE
Confidence 688999999999999999999999999999999999988742 22222 11 233345556666543 46799
Q ss_pred EEcCCcccHHHHHhCCee-EEeCCChH---------------------------HHHhhcCEEEeCCChhHHHHHHH
Q 002310 793 MVGDGINDAAALASSHIG-VAMGGGVG---------------------------AASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdVG-Iamg~gt~---------------------------~a~~aADivL~~~~l~~l~~~i~ 841 (937)
||||..+|..+-+.|++- |++..|.. ..+..||+|+ +++..|+.+|+
T Consensus 179 ~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi--~~l~eL~~ii~ 253 (257)
T d1swva_ 179 KVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI--ETMQELESVME 253 (257)
T ss_dssp EEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--SSGGGHHHHHH
T ss_pred EEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEE--CCHHHHHHHHH
Confidence 999999999999999973 44433320 1112389998 67888888876
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.46 E-value=0.0002 Score=71.34 Aligned_cols=97 Identities=11% Similarity=-0.001 Sum_probs=61.2
Q ss_pred CCChHHHHHHHHHhcCCcccccc--CCceEEec-----CCeeEEE-Ec---C--eEEEeccHHHHHhcCCCCcc------
Q 002310 632 VHPIGKAIVEAAEFSNCQNVKVA--DGTFIEEP-----GSGTVAI-IE---D--RKVSVGTIDWLRSHGVDTST------ 692 (937)
Q Consensus 632 ~hP~~~Ai~~~a~~~~~~~~~~~--~~~~~~~~-----g~g~~~~-i~---~--~~~~~G~~~~l~~~~~~~~~------ 692 (937)
.+|.+.|++.++...+....... ...+.+.| .+..... .+ + ..|.||+++.+.+.|..+..
T Consensus 65 GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~ 144 (214)
T d1q3ia_ 65 GDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIP 144 (214)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEE
T ss_pred cChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceee
Confidence 58999999999887665432111 11122222 2222222 11 1 23789999999999863210
Q ss_pred ---------hhhHHHHHhCCCeEEEEEE------------------------CCEEEEEEEecCcCChh
Q 002310 693 ---------FQEVEMEDLMNQSLVYVGV------------------------DNMLAGLIYVEDRIRDD 728 (937)
Q Consensus 693 ---------~~~~~~~~~~~~~~~~v~~------------------------~~~~lG~i~l~D~lr~~ 728 (937)
....++.+.+|.+++.+++ |++|+|+++++||||++
T Consensus 145 l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 145 LDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred chHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 1122346778999999875 46899999999999974
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.39 E-value=0.00015 Score=71.84 Aligned_cols=111 Identities=19% Similarity=0.181 Sum_probs=80.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cCh--hhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~P--e~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+.. +.+++. ..| +-=..+++.+.-....++||
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i 167 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVAL 167 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEE
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHcCCCchhcEEE
Confidence 467999999999999999999999999999999999999952 123221 223 33455666666566789999
Q ss_pred cCCcccHHHHHhCCeeE-EeCC---ChHHHHhhcCEEEeCCChhHH
Q 002310 795 GDGINDAAALASSHIGV-AMGG---GVGAASEVASVVLMGNRLSQL 836 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGI-amg~---gt~~a~~aADivL~~~~l~~l 836 (937)
||..+|..|-+.|++.. ++.. ..+.....||.++ ++|..|
T Consensus 168 gD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~el 211 (218)
T d1te2a_ 168 EDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTEL 211 (218)
T ss_dssp ESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGGC
T ss_pred eeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEE--CChhhC
Confidence 99999999999998743 3321 2222234678776 456644
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.26 E-value=0.00014 Score=72.11 Aligned_cols=51 Identities=18% Similarity=0.257 Sum_probs=39.1
Q ss_pred hHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEe
Q 002310 776 EKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLM 829 (937)
Q Consensus 776 ~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~ 829 (937)
.|..-++.|.++. .+.++||+.||.+|++.|+-|++|+.|. ++..|+.++.
T Consensus 159 ~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~ 209 (229)
T d1u02a_ 159 NKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVA 209 (229)
T ss_dssp CHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEES
T ss_pred CHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEEeCC--CCccCeEEcC
Confidence 6888888888765 5678899999999999997766664232 1457888874
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.22 E-value=6.8e-05 Score=74.97 Aligned_cols=53 Identities=17% Similarity=0.357 Sum_probs=44.2
Q ss_pred hHHHHHHHHhcC-CCEEEEEcC----CcccHHHHHhCC-eeEEeCCChHHHHhhcCEEE
Q 002310 776 EKKRFINELQND-ENVVAMVGD----GINDAAALASSH-IGVAMGGGVGAASEVASVVL 828 (937)
Q Consensus 776 ~K~~iV~~Lq~~-G~~VamvGD----G~NDa~AL~~Ad-VGIamg~gt~~a~~aADivL 828 (937)
.|..-++.|.+. ...|.++|| |.||.+||+.|. .|+||+++.|..+..+||+|
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 566667777553 457999999 569999999997 69999999999999998864
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.10 E-value=0.00018 Score=70.78 Aligned_cols=114 Identities=16% Similarity=0.179 Sum_probs=81.2
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeE-ecc----ChhhHHHHHHHHhcCCCEEEEEc
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGV----KPNEKKRFINELQNDENVVAMVG 795 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~-ar~----~Pe~K~~iV~~Lq~~G~~VamvG 795 (937)
.++.+++.+.++.|++.+ ++.++|+.....++.+.+.+|+.. +.++ +.- .|+-...+++.++-....+.|||
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VG 161 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIG 161 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccccccccccccccccccccchhhhhhhcccccceeec
Confidence 356799999999999775 899999999999999999999853 1222 222 34433444444444456799999
Q ss_pred CCcccHHHHHhCCe-eEEe--CC--ChHHHHhhcCEEEeCCChhHHHHH
Q 002310 796 DGINDAAALASSHI-GVAM--GG--GVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 796 DG~NDa~AL~~AdV-GIam--g~--gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
|+.||..|-++|++ .|++ |. ..+.....+|+++ +++..+...
T Consensus 162 Ds~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~ 208 (210)
T d2ah5a1 162 DTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAY 208 (210)
T ss_dssp SSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHH
T ss_pred CCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHH
Confidence 99999999999997 5555 42 2233334589986 457776654
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.10 E-value=0.0018 Score=62.28 Aligned_cols=116 Identities=20% Similarity=0.232 Sum_probs=78.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHH---------------HHHHHHHcCCCCc-eeEeccC--------------
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNS---------------AEYVASLVGIPKD-KVLSGVK-------------- 773 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~t---------------A~~iA~~~GI~~~-~v~ar~~-------------- 773 (937)
++-|++.++++.|+++|+++.++|...... ........|+... ..+|.-.
T Consensus 27 ~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~ 106 (182)
T d2gmwa1 27 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDC 106 (182)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSS
T ss_pred eECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeecccccccccccccccccc
Confidence 345799999999999999999999875321 1222333444322 2333322
Q ss_pred ----hhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCee--EEeCC---ChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 774 ----PNEKKRFINELQNDENVVAMVGDGINDAAALASSHIG--VAMGG---GVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 774 ----Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVG--Iamg~---gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
|.-=..+++.+.-.-..+.||||..+|..|-++|+++ +.+.. -.+.....||+|+ +++..+++.|+
T Consensus 107 rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl~~~ik 181 (182)
T d2gmwa1 107 RKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADLPQAIK 181 (182)
T ss_dssp STTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGHHHHHH
T ss_pred cCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHHHHHhc
Confidence 3333555666665556799999999999999999985 44432 2345556799987 67888888775
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.83 E-value=0.00061 Score=66.50 Aligned_cols=110 Identities=14% Similarity=0.192 Sum_probs=76.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-------cChhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-------~~Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
.+.|+++++++.|++.|+++.++|+-.. .+..+-++.|+.. +.+++. -.|+--..+++.+.-....++||
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~V 160 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYI 160 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCCceEEEE
Confidence 4679999999999999999999998554 5567889999964 123321 23444455666665556789999
Q ss_pred cCCcccHHHHHhCCee-EEeCCChHHHHhhcCEEEeCCChhHHHHHH
Q 002310 795 GDGINDAAALASSHIG-VAMGGGVGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 795 GDG~NDa~AL~~AdVG-Iamg~gt~~a~~aADivL~~~~l~~l~~~i 840 (937)
||..+|..+-++|++- |.+..+.. .+|..+ +++..+..++
T Consensus 161 gD~~~Di~~A~~~G~~~i~v~~~~~----~~~~~~--~~~~dl~~l~ 201 (204)
T d2go7a1 161 GDRTLDVEFAQNSGIQSINFLESTY----EGNHRI--QALADISRIF 201 (204)
T ss_dssp ESSHHHHHHHHHHTCEEEESSCCSC----TTEEEC--SSTTHHHHHT
T ss_pred eCCHHHHHHHHHcCCeEEEEcCCCC----CcCeec--CCHHHHHHHh
Confidence 9999999999999984 34544432 234333 3455555443
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.66 E-value=0.0034 Score=62.20 Aligned_cols=115 Identities=14% Similarity=0.235 Sum_probs=81.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cChhhH--HHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPNEK--KRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~Pe~K--~~iV~~Lq~~G~~Vamv 794 (937)
++.||+.++++.|+ .|+++.++|+........+.+.+|+.. +.+++. ..|+-+ ..+++.+.-....++||
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~v 178 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV 178 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccccccccccccccchhhHHHHHHHhhhccccccccee
Confidence 57899999999996 589999999999999999999999852 133221 233322 33444554445679999
Q ss_pred cCC-cccHHHHHhCCeeEE-e--CCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 795 GDG-INDAAALASSHIGVA-M--GGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 795 GDG-~NDa~AL~~AdVGIa-m--g~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
||. .+|..+-+.|++-.. + +.......+.+|+++ ++++.++++++
T Consensus 179 gD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 179 GDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp ESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred ecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHH
Confidence 997 699999999887532 2 223333445789887 46888887776
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.66 E-value=0.0021 Score=63.84 Aligned_cols=107 Identities=15% Similarity=0.230 Sum_probs=77.6
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-----eeE---eccChhhH--HHHHHHHhcCCCEE
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-----KVL---SGVKPNEK--KRFINELQNDENVV 791 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~-----~v~---ar~~Pe~K--~~iV~~Lq~~G~~V 791 (937)
.-.+.||+.+.+++|++.|+++.++|+..........+.+|+..- ..+ .+..|+-. ....+.+.-....+
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~ 204 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNI 204 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGE
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcCcE
Confidence 346789999999999999999999999999999999999997421 111 12344333 44555555556789
Q ss_pred EEEcCCcccHHHHHhCCeeEEe----C-CChHHHHhhcCEEE
Q 002310 792 AMVGDGINDAAALASSHIGVAM----G-GGVGAASEVASVVL 828 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVGIam----g-~gt~~a~~aADivL 828 (937)
+||||..+|+.+-++|++-... | .........++.++
T Consensus 205 l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i 246 (253)
T d1zs9a1 205 LFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 246 (253)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEE
Confidence 9999999999999999985544 2 22223334566665
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.56 E-value=0.0006 Score=66.78 Aligned_cols=112 Identities=11% Similarity=0.172 Sum_probs=80.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeEec-------cChhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLSG-------VKPNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~ar-------~~Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++ ++++.++|+-....+..+.++.|+... .+++. -.|+--..+++.++-....+.||
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~V 160 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFI 160 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred ccccchhhhhhhhcc-cccccccccccccccccccccccccccccccccccccccchhhhhhhcccccceeeeccceeEe
Confidence 466899999999975 799999999999999999999998531 22211 12333355555554444679999
Q ss_pred cCCcccHHHHHhCCeeEEe---CCChHHHHhhcCEEEeCCChhHHHH
Q 002310 795 GDGINDAAALASSHIGVAM---GGGVGAASEVASVVLMGNRLSQLLV 838 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIam---g~gt~~a~~aADivL~~~~l~~l~~ 838 (937)
||..+|..+-++|++.... |..+....+.+|.++ +++..|.+
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll~ 205 (207)
T d2hdoa1 161 GDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDILE 205 (207)
T ss_dssp ESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGGG
T ss_pred cCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHHHh
Confidence 9999999999999887654 333444445678776 45665543
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.55 E-value=0.002 Score=60.74 Aligned_cols=86 Identities=13% Similarity=0.096 Sum_probs=65.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcCCCC--ceeEeccChhhH--HHHHHHHhcCCCEEEEEcCCc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGD-KKNSAEYVASLVGIPK--DKVLSGVKPNEK--KRFINELQNDENVVAMVGDGI 798 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD-~~~tA~~iA~~~GI~~--~~v~ar~~Pe~K--~~iV~~Lq~~G~~VamvGDG~ 798 (937)
++.|++.++++.|++.|+++.++|.- ....+..+-+..++.. ..+...-.|..+ .++.+.+.-....+.||||..
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~ 125 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDEN 125 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecccCCChHHHHHHHHHhCCChHHEEEEcCCH
Confidence 57899999999999999999999964 4566777788888742 133344444433 345555555566899999999
Q ss_pred ccHHHHHhCCe
Q 002310 799 NDAAALASSHI 809 (937)
Q Consensus 799 NDa~AL~~AdV 809 (937)
+|..+-++|.+
T Consensus 126 ~di~aA~~aG~ 136 (164)
T d1u7pa_ 126 RNIIDVGRLGV 136 (164)
T ss_dssp HHHHHHHTTTC
T ss_pred HHHHHHHHcCC
Confidence 99999999977
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.40 E-value=0.0053 Score=61.28 Aligned_cols=116 Identities=15% Similarity=0.191 Sum_probs=81.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeE-eccChhhH------HHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKPNEK------KRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~-ar~~Pe~K------~~iV~~Lq~~G~~Vamv 794 (937)
.+.|++.++++.|++ |+++.++|+.........-+++|+.. +.++ +...+..| ..+++.+.-....+.||
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~i 187 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV 187 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhhcCHHhccee
Confidence 467999999999985 89999999999999999999999853 1232 22222223 34445554445579999
Q ss_pred cCCc-ccHHHHHhCCee-EEeC--C--ChHHHHhhcCEEEeCCChhHHHHHHHH
Q 002310 795 GDGI-NDAAALASSHIG-VAMG--G--GVGAASEVASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 795 GDG~-NDa~AL~~AdVG-Iamg--~--gt~~a~~aADivL~~~~l~~l~~~i~~ 842 (937)
||.. +|..+-+.|++. +..- . ........+|+++ +++..|+.+++.
T Consensus 188 GD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~~ 239 (247)
T d2gfha1 188 GDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQS 239 (247)
T ss_dssp ESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHHH
T ss_pred ccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEE--CCHHHHHHHHHH
Confidence 9985 899999999985 5431 1 1122223478887 468888887763
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.90 E-value=0.013 Score=55.99 Aligned_cols=100 Identities=14% Similarity=0.180 Sum_probs=70.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-c----C--hhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-V----K--PNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-~----~--Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++++.++.|++.|+++.++|+-...+. .+-+.+++.. +.+++. . . |+--..+.+.+.- ..+.||
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~~l~v 155 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGLVI 155 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SSEEEE
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccccCCCHHHHHHHHHHcCC--CCeEEE
Confidence 5679999999999999999999998766554 5678899863 123322 1 1 3333344444432 358999
Q ss_pred cCCcccHHHHHhCCeeEEeCCChHHHHhhcCE
Q 002310 795 GDGINDAAALASSHIGVAMGGGVGAASEVASV 826 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIamg~gt~~a~~aADi 826 (937)
||..+|..|-++|++=...-.+..-.++.-||
T Consensus 156 gDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 156 GDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp ESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred eCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 99999999999998775444566666665553
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.67 E-value=0.007 Score=55.46 Aligned_cols=89 Identities=12% Similarity=0.119 Sum_probs=62.2
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHH-------HcCCCCceeEec------cChhhHHHHHHHH
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKN----SAEYVAS-------LVGIPKDKVLSG------VKPNEKKRFINEL 784 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~----tA~~iA~-------~~GI~~~~v~ar------~~Pe~K~~iV~~L 784 (937)
+|++.|++.+.++.|++.|++++++|+-+.. |...+.. ..++.....+.+ -.++-|..+.+.+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~ 113 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKH 113 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHh
Confidence 5788999999999999999999999997532 2222222 123322222222 2245677777777
Q ss_pred hcCCC-EEEEEcCCcccHHHHHhCCee
Q 002310 785 QNDEN-VVAMVGDGINDAAALASSHIG 810 (937)
Q Consensus 785 q~~G~-~VamvGDG~NDa~AL~~AdVG 810 (937)
...++ +++|+||-..|+.|.+++++=
T Consensus 114 ~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 114 IAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp TTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 66554 568899999999999998763
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.08 E-value=0.0037 Score=61.75 Aligned_cols=54 Identities=13% Similarity=0.191 Sum_probs=39.9
Q ss_pred CCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 002310 703 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL 760 (937)
Q Consensus 703 ~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~ 760 (937)
|..++.+..||+++- =...+-+.++++|++|++.|+ ++++||-+...+.....+
T Consensus 2 ~~kl~~fDlDGTLl~---~~~~i~~~~~~al~~l~~~g~-~~i~Tgr~~~~~~~~~~~ 55 (243)
T d2amya1 2 GPALCLFDVDGTLTA---PRQKITKEMDDFLQKLRQKIK-IGVVGGSDFEKVQEQLGN 55 (243)
T ss_dssp CSEEEEEESBTTTBC---TTSCCCHHHHHHHHHHTTTSE-EEEECSSCHHHHHHHHCT
T ss_pred CCEEEEEcCcCCeeC---CCCcCCHHHHHHHHHHHcCCC-EEEEcCCChHHhHHHHhh
Confidence 445677788888742 244788899999999999886 678998887766554443
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=94.93 E-value=0.027 Score=54.97 Aligned_cols=119 Identities=18% Similarity=0.122 Sum_probs=71.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCC--------HHH-------HHHHHHHcCCCCceeEecc----------------
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDK--------KNS-------AEYVASLVGIPKDKVLSGV---------------- 772 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~--------~~t-------A~~iA~~~GI~~~~v~ar~---------------- 772 (937)
.+-|++.+++++|+++|+++.++|--. ... -...-++.|+.-+.++...
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPM 127 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTT
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEeccccccccccccccccc
Confidence 467899999999999999999999421 111 1223344554333333322
Q ss_pred -Ch--hhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCe-eEEeCCChHHHHhhcCEEEe-CCChhHHHHHHHHHH
Q 002310 773 -KP--NEKKRFINELQNDENVVAMVGDGINDAAALASSHI-GVAMGGGVGAASEVASVVLM-GNRLSQLLVALELSR 844 (937)
Q Consensus 773 -~P--e~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdV-GIamg~gt~~a~~aADivL~-~~~l~~l~~~i~~~R 844 (937)
.| .--.+..+.+.-.-..+.||||..+|..|-+.|.+ +|.+..|.... ..+.... -.++..+.+++....
T Consensus 128 rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~--~~~~~~~~~~~~~e~~dll~~v~ 202 (209)
T d2o2xa1 128 RKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAV--QPGFAIRPLRDSSELGDLLAAIE 202 (209)
T ss_dssp STTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEE--ETTEEEEEESSHHHHHHHHHHHH
T ss_pred ccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcc--cCCccccCccchhHHHHHHHHHH
Confidence 22 22344555555445678999999999999999998 56663332111 1232222 245666666655443
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=94.71 E-value=0.024 Score=55.14 Aligned_cols=103 Identities=12% Similarity=0.130 Sum_probs=70.3
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeEe-----ccChhhH--HHHHHHHhcCCCEEE
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS-----GVKPNEK--KRFINELQNDENVVA 792 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~a-----r~~Pe~K--~~iV~~Lq~~G~~Va 792 (937)
..++-|++.+.++.|++.|+++.++|+... +..+-+..|+... .+++ ...|+-+ ....+.++-..+.++
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l 166 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI 166 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhccccccccccccccccccccChHHHHHHHHHcCCCCceEE
Confidence 456789999999999999999999998754 5678888898531 1111 1233322 334444444456799
Q ss_pred EEcCCcccHHHHHhCCe-eEEeCCChHHHHhhcCEEE
Q 002310 793 MVGDGINDAAALASSHI-GVAMGGGVGAASEVASVVL 828 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdV-GIamg~gt~~a~~aADivL 828 (937)
||||..+|..+-+.|.+ .|+++.+. ....++.++
T Consensus 167 ~VgD~~~di~~A~~aG~~~i~v~~~~--~~~~~~~~~ 201 (221)
T d1o08a_ 167 GLEDSQAGIQAIKDSGALPIGVGRPE--DLGDDIVIV 201 (221)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESCHH--HHCSSSEEE
T ss_pred EEecCHHHHHHHHHcCCEEEEECChh--hcccccEEc
Confidence 99999999999999986 45554432 233456655
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.69 E-value=0.045 Score=53.09 Aligned_cols=114 Identities=16% Similarity=0.232 Sum_probs=78.6
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc---eeEe-------ccChhh--HHHHHHHHhcCCCE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---KVLS-------GVKPNE--KKRFINELQNDENV 790 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~---~v~a-------r~~Pe~--K~~iV~~Lq~~G~~ 790 (937)
..+.+++.+.+++|+ .+..++|+-....+..+-+++|+.+- .+++ +..|+- =....+.+.-....
T Consensus 84 ~~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~ 160 (222)
T d2fdra1 84 VKIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDR 160 (222)
T ss_dssp CCBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGG
T ss_pred cchhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccceeecccccccccccccCHHHHHHHHHhhCCCCce
Confidence 357788888887765 45679999999999999999999632 2222 123432 24455555555578
Q ss_pred EEEEcCCcccHHHHHhCCee-EEeCCCh--------HHHHhhcCEEEeCCChhHHHHHHH
Q 002310 791 VAMVGDGINDAAALASSHIG-VAMGGGV--------GAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdVG-Iamg~gt--------~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+.||||..+|..+-+.|++- |++..+. +.....+|+++ +++..|+.++.
T Consensus 161 ~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 161 VVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred EEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHHH
Confidence 99999999999999999973 4553332 12223489998 56887777764
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.64 E-value=0.028 Score=54.50 Aligned_cols=115 Identities=16% Similarity=0.166 Sum_probs=81.3
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeE-ec----cCh--hhHHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SG----VKP--NEKKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~-ar----~~P--e~K~~iV~~Lq~~G~~Vam 793 (937)
..+.+++.++++.|++.|+++.++|.-.......+-+..++.. +.++ +. ..| +-=..+++.+.-....++|
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l~ 171 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF 171 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceEEE
Confidence 3456899999999999999999999999999999999888753 1222 21 123 3334455555545568999
Q ss_pred EcCCcccHHHHHhCCeeEE-eC---CChHHHHhhcCEEEeCCChhHHHHH
Q 002310 794 VGDGINDAAALASSHIGVA-MG---GGVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVGIa-mg---~gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
|||..+|+-+-++|++--. +. ...+-....+|.++ ++|..|+++
T Consensus 172 VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~l 219 (220)
T d1zrna_ 172 VASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVEL 219 (220)
T ss_dssp EESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTT
T ss_pred EecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHhh
Confidence 9999999999999987643 32 12222234578877 568877654
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.57 E-value=0.033 Score=54.26 Aligned_cols=118 Identities=21% Similarity=0.276 Sum_probs=87.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccC------------------------------
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVK------------------------------ 773 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~------------------------------ 773 (937)
.+-||+.++++.+++. +..+++|---.+-.+++|+.+|++-+..+.+++
T Consensus 81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~ 159 (308)
T d1y8aa1 81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF 159 (308)
T ss_dssp CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHH
Confidence 4568999999999987 788889888899999999999995321111211
Q ss_pred -----------------------hhhHHHHHHHHhc-CC-CEEEEEcCCcccHHHHHhCCe--eEEeC-CChHHHHhhcC
Q 002310 774 -----------------------PNEKKRFINELQN-DE-NVVAMVGDGINDAAALASSHI--GVAMG-GGVGAASEVAS 825 (937)
Q Consensus 774 -----------------------Pe~K~~iV~~Lq~-~G-~~VamvGDG~NDa~AL~~AdV--GIamg-~gt~~a~~aAD 825 (937)
-..|..+++..-+ .+ ..-++|||.+.|..+|+.|.= |+|+. +|.+=+...||
T Consensus 160 e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA~ 239 (308)
T d1y8aa1 160 RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHAD 239 (308)
T ss_dssp HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTCS
T ss_pred HHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccccccc
Confidence 1233333332111 11 124789999999999998854 88887 89999999999
Q ss_pred EEEeCCChhHHHHHHHH
Q 002310 826 VVLMGNRLSQLLVALEL 842 (937)
Q Consensus 826 ivL~~~~l~~l~~~i~~ 842 (937)
|.+.+.+...+..++++
T Consensus 240 VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 240 VVIISPTAMSEAKVIEL 256 (308)
T ss_dssp EEEECSSTHHHHHHHHH
T ss_pred eEEeccchhHHHHHHHH
Confidence 99999998888777775
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.02 E-value=0.018 Score=55.80 Aligned_cols=85 Identities=21% Similarity=0.438 Sum_probs=63.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHcCCCCc----eeEeccCh--hhHHHHHHHHhcCCCEEEEE
Q 002310 725 IRDDAAHVVNSLSSQGIGVYMLSGDK----KNSAEYVASLVGIPKD----KVLSGVKP--NEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 725 lr~~a~e~I~~L~~aGI~v~mlTGD~----~~tA~~iA~~~GI~~~----~v~ar~~P--e~K~~iV~~Lq~~G~~Vamv 794 (937)
+.|++.+.++.+++.|++|..+||-. ..|++++-+.+|++.. .++.+-.| +.|.+.|+. .++++++
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik~----y~I~l~~ 162 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQD----KNIRIFY 162 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHH----TTEEEEE
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHHHH----cCeEEEe
Confidence 56899999999999999999999853 4577788888999422 33443322 345555543 4689999
Q ss_pred cCCcccHHHHHhCCe-eEEe
Q 002310 795 GDGINDAAALASSHI-GVAM 813 (937)
Q Consensus 795 GDG~NDa~AL~~AdV-GIam 813 (937)
||..+|..+..+|++ +|-+
T Consensus 163 GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 163 GDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp ESSHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHhHHHHcCCCceEe
Confidence 999999999998884 4544
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.00 E-value=0.036 Score=53.62 Aligned_cols=98 Identities=11% Similarity=0.180 Sum_probs=69.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcC----CCHHHHHHHHHHcCCCC--ceeEe-------ccChhhHHHHHHHHhcCCCE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSG----DKKNSAEYVASLVGIPK--DKVLS-------GVKPNEKKRFINELQNDENV 790 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTG----D~~~tA~~iA~~~GI~~--~~v~a-------r~~Pe~K~~iV~~Lq~~G~~ 790 (937)
.+++++.+.++.|+++|+++.++|+ .............|+.+ +.+++ .-.|+--...++.++-....
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~~ 176 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNE 176 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTTS
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCcce
Confidence 4679999999999999999999995 33444555556666642 12222 12455566677777766677
Q ss_pred EEEEcCCcccHHHHHhCCe-eEEeCCChHHHH
Q 002310 791 VAMVGDGINDAAALASSHI-GVAMGGGVGAAS 821 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdV-GIamg~gt~~a~ 821 (937)
+.||||..+|..+-++|.+ +|-+..+.+...
T Consensus 177 ~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~ 208 (222)
T d1cr6a1 177 VVFLDDFGSNLKPARDMGMVTILVHNTASALR 208 (222)
T ss_dssp EEEEESSSTTTHHHHHHTCEEEECCSSSHHHH
T ss_pred EEEEECCHHHHHHHHHcCCEEEEECCcchHHH
Confidence 9999999999999999997 555555554433
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=93.44 E-value=0.072 Score=53.11 Aligned_cols=52 Identities=13% Similarity=0.201 Sum_probs=37.3
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV 761 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~ 761 (937)
.+++..||+++ -.+..=+++.++|+.|++.|++++++|+....+...+++++
T Consensus 4 ~v~fDlDGTL~----~~~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 4 GYLIDLDGTIY----LGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp EEEECCBTTTE----ETTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred EEEEcCCCccE----eCCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 34555566542 12333388999999999999999999987766666666543
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=93.05 E-value=0.21 Score=49.72 Aligned_cols=61 Identities=21% Similarity=0.269 Sum_probs=39.9
Q ss_pred HHHHHHhcCCCEEEEEcCCc-ccHHHHHhCCe-eEEeCCC--hHHHHhh----cCEEEeCCChhHHHHHHH
Q 002310 779 RFINELQNDENVVAMVGDGI-NDAAALASSHI-GVAMGGG--VGAASEV----ASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 779 ~iV~~Lq~~G~~VamvGDG~-NDa~AL~~AdV-GIamg~g--t~~a~~a----ADivL~~~~l~~l~~~i~ 841 (937)
...+.+.-....++||||.. ||..+-++|.+ +|.+..| .....+. .|+++ +++..|.++++
T Consensus 193 ~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l~ 261 (261)
T d1vjra_ 193 VISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAVQ 261 (261)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHHC
T ss_pred HHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHhC
Confidence 33444433456799999996 69999999997 6666432 2221122 48887 57888887763
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=92.70 E-value=0.034 Score=51.90 Aligned_cols=88 Identities=16% Similarity=0.193 Sum_probs=56.7
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCC--------HHHH-------HHHHHHcCCCCcee-Eecc-----------Chhh
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDK--------KNSA-------EYVASLVGIPKDKV-LSGV-----------KPNE 776 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~--------~~tA-------~~iA~~~GI~~~~v-~ar~-----------~Pe~ 776 (937)
.+-|++.++++.|++.|+++.++|.-. .... ...-...|+..+.+ +|-. .|+-
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~~ 109 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKL 109 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSGG
T ss_pred eECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccccccccccccHH
Confidence 456899999999999999999999642 2222 23445566644333 2211 2222
Q ss_pred HHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 002310 777 KKRFINELQNDENVVAMVGDGINDAAALASSHIGV 811 (937)
Q Consensus 777 K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGI 811 (937)
=.++++.+.-.-..+.||||...|..|-++|.+--
T Consensus 110 ~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~ 144 (161)
T d2fpwa1 110 VERYLAEQAMDRANSYVIGDRATDIQLAENMGING 144 (161)
T ss_dssp GGGGC----CCGGGCEEEESSHHHHHHHHHHTSEE
T ss_pred HHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeE
Confidence 23444555444567999999999999999888753
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=91.56 E-value=0.32 Score=47.23 Aligned_cols=115 Identities=17% Similarity=0.137 Sum_probs=79.1
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeEe-c----cChhh--HHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS-G----VKPNE--KKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~a-r----~~Pe~--K~~iV~~Lq~~G~~Vam 793 (937)
.++-+++.+++++|+ ++++.++|..+...+..+-+..|+... .+++ . ..|+- =..+++.+.-....+.|
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~ 169 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF 169 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhhEEE
Confidence 456789999999886 688999999999999999999998531 2322 2 13432 24455555545567999
Q ss_pred EcCCcccHHHHHhCCee-EEeC-CChH-HH------------------------HhhcCEEEeCCChhHHHHHHH
Q 002310 794 VGDGINDAAALASSHIG-VAMG-GGVG-AA------------------------SEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVG-Iamg-~gt~-~a------------------------~~aADivL~~~~l~~l~~~i~ 841 (937)
|||..+|..+-++|.+- |.+. .+.. .. ....|+++ +++..|+.+++
T Consensus 170 VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i--~~l~el~~lv~ 242 (245)
T d1qq5a_ 170 VSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV--PALGDLPRLVR 242 (245)
T ss_dssp EESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE--SSGGGHHHHHH
T ss_pred EeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEE--CCHHHHHHHHH
Confidence 99999999999999863 3332 1111 01 11368888 57999988876
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.18 E-value=0.042 Score=52.84 Aligned_cols=95 Identities=13% Similarity=0.145 Sum_probs=61.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHH----HHHHHHcCCCC--ceeEec-----cCh--hhHHHHHHHHhcCCCE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSA----EYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENV 790 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA----~~iA~~~GI~~--~~v~ar-----~~P--e~K~~iV~~Lq~~G~~ 790 (937)
.+.+++.+.++.|++.|++++++|....... ...-...++.. +.+++. ..| +-=..+++.+.-....
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~e 178 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE 178 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccCccc
Confidence 4679999999999999999999996543322 22222333321 233332 233 3334455555544467
Q ss_pred EEEEcCCcccHHHHHhCCe-eEEeCCChH
Q 002310 791 VAMVGDGINDAAALASSHI-GVAMGGGVG 818 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdV-GIamg~gt~ 818 (937)
++||||...|..+-++|++ +|.+.++.+
T Consensus 179 ~l~VgD~~~Di~~A~~~G~~ti~v~~~~~ 207 (225)
T d1zd3a1 179 VVFLDDIGANLKPARDLGMVTILVQDTDT 207 (225)
T ss_dssp EEEEESCHHHHHHHHHTTCEEEECSSHHH
T ss_pred eeEEecCHHHHHHHHHcCCEEEEECCcch
Confidence 8899999999999999999 666654433
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=89.11 E-value=0.28 Score=48.53 Aligned_cols=42 Identities=17% Similarity=0.290 Sum_probs=31.1
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCH
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKK 751 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~ 751 (937)
.+.+..||+++ -.+.+=|++.++|+.|+++|++++.+|+...
T Consensus 5 ~VifDlDGTL~----~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~ 46 (250)
T d2c4na1 5 NVICDIDGVLM----HDNVAVPGAAEFLHGIMDKGLPLVLLTNYPS 46 (250)
T ss_dssp EEEEECBTTTE----ETTEECTTHHHHHHHHHHTTCCEEEEESCCS
T ss_pred EEEEECCCeeE----ECCCcCccHHHHHHHHHHCCCcEEEEeCCCC
Confidence 45566677652 2344447899999999999999999996543
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=88.64 E-value=0.3 Score=48.32 Aligned_cols=50 Identities=10% Similarity=0.159 Sum_probs=34.5
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS 759 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~ 759 (937)
.+.+..||++. -.+.+=|++.++|+.|++.|++++++|.....+...+++
T Consensus 4 ~vlFDlDGTL~----~~~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~ 53 (253)
T d1wvia_ 4 GYLIDLDGTIY----KGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQE 53 (253)
T ss_dssp EEEEECBTTTE----ETTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHH
T ss_pred EEEEcCcCceE----ECCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHH
Confidence 45566666652 233334899999999999999999999754444444443
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=87.30 E-value=1.5 Score=42.74 Aligned_cols=19 Identities=21% Similarity=0.073 Sum_probs=15.8
Q ss_pred CCChHHHHHHHHHhcCCcc
Q 002310 632 VHPIGKAIVEAAEFSNCQN 650 (937)
Q Consensus 632 ~hP~~~Ai~~~a~~~~~~~ 650 (937)
.+|.+.|++.++.+.++..
T Consensus 78 G~pTE~ALl~~a~k~g~~~ 96 (239)
T d1wpga3 78 GEATETALTTLVEKMNVFN 96 (239)
T ss_dssp SCHHHHHHHHHHHHHCTTC
T ss_pred CCCCcHHHHHHHHHhCCCh
Confidence 5799999999998877653
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=86.25 E-value=0.14 Score=47.45 Aligned_cols=94 Identities=14% Similarity=0.228 Sum_probs=62.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc-CCCC--ceeEec-----cChhhH--HHHHHHHhcCCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV-GIPK--DKVLSG-----VKPNEK--KRFINELQNDENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~-GI~~--~~v~ar-----~~Pe~K--~~iV~~Lq~~G~~Vam 793 (937)
++.+++.+.++.+++.|+++.++|+-....+...-.+. |+.. +.+++. -.|+.+ ..+.+.+.-....+.|
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l~ 163 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVF 163 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEEE
Confidence 46889999999999999999999876544443322222 3311 133322 234433 3444555445568999
Q ss_pred EcCCcccHHHHHhCCe-eEEeCCCh
Q 002310 794 VGDGINDAAALASSHI-GVAMGGGV 817 (937)
Q Consensus 794 vGDG~NDa~AL~~AdV-GIamg~gt 817 (937)
|||..+|..+-++|++ +|.+....
T Consensus 164 vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 164 FDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp EESCHHHHHHHHTTTCEEEECCSTT
T ss_pred EeCCHHHHHHHHHcCCEEEEECCCC
Confidence 9999999999999997 66665433
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=86.25 E-value=0.5 Score=51.53 Aligned_cols=93 Identities=14% Similarity=0.087 Sum_probs=63.5
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhccccccc
Q 002310 831 NRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSK 910 (937)
Q Consensus 831 ~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~ 910 (937)
.++..+.. +||.++.+++|.+.|.++.|+..+...+...+ ++ .-.|+-+..+...+-+...+-|+.|.. .++
T Consensus 219 r~L~avE~---~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~--l~-~p~pl~~~qILwinli~d~lpaiaL~~--ep~ 290 (472)
T d1wpga4 219 RSLPSVET---LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAA--LG-LPEALIPVQLLWVNLVTDGLPATALGF--NPP 290 (472)
T ss_dssp SCTTHHHH---HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--SC-CCCSCCHHHHHHHHHTTTHHHHHHHTT--CCC
T ss_pred hhHHHHHH---HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHH--cC-CCccccHHHHHHHHHHhHHHHHHHHhc--CCC
Confidence 46776665 59999999999999999999865544332211 22 112444445556666666667766654 455
Q ss_pred cccccCCCCCCcccccccccc
Q 002310 911 QKASFQAPSSRVNSNVDSHQL 931 (937)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~ 931 (937)
+++.+++||++.+....+..+
T Consensus 291 d~~iM~~~Pr~~~~~li~~~~ 311 (472)
T d1wpga4 291 DLDIMDRPPRSPKEPLISGWL 311 (472)
T ss_dssp CSGGGGSCCCCTTCCSSCTHH
T ss_pred chhhhcCCCCCCCccccCHHH
Confidence 566899999999988887765
|