Citrus Sinensis ID: 002339
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 934 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LNQ4 | 1216 | Putative phospholipid-tra | yes | no | 0.985 | 0.756 | 0.727 | 0.0 | |
| Q9SGG3 | 1228 | Putative phospholipid-tra | no | no | 0.989 | 0.752 | 0.714 | 0.0 | |
| Q9LVK9 | 1243 | Putative phospholipid-tra | no | no | 0.978 | 0.735 | 0.721 | 0.0 | |
| Q9SLK6 | 1240 | Phospholipid-transporting | no | no | 0.980 | 0.738 | 0.714 | 0.0 | |
| Q9LI83 | 1202 | Phospholipid-transporting | no | no | 0.957 | 0.743 | 0.582 | 0.0 | |
| Q9SX33 | 1200 | Putative phospholipid-tra | no | no | 0.966 | 0.752 | 0.583 | 0.0 | |
| Q9SAF5 | 1203 | Putative phospholipid-tra | no | no | 0.970 | 0.753 | 0.575 | 0.0 | |
| P57792 | 1184 | Putative phospholipid-tra | no | no | 0.966 | 0.762 | 0.565 | 0.0 | |
| Q9LK90 | 1189 | Putative phospholipid-tra | no | no | 0.963 | 0.756 | 0.550 | 0.0 | |
| Q9XIE6 | 1213 | Phospholipid-transporting | no | no | 0.915 | 0.704 | 0.484 | 0.0 |
| >sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1431 bits (3703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 678/932 (72%), Positives = 792/932 (84%), Gaps = 12/932 (1%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGS--VQG--CPRVIYCNQPHMHKKRPLKYCT 56
M RGRIR+KLR S +YTF CLRP +E + +QG R +YCNQPHMHKK+PLKY +
Sbjct: 1 MARGRIRSKLRLSHIYTFGCLRPSADEGQDPHPIQGPGFSRTVYCNQPHMHKKKPLKYRS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
NY+STT+YN ++FPK L+EQF+R AN YFL+AA+LSV PLSPF+ SM+ PL VVG+S
Sbjct: 61 NYVSTTRYNLITFFPKCLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
M KEALEDW RFMQD ++NA KV VH +G F + W+KI VGDIVKVEKD FFPADLL
Sbjct: 121 MLKEALEDWSRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LSSSYEDGICYVETMNLDGETNLKVKR++E T L++ ++FK+FTG ++CE+PNPSLYTF
Sbjct: 181 LSSSYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
VGN+EY+R+++ +DPSQILLRDSKLRNT +VYG V+FTGHD+KVMQN+T SPSKRS IEK
Sbjct: 241 VGNLEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEK 300
Query: 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
MD II+ L +L+LIS ISS GFA + + P+WWYL+P+E + NP P+ G HL
Sbjct: 301 TMDYIIYTLLVLLILISCISSSGFAWETKFHMPKWWYLRPEEPENLTNPSNPVYAGFVHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TAL+LYGYLIPISLYVSIE+VK LQA FIN+D+ MYD ESG+PA ARTSNLNEELGQVD
Sbjct: 361 ITALLLYGYLIPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQVD 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESA-NAKHK 475
TILSDKTGTLTCNQMDFLKCS+AGT+YGV SEVE+AAA+QMA+DL+E S+ + +
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTPR 480
Query: 476 NSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535
+IE+E+ IT + IKGF FED RLMDGNWL+EP+ D +LLFFRILAICHT
Sbjct: 481 AQARDIEVESSITP------RIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHT 534
Query: 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREF 595
AIPELNEETG TYEAESPDEA+FL AA EFGF F++RTQSSV++ ER GQ +ERE+
Sbjct: 535 AIPELNEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREY 594
Query: 596 KILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYG 655
K+LNLLDFTSKRKRMSV+VRDE+GQILLLCKGADSIIF+RL+KNG++Y TTK LNEYG
Sbjct: 595 KVLNLLDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYG 654
Query: 656 EAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAV 715
EAGLRTLAL+Y++LDE EYSAWN+EF KAK+SIG+DR+ LE +SDM+EKDLILVGATAV
Sbjct: 655 EAGLRTLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAV 714
Query: 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV 775
EDKLQKGVPQCIDKLAQAGLK+WVLTGDKMETAINIG++CSLLRQGMKQICIT +NS+
Sbjct: 715 EDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSEGA 774
Query: 776 GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVE 835
+ AK AVKDNIL QIT A QM+KLE+DPHAA+ALII+GKTL YALED+MK+ FL LAV+
Sbjct: 775 SQDAK-AVKDNILNQITKAVQMVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALAVD 833
Query: 836 CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAV 895
CASVICCRVSPKQKALVTRLVKEGTGK TLAIGDGANDVGMIQEADIG+GISGVEGMQAV
Sbjct: 834 CASVICCRVSPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQAV 893
Query: 896 MASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
MASDFSIAQFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 894 MASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 925
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1415 bits (3663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/940 (71%), Positives = 793/940 (84%), Gaps = 16/940 (1%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGS--VQG--CPRVIYCNQPHMHKKRPLKYCT 56
M RGRIR+KLR S LYTF CLRP E + S +QG R ++CNQPHMHKK+PL+Y +
Sbjct: 1 MARGRIRSKLRLSLLYTFGCLRPATLEGQDSQPIQGPGFSRTVFCNQPHMHKKKPLRYRS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
NY+STT+YN ++FPK+L+EQF+R AN+YFL+AA+LSV PLSPF+ SM+ PL VVG+S
Sbjct: 61 NYVSTTRYNLITFFPKSLYEQFHRAANLYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
M KEALEDWRRFMQD ++NARK VH +GVF + W+K+ VGDIVKVEKD+FFPADLL
Sbjct: 121 MLKEALEDWRRFMQDVKINARKTCVHKSDGVFRQRKWKKVSVGDIVKVEKDEFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LSSSYEDGICYVETMNLDGETNLKVKR++E + PL++DE+FK F T++CE+PNP+LYTF
Sbjct: 181 LSSSYEDGICYVETMNLDGETNLKVKRSLEVSLPLDDDESFKNFMATIRCEDPNPNLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
VGN+E++R+ + +DPSQILLRDSKLRNT +VYG V+FTG D+KVMQN+T SPSKRS IE+
Sbjct: 241 VGNLEFERQTFPLDPSQILLRDSKLRNTTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIER 300
Query: 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
MD II+ L +L+LIS ISS GFA + + P+ WYL+P E + NP P+ G+ HL
Sbjct: 301 TMDYIIYTLLVLLILISCISSSGFAWETEFHMPKMWYLRPGEPIDFTNPINPIYAGVVHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TAL+LYGYLIPISLYVSIE+VK QA FINQD+ MYDDESG+PA ARTSNLNEELGQV
Sbjct: 361 ITALLLYGYLIPISLYVSIEVVKVWQASFINQDLHMYDDESGVPANARTSNLNEELGQVH 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHK- 475
TILSDKTGTLTCNQMDFLKCS+AGT+YGV SEVE+AAAKQMA+DLEE S+ + +
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQT 480
Query: 476 --------NSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFF 527
+ EIE+E N+ N + IKGF FED+RLM+GNWL+E + +L FF
Sbjct: 481 KVYGTWDSSRTQEIEVEG---DNNYNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFF 537
Query: 528 RILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPK 587
RILAICHTAIPELNEETG TYEAESPDEA+FL AAREFGFEF++RTQSSVFIRER+
Sbjct: 538 RILAICHTAIPELNEETGKYTYEAESPDEASFLAAAREFGFEFFKRTQSSVFIRERFSGS 597
Query: 588 GQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEAT 647
GQ +ERE+K+LNLL+FTSKRKRM+VIVRDE+GQILLLCKGADSIIF+RL+KNG+ Y T
Sbjct: 598 GQIIEREYKVLNLLEFTSKRKRMTVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPT 657
Query: 648 TKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDL 707
T+ L EYGEAGLRTLALAY++LDE EY+AWNSEF KAK+SIG+DR+ LE +DM+EK+L
Sbjct: 658 TRHLTEYGEAGLRTLALAYRKLDEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKEL 717
Query: 708 ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICI 767
IL+GATAVEDKLQKGVPQCIDKLAQAGLK+WVLTGDKMETAINIGFACSLLRQGM+QICI
Sbjct: 718 ILIGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICI 777
Query: 768 TALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKH 827
T++NS+ + +K VK+NIL Q+T A QM+KLE+DPHAA+ALII+GKTL YALEDDMK+
Sbjct: 778 TSMNSEGGSQDSKRVVKENILNQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALEDDMKY 837
Query: 828 HFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887
FL LAV+CASVICCRVSPKQKALV RLVKEGTGKTTLAIGDGANDVGMIQEADIG+GIS
Sbjct: 838 QFLALAVDCASVICCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGIS 897
Query: 888 GVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
GVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 898 GVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 937
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 1411 bits (3652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 675/935 (72%), Positives = 781/935 (83%), Gaps = 21/935 (2%)
Query: 12 RSQLYTFACLRPHVNETEG----SVQGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFF 67
+S YTF CLRP E +G + G R+++CNQPH+H + L+Y +NY+STT+YN
Sbjct: 12 KSHFYTFKCLRPKTLEDQGPHIINGPGYTRIVHCNQPHLHLAKVLRYTSNYVSTTRYNLI 71
Query: 68 SYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127
++ PK L+EQF+RVAN YFL+AA+LSV PLSPF+ SM+ PL VVG+SM KEALEDWRR
Sbjct: 72 TFLPKCLYEQFHRVANFYFLVAAILSVFPLSPFNKWSMIAPLIFVVGLSMGKEALEDWRR 131
Query: 128 FMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICY 187
FMQD +VN+RK +VH G+G F + W+K++VGD+VKVEKDQFFPADLL LSSSYEDGICY
Sbjct: 132 FMQDVKVNSRKATVHRGDGDFGRRKWKKLRVGDVVKVEKDQFFPADLLLLSSSYEDGICY 191
Query: 188 VETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELY 247
VETMNLDGETNLKVKR ++ T PL D+ F+ F+GT+KCE+PNP+LYTFVGN+EYD ++Y
Sbjct: 192 VETMNLDGETNLKVKRCLDVTLPLERDDTFQSFSGTIKCEDPNPNLYTFVGNLEYDGQVY 251
Query: 248 AIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFA 307
+DPSQILLRDSKLRNT++VYG V+FTGHD+KVMQN+T SPSKRS IEK+MD II+ LFA
Sbjct: 252 PLDPSQILLRDSKLRNTSYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFA 311
Query: 308 ILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLI 367
+LVL+S ISS+GFAV WWYL+P + + NP P + HL+TA++LYGYLI
Sbjct: 312 LLVLVSFISSLGFAVMTKMHMGDWWYLRPDKPERLTNPRNPFHAWVVHLITAVLLYGYLI 371
Query: 368 PISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLT 427
PISLYVSIE+VK LQA FINQD+ MYD ESG PAQARTSNLNEELGQVDTILSDKTGTLT
Sbjct: 372 PISLYVSIELVKVLQATFINQDLQMYDSESGTPAQARTSNLNEELGQVDTILSDKTGTLT 431
Query: 428 CNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSG--------- 478
CNQMDFLKCS+AGT+YGV SEVELAAAKQMAIDL+E+ E + G
Sbjct: 432 CNQMDFLKCSIAGTSYGVRASEVELAAAKQMAIDLDEEQGEEVTHLPRTRGRMHGYAKMP 491
Query: 479 ----SEIELETVITSNDGNDFKRR--IKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAI 532
S+IELETVIT+ D D + IKGF+FED RLM GNWL EPN D +L+F RILA+
Sbjct: 492 SKTSSDIELETVITATDEGDQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDILMFLRILAV 551
Query: 533 CHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVE 592
CHTAIPE++E+TG TYEAESPDE AFLVAA EFGFEF +RTQSSVFI ER+ GQPVE
Sbjct: 552 CHTAIPEVDEDTGKCTYEAESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH--SGQPVE 609
Query: 593 REFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLN 652
RE+K+LN+LDFTSKRKRMSVIVRDE GQILLLCKGADSIIF+RLSKNG+ Y EAT+K LN
Sbjct: 610 REYKVLNVLDFTSKRKRMSVIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEATSKHLN 669
Query: 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGA 712
YGEAGLRTLAL+Y++LDE+EYS WNSEF KAK+S+GADR+ LE VSDMMEK+LILVGA
Sbjct: 670 GYGEAGLRTLALSYRKLDETEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGA 729
Query: 713 TAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNS 772
TAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG+ACSLLRQGMKQI I N
Sbjct: 730 TAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIYIALRNE 789
Query: 773 DSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGL 832
+ + + A ++NILMQI NASQMIKLE+DPHAA+ALII+GKTL YALEDD+K+ FL L
Sbjct: 790 EGSSQDPEAAARENILMQIINASQMIKLEKDPHAAFALIIDGKTLTYALEDDIKYQFLAL 849
Query: 833 AVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGM 892
AV+CASVICCRVSPKQKALVTRL KEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEGM
Sbjct: 850 AVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGM 909
Query: 893 QAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
QAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 910 QAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 944
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SLK6|ALA6_ARATH Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1405 bits (3636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 668/935 (71%), Positives = 789/935 (84%), Gaps = 19/935 (2%)
Query: 12 RSQLYTFACLRPHVNETEG----SVQGCPRVIYCNQPHMH-KKRPLKYCTNYISTTKYNF 66
+S YTF CLRP + +G + G R+++CNQPH+H + ++Y +NY+STT+YN
Sbjct: 12 KSHFYTFRCLRPKTLDDQGPHVINGPGYTRIVHCNQPHLHLATKLIRYRSNYVSTTRYNL 71
Query: 67 FSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126
++ PK L+EQF+RVAN YFL+AA+LSV PLSPF+ SM+ PL VVG+SM KEALEDWR
Sbjct: 72 LTFLPKCLYEQFHRVANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMGKEALEDWR 131
Query: 127 RFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGIC 186
RFMQD EVN+RK SVH G+G F + W++I+VGDIV+VEKD+FFPADLL LSSSYEDGIC
Sbjct: 132 RFMQDVEVNSRKASVHKGSGDFGRRTWKRIRVGDIVRVEKDEFFPADLLLLSSSYEDGIC 191
Query: 187 YVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDREL 246
YVETMNLDGETNLKVKR ++AT L +DE+F+ F+GT+KCE+PNP+LYTFVGN+E D ++
Sbjct: 192 YVETMNLDGETNLKVKRCLDATLALEKDESFQNFSGTIKCEDPNPNLYTFVGNLECDGQV 251
Query: 247 YAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILF 306
Y +DP+QILLRDSKLRNTA+VYG V+FTGHD+KVMQN+T SPSKRS IEK+MD II+ LF
Sbjct: 252 YPLDPNQILLRDSKLRNTAYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLF 311
Query: 307 AILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYL 366
A+L+ +S ISS+GFAV +WWYL+P + + NP PL + HL+TAL+LYGYL
Sbjct: 312 ALLLTVSFISSLGFAVMTKLLMAEWWYLRPDKPESLTNPTNPLYAWVVHLITALLLYGYL 371
Query: 367 IPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTL 426
IPISLYVSIE+VK LQA FINQD+ +YD ESG PAQARTSNLNEELGQVDTILSDKTGTL
Sbjct: 372 IPISLYVSIEVVKVLQAHFINQDLQLYDSESGTPAQARTSNLNEELGQVDTILSDKTGTL 431
Query: 427 TCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN---------- 476
TCNQMDFLKCS+AGT+YGV SEVELAAAKQMA+DLEE+ E AN
Sbjct: 432 TCNQMDFLKCSIAGTSYGVRASEVELAAAKQMAMDLEEKGEEVANLSMNKGRTQRYAKLA 491
Query: 477 --SGSEIELETVITSNDGNDFKRR--IKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAI 532
+ S+ ELETV+T++D D K+ +KGF+FED+RLM+ NWL EPN D +L+FFRILA+
Sbjct: 492 SKTSSDFELETVVTASDEKDQKQNTGVKGFSFEDNRLMNENWLNEPNSDDILMFFRILAV 551
Query: 533 CHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVE 592
CHTAIPE++E+TG TYEAESPDE AFLVA+REFGFEF +RTQSSVFI ER+ GQPV+
Sbjct: 552 CHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEFTKRTQSSVFIAERFSSSGQPVD 611
Query: 593 REFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLN 652
RE+KILNLLDFTSKRKRMS IVRDE+GQILLLCKGADSIIF+RLSK+G+ Y AT+K LN
Sbjct: 612 REYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADSIIFERLSKSGKEYLGATSKHLN 671
Query: 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGA 712
YGEAGLRTLAL Y++LDE+EY+AWNSEF KAK+S+GADR+ LE VSDMMEK+LILVGA
Sbjct: 672 VYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGA 731
Query: 713 TAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNS 772
TAVEDKLQKGVPQCID LAQAGLKIWVLTGDKMETAINIG+ACSLLRQGMKQI I+ N
Sbjct: 732 TAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQISISLTNV 791
Query: 773 DSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGL 832
+ + ++ A K++ILMQITNASQMIK+E+DPHAA+ALII+GKTL YAL+DD+K+ FL L
Sbjct: 792 EESSQNSEAAAKESILMQITNASQMIKIEKDPHAAFALIIDGKTLTYALKDDVKYQFLAL 851
Query: 833 AVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGM 892
AV+CASVICCRVSPKQKALVTRL KEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEGM
Sbjct: 852 AVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGM 911
Query: 893 QAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
QAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 912 QAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 946
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LI83|ALA10_ARATH Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1119 bits (2894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/937 (58%), Positives = 695/937 (74%), Gaps = 43/937 (4%)
Query: 10 LRRSQLYTFACLRPHVNETEGSV--QGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFF 67
L S++Y++ C + E ++ G RV+YCN+P Y NY+ +TKY
Sbjct: 11 LHLSKIYSYTCGKSSFQEDHSNIGGPGFSRVVYCNEPGSPAAERRNYAGNYVRSTKYTVA 70
Query: 68 SYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127
S+FPK+LFEQF RVAN YFL+ +LS+T LSP+ VS LLPLA+V+ +M KE +EDWRR
Sbjct: 71 SFFPKSLFEQFRRVANFYFLVTGILSLTDLSPYGAVSALLPLALVISATMVKEGIEDWRR 130
Query: 128 FMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICY 187
QD EVN RKV VH GNG+F + W ++VGDIV+VEKD+FFPADLL LSSSYED +CY
Sbjct: 131 KQQDIEVNNRKVKVHDGNGIFRQEEWRNLRVGDIVRVEKDEFFPADLLLLSSSYEDSVCY 190
Query: 188 VETMNLDGETNLKVKRAMEATSPL-NEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDREL 246
VETMNLDGETNLKVK+ +EATS L N+D FK+F G V+CE+PN +LY FVG + + E
Sbjct: 191 VETMNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEER 250
Query: 247 YAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILF 306
+ + QILLRDSKLRNT +VYG+V+FTGHD+KV+QN+T PSKRS IE+ MDKII+++F
Sbjct: 251 FPLSIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMF 310
Query: 307 AILVLISLISSIGFAV-----KINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALI 361
++ L+S + SI F V K+ + WYLKP + D++F+P + + + H TA +
Sbjct: 311 GLVFLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIYHFFTATM 370
Query: 362 LYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421
LY Y IPISLYVSIEIVK LQ+IFIN+DI MY +E+ PAQARTSNLNEELG VDTILSD
Sbjct: 371 LYSYFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEELGMVDTILSD 430
Query: 422 KTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEI 481
KTGTLTCN M+F+KCS+AG AYG +EVE A MA+ ++ GS +
Sbjct: 431 KTGTLTCNSMEFIKCSIAGKAYGRGITEVERA----MAV--------------RSGGSPL 472
Query: 482 ---ELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIP 538
+L+ V+ + ++KGFNFED R+M+GNW+++P L FFR+LA+CHTAIP
Sbjct: 473 VNEDLDVVVDQSGP-----KVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIP 527
Query: 539 ELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598
E +EE+GN++YEAESPDEAAF+VAAREFGFEF+ RTQ+ + RE G+ VER +++L
Sbjct: 528 ETDEESGNVSYEAESPDEAAFVVAAREFGFEFFNRTQNGISFRELDLVSGEKVERVYRLL 587
Query: 599 NLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658
N+L+F S RKRMSVIVRD+DG++LLL KGAD+++F+RL+KNGR +E T + +N+Y +AG
Sbjct: 588 NVLEFNSTRKRMSVIVRDDDGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAG 647
Query: 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDK 718
LRTL LAY+++DE+EY +N F +AK+S+ DREA ++ ++D ME+DLIL+GATAVEDK
Sbjct: 648 LRTLVLAYREVDENEYIEFNKSFNEAKASVSEDREALIDEITDKMERDLILLGATAVEDK 707
Query: 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKA 778
LQ GVP+CIDKLAQAG+KIWVLTGDKMETAINIGFA SLLRQ MKQI I L + +
Sbjct: 708 LQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFASSLLRQEMKQIIIN-LETPQIKSL 766
Query: 779 AKEAVKDNI--------LMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFL 830
K KD I +MQ+ ++ A+ALII+GK+L YALED++K FL
Sbjct: 767 EKSGGKDEIELASRESVVMQLQEGKALLAASGASSEAFALIIDGKSLTYALEDEIKKMFL 826
Query: 831 GLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVE 890
LA CASVICCR SPKQKALVTRLVK GTGKTTLAIGDGANDVGM+QEADIG+GISGVE
Sbjct: 827 DLATSCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVE 886
Query: 891 GMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
GMQAVM+SD +IAQFR+LERLL+VHGHWCY RIA M+
Sbjct: 887 GMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRIASMI 923
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SX33|ALA9_ARATH Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/931 (58%), Positives = 694/931 (74%), Gaps = 28/931 (3%)
Query: 10 LRRSQLYTFACLRPHVNETEGSV--QGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFF 67
L+ S+LYT C + + + G RV+YCN+P + Y NY+ TTKY
Sbjct: 13 LQLSKLYTLTCAQACFKQDHSQIGGPGFSRVVYCNEPDSPEADSRNYSDNYVRTTKYTLA 72
Query: 68 SYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127
++ PK+LFEQF RVAN YFL+ +L+ TPL+P++ S ++PL V+G +M KE +EDWRR
Sbjct: 73 TFLPKSLFEQFRRVANFYFLVTGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGVEDWRR 132
Query: 128 FMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICY 187
QD EVN RKV VH G+G F K W+ + +GDIVKVEK++FFPADL+ LSSSYED ICY
Sbjct: 133 QKQDNEVNNRKVKVHRGDGSFDAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYEDAICY 192
Query: 188 VETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELY 247
VETMNLDGETNLKVK+ +E TS L ++ FK F VKCE+PN +LY+FVG +E Y
Sbjct: 193 VETMNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKY 252
Query: 248 AIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFA 307
+ P Q+LLRDSKLRNT ++G+VIFTGHD+KV+QN+T PSKRS IEKKMDKII+++F
Sbjct: 253 PLSPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFF 312
Query: 308 ILVLISLISSIGFAVK----INYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILY 363
+++ ++ I S+ F V + + WYL+P + ++F+P + V + H +TA++LY
Sbjct: 313 MVITMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLY 372
Query: 364 GYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKT 423
Y IPISLYVSIEIVK LQ+IFINQDI MY +E+ PA+ARTSNLNEELGQVDTILSDKT
Sbjct: 373 SYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKT 432
Query: 424 GTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIEL 483
GTLTCN M+F+KCSVAGTAYG +EVE+A ++ L Q+ E+ +I++
Sbjct: 433 GTLTCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDEN----------DIDM 482
Query: 484 ETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEE 543
E S + + +KGFNF D R+M+GNW+ E + D + FFR+LA+CHT IPE++E+
Sbjct: 483 EY---SKEAITEESTVKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDED 539
Query: 544 TGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDF 603
T ++YEAESPDEAAF++AARE GFEF+ RTQ+++ +RE G+ VER +K+LN+L+F
Sbjct: 540 TEKISYEAESPDEAAFVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEF 599
Query: 604 TSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLA 663
S RKRMSVIV++EDG++LLLCKGAD+++F+RLSKNGR +EE T +NEY +AGLRTL
Sbjct: 600 NSTRKRMSVIVQEEDGKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLI 659
Query: 664 LAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGV 723
LAY++LDE EY +N +AKSS+ ADRE+ +E V++ +EKDLIL+GATAVEDKLQ GV
Sbjct: 660 LAYRELDEKEYKVFNERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGV 719
Query: 724 PQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT-------ALNSDSVG 776
P CIDKLAQAG+KIWVLTGDKMETAINIGFACSLLRQ MKQI I +L
Sbjct: 720 PDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEK 779
Query: 777 KAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVEC 836
+A K+N+L QI N +K A+ALII+GK+LAYAL+DD+KH FL LAV C
Sbjct: 780 DVIAKASKENVLSQIINGKTQLKY--SGGNAFALIIDGKSLAYALDDDIKHIFLELAVSC 837
Query: 837 ASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVM 896
ASVICCR SPKQKALVTRLVK G GKTTLAIGDGANDVGM+QEADIG+GISGVEGMQAVM
Sbjct: 838 ASVICCRSSPKQKALVTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVM 897
Query: 897 ASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
+SD +IAQFR+LERLL+VHGHWCY+RI+ M+
Sbjct: 898 SSDIAIAQFRYLERLLLVHGHWCYRRISTMI 928
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SAF5|ALA11_ARATH Putative phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/945 (57%), Positives = 691/945 (73%), Gaps = 39/945 (4%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGSV--QGCPRVIYCNQPHMHKKRPLKYCTNY 58
MT+ R R +L S +Y F + + E + G RV+YCN+P+ Y NY
Sbjct: 1 MTKCR-RRRLHLSNIYAFKGRKSNFQEDHSHIGGPGFSRVVYCNEPNSPAAERRNYVGNY 59
Query: 59 ISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMA 118
+ +TKY S+ PK+LFEQF RVAN YFL+ +LS+T LSP+SP+S LLPL V+ SM
Sbjct: 60 VRSTKYTLASFIPKSLFEQFRRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMV 119
Query: 119 KEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLS 178
KEA+EDW R QD E+N RKV VH GNG+F + W ++VG+IV+VEKD+FFPADLL LS
Sbjct: 120 KEAIEDWGRKKQDIEMNNRKVKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLS 179
Query: 179 SSYEDGICYVETMNLDGETNLKVKRAMEATS-PLNEDEAFKEFTGTVKCENPNPSLYTFV 237
SSYED ICYVETMNLDGETNLKVK+ +EATS L+ED FKE VKCE+PN LYTFV
Sbjct: 180 SSYEDSICYVETMNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFV 239
Query: 238 GNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKK 297
G + ++ + + +Q+LLRDSKLRNT ++YG V+FTGHD+KV+QN+T PSKRS IE+K
Sbjct: 240 GTLHFEEQRLPLSITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERK 299
Query: 298 MDKIIFILFAILVLISLISSIGFAVKI------NYQTPQWWYLKPKETDVYFNPGKPLVP 351
MDKII+++F ++ L+S I SI F ++ N + WYL+P D++F+P + +
Sbjct: 300 MDKIIYLMFGVVFLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMA 359
Query: 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEE 411
+ H TA++LY Y IPISLYVSIEIVK LQ++FIN DI MY +E+ PA ARTSNLNEE
Sbjct: 360 AVYHFFTAVMLYSYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEE 419
Query: 412 LGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESAN 471
LG VDTILSDKTGTLTCN M+F+KCS+AGTAYG +EVE + MA+
Sbjct: 420 LGMVDTILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVE----RSMAM----------- 464
Query: 472 AKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILA 531
+ S + V+ G +IKGFNF D R+M GNW+K+ + L FFR+LA
Sbjct: 465 -RSNGSSLVGDDLDVVVDQSGP----KIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLA 519
Query: 532 ICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPV 591
+CHTAIPE +E TG+++YEAESPDEAAF+VAAREFGFEF+ RTQ+ + RE G+ V
Sbjct: 520 VCHTAIPETDEATGSVSYEAESPDEAAFVVAAREFGFEFFSRTQNGISFRELDLASGKTV 579
Query: 592 EREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLL 651
ER +++LN+L+F S RKRMSVIVRDEDG++LLL KGAD+++F+RL+KNGR +EE T + +
Sbjct: 580 ERVYRLLNVLEFNSARKRMSVIVRDEDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHV 639
Query: 652 NEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVG 711
NEY +AGLRTL LAY+++DE+EY ++ F +AK+S+ ADRE+ ++ +++ ME+DLIL+G
Sbjct: 640 NEYADAGLRTLILAYREVDENEYIEFSKNFNEAKNSVTADRESLIDEITEQMERDLILLG 699
Query: 712 ATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT--- 768
ATAVEDKLQ GVP CIDKLAQAG+KIWVLTGDKMETAINIGFACSLLRQ MKQI I
Sbjct: 700 ATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQEMKQIIINLET 759
Query: 769 ----ALNSDSVGKAAKEAVKDNILMQITNASQMIK--LERDPHAAYALIIEGKTLAYALE 822
AL A + A +++++ Q+ ++ H A+ALII+GK+L YALE
Sbjct: 760 PHIKALEKAGEKDAIEHASRESVVNQMEEGKALLTASSSASSHEAFALIIDGKSLTYALE 819
Query: 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADI 882
DD K FL LA CASVICCR SPKQKALVTRLVK GTGKTTLAIGDGANDVGM+QEADI
Sbjct: 820 DDFKKKFLDLATGCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADI 879
Query: 883 GIGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
G+GISGVEGMQAVM+SD +IAQFR+LERLL+VHGHWCY RI+ M+
Sbjct: 880 GVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRISSMI 924
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P57792|ALA12_ARATH Putative phospholipid-transporting ATPase 12 OS=Arabidopsis thaliana GN=ALA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1095 bits (2832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/937 (56%), Positives = 700/937 (74%), Gaps = 34/937 (3%)
Query: 5 RIRAKLRRSQLYTF----ACLRPHVNETEGSVQGCPRVIYCNQPHMHKKRPLKYCTNYIS 60
R + K++ S+L+T AC +P + ++ G RV++CNQP + YC NY+
Sbjct: 8 RRKRKIQLSKLFTLTGAKACFKP--DHSKIGRSGFSRVVFCNQPDSPEAESRNYCDNYVR 65
Query: 61 TTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKE 120
TTKY ++ PK+LFEQF RVAN YFL+ +LS TPL+P++ VS ++PL V+ +M KE
Sbjct: 66 TTKYTLATFLPKSLFEQFRRVANFYFLVVGILSFTPLAPYTAVSAIVPLTFVILATMFKE 125
Query: 121 ALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSS 180
+EDWRR QD EVN RKV VH GNG F + W+ ++VGDI+KVEK++FFPADL+ LSSS
Sbjct: 126 GVEDWRRKQQDIEVNNRKVRVHRGNGNFDLREWKTLRVGDILKVEKNEFFPADLVLLSSS 185
Query: 181 YEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNI 240
YED +CYVETMNLDGETNLK+K+ +E T L E+ F++F +KCE+PN +LY+FVG +
Sbjct: 186 YEDAVCYVETMNLDGETNLKLKQGLEVTLSLREELNFRDFEAFIKCEDPNANLYSFVGTM 245
Query: 241 EYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDK 300
+ E Y + P Q+LLR SKLRNT ++YG VIFTG D+KV+QN+T PSKRS IE+KMDK
Sbjct: 246 DLKGEKYPLSPQQLLLRGSKLRNTDYIYGVVIFTGPDTKVVQNSTDPPSKRSMIERKMDK 305
Query: 301 IIFILFAILVLISLISSIGFAV--KINYQTP--QWWYLKPKETDVYFNPGKPLVPGLAHL 356
II+++F ++ ++ S+ F + + ++Q + WYLKP ++ ++F+P + + + H
Sbjct: 306 IIYLMFLMVFSLAFFGSVLFGIWTRDDFQNGVMERWYLKPDDSSIFFDPKRAPMAAIYHF 365
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TAL+L Y IPISLYVSIEIVK LQ+IFINQDI MY +E+ PA ARTSNLNEELGQV
Sbjct: 366 LTALMLNSYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVG 425
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476
TILSDKTGTLTCN M+F+KCS+AGTAYG +EVE+A K+ + SA N
Sbjct: 426 TILSDKTGTLTCNSMEFIKCSIAGTAYGRGVTEVEMAMDKR---------KGSALVNQSN 476
Query: 477 SGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTA 536
S + D + +KGFNF D R+MDGNW+ E + D + FF++LA+CHT
Sbjct: 477 GNS---------TEDAVAAEPAVKGFNFRDERIMDGNWVTETHADVIQKFFQLLAVCHTV 527
Query: 537 IPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFK 596
IPE++E+TG ++YEAESPDEAAF++AARE GFEF+ RTQ+++ +RE G+ VER +
Sbjct: 528 IPEVDEDTGKISYEAESPDEAAFVIAARELGFEFFTRTQTTISVRELDLVTGERVERLYS 587
Query: 597 ILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGE 656
+LN+L+F+S +KRMSVIV+D+DG++LLLCKGADS++F+RLS++GR YE+ T +NEY +
Sbjct: 588 VLNVLEFSSSKKRMSVIVQDQDGKLLLLCKGADSVMFERLSESGRKYEKETRDHVNEYAD 647
Query: 657 AGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVE 716
AGLRTL LAY++LDE+EY + +AK+S+ ADREA ++ V++ +EK+L+L+GATAVE
Sbjct: 648 AGLRTLILAYRELDENEYEVFTERISEAKNSVSADREALIDEVTEKIEKNLVLLGATAVE 707
Query: 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD--- 773
DKLQ GVP CI+KLAQAG+KIWVLTGDKMETAINIGFACSLLR+ MKQI I +
Sbjct: 708 DKLQNGVPDCINKLAQAGIKIWVLTGDKMETAINIGFACSLLRRDMKQIIINLETPEIQQ 767
Query: 774 ---SVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFL 830
S K A A+K+N+L QIT+ +K A+ALII+GK+LAYALE+DMK FL
Sbjct: 768 LEKSGEKDAIAALKENVLHQITSGKAQLKASGGNAKAFALIIDGKSLAYALEEDMKGIFL 827
Query: 831 GLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVE 890
LA+ CASVICCR SPKQKALVTRLVK G+G+TTLAIGDGANDVGM+QEADIG+GISGVE
Sbjct: 828 ELAIGCASVICCRSSPKQKALVTRLVKTGSGQTTLAIGDGANDVGMLQEADIGVGISGVE 887
Query: 891 GMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
GMQAVM+SD +IAQFR+LERLL+VHGHWCY+RI++M+
Sbjct: 888 GMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISKMI 924
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/945 (55%), Positives = 688/945 (72%), Gaps = 45/945 (4%)
Query: 4 GRIRAKLRRSQLYTFACLRPHVNETEGSV--QGCPRVIYCNQPHMHKKRPLKYCTNYIST 61
G R ++ S+LY+F C +P E + +G RV++CN P + L Y NY+ST
Sbjct: 3 GERRKGMKFSKLYSFKCFKPFSREDHSQIGSRGYSRVVFCNDPDNPEALQLNYRGNYVST 62
Query: 62 TKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEA 121
TKY ++ PK+LFEQF RVANIYFL+ A +S +PL+P++ S+L PL IV+G +M KE
Sbjct: 63 TKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYTAPSVLAPLLIVIGATMVKEG 122
Query: 122 LEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSY 181
+ED RR QD E N RKV V G F W+ ++VGD+VKV KD++FPADLL LSSSY
Sbjct: 123 VEDLRRRKQDVEANNRKVEVLGKTGTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSSY 182
Query: 182 EDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIE 241
EDGICYVETMNLDGETNLK+K A+E TS ++E+ K F G +KCE+PN LY+FVG +
Sbjct: 183 EDGICYVETMNLDGETNLKLKHALEITS---DEESIKNFRGMIKCEDPNEHLYSFVGTLY 239
Query: 242 YDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKI 301
++ + Y + P QILLRDSKL+NT +VYG V+FTGHD+KVMQNAT PSKRS IEKKMD+I
Sbjct: 240 FEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIEKKMDQI 299
Query: 302 IFILFAILVLISLISSIGFAVKINYQTP-----QWWYLKPKETDVYFNPGKPLVPGLAHL 356
I+ILF+IL++I+ S+ F + + WYL+P T V+++P + + H
Sbjct: 300 IYILFSILIVIAFTGSVFFGIATRRDMSDNGKLRRWYLRPDHTTVFYDPRRAVAAAFFHF 359
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TAL+LYGYLIPISLYVSIE+VK LQ+IFINQD MY +E+ PA+ARTSNLNEELGQVD
Sbjct: 360 LTALMLYGYLIPISLYVSIEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQVD 419
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQ--NRESANAKH 474
TILSDKTGTLTCN M+F+KCS+AGTAYG +EVE+A KQ + +E+ + ES + K
Sbjct: 420 TILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVEVALRKQKGLMTQEEVGDNESLSIKE 479
Query: 475 KNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICH 534
+ + +KGFNF D R++DG W+ +PN + + FFR+LAICH
Sbjct: 480 QKA---------------------VKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICH 518
Query: 535 TAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVERE 594
TAIP++N +TG +TYEAESPDEAAF++A+RE GFEF+ R+Q+S+ + E G+ V+R
Sbjct: 519 TAIPDVNSDTGEITYEAESPDEAAFVIASRELGFEFFSRSQTSISLHEIDHMTGEKVDRV 578
Query: 595 FKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEY 654
+++L++L+F+S RKRMSVIVR+ + ++LLL KGADS++F RL+K+GR E T + + +Y
Sbjct: 579 YELLHVLEFSSSRKRMSVIVRNPENRLLLLSKGADSVMFKRLAKHGRQNERETKEHIKKY 638
Query: 655 GEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATA 714
EAGLRTL + Y+++DE EY W EF AK+ + DR+A ++ +D +EKDLIL+G+TA
Sbjct: 639 AEAGLRTLVITYREIDEDEYIVWEEEFLNAKTLVTEDRDALIDAAADKIEKDLILLGSTA 698
Query: 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD- 773
VEDKLQKGVP CI+KL+QAG+KIWVLTGDK ETAINIG+ACSLLR+GMKQI +T +SD
Sbjct: 699 VEDKLQKGVPDCIEKLSQAGVKIWVLTGDKTETAINIGYACSLLREGMKQILVTLDSSDI 758
Query: 774 ----------SVGKAAKEAVKDNILMQITNASQMI-KLERDPHAAYALIIEGKTLAYALE 822
+V KA+ +++K + ++ + + ++ + L+I+GK+L YAL+
Sbjct: 759 EALEKQGDKEAVAKASFQSIKKQLREGMSQTAAVTDNSAKENSEMFGLVIDGKSLTYALD 818
Query: 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADI 882
++ FL LA+ C SVICCR SPKQKALVTRLVK GTG+TTLAIGDGANDVGM+QEADI
Sbjct: 819 SKLEKEFLELAIRCNSVICCRSSPKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQEADI 878
Query: 883 GIGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
G+GISG EGMQAVMASDF+IAQFRFLERLL+VHGHWCY+RI M+
Sbjct: 879 GVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRITLMI 923
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/906 (48%), Positives = 605/906 (66%), Gaps = 51/906 (5%)
Query: 37 RVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP 96
R +YCN +P+++ N ISTTKYN F++ PK LFEQF R+ANIYFL + LS+TP
Sbjct: 36 RTVYCND--RESNQPVRFKGNSISTTKYNVFTFLPKGLFEQFRRIANIYFLGISCLSMTP 93
Query: 97 LSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKI 156
+SP SP++ + PL++V+ VS+ KEA EDW+RF D +N V + + + + PW K+
Sbjct: 94 ISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSINNSTVEI-LQDQQWVSIPWRKL 152
Query: 157 QVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEA 216
QVGDIVK++KD FFPAD+LF+SS+ DGICYVET NLDGETNLK+++A+E T E
Sbjct: 153 QVGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDGETNLKIRKALERTWDYLVPEK 212
Query: 217 FKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGH 276
EF G ++CE PN SLYTF GN+ ++ + P Q+LLR LRNT ++ G+V+FTGH
Sbjct: 213 AYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLLLRGCSLRNTEYIVGAVVFTGH 272
Query: 277 DSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKP 336
++KVM NA +PSKRS +EKK+DK+I +F +LV + LI +IG ++ + + YL
Sbjct: 273 ETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIGCSIVTDREDK---YLGL 329
Query: 337 KETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAI-FINQDISMYDD 395
+D + G L+ G T + L+ +IPISLYVSIE++KF+Q+ FIN+D++MY
Sbjct: 330 HNSDWEYRNG--LMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQFINRDLNMYHA 387
Query: 396 ESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAA 455
E+ PA ARTSNLNEELGQV+ I SDKTGTLT N M+F KCS+ G +YG +E+E A
Sbjct: 388 ETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEIEKGIA 447
Query: 456 KQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWL 515
++ + ++E+ R + + KGFNF+D RLM G W
Sbjct: 448 QRHGLKVQEEQRSTGAIRE-------------------------KGFNFDDPRLMRGAWR 482
Query: 516 KEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQ 575
EPN D FR LAICHT +PE +E + Y+A SPDEAA + AA+ FGF FYRRT
Sbjct: 483 NEPNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTP 542
Query: 576 SSVFIRERYPPK-GQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFD 634
+ V++RE + K G+ + ++ILN+L+F S RKR SV+ R DG+++L CKGAD++IF+
Sbjct: 543 TMVYVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFE 602
Query: 635 RLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREA 694
RL+ + T + L +G +GLRTL LAYK L+ Y +WN +F +AKS++ DRE
Sbjct: 603 RLANGMDDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSAL-RDREK 661
Query: 695 TLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754
L+ V++++EKDLIL+G+TA+EDKLQ+GVP CI+ L++AG+KIWVLTGDKMETAINI +A
Sbjct: 662 KLDEVAELIEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYA 721
Query: 755 CSLLRQGMKQICITALNSDSVGKAA------------KEAVKDNILMQITNASQMIKLER 802
C+L+ MKQ I++ +D++ +A KE VK + + A +
Sbjct: 722 CNLINNEMKQFVISS-ETDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVA 780
Query: 803 DPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGK 862
P +L+I+GK L YAL+ ++ L L++ C SV+CCRVSP QKA VT LV++G K
Sbjct: 781 GPK--LSLVIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQK 838
Query: 863 TTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKR 922
TL+IGDGANDV MIQ A +GIGISG+EGMQAVMASDF+IAQFRFL LL+VHG W Y R
Sbjct: 839 ITLSIGDGANDVSMIQAAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLR 898
Query: 923 IAQMVI 928
I ++V+
Sbjct: 899 ICKVVM 904
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 934 | ||||||
| 359482803 | 1229 | PREDICTED: putative phospholipid-transpo | 0.991 | 0.753 | 0.769 | 0.0 | |
| 255560731 | 1231 | Phospholipid-transporting ATPase, putati | 0.992 | 0.753 | 0.776 | 0.0 | |
| 224134621 | 1227 | aminophospholipid ATPase [Populus tricho | 0.992 | 0.755 | 0.776 | 0.0 | |
| 357454575 | 1224 | Aminophospholipid ATPase [Medicago trunc | 0.988 | 0.754 | 0.753 | 0.0 | |
| 356522182 | 1224 | PREDICTED: putative phospholipid-transpo | 0.992 | 0.757 | 0.749 | 0.0 | |
| 224128678 | 1201 | aminophospholipid ATPase [Populus tricho | 0.972 | 0.756 | 0.783 | 0.0 | |
| 307136290 | 1096 | phospholipid-transporting ATPase [Cucumi | 0.978 | 0.833 | 0.770 | 0.0 | |
| 449447866 | 1237 | PREDICTED: putative phospholipid-transpo | 0.978 | 0.738 | 0.767 | 0.0 | |
| 356550414 | 1224 | PREDICTED: putative phospholipid-transpo | 0.978 | 0.746 | 0.761 | 0.0 | |
| 356525995 | 1224 | PREDICTED: putative phospholipid-transpo | 0.992 | 0.757 | 0.752 | 0.0 |
| >gi|359482803|ref|XP_003632843.1| PREDICTED: putative phospholipid-transporting ATPase 4-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1513 bits (3917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 726/944 (76%), Positives = 812/944 (86%), Gaps = 18/944 (1%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGSVQ----GCPRVIYCNQPHMHKKRPLKYCT 56
MTRGRIRAKLR+S LYTF C R + E G R++YCNQP +H K+PL Y +
Sbjct: 1 MTRGRIRAKLRQSHLYTFTCFRQGTADAEAPHSFDGPGFSRIVYCNQPQVHSKKPLYYTS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
N ISTTKYN ++ PKA+FEQF RVAN+YFL+AA+LS+TP++PFS VSM+ PLA VVG+S
Sbjct: 61 NNISTTKYNIITFLPKAIFEQFRRVANLYFLLAAILSLTPVAPFSAVSMIAPLAFVVGLS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
MAKEALEDWRRF+QD +VN RK S+H GNGVF +KPW++I+VGD+VKVEKDQFFPADLL
Sbjct: 121 MAKEALEDWRRFIQDMKVNTRKASIHKGNGVFGFKPWQRIRVGDVVKVEKDQFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LSSSY+DGICYVETMNLDGETNLKVKR++E T PL++D F +F T+KCE+PNPSLYTF
Sbjct: 181 LSSSYDDGICYVETMNLDGETNLKVKRSLEVTLPLDDDGTFNDFRATIKCEDPNPSLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
VGN EY+R++Y +DPSQILLRDSKLRNTA VYG VIFTGHDSKVMQNAT SPSKRS IE+
Sbjct: 241 VGNFEYERQVYPLDPSQILLRDSKLRNTAFVYGVVIFTGHDSKVMQNATQSPSKRSRIER 300
Query: 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
KMD+II+ILF +LV+ISLISSIGFAVK YQ P WWYL+P T +NP KP + G+ HL
Sbjct: 301 KMDQIIYILFTLLVVISLISSIGFAVKTKYQMPDWWYLQPNNTTNLYNPKKPALSGIFHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
VTALILYGYLIPISLYVSIE+VK LQA FINQDI MYD+E+G AQARTSNLNEELGQVD
Sbjct: 361 VTALILYGYLIPISLYVSIEVVKVLQATFINQDIHMYDEETGNTAQARTSNLNEELGQVD 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESAN-AKHK 475
TILSDKTGTLTCNQMDFLKCS+AG+AYG SEVELAAAKQMAIDLEEQ E +N HK
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGSAYGSGSSEVELAAAKQMAIDLEEQGNELSNFPMHK 480
Query: 476 NS------------GSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTL 523
NS +EIELETV+TS D + K IKGF+FED RLM GNW KEPN D +
Sbjct: 481 NSTGDSWNNASGLEATEIELETVVTSKDEKEHKHVIKGFSFEDIRLMGGNWSKEPNADVI 540
Query: 524 LLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRER 583
LF RILA+CHTAIPE NEE G YEAESPDE +FLVAAREFGFEF +RT +SV +RER
Sbjct: 541 ELFLRILAVCHTAIPERNEEIGGFNYEAESPDEGSFLVAAREFGFEFCKRTHTSVHVRER 600
Query: 584 YPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMY 643
Y GQPVERE++ILNLL+FTSKRKRMSVIVRDEDGQI LLCKGADSIIFDRL+KNGRMY
Sbjct: 601 YVSSGQPVEREYQILNLLEFTSKRKRMSVIVRDEDGQIFLLCKGADSIIFDRLAKNGRMY 660
Query: 644 EEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMM 703
EEATT+ LNEYGE+GLRTLALAYK+L+ESEYSAWNSEF KAK+SIG DR+A LE VSD M
Sbjct: 661 EEATTRHLNEYGESGLRTLALAYKKLEESEYSAWNSEFMKAKTSIGPDRDAMLERVSDAM 720
Query: 704 EKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMK 763
E++LILVGATAVEDKLQKGVPQCIDKLAQAGLK+WVLTGDKMETAINIGFACSLLRQGMK
Sbjct: 721 ERELILVGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMK 780
Query: 764 QICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALED 823
QICIT +N D + KEAVK+NILMQITNASQMIKLE+DPHAA+ALII+GKTL +AL D
Sbjct: 781 QICIT-VNPDVQTQDGKEAVKENILMQITNASQMIKLEKDPHAAFALIIDGKTLEHALAD 839
Query: 824 DMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG 883
DMKH FLGLAV+CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG
Sbjct: 840 DMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG 899
Query: 884 IGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
+GISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 900 VGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 943
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255560731|ref|XP_002521379.1| Phospholipid-transporting ATPase, putative [Ricinus communis] gi|223539457|gb|EEF41047.1| Phospholipid-transporting ATPase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1512 bits (3915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 731/942 (77%), Positives = 827/942 (87%), Gaps = 15/942 (1%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEG----SVQGCPRVIYCNQPHMHKKRPLKYCT 56
MTRGRIRA+LRRS L+ F+C+RP E G R+++CNQP MH+K+PLKYC+
Sbjct: 1 MTRGRIRARLRRSHLHPFSCMRPRTEHDEAPHPIEGPGYSRMVHCNQPSMHRKKPLKYCS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
NYISTTKYN ++ PKALFEQF RVANIYFL+AA+LS+TP++PFS VSM+ PLA VVG+S
Sbjct: 61 NYISTTKYNVVTFLPKALFEQFRRVANIYFLLAAILSLTPVAPFSAVSMIFPLAFVVGIS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
MAKEALEDWRRFMQD +VN RK SVH G+GVF YKPW+KIQVGD+VKVEKDQFFPADLL
Sbjct: 121 MAKEALEDWRRFMQDMKVNTRKASVHTGDGVFQYKPWQKIQVGDVVKVEKDQFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LSSSYEDGICYVETMNLDGETNLK KRA+E T L +DEAFK FTGTVKCE+PNPSLYTF
Sbjct: 181 LSSSYEDGICYVETMNLDGETNLKPKRALEVTLSLEDDEAFKNFTGTVKCEDPNPSLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
+GNIEY+R++Y +DPSQILLRDSKLRNTA VYG VIFTG DSKVMQN+T SPSKRS IE+
Sbjct: 241 IGNIEYERQVYPLDPSQILLRDSKLRNTAFVYGVVIFTGFDSKVMQNSTKSPSKRSRIER 300
Query: 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
KMDKII+ILF+IL+LIS++SSIGFAVKI Q P WWY++P + + ++P P+ GLAHL
Sbjct: 301 KMDKIIYILFSILLLISMMSSIGFAVKIKLQMPDWWYMQPSKPENLYDPDSPVKSGLAHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TALILYGYLIPISLYVSIE+VK QA FI++D+ MYD+E+G AQARTSNLNEELGQVD
Sbjct: 361 ITALILYGYLIPISLYVSIEVVKVCQAKFIDEDLHMYDEETGNTAQARTSNLNEELGQVD 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476
TILSDKTGTLTCNQMDFLKCS+AGTAYGV SEVELAAAKQ+A+DLEEQ+ E +N N
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVELAAAKQIAMDLEEQDDELSNGSRPN 480
Query: 477 SGS-----------EIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLL 525
S + EIELETVITS D D K +KGF+FEDSRLMDGNWLKEPN D +LL
Sbjct: 481 SHTHNSWETRSGAPEIELETVITSKDERDQKPVLKGFSFEDSRLMDGNWLKEPNADVILL 540
Query: 526 FFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYP 585
FFRILAIC +A+PELNEETG+ TYEAESPDE AFLVAAREFGFEF +RTQSSVFI E+Y
Sbjct: 541 FFRILAICQSAVPELNEETGSFTYEAESPDEGAFLVAAREFGFEFCKRTQSSVFICEKYA 600
Query: 586 PKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEE 645
GQ VEREFK+LNLL+FTSKRKRMSVIVR+EDGQILL CKGADSIIFDRLSK+GRMYEE
Sbjct: 601 HPGQSVEREFKVLNLLEFTSKRKRMSVIVRNEDGQILLFCKGADSIIFDRLSKSGRMYEE 660
Query: 646 ATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEK 705
TT+ LNEYGEAGLRTLALAYK+LDESEY+AWN+EF KAK+SIGADR+ LE V+DMME+
Sbjct: 661 TTTRHLNEYGEAGLRTLALAYKKLDESEYTAWNNEFMKAKTSIGADRDTMLERVADMMER 720
Query: 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQI 765
+LILVG+TAVEDKLQKGVPQCIDKLAQAGLK+WVLTGDKMETAINIG+ACSLLRQGMKQI
Sbjct: 721 ELILVGSTAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYACSLLRQGMKQI 780
Query: 766 CITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDM 825
CIT NSD + + +K+AV++NI QITNASQMIKLE+DPHAA+ALII+GKTL YALEDDM
Sbjct: 781 CITVTNSDMIAQDSKQAVRENIQNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDM 840
Query: 826 KHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIG 885
KH FL LAV+CASVICCRVSPKQKALVTRLVKEGTG+TTLAIGDGANDVGMIQEADIG+G
Sbjct: 841 KHQFLALAVDCASVICCRVSPKQKALVTRLVKEGTGRTTLAIGDGANDVGMIQEADIGVG 900
Query: 886 ISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
ISGVEGMQAVMASDFSI+QFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 901 ISGVEGMQAVMASDFSISQFRFLERLLVVHGHWCYKRIAQMI 942
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134621|ref|XP_002327449.1| aminophospholipid ATPase [Populus trichocarpa] gi|222836003|gb|EEE74424.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1479 bits (3828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 730/940 (77%), Positives = 830/940 (88%), Gaps = 13/940 (1%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGSVQ----GCPRVIYCNQPHMHKKRPLKYCT 56
MTRGRIRA+LRRS L+ F+CLRP+ N +EG G R+++CNQPH H+K+PLKYC+
Sbjct: 1 MTRGRIRARLRRSHLHPFSCLRPNANNSEGPHPLLGPGFSRIVHCNQPHKHQKKPLKYCS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
NYISTTKYN ++ PKAL+EQF+R+AN+YFL+AA+LS+T ++PFSP+SM+LPLA VVG+S
Sbjct: 61 NYISTTKYNIVTFLPKALYEQFHRLANLYFLVAAVLSLTAVAPFSPLSMILPLAFVVGLS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
MAKEALEDWRRF QD +VN+RK SVH G GVF YKPW+KIQVGD+VKVEKDQFFPADLL
Sbjct: 121 MAKEALEDWRRFTQDMKVNSRKASVHKGGGVFGYKPWQKIQVGDVVKVEKDQFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LS+SY+DGICYVETMNLDGETNLKVKR++E T PL +DE+FK FTG +KCE+PNP+LYTF
Sbjct: 181 LSTSYDDGICYVETMNLDGETNLKVKRSLEVTLPLEDDESFKNFTGIIKCEDPNPNLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
VGN EY+R++Y +DP+QILLRDSKLRNT++VYG VIFTG DSKVMQN+T SPSKRS IEK
Sbjct: 241 VGNFEYERQVYPLDPTQILLRDSKLRNTSYVYGVVIFTGFDSKVMQNSTKSPSKRSKIEK 300
Query: 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
KMDKII+IL ++LVLIS ISSIGFAVKI +Q P W Y++P+ + ++P P G+AHL
Sbjct: 301 KMDKIIYILLSLLVLISSISSIGFAVKIKFQMPDWTYMQPRNENDLYDPDNPGKSGVAHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TALILYGYLIPISLYVSIEIVK QA FINQDI MYD+E+G AQARTSNLNEELGQVD
Sbjct: 361 ITALILYGYLIPISLYVSIEIVKVFQARFINQDIHMYDEETGNTAQARTSNLNEELGQVD 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESAN----- 471
TILSDKTGTLTCNQMDFLKCS+AGTAYGV SE+E+AAAKQMA+DLEEQ+ ++ N
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTAYGVCSSEIEVAAAKQMAMDLEEQDTQNTNVSRYG 480
Query: 472 -AKHK---NSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFF 527
+ HK G EIELE+VITS ND K IKGFNFEDSRLMDG WL E N + LLLFF
Sbjct: 481 KSAHKEDSRGGPEIELESVITSKCDNDQKPAIKGFNFEDSRLMDGKWLNERNREVLLLFF 540
Query: 528 RILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPK 587
RILAIC TA+PELNEETG TYEAESPDEAAFL AAREFGFEFY+RTQSSVFIRE+Y
Sbjct: 541 RILAICQTAVPELNEETGMFTYEAESPDEAAFLAAAREFGFEFYKRTQSSVFIREKYAHP 600
Query: 588 GQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEAT 647
G+ +EREFKILNLL+FTSKRKRMSVIVRDEDGQILLLCKGADS+IFDRLSKNGR+YEE T
Sbjct: 601 GRLIEREFKILNLLEFTSKRKRMSVIVRDEDGQILLLCKGADSVIFDRLSKNGRIYEETT 660
Query: 648 TKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDL 707
K LNEYGEAGLRTLALAYK+LDESEYSAWN+EF K K+SI DREA LE V+DMMEKDL
Sbjct: 661 VKHLNEYGEAGLRTLALAYKKLDESEYSAWNNEFVKVKTSISTDREAMLERVADMMEKDL 720
Query: 708 ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICI 767
ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF+CSLLRQGMK+ICI
Sbjct: 721 ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKRICI 780
Query: 768 TALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKH 827
T +NSD V + +K+AVK+NILMQITN+SQM+KL++DPHAA+ALII+GK+L+YALEDDMKH
Sbjct: 781 TVMNSDVVAQDSKQAVKENILMQITNSSQMVKLQKDPHAAFALIIDGKSLSYALEDDMKH 840
Query: 828 HFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887
HFL LAV CASVICCRVSPKQKALVTRLVKEGT KTTLAIGDGANDVGMIQEADIG+GIS
Sbjct: 841 HFLALAVGCASVICCRVSPKQKALVTRLVKEGTKKTTLAIGDGANDVGMIQEADIGVGIS 900
Query: 888 GVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
GVEGMQAVMASDFSI+QFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 901 GVEGMQAVMASDFSISQFRFLERLLVVHGHWCYKRIAQMI 940
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357454575|ref|XP_003597568.1| Aminophospholipid ATPase [Medicago truncatula] gi|355486616|gb|AES67819.1| Aminophospholipid ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1475 bits (3818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 705/936 (75%), Positives = 804/936 (85%), Gaps = 13/936 (1%)
Query: 5 RIRAKLRRSQLYTFACLRPH-VNETEGSVQG--CPRVIYCNQPHMHKKRPLKYCTNYIST 61
RIRAKLR S LYTF CLRP+ V+E +QG R +YCNQP +H+K+ L YC N IST
Sbjct: 6 RIRAKLRWSNLYTFGCLRPNTVDEVPHPLQGPGYSRTVYCNQPQIHEKKSLFYCKNNIST 65
Query: 62 TKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEA 121
TKYN +FPKALFEQF RVANIYFL+AA LS++P+SPFSP+SM+ PLA VVG+SMAKEA
Sbjct: 66 TKYNAIMFFPKALFEQFRRVANIYFLLAACLSLSPISPFSPLSMIAPLAFVVGLSMAKEA 125
Query: 122 LEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSY 181
LED RRF+QD +VN RK S H GNGVF K W+KI VGDIVKVEKDQFFPADLL LSSSY
Sbjct: 126 LEDSRRFLQDVKVNRRKASFHKGNGVFGLKSWQKIMVGDIVKVEKDQFFPADLLLLSSSY 185
Query: 182 EDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIE 241
EDGICYVETMNLDGETNLKVKR++EAT L+ D AFK+F+GT++CE+PNP+LYTFVGN E
Sbjct: 186 EDGICYVETMNLDGETNLKVKRSLEATFSLDNDGAFKDFSGTIRCEDPNPNLYTFVGNFE 245
Query: 242 YDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKI 301
Y+R++Y +DP ILLRDSKLRNT +VYG VIFTGHDSKVMQN+T SPSKRS IEKKMD I
Sbjct: 246 YERQVYPLDPGHILLRDSKLRNTEYVYGVVIFTGHDSKVMQNSTKSPSKRSRIEKKMDYI 305
Query: 302 IFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALI 361
I+ LF++L+ IS ISS+GF VK Y+TP+WWYL+P + + F+P K G++HL+TALI
Sbjct: 306 IYTLFSVLIAISFISSVGFVVKTKYETPKWWYLRPDQIEYQFDPKKLGFAGMSHLITALI 365
Query: 362 LYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421
LYGYLIPISLYVSIE+VK LQA FINQD+ MYD+E+G PA+ARTSNLNEELGQVDTILSD
Sbjct: 366 LYGYLIPISLYVSIEVVKVLQATFINQDLHMYDEETGTPAEARTSNLNEELGQVDTILSD 425
Query: 422 KTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGS-- 479
KTGTLTCNQMDFLKCS+AGT+YGV SEVELAAAKQMA DLEE++ + +N + G
Sbjct: 426 KTGTLTCNQMDFLKCSIAGTSYGVRSSEVELAAAKQMATDLEEEDSDLSNFPMQKKGKAP 485
Query: 480 --------EIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILA 531
EIELET++TS DG D + IKGF F+D+RLM+GNW K+PN + +LLFFRILA
Sbjct: 486 WENVGRAEEIELETIVTSKDGEDQRPAIKGFGFDDNRLMNGNWSKDPNAEVILLFFRILA 545
Query: 532 ICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPV 591
+CHTAIPELNEE+ + TYEAESPDE AFLVAAREFGFEFYRRTQSSV +RER GQ V
Sbjct: 546 VCHTAIPELNEESNSCTYEAESPDEGAFLVAAREFGFEFYRRTQSSVVVRERISTSGQVV 605
Query: 592 EREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLL 651
ER++KILNLL+FTSKRKRMSVIVRDE+G I+L CKGADSIIFDRLSKNG+ Y E T++ L
Sbjct: 606 ERDYKILNLLEFTSKRKRMSVIVRDEEGSIILFCKGADSIIFDRLSKNGKKYLETTSRHL 665
Query: 652 NEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVG 711
NEYGE GLRTLALAY++LDE EYS WN+EFQKAK+++G DREA LE VSD ME++LILVG
Sbjct: 666 NEYGEVGLRTLALAYRKLDEQEYSDWNNEFQKAKTAVGPDREAMLEKVSDSMERELILVG 725
Query: 712 ATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALN 771
ATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICI+ N
Sbjct: 726 ATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICISTTN 785
Query: 772 SDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLG 831
S+SV KEA+K NIL QITNASQ++ LE+DPHAA+ALII+GKTL YALEDD+KH FLG
Sbjct: 786 SESVINDGKEAIKSNILTQITNASQLMNLEKDPHAAFALIIDGKTLTYALEDDIKHQFLG 845
Query: 832 LAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEG 891
LAV CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEG
Sbjct: 846 LAVNCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEG 905
Query: 892 MQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
MQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 906 MQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 941
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522182|ref|XP_003529726.1| PREDICTED: putative phospholipid-transporting ATPase 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1467 bits (3799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 705/941 (74%), Positives = 798/941 (84%), Gaps = 14/941 (1%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNE-TEGSVQG--CPRVIYCNQPHMHKKRPLKYCTN 57
MTRGRIRAKLRRS LYTF CL+P E +QG R +YCNQP +H KRPL YC N
Sbjct: 1 MTRGRIRAKLRRSHLYTFGCLKPSTTEEAPHPLQGPGFSRTVYCNQPLLHDKRPLLYCKN 60
Query: 58 YISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSM 117
ISTTKYN ++FPKALFEQF RVANIYFL+AA LS +P+SPFSP+SM+ PLA VVG+SM
Sbjct: 61 DISTTKYNVITFFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSM 120
Query: 118 AKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFL 177
AKEALED RRF+QD +VN RKV+ H G+G+F + W+ I VGD+VKV KDQFFPADLL L
Sbjct: 121 AKEALEDSRRFVQDVKVNRRKVNRHKGDGIFGPRSWQNIMVGDVVKVNKDQFFPADLLLL 180
Query: 178 SSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFV 237
SSSYEDGICYVETMNLDGETNLKVKR++EAT L+ DE FK+FTGT++CE+PNP+LYTFV
Sbjct: 181 SSSYEDGICYVETMNLDGETNLKVKRSLEATMTLDNDEVFKDFTGTIQCEDPNPNLYTFV 240
Query: 238 GNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKK 297
GN++Y+ ++Y +DPSQILLRDSKLRNT ++YG IFTGHDSKVMQN+T SPSKRS IEKK
Sbjct: 241 GNLDYECQIYPLDPSQILLRDSKLRNTDYIYGVAIFTGHDSKVMQNSTKSPSKRSTIEKK 300
Query: 298 MDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357
MD II+ LF +L+LIS+ISSIGF K YQ P+WWYL+P + ++P K V G++HL+
Sbjct: 301 MDYIIYTLFTVLILISVISSIGFIFKTKYQAPKWWYLRPDNIEYQYDPNKVGVAGMSHLI 360
Query: 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDT 417
TALILYGYLIPISLYVSIE+VK LQA FINQDI MYD+E+G PA ARTSNLNEELGQVDT
Sbjct: 361 TALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDEETGTPADARTSNLNEELGQVDT 420
Query: 418 ILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNS 477
ILSDKTGTLTCNQMDFLKCS+AGTAYGV SE+E+AAAKQMA D E+Q + +N S
Sbjct: 421 ILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEIEVAAAKQMASDHEDQESDLSNFPMPKS 480
Query: 478 -----------GSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLF 526
EIELETV+TS D K IKGF FED RLM+ NWL+EPN D LL+F
Sbjct: 481 KARISWDNVRKAEEIELETVVTSKGDEDQKHAIKGFGFEDDRLMNCNWLQEPNADDLLMF 540
Query: 527 FRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPP 586
FRILA+CHTAIPELNEETG TYEAESPDE AFLVAAREFGFEF RRTQSS+FI ER+
Sbjct: 541 FRILAVCHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCRRTQSSIFIHERFSA 600
Query: 587 KGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEA 646
+ VERE+K+LNLLDFTSKRKRMSVIVRDE+G + L CKGADSIIFDRLSKNG+ Y EA
Sbjct: 601 SRKVVEREYKLLNLLDFTSKRKRMSVIVRDEEGSLFLFCKGADSIIFDRLSKNGKHYLEA 660
Query: 647 TTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKD 706
TT+ LNEYGEAGLRTLALAY++LDE EY+AWN+EFQKAK+++GADR++ LE VSDMMEK
Sbjct: 661 TTRHLNEYGEAGLRTLALAYRKLDEQEYTAWNNEFQKAKAAVGADRDSMLERVSDMMEKG 720
Query: 707 LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIC 766
LILVGATAVEDKLQKGVPQCID LAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIC
Sbjct: 721 LILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIC 780
Query: 767 ITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMK 826
IT SDSV K+ +KDNIL QITN SQMIKLE+DPHAA+ALII+GKTL YALEDDMK
Sbjct: 781 ITTPVSDSVATDVKQGIKDNILNQITNGSQMIKLEKDPHAAFALIIDGKTLTYALEDDMK 840
Query: 827 HHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI 886
FLGLAV+CASVICCRVSPKQKALVTRLVK+G+GKTTLAIGDGANDVGMIQEADIG+GI
Sbjct: 841 LLFLGLAVDCASVICCRVSPKQKALVTRLVKQGSGKTTLAIGDGANDVGMIQEADIGVGI 900
Query: 887 SGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
SGVEGMQAVMASDF+IAQFR+LERLLVVHGHWCYKRIAQM+
Sbjct: 901 SGVEGMQAVMASDFAIAQFRYLERLLVVHGHWCYKRIAQMI 941
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224128678|ref|XP_002329063.1| aminophospholipid ATPase [Populus trichocarpa] gi|222839734|gb|EEE78057.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1467 bits (3797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 724/924 (78%), Positives = 810/924 (87%), Gaps = 16/924 (1%)
Query: 20 CLRPHVNETEG----SVQGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALF 75
CLRP+ N EG S G R+++CN+P H K+PLKYC+NYISTTKYN ++ PKALF
Sbjct: 1 CLRPNANNNEGPHPLSGPGFSRIVHCNRPDRHLKKPLKYCSNYISTTKYNIVTFLPKALF 60
Query: 76 EQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVN 135
EQF+RVAN YFL+AA LS+T ++PFSPVSM+ PLA VVG+SM KEALEDW RF QD +VN
Sbjct: 61 EQFHRVANFYFLVAAGLSLTAVAPFSPVSMIAPLAFVVGISMLKEALEDWHRFAQDMKVN 120
Query: 136 ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDG 195
+RK SVH G+GVF YKPW+KIQVGD+VKVEKDQFFPADLL LS+SY+DG+ YVETMNLDG
Sbjct: 121 SRKASVHKGDGVFGYKPWQKIQVGDVVKVEKDQFFPADLLLLSASYDDGVSYVETMNLDG 180
Query: 196 ETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQIL 255
ETNLKVKR++E T PL +DEAFK FTG +KCE+PNPSLYTF+GN EY+R++Y +DPSQIL
Sbjct: 181 ETNLKVKRSLEVTLPLEDDEAFKNFTGIIKCEDPNPSLYTFIGNFEYERQVYPLDPSQIL 240
Query: 256 LRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLI 315
LRDSKLRNTA+VYG VIFTG DSKVMQN+T SPSKRS IEKKMDKII+IL ++L+LIS I
Sbjct: 241 LRDSKLRNTAYVYGVVIFTGFDSKVMQNSTKSPSKRSKIEKKMDKIIYILLSLLLLISSI 300
Query: 316 SSIGFAVKINYQTPQWWYL-KPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVS 374
SSIGFAVKI Q P WWY+ K + D +NP +P GLAHLVTALILYGYLIPISLYVS
Sbjct: 301 SSIGFAVKIKLQMPDWWYMPKNPDNDSLYNPDQPSKSGLAHLVTALILYGYLIPISLYVS 360
Query: 375 IEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL 434
IEIVK QA FINQDI MYD+ESG AQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL
Sbjct: 361 IEIVKVFQARFINQDIQMYDEESGNTAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL 420
Query: 435 KCSVAGTAYGVSPSEVELAAAKQMAIDLEEQN---------RESANAKHKNS--GSEIEL 483
KCS+AGTAYGV SEVELAAAKQMA+DLEEQ+ R+SA+ ++S G EIEL
Sbjct: 421 KCSIAGTAYGVRSSEVELAAAKQMAMDLEEQDTQITNGSRYRKSAHNSWEDSRGGPEIEL 480
Query: 484 ETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEE 543
E+VITS ND K IKGF+FED++LM+GNWLKEPN + +LLFFRILAIC TA+PELNEE
Sbjct: 481 ESVITSKGENDQKPAIKGFSFEDNKLMNGNWLKEPNTEVILLFFRILAICQTAVPELNEE 540
Query: 544 TGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDF 603
TG TYEAESPDEAAFL AAREFGFEF +RTQSSVFIRE+Y GQ +EREFKILNLL+F
Sbjct: 541 TGMFTYEAESPDEAAFLAAAREFGFEFCKRTQSSVFIREKYAHPGQLIEREFKILNLLEF 600
Query: 604 TSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLA 663
TS+RKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYE T K LN+YGE GLRTLA
Sbjct: 601 TSQRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYETTTAKHLNDYGEVGLRTLA 660
Query: 664 LAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGV 723
LAYK+LDESEYSAWN+EF KAK+SI ADR+A LE V+DMMEKDLILVGATAVEDKLQKGV
Sbjct: 661 LAYKKLDESEYSAWNNEFVKAKTSISADRDAMLERVADMMEKDLILVGATAVEDKLQKGV 720
Query: 724 PQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAV 783
PQCIDKLAQAGLKIWVLTGDKMETAINIGF+CSLLRQGMKQI IT +NSD+V + +K+AV
Sbjct: 721 PQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQIFITVMNSDAVAQESKQAV 780
Query: 784 KDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR 843
K+NILMQITNASQM+KLE+DPHAA+ALII+GKTL+YALEDDMKH FL LAV CASVICCR
Sbjct: 781 KENILMQITNASQMVKLEKDPHAAFALIIDGKTLSYALEDDMKHQFLALAVVCASVICCR 840
Query: 844 VSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIA 903
VSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEGMQAVMASDFSI+
Sbjct: 841 VSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIS 900
Query: 904 QFRFLERLLVVHGHWCYKRIAQMV 927
QFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 901 QFRFLERLLVVHGHWCYKRIAQMI 924
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|307136290|gb|ADN34117.1| phospholipid-transporting ATPase [Cucumis melo subsp. melo] | Back alignment and taxonomy information |
|---|
Score = 1465 bits (3792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 719/933 (77%), Positives = 803/933 (86%), Gaps = 19/933 (2%)
Query: 13 SQLYTFACLRP-HVNETEGSVQ----GCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFF 67
S LYTFACLR E + S G R++ CNQP H+++PLKYC+NYISTTKYN
Sbjct: 18 SHLYTFACLRADSAREVDDSNPLTGPGFSRIVCCNQPQTHERKPLKYCSNYISTTKYNVL 77
Query: 68 SYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127
S+ PKALFEQF RVAN+YFL+AALLS+TP++PFS VSM+ PL VVG+SMAKEALEDWRR
Sbjct: 78 SFVPKALFEQFRRVANLYFLLAALLSLTPVAPFSAVSMIAPLVFVVGLSMAKEALEDWRR 137
Query: 128 FMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICY 187
F+QD +VN RKVSVH G GVF Y+PW KI+VGDIVKVEKDQFFPADLL LSS YEDGICY
Sbjct: 138 FVQDMKVNLRKVSVHKGEGVFGYRPWHKIRVGDIVKVEKDQFFPADLLLLSSCYEDGICY 197
Query: 188 VETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELY 247
VETMNLDGETNLKVKRA+E T PL++D FK+F+G + CE+PNP+LYTFVGN EYDR++Y
Sbjct: 198 VETMNLDGETNLKVKRALEVTLPLDDDATFKDFSGKIYCEDPNPNLYTFVGNFEYDRQIY 257
Query: 248 AIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFA 307
+DP+QILLRDSKLRNTA+ YG VIFTGHDSKVMQNAT SPSKRS IE+KMDKII+ILF
Sbjct: 258 PLDPNQILLRDSKLRNTAYAYGVVIFTGHDSKVMQNATKSPSKRSRIERKMDKIIYILFT 317
Query: 308 ILVLISLISSIGFAVKINYQTPQWWYLKPK--ETDVYFNPGKPLVPGLAHLVTALILYGY 365
+L+LIS ISSIGFAVK YQ WWYL+ + D +NP KP + GL HL+TALILYGY
Sbjct: 318 LLILISSISSIGFAVKTKYQMTDWWYLRTTGDDHDPLYNPRKPTLSGLIHLITALILYGY 377
Query: 366 LIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGT 425
LIPISLYVSIE+VK LQA FINQDI+MY +E+ PA+ARTSNLNEELGQVDTILSDKTGT
Sbjct: 378 LIPISLYVSIEVVKVLQASFINQDINMYCEETANPARARTSNLNEELGQVDTILSDKTGT 437
Query: 426 LTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQ-----------NRESANAKH 474
LTCNQMDFLKCS+AGTAYGV SEVELAAA+QMA D EEQ N + + H
Sbjct: 438 LTCNQMDFLKCSIAGTAYGVKSSEVELAAARQMAYDFEEQDGEYPDVHGQKNSQQPSMPH 497
Query: 475 KNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICH 534
GSEIELETV+TS DG D K IK F+FEDSRL GNWL EPN D LLLFFRILAICH
Sbjct: 498 SRLGSEIELETVVTSTDGKDQKPAIKYFSFEDSRLTGGNWLNEPNHDVLLLFFRILAICH 557
Query: 535 TAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVERE 594
TAIPELNEETG TYEAESPDE AFLVAAREFGFEF +RTQS++ +RERYP Q VERE
Sbjct: 558 TAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCKRTQSTLVVRERYPSPDQVVERE 617
Query: 595 FKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEY 654
+KILNLLDFTSKRKRMSVIV+DE+GQILLLCKGADSIIFDRLSKNGRMYEEATT+ LNEY
Sbjct: 618 YKILNLLDFTSKRKRMSVIVKDEEGQILLLCKGADSIIFDRLSKNGRMYEEATTRHLNEY 677
Query: 655 GEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATA 714
GEAGLRTLALAY++L+E+EY+AWN+EFQKAK+SIG DR+A LE VSD+ME++L+LVGATA
Sbjct: 678 GEAGLRTLALAYRKLEEAEYNAWNNEFQKAKTSIGGDRDAMLERVSDLMERELVLVGATA 737
Query: 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDS 774
VEDKLQ GVPQCIDKLAQAGLKIWVLTGDKMETAINIG+ACSLLRQGMK+ICI+ SDS
Sbjct: 738 VEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKRICIST-TSDS 796
Query: 775 VGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAV 834
+ + KEA+K+NI QITNASQMIKLE DPHAA+ALII+GKTL YALEDDMK FLGLAV
Sbjct: 797 LAQDGKEAMKENISNQITNASQMIKLENDPHAAFALIIDGKTLTYALEDDMKLQFLGLAV 856
Query: 835 ECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQA 894
+CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEGMQA
Sbjct: 857 DCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQA 916
Query: 895 VMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
VMASDFSIAQFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 917 VMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 949
|
Source: Cucumis melo subsp. melo Species: Cucumis melo Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449447866|ref|XP_004141687.1| PREDICTED: putative phospholipid-transporting ATPase 4-like [Cucumis sativus] gi|449480563|ref|XP_004155931.1| PREDICTED: putative phospholipid-transporting ATPase 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1459 bits (3776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/934 (76%), Positives = 804/934 (86%), Gaps = 20/934 (2%)
Query: 13 SQLYTFA-CLRP-HVNETEGSVQ----GCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNF 66
S LYTFA CLR E + S G RV+ CNQP H+++PLKYCTNYISTTKYN
Sbjct: 18 SHLYTFAACLRADSAREVDDSNPLTGPGFSRVVCCNQPQTHERKPLKYCTNYISTTKYNV 77
Query: 67 FSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126
S+ PKALFEQF RVAN+YFL+AALLS+TP++PFS VSM+ PL VVG+SMAKEALEDWR
Sbjct: 78 LSFVPKALFEQFRRVANLYFLLAALLSLTPVAPFSAVSMIAPLVFVVGLSMAKEALEDWR 137
Query: 127 RFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGIC 186
RF+QD +VN RK SVH G GVF ++PW K++VGDIVKV+KDQFFPADLL LSS YEDGIC
Sbjct: 138 RFVQDMKVNLRKASVHKGEGVFGHRPWHKLRVGDIVKVQKDQFFPADLLLLSSCYEDGIC 197
Query: 187 YVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDREL 246
YVETMNLDGETNLKVKRA+E T PL++D FK+F+G + CE+PNP+LYTFVGN EYDR++
Sbjct: 198 YVETMNLDGETNLKVKRALEVTLPLDDDATFKDFSGKIYCEDPNPNLYTFVGNFEYDRQV 257
Query: 247 YAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILF 306
Y +DP+QILLRDSKLRNTA+ YG VIFTGHDSKVMQNAT SPSKRS IE+KMDKII+ILF
Sbjct: 258 YPLDPNQILLRDSKLRNTAYAYGVVIFTGHDSKVMQNATKSPSKRSRIERKMDKIIYILF 317
Query: 307 AILVLISLISSIGFAVKINYQTPQWWYLKPK--ETDVYFNPGKPLVPGLAHLVTALILYG 364
+L+LIS ISSIGFAVK YQ WWYL+ + D +NP KP + GL HL+TALILYG
Sbjct: 318 TLLILISSISSIGFAVKTKYQMTDWWYLRTTGDDHDPLYNPRKPTLSGLIHLITALILYG 377
Query: 365 YLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTG 424
YLIPISLYVSIE+VK LQA FINQDI+MY +E+ PAQARTSNLNEELGQVDTILSDKTG
Sbjct: 378 YLIPISLYVSIEVVKVLQASFINQDINMYCEETANPAQARTSNLNEELGQVDTILSDKTG 437
Query: 425 TLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQ-----------NRESANAK 473
TLTCNQMD+LKCS+AGTAYGV SEVELAAA+QMA D EEQ N + ++
Sbjct: 438 TLTCNQMDYLKCSIAGTAYGVKSSEVELAAARQMAYDFEEQDGEFSDVHGQKNSQPSSMP 497
Query: 474 HKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAIC 533
H GSEIELETV+TS DG D K IK F+FEDSRL GNWL EPN D LLLFFRILAIC
Sbjct: 498 HSRLGSEIELETVVTSTDGKDQKSAIKYFSFEDSRLTGGNWLNEPNHDVLLLFFRILAIC 557
Query: 534 HTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593
HTAIPELNEETG TYEAESPDE AFLVAAREFGFEF +RTQS++ +RERYP Q VER
Sbjct: 558 HTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCKRTQSTLVVRERYPSPDQVVER 617
Query: 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNE 653
E+KILNLLDFTSKRKRMSVI++DE+GQILLLCKGADSIIFDRLSKNGRMYEEATT+ LNE
Sbjct: 618 EYKILNLLDFTSKRKRMSVIIKDEEGQILLLCKGADSIIFDRLSKNGRMYEEATTRHLNE 677
Query: 654 YGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGAT 713
YGEAGLRTLALAY++L+E+EY+AWN+EFQKAK+SIG DR+A LE VSD+ME++LILVGAT
Sbjct: 678 YGEAGLRTLALAYRKLEEAEYNAWNNEFQKAKTSIGGDRDAMLERVSDLMERELILVGAT 737
Query: 714 AVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD 773
AVEDKLQ GVPQCIDKLAQAGLKIWVLTGDKMETAINIG+ACSLLRQGMK+ICI+ SD
Sbjct: 738 AVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKRICIST-TSD 796
Query: 774 SVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA 833
S+ + KEA+K+NIL QITNA+QMIKLE DPHAA+ALII+GKTL YALEDDMK FLGLA
Sbjct: 797 SLAQDGKEAMKENILNQITNAAQMIKLENDPHAAFALIIDGKTLTYALEDDMKLQFLGLA 856
Query: 834 VECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQ 893
V+CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEGMQ
Sbjct: 857 VDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQ 916
Query: 894 AVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
AVMASDFSIAQFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 917 AVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 950
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356550414|ref|XP_003543582.1| PREDICTED: putative phospholipid-transporting ATPase 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1456 bits (3768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 707/929 (76%), Positives = 790/929 (85%), Gaps = 15/929 (1%)
Query: 13 SQLYTFA-CLRPHVNE-TEGSVQG--CPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFS 68
S LYTF CLRP E +QG R +YCNQP + +K L YC N +STTKYN +
Sbjct: 13 SHLYTFGGCLRPTTTEEVPHPLQGPGYSRTVYCNQPQLLEKNSLFYCKNDVSTTKYNVIT 72
Query: 69 YFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRF 128
+FPKALFEQF RVANIYFL+AA LS +P+SPFSP+SM+ PLA VVG+SMAKEALED RRF
Sbjct: 73 FFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRF 132
Query: 129 MQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYV 188
+QD +VN RK S+H GNG F + W+KI VGD+VKVEKDQFFPADLL L+SSYEDGICYV
Sbjct: 133 LQDVKVNHRKASLHKGNGDFGLRSWQKIMVGDVVKVEKDQFFPADLLLLASSYEDGICYV 192
Query: 189 ETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYA 248
ETMNLDGETNLKVKR++EAT L+ D AFK+F+GT++CE+PNP LYTFVGN EY+ ++Y
Sbjct: 193 ETMNLDGETNLKVKRSLEATLSLDNDGAFKDFSGTIRCEDPNPDLYTFVGNFEYEHQVYP 252
Query: 249 IDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAI 308
+DP QILLRDSKLRNT HVYG VIFTGHDSKVMQN+T SPSKRS IEKKMD II+ LF +
Sbjct: 253 LDPGQILLRDSKLRNTDHVYGVVIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTV 312
Query: 309 LVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIP 368
L+LIS ISSIGF K YQTP+WWYL+P + F+PGK + G++HL+TALILYGYLIP
Sbjct: 313 LILISFISSIGFVFKTKYQTPKWWYLRPGNIEYQFDPGKLGLAGMSHLITALILYGYLIP 372
Query: 369 ISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTC 428
ISLYVSIE VK LQA FINQDI MYDDESG PA+ARTSNLNEELGQVDTILSDKTGTLTC
Sbjct: 373 ISLYVSIEFVKVLQATFINQDIQMYDDESGTPAEARTSNLNEELGQVDTILSDKTGTLTC 432
Query: 429 NQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQN--------RESANAKHKN--SG 478
NQMDFLKCS+AGTAYGV SEVELAAAKQMA DLEEQ R+ +N +N
Sbjct: 433 NQMDFLKCSIAGTAYGVRSSEVELAAAKQMASDLEEQELNLSNFPMRKESNVPWENITED 492
Query: 479 SEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIP 538
E EL T +TS D + IKGF FED RLM+GNWLKEPN D LLLFFRILA+CHTAIP
Sbjct: 493 EETELGTAVTSKDDGARRPAIKGFGFEDDRLMNGNWLKEPNADVLLLFFRILAVCHTAIP 552
Query: 539 ELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598
ELNEET + TYEAESPDE AFLVAAREFGFEFYRRTQSSV I ER+ GQ V+RE+KIL
Sbjct: 553 ELNEETESCTYEAESPDEGAFLVAAREFGFEFYRRTQSSVAICERFSASGQVVQREYKIL 612
Query: 599 NLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658
NLLDFTSKRKRMSVIVRDE+G I+L CKGADSIIFDRLSKNG+MY EATT+ LNEYGEAG
Sbjct: 613 NLLDFTSKRKRMSVIVRDEEGSIILFCKGADSIIFDRLSKNGKMYLEATTRHLNEYGEAG 672
Query: 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDK 718
LRTLALAY++LD+ EYS WN+EFQKAK+++G++R+ LE VSD+ME++LILVGATAVEDK
Sbjct: 673 LRTLALAYRKLDDQEYSDWNNEFQKAKTAVGSERDTMLEQVSDVMERELILVGATAVEDK 732
Query: 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKA 778
LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT +NSDSV
Sbjct: 733 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT-MNSDSVTND 791
Query: 779 AKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECAS 838
KE +K NIL QITNASQMIKLE+DPHAA+ALII+GKTL YALEDD+KH FLGLAV CAS
Sbjct: 792 GKEVIKGNILNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDVKHQFLGLAVGCAS 851
Query: 839 VICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMAS 898
VICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEGMQAVMAS
Sbjct: 852 VICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMAS 911
Query: 899 DFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
DF+IAQFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 912 DFAIAQFRFLERLLVVHGHWCYKRIAQMI 940
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356525995|ref|XP_003531605.1| PREDICTED: putative phospholipid-transporting ATPase 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1453 bits (3761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/941 (75%), Positives = 799/941 (84%), Gaps = 14/941 (1%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGSVQGCP---RVIYCNQPHMHKKRPLKYCTN 57
MTRGRIRA+LRRS LYTF CL+P E P R +YCNQP +H K+P+ YC N
Sbjct: 1 MTRGRIRARLRRSHLYTFGCLKPSTTEEAPHPLNGPGFSRTVYCNQPLLHDKKPVLYCKN 60
Query: 58 YISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSM 117
ISTTKYN ++FPKALFEQF RVANIYFL+AA LS +P+SPFSP+SM+ PLA VVG+SM
Sbjct: 61 DISTTKYNVITFFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSM 120
Query: 118 AKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFL 177
AKEALED RRF+QD +VN RKV+ H G+G FS + W+ I VGD+VKV KDQFFPADLL L
Sbjct: 121 AKEALEDSRRFLQDVKVNRRKVNRHKGDGFFSPRSWQNIMVGDVVKVNKDQFFPADLLLL 180
Query: 178 SSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFV 237
SSSYEDGICYVETMNLDGETNLKVKR+ E T L+ DE FK+FTGT++CE+PNP+LYTFV
Sbjct: 181 SSSYEDGICYVETMNLDGETNLKVKRSSETTMTLDNDEVFKDFTGTIRCEDPNPNLYTFV 240
Query: 238 GNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKK 297
GN+EY+R++Y +DPSQILLRDSKLRNT ++YG IFTGHDSKVMQN+T SPSKRS IEKK
Sbjct: 241 GNLEYERQIYPLDPSQILLRDSKLRNTDYIYGVAIFTGHDSKVMQNSTKSPSKRSTIEKK 300
Query: 298 MDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357
MD II+ LF +L+LIS+ISSIGF K YQ P+WWYL+P + ++P K + G++HL+
Sbjct: 301 MDYIIYTLFTVLILISVISSIGFIFKTKYQAPKWWYLRPDNIEYQYDPNKVGLAGMSHLI 360
Query: 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDT 417
TALILYGYLIPISLYVSIE+VK LQA FINQDI MYD+E+G PA ARTSNLNEELGQVDT
Sbjct: 361 TALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDEETGTPADARTSNLNEELGQVDT 420
Query: 418 ILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNS 477
ILSDKTGTLTCNQMDFLKCS+AGTAYGV SEVE+AAAKQMA D E+Q+ + +N S
Sbjct: 421 ILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVEVAAAKQMASDHEDQDSDLSNFPMPKS 480
Query: 478 -----------GSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLF 526
EIELETV+TS D K IKGF FED RLM+ NWLKEPN D LL+F
Sbjct: 481 KARVSWDDVRKAEEIELETVVTSKGDEDQKHAIKGFGFEDDRLMNCNWLKEPNADDLLMF 540
Query: 527 FRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPP 586
FRILA+CHTAIPELNEETG TYEAESPDE AFLVAAREFGF F RRTQSS+FI ER+
Sbjct: 541 FRILAVCHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFAFCRRTQSSIFIHERFSA 600
Query: 587 KGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEA 646
GQ VERE+K+LNLLDFTSKRKRMSVIVRDE+G LLLCKGADSIIFDRLSKNG+ Y EA
Sbjct: 601 SGQVVEREYKLLNLLDFTSKRKRMSVIVRDEEGSFLLLCKGADSIIFDRLSKNGKNYLEA 660
Query: 647 TTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKD 706
TT+ LNEYGEAGLRTLALAY++LDE EY+AWN+EFQKAK+++GADR++ LE VSDMMEK+
Sbjct: 661 TTRHLNEYGEAGLRTLALAYRKLDEQEYTAWNNEFQKAKAAVGADRDSMLERVSDMMEKE 720
Query: 707 LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIC 766
LILVGATAVEDKLQKGVPQCID LAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIC
Sbjct: 721 LILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIC 780
Query: 767 ITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMK 826
IT +DSV K+A+KDNIL QITN SQMIKLE+DPHAA+ALII+GKTL YALEDDMK
Sbjct: 781 ITTPVTDSVATDVKQAIKDNILNQITNGSQMIKLEKDPHAAFALIIDGKTLTYALEDDMK 840
Query: 827 HHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI 886
FLGLAV+CASVICCRVSPKQKALVTRLVK+G+GKTTLAIGDGANDVGMIQEADIG+GI
Sbjct: 841 LLFLGLAVDCASVICCRVSPKQKALVTRLVKQGSGKTTLAIGDGANDVGMIQEADIGVGI 900
Query: 887 SGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
SGVEGMQAVMASDF+IAQFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 901 SGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMI 941
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 934 | ||||||
| TAIR|locus:2007858 | 1216 | AT1G17500 [Arabidopsis thalian | 0.985 | 0.756 | 0.714 | 0.0 | |
| TAIR|locus:2088217 | 1243 | AT3G13900 [Arabidopsis thalian | 0.990 | 0.744 | 0.705 | 0.0 | |
| TAIR|locus:2030180 | 1228 | AT1G72700 [Arabidopsis thalian | 0.991 | 0.754 | 0.703 | 0.0 | |
| TAIR|locus:2020038 | 1240 | AT1G54280 [Arabidopsis thalian | 0.964 | 0.726 | 0.710 | 0.0 | |
| TAIR|locus:2026900 | 1200 | AT1G68710 [Arabidopsis thalian | 0.972 | 0.756 | 0.576 | 6.8e-285 | |
| TAIR|locus:2102345 | 1202 | AT3G25610 [Arabidopsis thalian | 0.966 | 0.751 | 0.576 | 2.9e-284 | |
| TAIR|locus:2031860 | 1203 | ACA.l "autoinhibited Ca2+/ATPa | 0.970 | 0.753 | 0.568 | 2.8e-279 | |
| DICTYBASE|DDB_G0269380 | 1313 | DDB_G0269380 "P-type ATPase" [ | 0.438 | 0.312 | 0.461 | 4.3e-182 | |
| ZFIN|ZDB-GENE-120502-1 | 1189 | atp8b5b "ATPase, class I, type | 0.437 | 0.343 | 0.494 | 1.8e-170 | |
| ASPGD|ASPL0000000502 | 1348 | AN6112 [Emericella nidulans (t | 0.431 | 0.298 | 0.448 | 1.9e-169 |
| TAIR|locus:2007858 AT1G17500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3480 (1230.1 bits), Expect = 0., P = 0.
Identities = 666/932 (71%), Positives = 777/932 (83%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGS--VQG--CPRVIYCNQPHMHKKRPLKYCT 56
M RGRIR+KLR S +YTF CLRP +E + +QG R +YCNQPHMHKK+PLKY +
Sbjct: 1 MARGRIRSKLRLSHIYTFGCLRPSADEGQDPHPIQGPGFSRTVYCNQPHMHKKKPLKYRS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
NY+STT+YN ++FPK L+EQF+R AN YFL+AA+LSV PLSPF+ SM+ PL VVG+S
Sbjct: 61 NYVSTTRYNLITFFPKCLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
M KEALEDW RFMQD ++NA KV VH +G F + W+KI VGDIVKVEKD FFPADLL
Sbjct: 121 MLKEALEDWSRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LSSSYEDGICYVETMNLDGETNLKVKR++E T L++ ++FK+FTG ++CE+PNPSLYTF
Sbjct: 181 LSSSYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
VGN+EY+R+++ +DPSQILLRDSKLRNT +VYG V+FTGHD+KVMQN+T SPSKRS IEK
Sbjct: 241 VGNLEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEK 300
Query: 297 KMDKXXXXXXXXXXXXXXXXXXXXAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
MD A + + P+WWYL+P+E + NP P+ G HL
Sbjct: 301 TMDYIIYTLLVLLILISCISSSGFAWETKFHMPKWWYLRPEEPENLTNPSNPVYAGFVHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TAL+LYGYLIPISLYVSIE+VK LQA FIN+D+ MYD ESG+PA ARTSNLNEELGQVD
Sbjct: 361 ITALLLYGYLIPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQVD 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476
TILSDKTGTLTCNQMDFLKCS+AGT+YGV SEVE+AAA+QMA+DL+E S+
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTPR 480
Query: 477 SGS-EIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535
+ + +IE+E+ IT + IKGF FED RLMDGNWL+EP+ D +LLFFRILAICHT
Sbjct: 481 AQARDIEVESSITP------RIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHT 534
Query: 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREF 595
AIPELNEETG TYEAESPDEA+FL AA EFGF F++RTQSSV++ ER GQ +ERE+
Sbjct: 535 AIPELNEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREY 594
Query: 596 KILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYG 655
K+LNLLDFTSKRKRMSV+VRDE+GQILLLCKGADSIIF+RL+KNG++Y TTK LNEYG
Sbjct: 595 KVLNLLDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYG 654
Query: 656 EAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAV 715
EAGLRTLAL+Y++LDE EYSAWN+EF KAK+SIG+DR+ LE +SDM+EKDLILVGATAV
Sbjct: 655 EAGLRTLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAV 714
Query: 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV 775
EDKLQKGVPQCIDKLAQAGLK+WVLTGDKMETAINIG++CSLLRQGMKQICIT +NS+
Sbjct: 715 EDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSEGA 774
Query: 776 GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVE 835
+ AK AVKDNIL QIT A QM+KLE+DPHAA+ALII+GKTL YALED+MK+ FL LAV+
Sbjct: 775 SQDAK-AVKDNILNQITKAVQMVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALAVD 833
Query: 836 CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAV 895
CASVICCRVSPKQKALVTRLVKEGTGK TLAIGDGANDVGMIQEADIG+GISGVEGMQAV
Sbjct: 834 CASVICCRVSPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQAV 893
Query: 896 MASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
MASDFSIAQFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 894 MASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 925
|
|
| TAIR|locus:2088217 AT3G13900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3437 (1214.9 bits), Expect = 0., P = 0.
Identities = 667/946 (70%), Positives = 772/946 (81%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEG----SVQGCPRVIYCNQPHMHKKRPLKYCT 56
M R RIR+++R+S YTF CLRP E +G + G R+++CNQPH+H + L+Y +
Sbjct: 1 MGRRRIRSRIRKSHFYTFKCLRPKTLEDQGPHIINGPGYTRIVHCNQPHLHLAKVLRYTS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
NY+STT+YN ++ PK L+EQF+RVAN YFL+AA+LSV PLSPF+ SM+ PL VVG+S
Sbjct: 61 NYVSTTRYNLITFLPKCLYEQFHRVANFYFLVAAILSVFPLSPFNKWSMIAPLIFVVGLS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
M KEALEDWRRFMQD +VN+RK +VH G+G F + W+K++VGD+VKVEKDQFFPADLL
Sbjct: 121 MGKEALEDWRRFMQDVKVNSRKATVHRGDGDFGRRKWKKLRVGDVVKVEKDQFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LSSSYEDGICYVETMNLDGETNLKVKR ++ T PL D+ F+ F+GT+KCE+PNP+LYTF
Sbjct: 181 LSSSYEDGICYVETMNLDGETNLKVKRCLDVTLPLERDDTFQSFSGTIKCEDPNPNLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
VGN+EYD ++Y +DPSQILLRDSKLRNT++VYG V+FTGHD+KVMQN+T SPSKRS IEK
Sbjct: 241 VGNLEYDGQVYPLDPSQILLRDSKLRNTSYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEK 300
Query: 297 KMDKXXXXXXXXXXXXXXXXXXXXAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
+MD AV WWYL+P + + NP P + HL
Sbjct: 301 RMDYIIYTLFALLVLVSFISSLGFAVMTKMHMGDWWYLRPDKPERLTNPRNPFHAWVVHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TA++LYGYLIPISLYVSIE+VK LQA FINQD+ MYD ESG PAQARTSNLNEELGQVD
Sbjct: 361 ITAVLLYGYLIPISLYVSIELVKVLQATFINQDLQMYDSESGTPAQARTSNLNEELGQVD 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476
TILSDKTGTLTCNQMDFLKCS+AGT+YGV SEVELAAAKQMAIDL+E+ E +
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTSYGVRASEVELAAAKQMAIDLDEEQGEEVTHLPRT 480
Query: 477 SG-------------SEIELETVITSNDGNDFKRR--IKGFNFEDSRLMDGNWLKEPNVD 521
G S+IELETVIT+ D D + IKGF+FED RLM GNWL EPN D
Sbjct: 481 RGRMHGYAKMPSKTSSDIELETVITATDEGDQTQSTGIKGFSFEDQRLMGGNWLNEPNSD 540
Query: 522 TLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIR 581
+L+F RILA+CHTAIPE++E+TG TYEAESPDE AFLVAA EFGFEF +RTQSSVFI
Sbjct: 541 DILMFLRILAVCHTAIPEVDEDTGKCTYEAESPDEVAFLVAAGEFGFEFTKRTQSSVFIS 600
Query: 582 ERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGR 641
ER+ GQPVERE+K+LN+LDFTSKRKRMSVIVRDE GQILLLCKGADSIIF+RLSKNG+
Sbjct: 601 ERH--SGQPVEREYKVLNVLDFTSKRKRMSVIVRDEKGQILLLCKGADSIIFERLSKNGK 658
Query: 642 MYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSD 701
Y EAT+K LN YGEAGLRTLAL+Y++LDE+EYS WNSEF KAK+S+GADR+ LE VSD
Sbjct: 659 NYLEATSKHLNGYGEAGLRTLALSYRKLDETEYSIWNSEFHKAKTSVGADRDEMLEKVSD 718
Query: 702 MMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQG 761
MMEK+LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG+ACSLLRQG
Sbjct: 719 MMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQG 778
Query: 762 MKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821
MKQI I N + + + A ++NILMQI NASQMIKLE+DPHAA+ALII+GKTL YAL
Sbjct: 779 MKQIYIALRNEEGSSQDPEAAARENILMQIINASQMIKLEKDPHAAFALIIDGKTLTYAL 838
Query: 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEAD 881
EDD+K+ FL LAV+CASVICCRVSPKQKALVTRL KEGTGKTTLAIGDGANDVGMIQEAD
Sbjct: 839 EDDIKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEAD 898
Query: 882 IGIGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
IG+GISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 899 IGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 944
|
|
| TAIR|locus:2030180 AT1G72700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3433 (1213.5 bits), Expect = 0., P = 0.
Identities = 660/938 (70%), Positives = 778/938 (82%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGS--VQG--CPRVIYCNQPHMHKKRPLKYCT 56
M RGRIR+KLR S LYTF CLRP E + S +QG R ++CNQPHMHKK+PL+Y +
Sbjct: 1 MARGRIRSKLRLSLLYTFGCLRPATLEGQDSQPIQGPGFSRTVFCNQPHMHKKKPLRYRS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
NY+STT+YN ++FPK+L+EQF+R AN+YFL+AA+LSV PLSPF+ SM+ PL VVG+S
Sbjct: 61 NYVSTTRYNLITFFPKSLYEQFHRAANLYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
M KEALEDWRRFMQD ++NARK VH +GVF + W+K+ VGDIVKVEKD+FFPADLL
Sbjct: 121 MLKEALEDWRRFMQDVKINARKTCVHKSDGVFRQRKWKKVSVGDIVKVEKDEFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LSSSYEDGICYVETMNLDGETNLKVKR++E + PL++DE+FK F T++CE+PNP+LYTF
Sbjct: 181 LSSSYEDGICYVETMNLDGETNLKVKRSLEVSLPLDDDESFKNFMATIRCEDPNPNLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
VGN+E++R+ + +DPSQILLRDSKLRNT +VYG V+FTG D+KVMQN+T SPSKRS IE+
Sbjct: 241 VGNLEFERQTFPLDPSQILLRDSKLRNTTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIER 300
Query: 297 KMDKXXXXXXXXXXXXXXXXXXXXAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
MD A + + P+ WYL+P E + NP P+ G+ HL
Sbjct: 301 TMDYIIYTLLVLLILISCISSSGFAWETEFHMPKMWYLRPGEPIDFTNPINPIYAGVVHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TAL+LYGYLIPISLYVSIE+VK QA FINQD+ MYDDESG+PA ARTSNLNEELGQV
Sbjct: 361 ITALLLYGYLIPISLYVSIEVVKVWQASFINQDLHMYDDESGVPANARTSNLNEELGQVH 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHK- 475
TILSDKTGTLTCNQMDFLKCS+AGT+YGV SEVE+AAAKQMA+DLEE S+ + +
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQT 480
Query: 476 ------NSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRI 529
+S E+E V N+ N + IKGF FED+RLM+GNWL+E + +L FFRI
Sbjct: 481 KVYGTWDSSRTQEIE-VEGDNNYNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRI 539
Query: 530 LAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589
LAICHTAIPELNEETG TYEAESPDEA+FL AAREFGFEF++RTQSSVFIRER+ GQ
Sbjct: 540 LAICHTAIPELNEETGKYTYEAESPDEASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQ 599
Query: 590 PVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTK 649
+ERE+K+LNLL+FTSKRKRM+VIVRDE+GQILLLCKGADSIIF+RL+KNG+ Y TT+
Sbjct: 600 IIEREYKVLNLLEFTSKRKRMTVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPTTR 659
Query: 650 LLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLIL 709
L EYGEAGLRTLALAY++LDE EY+AWNSEF KAK+SIG+DR+ LE +DM+EK+LIL
Sbjct: 660 HLTEYGEAGLRTLALAYRKLDEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKELIL 719
Query: 710 VGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITA 769
+GATAVEDKLQKGVPQCIDKLAQAGLK+WVLTGDKMETAINIGFACSLLRQGM+QICIT+
Sbjct: 720 IGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICITS 779
Query: 770 LNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHF 829
+NS+ + +K VK+NIL Q+T A QM+KLE+DPHAA+ALII+GKTL YALEDDMK+ F
Sbjct: 780 MNSEGGSQDSKRVVKENILNQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALEDDMKYQF 839
Query: 830 LGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGV 889
L LAV+CASVICCRVSPKQKALV RLVKEGTGKTTLAIGDGANDVGMIQEADIG+GISGV
Sbjct: 840 LALAVDCASVICCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGV 899
Query: 890 EGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
EGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQM+
Sbjct: 900 EGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 937
|
|
| TAIR|locus:2020038 AT1G54280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3371 (1191.7 bits), Expect = 0., P = 0.
Identities = 654/920 (71%), Positives = 764/920 (83%)
Query: 23 PHVNETEGSVQGCPRVIYCNQPHMHKKRPL-KYCTNYISTTKYNFFSYFPKALFEQFNRV 81
PHV G G R+++CNQPH+H L +Y +NY+STT+YN ++ PK L+EQF+RV
Sbjct: 31 PHV--INGP--GYTRIVHCNQPHLHLATKLIRYRSNYVSTTRYNLLTFLPKCLYEQFHRV 86
Query: 82 ANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSV 141
AN YFL+AA+LSV PLSPF+ SM+ PL VVG+SM KEALEDWRRFMQD EVN+RK SV
Sbjct: 87 ANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMGKEALEDWRRFMQDVEVNSRKASV 146
Query: 142 HVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKV 201
H G+G F + W++I+VGDIV+VEKD+FFPADLL LSSSYEDGICYVETMNLDGETNLKV
Sbjct: 147 HKGSGDFGRRTWKRIRVGDIVRVEKDEFFPADLLLLSSSYEDGICYVETMNLDGETNLKV 206
Query: 202 KRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKL 261
KR ++AT L +DE+F+ F+GT+KCE+PNP+LYTFVGN+E D ++Y +DP+QILLRDSKL
Sbjct: 207 KRCLDATLALEKDESFQNFSGTIKCEDPNPNLYTFVGNLECDGQVYPLDPNQILLRDSKL 266
Query: 262 RNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKXXXXXXXXXXXXXXXXXXXXA 321
RNTA+VYG V+FTGHD+KVMQN+T SPSKRS IEK+MD A
Sbjct: 267 RNTAYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFALLLTVSFISSLGFA 326
Query: 322 VKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFL 381
V +WWYL+P + + NP PL + HL+TAL+LYGYLIPISLYVSIE+VK L
Sbjct: 327 VMTKLLMAEWWYLRPDKPESLTNPTNPLYAWVVHLITALLLYGYLIPISLYVSIEVVKVL 386
Query: 382 QAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGT 441
QA FINQD+ +YD ESG PAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCS+AGT
Sbjct: 387 QAHFINQDLQLYDSESGTPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGT 446
Query: 442 AYGVSPSEVELAAAKQMAIDLEEQNRESAN-----------AK-HKNSGSEIELETVITS 489
+YGV SEVELAAAKQMA+DLEE+ E AN AK + S+ ELETV+T+
Sbjct: 447 SYGVRASEVELAAAKQMAMDLEEKGEEVANLSMNKGRTQRYAKLASKTSSDFELETVVTA 506
Query: 490 NDGNDFKRR--IKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNL 547
+D D K+ +KGF+FED+RLM+ NWL EPN D +L+FFRILA+CHTAIPE++E+TG
Sbjct: 507 SDEKDQKQNTGVKGFSFEDNRLMNENWLNEPNSDDILMFFRILAVCHTAIPEVDEDTGMC 566
Query: 548 TYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKR 607
TYEAESPDE AFLVA+REFGFEF +RTQSSVFI ER+ GQPV+RE+KILNLLDFTSKR
Sbjct: 567 TYEAESPDEVAFLVASREFGFEFTKRTQSSVFIAERFSSSGQPVDREYKILNLLDFTSKR 626
Query: 608 KRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYK 667
KRMS IVRDE+GQILLLCKGADSIIF+RLSK+G+ Y AT+K LN YGEAGLRTLAL Y+
Sbjct: 627 KRMSAIVRDEEGQILLLCKGADSIIFERLSKSGKEYLGATSKHLNVYGEAGLRTLALGYR 686
Query: 668 QLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCI 727
+LDE+EY+AWNSEF KAK+S+GADR+ LE VSDMMEK+LILVGATAVEDKLQKGVPQCI
Sbjct: 687 KLDETEYAAWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCI 746
Query: 728 DKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNI 787
D LAQAGLKIWVLTGDKMETAINIG+ACSLLRQGMKQI I+ N + + ++ A K++I
Sbjct: 747 DNLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQISISLTNVEESSQNSEAAAKESI 806
Query: 788 LMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK 847
LMQITNASQMIK+E+DPHAA+ALII+GKTL YAL+DD+K+ FL LAV+CASVICCRVSPK
Sbjct: 807 LMQITNASQMIKIEKDPHAAFALIIDGKTLTYALKDDVKYQFLALAVDCASVICCRVSPK 866
Query: 848 QKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF 907
QKALVTRL KEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEGMQAVMASDFSIAQFRF
Sbjct: 867 QKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRF 926
Query: 908 LERLLVVHGHWCYKRIAQMV 927
LERLLVVHGHWCYKRIAQM+
Sbjct: 927 LERLLVVHGHWCYKRIAQMI 946
|
|
| TAIR|locus:2026900 AT1G68710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2737 (968.5 bits), Expect = 6.8e-285, P = 6.8e-285
Identities = 540/936 (57%), Positives = 685/936 (73%)
Query: 5 RIRAKLRRSQLYTFACLRPHVNETEGSV--QGCPRVIYCNQPHMHKKRPLKYCTNYISTT 62
R R +L+ S+LYT C + + + G RV+YCN+P + Y NY+ TT
Sbjct: 8 RRRRRLQLSKLYTLTCAQACFKQDHSQIGGPGFSRVVYCNEPDSPEADSRNYSDNYVRTT 67
Query: 63 KYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEAL 122
KY ++ PK+LFEQF RVAN YFL+ +L+ TPL+P++ S ++PL V+G +M KE +
Sbjct: 68 KYTLATFLPKSLFEQFRRVANFYFLVTGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGV 127
Query: 123 EDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182
EDWRR QD EVN RKV VH G+G F K W+ + +GDIVKVEK++FFPADL+ LSSSYE
Sbjct: 128 EDWRRQKQDNEVNNRKVKVHRGDGSFDAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYE 187
Query: 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEY 242
D ICYVETMNLDGETNLKVK+ +E TS L ++ FK F VKCE+PN +LY+FVG +E
Sbjct: 188 DAICYVETMNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMEL 247
Query: 243 DRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKXX 302
Y + P Q+LLRDSKLRNT ++G+VIFTGHD+KV+QN+T PSKRS IEKKMDK
Sbjct: 248 KGAKYPLSPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKII 307
Query: 303 XXXXXXXXXXXXXXXXXXAVK----INYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358
V + + WYL+P + ++F+P + V + H +T
Sbjct: 308 YLMFFMVITMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLT 367
Query: 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTI 418
A++LY Y IPISLYVSIEIVK LQ+IFINQDI MY +E+ PA+ARTSNLNEELGQVDTI
Sbjct: 368 AVMLYSYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTI 427
Query: 419 LSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSG 478
LSDKTGTLTCN M+F+KCSVAGTAYG +EVE+A ++ L Q+ E+
Sbjct: 428 LSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDEN--------- 478
Query: 479 SEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIP 538
+I++E S + + +KGFNF D R+M+GNW+ E + D + FFR+LA+CHT IP
Sbjct: 479 -DIDMEY---SKEAITEESTVKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIP 534
Query: 539 ELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598
E++E+T ++YEAESPDEAAF++AARE GFEF+ RTQ+++ +RE G+ VER +K+L
Sbjct: 535 EVDEDTEKISYEAESPDEAAFVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVL 594
Query: 599 NLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658
N+L+F S RKRMSVIV++EDG++LLLCKGAD+++F+RLSKNGR +EE T +NEY +AG
Sbjct: 595 NVLEFNSTRKRMSVIVQEEDGKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAG 654
Query: 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDK 718
LRTL LAY++LDE EY +N +AKSS+ ADRE+ +E V++ +EKDLIL+GATAVEDK
Sbjct: 655 LRTLILAYRELDEKEYKVFNERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDK 714
Query: 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD--SVG 776
LQ GVP CIDKLAQAG+KIWVLTGDKMETAINIGFACSLLRQ MKQI I + S+
Sbjct: 715 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLE 774
Query: 777 KAAKEAV-----KDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLG 831
K ++ V K+N+L QI N +K A+ALII+GK+LAYAL+DD+KH FL
Sbjct: 775 KTGEKDVIAKASKENVLSQIINGKTQLKYSGGN--AFALIIDGKSLAYALDDDIKHIFLE 832
Query: 832 LAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEG 891
LAV CASVICCR SPKQKALVTRLVK G GKTTLAIGDGANDVGM+QEADIG+GISGVEG
Sbjct: 833 LAVSCASVICCRSSPKQKALVTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEG 892
Query: 892 MQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
MQAVM+SD +IAQFR+LERLL+VHGHWCY+RI+ M+
Sbjct: 893 MQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISTMI 928
|
|
| TAIR|locus:2102345 AT3G25610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2731 (966.4 bits), Expect = 2.9e-284, P = 2.9e-284
Identities = 541/938 (57%), Positives = 685/938 (73%)
Query: 5 RIRAKLRRSQLYTFACLRPHVNETEGSV--QGCPRVIYCNQPHMHKKRPLKYCTNYISTT 62
R R +L S++Y++ C + E ++ G RV+YCN+P Y NY+ +T
Sbjct: 6 RRRRRLHLSKIYSYTCGKSSFQEDHSNIGGPGFSRVVYCNEPGSPAAERRNYAGNYVRST 65
Query: 63 KYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEAL 122
KY S+FPK+LFEQF RVAN YFL+ +LS+T LSP+ VS LLPLA+V+ +M KE +
Sbjct: 66 KYTVASFFPKSLFEQFRRVANFYFLVTGILSLTDLSPYGAVSALLPLALVISATMVKEGI 125
Query: 123 EDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182
EDWRR QD EVN RKV VH GNG+F + W ++VGDIV+VEKD+FFPADLL LSSSYE
Sbjct: 126 EDWRRKQQDIEVNNRKVKVHDGNGIFRQEEWRNLRVGDIVRVEKDEFFPADLLLLSSSYE 185
Query: 183 DGICYVETMNLDGETNLKVKRAMEATSPL-NEDEAFKEFTGTVKCENPNPSLYTFVGNIE 241
D +CYVETMNLDGETNLKVK+ +EATS L N+D FK+F G V+CE+PN +LY FVG +
Sbjct: 186 DSVCYVETMNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGTLA 245
Query: 242 YDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKX 301
+ E + + QILLRDSKLRNT +VYG+V+FTGHD+KV+QN+T PSKRS IE+ MDK
Sbjct: 246 LEEERFPLSIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMDKI 305
Query: 302 XXXXXXXXXXXXXXXXXXXAV-----KINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
V K+ + WYLKP + D++F+P + + + H
Sbjct: 306 IYLMFGLVFLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIYHF 365
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
TA +LY Y IPISLYVSIEIVK LQ+IFIN+DI MY +E+ PAQARTSNLNEELG VD
Sbjct: 366 FTATMLYSYFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEELGMVD 425
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476
TILSDKTGTLTCN M+F+KCS+AG AYG +EVE A MA+ S + N
Sbjct: 426 TILSDKTGTLTCNSMEFIKCSIAGKAYGRGITEVERA----MAV-------RSGGSPLVN 474
Query: 477 SGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTA 536
+L+ V+ + ++KGFNFED R+M+GNW+++P L FFR+LA+CHTA
Sbjct: 475 E----DLDVVVDQSGP-----KVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTA 525
Query: 537 IPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFK 596
IPE +EE+GN++YEAESPDEAAF+VAAREFGFEF+ RTQ+ + RE G+ VER ++
Sbjct: 526 IPETDEESGNVSYEAESPDEAAFVVAAREFGFEFFNRTQNGISFRELDLVSGEKVERVYR 585
Query: 597 ILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGE 656
+LN+L+F S RKRMSVIVRD+DG++LLL KGAD+++F+RL+KNGR +E T + +N+Y +
Sbjct: 586 LLNVLEFNSTRKRMSVIVRDDDGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYAD 645
Query: 657 AGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVE 716
AGLRTL LAY+++DE+EY +N F +AK+S+ DREA ++ ++D ME+DLIL+GATAVE
Sbjct: 646 AGLRTLVLAYREVDENEYIEFNKSFNEAKASVSEDREALIDEITDKMERDLILLGATAVE 705
Query: 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITA----LNS 772
DKLQ GVP+CIDKLAQAG+KIWVLTGDKMETAINIGFA SLLRQ MKQI I + S
Sbjct: 706 DKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFASSLLRQEMKQIIINLETPQIKS 765
Query: 773 --DSVGKAAKE-AVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHF 829
S GK E A +++++MQ+ ++ A+ALII+GK+L YALED++K F
Sbjct: 766 LEKSGGKDEIELASRESVVMQLQEGKALLAASGASSEAFALIIDGKSLTYALEDEIKKMF 825
Query: 830 LGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGV 889
L LA CASVICCR SPKQKALVTRLVK GTGKTTLAIGDGANDVGM+QEADIG+GISGV
Sbjct: 826 LDLATSCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGV 885
Query: 890 EGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
EGMQAVM+SD +IAQFR+LERLL+VHGHWCY RIA M+
Sbjct: 886 EGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRIASMI 923
|
|
| TAIR|locus:2031860 ACA.l "autoinhibited Ca2+/ATPase II" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2684 (949.9 bits), Expect = 2.8e-279, P = 2.8e-279
Identities = 537/945 (56%), Positives = 679/945 (71%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGSV--QGCPRVIYCNQPHMHKKRPLKYCTNY 58
MT+ R R +L S +Y F + + E + G RV+YCN+P+ Y NY
Sbjct: 1 MTKCR-RRRLHLSNIYAFKGRKSNFQEDHSHIGGPGFSRVVYCNEPNSPAAERRNYVGNY 59
Query: 59 ISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMA 118
+ +TKY S+ PK+LFEQF RVAN YFL+ +LS+T LSP+SP+S LLPL V+ SM
Sbjct: 60 VRSTKYTLASFIPKSLFEQFRRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMV 119
Query: 119 KEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLS 178
KEA+EDW R QD E+N RKV VH GNG+F + W ++VG+IV+VEKD+FFPADLL LS
Sbjct: 120 KEAIEDWGRKKQDIEMNNRKVKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLS 179
Query: 179 SSYEDGICYVETMNLDGETNLKVKRAMEATSP-LNEDEAFKEFTGTVKCENPNPSLYTFV 237
SSYED ICYVETMNLDGETNLKVK+ +EATS L+ED FKE VKCE+PN LYTFV
Sbjct: 180 SSYEDSICYVETMNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFV 239
Query: 238 GNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKK 297
G + ++ + + +Q+LLRDSKLRNT ++YG V+FTGHD+KV+QN+T PSKRS IE+K
Sbjct: 240 GTLHFEEQRLPLSITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERK 299
Query: 298 MDKXXXXXXXXXXXXXXXXXXXXAVKI------NYQTPQWWYLKPKETDVYFNPGKPLVP 351
MDK ++ N + WYL+P D++F+P + +
Sbjct: 300 MDKIIYLMFGVVFLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMA 359
Query: 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEE 411
+ H TA++LY Y IPISLYVSIEIVK LQ++FIN DI MY +E+ PA ARTSNLNEE
Sbjct: 360 AVYHFFTAVMLYSYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEE 419
Query: 412 LGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESAN 471
LG VDTILSDKTGTLTCN M+F+KCS+AGTAYG +EVE + MA+ N S
Sbjct: 420 LGMVDTILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVE----RSMAM---RSNGSSL- 471
Query: 472 AKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILA 531
G +++ V+ G +IKGFNF D R+M GNW+K+ + L FFR+LA
Sbjct: 472 -----VGDDLD---VVVDQSGP----KIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLA 519
Query: 532 ICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPV 591
+CHTAIPE +E TG+++YEAESPDEAAF+VAAREFGFEF+ RTQ+ + RE G+ V
Sbjct: 520 VCHTAIPETDEATGSVSYEAESPDEAAFVVAAREFGFEFFSRTQNGISFRELDLASGKTV 579
Query: 592 EREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLL 651
ER +++LN+L+F S RKRMSVIVRDEDG++LLL KGAD+++F+RL+KNGR +EE T + +
Sbjct: 580 ERVYRLLNVLEFNSARKRMSVIVRDEDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHV 639
Query: 652 NEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVG 711
NEY +AGLRTL LAY+++DE+EY ++ F +AK+S+ ADRE+ ++ +++ ME+DLIL+G
Sbjct: 640 NEYADAGLRTLILAYREVDENEYIEFSKNFNEAKNSVTADRESLIDEITEQMERDLILLG 699
Query: 712 ATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT--- 768
ATAVEDKLQ GVP CIDKLAQAG+KIWVLTGDKMETAINIGFACSLLRQ MKQI I
Sbjct: 700 ATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQEMKQIIINLET 759
Query: 769 ----ALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP--HAAYALIIEGKTLAYALE 822
AL A + A +++++ Q+ ++ H A+ALII+GK+L YALE
Sbjct: 760 PHIKALEKAGEKDAIEHASRESVVNQMEEGKALLTASSSASSHEAFALIIDGKSLTYALE 819
Query: 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADI 882
DD K FL LA CASVICCR SPKQKALVTRLVK GTGKTTLAIGDGANDVGM+QEADI
Sbjct: 820 DDFKKKFLDLATGCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADI 879
Query: 883 GIGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
G+GISGVEGMQAVM+SD +IAQFR+LERLL+VHGHWCY RI+ M+
Sbjct: 880 GVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRISSMI 924
|
|
| DICTYBASE|DDB_G0269380 DDB_G0269380 "P-type ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 933 (333.5 bits), Expect = 4.3e-182, Sum P(2) = 4.3e-182
Identities = 199/431 (46%), Positives = 279/431 (64%)
Query: 502 FNFEDSRLMDGNWLKEPNVDTLLL---FFRILAICHTAIPEL-NEETGNLTYEAESPDEA 557
F F+D R++ + ++ N + L F +LA+CH+ +P+ N++ + YEA SPDEA
Sbjct: 591 FGFKDRRIIT-HLDEDKNSEQSFLINEFLTLLAVCHSVVPDRPNKDDSEIIYEASSPDEA 649
Query: 558 AFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDE 617
A + AA+ G+ FY R + + R G+ +ER F++LN+L+F S RKRMSVI R+
Sbjct: 650 ALVSAAKNLGYAFYNRDPTGCLVNIR----GK-IER-FEVLNVLEFNSDRKRMSVICRNP 703
Query: 618 DGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAW 677
G+I+L CKGAD+ + L K+ T + L ++ GLRTL LAY L+E +Y W
Sbjct: 704 QGRIILYCKGADTTVLPLLRKDQEELYSITLEFLQDFAADGLRTLCLAYTYLEEEDYQQW 763
Query: 678 NSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKI 737
N +++A SI DR+ ++ VS+++E++L L+G+TA+EDKLQ+GVPQ I L +A +KI
Sbjct: 764 NELYKEAAISI-QDRDMKVDKVSELIERNLSLIGSTAIEDKLQEGVPQAIANLIKANIKI 822
Query: 738 WVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797
WVLTGDK ETAINIGF+C LL M+ I + N + V + A+ +A
Sbjct: 823 WVLTGDKQETAINIGFSCHLLTSDMRIIILNGSNQEDVHNQIQGAI---------DAYFS 873
Query: 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVK 857
E ++ +AL++EG L +ALE ++K FL LA C SVICCR +P QKA V ++V+
Sbjct: 874 DDAENHQNSGFALVVEGSCLNFALEGELKSVFLELAANCKSVICCRTTPLQKAQVVKMVR 933
Query: 858 EGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFLERLLVVHGH 917
+ TLAIGDGANDV MIQ A IGIGISG EGMQAVMASD+SIAQF FL RLLVVHG
Sbjct: 934 DTLRAVTLAIGDGANDVSMIQAAHIGIGISGHEGMQAVMASDYSIAQFSFLYRLLVVHGR 993
Query: 918 WCYKRIAQMVI 928
W YKR +++++
Sbjct: 994 WDYKRNSKLML 1004
|
|
| ZFIN|ZDB-GENE-120502-1 atp8b5b "ATPase, class I, type 8B, member 5b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 977 (349.0 bits), Expect = 1.8e-170, Sum P(2) = 1.8e-170
Identities = 215/435 (49%), Positives = 292/435 (67%)
Query: 502 FNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEET-GNLTYEAESPDEAAFL 560
F F D +L++ L P V FFR+LA+CHT +PE E+T G+L Y+A+SPDE A +
Sbjct: 453 FFFHDHKLVEAVKLGSPEVHA---FFRLLALCHTVMPE--EKTQGDLFYQAQSPDEGALV 507
Query: 561 VAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQ 620
AAR FGF F RT ++ + E G +E +++L +LDF + RKRMSVIVR+ +G+
Sbjct: 508 TAARNFGFVFRARTPETISVVEM----G--IETTYELLAVLDFNNVRKRMSVIVRNPEGK 561
Query: 621 ILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSE 680
++L CKGAD+II++RL + E TT+ LNEY GLRTLALAYK LDE +++ W
Sbjct: 562 LMLYCKGADTIIYERLHPSCSKVMEVTTEHLNEYAGEGLRTLALAYKDLDEDKFAEWRRR 621
Query: 681 FQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740
+A ++ DRE L+ + + +EKDLIL+GA+AVEDKLQ GVPQ I++LA+A +KIWVL
Sbjct: 622 HHEASIAL-EDREEKLDAIYEEIEKDLILIGASAVEDKLQDGVPQTIEQLAKADIKIWVL 680
Query: 741 TGDKMETAINIGFACSLLRQGMKQICITALNS-DSVGKAAKEAVK-------DNILMQ-- 790
TGDK ETA NIG++C++LR+ M +I I A N+ + V + A K D M+
Sbjct: 681 TGDKQETAENIGYSCNMLREEMTEIFIVAANTAEEVREELVNARKKMSPESGDEPPMEKS 740
Query: 791 --ITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQ 848
+ SQ+++ E+ Y L+I G +LA+AL+ DM+ L A C +VICCRV+P Q
Sbjct: 741 RFLGKKSQVVEDEK-VDGEYGLVINGHSLAFALQKDMQVELLRTACMCQTVICCRVTPLQ 799
Query: 849 KALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFL 908
KA V LVK+ TLAIGDGANDV MI+ A IG+GISG EGMQAV++SDFS AQFR+L
Sbjct: 800 KAQVVELVKKHKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGMQAVLSSDFSFAQFRYL 859
Query: 909 ERLLVVHGHWCYKRI 923
+RLL+VHG W Y R+
Sbjct: 860 QRLLLVHGRWSYLRM 874
|
|
| ASPGD|ASPL0000000502 AN6112 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 878 (314.1 bits), Expect = 1.9e-169, Sum P(2) = 1.9e-169
Identities = 191/426 (44%), Positives = 265/426 (62%)
Query: 506 DSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNE-ETGNLTYEAESPDEAAFLVAAR 564
D + + N P D + F +LA CHT IPE +E + + Y+A SPDE A + A
Sbjct: 646 DFKKLRQNLESHPTKDAIHHFLTLLATCHTVIPERSEADPDKIKYQAASPDEGALVEGAA 705
Query: 565 EFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLL 624
G++F R SV I GQ E E+++L + +F S RKRMS I R DG+I +
Sbjct: 706 RMGYKFSNRKPRSVIITVA----GQ--EYEYELLAVCEFNSTRKRMSTIFRCPDGRIRIY 759
Query: 625 CKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKA 684
KGAD++I +RL ++ + E T + L EY GLRTL LA +++ E E+ W F KA
Sbjct: 760 IKGADTVILERLHQDNPIVE-GTLQHLEEYASDGLRTLCLAMREIPEDEFQQWYQIFDKA 818
Query: 685 KSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDK 744
+++G +R L+ ++++EKD L+GATA ED+LQ GVP I L AG+KIWVLTGD+
Sbjct: 819 ATTVGGNRAEELDKAAELIEKDFYLLGATAKEDRLQDGVPDTIHTLQTAGIKIWVLTGDR 878
Query: 745 METAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804
ETAINIG +C L+ + M + + N DS EA +DN+ ++ + E+
Sbjct: 879 QETAINIGMSCKLISEDMTLLIV---NEDSA-----EATRDNLTKKLQAVQSQTEAEQ-- 928
Query: 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICC--RVSPKQKALVTRLVKEGTGK 862
ALII+G++L +ALE DM+ FL LAV C +V+CC RVSP QKALV +LVK
Sbjct: 929 ---MALIIDGRSLTFALEKDMEKLFLDLAVLCKAVVCCCSRVSPLQKALVVKLVKRHLKS 985
Query: 863 TTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKR 922
LAIGDGANDV MIQ A +G+GISGVEG+QA ++D SIAQFR+L +LL+VHG W Y R
Sbjct: 986 LLLAIGDGANDVSMIQAAHVGVGISGVEGLQAARSADVSIAQFRYLRKLLLVHGAWSYHR 1045
Query: 923 IAQMVI 928
I+++++
Sbjct: 1046 ISRVIL 1051
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LNQ4 | ALA4_ARATH | 3, ., 6, ., 3, ., 1 | 0.7274 | 0.9850 | 0.7565 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| eugene3.00440139 | aminophospholipid ATPase (1227 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 934 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-70 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 7e-51 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-41 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 8e-25 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 4e-24 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-20 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 4e-15 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 3e-13 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 2e-10 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-10 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-09 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-07 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 4e-06 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-05 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-05 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 4e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 1090 bits (2822), Expect = 0.0
Identities = 436/877 (49%), Positives = 583/877 (66%), Gaps = 46/877 (5%)
Query: 54 YCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIV 112
+C+N ISTTKY ++ PK LFEQF R AN+YFL+ ALL P LSP + ++PLA V
Sbjct: 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60
Query: 113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPA 172
+ V+ KEA+ED RR +DKEVN R V G+G F PW+ ++VGDIVKV+KD+ PA
Sbjct: 61 LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120
Query: 173 DLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPS 232
DLL LSSS DG+CYVET NLDGETNLK+++A+E T + +++ K F+G ++CE PN S
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNAS 180
Query: 233 LYTFVGNIEY-DRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKR 291
LY+F GN+ Y + P ILLR LRNT V G V++TGHD+K+M+NAT +PSKR
Sbjct: 181 LYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240
Query: 292 SGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVP 351
S +EK+++ +I ILF +L ++ LISS+G + + WY++ +
Sbjct: 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDV-----SERNAAAN 295
Query: 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEE 411
G +T LIL+ LIPISLYVS+E+VK +QA FIN D+ MY +++ PA RTSNLNEE
Sbjct: 296 GFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEE 355
Query: 412 LGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESAN 471
LGQV+ I SDKTGTLT N M+F KCS+AG +YG +E++ +++ +E +N
Sbjct: 356 LGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENSM--- 412
Query: 472 AKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILA 531
KGF F D RL+D +PN + FF LA
Sbjct: 413 ------------------------LVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALA 448
Query: 532 ICHTAIPELNEE-TGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590
+CHT +PE N++ +TY+A SPDEAA + AAR+ GF F+ RT S+ +
Sbjct: 449 LCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEM----HG 504
Query: 591 VEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKL 650
+E++ILN+L+F S RKRMSVIVR+ DG+I LLCKGAD++IF RLS G E T +
Sbjct: 505 ETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEH 564
Query: 651 LNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILV 710
L Y GLRTL +AY++L E EY WN E+ +A +++ DRE L+ V++ +EKDLIL+
Sbjct: 565 LENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKLDVVAESIEKDLILL 623
Query: 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL 770
GATA+EDKLQ+GVP+ I+ L QAG+KIWVLTGDK+ETAINIG++C LL + M+QI I
Sbjct: 624 GATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVI--- 680
Query: 771 NSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFL 830
SDS+ A +V+ I + S+ D AL+I+GK+L YAL+++++ FL
Sbjct: 681 TSDSLD--ATRSVEAAIKFGLEGTSEEFNNLGD-SGNVALVIDGKSLGYALDEELEKEFL 737
Query: 831 GLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVE 890
LA++C +VICCRVSP QKA V RLVK+ TGKTTLAIGDGANDV MIQEAD+G+GISG E
Sbjct: 738 QLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKE 797
Query: 891 GMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMV 927
GMQAVMASDF+I QFRFL +LL+VHG W YKRI++M+
Sbjct: 798 GMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMI 834
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 630 bits (1625), Expect = 0.0
Identities = 353/921 (38%), Positives = 525/921 (57%), Gaps = 82/921 (8%)
Query: 37 RVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP 96
R++Y N P +R ++ N I T KY+ FS+ P+ LFEQF+RVA IYFL+ A+L+ P
Sbjct: 71 RLVYLNDPEKSNER-FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLP 129
Query: 97 -LSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEK 155
L+ F + +LPLA V+ V+ K+A EDWRR D+ N R V V + F K W+
Sbjct: 130 QLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQ-FQEKKWKD 188
Query: 156 IQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEAT-SPLNED 214
I+VG+I+K++ + P D++ LS+S G+ YV+T+NLDGE+NLK + A + T S + E
Sbjct: 189 IRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEK 248
Query: 215 EAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFT 274
E + G +KCE PN ++Y F N+E D + ++ PS I+LR +L+NTA G ++
Sbjct: 249 E---KINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYC 305
Query: 275 GHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYL 334
G ++K M N + +PSKRS +E +M+ I IL L+ + I S+ AV W
Sbjct: 306 GRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAV--------WLRR 357
Query: 335 KPKETDVY-------FNPGKP-----LVPGLAHLVT---ALILYGYLIPISLYVSIEIVK 379
E D F+ G P G T ++I++ +IPISLY+S+E+V+
Sbjct: 358 HRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVR 417
Query: 380 FLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVA 439
QA F+ +D MYD+ S Q R N+NE+LGQ+ + SDKTGTLT N+M+F S+
Sbjct: 418 VGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477
Query: 440 GTAY--GVSPSEVELAAAKQMAIDLEEQN-RESANAKHKNSGSEIELETVITSNDGNDFK 496
G Y G +P++ + A +++++ + R K ++ + + S G D +
Sbjct: 478 GVDYSDGRTPTQNDHA---GYSVEVDGKILRPKMKVK-------VDPQLLELSKSGKDTE 527
Query: 497 RRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLT-----YEA 551
E + D FF LA C+T +P + ++T + T Y+
Sbjct: 528 --------EAKHVHD--------------FFLALAACNTIVPIVVDDTSDPTVKLMDYQG 565
Query: 552 ESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVERE-FKILNLLDFTSKRKRM 610
ESPDE A + AA +GF RT + I ER+ F +L L +F S RKRM
Sbjct: 566 ESPDEQALVYAAAAYGFMLIERTSGHIVIDIHG-------ERQRFNVLGLHEFDSDRKRM 618
Query: 611 SVIVRDEDGQILLLCKGADSIIFDRLSKNGRM-YEEATTKLLNEYGEAGLRTLALAYKQL 669
SVI+ D + + KGAD+ +F + ++ M AT L+ Y GLRTL + ++L
Sbjct: 619 SVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMREL 678
Query: 670 DESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDK 729
++SE+ W+ F+ A +++ R A L V+ +E +L ++GA+A+EDKLQ+GVP+ I+
Sbjct: 679 NDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIES 737
Query: 730 LAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEA-VKDNIL 788
L AG+K+WVLTGDK ETAI+IG++ LL M QI I + + +S K+ ++A V L
Sbjct: 738 LRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797
Query: 789 MQITNASQMIKL-ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK 847
++ SQ ALII+G +L Y L+ +++ LA +C+ V+CCRV+P
Sbjct: 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPL 857
Query: 848 QKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF 907
QKA + LVK T TLAIGDGANDV MIQ AD+G+GISG EG QAVMASDF++ QFRF
Sbjct: 858 QKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRF 917
Query: 908 LERLLVVHGHWCYKRIAQMVI 928
L LL+VHGHW Y+R+ M++
Sbjct: 918 LVPLLLVHGHWNYQRMGYMIL 938
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 252 bits (645), Expect = 1e-70
Identities = 111/417 (26%), Positives = 171/417 (41%), Gaps = 104/417 (24%)
Query: 521 DTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580
LL F A+C++ PE N Y+A P E A + A + GF
Sbjct: 387 PALLRFLLAAALCNSVTPEKNGW-----YQAGDPTEGALVEFAEKLGFSLDLS------- 434
Query: 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNG 640
+E E+ IL + F S+RKRMSVIV+ ++G+ +L KGA +I +R G
Sbjct: 435 ---------GLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIG 485
Query: 641 R---MYEEATTKLL---NEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREA 694
+ EE L E GLR LA+AYK+LD +E
Sbjct: 486 ELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDD------------------ 527
Query: 695 TLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754
D +E DL+ +G T +ED ++ V + I++L +AG+K+W++TGD +ETAI I
Sbjct: 528 ----EVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE 583
Query: 755 CSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEG 814
C + + AL+I+G
Sbjct: 584 CGIEAEAES---------------------------------------------ALVIDG 598
Query: 815 KTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDV 874
L +++ L E + + RVSP+QKA + +++ +G GDG ND
Sbjct: 599 AELDALSDEE----LAELVEELS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDA 651
Query: 875 GMIQEADIGIGISGVEGMQAVMASD--FSIAQFRFLERLLVVHGHWCYKRIAQMVII 929
++ AD+GI + G EG A + + L VV G Y I + ++
Sbjct: 652 PALKAADVGIAMGG-EGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILY 707
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 187 bits (478), Expect = 7e-51
Identities = 83/355 (23%), Positives = 134/355 (37%), Gaps = 73/355 (20%)
Query: 103 VSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIV 162
+ L L V+ V K ED R + D+ VN R +V P + + GD+V
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWKE--IPAKDLVPGDVV 58
Query: 163 KVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTG 222
V+ + PAD + LS S C+V+ NL GE+N +K A++ T +G
Sbjct: 59 LVKSGETVPADGVLLSGS-----CFVDESNLTGESNPVLKTALKETQ-----------SG 102
Query: 223 TVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ 282
T+ + Y F G + +++ + + T V+ TG +++
Sbjct: 103 TITGDLVFAGTYVFGGTLI------------VVVTPTGILTTVGRIAVVVKTGFETR--- 147
Query: 283 NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVY 342
T SKR +E IFILF +L+ +++ + +
Sbjct: 148 --TPLQSKRDRLEN----FIFILFLLLLALAVFLYLFIRGWDPNS---IFKA-------- 190
Query: 343 FNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQ 402
L+ ALI+ ++P +L ++ + D +
Sbjct: 191 -------------LLRALIVLVIVVPPALPAAVTVALA------VGDARLAKK----GIL 227
Query: 403 ARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQ 457
R N EELG+VD + SDKTGTLT N+M + G S S V
Sbjct: 228 VRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSSLVACDNNYL 282
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 164 bits (418), Expect = 1e-41
Identities = 79/392 (20%), Positives = 140/392 (35%), Gaps = 74/392 (18%)
Query: 53 KYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLS--VTPLSPFSP-VSMLLPL 109
+ S K L + + + L+AALLS V ++L +
Sbjct: 54 LKKYGPNELPEEKKRSLLKKFLRQFKDPFIIL-LLVAALLSAFVGDWVDAGVDAIVILLV 112
Query: 110 AIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQF 169
++ + + + K++++ K V + +G F P ++ GDIV +E
Sbjct: 113 VVINALLGFVQEYRAEKALEALKKMSSPKAKV-LRDGKFVEIPASELVPGDIVLLEAGDV 171
Query: 170 FPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENP 229
PADL L SS V+ L GE+ K+A +
Sbjct: 172 VPADLRLLESSDL----EVDESALTGESLPVEKQA-------------------LPLTKS 208
Query: 230 NPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPS 289
+ L +D +L + + + G V+ TG +++ + A P+
Sbjct: 209 DAPL--------------GLDRDNMLFSGTTVVSG-RAKGIVVATGFETEFGKIARLLPT 253
Query: 290 KRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPL 349
K+ ++ + + + L L++++L+ V + + +
Sbjct: 254 KKE-VKTPLQRKLNKLGKFLLVLALVLGALVFVV------GLFRGGNGLLESFL------ 300
Query: 350 VPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLN 409
TAL L +P L + I L A + +D ++ R+ N
Sbjct: 301 --------TALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIV----------RSLNAI 342
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGT 441
E LG VD I SDKTGTLT N+M K + G
Sbjct: 343 ETLGSVDVICSDKTGTLTQNKMTVKKIYINGG 374
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 8e-25
Identities = 58/220 (26%), Positives = 82/220 (37%), Gaps = 61/220 (27%)
Query: 538 PELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597
+ + Y + P E A L +A G E+KI
Sbjct: 270 NSSSLVACDNNYLSGDPMEKALLKSAELVGKADKGNK-------------------EYKI 310
Query: 598 LNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEA 657
L++ F+S KRMSVIV DG LL KGA I +R + YEE E
Sbjct: 311 LDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCN----NYEEK----YLELARQ 362
Query: 658 GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVED 717
GLR LA A K+L++ DL +G ED
Sbjct: 363 GLRVLAFASKELED----------------------------------DLEFLGLITFED 388
Query: 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757
L+ + I++L AG+K+ ++TGD + TA I +
Sbjct: 389 PLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGI 428
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 4e-24
Identities = 117/509 (22%), Positives = 177/509 (34%), Gaps = 138/509 (27%)
Query: 413 GQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANA 472
G++D DKTGTLT + +D GV
Sbjct: 446 GKIDVCCFDKTGTLTEDGLDLR---------GVQGLS----------------------- 473
Query: 473 KHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAI 532
+ +++ T EDS L K LA
Sbjct: 474 ---GNQEFLKIVT-------------------EDSSLKPSITHK------------ALAT 499
Query: 533 CHTAIPELNE------------ETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580
CH ++ +L E T E + DE+A T +
Sbjct: 500 CH-SLTKLEGKLVGDPLDKKMFEATGWTLEED--DESAE-------------PTSILAVV 543
Query: 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDED-GQILLLCKGADSIIFDRLSKN 639
R PP+ E I+ F+S +RMSVIV D KGA I S
Sbjct: 544 RTDDPPQ------ELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE 597
Query: 640 G--RMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLE 697
Y+E +L Y G R LALAYK+L + + Q R+A
Sbjct: 598 TVPSDYQE----VLKSYTREGYRVLALAYKELPKLTL----QKAQDLS------RDA--- 640
Query: 698 HVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757
+E +L +G E+ L+ + I +L +A ++ ++TGD TA+++ C +
Sbjct: 641 -----VESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGI 695
Query: 758 LRQGMKQICITALNSDSV-GKAAKEAVKDNILMQITNASQMIK-----LERDPHAAYALI 811
+ I A +S K V D+I T +E + Y L
Sbjct: 696 VNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLA 755
Query: 812 IEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGA 871
+ GK A L L + R++P QK + L+++ T GDGA
Sbjct: 756 MSGKAFAVLQAHS-PELLLRLLSHTT--VFARMAPDQKETLVELLQK-LDYTVGMCGDGA 811
Query: 872 NDVGMIQEADIGIGISGVEGMQAVMASDF 900
ND G +++AD+GI +S E A +A+ F
Sbjct: 812 NDCGALKQADVGISLSEAE---ASVAAPF 837
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 96.8 bits (241), Expect = 2e-20
Identities = 126/514 (24%), Positives = 182/514 (35%), Gaps = 138/514 (26%)
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRES 469
E LG I SDKTGTLT NQM SV K +A+D
Sbjct: 284 ETLGCTTVICSDKTGTLTTNQM-----SVC----------------KVVALD-------- 314
Query: 470 ANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRI 529
S L N+F + E + D + L I
Sbjct: 315 --------PSSSSL---------NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATI 357
Query: 530 LAICHTAIPELNEETGNLTYEAES-PDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKG 588
A+C+ + + NE G YE EAA V + G + S R
Sbjct: 358 AALCNDSSLDFNERKG--VYEKVGEATEAALKVLVEKMGLPATKNGVS--SKRRPALGCN 413
Query: 589 QPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDR----LSKNGR--- 641
+FK L L+F+ RK MSV+ + G L + KGA + +R L+ +GR
Sbjct: 414 SVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFV-KGAPEGVLERCTHILNGDGRAVP 472
Query: 642 ----MYEEATTKLLNEYGEAGLRTLALAYKQ-LDESEYSAWNSEFQKAKSSIGADREATL 696
M + + LR LALA+K D E A
Sbjct: 473 LTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-------------DLLSDPANF 519
Query: 697 EHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACS 756
E + E DL +G + D + V I+K AG+++ ++TGD ETA I C
Sbjct: 520 EAI----ESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAI---C- 571
Query: 757 LLRQGMKQICITALNSDSVGKA--AKEAVKDNILMQITNASQMIKLERDPHAAYALIIEG 814
++I I + + D K+ +E ++ A Q
Sbjct: 572 ------RRIGIFSPDEDVTFKSFTGRE------FDEMGPAKQ------------------ 601
Query: 815 KTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDV 874
A ++V+ RV P K+ + L++E G+ GDG ND
Sbjct: 602 -----------------RAACRSAVLFSRVEPSHKSELVELLQE-QGEIVAMTGDGVNDA 643
Query: 875 GMIQEADIGIGI-SGVEGMQAVMASDFSIAQFRF 907
+++ADIGI + SG E A ASD +A F
Sbjct: 644 PALKKADIGIAMGSGTE--VAKEASDMVLADDNF 675
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 79.8 bits (197), Expect = 4e-15
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 33/183 (18%)
Query: 589 QPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSII----FDRLSKNGRMYE 644
Q V E K++ + F S+RK MSV+V+ G+ KGA I+ RL NG
Sbjct: 466 QEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATP 525
Query: 645 ------EATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEH 698
+ ++ LRT+ LAY+ E+ +
Sbjct: 526 ISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYP------------------ 567
Query: 699 VSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758
K L L+G ++D L+ GV + + + +AG+ + ++TGD ++TA I C +L
Sbjct: 568 -----NKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGIL 622
Query: 759 RQG 761
G
Sbjct: 623 TFG 625
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 3e-13
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 20/109 (18%)
Query: 531 AICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590
A+C+ A NEE + P E+A LV A + G + +R RYP
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGD-PTESALLVFAEKLGIDVEE-------LRARYP----- 47
Query: 591 VEREFKILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSK 638
+ + F S+RKRMS + + E D L KGA I +R S
Sbjct: 48 ------RVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILERCST 90
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 2e-10
Identities = 95/488 (19%), Positives = 149/488 (30%), Gaps = 175/488 (35%)
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRES 469
E LG V+ I SDKTGTLT N M K + L A
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKI------WTSDGLHTMLNAV-------------- 358
Query: 470 ANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRI 529
S + VI D + GF +
Sbjct: 359 ---------SLNQFGEVIVDGD------VLHGFYTVAVSRI----------------LEA 387
Query: 530 LAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589
+C+ A + E L +P + A + +FG + R T V P
Sbjct: 388 GNLCNNA--KFRNEADTLL---GNPTDVALIELLMKFGLDDLRETYIRV---AEVP---- 435
Query: 590 PVEREFKILNLLDFTSKRKRMSV-IVRDEDGQILLLCKGADSIIFDR----LSKNGRMYE 644
F+S+RK M+V V +D + KGA + K+G+
Sbjct: 436 -------------FSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLT 482
Query: 645 ------EATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEH 698
+ + E AGLR +A A
Sbjct: 483 LTQQQRDVIQEEAAEMASAGLRVIAFASGPE----------------------------- 513
Query: 699 VSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758
+ L +G + D + GV + + L G++I ++TGD ETA++I
Sbjct: 514 -----KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA------ 562
Query: 759 RQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818
+++ + + S SV +A+ D L QI P A
Sbjct: 563 ----RRLGMPSKTSQSVSGEKLDAMDDQQLSQIV-----------PKVA----------- 596
Query: 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQ 878
+ R SP+ K + + +++ G GDG ND ++
Sbjct: 597 ---------------------VFARASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALK 634
Query: 879 EADIGIGI 886
ADIG+ +
Sbjct: 635 LADIGVAM 642
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 3e-10
Identities = 99/480 (20%), Positives = 180/480 (37%), Gaps = 97/480 (20%)
Query: 294 IEKKMDKIIFILFAILVLISLI--SSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVP 351
+ +K+ K+ ILF I ++ ++I ++ F V KE +Y
Sbjct: 275 LHRKLSKLAVILFCIAIIFAIIVMAAHKFDVD-------------KEVAIY--------- 312
Query: 352 GLAHLVTALILYGYLIPISLYVSIEIVKFL-QAIFINQDISMYDDESGIPAQARTSNLNE 410
A+ L +IP SL + I + A +++ + R + E
Sbjct: 313 -------AICLAISIIPESLIAVLSITMAMGAANMSKRNVIV-----------RKLDALE 354
Query: 411 ELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESA 470
LG V+ I SDKTGT+T +M + + +G ++ID N + A
Sbjct: 355 ALGAVNDICSDKTGTITQGKM--IARQIWIPRFGT------------ISID----NSDDA 396
Query: 471 NAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRIL 530
++ + S I + + + I F+D L + + ++ ++D +
Sbjct: 397 FNPNEGNVSGIPRFSPYEYSHNEAADQDILK-EFKD-ELKEIDLPEDIDMDLFIKLLETA 454
Query: 531 AICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRT------QSSVFIRERY 584
A+ + A ++ T + P E A V A++F T +S+ +
Sbjct: 455 ALANIATVFKDDATDCWKAHGD-PTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSL 513
Query: 585 PPKGQ-PVEREFKILNLLDFTSKRKRMSVIVRDEDGQIL-LLCKGADSIIFDRLSK-NGR 641
+ P +F+ + F S+ KRM+ I D G+ + KGA I + S NG+
Sbjct: 514 SQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGK 573
Query: 642 MYEEATT----------KLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGAD 691
+ + + GLR LA A K D+++ + + + +
Sbjct: 574 DGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKAD--NNDDQLKNETLN---- 627
Query: 692 REATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINI 751
E DL +G + D + ++K QAG+ + +LTGD ETA I
Sbjct: 628 --------RATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAI 679
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 2e-09
Identities = 73/301 (24%), Positives = 106/301 (35%), Gaps = 100/301 (33%)
Query: 602 DFTSKRKRMSVIVRDEDGQILLLCKGADSIIF---DRLSKNGRMYE---------EATTK 649
DF R+RMSV+V + L+CKGA I ++ NG + + T
Sbjct: 450 DFE--RRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTD 507
Query: 650 LLNEYGEAGLRTLALAYKQL--DESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDL 707
LN GLR +A+A K L E +Y +D E DL
Sbjct: 508 TLN---RQGLRVVAVATKYLPAREGDYQ-----------------------RAD--ESDL 539
Query: 708 ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICI 767
IL G A D ++ + L +G+ + +LTGD A ++C
Sbjct: 540 ILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVA--------------AKVC- 584
Query: 768 TALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKH 827
VG A E + + IE L DD
Sbjct: 585 -----HEVGLDAGEVLIGS------------------------DIE------TLSDDE-- 607
Query: 828 HFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887
L E ++ R++P K + L+K G +GDG ND ++ ADIGI +
Sbjct: 608 --LANLAERTTLF-ARLTPMHKERIVTLLK-REGHVVGFMGDGINDAPALRAADIGISVD 663
Query: 888 G 888
G
Sbjct: 664 G 664
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 2e-07
Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 33/168 (19%)
Query: 586 PKGQPVEREFKILNL-LDFTSKRKRMSVIVRDEDGQILLLCKGADS---IIFDRLSKNGR 641
P+ K+ L DF R+R+SV+V D GQ LL+CKGA + +
Sbjct: 431 PEIVKPAGYRKVDELPFDFV--RRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDT 488
Query: 642 MYE------EATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREAT 695
+ E L Y G R L +A +++ E +A+ S AD
Sbjct: 489 VRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGE--------SRAQYST-AD---- 535
Query: 696 LEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGD 743
E+DL++ G D ++ I L + G+ + VLTGD
Sbjct: 536 --------ERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 4e-06
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 10/95 (10%)
Query: 833 AVECASVICCRVSPKQKA-LVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEG 891
A E + RVSP+QK +V L K+G GDG ND +++AD+GI +
Sbjct: 423 AKELGIDVFARVSPEQKLQIVEALQKKG--HIVAMTGDGVNDAPALKKADVGIAMG---- 476
Query: 892 MQAVMASDFSIAQFRFLERLLVV-HGHWCYKRIAQ 925
A A+D + + V G + I
Sbjct: 477 --AKAAADIVLLDDDLSAIVKAVKEGRKIFSNIKS 509
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 1e-05
Identities = 91/388 (23%), Positives = 153/388 (39%), Gaps = 99/388 (25%)
Query: 528 RILAICHTAIPELNEETGNLTYEAESPD--EAAFLVAAREFGFEFYRRTQSSVF-IRERY 584
RI +C+ A+ + +E + A + D E+A L + SV +RER
Sbjct: 397 RIAGLCNRAVFKAGQENVPILKRAVAGDASESALL--------KCIELCLGSVMEMRERN 448
Query: 585 PPKGQPVEREFKILNLLDFTSKRKRMSVIVRDED---GQILLLCKGADSIIFDRLSK--- 638
P K++ + F S K I +ED + LL+ KGA I +R S
Sbjct: 449 P----------KVVEI-PFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILI 497
Query: 639 NGRM------YEEATTKLLNEYGEAGLRTLALAYKQLDESEYS---AWNSEFQKAKSSIG 689
+G+ +EA E G G R L + L + ++ ++++ +
Sbjct: 498 HGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTD-- 555
Query: 690 ADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749
+L VG ++ D + VP + K AG+K+ ++TGD TA
Sbjct: 556 ----------------NLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAK 599
Query: 750 NIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYA 809
I K + I + +++V A + NI + N P A A
Sbjct: 600 AIA----------KGVGIISEGNETVEDI---AARLNIPVSQVN----------PRDAKA 636
Query: 810 LIIEGKTL----AYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGK 862
++ G L + L++ +K+H ++ R SP+QK ++ EG G
Sbjct: 637 CVVHGSDLKDMTSEQLDEILKYH--------TEIVFARTSPQQKLIIV----EGCQRQGA 684
Query: 863 TTLAIGDGANDVGMIQEADIGI--GISG 888
GDG ND +++ADIG+ GI+G
Sbjct: 685 IVAVTGDGVNDSPALKKADIGVAMGIAG 712
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 2e-05
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 32/158 (20%)
Query: 595 FKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFD---RLSKNGRM--YEEATTK 649
+K ++ + F R+R+SV+V + L+CKGA + G + E+
Sbjct: 406 WKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKS 465
Query: 650 LL----NEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEK 705
L E G+R +A+A K L E ++F K E+
Sbjct: 466 ELQDMTAEMNRQGIRVIAVATKTLKVGE-----ADFTKTD------------------EE 502
Query: 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGD 743
LI+ G D ++ + I L + G+ + VLTGD
Sbjct: 503 QLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGD 540
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 43/278 (15%), Positives = 93/278 (33%), Gaps = 88/278 (31%)
Query: 109 LAIVVGVSMAKEALEDWR---RFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVE 165
+ ++V ++ EA +++R K++ + + +G P +++ VGDIV ++
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 166 KDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVK 225
PAD + G V+ L GE+ K
Sbjct: 62 PGDRVPADGRIIE-----GSLEVDESALTGESLPVEK----------------------- 93
Query: 226 CENPNPSLY--TFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDS---KV 280
+ +++ T V + + V TG D+ K+
Sbjct: 94 --SRGDTVFAGTVVLS-------------------------GELKVIVTATGEDTELGKI 126
Query: 281 MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340
+ + S ++ +++ +DK+ ILV I L +I +
Sbjct: 127 ARLVEEAKSAKTPLQRLLDKLA----KILVPIVLALAILVFL------------------ 164
Query: 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIV 378
++F G + L + L+ P +L +++ +
Sbjct: 165 IWFFRGGDFLEALLRALAVLV---AACPEALPLAVPLA 199
|
Length = 222 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 845 SPKQKALVTRLVKEGTGKT-TLAIGDGANDVGMIQEADIGIGISGVEGMQAV 895
S K K L+ L KEG T+A+GDGAND+ MI+ A +GI + +Q
Sbjct: 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQK 202
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 934 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.97 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.85 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.53 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.48 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.22 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.14 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.1 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.07 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.07 | |
| PLN02887 | 580 | hydrolase family protein | 99.06 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.05 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.04 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.93 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.91 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.91 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.9 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.9 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.85 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.82 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.78 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.63 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.6 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.56 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.55 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.53 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.53 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.52 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.46 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.42 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.38 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.37 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.34 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.33 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.29 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.29 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.24 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.23 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.21 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.16 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.09 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.06 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 98.03 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.99 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.88 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.84 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.8 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.78 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.77 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.66 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.57 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.57 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.55 | |
| PLN02423 | 245 | phosphomannomutase | 97.49 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.46 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.39 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.35 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.33 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.25 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.2 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.19 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.19 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.16 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.1 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.06 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.05 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.04 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.93 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.93 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.91 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.85 | |
| PLN03017 | 366 | trehalose-phosphatase | 96.84 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.72 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.66 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 96.63 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.6 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.52 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.52 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.46 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.44 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 96.39 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.37 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.37 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.29 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.15 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.11 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.09 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.98 | |
| PLN02940 | 382 | riboflavin kinase | 95.95 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.92 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.82 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.76 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.69 | |
| PLN02811 | 220 | hydrolase | 95.66 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.64 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.57 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.35 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.24 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.24 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.21 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.15 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 94.84 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.65 | |
| PLN02151 | 354 | trehalose-phosphatase | 94.6 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.58 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 94.51 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 94.3 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.08 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.05 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.99 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 93.71 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 93.52 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 93.38 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 93.24 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 92.95 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.81 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 92.63 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 92.48 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 92.29 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.18 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 92.11 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 91.73 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 91.58 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 91.38 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 91.09 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 90.49 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 90.11 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 89.7 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 89.62 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 89.38 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 88.16 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 87.66 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 86.58 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 85.57 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 85.43 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 85.37 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 84.13 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 83.22 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 82.44 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 81.63 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 81.43 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 81.15 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 81.01 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-160 Score=1415.73 Aligned_cols=853 Identities=60% Similarity=0.994 Sum_probs=770.8
Q ss_pred CCCCeEEEeCCCCCCCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHH
Q 002339 33 QGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIV 112 (934)
Q Consensus 33 ~~~~r~~~~~~~~~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v 112 (934)
++.+|++++|+|+.+..+...|..|+|+|+||++++|||++||+||+|++|+|||++++++++|++|++++++++||+++
T Consensus 11 ~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~v 90 (1151)
T KOG0206|consen 11 PGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFV 90 (1151)
T ss_pred CCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeee
Confidence 45689999999966556677999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeec
Q 002339 113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN 192 (934)
Q Consensus 113 ~~~~~~~~~~~~~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~ 192 (934)
+.++++||++||++|+++|+++|++++.|+++++.++...|++|+|||+|++..+|.+|||++||+|++++|.|||+|++
T Consensus 91 l~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~n 170 (1151)
T KOG0206|consen 91 LGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETAN 170 (1151)
T ss_pred ehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEee
Confidence 99999999999999999999999999999954445999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEE
Q 002339 193 LDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (934)
Q Consensus 193 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv 272 (934)
|||||++|.|++...+......+.+.+++|.|.||.||.++|.|.|++..+++..|++.+|+++|||+|+||+|++|+|+
T Consensus 171 LDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv 250 (1151)
T KOG0206|consen 171 LDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVV 250 (1151)
T ss_pred cCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEE
Confidence 99999999999988887654566678899999999999999999999998888779999999999999999999999999
Q ss_pred EeccchhhhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCC---CccccCCCCCccccCCCCCc
Q 002339 273 FTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTP---QWWYLKPKETDVYFNPGKPL 349 (934)
Q Consensus 273 ~tG~~Tki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 349 (934)
+||+|||+|+|...++.|++++++.+|+.+..++++++++|+++++...+|...... .+||+.... +.
T Consensus 251 ~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~~ 321 (1151)
T KOG0206|consen 251 FTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSE---------AA 321 (1151)
T ss_pred EcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCch---------HH
Confidence 999999999999999999999999999999999999999999999999999874432 367764321 33
Q ss_pred hhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeec
Q 002339 350 VPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCN 429 (934)
Q Consensus 350 ~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n 429 (934)
...+..|++++++++.++|+||++++++++++|+++|.+|.+||+++.+.++.+|+++++|+||||++|++|||||||+|
T Consensus 322 ~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N 401 (1151)
T KOG0206|consen 322 YAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQN 401 (1151)
T ss_pred HHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccc
Q 002339 430 QMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRL 509 (934)
Q Consensus 430 ~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (934)
.|.|++|+++|..|+...++.+.....+.+. .......+++.|.|+.+
T Consensus 402 ~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~f~~~~~ 449 (1151)
T KOG0206|consen 402 SMEFKKCSINGTSYGRNVTEVEAALAKRSGG--------------------------------DVNEHKIKGFTFEDSRL 449 (1151)
T ss_pred eeeeecccccCcccccCCChhhcccCccccc--------------------------------cccccccccceeccchh
Confidence 9999999999999998766533221110000 00113456788999999
Q ss_pred cccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCC
Q 002339 510 MDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (934)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~ 589 (934)
.++.+...++...+.+|++++++||++.++.++++..+.|+++||||.|++++|+.+|+.+..|+++.+.++..+
T Consensus 450 ~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g----- 524 (1151)
T KOG0206|consen 450 VDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELG----- 524 (1151)
T ss_pred hccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccc-----
Confidence 998888888899999999999999999999976666899999999999999999999999999999999998433
Q ss_pred CceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeC
Q 002339 590 PVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQL 669 (934)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l 669 (934)
...+|++|+++||+|.|||||||||+|+|++.+||||||.+|++++..++....+...+|+++||.+||||||+|||++
T Consensus 525 -~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l 603 (1151)
T KOG0206|consen 525 -VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYREL 603 (1151)
T ss_pred -cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhcc
Confidence 3689999999999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHH
Q 002339 670 DESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (934)
Q Consensus 670 ~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~ 749 (934)
+++||.+|+++|++|++++ .||++.++++++.+|+||+++|+|++||+||+|||++|+.|++||||+||+|||+.|||+
T Consensus 604 ~e~eY~~w~~~~~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAi 682 (1151)
T KOG0206|consen 604 DEEEYEEWNERYNEAKTSL-TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAI 682 (1151)
T ss_pred CHHHHHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHH
Confidence 9999999999999999999 699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCcccCCceEEEEcCCCchhHHHHHH-HHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHH
Q 002339 750 NIGFACSLLRQGMKQICITALNSDSVGKAAK-EAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHH 828 (934)
Q Consensus 750 ~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~ 828 (934)
+||.+|+++++++.++.++..+.+....... ....+.+..+..........+... ...++++||+++.++++++....
T Consensus 683 NIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~ 761 (1151)
T KOG0206|consen 683 NIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKK 761 (1151)
T ss_pred HHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHH
Confidence 9999999999999999998877431111100 022233333332222211111112 47899999999999999988899
Q ss_pred HHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccch
Q 002339 829 FLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFL 908 (934)
Q Consensus 829 ~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~l 908 (934)
|..++..|++++|||++|.||+.+|+.+++..+..|+|||||+||++||++||||||++|.||+||.++|||.|.+|++|
T Consensus 762 Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL 841 (1151)
T KOG0206|consen 762 FLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFL 841 (1151)
T ss_pred HHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHH
Confidence 99999999999999999999999999998778999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhchhhhHHhhhheEEEeccC
Q 002339 909 ERLLVVHGHWCYKRIAQMVIIKDFPT 934 (934)
Q Consensus 909 ~~lll~~Gr~~~~~i~~~i~~~~~k~ 934 (934)
.+|||+||||+|.|++++++|+|||.
T Consensus 842 ~rLLLVHGhW~Y~R~a~~ilyfFYKN 867 (1151)
T KOG0206|consen 842 ERLLLVHGHWSYIRLAKMILYFFYKN 867 (1151)
T ss_pred hhhheeecceeHHHHHHHHHHHHHHH
Confidence 99999999999999999999999994
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-150 Score=1380.73 Aligned_cols=856 Identities=38% Similarity=0.629 Sum_probs=719.8
Q ss_pred CCeEEEeCCCCCCCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc-CCCCCccccchhhHHHH
Q 002339 35 CPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVV 113 (934)
Q Consensus 35 ~~r~~~~~~~~~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~-~~~~~~~~~~~~l~~v~ 113 (934)
..|.|++|++... +.+.+|++|.|+|+||++|+|||++||+||++++|+|||+++++|++| +++.+++++++||++++
T Consensus 69 ~~r~i~~~~~~~~-~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl 147 (1178)
T PLN03190 69 DARLVYLNDPEKS-NERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVL 147 (1178)
T ss_pred CceEEEcCCCCcc-cccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHH
Confidence 4799999987422 234579999999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecC
Q 002339 114 GVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNL 193 (934)
Q Consensus 114 ~~~~~~~~~~~~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~L 193 (934)
+++++++++||++|+++|+.+|+++++|+ ++|.+++++|++|+|||||+|++||.+|||++||+|++++|.|+|||++|
T Consensus 148 ~v~~ike~~Ed~~r~k~d~~~N~~~~~v~-~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~L 226 (1178)
T PLN03190 148 LVTAVKDAYEDWRRHRSDRIENNRLAWVL-VDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINL 226 (1178)
T ss_pred HHHHHHHHHHHHHHHHhHHhhcCcEEEEE-ECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEcccc
Confidence 99999999999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEE
Q 002339 194 DGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIF 273 (934)
Q Consensus 194 tGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~ 273 (934)
||||+|+.|.+++.+... .....++.|.|+||.||+++|.|.|++.++|+..+++.+|+++|||.|+||+|++|+|+|
T Consensus 227 dGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVY 304 (1178)
T PLN03190 227 DGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVY 304 (1178)
T ss_pred CCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEE
Confidence 999999999988765321 122345789999999999999999999999999999999999999999999999999999
Q ss_pred eccchhhhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCC-------
Q 002339 274 TGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPG------- 346 (934)
Q Consensus 274 tG~~Tki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 346 (934)
||+|||+++|...++.|+|++|+.+|+++.+++++++++|++++++..+|........||+.+.....+....
T Consensus 305 TG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 384 (1178)
T PLN03190 305 CGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYY 384 (1178)
T ss_pred echhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999998877764333345554331110000000
Q ss_pred CCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCce
Q 002339 347 KPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTL 426 (934)
Q Consensus 347 ~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTL 426 (934)
......+..|+.+++++..+||++|++++++++++|+++|.+|.+||++..+.++.||+++++|+||+|+|||+||||||
T Consensus 385 ~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTL 464 (1178)
T PLN03190 385 GWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTL 464 (1178)
T ss_pred hhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCcc
Confidence 00122356788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCcccc
Q 002339 427 TCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFED 506 (934)
Q Consensus 427 T~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (934)
|+|+|+|++|+++|..|+.+....+..... ... ...+ ....+ ....+.+
T Consensus 465 T~N~M~fk~~~i~g~~y~~~~~~~~~~~~~---~~~-------------------~~~~-------~~~~~--~~~~~~~ 513 (1178)
T PLN03190 465 TENKMEFQCASIWGVDYSDGRTPTQNDHAG---YSV-------------------EVDG-------KILRP--KMKVKVD 513 (1178)
T ss_pred ccceEEEEEEEECCEEcccccccchhhhhc---ccc-------------------cccc-------ccccc--cccccCC
Confidence 999999999999999997532211000000 000 0000 00000 0000011
Q ss_pred ccccccCC--CCCCChhHHHHHHHHHhhcceeeecccCC--C---CceEEecCChhHHHHHHHHHHCCcEEEeecCCeEE
Q 002339 507 SRLMDGNW--LKEPNVDTLLLFFRILAICHTAIPELNEE--T---GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (934)
Q Consensus 507 ~~~~~~~~--~~~~~~~~~~~~~~~l~lC~~~~~~~~~~--~---~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~ 579 (934)
..+..... ...+....+.+|+.++++||++.+...++ + ..+.|+++||||.||+++|+.+|+.+..|+++.+.
T Consensus 514 ~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~ 593 (1178)
T PLN03190 514 PQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 593 (1178)
T ss_pred HHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEE
Confidence 11111100 11122345778999999999999853211 1 24679999999999999999999999999999988
Q ss_pred EEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhcc-ccccHHHHHHHHHHHHhcC
Q 002339 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN-GRMYEEATTKLLNEYGEAG 658 (934)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~G 658 (934)
+...+ ....|++++++||+|+|||||||++++++.+++|+||||+.|+++|+.. +....+.+.+++++|+.+|
T Consensus 594 i~~~~------~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~G 667 (1178)
T PLN03190 594 IDIHG------ERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLG 667 (1178)
T ss_pred Eeecc------ceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcC
Confidence 86544 2678999999999999999999999988999999999999999999863 3346778899999999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEE
Q 002339 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (934)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ 738 (934)
+|||++|||.++++|+.+|.+.|.+|..++ .+|++.++++.+.+|+||+++|+++++|++|++++++|+.|+++||++|
T Consensus 668 lRtL~lA~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~ 746 (1178)
T PLN03190 668 LRTLVVGMRELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVW 746 (1178)
T ss_pred CceEEEEEEeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEE
Confidence 999999999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH----hhhhccCCCCCcEEEEEcC
Q 002339 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS----QMIKLERDPHAAYALIIEG 814 (934)
Q Consensus 739 mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~lvi~g 814 (934)
|+|||+.+||++||++|||+++++..+.++..+.+.+...+....... ....... .............+++++|
T Consensus 747 mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG 824 (1178)
T PLN03190 747 VLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMS--KKLTTVSGISQNTGGSSAAASDPVALIIDG 824 (1178)
T ss_pred EECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhh--hhccccccccccccccccccCCceEEEEEc
Confidence 999999999999999999999998888887665443322222111100 0000000 0000011123467899999
Q ss_pred hhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhH
Q 002339 815 KTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQA 894 (934)
Q Consensus 815 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a 894 (934)
.++..++++++.+.|.+++..|+++||||++|.||+++|+.+|+..+++|+|||||+||++||++||||||++|+||.||
T Consensus 825 ~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA 904 (1178)
T PLN03190 825 TSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQA 904 (1178)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHH
Confidence 99999998888889999999999999999999999999999998446899999999999999999999999999999999
Q ss_pred HHhCcEeecCccchhhhHhhhchhhhHHhhhheEEEeccC
Q 002339 895 VMASDFSIAQFRFLERLLVVHGHWCYKRIAQMVIIKDFPT 934 (934)
Q Consensus 895 ~~~AD~ii~~~~~l~~lll~~Gr~~~~~i~~~i~~~~~k~ 934 (934)
+.+|||+|.+|++|.+||++||||+|+|++++++|+|||.
T Consensus 905 ~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN 944 (1178)
T PLN03190 905 VMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRN 944 (1178)
T ss_pred HHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999984
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-141 Score=1318.69 Aligned_cols=837 Identities=52% Similarity=0.860 Sum_probs=715.7
Q ss_pred CCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc-CCCCCccccchhhHHHHHHHHHHHHHHHHHHhhhhh
Q 002339 54 YCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDK 132 (934)
Q Consensus 54 ~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~-~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~r~k~~~ 132 (934)
|++|.|+|+||++|+|+|++||+||++++|+|||+++++|++| +++.+++++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7899999999999999999999999999999999999999999 888999999999999999999999999999999999
Q ss_pred hhccceEEEEeCC-CeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCC
Q 002339 133 EVNARKVSVHVGN-GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPL 211 (934)
Q Consensus 133 ~~n~~~~~V~~r~-g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~ 211 (934)
.+|+++|+|+ |+ |++++++|++|+|||||+|++||.+|||++||+|++++|.|+||||+|||||+|+.|++...+...
T Consensus 81 ~~n~~~~~v~-~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~ 159 (1057)
T TIGR01652 81 EVNNRLTEVL-EGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM 159 (1057)
T ss_pred HHhCcEEEEE-CCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhcc
Confidence 9999999999 75 899999999999999999999999999999999999999999999999999999999998766555
Q ss_pred CChhhhhcCceEEEeeCCCCCcceeEEEEEECC-eeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhhccCCCCCc
Q 002339 212 NEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDR-ELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSK 290 (934)
Q Consensus 212 ~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g-~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~~~~~~~k 290 (934)
.....+..+.|.|.|+.|+++++.|.|++.+++ ...|++.+|+++|||.|+||+|++|+|+|||++||++++....+.|
T Consensus 160 ~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k 239 (1057)
T TIGR01652 160 LDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSK 239 (1057)
T ss_pred CChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCccc
Confidence 455667778999999999999999999999988 7789999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccch
Q 002339 291 RSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPIS 370 (934)
Q Consensus 291 ~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~ 370 (934)
+|++|+.+|+++.+++++++++|++++++..+|........||+..... ..+.....+..|++++++++.++|++
T Consensus 240 ~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~-----~~~~~~~~~~~~~~~~~L~~~~IPis 314 (1057)
T TIGR01652 240 RSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVS-----ERNAAANGFFSFLTFLILFSSLIPIS 314 (1057)
T ss_pred ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcc-----cccchhHHHHHHHHHHHHHhhhccee
Confidence 9999999999999999999999999998877776544344688753221 12223455678899999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcCeeccCCchHH
Q 002339 371 LYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEV 450 (934)
Q Consensus 371 L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~ 450 (934)
|+++++++++++++++++|.+||+++.+.++.+|+++++|+||+|++||+|||||||+|+|+|++|+++|..|+...+..
T Consensus 315 L~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~ 394 (1057)
T TIGR01652 315 LYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEI 394 (1057)
T ss_pred eeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchH
Confidence 99999999999999999999999887788999999999999999999999999999999999999999999998654332
Q ss_pred HHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCChhHHHHHHHHH
Q 002339 451 ELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRIL 530 (934)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 530 (934)
........+...+ . + .. .....+..++.++.+.+......+..+.+.+|+.++
T Consensus 395 ~~~~~~~~~~~~~---------------~----~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 447 (1057)
T TIGR01652 395 KDAIRERLGSYVE---------------N----E-------NS-MLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLAL 447 (1057)
T ss_pred HHHhhhccccccc---------------c----c-------cc-ccccccccccCcHHHHHhhhcCCchhHHHHHHHHHH
Confidence 1111100000000 0 0 00 000001123444443332222233445678999999
Q ss_pred hhcceeeeccc-CCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCce
Q 002339 531 AICHTAIPELN-EETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKR 609 (934)
Q Consensus 531 ~lC~~~~~~~~-~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkr 609 (934)
++||++.+..+ ++...+.|+++||+|.||+++|+.+|+.+.+|+.+.+.+.... .| ....|++++.+||+|+|||
T Consensus 448 ~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~--~~--~~~~~~il~~~pF~s~rKr 523 (1057)
T TIGR01652 448 ALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEM--HG--ETKEYEILNVLEFNSDRKR 523 (1057)
T ss_pred HhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEe--CC--CEEEEEEEEecccCCCCCe
Confidence 99999998762 2234578999999999999999999999999988744332211 11 2578999999999999999
Q ss_pred EEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhh
Q 002339 610 MSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIG 689 (934)
Q Consensus 610 msviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~ 689 (934)
|||||+++++++++|+||||+.|+++|+..++...+.+.+++++|+.+|+||+++|+|.++++|+.+|.++|.+|..++
T Consensus 524 mSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~- 602 (1057)
T TIGR01652 524 MSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL- 602 (1057)
T ss_pred EEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-
Confidence 9999999888999999999999999998654456778899999999999999999999999999999999999999998
Q ss_pred hcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcC
Q 002339 690 ADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITA 769 (934)
Q Consensus 690 ~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~ 769 (934)
.+|++.+++.++.+|+||+|+|+++++|+||++|+++|+.|++|||++||+|||+.+||+++|++||+++.+.+.+.+++
T Consensus 603 ~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~ 682 (1057)
T TIGR01652 603 TDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITS 682 (1057)
T ss_pred hhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEec
Confidence 79999999999999999999999999999999999999999999999999999999999999999999998888888877
Q ss_pred CCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhH
Q 002339 770 LNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQK 849 (934)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK 849 (934)
.+.++.... +..+..++....... .......+.+++++|++++.+++++++.+|.++...|+++||||++|+||
T Consensus 683 ~~~~~~~~~-----~~~i~~~~~~~~~~~-~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK 756 (1057)
T TIGR01652 683 ESLDATRSV-----EAAIKFGLEGTSEEF-NNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQK 756 (1057)
T ss_pred CchhhhHHH-----HHHHHHHHHHHHHhh-hhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHH
Confidence 654332111 111111111111111 01122456789999999999988888889999999999999999999999
Q ss_pred HHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccchhhhHhhhchhhhHHhhhheEE
Q 002339 850 ALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMVII 929 (934)
Q Consensus 850 ~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~l~~lll~~Gr~~~~~i~~~i~~ 929 (934)
+++|+.+|+..|++|+|+|||+||++||++||||||+.|.|+.||+.+|||+|.+|++|.+|+++|||++|+|+++++.|
T Consensus 757 ~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~ 836 (1057)
T TIGR01652 757 ADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILY 836 (1057)
T ss_pred HHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 99999999844999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred EeccC
Q 002339 930 KDFPT 934 (934)
Q Consensus 930 ~~~k~ 934 (934)
.|||+
T Consensus 837 ~~~kn 841 (1057)
T TIGR01652 837 FFYKN 841 (1057)
T ss_pred HHHHH
Confidence 99984
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-128 Score=1043.31 Aligned_cols=782 Identities=34% Similarity=0.558 Sum_probs=685.1
Q ss_pred CeEEEeCCCCCCCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc-CCCCCccccchhhHHHHH
Q 002339 36 PRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVVG 114 (934)
Q Consensus 36 ~r~~~~~~~~~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~-~~~~~~~~~~~~l~~v~~ 114 (934)
.|++.+.... ..++.+|++|.+++.||++++|+|..|++||+.+.|+|||+.++.|++| +....+.+++.|++|+++
T Consensus 63 ~rt~~~~~~~--~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~ 140 (1051)
T KOG0210|consen 63 GRTVNISFGP--HYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLT 140 (1051)
T ss_pred CceeecccCC--CcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHH
Confidence 4555555532 2357799999999999999999999999999999999999999999999 666677889999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCC
Q 002339 115 VSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (934)
Q Consensus 115 ~~~~~~~~~~~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~Lt 194 (934)
+++++++++|++|++.|+..|+.+++++.|+|.... |+++|+|||+|.++.|++||||+++|.+++.+|.|+|.|..||
T Consensus 141 itl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLD 219 (1051)
T KOG0210|consen 141 ITLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLD 219 (1051)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccC
Confidence 999999999999999999999999999988875544 9999999999999999999999999999999999999999999
Q ss_pred CCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCe--eeecCCCCeeecceEeecCCeEEEEEE
Q 002339 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRE--LYAIDPSQILLRDSKLRNTAHVYGSVI 272 (934)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~--~~~l~~~n~l~rgs~l~nt~~~~gvVv 272 (934)
|||.+|.|-|.+.++.......+.+++ +..|.|+++++.|-|++++..+ ..+|+.+|.++.++.+...+ ++|+|+
T Consensus 220 GETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t-~~gvVv 296 (1051)
T KOG0210|consen 220 GETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGT-AIGVVV 296 (1051)
T ss_pred CcccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCc-EEEEEE
Confidence 999999999999998888877777766 8899999999999999999433 57899999999999998644 999999
Q ss_pred EeccchhhhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhH
Q 002339 273 FTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (934)
Q Consensus 273 ~tG~~Tki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (934)
|||.||+-++|...++.|-.-++..+|-+.+++++++++++++....-++- ..||
T Consensus 297 YTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~------~~wy------------------- 351 (1051)
T KOG0210|consen 297 YTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG------SDWY------------------- 351 (1051)
T ss_pred EecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC------CchH-------------------
Confidence 999999999999999999999999999999999999999988776654432 3788
Q ss_pred HHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceE
Q 002339 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (934)
Q Consensus 353 ~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 432 (934)
..+++++++++++||++|-+.+++++...+..+..|.+. .+..+|++++.|+||+|.|+++|||||||+|+|.
T Consensus 352 -i~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~ 424 (1051)
T KOG0210|consen 352 -IYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEME 424 (1051)
T ss_pred -HHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccchhe
Confidence 589999999999999999999999999999999888754 5679999999999999999999999999999999
Q ss_pred EEEEEEcCeeccCCch-HHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccc
Q 002339 433 FLKCSVAGTAYGVSPS-EVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (934)
Q Consensus 433 ~~~~~i~~~~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (934)
|++++.|-..|+.+.. +.++......... ++ ..+..
T Consensus 425 ~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~-------------~~---------------------~~~~~--------- 461 (1051)
T KOG0210|consen 425 FKKIHLGTVAYSAETMDEVSQHIQSLYTPG-------------RN---------------------KGKGA--------- 461 (1051)
T ss_pred eeeeeeeeeeccHhHHHHHHHHHHHhhCCC-------------cc---------------------ccccc---------
Confidence 9999999998875432 2222211100000 00 00000
Q ss_pred cCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCc
Q 002339 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPV 591 (934)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~ 591 (934)
......+......+...++++||+++|..++ ++...|++.||||.||+++.+..|..+..|+...+.++.... .
T Consensus 462 ~~~~k~~~s~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~-----~ 535 (1051)
T KOG0210|consen 462 LSRVKKDMSARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLD-----D 535 (1051)
T ss_pred chhhcCcccHHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCC-----c
Confidence 0112234456788999999999999998765 468999999999999999999999999999999998876532 3
Q ss_pred eeEEEEeEecCCCCCCceEEEEEEcC-CCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCC
Q 002339 592 EREFKILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLD 670 (934)
Q Consensus 592 ~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~ 670 (934)
...|++|.+|||+|+.|||.+|||++ .+++..|.||||.+|......+ +++++....+|.+|+|||++|+|.++
T Consensus 536 ~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N-----dWleEE~gNMAREGLRtLVvakK~Ls 610 (1051)
T KOG0210|consen 536 ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN-----DWLEEECGNMAREGLRTLVVAKKVLS 610 (1051)
T ss_pred ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc-----hhhhhhhhhhhhhcceEEEEEecccC
Confidence 78999999999999999999999996 6899999999999997776643 47888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcHHHHHHHHHH-hhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHH
Q 002339 671 ESEYSAWNSEFQKAKSSIGADREATLEHVSD-MMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (934)
Q Consensus 671 ~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~-~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~ 749 (934)
++||+.|...|+.|+-++ .||++.+..+-+ .+|+||+++|++|+||+||++|+.+++.||.||||+||+|||+.+||+
T Consensus 611 ~~eye~Fe~~y~~A~lSi-~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ 689 (1051)
T KOG0210|consen 611 EEEYEAFEEAYNAAKLSI-SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAI 689 (1051)
T ss_pred HHHHHHHHHHHHhhhCcc-chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhhee
Confidence 999999999999999999 899999999887 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHH
Q 002339 750 NIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHF 829 (934)
Q Consensus 750 ~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~ 829 (934)
.||++.+++..+..+..+......+........ -......+++|+|++++..++ ..+++|
T Consensus 690 ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~-------------------lR~k~~~aLvi~G~Sl~~cl~-yye~Ef 749 (1051)
T KOG0210|consen 690 CIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNN-------------------LRRKTDCALVIDGESLEFCLK-YYEDEF 749 (1051)
T ss_pred eeehhccceecCceEEEEEecCCchHHHHHHHH-------------------hhcCCCcEEEEcCchHHHHHH-HHHHHH
Confidence 999999999988887777655433211110000 012346789999999998876 677889
Q ss_pred HhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccchh
Q 002339 830 LGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFLE 909 (934)
Q Consensus 830 ~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~l~ 909 (934)
.++.+.+.+++|||++|.||+++++.+|++.++.|++||||.||++||++||+|||+-|+||.||..||||.|.+|.++.
T Consensus 750 ~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~ 829 (1051)
T KOG0210|consen 750 IELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVS 829 (1051)
T ss_pred HHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHH
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred hhHhhhchhhhHHhhhheEEE
Q 002339 910 RLLVVHGHWCYKRIAQMVIIK 930 (934)
Q Consensus 910 ~lll~~Gr~~~~~i~~~i~~~ 930 (934)
+||++|||.+|+|.+++-+|.
T Consensus 830 rLLl~HGR~SYkrsa~laqfV 850 (1051)
T KOG0210|consen 830 RLLLWHGRNSYKRSAKLAQFV 850 (1051)
T ss_pred HHhhccccchHHHHHHHHHHH
Confidence 999999999999999876553
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-102 Score=948.81 Aligned_cols=646 Identities=30% Similarity=0.436 Sum_probs=530.5
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc--CCCCCccccchhhHHHHHHHHHHHHHHH
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LSPFSPVSMLLPLAIVVGVSMAKEALED 124 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~--~~~~~~~~~~~~l~~v~~~~~~~~~~~~ 124 (934)
..+|+..||.|.+...+...++ +.++.||.+++++.++++++++++. +.+.. ...+.++++++++++..++++
T Consensus 50 ~~~r~~~~G~N~~~~~~~~~~~---~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~--~~~~~I~~~i~~n~~~g~~qe 124 (917)
T COG0474 50 VKRRLKKYGPNELPEEKKRSLL---KKFLRQFKDPFIILLLVAALLSAFVGDWVDAG--VDAIVILLVVVINALLGFVQE 124 (917)
T ss_pred HHHHHhhcCCccccccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--cceeeehHHHHHHHHHHHHHH
Confidence 3467788999999977764443 8899999999999999999999874 22211 222234455666666677788
Q ss_pred HHHhhh---hhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCccee
Q 002339 125 WRRFMQ---DKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKV 201 (934)
Q Consensus 125 ~~r~k~---~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~ 201 (934)
++..++ ++.+.+.+++|+ |||++++|+|++|+|||||+|++||.||||++||++++ .+||||+|||||.|+.
T Consensus 125 ~~a~~~l~~lk~~~~~~~~V~-R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~ 199 (917)
T COG0474 125 YRAEKALEALKKMSSPKAKVL-RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVE 199 (917)
T ss_pred HHHHHHHHHHHhhccCceEEE-eCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchh
Confidence 777554 566677999999 89999999999999999999999999999999999775 5999999999999999
Q ss_pred eecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhh
Q 002339 202 KRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM 281 (934)
Q Consensus 202 K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~ 281 (934)
|.+..... .+.|. .++..|++|+||.+++.. +.|+|++||.+|+++
T Consensus 200 K~~~~~~~----------------~~~~~-----------------~~d~~n~l~sGt~V~~G~-~~giVvaTG~~T~~G 245 (917)
T COG0474 200 KQALPLTK----------------SDAPL-----------------GLDRDNMLFSGTTVVSGR-AKGIVVATGFETEFG 245 (917)
T ss_pred cccccccc----------------ccccc-----------------cCCccceEEeCCEEEcce-EEEEEEEEcCccHHH
Confidence 99875441 00110 046788999999988644 999999999999988
Q ss_pred hccCCCC---CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHH
Q 002339 282 QNATTSP---SKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358 (934)
Q Consensus 282 ~~~~~~~---~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (934)
++....+ ...+|+++.++++..+++++.++++++.++...+... . .| ...|++
T Consensus 246 ~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~-~---~~--------------------~~~~~~ 301 (917)
T COG0474 246 KIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGG-N---GL--------------------LESFLT 301 (917)
T ss_pred HHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-c---cH--------------------HHHHHH
Confidence 8776432 4679999999999999999999999988877632111 0 13 368999
Q ss_pred HHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEE
Q 002339 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSV 438 (934)
Q Consensus 359 ~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i 438 (934)
++.+++.+||++||+.+++++.+++.+| +++++++|+++++|+||++++||||||||||+|+|+|+++++
T Consensus 302 ~v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~ 371 (917)
T COG0474 302 ALALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYI 371 (917)
T ss_pred HHHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEe
Confidence 9999999999999999999999999999 889999999999999999999999999999999999999998
Q ss_pred cCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCC
Q 002339 439 AGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEP 518 (934)
Q Consensus 439 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (934)
++. +.+.+. ....
T Consensus 372 ~~~--~~~~~~-----------------------------------------------------------------~~~~ 384 (917)
T COG0474 372 NGG--GKDIDD-----------------------------------------------------------------KDLK 384 (917)
T ss_pred CCC--cccccc-----------------------------------------------------------------cccc
Confidence 741 000000 0001
Q ss_pred ChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEe
Q 002339 519 NVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598 (934)
Q Consensus 519 ~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il 598 (934)
......+++.++++||++.+..+ + .+..+||+|.||++++.+.|+.+ . ... ....|+++
T Consensus 385 ~~~~~~~~l~~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~--~~~-------------~~~~~~~~ 443 (917)
T COG0474 385 DSPALLRFLLAAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-D--LSG-------------LEVEYPIL 443 (917)
T ss_pred cchHHHHHHHHHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-C--HHH-------------Hhhhccee
Confidence 12334478999999999988755 3 56689999999999999998854 1 000 24567889
Q ss_pred EecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhc------cccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHH
Q 002339 599 NLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSK------NGRMYEEATTKLLNEYGEAGLRTLALAYKQLDES 672 (934)
Q Consensus 599 ~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~ 672 (934)
+.+||+|+|||||+|++..++++++|+|||||+|+++|+. ..++.++.+....++|+.+|||++++|||.++..
T Consensus 444 ~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~ 523 (917)
T COG0474 444 AEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRA 523 (917)
T ss_pred EEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 9999999999999999987788999999999999999985 2334678889999999999999999999977654
Q ss_pred HHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH
Q 002339 673 EYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG 752 (934)
Q Consensus 673 e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia 752 (934)
+.. . .. +.+|+||+|+|+++|+||+|++++++|+.|++|||++||+|||+.+||++||
T Consensus 524 ~~~----------------~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa 581 (917)
T COG0474 524 EKD----------------D-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIA 581 (917)
T ss_pred ccc----------------c-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHH
Confidence 311 1 11 6789999999999999999999999999999999999999999999999999
Q ss_pred HHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhh
Q 002339 753 FACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGL 832 (934)
Q Consensus 753 ~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~ 832 (934)
++||+..+... .++++|.+++...++++.+.+..
T Consensus 582 ~~~Gi~~~~~~---------------------------------------------~~vi~G~el~~l~~~el~~~~~~- 615 (917)
T COG0474 582 KECGIEAEAES---------------------------------------------ALVIDGAELDALSDEELAELVEE- 615 (917)
T ss_pred HHcCCCCCCCc---------------------------------------------eeEeehHHhhhcCHHHHHHHhhh-
Confidence 99998653210 46899999998888755554443
Q ss_pred hhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc--ccchhhHHHhCcEeecCccc-hh
Q 002339 833 AVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQAVMASDFSIAQFRF-LE 909 (934)
Q Consensus 833 ~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~~~a~~~AD~ii~~~~~-l~ 909 (934)
+. ||||++|+||.++|+.+|+ .|++|+|+|||.||+||||+|||||||+ |+|. |+++||+++.++++ ..
T Consensus 616 ---~~--VfARvsP~qK~~IV~~lq~-~g~vVamtGDGvNDapALk~ADVGIamg~~Gtda--ak~Aadivl~dd~~~~i 687 (917)
T COG0474 616 ---LS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDA--AKEAADIVLLDDNFATI 687 (917)
T ss_pred ---Cc--EEEEcCHHHHHHHHHHHHh-CCCEEEEeCCCchhHHHHHhcCccEEecccHHHH--HHhhcceEeecCcHHHH
Confidence 33 9999999999999999999 7999999999999999999999999996 5666 99999999999777 33
Q ss_pred hhHhhhchhhhHHhhhheEEEeccC
Q 002339 910 RLLVVHGHWCYKRIAQMVIIKDFPT 934 (934)
Q Consensus 910 ~lll~~Gr~~~~~i~~~i~~~~~k~ 934 (934)
..+++|||++|.|+++++.|.|+++
T Consensus 688 ~~av~eGR~~~~ni~k~i~~~l~~n 712 (917)
T COG0474 688 VLAVVEGRRVYVNIKKFILYLLSKN 712 (917)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3449999999999999999998864
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-98 Score=832.31 Aligned_cols=692 Identities=23% Similarity=0.292 Sum_probs=533.4
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHH
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~ 126 (934)
..+|++.||.|++....-..++ +.+++||.++....+|++++++|+. .+|...+.+.++++++++..++++|+
T Consensus 29 v~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfvl----~~~~e~~vI~liiv~nvtVG~~QEy~ 101 (972)
T KOG0202|consen 29 VTRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFVL----ADFDEPFVITLIIVINVTVGFVQEYN 101 (972)
T ss_pred HHHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHHH----Hhcccceeeeeeeeeeeeeeeeeehh
Confidence 3467889999999977766654 9999999999999999999999984 33334444445566777788899999
Q ss_pred Hhhhhhhhc---cceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeee
Q 002339 127 RFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (934)
Q Consensus 127 r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~ 203 (934)
..|+.++++ +..|+|+ |+|+.+.+++++|||||||.|+-||.||||++|++..+ ..||||+|||||.|+.|.
T Consensus 102 aEkalEaLk~l~p~~~~V~-R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~ 176 (972)
T KOG0202|consen 102 AEKALEALKELVPPMAHVL-RSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKD 176 (972)
T ss_pred hHHHHHHHHhcCCccceEE-ecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCccccccc
Confidence 999876665 4889999 89999999999999999999999999999999999886 899999999999999997
Q ss_pred cccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhhc
Q 002339 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQN 283 (934)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~ 283 (934)
........ +.+..+.....|+||.+..|+ +.|+|+.||.+|.++..
T Consensus 177 t~~v~~~~-------------~~~~~dk~NiaFsGT~V~~G~---------------------a~GIVi~TG~nTeiG~I 222 (972)
T KOG0202|consen 177 TDAVPKDE-------------NADVQDKKNIAFSGTLVVAGR---------------------AKGIVIGTGLNTEIGKI 222 (972)
T ss_pred CccccCCC-------------CCccccceeeEeecceeecCc---------------------eeEEEEeccccchHHHH
Confidence 65433100 000111222345666666555 99999999999976543
Q ss_pred ---cCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH-hheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHH
Q 002339 284 ---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIG-FAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTA 359 (934)
Q Consensus 284 ---~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (934)
....+..++|+|++++.+...+.-++.++|+...++ ...++.-.....|+ ...+..|..+
T Consensus 223 ~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~f----------------k~~~~~f~Ia 286 (972)
T KOG0202|consen 223 FKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWF----------------KGALYYFKIA 286 (972)
T ss_pred HHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccch----------------hchhhhhhHH
Confidence 335566689999999999999985555555544443 22111000001222 3446788889
Q ss_pred HHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEc
Q 002339 360 LILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVA 439 (934)
Q Consensus 360 l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~ 439 (934)
+.+.+.+||.+||+.+++...++..+| ++++++||++..+|+||.+++||+|||||||+|+|.+.++++.
T Consensus 287 VsLAVAAIPEGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~ 356 (972)
T KOG0202|consen 287 VSLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIP 356 (972)
T ss_pred HHHHHHhccCCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEec
Confidence 999999999999999999999999999 8999999999999999999999999999999999999999987
Q ss_pred CeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCcccccccccc--CCCCC
Q 002339 440 GTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDG--NWLKE 517 (934)
Q Consensus 440 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 517 (934)
+..++.. ++ + ...-.+++..+....+. .....
T Consensus 357 ~~~~~~~-~~-------------------------------f--------------~~tg~ty~~~g~v~~~~~~~~~~~ 390 (972)
T KOG0202|consen 357 DGGTATV-DE-------------------------------F--------------NPTGTTYSPEGEVFKDGLYEKDKA 390 (972)
T ss_pred ccccccc-cc-------------------------------c--------------ccCCceeCCCCceEecCccccccc
Confidence 6654332 00 0 00000011111111111 11123
Q ss_pred CChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEE
Q 002339 518 PNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597 (934)
Q Consensus 518 ~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 597 (934)
...+.+.++..+.++||.+...+++. +.++ ..|.|.|.||..+|+++|+.-......+ . .+ ...+.+.....++.
T Consensus 391 ~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~-~~G~pTE~AL~vlaeKm~l~~~~~~~~s-~-~~-~~~c~~~~~~~~~~ 465 (972)
T KOG0202|consen 391 GDNDLLQELAEICALCNDATVEYNDA-DCYE-KVGEPTEGALIVLAEKMGLPGTRSTNLS-N-EE-ASACNRVYSRLFKK 465 (972)
T ss_pred cccHHHHHHHHHHHhhhhhhhhcCch-hhHH-hcCCchHHHHHHHHHHcCCCcchhhccc-c-cc-cccchhHHHHhhhh
Confidence 35567889999999999998887664 2222 2489999999999999998754411110 0 01 12233333456778
Q ss_pred eEecCCCCCCceEEEEEEcCCCc--EEEEEcccchhhhHhhhc-----------cccccHHHHHHHHHHHHhcCCeEEEE
Q 002339 598 LNLLDFTSKRKRMSVIVRDEDGQ--ILLLCKGADSIIFDRLSK-----------NGRMYEEATTKLLNEYGEAGLRTLAL 664 (934)
Q Consensus 598 l~~~~F~s~rkrmsviv~~~~~~--~~l~~KGa~~~i~~~~~~-----------~~~~~~~~~~~~~~~~~~~Glr~l~~ 664 (934)
...+||+|+||+|||.+.++.+. +.+|+|||+|.|+++|+. -.+..++.+.+...+|+.+|||+|++
T Consensus 466 ~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLal 545 (972)
T KOG0202|consen 466 IAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLAL 545 (972)
T ss_pred eeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEE
Confidence 89999999999999999986654 899999999999999954 12236788899999999999999999
Q ss_pred EEEeCCH-H--HHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEc
Q 002339 665 AYKQLDE-S--EYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLT 741 (934)
Q Consensus 665 A~k~l~~-~--e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlT 741 (934)
|+++.+. . +.+.|.. .+ +...|+||+|+|++|+.||+|++++++|+.|+++||+|.|+|
T Consensus 546 A~~~~~~~~~~~~~l~~~----------s~--------~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mIT 607 (972)
T KOG0202|consen 546 ASKDSPGQVPDDQDLNDT----------SN--------RATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMIT 607 (972)
T ss_pred EccCCcccChhhhhhccc----------cc--------ccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEc
Confidence 9998764 1 1111110 12 257899999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhh
Q 002339 742 GDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (934)
Q Consensus 742 GD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~ 821 (934)
||+.+||.+||+++|+...+.++ ....++|.+++...
T Consensus 608 GD~~~TA~AI~r~iGi~~~~ed~-------------------------------------------~~~~~TG~efD~ls 644 (972)
T KOG0202|consen 608 GDNKETAEAIAREIGIFSEDEDV-------------------------------------------SSMALTGSEFDDLS 644 (972)
T ss_pred CCCHHHHHHHHHHhCCCcCCccc-------------------------------------------cccccchhhhhcCC
Confidence 99999999999999998654321 12367888888776
Q ss_pred hHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc--ccchhhHHHhCc
Q 002339 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQAVMASD 899 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~~~a~~~AD 899 (934)
.+++..... +..+|+|++|.+|.++|+.||+ .|++|+|.|||.||+|+|+.|||||||+ |++. ||+|||
T Consensus 645 ~~~~~~~~~------~~~vFaR~~P~HK~kIVeaLq~-~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV--aKeAsD 715 (972)
T KOG0202|consen 645 DEELDDAVR------RVLVFARAEPQHKLKIVEALQS-RGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV--AKEASD 715 (972)
T ss_pred HHHHHHHhh------cceEEEecCchhHHHHHHHHHh-cCCEEEecCCCccchhhhhhcccceeecCCccHh--hHhhhh
Confidence 665554333 3459999999999999999998 8999999999999999999999999994 8888 999999
Q ss_pred EeecCccc--hhhhHhhhchhhhHHhhhheEEEec
Q 002339 900 FSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDF 932 (934)
Q Consensus 900 ~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~ 932 (934)
+||.+++| +..+ +.+||.+|.|++++|.|.+.
T Consensus 716 MVL~DDnFstIvaA-VEEGr~IynNik~Fir~~lS 749 (972)
T KOG0202|consen 716 MVLADDNFSTIVAA-VEEGRAIYNNIKNFIRYLLS 749 (972)
T ss_pred cEEecCcHHHHHHH-HHHhHHHHHHHHHHHHHHHh
Confidence 99999888 6666 89999999999999999764
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-95 Score=895.04 Aligned_cols=720 Identities=20% Similarity=0.222 Sum_probs=520.2
Q ss_pred CCCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHH
Q 002339 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (934)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~ 125 (934)
+..+|+++||+|.++.++...++ +.+++||.+|+.++++++++++++. ..|.. .+.++++++++++..+++++
T Consensus 31 ea~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~~---~~~~~-~~iIl~vv~in~~i~~~QE~ 103 (1053)
T TIGR01523 31 EAQHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFAM---HDWIE-GGVISAIIALNILIGFIQEY 103 (1053)
T ss_pred HHHHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHH---hhHHH-HHHHHhHHHHHHHHHHHHHH
Confidence 34568899999999988765543 8899999999999999999999984 34444 44466778889999999999
Q ss_pred HHhhhhhhhc---cceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceee
Q 002339 126 RRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVK 202 (934)
Q Consensus 126 ~r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K 202 (934)
+..++...+. ..+++|+ |||++++|++++|+|||||.|++|+.||||++|+++++ +.||||+|||||.|+.|
T Consensus 104 ~aekal~aL~~l~~~~~~Vi-Rdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K 178 (1053)
T TIGR01523 104 KAEKTMDSLKNLASPMAHVI-RNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIK 178 (1053)
T ss_pred HHHHHHHHHhccCCCceEEE-eCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceec
Confidence 9999865554 5789999 89999999999999999999999999999999999665 99999999999999999
Q ss_pred ecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhh
Q 002339 203 RAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ 282 (934)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~ 282 (934)
.+...... .. +....+.....|+||.+..|+ +.|+|++||.+|.+++
T Consensus 179 ~~~~~~~~-~~-----------~~~~~d~~n~lf~GT~V~~G~---------------------g~~vVvatG~~T~~Gk 225 (1053)
T TIGR01523 179 DAHATFGK-EE-----------DTPIGDRINLAFSSSAVTKGR---------------------AKGICIATALNSEIGA 225 (1053)
T ss_pred cccccccc-cc-----------cCCcccCCCccccCceEEeee---------------------EEEEEEEecCccHHHH
Confidence 86421100 00 000001112235555555555 9999999999997765
Q ss_pred ccCC---CC-----------------------------------CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheee
Q 002339 283 NATT---SP-----------------------------------SKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKI 324 (934)
Q Consensus 283 ~~~~---~~-----------------------------------~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~ 324 (934)
.... .. ..+||+|+++++++.+++++.++++++.+++..+
T Consensus 226 Ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~-- 303 (1053)
T TIGR01523 226 IAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF-- 303 (1053)
T ss_pred HHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 4431 10 0149999999999999988888888776654221
Q ss_pred cccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeee
Q 002339 325 NYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQAR 404 (934)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk 404 (934)
. .| ...+++++.+++.++|++||+.++++..+++.+| ++++++||
T Consensus 304 ~-----~~--------------------~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM----------ak~~~lVr 348 (1053)
T TIGR01523 304 D-----VD--------------------KEVAIYAICLAISIIPESLIAVLSITMAMGAANM----------SKRNVIVR 348 (1053)
T ss_pred h-----hh--------------------HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----------HhcCCEec
Confidence 0 01 1356678899999999999999999999999999 88999999
Q ss_pred cCccccccccceEEEecCCCceeecceEEEEEEEcCe-eccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchh
Q 002339 405 TSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGT-AYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIEL 483 (934)
Q Consensus 405 ~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (934)
+++++|+||++++||+|||||||+|+|+|+++++.+. .|....... +...+..+ -.....
T Consensus 349 ~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~--------~~~~~~g~-----------~~~~~~ 409 (1053)
T TIGR01523 349 KLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDD--------AFNPNEGN-----------VSGIPR 409 (1053)
T ss_pred cchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCC--------CCCCcccc-----------cccccc
Confidence 9999999999999999999999999999999998652 221100000 00000000 000000
Q ss_pred hhhcccCCCCCcccccCCCccccccccccCC-CCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHH
Q 002339 484 ETVITSNDGNDFKRRIKGFNFEDSRLMDGNW-LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVA 562 (934)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~ 562 (934)
.. ...........+.+........+... ..........+++.+.++||++....++..+.. ...++|+|.||+.+
T Consensus 410 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~-~~~GdptE~ALl~~ 485 (1053)
T TIGR01523 410 FS---PYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCW-KAHGDPTEIAIHVF 485 (1053)
T ss_pred cc---cccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCce-eeCcCccHHHHHHH
Confidence 00 00000000000000000000000000 000012346678899999999876543222221 13589999999999
Q ss_pred HHHCCcEEEeec---------C-CeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCC-cEEEEEcccchh
Q 002339 563 AREFGFEFYRRT---------Q-SSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDG-QILLLCKGADSI 631 (934)
Q Consensus 563 a~~~g~~~~~~~---------~-~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~l~~KGa~~~ 631 (934)
|.+.|+...... . ....+.... .++....|++++.+||||+|||||++++++++ .+++|+|||||.
T Consensus 486 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~ 562 (1053)
T TIGR01523 486 AKKFDLPHNALTGEEDLLKSNENDQSSLSQHN---EKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFER 562 (1053)
T ss_pred HHHcCCCcccccchhhhhhhcccccccccccc---ccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHH
Confidence 999997531100 0 000000000 00013568999999999999999999997654 589999999999
Q ss_pred hhHhhhcc-----------ccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHH
Q 002339 632 IFDRLSKN-----------GRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVS 700 (934)
Q Consensus 632 i~~~~~~~-----------~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~ 700 (934)
|+++|+.. +++.++.+.+.+++|+.+|+|||++|||.++.+++..+ .+.. .. .+|
T Consensus 563 il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~-~~~-------- 628 (1053)
T TIGR01523 563 IIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ET-LNR-------- 628 (1053)
T ss_pred HHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cc-cch--------
Confidence 99999742 12245678888999999999999999999987554221 1100 00 012
Q ss_pred HhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHH
Q 002339 701 DMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAK 780 (934)
Q Consensus 701 ~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~ 780 (934)
+.+|+||+|+|+++++||+|++++++|+.|+++||+|||+|||+..||.++|++|||++.+.. ... .
T Consensus 629 ~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~--~~~-~---------- 695 (1053)
T TIGR01523 629 ATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI--HDR-D---------- 695 (1053)
T ss_pred hhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc--ccc-c----------
Confidence 357899999999999999999999999999999999999999999999999999999864311 000 0
Q ss_pred HHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcC
Q 002339 781 EAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT 860 (934)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~ 860 (934)
......+++|.+++.+.++++.+... ...||||++|+||.++|+.+|+ .
T Consensus 696 ------------------------~~~~~~vitG~~l~~l~~~~l~~~~~------~~~V~ar~sP~~K~~iV~~lq~-~ 744 (1053)
T TIGR01523 696 ------------------------EIMDSMVMTGSQFDALSDEEVDDLKA------LCLVIARCAPQTKVKMIEALHR-R 744 (1053)
T ss_pred ------------------------ccccceeeehHHhhhcCHHHHHHHhh------cCeEEEecCHHHHHHHHHHHHh-c
Confidence 00113689999998776655543322 3459999999999999999998 7
Q ss_pred CCEEEEEcCChhhHHHHHHcCccEEEc--ccchhhHHHhCcEeecC--ccchhhhHhhhchhhhHHhhhheEEEeccC
Q 002339 861 GKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQAVMASDFSIAQ--FRFLERLLVVHGHWCYKRIAQMVIIKDFPT 934 (934)
Q Consensus 861 ~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~~~a~~~AD~ii~~--~~~l~~lll~~Gr~~~~~i~~~i~~~~~k~ 934 (934)
|++|+|+|||.||++||+.|||||||+ |++. |+++||++|.+ |+.+.++ +.|||++|+|+++++.|.|+++
T Consensus 745 g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~~n 819 (1053)
T TIGR01523 745 KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASILNA-IEEGRRMFDNIMKFVLHLLAEN 819 (1053)
T ss_pred CCeeEEeCCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999994 6777 99999999998 5558888 8999999999999999998764
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-94 Score=893.27 Aligned_cols=682 Identities=20% Similarity=0.253 Sum_probs=528.8
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc--CC-------CCCccccchhhHHHHHHHH
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LS-------PFSPVSMLLPLAIVVGVSM 117 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~--~~-------~~~~~~~~~~l~~v~~~~~ 117 (934)
..+|+.+||+|.++.++.+.++ +.|++||.+|+++.++++++++++. +. ....+...+++++++++++
T Consensus 42 ~~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 118 (997)
T TIGR01106 42 AAEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITG 118 (997)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHH
Confidence 4567889999999987766554 8899999999999999999997653 10 0122334456778888999
Q ss_pred HHHHHHHHHHhhhhhhhcc---ceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCC
Q 002339 118 AKEALEDWRRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (934)
Q Consensus 118 ~~~~~~~~~r~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~Lt 194 (934)
+..+++++++++.++.+++ .+++|+ |||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+||
T Consensus 119 ~i~~~qe~ka~~~l~~l~~~~~~~~~Vi-Rdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LT 193 (997)
T TIGR01106 119 CFSYYQEAKSSKIMESFKNMVPQQALVI-RDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLT 193 (997)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEE-ECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccC
Confidence 9999999999999887765 689999 89999999999999999999999999999999999543 899999999
Q ss_pred CCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEe
Q 002339 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFT 274 (934)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~t 274 (934)
|||.|+.|.+.... ..|++.+|++++||.+.. |++.|+|++|
T Consensus 194 GES~pv~K~~~~~~-------------------------------------~~~~~~~n~l~~Gt~v~~-G~~~~~V~~t 235 (997)
T TIGR01106 194 GESEPQTRSPEFTH-------------------------------------ENPLETRNIAFFSTNCVE-GTARGIVVNT 235 (997)
T ss_pred CCCCceeccCCCcc-------------------------------------cCccccCCeEEeccEeee-eeEEEEEEEc
Confidence 99999999875321 113455666666666653 5699999999
Q ss_pred ccchhhhhccC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchh
Q 002339 275 GHDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVP 351 (934)
Q Consensus 275 G~~Tki~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (934)
|.+|+++++.. ..+.+++|+++.++++...+.++.++++++.++++.+... .|
T Consensus 236 G~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------------------- 291 (997)
T TIGR01106 236 GDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY-----TW------------------- 291 (997)
T ss_pred cccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CH-------------------
Confidence 99998877665 5566789999999999999988888777766665432210 12
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecce
Q 002339 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQM 431 (934)
Q Consensus 352 ~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m 431 (934)
...+.+++.+++.+||++|+++++++...++.+| +++++++|+++.+|+||++++||||||||||+|+|
T Consensus 292 -~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m 360 (997)
T TIGR01106 292 -LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRM 360 (997)
T ss_pred -HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCceecCce
Confidence 2456677888888999999999999999999998 78899999999999999999999999999999999
Q ss_pred EEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccc
Q 002339 432 DFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (934)
Q Consensus 432 ~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (934)
+|.++++++..|..+.... ..+.
T Consensus 361 ~v~~~~~~~~~~~~~~~~~------------------------------------------------~~~~--------- 383 (997)
T TIGR01106 361 TVAHMWFDNQIHEADTTED------------------------------------------------QSGV--------- 383 (997)
T ss_pred EEEEEEECCeEEecCCccC------------------------------------------------CCCc---------
Confidence 9999998877654221000 0000
Q ss_pred cCCCCCCChhHHHHHHHHHhhcceeeecccCCCC--ceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCC
Q 002339 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEETG--NLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (934)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~--~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~ 589 (934)
...........++.++++||++....+.... .-.+..++|+|.||++++...+.....
T Consensus 384 ---~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~----------------- 443 (997)
T TIGR01106 384 ---SFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME----------------- 443 (997)
T ss_pred ---cCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH-----------------
Confidence 0001123445788899999988765332110 012446899999999999865432110
Q ss_pred CceeEEEEeEecCCCCCCceEEEEEEcC---CCcEEEEEcccchhhhHhhhc---cc------cccHHHHHHHHHHHHhc
Q 002339 590 PVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSK---NG------RMYEEATTKLLNEYGEA 657 (934)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~---~~------~~~~~~~~~~~~~~~~~ 657 (934)
....|+.++.+||+|+||||+++++.. ++.+++|+|||||.|+++|+. ++ ++.++.+.+.+++|+.+
T Consensus 444 -~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~ 522 (997)
T TIGR01106 444 -MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGL 522 (997)
T ss_pred -HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhc
Confidence 135678899999999999999988642 256899999999999999974 11 23456688889999999
Q ss_pred CCeEEEEEEEeCCHHHHHH-HHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCe
Q 002339 658 GLRTLALAYKQLDESEYSA-WNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLK 736 (934)
Q Consensus 658 Glr~l~~A~k~l~~~e~~~-~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIk 736 (934)
|+||+++|||.++.++++. |.. +++ ..+.+|+||+|+|+++++||+|++++++|++|+++||+
T Consensus 523 GlRvla~A~k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~ 586 (997)
T TIGR01106 523 GERVLGFCHLYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIK 586 (997)
T ss_pred CCEEEEEEEeecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCe
Confidence 9999999999998655432 211 110 01344899999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChh
Q 002339 737 IWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKT 816 (934)
Q Consensus 737 v~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~ 816 (934)
++|+|||++.||.++|+++|+++++... .++ +...+...... ........++++|.+
T Consensus 587 v~~~TGd~~~ta~~ia~~~gi~~~~~~~-------~~~------------i~~~~~~~~~~----~~~~~~~~~vi~G~~ 643 (997)
T TIGR01106 587 VIMVTGDHPITAKAIAKGVGIISEGNET-------VED------------IAARLNIPVSQ----VNPRDAKACVVHGSD 643 (997)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCCccc-------hhh------------hhhhccccccc----cccccccceEEEhHH
Confidence 9999999999999999999998754321 000 00000000000 001112247999999
Q ss_pred hhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc--ccchhhH
Q 002339 817 LAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQA 894 (934)
Q Consensus 817 l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~~~a 894 (934)
++.+.++++.+ ....+..+||||++|+||.++|+.+|+ .|++|+|+|||.||++||+.|||||||+ |+|. |
T Consensus 644 l~~l~~~el~~----~~~~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v--a 716 (997)
T TIGR01106 644 LKDMTSEQLDE----ILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--S 716 (997)
T ss_pred hhhCCHHHHHH----HHHhcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHhhCCcceecCCcccHH--H
Confidence 98877655443 334445679999999999999999998 8999999999999999999999999995 6788 9
Q ss_pred HHhCcEeecCccc--hhhhHhhhchhhhHHhhhheEEEeccC
Q 002339 895 VMASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDFPT 934 (934)
Q Consensus 895 ~~~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~k~ 934 (934)
+++||++|.++++ +.++ +.|||++|.|+++++.|.|+++
T Consensus 717 k~aADivL~dd~f~~Iv~a-i~~GR~i~~ni~k~i~~~l~~n 757 (997)
T TIGR01106 717 KQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSN 757 (997)
T ss_pred HHhhceEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999555 8888 9999999999999999998763
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-94 Score=800.34 Aligned_cols=654 Identities=22% Similarity=0.308 Sum_probs=518.7
Q ss_pred CcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc-----CCCCCccccchhhH---HHHHHHHHH
Q 002339 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-----LSPFSPVSMLLPLA---IVVGVSMAK 119 (934)
Q Consensus 48 ~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~-----~~~~~~~~~~~~l~---~v~~~~~~~ 119 (934)
..|+.-||+|.++..+...|+ .++|+.|+...-+++.+++++++.. ....+|+....+++ ++++++++.
T Consensus 126 ~~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~n 202 (1034)
T KOG0204|consen 126 ERRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVN 202 (1034)
T ss_pred HHHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecc
Confidence 467889999999999887654 7899999999999999999999864 22446776544333 334445554
Q ss_pred HHHHHHHHhhhhhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcc
Q 002339 120 EALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNL 199 (934)
Q Consensus 120 ~~~~~~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~ 199 (934)
++-++.+-.+.++...+.++.|+ |||+.++|+..||+||||+.|+.||.+||||+++++++ +.||||+|||||++
T Consensus 203 Dy~qe~QF~~L~~~k~~~k~~Vi-R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd~ 277 (1034)
T KOG0204|consen 203 DYRQELQFRKLQKEKRNIKFQVI-RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESDH 277 (1034)
T ss_pred hhHHhhhhhhhhhhhhceEEEEE-ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCcc
Confidence 54444444444555567889999 89999999999999999999999999999999999765 99999999999999
Q ss_pred eeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchh
Q 002339 200 KVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSK 279 (934)
Q Consensus 200 ~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk 279 (934)
+.|.+... .+.++||.+++|. +.++|+.+|.+|.
T Consensus 278 v~k~~~~d-------------------------PfLlSGTkv~eGs---------------------gkMlVTaVGmnt~ 311 (1034)
T KOG0204|consen 278 VQKSLDKD-------------------------PFLLSGTKVMEGS---------------------GKMLVTAVGMNTQ 311 (1034)
T ss_pred eeccCCCC-------------------------CeEeecceeecCc---------------------ceEEEEEeeecch
Confidence 99976432 3678999999888 9999999999996
Q ss_pred h---hhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccc--cC-CCCCchhHH
Q 002339 280 V---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVY--FN-PGKPLVPGL 353 (934)
Q Consensus 280 i---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~ 353 (934)
. |.........+||+|-++++++..+..+.++++++++++..+..- ......+.. .. .......++
T Consensus 312 wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~--------~~~~~~~~~~~~~~~~~~~~~~v 383 (1034)
T KOG0204|consen 312 WGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFF--------IGKTKIEGGTGTTWSDEYIQEFV 383 (1034)
T ss_pred HhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------heeeecCCCCCccccHHHHHHHH
Confidence 5 444455565789999999999999988888888777666544211 000000000 00 011123344
Q ss_pred HHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEE
Q 002339 354 AHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDF 433 (934)
Q Consensus 354 ~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~ 433 (934)
..|..++.+++.++|.+||+++++...++..+| .+.+.++|.++++|++|..+.||+|||||||.|.|++
T Consensus 384 ~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkM----------mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtV 453 (1034)
T KOG0204|consen 384 KFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKM----------MKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTV 453 (1034)
T ss_pred HHhhheeEEEEEECCCCccHHHHHHHHHHHHHH----------hcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEE
Confidence 566667778999999999999999999999998 4556789999999999999999999999999999999
Q ss_pred EEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccC
Q 002339 434 LKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGN 513 (934)
Q Consensus 434 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (934)
.+.++++..|..+... .
T Consensus 454 V~~~~~~~~~k~~~~~-~-------------------------------------------------------------- 470 (1034)
T KOG0204|consen 454 VQSYIGSEHYKVNSPK-S-------------------------------------------------------------- 470 (1034)
T ss_pred EeeeeccccccccCcc-c--------------------------------------------------------------
Confidence 9999988876532211 0
Q ss_pred CCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCcee
Q 002339 514 WLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593 (934)
Q Consensus 514 ~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~ 593 (934)
..-.+.....++.+++...+.....++..+...-+.+||.|.||+.++..+|..+.. .+.
T Consensus 471 --~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~------------------~R~ 530 (1034)
T KOG0204|consen 471 --SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD------------------VRP 530 (1034)
T ss_pred --ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh------------------hcc
Confidence 001112233455556555544444444444445567999999999999999987755 246
Q ss_pred EEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhcc----------ccccHHHHHHHHHHHHhcCCeEEE
Q 002339 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN----------GRMYEEATTKLLNEYGEAGLRTLA 663 (934)
Q Consensus 594 ~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~~~~~~~~Glr~l~ 663 (934)
..++++++||+|.||||+++++.+++..++|+|||.|.|+..|+.- ++.....+++.++.||.+||||+|
T Consensus 531 e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~ 610 (1034)
T KOG0204|consen 531 EEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTIC 610 (1034)
T ss_pred hhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheee
Confidence 6788999999999999999999888773499999999999999861 123455788999999999999999
Q ss_pred EEEEeCCHH--HHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEc
Q 002339 664 LAYKQLDES--EYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLT 741 (934)
Q Consensus 664 ~A~k~l~~~--e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlT 741 (934)
+|||+.... +..+|.. .+..+.+|+++|++||+||+||||+++|+.|+.|||+|.|+|
T Consensus 611 lAy~df~~~~~~~~~~~~--------------------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVT 670 (1034)
T KOG0204|consen 611 LAYRDFVAGPDEEPSWDN--------------------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVT 670 (1034)
T ss_pred EEeeccccCCCCCCCccc--------------------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEe
Confidence 999995433 1122211 134568999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhh
Q 002339 742 GDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (934)
Q Consensus 742 GD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~ 821 (934)
||+..||++||.+|||++++... +++.|+++..+-
T Consensus 671 GDNI~TAkAIA~eCGILt~~~d~---------------------------------------------~~lEG~eFr~~s 705 (1034)
T KOG0204|consen 671 GDNINTAKAIARECGILTPGGDF---------------------------------------------LALEGKEFRELS 705 (1034)
T ss_pred CCcHHHHHHHHHHcccccCCCcc---------------------------------------------ceecchhhhhcC
Confidence 99999999999999999876542 366777777666
Q ss_pred hHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEE--cccchhhHHHhCc
Q 002339 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI--SGVEGMQAVMASD 899 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam--~~~e~~~a~~~AD 899 (934)
+++..+...++. |.||.+|.+|..+|+.+++ .|++|++.|||.||.|+|++||||.|| +|+|. ||++||
T Consensus 706 ~ee~~~i~pkl~------VlARSSP~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSD 776 (1034)
T KOG0204|consen 706 QEERDKIWPKLR------VLARSSPNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASD 776 (1034)
T ss_pred HHHHHhhhhhhe------eeecCCCchHHHHHHHHHh-cCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCC
Confidence 666666555554 9999999999999999998 899999999999999999999999988 58998 999999
Q ss_pred EeecCccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 900 FSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 900 ~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
+||++++| +.+. +.|||..|.+|+|+++|.+
T Consensus 777 IIi~DDNFssIVk~-v~WGR~VY~nIqKFiQFQL 809 (1034)
T KOG0204|consen 777 IIILDDNFSSIVKA-VKWGRNVYDNIQKFLQFQL 809 (1034)
T ss_pred eEEEcCchHHHHHH-HHhhhHHHHHHHHhheeEE
Confidence 99999888 7888 8999999999999999986
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-93 Score=880.87 Aligned_cols=648 Identities=22% Similarity=0.296 Sum_probs=497.8
Q ss_pred CCCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccC--CC--------CCccccch---hhHHH
Q 002339 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPL--SP--------FSPVSMLL---PLAIV 112 (934)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~--~~--------~~~~~~~~---~l~~v 112 (934)
+..+|+++||+|.++.++...++ +.+++||+++++++|+++++++++.. .+ ..|+..++ +++++
T Consensus 65 ev~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~ 141 (941)
T TIGR01517 65 TLERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILV 141 (941)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHH
Confidence 34568889999999999886554 78999999999999999999998731 11 13444433 23333
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeec
Q 002339 113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN 192 (934)
Q Consensus 113 ~~~~~~~~~~~~~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~ 192 (934)
++++++.++.++...++.++..++.+++|+ |||++++|++++|+|||||.|++||.|||||+|++++ .+.||||+
T Consensus 142 ~~i~~~~e~~~~~~~~~l~~~~~~~~~~Vi-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~ 216 (941)
T TIGR01517 142 VLVTAVNDYKKELQFRQLNREKSAQKIAVI-RGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESS 216 (941)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCCCceEEE-ECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEecc
Confidence 444555555555555554444556789999 8999999999999999999999999999999999932 59999999
Q ss_pred CCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEE
Q 002339 193 LDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (934)
Q Consensus 193 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv 272 (934)
|||||.|+.|.+++.. ..|+||.+.+|. +.|+|+
T Consensus 217 LTGES~pv~K~~~~~n-------------------------~v~~GT~v~~G~---------------------~~~iV~ 250 (941)
T TIGR01517 217 ITGESDPIKKGAPKDS-------------------------FLLSGTVVNEGS---------------------GRMLVT 250 (941)
T ss_pred cCCCCCcccccCCCCc-------------------------eEEeCCeEEeeE---------------------EEEEEE
Confidence 9999999999865321 347777777766 999999
Q ss_pred Eeccchhhhh---ccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCc
Q 002339 273 FTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPL 349 (934)
Q Consensus 273 ~tG~~Tki~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (934)
+||.+|.+++ +....+ +++|+++.++++...+..+.++++++.++++.+..... ..|. +.. .+....
T Consensus 251 ~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~--~~~~---~~~----~~~~~~ 320 (941)
T TIGR01517 251 AVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFR--IIRG---DGR----DTEEDA 320 (941)
T ss_pred EeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hccc---ccc----ccchhh
Confidence 9999995544 444444 46799999999999998887777776665543210000 0000 000 000001
Q ss_pred hhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeec
Q 002339 350 VPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCN 429 (934)
Q Consensus 350 ~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n 429 (934)
..+...+.+++.+++.+||++|+++++++...++.++ +++++++|+++.+|+||++++||||||||||+|
T Consensus 321 ~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n 390 (941)
T TIGR01517 321 QTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDKTGTLTQN 390 (941)
T ss_pred HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcCcCceeec
Confidence 2334578889999999999999999999999999888 889999999999999999999999999999999
Q ss_pred ceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccc
Q 002339 430 QMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRL 509 (934)
Q Consensus 430 ~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (934)
+|.+.+++..+..|..+..
T Consensus 391 ~m~v~~~~~~~~~~~~~~~------------------------------------------------------------- 409 (941)
T TIGR01517 391 VMSVVQGYIGEQRFNVRDV------------------------------------------------------------- 409 (941)
T ss_pred eEEEEEEEEecceEecCcc-------------------------------------------------------------
Confidence 9999999876543321100
Q ss_pred cccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCC
Q 002339 510 MDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (934)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~ 589 (934)
.. .......+++...+.||+..+...++ ....+..++|+|.||++++++.|.....
T Consensus 410 ~~------~~~~~~~~~l~~~~~~~s~~~~~~~~-~~~~~~~g~p~e~All~~~~~~~~~~~~----------------- 465 (941)
T TIGR01517 410 LR------NVPKHVRNILVEGISLNSSSEEVVDR-GGKRAFIGSKTECALLGFLLLLGRDYQE----------------- 465 (941)
T ss_pred cc------cCCHHHHHHHHHHHHhCCCCccccCC-CCccccCCCccHHHHHHHHHHcCCCHHH-----------------
Confidence 00 00112334455445555543322111 1112456899999999999887643211
Q ss_pred CceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhcc----cc-----ccHHHHHHHHHHHHhcCCe
Q 002339 590 PVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN----GR-----MYEEATTKLLNEYGEAGLR 660 (934)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----~~-----~~~~~~~~~~~~~~~~Glr 660 (934)
....+++++.+||+|+||||+++++.+++++++|+|||||.|+++|+.. +. +..+.+.+.+++++.+|+|
T Consensus 466 -~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~R 544 (941)
T TIGR01517 466 -VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALR 544 (941)
T ss_pred -HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCE
Confidence 1235678889999999999999999877889999999999999999751 11 1345678889999999999
Q ss_pred EEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEE
Q 002339 661 TLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740 (934)
Q Consensus 661 ~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ml 740 (934)
|+++|||.++.+++..| +..|+||+|+|+++++|++|++++++|+.|+++||++||+
T Consensus 545 vl~~A~~~~~~~~~~~~-----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~mi 601 (941)
T TIGR01517 545 TICLAYRDFAPEEFPRK-----------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMV 601 (941)
T ss_pred EEEEEEEecCccccccc-----------------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEE
Confidence 99999999876543221 2347899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHh
Q 002339 741 TGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYA 820 (934)
Q Consensus 741 TGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~ 820 (934)
|||+..||.++|++|||.+++. .+++|+++...
T Consensus 602 TGD~~~tA~~iA~~~GI~~~~~-----------------------------------------------~vi~G~~~~~l 634 (941)
T TIGR01517 602 TGDNIDTAKAIARNCGILTFGG-----------------------------------------------LAMEGKEFRRL 634 (941)
T ss_pred CCCChHHHHHHHHHcCCCCCCc-----------------------------------------------eEeeHHHhhhC
Confidence 9999999999999999986432 25677777665
Q ss_pred hhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc--ccchhhHHHhC
Q 002339 821 LEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQAVMAS 898 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~~~a~~~A 898 (934)
.++++...+. +..+|||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ |++. |+++|
T Consensus 635 ~~~el~~~i~------~~~Vfar~sPe~K~~iV~~lq~-~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aA 705 (941)
T TIGR01517 635 VYEEMDPILP------KLRVLARSSPLDKQLLVLMLKD-MGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV--AKEAS 705 (941)
T ss_pred CHHHHHHHhc------cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCCchHHHHHhCCcceecCCCccHH--HHHhC
Confidence 5555444332 3459999999999999999998 8999999999999999999999999995 6777 99999
Q ss_pred cEeecCccc--hhhhHhhhchhhhHHhhhheEEEecc
Q 002339 899 DFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDFP 933 (934)
Q Consensus 899 D~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~k 933 (934)
|++|+++++ +.++ +.|||++|.|+++++.|.|++
T Consensus 706 DivL~dd~f~~I~~~-i~~gR~~~~ni~k~i~~~l~~ 741 (941)
T TIGR01517 706 DIILLDDNFASIVRA-VKWGRNVYDNIRKFLQFQLTV 741 (941)
T ss_pred CEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 999996555 8888 799999999999999998764
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-92 Score=868.27 Aligned_cols=675 Identities=23% Similarity=0.264 Sum_probs=509.8
Q ss_pred HHHHHhhHHHHHHHHHHHHhccc-CCC------CCccccchhhHHHHHHHHHHHHHHHHHHhhhhhhhc---cceEEEEe
Q 002339 74 LFEQFNRVANIYFLIAALLSVTP-LSP------FSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVN---ARKVSVHV 143 (934)
Q Consensus 74 l~~qf~~~~~~~~l~~~il~~~~-~~~------~~~~~~~~~l~~v~~~~~~~~~~~~~~r~k~~~~~n---~~~~~V~~ 143 (934)
+++||++|++++++++++++++. ..+ ..|+..++ ++++++++++...+++++..++.+.+. +.+++|+
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~-Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~Vi- 78 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFV-ILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVL- 78 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE-
Confidence 47899999999999999999985 221 24444444 446677788889999999988766554 5789999
Q ss_pred CCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceE
Q 002339 144 GNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGT 223 (934)
Q Consensus 144 r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~ 223 (934)
|||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.|.+.....
T Consensus 79 Rdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~-------------- 140 (917)
T TIGR01116 79 RDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPD-------------- 140 (917)
T ss_pred ECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCc--------------
Confidence 89999999999999999999999999999999999553 999999999999999998753210
Q ss_pred EEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhh---ccCCCCCccchHHHHHHH
Q 002339 224 VKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDK 300 (934)
Q Consensus 224 i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~~~~~ 300 (934)
....+.+.+|++++||.+.+ |++.|+|++||.+|++++ +....+.+++|+|+++++
T Consensus 141 --------------------~~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~ 199 (917)
T TIGR01116 141 --------------------ERAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDE 199 (917)
T ss_pred --------------------cccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHH
Confidence 00113455677888888775 679999999999998876 555677788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhee-ecccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHH
Q 002339 301 IIFILFAILVLISLISSIGFAVK-INYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVK 379 (934)
Q Consensus 301 ~~~~~~~~~iil~~i~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~ 379 (934)
++..++++.++++++.++++..+ ........|+ ...+..+..++.+++.+||++||++++++.
T Consensus 200 ~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l 263 (917)
T TIGR01116 200 FGELLSKVIGLICILVWVINIGHFNDPALGGGWI----------------QGAIYYFKIAVALAVAAIPEGLPAVITTCL 263 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccchhH----------------HHHHHHHHHHHhhhhhccccccHHHHHHHH
Confidence 99999888877777766554321 1000000111 122345667788999999999999999999
Q ss_pred HHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhh
Q 002339 380 FLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMA 459 (934)
Q Consensus 380 ~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 459 (934)
.+++.+| +++++++|+++.+|+||++++||||||||||+|+|+|.+++..+..+.... .
T Consensus 264 ~~~~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-~---------- 322 (917)
T TIGR01116 264 ALGTRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN-E---------- 322 (917)
T ss_pred HHHHHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc-e----------
Confidence 9999999 788999999999999999999999999999999999999987654321000 0
Q ss_pred hchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeec
Q 002339 460 IDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPE 539 (934)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~ 539 (934)
....+ ..+...+....+..............++.++++||++...
T Consensus 323 ---------------------~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~ 367 (917)
T TIGR01116 323 ---------------------FCVTG--------------TTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLD 367 (917)
T ss_pred ---------------------EEecC--------------CccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeee
Confidence 00000 0000000000000000011234566788999999998765
Q ss_pred ccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCC
Q 002339 540 LNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDG 619 (934)
Q Consensus 540 ~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~ 619 (934)
.++..+... ..++|+|.||++++++.|+....+..........+.. ......|++++.+||||+|||||++++. ++
T Consensus 368 ~~~~~~~~~-~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~-~~ 443 (917)
T TIGR01116 368 FNERKGVYE-KVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKP-ST 443 (917)
T ss_pred ccccCCcee-eccChhHHHHHHHHHHcCCCchhcccccccccccchh--HHHHhhcceeeecccChhhCeEEEEEee-CC
Confidence 433222221 2489999999999999998776544333222111100 0013568899999999999999999986 46
Q ss_pred cEEEEEcccchhhhHhhhcc----c------cccHHHHHHHHHHHHh-cCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhh
Q 002339 620 QILLLCKGADSIIFDRLSKN----G------RMYEEATTKLLNEYGE-AGLRTLALAYKQLDESEYSAWNSEFQKAKSSI 688 (934)
Q Consensus 620 ~~~l~~KGa~~~i~~~~~~~----~------~~~~~~~~~~~~~~~~-~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~ 688 (934)
++++|+|||||.|+++|+.. + .+..+.+.+++++|+. +|+||+++|||.++.++.. +..
T Consensus 444 ~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~~--------- 513 (917)
T TIGR01116 444 GNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-DLL--------- 513 (917)
T ss_pred cEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc-ccc---------
Confidence 78999999999999999741 1 2245678888999999 9999999999998764321 000
Q ss_pred hhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEc
Q 002339 689 GADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT 768 (934)
Q Consensus 689 ~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~ 768 (934)
.+. ...+.+|+||+|+|+++++||+|++++++|+.|+++||++||+|||+.+||.++|+++|+..++..+.
T Consensus 514 -~~~-----~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~--- 584 (917)
T TIGR01116 514 -SDP-----ANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT--- 584 (917)
T ss_pred -ccc-----hhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc---
Confidence 010 12256789999999999999999999999999999999999999999999999999999986543211
Q ss_pred CCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhh
Q 002339 769 ALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQ 848 (934)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~q 848 (934)
...++|.++..+.+++... ..++..+|||++|+|
T Consensus 585 ----------------------------------------~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~ 618 (917)
T TIGR01116 585 ----------------------------------------FKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSH 618 (917)
T ss_pred ----------------------------------------ceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHH
Confidence 1245566655443333221 123466999999999
Q ss_pred HHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEE-cccchhhHHHhCcEeecC--ccchhhhHhhhchhhhHHhhh
Q 002339 849 KALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGMQAVMASDFSIAQ--FRFLERLLVVHGHWCYKRIAQ 925 (934)
Q Consensus 849 K~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam-~~~e~~~a~~~AD~ii~~--~~~l~~lll~~Gr~~~~~i~~ 925 (934)
|.++|+.+++ .|++|+|+|||.||++||+.||||||| +|++. ++++||+++.+ |+.+.++ +.|||++|.|+++
T Consensus 619 K~~iV~~lq~-~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k 694 (917)
T TIGR01116 619 KSELVELLQE-QGEIVAMTGDGVNDAPALKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQ 694 (917)
T ss_pred HHHHHHHHHh-cCCeEEEecCCcchHHHHHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHH
Confidence 9999999997 899999999999999999999999999 56676 89999999999 6668888 7999999999999
Q ss_pred heEEEeccC
Q 002339 926 MVIIKDFPT 934 (934)
Q Consensus 926 ~i~~~~~k~ 934 (934)
++.|.|+++
T Consensus 695 ~i~~~l~~n 703 (917)
T TIGR01116 695 FIRYMISSN 703 (917)
T ss_pred HHHHHHhcc
Confidence 999999874
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-92 Score=874.76 Aligned_cols=695 Identities=22% Similarity=0.278 Sum_probs=508.7
Q ss_pred CcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHHH
Q 002339 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127 (934)
Q Consensus 48 ~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~r 127 (934)
..++..||+|.+..++.++| +.++++|..|++++++++++++++ ..++.+.+.++++++++.+...+++++.
T Consensus 146 ~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~----~~~~~~~~~i~~i~~~~~~~~~~~~~k~ 217 (1054)
T TIGR01657 146 AQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLL----DEYYYYSLCIVFMSSTSISLSVYQIRKQ 217 (1054)
T ss_pred HHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678899999999887665 889999999999999998888876 3444444445566667777788888877
Q ss_pred hhhhhhhc--cceEEEEeCCCeEEEeecccCccCcEEEec--cCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeee
Q 002339 128 FMQDKEVN--ARKVSVHVGNGVFSYKPWEKIQVGDIVKVE--KDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (934)
Q Consensus 128 ~k~~~~~n--~~~~~V~~r~g~~~~i~~~~L~vGDII~l~--~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~ 203 (934)
.++.+.+. ++.++|+ |||+|++|++++|+|||||.|+ +|+.+||||+|++ |.|.||||+|||||.|+.|.
T Consensus 218 ~~~L~~~~~~~~~v~V~-Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~-----g~~~VdES~LTGES~Pv~K~ 291 (1054)
T TIGR01657 218 MQRLRDMVHKPQSVIVI-RNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS-----GSCIVNESMLTGESVPVLKF 291 (1054)
T ss_pred HHHHHHhhcCCeeEEEE-ECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe-----CcEEEecccccCCccceecc
Confidence 77766654 4689999 8999999999999999999999 9999999999998 77999999999999999998
Q ss_pred cccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeec------CCeEEEEEEEeccc
Q 002339 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN------TAHVYGSVIFTGHD 277 (934)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n------t~~~~gvVv~tG~~ 277 (934)
+.+.... ..+ ..+ ....+.+|++|.||.+.. ++.+.|+|++||.+
T Consensus 292 ~~~~~~~--~~~----------------~~~-----------~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~ 342 (1054)
T TIGR01657 292 PIPDNGD--DDE----------------DLF-----------LYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFS 342 (1054)
T ss_pred cCCcccc--ccc----------------ccc-----------ccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCcc
Confidence 8643100 000 000 011244567777776653 46799999999999
Q ss_pred hhhhhcc---CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHH
Q 002339 278 SKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLA 354 (934)
Q Consensus 278 Tki~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (934)
|..++.. ...+...+++++.+.+++.+++++.++.+++.++.. +... ..| ..
T Consensus 343 T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~-~~~~----~~~--------------------~~ 397 (1054)
T TIGR01657 343 TSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIEL-IKDG----RPL--------------------GK 397 (1054)
T ss_pred ccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcC----CcH--------------------HH
Confidence 9655544 345556788999988887766555544333322211 1100 112 36
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEE
Q 002339 355 HLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL 434 (934)
Q Consensus 355 ~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~ 434 (934)
.+++++.+++.++|++||++++++..++..++ ++++++|+++..+|.||+++++|||||||||+|+|.|.
T Consensus 398 ~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~ 467 (1054)
T TIGR01657 398 IILRSLDIITIVVPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLR 467 (1054)
T ss_pred HHHHHHHHHHhhcCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEE
Confidence 78889999999999999999999999999999 88999999999999999999999999999999999999
Q ss_pred EEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCC
Q 002339 435 KCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNW 514 (934)
Q Consensus 435 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (934)
+++..+...... . ..
T Consensus 468 ~v~~~~~~~~~~--~----------------------------------------------------------~~----- 482 (1054)
T TIGR01657 468 GVQGLSGNQEFL--K----------------------------------------------------------IV----- 482 (1054)
T ss_pred eEecccCccccc--c----------------------------------------------------------cc-----
Confidence 987543210000 0 00
Q ss_pred CCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEe-ecCCe-----EEEEecCCCCC
Q 002339 515 LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYR-RTQSS-----VFIRERYPPKG 588 (934)
Q Consensus 515 ~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~-~~~~~-----~~i~~~~~~~~ 588 (934)
..........+..++++||++....+ ...++|.|.|+++++ |+.+.. ..... ..+... +
T Consensus 483 -~~~~~~~~~~~~~~~a~C~~~~~~~~-------~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~----~ 547 (1054)
T TIGR01657 483 -TEDSSLKPSITHKALATCHSLTKLEG-------KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTD----D 547 (1054)
T ss_pred -ccccccCchHHHHHHHhCCeeEEECC-------EEecCHHHHHHHHhC---CCEEECCCCcccccccccceecc----C
Confidence 00000112246678999999865421 235999999999975 555433 11000 001100 0
Q ss_pred CCceeEEEEeEecCCCCCCceEEEEEEcCC-CcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEE
Q 002339 589 QPVEREFKILNLLDFTSKRKRMSVIVRDED-GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYK 667 (934)
Q Consensus 589 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k 667 (934)
....+++++.+||+|++|||||+++.++ +++++|+|||||.|+++|++.. .++.+.+.+++|+.+|+|||++|||
T Consensus 548 --~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~--~p~~~~~~~~~~a~~G~RVLalA~k 623 (1054)
T TIGR01657 548 --PPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET--VPSDYQEVLKSYTREGYRVLALAYK 623 (1054)
T ss_pred --CCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC--CChhHHHHHHHHHhcCCEEEEEEEe
Confidence 1357999999999999999999999754 5689999999999999999643 6788899999999999999999999
Q ss_pred eCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHH
Q 002339 668 QLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (934)
Q Consensus 668 ~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~t 747 (934)
++++.++.++.+ .+| +.+|+||+|+|+++|+|++|++++++|+.|+++||+++|+|||+..|
T Consensus 624 ~l~~~~~~~~~~----------~~r--------~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 624 ELPKLTLQKAQD----------LSR--------DAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred ecCccchhhhhh----------ccH--------HHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 997543322211 133 56789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCcccCCceEEEEcCCCchhH-HHHHHHHHHHh-----HHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhh
Q 002339 748 AINIGFACSLLRQGMKQICITALNSDSV-GKAAKEAVKDN-----ILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (934)
Q Consensus 748 a~~ia~~~gi~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~ 821 (934)
|.++|++|||++++..++..+....+.. ...+.....++ .....................+.++++|+.++.+.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999987655554432110000 00000000000 00000000000000011223467899999998764
Q ss_pred hHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEe
Q 002339 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFS 901 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~i 901 (934)
+. ..+.+.++...+ .||||++|+||.++|+.+|+ .|+.|+|+|||+||++||++|||||||++.| |..+|||+
T Consensus 766 ~~-~~~~l~~~~~~~--~VfAR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ALK~AdVGIam~~~d---as~AA~f~ 838 (1054)
T TIGR01657 766 AH-SPELLLRLLSHT--TVFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCGALKQADVGISLSEAE---ASVAAPFT 838 (1054)
T ss_pred Hh-hHHHHHHHHhcC--eEEEecCHHHHHHHHHHHHh-CCCeEEEEeCChHHHHHHHhcCcceeecccc---ceeecccc
Confidence 32 223344444443 49999999999999999998 8999999999999999999999999998776 56899999
Q ss_pred ecCccc--hhhhHhhhchhhhHHhhhheEEE
Q 002339 902 IAQFRF--LERLLVVHGHWCYKRIAQMVIIK 930 (934)
Q Consensus 902 i~~~~~--l~~lll~~Gr~~~~~i~~~i~~~ 930 (934)
+.++++ +.++ +.+||.+|.++.+++.|.
T Consensus 839 l~~~~~~~I~~~-I~eGR~~l~~~~~~~~~~ 868 (1054)
T TIGR01657 839 SKLASISCVPNV-IREGRCALVTSFQMFKYM 868 (1054)
T ss_pred cCCCcHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 987555 8888 889999999998876654
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-89 Score=829.65 Aligned_cols=611 Identities=20% Similarity=0.254 Sum_probs=483.8
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHH
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~ 126 (934)
...|+++||+|.++.++.+.++ +.|++||.+|++++++++++++++. ..|. ..+.++++++++.+.+++++++
T Consensus 73 a~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~~---~~~~-~a~~I~~iv~i~~~i~~~qe~r 145 (902)
T PRK10517 73 VESAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYAT---EDLF-AAGVIALMVAISTLLNFIQEAR 145 (902)
T ss_pred HHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHH---ccHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 4467889999999999887654 8899999999999999999999873 3343 4444567778888889999999
Q ss_pred Hhhhhhhh---ccceEEEEeCC------CeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCC
Q 002339 127 RFMQDKEV---NARKVSVHVGN------GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGET 197 (934)
Q Consensus 127 r~k~~~~~---n~~~~~V~~r~------g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs 197 (934)
..++.+.+ ...+++|+ || |++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||
T Consensus 146 a~~~~~~L~~l~~~~a~Vi-R~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES 220 (902)
T PRK10517 146 STKAADALKAMVSNTATVL-RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGES 220 (902)
T ss_pred HHHHHHHHHhhCCCeEEEE-ECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCC
Confidence 88775444 45789999 77 789999999999999999999999999999999443 799999999999
Q ss_pred cceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccc
Q 002339 198 NLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHD 277 (934)
Q Consensus 198 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~ 277 (934)
.|+.|.+++..... .+..+.....|+||.+.+|. +.++|++||.+
T Consensus 221 ~PV~K~~~~~~~~~--------------~~~~~~~n~vfaGT~V~~G~---------------------~~~vV~atG~~ 265 (902)
T PRK10517 221 LPVEKFATTRQPEH--------------SNPLECDTLCFMGTNVVSGT---------------------AQAVVIATGAN 265 (902)
T ss_pred Cceecccccccccc--------------cCccccccceeeCceEeeee---------------------EEEEEEEeccc
Confidence 99999887532000 00001112345555555555 99999999999
Q ss_pred hhhhhc---cCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHH
Q 002339 278 SKVMQN---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLA 354 (934)
Q Consensus 278 Tki~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (934)
|.+++. ......+++|+++.+++++.++..+.++++.+.++++.+... .| ..
T Consensus 266 T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~-----~~--------------------~~ 320 (902)
T PRK10517 266 TWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG-----DW--------------------WE 320 (902)
T ss_pred cHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC-----CH--------------------HH
Confidence 976554 445667789999999999998888887777766555332110 12 35
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEE
Q 002339 355 HLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL 434 (934)
Q Consensus 355 ~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~ 434 (934)
.+..++.+++.+||++||++++++...++.+| +++++++|+++.+|.||++|+||||||||||+|+|.+.
T Consensus 321 ~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~ 390 (902)
T PRK10517 321 AALFALSVAVGLTPEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLE 390 (902)
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccceEEEE
Confidence 77888999999999999999999999999888 88999999999999999999999999999999999998
Q ss_pred EEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCC
Q 002339 435 KCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNW 514 (934)
Q Consensus 435 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (934)
++.. ..+..
T Consensus 391 ~~~~---~~~~~-------------------------------------------------------------------- 399 (902)
T PRK10517 391 NHTD---ISGKT-------------------------------------------------------------------- 399 (902)
T ss_pred EEec---CCCCC--------------------------------------------------------------------
Confidence 7631 00000
Q ss_pred CCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeE
Q 002339 515 LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVERE 594 (934)
Q Consensus 515 ~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~ 594 (934)
..+++...++|.... . ..+||.|.|++.++...+.. .....
T Consensus 400 --------~~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~~~~--------------------~~~~~ 440 (902)
T PRK10517 400 --------SERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEESAR--------------------SLASR 440 (902)
T ss_pred --------HHHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhcchh--------------------hhhhc
Confidence 012333334433221 0 14799999999998653200 01345
Q ss_pred EEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhcc---c------cccHHHHHHHHHHHHhcCCeEEEEE
Q 002339 595 FKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---G------RMYEEATTKLLNEYGEAGLRTLALA 665 (934)
Q Consensus 595 ~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~------~~~~~~~~~~~~~~~~~Glr~l~~A 665 (934)
|+.++.+||||+||||+++++..++.+.+++|||+|.|+++|+.. + ++..+.+.+..++++.+|+|++++|
T Consensus 441 ~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA 520 (902)
T PRK10517 441 WQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVA 520 (902)
T ss_pred CceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 777889999999999999998877888999999999999999751 1 1234567777889999999999999
Q ss_pred EEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCH
Q 002339 666 YKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (934)
Q Consensus 666 ~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~ 745 (934)
||+++.++. .+ + ...|+|++|+|+++|+||+||+++++|++|+++||+|+|+|||+.
T Consensus 521 ~k~~~~~~~-~~-------------~---------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~ 577 (902)
T PRK10517 521 TKYLPAREG-DY-------------Q---------RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSE 577 (902)
T ss_pred EecCCcccc-cc-------------c---------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCH
Confidence 998865321 00 0 113689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHH
Q 002339 746 ETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDM 825 (934)
Q Consensus 746 ~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~ 825 (934)
.||.++|+++||... . +++|.+++...++++
T Consensus 578 ~tA~~IA~~lGI~~~--~-----------------------------------------------v~~G~el~~l~~~el 608 (902)
T PRK10517 578 LVAAKVCHEVGLDAG--E-----------------------------------------------VLIGSDIETLSDDEL 608 (902)
T ss_pred HHHHHHHHHcCCCcc--C-----------------------------------------------ceeHHHHHhCCHHHH
Confidence 999999999999421 1 456666665544444
Q ss_pred HHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcEeecC
Q 002339 826 KHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~ii~~ 904 (934)
...... ..+|+|++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ |++. |+++||++|++
T Consensus 609 ~~~~~~------~~VfAr~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLld 679 (902)
T PRK10517 609 ANLAER------TTLFARLTPMHKERIVTLLKR-EGHVVGFMGDGINDAPALRAADIGISVDGAVDI--AREAADIILLE 679 (902)
T ss_pred HHHHhh------CcEEEEcCHHHHHHHHHHHHH-CCCEEEEECCCcchHHHHHhCCEEEEeCCcCHH--HHHhCCEEEec
Confidence 433322 239999999999999999998 8999999999999999999999999994 6776 99999999998
Q ss_pred ccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 905 FRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 905 ~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
+++ +..+ +.+||.+|.|+++++.|.+
T Consensus 680 d~~~~I~~a-i~~gR~i~~nI~k~i~~~l 707 (902)
T PRK10517 680 KSLMVLEEG-VIEGRRTFANMLKYIKMTA 707 (902)
T ss_pred CChHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 776 7777 8999999999999998765
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-88 Score=826.05 Aligned_cols=639 Identities=20% Similarity=0.239 Sum_probs=496.0
Q ss_pred CCCcCCCCCCCceeeccccchhhhhHHHHHHHH-hhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHH
Q 002339 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQF-NRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALED 124 (934)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf-~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~ 124 (934)
+.++|+++||+|.+..++.+.++ +.+++|| .+|++++++++++++++. ..|...++ +++++++.++..++++
T Consensus 29 ev~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~~---g~~~~~~~-i~~~i~~~~~i~~~qe 101 (884)
T TIGR01522 29 EASHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVFM---GNIDDAVS-ITLAILIVVTVGFVQE 101 (884)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHHH---cchhhHHH-HHhHHHHHHHHHHHHH
Confidence 34567889999999988765543 8899999 899999999999999874 34444443 4455566677888999
Q ss_pred HHHhhhhhhhc---cceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCccee
Q 002339 125 WRRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKV 201 (934)
Q Consensus 125 ~~r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~ 201 (934)
++..++.+.+. +.+++|+ |||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.
T Consensus 102 ~~a~~~l~~L~~l~~~~~~Vi-Rdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~ 176 (884)
T TIGR01522 102 YRSEKSLEALNKLVPPECHLI-REGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVS 176 (884)
T ss_pred HHHHHHHHHHhccCCCeeEEE-ECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCccee
Confidence 98888776654 5789999 89999999999999999999999999999999999443 8999999999999999
Q ss_pred eecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhh
Q 002339 202 KRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM 281 (934)
Q Consensus 202 K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~ 281 (934)
|.+++..... ..+..+.....|+||.+.+|. +.++|++||.+|.++
T Consensus 177 K~~~~~~~~~-------------~~~~~~~~n~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~g 222 (884)
T TIGR01522 177 KVTAPIPAAT-------------NGDLAERSNIAFMGTLVRCGH---------------------GKGIVVGTGSNTEFG 222 (884)
T ss_pred cccccccccc-------------cccccccCceEEeCCEEEeee---------------------EEEEEEEecCccHHH
Confidence 9986532100 000112222346666666555 999999999999766
Q ss_pred hc---cCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHH
Q 002339 282 QN---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358 (934)
Q Consensus 282 ~~---~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (934)
+. .......++|+++.++++..++.++.++++++.+++..+ .. ..| ...+..
T Consensus 223 ki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~----~~~--------------------~~~~~~ 277 (884)
T TIGR01522 223 AVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-QG----KDW--------------------LEMFTI 277 (884)
T ss_pred HHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc----CCH--------------------HHHHHH
Confidence 54 445566689999999999998877665555444433211 10 012 357778
Q ss_pred HHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEE
Q 002339 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSV 438 (934)
Q Consensus 359 ~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i 438 (934)
++.+++.+|||+||++++++...++.++ +++++++|+++.+|+||++++||||||||||+|+|.+.+++.
T Consensus 278 ~v~llv~aiP~~Lp~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~ 347 (884)
T TIGR01522 278 SVSLAVAAIPEGLPIIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWT 347 (884)
T ss_pred HHHHHHHHccchHHHHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEe
Confidence 8899999999999999999999999988 889999999999999999999999999999999999999987
Q ss_pred cCeeccC-CchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCC
Q 002339 439 AGTAYGV-SPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKE 517 (934)
Q Consensus 439 ~~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (934)
.+..+.. .... .+ ....+..++. ....
T Consensus 348 ~~~~~~~~~~~~------------~~----------------------------------~~~~~~~~~~------~~~~ 375 (884)
T TIGR01522 348 SDGLHTMLNAVS------------LN----------------------------------QFGEVIVDGD------VLHG 375 (884)
T ss_pred cCceEeeccCCc------------cC----------------------------------CCCccccccc------cccc
Confidence 5432210 0000 00 0000000000 0001
Q ss_pred CChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEE
Q 002339 518 PNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597 (934)
Q Consensus 518 ~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 597 (934)
..+..+.+++.+.++||+......+ + ...++|.|.||+++++..|+.. ....|+.
T Consensus 376 ~~~~~~~~~l~~~~l~~~~~~~~~~--~---~~~g~p~e~All~~~~~~~~~~--------------------~~~~~~~ 430 (884)
T TIGR01522 376 FYTVAVSRILEAGNLCNNAKFRNEA--D---TLLGNPTDVALIELLMKFGLDD--------------------LRETYIR 430 (884)
T ss_pred ccCHHHHHHHHHHhhhCCCeecCCC--C---CcCCChHHHHHHHHHHHcCcHh--------------------HHhhCcE
Confidence 1223466788889999988654321 1 1237999999999999877531 1245778
Q ss_pred eEecCCCCCCceEEEEEEcC-CCcEEEEEcccchhhhHhhhcc----c------cccHHHHHHHHHHHHhcCCeEEEEEE
Q 002339 598 LNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKN----G------RMYEEATTKLLNEYGEAGLRTLALAY 666 (934)
Q Consensus 598 l~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~----~------~~~~~~~~~~~~~~~~~Glr~l~~A~ 666 (934)
++.+||+|.||||+++++.+ ++++++|+|||||.|+.+|+.. + ++.++.+.+.+++++.+|+|++++||
T Consensus 431 ~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~ 510 (884)
T TIGR01522 431 VAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFAS 510 (884)
T ss_pred EeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 89999999999999999874 5778999999999999999741 1 12345677888999999999999999
Q ss_pred EeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHH
Q 002339 667 KQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (934)
Q Consensus 667 k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ 746 (934)
|.+ +.+|+|+|+++++|++|++++++|+.|+++||+++|+|||+..
T Consensus 511 ~~~----------------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~ 556 (884)
T TIGR01522 511 GPE----------------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQE 556 (884)
T ss_pred EcC----------------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHH
Confidence 865 2589999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHH
Q 002339 747 TAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMK 826 (934)
Q Consensus 747 ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~ 826 (934)
||.++|+++||...... +++|.+++...++++.
T Consensus 557 tA~~ia~~~Gi~~~~~~-----------------------------------------------~v~g~~l~~~~~~~l~ 589 (884)
T TIGR01522 557 TAVSIARRLGMPSKTSQ-----------------------------------------------SVSGEKLDAMDDQQLS 589 (884)
T ss_pred HHHHHHHHcCCCCCCCc-----------------------------------------------eeEhHHhHhCCHHHHH
Confidence 99999999999764322 3456555544444443
Q ss_pred HHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc--ccchhhHHHhCcEeecC
Q 002339 827 HHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 827 ~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~~~a~~~AD~ii~~ 904 (934)
+.+. +..+|||++|+||..+|+.+|+ .|+.|+|+|||.||++||+.|||||+|+ |++. ++++||+++.+
T Consensus 590 ~~~~------~~~Vfar~~P~~K~~iv~~lq~-~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v--a~~aaDivl~d 660 (884)
T TIGR01522 590 QIVP------KVAVFARASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV--AKEAADMILTD 660 (884)
T ss_pred HHhh------cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHHhCCeeEecCCCcCHH--HHHhcCEEEcC
Confidence 3322 3459999999999999999998 8999999999999999999999999994 4565 88999999988
Q ss_pred ccc--hhhhHhhhchhhhHHhhhheEEEecc
Q 002339 905 FRF--LERLLVVHGHWCYKRIAQMVIIKDFP 933 (934)
Q Consensus 905 ~~~--l~~lll~~Gr~~~~~i~~~i~~~~~k 933 (934)
+++ +..+ +.+||.+|.|+++++.|.+..
T Consensus 661 d~~~~i~~~-i~~gR~~~~ni~k~i~~~l~~ 690 (884)
T TIGR01522 661 DDFATILSA-IEEGKGIFNNIKNFITFQLST 690 (884)
T ss_pred CCHHHHHHH-HHHHHHHHHHHHHHHHHHhhh
Confidence 555 7877 999999999999999998765
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-88 Score=820.52 Aligned_cols=627 Identities=20% Similarity=0.243 Sum_probs=480.5
Q ss_pred CCCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc--CCC------CCccccchhhHHHHHHHH
Q 002339 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LSP------FSPVSMLLPLAIVVGVSM 117 (934)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~--~~~------~~~~~~~~~l~~v~~~~~ 117 (934)
+...|+++||+|.++.++...++ +.+++||.+|+.+.++++++++++. +.+ ..|.. .+.++++++++.
T Consensus 50 ea~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~-~~iI~~~v~l~~ 125 (903)
T PRK15122 50 DAAERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTG-VIIILTMVLLSG 125 (903)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhH-HHHHHHHHHHHH
Confidence 34568899999999988866543 7899999999999999999999874 111 13333 444557777888
Q ss_pred HHHHHHHHHHhhhhhhh---ccceEEEEeCC------CeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEE
Q 002339 118 AKEALEDWRRFMQDKEV---NARKVSVHVGN------GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYV 188 (934)
Q Consensus 118 ~~~~~~~~~r~k~~~~~---n~~~~~V~~r~------g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~V 188 (934)
+.+++++++..++.+.+ ...+++|+ || |++++|++++|+|||||.|++||.|||||+|+++++ +.|
T Consensus 126 ~i~~~qe~~a~~a~~~L~~l~~~~~~V~-Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~V 200 (903)
T PRK15122 126 LLRFWQEFRSNKAAEALKAMVRTTATVL-RRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFI 200 (903)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCceEEE-ECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEE
Confidence 99999999988775554 45789999 67 589999999999999999999999999999999443 799
Q ss_pred EeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEE
Q 002339 189 ETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVY 268 (934)
Q Consensus 189 des~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~ 268 (934)
|||+|||||.|+.|.+............ ..+. ..+..+.....|+||.+.+|+ +.
T Consensus 201 DES~LTGES~PV~K~~~~~~~~~~~~~~---~~~~-~~~~~~~~n~vfaGT~V~~G~---------------------~~ 255 (903)
T PRK15122 201 SQAVLTGEALPVEKYDTLGAVAGKSADA---LADD-EGSLLDLPNICFMGTNVVSGT---------------------AT 255 (903)
T ss_pred EccccCCCCcceeeeccccccccccccc---cccc-cCCcccccceEEeCCEEEeee---------------------EE
Confidence 9999999999999986311000000000 0000 000001112345555555555 99
Q ss_pred EEEEEeccchhhhhccCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCC
Q 002339 269 GSVIFTGHDSKVMQNATT--SPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPG 346 (934)
Q Consensus 269 gvVv~tG~~Tki~~~~~~--~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (934)
++|++||.+|.+++..+. .+..++++++.++++..++..+.++++.+.+++..+.. ..|
T Consensus 256 ~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~-----~~~-------------- 316 (903)
T PRK15122 256 AVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK-----GDW-------------- 316 (903)
T ss_pred EEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-----CCH--------------
Confidence 999999999976554432 14456899999999988887776666655544332211 012
Q ss_pred CCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCce
Q 002339 347 KPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTL 426 (934)
Q Consensus 347 ~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTL 426 (934)
...+.+++.+++.+||++||++++++...++.+| +++++++|+++.+|+||++++|||||||||
T Consensus 317 ------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~vIc~DKTGTL 380 (903)
T PRK15122 317 ------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMDVLCTDKTGTL 380 (903)
T ss_pred ------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCcEEEecCCccc
Confidence 3577788999999999999999999999999888 889999999999999999999999999999
Q ss_pred eecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCcccc
Q 002339 427 TCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFED 506 (934)
Q Consensus 427 T~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (934)
|+|+|.+.+++..+. ..
T Consensus 381 T~~~m~V~~~~~~~~---~~------------------------------------------------------------ 397 (903)
T PRK15122 381 TQDRIILEHHLDVSG---RK------------------------------------------------------------ 397 (903)
T ss_pred ccCeEEEEEEEcCCC---CC------------------------------------------------------------
Confidence 999999988752110 00
Q ss_pred ccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCC
Q 002339 507 SRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPP 586 (934)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~ 586 (934)
. .+++...++|... . . ..+||.|.|+++++...|...
T Consensus 398 -------------~---~~~l~~a~l~s~~--~--~-------~~~~p~e~All~~a~~~~~~~---------------- 434 (903)
T PRK15122 398 -------------D---ERVLQLAWLNSFH--Q--S-------GMKNLMDQAVVAFAEGNPEIV---------------- 434 (903)
T ss_pred -------------h---HHHHHHHHHhCCC--C--C-------CCCChHHHHHHHHHHHcCchh----------------
Confidence 0 0122222222110 0 0 147999999999998766421
Q ss_pred CCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhcc---------ccccHHHHHHHHHHHHhc
Q 002339 587 KGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGEA 657 (934)
Q Consensus 587 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~ 657 (934)
....|+.++.+||++.||+|++++++.++++++++|||++.|+++|+.. +.+.++.+.+..++++.+
T Consensus 435 ----~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~ 510 (903)
T PRK15122 435 ----KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNAD 510 (903)
T ss_pred ----hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhC
Confidence 0234667788999999999999999878889999999999999999741 112345677788999999
Q ss_pred CCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeE
Q 002339 658 GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKI 737 (934)
Q Consensus 658 Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv 737 (934)
|+|++++|||.++.++..++ ..+..|+||+|+|+++++||+|++++++|++|+++||+|
T Consensus 511 G~rvlavA~k~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v 569 (903)
T PRK15122 511 GFRVLLVATREIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAV 569 (903)
T ss_pred CCEEEEEEEeccCccccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeE
Confidence 99999999999865432110 012347899999999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhh
Q 002339 738 WVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTL 817 (934)
Q Consensus 738 ~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l 817 (934)
+|+|||+..||.++|+++||... . +++|.++
T Consensus 570 ~miTGD~~~tA~aIA~~lGI~~~--~-----------------------------------------------vi~G~el 600 (903)
T PRK15122 570 KVLTGDNPIVTAKICREVGLEPG--E-----------------------------------------------PLLGTEI 600 (903)
T ss_pred EEECCCCHHHHHHHHHHcCCCCC--C-----------------------------------------------ccchHhh
Confidence 99999999999999999999521 1 4567666
Q ss_pred hHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHH
Q 002339 818 AYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVM 896 (934)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~ 896 (934)
+.+.++++.+.... ..+|||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ |++. |++
T Consensus 601 ~~~~~~el~~~v~~------~~VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdv--Ake 671 (903)
T PRK15122 601 EAMDDAALAREVEE------RTVFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDADVGISVDSGADI--AKE 671 (903)
T ss_pred hhCCHHHHHHHhhh------CCEEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCCEEEEeCcccHH--HHH
Confidence 66555444443322 339999999999999999998 8999999999999999999999999995 7777 999
Q ss_pred hCcEeecCccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 897 ASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 897 ~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
+||++|+++++ +..+ +.+||..|.|+++++.|.+
T Consensus 672 aADiVLldd~f~~Iv~a-i~~gR~i~~nI~k~i~~~l 707 (903)
T PRK15122 672 SADIILLEKSLMVLEEG-VIKGRETFGNIIKYLNMTA 707 (903)
T ss_pred hcCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 99999998766 7887 8999999999999988765
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-87 Score=818.83 Aligned_cols=611 Identities=20% Similarity=0.234 Sum_probs=481.3
Q ss_pred CCCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHH
Q 002339 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (934)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~ 125 (934)
+..+|+++||+|.++.++.+.++ +.+++||..|++++++++++++++. ..| ...+.++++++++.+...++++
T Consensus 38 ev~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~p~~~iL~~~a~ls~~~---~~~-~~~~iI~~iv~~~~~i~~~~e~ 110 (867)
T TIGR01524 38 EVTERLAEFGPNQTVEEKKVPNL---RLLIRAFNNPFIYILAMLMGVSYLT---DDL-EATVIIALMVLASGLLGFIQES 110 (867)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhHHHHHHHHHHHHHHHH---hhH-HHHHHhhhHHHHHHHHHHHHHH
Confidence 34578899999999998865443 8899999999999999999999873 333 3344455777788888889998
Q ss_pred HHhhhhh---hhccceEEEEeC------CCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCC
Q 002339 126 RRFMQDK---EVNARKVSVHVG------NGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGE 196 (934)
Q Consensus 126 ~r~k~~~---~~n~~~~~V~~r------~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGE 196 (934)
+..++.. .+.+.+++|+ | ||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+||||
T Consensus 111 ~a~ka~~~L~~l~~~~~~V~-R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGE 185 (867)
T TIGR01524 111 RAERAAYALKNMVKNTATVL-RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGE 185 (867)
T ss_pred HHHHHHHHHhhhccCeeEEE-EecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCC
Confidence 8877654 4445789999 7 8999999999999999999999999999999999443 79999999999
Q ss_pred CcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecc
Q 002339 197 TNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGH 276 (934)
Q Consensus 197 s~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~ 276 (934)
|.|+.|.+++.... . .+..+.....|+||.+.+|. +.++|++||.
T Consensus 186 S~PV~K~~~~~~~~---~-----------~~~~~~~n~vfaGT~v~~G~---------------------~~~~V~~tG~ 230 (867)
T TIGR01524 186 SLPVEKFVEDKRAR---D-----------PEILERENLCFMGTNVLSGH---------------------AQAVVLATGS 230 (867)
T ss_pred CCcccccCCccccc---c-----------ccccccccceecCCeEEEeE---------------------EEEEEEEEcC
Confidence 99999988753200 0 00001122346666666666 9999999999
Q ss_pred chhhhhcc---CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHH
Q 002339 277 DSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGL 353 (934)
Q Consensus 277 ~Tki~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (934)
+|.+++.. .. +..++++++.++++..++..+.++++++.++++.+... .| .
T Consensus 231 ~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~-----~~--------------------~ 284 (867)
T TIGR01524 231 STWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG-----DW--------------------L 284 (867)
T ss_pred ccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC-----CH--------------------H
Confidence 99765543 34 55578999999999999988888877766555332110 12 3
Q ss_pred HHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEE
Q 002339 354 AHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDF 433 (934)
Q Consensus 354 ~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~ 433 (934)
..+..++.+++.+||++||++++++...++.+| +++++++|+++.+|.||++++||||||||||+|+|++
T Consensus 285 ~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v 354 (867)
T TIGR01524 285 EAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIEL 354 (867)
T ss_pred HHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCeEEE
Confidence 577888999999999999999999999999888 8899999999999999999999999999999999999
Q ss_pred EEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccC
Q 002339 434 LKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGN 513 (934)
Q Consensus 434 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (934)
.++.... .. .
T Consensus 355 ~~~~~~~----~~-~----------------------------------------------------------------- 364 (867)
T TIGR01524 355 EKHIDSS----GE-T----------------------------------------------------------------- 364 (867)
T ss_pred EEEecCC----CC-C-----------------------------------------------------------------
Confidence 8864110 00 0
Q ss_pred CCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCcee
Q 002339 514 WLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593 (934)
Q Consensus 514 ~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~ 593 (934)
..+++...++|+... ...+||.|.|+++++....... ...
T Consensus 365 ---------~~~~l~~a~l~~~~~-----------~~~~~p~~~Al~~~~~~~~~~~--------------------~~~ 404 (867)
T TIGR01524 365 ---------SERVLKMAWLNSYFQ-----------TGWKNVLDHAVLAKLDESAARQ--------------------TAS 404 (867)
T ss_pred ---------HHHHHHHHHHhCCCC-----------CCCCChHHHHHHHHHHhhchhh--------------------Hhh
Confidence 012333333332210 0136999999999987532100 124
Q ss_pred EEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhcc---------ccccHHHHHHHHHHHHhcCCeEEEE
Q 002339 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGEAGLRTLAL 664 (934)
Q Consensus 594 ~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~Glr~l~~ 664 (934)
.++.++.+||+|+||||+++++++++..++|+|||++.|+++|+.. +++.++.+.+.+++++.+|+|++++
T Consensus 405 ~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlav 484 (867)
T TIGR01524 405 RWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAV 484 (867)
T ss_pred cCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 5677888999999999999999776678999999999999999751 1123456778889999999999999
Q ss_pred EEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCC
Q 002339 665 AYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (934)
Q Consensus 665 A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~ 744 (934)
|||+++.++.. + .+..|.+|+|+|+++++||+|++++++|++|+++||+++|+|||+
T Consensus 485 A~~~~~~~~~~-~----------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~ 541 (867)
T TIGR01524 485 ATKTLKVGEAD-F----------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDN 541 (867)
T ss_pred EEeccCccccc-c----------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCC
Confidence 99998654210 0 012368999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHH
Q 002339 745 METAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDD 824 (934)
Q Consensus 745 ~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~ 824 (934)
..||.++|+++||...+ +++|.+++...+++
T Consensus 542 ~~tA~aIA~~lGI~~~~-------------------------------------------------v~~g~~l~~~~~~e 572 (867)
T TIGR01524 542 EIVTARICQEVGIDAND-------------------------------------------------FLLGADIEELSDEE 572 (867)
T ss_pred HHHHHHHHHHcCCCCCC-------------------------------------------------eeecHhhhhCCHHH
Confidence 99999999999995321 34555554443333
Q ss_pred HHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcEeec
Q 002339 825 MKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDFSIA 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~ii~ 903 (934)
+.+... +..+|||++|+||.++|+.+|+ .|++|+|+|||.||+|||+.|||||||+ |++. |+++||++|+
T Consensus 573 l~~~~~------~~~vfAr~~Pe~K~~iV~~lq~-~G~vVam~GDGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLl 643 (867)
T TIGR01524 573 LARELR------KYHIFARLTPMQKSRIIGLLKK-AGHTVGFLGDGINDAPALRKADVGISVDTAADI--AKEASDIILL 643 (867)
T ss_pred HHHHhh------hCeEEEECCHHHHHHHHHHHHh-CCCEEEEECCCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEe
Confidence 333222 2349999999999999999998 8999999999999999999999999995 6777 9999999999
Q ss_pred Cccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 904 QFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 904 ~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
++++ +..+ +.+||.+|.|+++++.|.+
T Consensus 644 dd~~~~I~~a-i~~gR~i~~ni~k~i~~~l 672 (867)
T TIGR01524 644 EKSLMVLEEG-VIEGRNTFGNILKYLKMTA 672 (867)
T ss_pred cCChHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 8776 7777 8999999999999998765
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-87 Score=802.37 Aligned_cols=588 Identities=20% Similarity=0.257 Sum_probs=480.0
Q ss_pred CcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHHH
Q 002339 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127 (934)
Q Consensus 48 ~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~r 127 (934)
++|+++||+|.++..+.+.| +.|+++|..|+++.++++++++++. ..|...++ ++++++++++.+++++++.
T Consensus 8 ~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~---~~~~~~~~-i~~~~~i~~~i~~~qe~~a 79 (755)
T TIGR01647 8 KKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIAL---ENWVDFVI-ILGLLLLNATIGFIEENKA 79 (755)
T ss_pred HHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh---cchhhhhh-hhhhhHHHHHHHHHHHHHH
Confidence 46788999999998666654 7889999999999999999999884 34444444 5577778888899999998
Q ss_pred hhhhhhh---ccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCce-EEEEeecCCCCCcceeee
Q 002339 128 FMQDKEV---NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGI-CYVETMNLDGETNLKVKR 203 (934)
Q Consensus 128 ~k~~~~~---n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~-~~Vdes~LtGEs~~~~K~ 203 (934)
.++.+.+ .+.+++|+ |||++++|++++|+|||||.|++||.|||||+|++ |. +.||||+|||||.|+.|.
T Consensus 80 ~~~~~~L~~~~~~~~~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~-----g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 80 GNAVEALKQSLAPKARVL-RDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE-----GDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHhhCCCeEEEE-ECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe-----cCceEEEcccccCCccceEec
Confidence 8876554 45889999 89999999999999999999999999999999999 54 899999999999999998
Q ss_pred cccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhh-
Q 002339 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ- 282 (934)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~- 282 (934)
+++.. |+||.+.+|. +.++|++||.+|.+++
T Consensus 154 ~~~~v---------------------------~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~i 185 (755)
T TIGR01647 154 TGDIA---------------------------YSGSTVKQGE---------------------AEAVVTATGMNTFFGKA 185 (755)
T ss_pred cCCee---------------------------eccCEEEccE---------------------EEEEEEEcCCccHHHHH
Confidence 87554 9999999998 9999999999997655
Q ss_pred --ccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHHH
Q 002339 283 --NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTAL 360 (934)
Q Consensus 283 --~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 360 (934)
...+.+..++++|+.++++..+++++.++++++.++++.+.... .| ...+.+++
T Consensus 186 ~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~----~~--------------------~~~~~~~i 241 (755)
T TIGR01647 186 AALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE----SF--------------------REGLQFAL 241 (755)
T ss_pred HHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CH--------------------HHHHHHHH
Confidence 45566667799999999999999888888887776654331110 12 35678889
Q ss_pred HHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcC
Q 002339 361 ILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAG 440 (934)
Q Consensus 361 ~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~ 440 (934)
.+++.+|||+||++++++..+++.++ +++++++|+++.+|.||.+|+||||||||||+|+|.+.+++..+
T Consensus 242 ~vlv~a~P~~Lp~~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~ 311 (755)
T TIGR01647 242 VLLVGGIPIAMPAVLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFF 311 (755)
T ss_pred HHHHHhCCcchHHHHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecC
Confidence 99999999999999999999999988 89999999999999999999999999999999999999987532
Q ss_pred eeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCCh
Q 002339 441 TAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNV 520 (934)
Q Consensus 441 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (934)
..+.
T Consensus 312 ~~~~---------------------------------------------------------------------------- 315 (755)
T TIGR01647 312 NGFD---------------------------------------------------------------------------- 315 (755)
T ss_pred CCCC----------------------------------------------------------------------------
Confidence 1000
Q ss_pred hHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEe
Q 002339 521 DTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNL 600 (934)
Q Consensus 521 ~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~ 600 (934)
..+++...++|+.. .++||.|.|+++++++.+. ....|++++.
T Consensus 316 --~~~~l~~a~~~~~~-------------~~~~pi~~Ai~~~~~~~~~----------------------~~~~~~~~~~ 358 (755)
T TIGR01647 316 --KDDVLLYAALASRE-------------EDQDAIDTAVLGSAKDLKE----------------------ARDGYKVLEF 358 (755)
T ss_pred --HHHHHHHHHHhCCC-------------CCCChHHHHHHHHHHHhHH----------------------HHhcCceEEE
Confidence 01234444555420 1479999999998875430 0244677889
Q ss_pred cCCCCCCceEEEEEEcCC-CcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHH
Q 002339 601 LDFTSKRKRMSVIVRDED-GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNS 679 (934)
Q Consensus 601 ~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~ 679 (934)
+||++.+|+|+++++.++ |+.++++|||++.|+++|+... +.++.+.+.+++++.+|+|++++|+|+.
T Consensus 359 ~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~-~~~~~~~~~~~~~~~~G~rvl~vA~~~~---------- 427 (755)
T TIGR01647 359 VPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKK-EIEEKVEEKVDELASRGYRALGVARTDE---------- 427 (755)
T ss_pred eccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEEEcC----------
Confidence 999999999999998764 7788999999999999997532 3556778889999999999999999721
Q ss_pred HHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 680 EFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 680 ~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
|.+|+|+|+++|+||+||+++++|++|+++||+++|+|||+..||.++|+++||.+
T Consensus 428 ------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~ 483 (755)
T TIGR01647 428 ------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT 483 (755)
T ss_pred ------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 36899999999999999999999999999999999999999999999999999964
Q ss_pred CCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCce
Q 002339 760 QGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASV 839 (934)
Q Consensus 760 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~ 839 (934)
.. + .+ ++ +.+|..++...++++.+...+ ..
T Consensus 484 ~~---~--~~---~~------------------------------------l~~~~~~~~~~~~~~~~~~~~------~~ 513 (755)
T TIGR01647 484 NI---Y--TA---DV------------------------------------LLKGDNRDDLPSGELGEMVED------AD 513 (755)
T ss_pred CC---c--CH---HH------------------------------------hcCCcchhhCCHHHHHHHHHh------CC
Confidence 20 0 00 00 111222211112222222222 23
Q ss_pred EEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcEeecCccc--hhhhHhhhc
Q 002339 840 ICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDFSIAQFRF--LERLLVVHG 916 (934)
Q Consensus 840 i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~ii~~~~~--l~~lll~~G 916 (934)
+|||++|+||.++|+.+|+ .|++|+|+|||.||+|+|++|||||||+ |++. |+++||++|+++++ +..+ +..|
T Consensus 514 vfAr~~Pe~K~~iV~~lq~-~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdv--AkeaADivLl~d~l~~I~~a-i~~g 589 (755)
T TIGR01647 514 GFAEVFPEHKYEIVEILQK-RGHLVGMTGDGVNDAPALKKADVGIAVAGATDA--ARSAADIVLTEPGLSVIVDA-ILES 589 (755)
T ss_pred EEEecCHHHHHHHHHHHHh-cCCEEEEEcCCcccHHHHHhCCeeEEecCCcHH--HHHhCCEEEEcCChHHHHHH-HHHH
Confidence 9999999999999999998 8999999999999999999999999994 6776 99999999999777 7777 8999
Q ss_pred hhhhHHhhhheEEEecc
Q 002339 917 HWCYKRIAQMVIIKDFP 933 (934)
Q Consensus 917 r~~~~~i~~~i~~~~~k 933 (934)
|..|+|+++++.|.+..
T Consensus 590 R~~~~ni~k~i~~~~~~ 606 (755)
T TIGR01647 590 RKIFQRMKSYVIYRIAE 606 (755)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999998887643
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-83 Score=724.15 Aligned_cols=717 Identities=21% Similarity=0.273 Sum_probs=517.1
Q ss_pred cCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHHHh
Q 002339 49 KRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRF 128 (934)
Q Consensus 49 ~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~r~ 128 (934)
+|+.-||.|.|..+..+.+ ..|+.+..+|+++|..+..++|.. .+++.+...++++-..+++...+|..+..
T Consensus 168 ~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~----d~Y~~YA~cI~iisv~Si~~sv~e~r~qs 239 (1140)
T KOG0208|consen 168 DRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLA----DSYYYYAFCIVIISVYSIVLSVYETRKQS 239 (1140)
T ss_pred hHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhc----ccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5677899999999999987 789999999999999999999887 56666666666777778888888887777
Q ss_pred hhhhhhcc--ceEEEEeCCCeEEEeecccCccCcEEEecc-CcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecc
Q 002339 129 MQDKEVNA--RKVSVHVGNGVFSYKPWEKIQVGDIVKVEK-DQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAM 205 (934)
Q Consensus 129 k~~~~~n~--~~~~V~~r~g~~~~i~~~~L~vGDII~l~~-ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~ 205 (934)
+..+.+-. ..|+|+ |+|.|++|.+++|+||||+.+.+ +-..|||++|++ |.|.||||+|||||.|+.|.|.
T Consensus 240 ~rlr~mv~~~~~V~V~-R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~-----g~civNEsmLTGESVPv~K~~l 313 (1140)
T KOG0208|consen 240 IRLRSMVKFTCPVTVI-RDGFWETVDSSELVPGDILYIPPPGKIMPCDALLIS-----GDCIVNESMLTGESVPVTKTPL 313 (1140)
T ss_pred HHHHHHhcCCceEEEE-ECCEEEEEeccccccccEEEECCCCeEeecceEEEe-----CcEEeecccccCCcccccccCC
Confidence 77776654 478899 89999999999999999999998 999999999999 8899999999999999999998
Q ss_pred cccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhhccC
Q 002339 206 EATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNAT 285 (934)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~~~ 285 (934)
+.-... ..-.+.+...+..+..|.||.+++-+.. -.+-+.|+|++||..|.-++..+
T Consensus 314 ~~~~~~--------~~~~~~~~~~~~rh~lfcGT~vlq~r~~---------------~g~~v~a~V~RTGF~T~KGqLVR 370 (1140)
T KOG0208|consen 314 PMGTDS--------LDSITISMSTNSRHTLFCGTKVLQARAY---------------LGGPVLAMVLRTGFSTTKGQLVR 370 (1140)
T ss_pred cccccc--------CcCeeechhhcCcceeeccceEEEeecC---------------CCCceEEEEEeccccccccHHHH
Confidence 621110 1111233334455566888877743310 01238999999999997777776
Q ss_pred CCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHh
Q 002339 286 TSPS-KRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYG 364 (934)
Q Consensus 286 ~~~~-k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~ 364 (934)
..-. |..+++-+-+- ..++.++.+++++.++...+..... + .+.-..+++++.++.
T Consensus 371 silyPkP~~fkfyrds--~~fi~~l~~ia~~gfiy~~i~l~~~-------g--------------~~~~~iiirsLDliT 427 (1140)
T KOG0208|consen 371 SILYPKPVNFKFYRDS--FKFILFLVIIALIGFIYTAIVLNLL-------G--------------VPLKTIIIRSLDLIT 427 (1140)
T ss_pred hhcCCCCcccHHHHHH--HHHHHHHHHHHHHHHHHHhHhHHHc-------C--------------CCHHHHhhhhhcEEE
Confidence 4322 22233333332 2333334444444444433321111 0 111247888999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcCeecc
Q 002339 365 YLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYG 444 (934)
Q Consensus 365 ~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~ 444 (934)
..+|++||.++++.......++ .+++|.|-+++.+...|+++.+|||||||||++.+.+-.+..-...-.
T Consensus 428 i~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~ 497 (1140)
T KOG0208|consen 428 IVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVD 497 (1140)
T ss_pred EecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecccccc
Confidence 9999999999999999888888 899999999999999999999999999999999999988875322100
Q ss_pred CCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCChhHHH
Q 002339 445 VSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLL 524 (934)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (934)
.. .+... ..+ + + . + +.-.. .-+.......
T Consensus 498 ~~-~~~~~--~~~------~----~-------------------------~--------~----~~~~l-~~~~~~~~~~ 526 (1140)
T KOG0208|consen 498 DG-PELKV--VTE------D----S-------------------------L--------Q----LFYKL-SLRSSSLPMG 526 (1140)
T ss_pred cc-chhhh--hhh------h----h-------------------------c--------c----ceeec-cccccCCchH
Confidence 00 00000 000 0 0 0 0 00000 0001111234
Q ss_pred HHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeec--------CCe---EEEEecCC---CCCCC
Q 002339 525 LFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRT--------QSS---VFIRERYP---PKGQP 590 (934)
Q Consensus 525 ~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~--------~~~---~~i~~~~~---~~~~~ 590 (934)
.|..++|.||+.....+. ..++|.|.-+.++ .|+.+.+.. .++ ..++...+ ...+.
T Consensus 527 ~~~~a~atCHSL~~v~g~-------l~GDPLdlkmfe~---t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~ 596 (1140)
T KOG0208|consen 527 NLVAAMATCHSLTLVDGT-------LVGDPLDLKMFES---TGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTEC 596 (1140)
T ss_pred HHHHHHhhhceeEEeCCe-------eccCceeeeeeec---cceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcC
Confidence 688999999988765432 2378888776653 466664421 011 11111110 01111
Q ss_pred ceeEEEEeEecCCCCCCceEEEEEEcC-CCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeC
Q 002339 591 VEREFKILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQL 669 (934)
Q Consensus 591 ~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l 669 (934)
..+.+-+++.+||+|..+||||||.++ +.+.++|+|||||.|.+.|+++. ++.++.+.++.|+.+|+|++++|+|.+
T Consensus 597 ~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~t--vP~dy~evl~~Yt~~GfRVIAlA~K~L 674 (1140)
T KOG0208|consen 597 GEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPET--VPADYQEVLKEYTHQGFRVIALASKEL 674 (1140)
T ss_pred CCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCccc--CCccHHHHHHHHHhCCeEEEEEecCcc
Confidence 123799999999999999999999986 46799999999999999999875 889999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHH
Q 002339 670 DESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (934)
Q Consensus 670 ~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~ 749 (934)
+.. .|.+..+ ..| +.+|+||+|+|++.+|++||++++.+|++|++|.|+++|+|||+..||+
T Consensus 675 ~~~---~~~~~~~-------~~R--------d~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTai 736 (1140)
T KOG0208|consen 675 ETS---TLQKAQK-------LSR--------DTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAI 736 (1140)
T ss_pred Ccc---hHHHHhh-------ccH--------hhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheee
Confidence 876 4433221 233 7889999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCcccCCceEEEEcCCCch-hHHHHHHHHHHHhHHHHHHH---HHh-hh----hccCCCCCcEEEEEcChhhhHh
Q 002339 750 NIGFACSLLRQGMKQICITALNSD-SVGKAAKEAVKDNILMQITN---ASQ-MI----KLERDPHAAYALIIEGKTLAYA 820 (934)
Q Consensus 750 ~ia~~~gi~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~-~~----~~~~~~~~~~~lvi~g~~l~~~ 820 (934)
.+|++||++.+..+++...-...+ +....+.....++ ..+... .+. .. ..+......+.+.++|+.+..+
T Consensus 737 sVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i 815 (1140)
T KOG0208|consen 737 SVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVES-QTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVI 815 (1140)
T ss_pred ehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccC-ccccCCCCccCccccCCccChhhhccceeEEEecCchhHHH
Confidence 999999999998887765544221 1000000000000 000000 000 00 0011234568999999999988
Q ss_pred hhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcE
Q 002339 821 LEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDF 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ 900 (934)
. .+..+.+.++...+. |||||+|.||.++|+.+|+ .|..|+|||||+||+.||++|||||+++.+| |.-||.|
T Consensus 816 ~-~~~~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQk-l~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApF 888 (1140)
T KOG0208|consen 816 L-EHFPELVPKILLKGT--VFARMSPDQKAELIEALQK-LGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPF 888 (1140)
T ss_pred H-hhcHHHHHHHHhcCe--EEeecCchhHHHHHHHHHh-cCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCcc
Confidence 8 455556666666555 9999999999999999998 8999999999999999999999999999888 7889999
Q ss_pred eec--CccchhhhHhhhchhhhHHhhh
Q 002339 901 SIA--QFRFLERLLVVHGHWCYKRIAQ 925 (934)
Q Consensus 901 ii~--~~~~l~~lll~~Gr~~~~~i~~ 925 (934)
.-. +.+.+..+ +.+||..+-..-.
T Consensus 889 TSk~~~I~cVp~v-IrEGRaALVTSf~ 914 (1140)
T KOG0208|consen 889 TSKTPSISCVPDV-IREGRAALVTSFA 914 (1140)
T ss_pred ccCCCchhhHhHH-HhhhhhhhhhhHH
Confidence 977 56668888 8999977654433
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-75 Score=676.12 Aligned_cols=526 Identities=17% Similarity=0.194 Sum_probs=406.9
Q ss_pred HHHHhhHHHHHHHHHHHHhccc--CCC----CCc--cccchhhHHHHH---HHHHHHHHHHHHHhhhhhhhcc---c-eE
Q 002339 75 FEQFNRVANIYFLIAALLSVTP--LSP----FSP--VSMLLPLAIVVG---VSMAKEALEDWRRFMQDKEVNA---R-KV 139 (934)
Q Consensus 75 ~~qf~~~~~~~~l~~~il~~~~--~~~----~~~--~~~~~~l~~v~~---~~~~~~~~~~~~r~k~~~~~n~---~-~~ 139 (934)
-.+|++|..+.++++++++++. +.. ..| +..+..++++++ +..+.|.+.++|..++.+.+.+ . ++
T Consensus 27 ~~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 27 VYMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 3567889999999999998864 111 011 222222222222 2333344445665555444443 3 57
Q ss_pred E-EEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCChhhhh
Q 002339 140 S-VHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFK 218 (934)
Q Consensus 140 ~-V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~ 218 (934)
+ |. |||++++|++++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.++...
T Consensus 107 ~~v~-rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~d~---------- 170 (673)
T PRK14010 107 RRIK-QDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK-----GLATVDESAITGESAPVIKESGGDF---------- 170 (673)
T ss_pred EEEE-eCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE-----cceEEecchhcCCCCceeccCCCcc----------
Confidence 6 55 89999999999999999999999999999999999 7789999999999999999987110
Q ss_pred cCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhh---hccCCCCCccchHH
Q 002339 219 EFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM---QNATTSPSKRSGIE 295 (934)
Q Consensus 219 ~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~ 295 (934)
...|+||.+.+|. +.++|+.||.+|.++ ...+.++.+++|+|
T Consensus 171 --------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e 215 (673)
T PRK14010 171 --------------DNVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNE 215 (673)
T ss_pred --------------CeeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHH
Confidence 0248999999888 999999999999654 45667777889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHH
Q 002339 296 KKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSI 375 (934)
Q Consensus 296 ~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~ 375 (934)
..+..+...+.++.+ +++.++.. +. .|. .....+...+.+++.+||++|+..+
T Consensus 216 ~~l~~l~~~l~ii~l--~~~~~~~~-~~--------~~~----------------~~~~~~~~~val~V~~IP~aL~~~~ 268 (673)
T PRK14010 216 IALFTLLMTLTIIFL--VVILTMYP-LA--------KFL----------------NFNLSIAMLIALAVCLIPTTIGGLL 268 (673)
T ss_pred HHHHHHHHHHhHHHH--HHHHHHHH-HH--------hhc----------------cHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 877666544332221 11111110 00 000 0113455666777788999999999
Q ss_pred HHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcCeeccCCchHHHHHHH
Q 002339 376 EIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAA 455 (934)
Q Consensus 376 ~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~ 455 (934)
+++...++.++ +++++++|++..+|.||.+|+||||||||||+|++.+..+.... +
T Consensus 269 ~~~~~~g~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~---~----------- 324 (673)
T PRK14010 269 SAIGIAGMDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK---S----------- 324 (673)
T ss_pred HHHHHHHHHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC---C-----------
Confidence 99988888888 89999999999999999999999999999999877766543100 0
Q ss_pred HhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCChhHHHHHHHHHhhcce
Q 002339 456 KQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535 (934)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~ 535 (934)
....+++...++|+.
T Consensus 325 -----------------------------------------------------------------~~~~~ll~~a~~~~~ 339 (673)
T PRK14010 325 -----------------------------------------------------------------SSFERLVKAAYESSI 339 (673)
T ss_pred -----------------------------------------------------------------ccHHHHHHHHHHhcC
Confidence 011234555566653
Q ss_pred eeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEE
Q 002339 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVR 615 (934)
Q Consensus 536 ~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~ 615 (934)
. +.||.+.|+++++++.|+.... .....+||++++|+|++.+.
T Consensus 340 ~--------------s~~P~~~AIv~~a~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~ 382 (673)
T PRK14010 340 A--------------DDTPEGRSIVKLAYKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT 382 (673)
T ss_pred C--------------CCChHHHHHHHHHHHcCCCchh-----------------------hhcceeccccccceeEEEEC
Confidence 2 3599999999999987653210 01123799999999998753
Q ss_pred cCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHH
Q 002339 616 DEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREAT 695 (934)
Q Consensus 616 ~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~ 695 (934)
++ .+.|||++.++++|...+...+..+.+..++++.+|+|+++++
T Consensus 383 ---g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~------------------------------ 427 (673)
T PRK14010 383 ---TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVL------------------------------ 427 (673)
T ss_pred ---CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEE------------------------------
Confidence 32 4569999999999986544445567777889999999999877
Q ss_pred HHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhH
Q 002339 696 LEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV 775 (934)
Q Consensus 696 l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~ 775 (934)
.|++++|+++++|++|++++++|++||++||+++|+|||+..||..+|+++|+..
T Consensus 428 ---------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------- 482 (673)
T PRK14010 428 ---------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------- 482 (673)
T ss_pred ---------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------
Confidence 3778999999999999999999999999999999999999999999999999952
Q ss_pred HHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHH
Q 002339 776 GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRL 855 (934)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~ 855 (934)
+++|++|+||.++|+.
T Consensus 483 ----------------------------------------------------------------v~A~~~PedK~~iV~~ 498 (673)
T PRK14010 483 ----------------------------------------------------------------FVAECKPEDKINVIRE 498 (673)
T ss_pred ----------------------------------------------------------------EEcCCCHHHHHHHHHH
Confidence 8999999999999999
Q ss_pred HhhcCCCEEEEEcCChhhHHHHHHcCccEEE-cccchhhHHHhCcEeecCccc--hhhhHhhhchhhhHHhhhheEEEec
Q 002339 856 VKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGMQAVMASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDF 932 (934)
Q Consensus 856 lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam-~~~e~~~a~~~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~ 932 (934)
+|+ .|+.|+|+|||.||+|+|++||||||| +|++. |+++||++++++++ |..+ +..||..|.|+++++.|++.
T Consensus 499 lQ~-~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~~~ 574 (673)
T PRK14010 499 EQA-KGHIVAMTGDGTNDAPALAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFSIA 574 (673)
T ss_pred HHh-CCCEEEEECCChhhHHHHHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHheeee
Confidence 998 899999999999999999999999999 57777 99999999998777 7777 89999999999999999874
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-78 Score=671.42 Aligned_cols=678 Identities=21% Similarity=0.240 Sum_probs=527.7
Q ss_pred cCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc--C-C-------CCCccccchhhHHHHHHHHH
Q 002339 49 KRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--L-S-------PFSPVSMLLPLAIVVGVSMA 118 (934)
Q Consensus 49 ~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~--~-~-------~~~~~~~~~~l~~v~~~~~~ 118 (934)
.++.+-|+|.++.+|.+.-| ..+.+|++..+.+.+++.++++++. + . ..+.+ ..+.|+.+++++.+
T Consensus 66 ~~L~rdG~NaL~Ppk~t~~w---ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly-~giiL~~vv~vtg~ 141 (1019)
T KOG0203|consen 66 EKLARDGPNALTPPKTTPEW---IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLY-LGIVLAAVVIVTGL 141 (1019)
T ss_pred hhhccCCCCCCCCCCCChHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceE-EEEEEEEEEEEEec
Confidence 56778999999999987743 6688999999999999999999865 1 1 12222 23345566666666
Q ss_pred HHHHHHHHHhhh---hhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCC
Q 002339 119 KEALEDWRRFMQ---DKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDG 195 (934)
Q Consensus 119 ~~~~~~~~r~k~---~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtG 195 (934)
...+++.+..+- .+.+-.+.|+|+ |||....+..++|+|||+|.++-|+++|||++++++.+ |+||+|+|||
T Consensus 142 ~~~~qe~ks~~im~sF~~l~P~~~~Vi-Rdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTG 216 (1019)
T KOG0203|consen 142 FSYYQEAKSSKIMDSFKNLVPQQALVI-RDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTG 216 (1019)
T ss_pred CCCccchhhHHHHHHHhccchhhheee-ecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEecccccc
Confidence 666666555543 344556899999 89999999999999999999999999999999999887 9999999999
Q ss_pred CCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEec
Q 002339 196 ETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTG 275 (934)
Q Consensus 196 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG 275 (934)
||.|..+.+......-. ......|.+|.+++|. ++|+|++||
T Consensus 217 esEP~~~~~~~t~~~~~-----------------Et~Ni~f~st~~veG~---------------------~~givi~tG 258 (1019)
T KOG0203|consen 217 ESEPQTRSPEFTHENPL-----------------ETRNIAFFSTNCVEGT---------------------GRGIVIATG 258 (1019)
T ss_pred ccCCccCCccccccCch-----------------hheeeeeeeeEEecce---------------------EEEEEEecC
Confidence 99999998754331111 1112348888888888 999999999
Q ss_pred cchhhhhccC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhH
Q 002339 276 HDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (934)
Q Consensus 276 ~~Tki~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (934)
.+|.+++... .....++|+++.+++++.++..+++++.+..|++..+..+ .|
T Consensus 259 d~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy-----~~-------------------- 313 (1019)
T KOG0203|consen 259 DRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY-----EW-------------------- 313 (1019)
T ss_pred CceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc-----hh--------------------
Confidence 9998776554 4567789999999999999998888888877766554321 23
Q ss_pred HHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceE
Q 002339 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (934)
Q Consensus 353 ~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 432 (934)
+..+.+.+.+++..+|.+|+++++....+-+.+| +++++++|++.+.|.||...+||+|||||||+|.|+
T Consensus 314 l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTqnrMt 383 (1019)
T KOG0203|consen 314 LRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMT 383 (1019)
T ss_pred HHHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEecceE
Confidence 3455568889999999999999999999999999 899999999999999999999999999999999999
Q ss_pred EEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCcccccccccc
Q 002339 433 FLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDG 512 (934)
Q Consensus 433 ~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (934)
|.++|.++.....+.++.. ++.
T Consensus 384 Vahlw~d~~i~~~d~~~~~------------------------------------------------~~~---------- 405 (1019)
T KOG0203|consen 384 VAHLWFDNQIHEADTTEDQ------------------------------------------------SGQ---------- 405 (1019)
T ss_pred EEeeccCCceeeeechhhh------------------------------------------------hcc----------
Confidence 9999987765432221100 000
Q ss_pred CCCCCCChhHHHHHHHHHhhcceeeecccCCCCc--eEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCC
Q 002339 513 NWLKEPNVDTLLLFFRILAICHTAIPELNEETGN--LTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590 (934)
Q Consensus 513 ~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~--~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 590 (934)
.....+.....+.++..+||.+.....+.+-. -.-..+++.|.||++++.-.-... ..
T Consensus 406 --~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~------------------~~ 465 (1019)
T KOG0203|consen 406 --SFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV------------------ME 465 (1019)
T ss_pred --cccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH------------------HH
Confidence 00112346678999999999998875443221 122359999999999987432111 11
Q ss_pred ceeEEEEeEecCCCCCCceEEEEEEcCC---CcEEEEEcccchhhhHhhhc---------cccccHHHHHHHHHHHHhcC
Q 002339 591 VEREFKILNLLDFTSKRKRMSVIVRDED---GQILLLCKGADSIIFDRLSK---------NGRMYEEATTKLLNEYGEAG 658 (934)
Q Consensus 591 ~~~~~~il~~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~G 658 (934)
.++.++.+..+||+|.+|.+-.+.+..+ .+..+..|||||.++++|+. .++...+.+.+...++...|
T Consensus 466 ~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~G 545 (1019)
T KOG0203|consen 466 LRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLG 545 (1019)
T ss_pred HHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcc
Confidence 3577888999999999999999998754 57999999999999999986 12235667788888999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEE
Q 002339 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (934)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ 738 (934)
-||+.||++.++++++.+.-.-.-... +.--.+|.|+|++++-||+|..+|+++..||.|||||+
T Consensus 546 erVlgF~~~~l~~~~~p~~~~f~~d~~---------------n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvi 610 (1019)
T KOG0203|consen 546 ERVLGFCDLELPDEKFPRGFQFDTDDV---------------NFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVI 610 (1019)
T ss_pred hHHHHHHHHhcchhcCCCceEeecCCC---------------CCcchhccccchhhccCCCcccCchhhhhhhhhCceEE
Confidence 999999999999876654321110000 11125899999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhh
Q 002339 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (934)
Q Consensus 739 mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 818 (934)
|+|||++.||.++|++.||+....++.. ++... ........++....+.++.|.++.
T Consensus 611 mVTgdhpiTAkAiA~~vgIi~~~~et~e-------------------~~a~r----~~~~v~~vn~~~a~a~VihG~eL~ 667 (1019)
T KOG0203|consen 611 MVTGDHPITAKAIAKSVGIISEGSETVE-------------------DIAKR----LNIPVEQVNSRDAKAAVIHGSELP 667 (1019)
T ss_pred EEecCccchhhhhhhheeeecCCchhhh-------------------hhHHh----cCCcccccCccccceEEEeccccc
Confidence 9999999999999999999876543211 00000 000011112233578899999998
Q ss_pred HhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEE--cccchhhHHH
Q 002339 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI--SGVEGMQAVM 896 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam--~~~e~~~a~~ 896 (934)
.+.++++.+ +.......||||.+|+||..||+..|+ .|.+|+.+|||.||.|||+.||||||| +|++. +|+
T Consensus 668 ~~~~~qld~----il~nh~eIVFARTSPqQKLiIVe~cQr-~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKq 740 (1019)
T KOG0203|consen 668 DMSSEQLDE----LLQNHQEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQ 740 (1019)
T ss_pred ccCHHHHHH----HHHhCCceEEEecCccceEEeEhhhhh-cCcEEEEeCCCcCCChhhcccccceeeccccchH--HHh
Confidence 776655443 344455679999999999999999998 899999999999999999999999999 58888 999
Q ss_pred hCcEeecCccc--hhhhHhhhchhhhHHhhhheEEEec
Q 002339 897 ASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDF 932 (934)
Q Consensus 897 ~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~ 932 (934)
+||+||++++| ++.- +.+||.+|.|++|.|.|.+-
T Consensus 741 AADmILLDDNFASIVtG-VEEGRLiFDNLKKsIAYTLT 777 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLT 777 (1019)
T ss_pred hcceEEecCcchhheee-cccceehhhhHHHHHHHHHH
Confidence 99999999888 5555 89999999999999998764
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-75 Score=673.72 Aligned_cols=520 Identities=20% Similarity=0.193 Sum_probs=416.0
Q ss_pred HHHHHHhhHHHHHHHHHHHHhccc-CCC------CCccccc---hhhHHHHHHHHHHHHHHHHHHhhhhhhhcc----ce
Q 002339 73 ALFEQFNRVANIYFLIAALLSVTP-LSP------FSPVSML---LPLAIVVGVSMAKEALEDWRRFMQDKEVNA----RK 138 (934)
Q Consensus 73 ~l~~qf~~~~~~~~l~~~il~~~~-~~~------~~~~~~~---~~l~~v~~~~~~~~~~~~~~r~k~~~~~n~----~~ 138 (934)
.--.||++|..+.++++++++++. +.+ ..+...+ +.+++.+++..+.+.+.++|..++.+.+.+ .+
T Consensus 26 ~~~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~ 105 (679)
T PRK01122 26 DPRVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTF 105 (679)
T ss_pred CHHHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence 345688999999999999999864 111 1222222 233444455556667777777766555543 36
Q ss_pred EEEEeCCCe-EEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCChhhh
Q 002339 139 VSVHVGNGV-FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAF 217 (934)
Q Consensus 139 ~~V~~r~g~-~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~ 217 (934)
++|+ |+|+ +++|++++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.+++..
T Consensus 106 a~vi-r~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie-----G~a~VDESaLTGES~PV~K~~G~~~--------- 170 (679)
T PRK01122 106 ARKL-REPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE-----GVASVDESAITGESAPVIRESGGDF--------- 170 (679)
T ss_pred EEEE-ECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE-----ccEEEEcccccCCCCceEeCCCCcc---------
Confidence 9999 7777 9999999999999999999999999999999 7799999999999999999987431
Q ss_pred hcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhh---ccCCCCCccchH
Q 002339 218 KEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGI 294 (934)
Q Consensus 218 ~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l 294 (934)
...|+||.+++|. +.+.|+.+|.+|.+++ ..+.++..++|+
T Consensus 171 ---------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~ 214 (679)
T PRK01122 171 ---------------SSVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPN 214 (679)
T ss_pred ---------------CeEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHH
Confidence 1248999999888 9999999999996544 556777778999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHH
Q 002339 295 EKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVS 374 (934)
Q Consensus 295 ~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~ 374 (934)
|..++.+...++++.++++++.+.+ .||... -..+...+.+++.+|||+|+..
T Consensus 215 e~al~~l~~~l~~i~l~~~~~~~~~-----------~~~~g~----------------~~~l~~~iallV~aiP~alg~l 267 (679)
T PRK01122 215 EIALTILLAGLTIIFLLVVATLPPF-----------AAYSGG----------------ALSITVLVALLVCLIPTTIGGL 267 (679)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHH-----------HHHhCc----------------hHHHHHHHHHHHHcccchhhhH
Confidence 9988887766654444333332222 122100 1256677888999999999998
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcCeeccCCchHHHHHH
Q 002339 375 IEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAA 454 (934)
Q Consensus 375 ~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~ 454 (934)
++++...++.++ .++++++|++..+|.||++|+||||||||||+|+|.+..++..+. .
T Consensus 268 ~~~i~i~g~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~------- 325 (679)
T PRK01122 268 LSAIGIAGMDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG-----V------- 325 (679)
T ss_pred HHHHHHHHHHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC-----C-------
Confidence 888888888888 899999999999999999999999999999999999988753110 0
Q ss_pred HHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCChhHHHHHHHHHhhcc
Q 002339 455 AKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICH 534 (934)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~ 534 (934)
..++++.+.++|+
T Consensus 326 -------------------------------------------------------------------~~~~ll~~a~~~s 338 (679)
T PRK01122 326 -------------------------------------------------------------------TEEELADAAQLSS 338 (679)
T ss_pred -------------------------------------------------------------------CHHHHHHHHHHhc
Confidence 0013455556664
Q ss_pred eeeecccCCCCceEEecCChhHHHHHHHHHH-CCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEE
Q 002339 535 TAIPELNEETGNLTYEAESPDEAAFLVAARE-FGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVI 613 (934)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~-~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 613 (934)
.. +.||.+.||+++++. .++... ...++..+.+||++.+++|++.
T Consensus 339 ~~--------------s~hP~~~AIv~~a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~ 384 (679)
T PRK01122 339 LA--------------DETPEGRSIVVLAKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVD 384 (679)
T ss_pred CC--------------CCCchHHHHHHHHHhhcCCCch--------------------hhccccceeEeecCcCceEEEE
Confidence 33 358999999999986 343210 1124456678999999888876
Q ss_pred EEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHH
Q 002339 614 VRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADRE 693 (934)
Q Consensus 614 v~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~ 693 (934)
+. | ..|.|||++.|++.|...+.+.++.+.+..++++.+|+|++++|+
T Consensus 385 ~~---g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~--------------------------- 432 (679)
T PRK01122 385 LD---G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAE--------------------------- 432 (679)
T ss_pred EC---C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEE---------------------------
Confidence 53 3 579999999999999776555677888889999999999999994
Q ss_pred HHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCch
Q 002339 694 ATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD 773 (934)
Q Consensus 694 ~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~ 773 (934)
|++++|+++++|++|++++++|++||++||+++|+|||++.||..+|+++|+.+
T Consensus 433 ------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~-------------- 486 (679)
T PRK01122 433 ------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-------------- 486 (679)
T ss_pred ------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE--------------
Confidence 678999999999999999999999999999999999999999999999999942
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHH
Q 002339 774 SVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVT 853 (934)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv 853 (934)
+++|++|+||.++|
T Consensus 487 ------------------------------------------------------------------v~A~~~PedK~~iV 500 (679)
T PRK01122 487 ------------------------------------------------------------------FLAEATPEDKLALI 500 (679)
T ss_pred ------------------------------------------------------------------EEccCCHHHHHHHH
Confidence 89999999999999
Q ss_pred HHHhhcCCCEEEEEcCChhhHHHHHHcCccEEE-cccchhhHHHhCcEeecCccc--hhhhHhhhchhhhH
Q 002339 854 RLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGMQAVMASDFSIAQFRF--LERLLVVHGHWCYK 921 (934)
Q Consensus 854 ~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam-~~~e~~~a~~~AD~ii~~~~~--l~~lll~~Gr~~~~ 921 (934)
+.+|+ .|+.|+|+|||.||+|||++||||||| +|++. |+++||++++++++ |..+ +..||+..-
T Consensus 501 ~~lQ~-~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~a-v~~GR~~~~ 567 (679)
T PRK01122 501 RQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIEV-VEIGKQLLM 567 (679)
T ss_pred HHHHH-cCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHH-HHHHHHHHh
Confidence 99998 899999999999999999999999999 57777 99999999998777 7777 899998874
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-71 Score=645.10 Aligned_cols=533 Identities=18% Similarity=0.219 Sum_probs=420.9
Q ss_pred HHHHHHhhHHHHHHHHHHHHhccc-CCC-------C--Cccccc--hhhHHHHHHHHHHHHHHHHHHhhhhhhhcc---c
Q 002339 73 ALFEQFNRVANIYFLIAALLSVTP-LSP-------F--SPVSML--LPLAIVVGVSMAKEALEDWRRFMQDKEVNA---R 137 (934)
Q Consensus 73 ~l~~qf~~~~~~~~l~~~il~~~~-~~~-------~--~~~~~~--~~l~~v~~~~~~~~~~~~~~r~k~~~~~n~---~ 137 (934)
.--.||++|..+.++++++++++. +.+ . .|+... +.+++.+++..+.+.+.+++..++.+.+.+ .
T Consensus 25 ~~~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~ 104 (675)
T TIGR01497 25 NPKAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKT 104 (675)
T ss_pred CHHHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 334678999999999999988764 210 1 244322 223344556666777888887777666654 3
Q ss_pred -eEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCChhh
Q 002339 138 -KVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEA 216 (934)
Q Consensus 138 -~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~ 216 (934)
.++|+++||++++|+.++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.+++..
T Consensus 105 ~~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~~~-------- 171 (675)
T TIGR01497 105 TFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE-----GVASVDESAITGESAPVIKESGGDF-------- 171 (675)
T ss_pred ceEEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ccEEEEcccccCCCCceeecCCCCc--------
Confidence 47787458999999999999999999999999999999999 7799999999999999999987532
Q ss_pred hhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhh---hccCCCCCccch
Q 002339 217 FKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM---QNATTSPSKRSG 293 (934)
Q Consensus 217 ~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~ 293 (934)
...|+||.+.+|. +.+.|+.+|.+|.++ ...+.++.+++|
T Consensus 172 ----------------~~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktp 214 (675)
T TIGR01497 172 ----------------ASVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTP 214 (675)
T ss_pred ----------------ceeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCCh
Confidence 0148898888887 999999999999554 455677777899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHH
Q 002339 294 IEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYV 373 (934)
Q Consensus 294 l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v 373 (934)
+|..++.+..++.++.++++++.. .+..|.. ....+...+.+++.+|||+|+.
T Consensus 215 lq~~l~~l~~~l~~v~li~~~~~~-~~~~~~~--------------------------~~~~~~~lvallV~aiP~aLg~ 267 (675)
T TIGR01497 215 NEIALTILLIALTLVFLLVTATLW-PFAAYGG--------------------------NAISVTVLVALLVCLIPTTIGG 267 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcC--------------------------hhHHHHHHHHHHHHhCchhhhh
Confidence 999888876655433333222111 1110100 0124555688899999998877
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcCeeccCCchHHHHH
Q 002339 374 SIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELA 453 (934)
Q Consensus 374 ~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~ 453 (934)
.++.+...++.++ .+.++++|++..+|.||++|+||||||||||+|+|++..++..+. .
T Consensus 268 l~~av~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~------ 326 (675)
T TIGR01497 268 LLSAIGIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG-----V------ 326 (675)
T ss_pred HHHHHHHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC-----C------
Confidence 7777766777777 889999999999999999999999999999999999998763110 0
Q ss_pred HHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCChhHHHHHHHHHhhc
Q 002339 454 AAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAIC 533 (934)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC 533 (934)
...+++...++|
T Consensus 327 --------------------------------------------------------------------~~~~ll~~aa~~ 338 (675)
T TIGR01497 327 --------------------------------------------------------------------DEKTLADAAQLA 338 (675)
T ss_pred --------------------------------------------------------------------cHHHHHHHHHHh
Confidence 011345555666
Q ss_pred ceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEE
Q 002339 534 HTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVI 613 (934)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 613 (934)
+.. +.||.+.|++++|++.|..... ..++..+..||++.+++|++.
T Consensus 339 ~~~--------------s~hP~a~Aiv~~a~~~~~~~~~--------------------~~~~~~~~~pf~~~~~~sg~~ 384 (675)
T TIGR01497 339 SLA--------------DDTPEGKSIVILAKQLGIREDD--------------------VQSLHATFVEFTAQTRMSGIN 384 (675)
T ss_pred cCC--------------CCCcHHHHHHHHHHHcCCCccc--------------------cccccceEEEEcCCCcEEEEE
Confidence 432 3689999999999987653211 112345678999998777765
Q ss_pred EEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHH
Q 002339 614 VRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADRE 693 (934)
Q Consensus 614 v~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~ 693 (934)
+. +| ..|.||+++.+++.|...+...+..+.+.+++++.+|+|++++|+
T Consensus 385 ~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~--------------------------- 433 (675)
T TIGR01497 385 LD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE--------------------------- 433 (675)
T ss_pred Ee--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEE---------------------------
Confidence 54 33 579999999999988765555667788889999999999999995
Q ss_pred HHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCch
Q 002339 694 ATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD 773 (934)
Q Consensus 694 ~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~ 773 (934)
|.+++|+++++|++||+++++|++|+++||+++|+|||+..+|..+|+++|+.+
T Consensus 434 ------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~-------------- 487 (675)
T TIGR01497 434 ------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD-------------- 487 (675)
T ss_pred ------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE--------------
Confidence 457999999999999999999999999999999999999999999999999942
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHH
Q 002339 774 SVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVT 853 (934)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv 853 (934)
+++|++|++|..+|
T Consensus 488 ------------------------------------------------------------------v~a~~~PedK~~~v 501 (675)
T TIGR01497 488 ------------------------------------------------------------------FIAEATPEDKIALI 501 (675)
T ss_pred ------------------------------------------------------------------EEcCCCHHHHHHHH
Confidence 78999999999999
Q ss_pred HHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcEeecCccc--hhhhHhhhchhhhHHhhhheEEE
Q 002339 854 RLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIK 930 (934)
Q Consensus 854 ~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~ 930 (934)
+.+++ .|+.|+|+|||.||+|||+.|||||+|+ |++. ++++||++++++++ |..+ +.+||..+-....+-.|+
T Consensus 502 ~~lq~-~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~--akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~ 577 (675)
T TIGR01497 502 RQEQA-EGKLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFS 577 (675)
T ss_pred HHHHH-cCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheee
Confidence 99998 7899999999999999999999999995 5666 99999999999777 7777 899999998888887777
Q ss_pred ec
Q 002339 931 DF 932 (934)
Q Consensus 931 ~~ 932 (934)
+.
T Consensus 578 ~~ 579 (675)
T TIGR01497 578 IA 579 (675)
T ss_pred ec
Confidence 53
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-71 Score=609.40 Aligned_cols=639 Identities=21% Similarity=0.274 Sum_probs=456.5
Q ss_pred CCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHHHhhhhh
Q 002339 53 KYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDK 132 (934)
Q Consensus 53 ~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~r~k~~~ 132 (934)
+||+|......+++- ..|.|.-..|+..|..+...||+.- ..||.+++.|++++.+ |+---++|.+...
T Consensus 175 ~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD---eyWYySlFtLfMli~f----E~tlV~Qrm~~ls 243 (1160)
T KOG0209|consen 175 KYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLIAF----EATLVKQRMRTLS 243 (1160)
T ss_pred HhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH---HHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence 499999999999986 6788888999999999999999974 5677777777665544 3333455555443
Q ss_pred ---hhc--cceEEEEeCCCeEEEeecccCccCcEEEecc---CcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeec
Q 002339 133 ---EVN--ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEK---DQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRA 204 (934)
Q Consensus 133 ---~~n--~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~---ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~ 204 (934)
.+. +..+.|+ |+++|+.+..++|.|||+|.|.. ...+|||++||. |.|.|||++|||||.|..|.+
T Consensus 244 e~R~Mg~kpy~I~v~-R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~-----GsciVnEaMLtGESvPl~KE~ 317 (1160)
T KOG0209|consen 244 EFRTMGNKPYTINVY-RNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLR-----GSCIVNEAMLTGESVPLMKES 317 (1160)
T ss_pred HHHhcCCCceEEEEE-ecCcceeccccccCCCceEEeccCcccCcCCceEEEEe-----cceeechhhhcCCCccccccc
Confidence 333 3667889 89999999999999999999987 678999999999 889999999999999999999
Q ss_pred ccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeec-CCeEEEEEEEeccchhhhhc
Q 002339 205 MEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN-TAHVYGSVIFTGHDSKVMQN 283 (934)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n-t~~~~gvVv~tG~~Tki~~~ 283 (934)
..... . ...++.+..++....|.||.+++-... .-+.++- .+-++|.|++||.+|..+..
T Consensus 318 Ie~~~----~------d~~ld~~~d~k~hVlfGGTkivQht~p---------~~~slk~pDggc~a~VlrTGFeTSQGkL 378 (1160)
T KOG0209|consen 318 IELRD----S------DDILDIDRDDKLHVLFGGTKIVQHTPP---------KKASLKTPDGGCVAYVLRTGFETSQGKL 378 (1160)
T ss_pred cccCC----h------hhhcccccccceEEEEcCceEEEecCC---------ccccccCCCCCeEEEEEeccccccCCce
Confidence 86552 1 112333344455667888877732100 0111111 24489999999999977666
Q ss_pred cCCC---CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeccc--CCCccccCCCCCccccCCCCCchhHHHHHHH
Q 002339 284 ATTS---PSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQ--TPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358 (934)
Q Consensus 284 ~~~~---~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (934)
.+.. ..+-+. =|+-..+++++++++|++++ +++|.... .+..-| ..|+-
T Consensus 379 vRtilf~aervTa----Nn~Etf~FILFLlVFAiaAa--~Yvwv~Gskd~~RsrY--------------------KL~Le 432 (1160)
T KOG0209|consen 379 VRTILFSAERVTA----NNRETFIFILFLLVFAIAAA--GYVWVEGSKDPTRSRY--------------------KLFLE 432 (1160)
T ss_pred eeeEEecceeeee----ccHHHHHHHHHHHHHHHHhh--heEEEecccCcchhhh--------------------heeee
Confidence 6532 111111 13334444555555665543 33443221 111111 34566
Q ss_pred HHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEE
Q 002339 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSV 438 (934)
Q Consensus 359 ~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i 438 (934)
+..++.+.+|.-||+-++++--.+...+ ++.++.|..+-.+.-.|+||..|||||||||+..|.|.++.-
T Consensus 433 C~LIlTSVvPpELPmELSmAVNsSL~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag 502 (1160)
T KOG0209|consen 433 CTLILTSVVPPELPMELSMAVNSSLIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAG 502 (1160)
T ss_pred eeEEEeccCCCCCchhhhHHHHHHHHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEEeccc
Confidence 8888999999999998777765555555 788999999999999999999999999999999999998742
Q ss_pred cCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCC
Q 002339 439 AGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEP 518 (934)
Q Consensus 439 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (934)
....-+. . .+
T Consensus 503 ~~~~~~~-~---------------------------------------------------------------------~~ 512 (1160)
T KOG0209|consen 503 LSADEGA-L---------------------------------------------------------------------TP 512 (1160)
T ss_pred ccCCccc-c---------------------------------------------------------------------cc
Confidence 1110000 0 00
Q ss_pred ChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEe
Q 002339 519 NVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598 (934)
Q Consensus 519 ~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il 598 (934)
-.+.-.+-+..+|.||+.....++ ..|+|.|+|.+++ .||.+...+. . .+..|+ ....++.
T Consensus 513 ~s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~~--v-----~p~~~~--~~~lkI~ 573 (1160)
T KOG0209|consen 513 ASKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKNS--V-----CPREGN--GKKLKII 573 (1160)
T ss_pred hhhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCcc--c-----CCCcCC--Ccccchh
Confidence 001111456799999999776543 3599999999975 5666644221 1 111121 3468889
Q ss_pred EecCCCCCCceEEEEEEcCC----CcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHH
Q 002339 599 NLLDFTSKRKRMSVIVRDED----GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEY 674 (934)
Q Consensus 599 ~~~~F~s~rkrmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~ 674 (934)
+.+.|+|..|||||++.... -++++.+|||||.|..++.. .+..+.+...+|+.+|.|||+++||.+..---
T Consensus 574 ~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~ 649 (1160)
T KOG0209|consen 574 QRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMV 649 (1160)
T ss_pred hhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----CchhHHHHHHHHhhccceEEEEecccccccch
Confidence 99999999999999998642 36999999999999999885 67788889999999999999999999873211
Q ss_pred HHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH
Q 002339 675 SAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (934)
Q Consensus 675 ~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 754 (934)
++ .| +.-.+.+|+||+|.|++.|.-|+|++++++|+.|++++++++|+|||++.||.++|++
T Consensus 650 ~q--------------~r----d~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~ 711 (1160)
T KOG0209|consen 650 SQ--------------VR----DLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKE 711 (1160)
T ss_pred hh--------------hh----hhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehhe
Confidence 11 11 1223788999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccC---CCCCcEEEEEcChhhhHhhhHHH-HHHHH
Q 002339 755 CSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLER---DPHAAYALIIEGKTLAYALEDDM-KHHFL 830 (934)
Q Consensus 755 ~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~lvi~g~~l~~~~~~~~-~~~~~ 830 (934)
+|+......++...+..... + +.+..-++ +..-.++... .-...+.+.++|..++.+...+. ...+.
T Consensus 712 v~iv~k~~~vl~~~~~~~~~-~--~~w~s~d~------t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~ 782 (1160)
T KOG0209|consen 712 VGIVEKPTLVLDLPEEGDGN-Q--LEWVSVDG------TIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIP 782 (1160)
T ss_pred eeeeccCceeeccCccCCCc-e--eeEecCCC------ceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhh
Confidence 99997765555444332110 0 00000000 0000000000 01234567899999998877652 22222
Q ss_pred hhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEE-cccc
Q 002339 831 GLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVE 890 (934)
Q Consensus 831 ~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam-~~~e 890 (934)
. ..||||+.|.||..++..+|+ .|+.|+|||||.||++||++||||||+ ++.+
T Consensus 783 h------v~VfARvaP~QKE~ii~tlK~-~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 783 H------VWVFARVAPKQKEFIITTLKK-LGYVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred h------eeEEEeeChhhHHHHHHHHHh-cCeEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 2 449999999999999999998 999999999999999999999999998 5554
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-66 Score=606.26 Aligned_cols=465 Identities=32% Similarity=0.453 Sum_probs=390.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCc
Q 002339 105 MLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (934)
Q Consensus 105 ~~~~l~~v~~~~~~~~~~~~~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G 184 (934)
.++++++.++-...+...++..+...+..+++++++|+ |+| ++.|++++|+|||+|.|++||.|||||+|++ |
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~-r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~-----g 75 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVL-RNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS-----G 75 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEE-ECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE-----c
Confidence 34555555555556666666666666666888999999 788 9999999999999999999999999999999 7
Q ss_pred eEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecC
Q 002339 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (934)
Q Consensus 185 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 264 (934)
.+.||||+|||||.|+.|++++.. |+|+.+.+|.
T Consensus 76 ~~~vdes~LTGEs~pv~k~~g~~v---------------------------~~gs~~~~G~------------------- 109 (499)
T TIGR01494 76 SCFVDESNLTGESVPVLKTAGDAV---------------------------FAGTYVFNGT------------------- 109 (499)
T ss_pred cEEEEcccccCCCCCeeeccCCcc---------------------------ccCcEEeccE-------------------
Confidence 799999999999999999997665 8899999998
Q ss_pred CeEEEEEEEeccchh---hhhccCCCCCccchHHHHHHHHH-HHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCc
Q 002339 265 AHVYGSVIFTGHDSK---VMQNATTSPSKRSGIEKKMDKII-FILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (934)
Q Consensus 265 ~~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~l~~~~~~~~-~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 340 (934)
+...|..+|.+|. +..........++++++..+++. .+++++.++++++.+++|..+... .
T Consensus 110 --~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~----~--------- 174 (499)
T TIGR01494 110 --LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWD----P--------- 174 (499)
T ss_pred --EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----c---------
Confidence 8889999999984 44444455555799999999998 777777777777776665432100 0
Q ss_pred cccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEe
Q 002339 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (934)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~ 420 (934)
. .+...+.+++.+++.+|||+|+++++++...+...+ .++++++|+++.+|+||+++++||
T Consensus 175 ------~---~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v~~i~f 235 (499)
T TIGR01494 175 ------N---SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKVDYICS 235 (499)
T ss_pred ------c---cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCCcEEEe
Confidence 0 124688999999999999999999999999998888 788999999999999999999999
Q ss_pred cCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccC
Q 002339 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (934)
Q Consensus 421 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (934)
|||||||+|+|+|.++++.+.
T Consensus 236 DKTGTLT~~~~~v~~~~~~~~----------------------------------------------------------- 256 (499)
T TIGR01494 236 DKTGTLTKNEMSFKKVSVLGG----------------------------------------------------------- 256 (499)
T ss_pred eCCCccccCceEEEEEEecCC-----------------------------------------------------------
Confidence 999999999999999864321
Q ss_pred CCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEE
Q 002339 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580 (934)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i 580 (934)
++.++||+|.|++++++..+
T Consensus 257 -----------------------------------------------~~~s~hp~~~ai~~~~~~~~------------- 276 (499)
T TIGR01494 257 -----------------------------------------------EYLSGHPDERALVKSAKWKI------------- 276 (499)
T ss_pred -----------------------------------------------CcCCCChHHHHHHHHhhhcC-------------
Confidence 01247999999999886411
Q ss_pred EecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCe
Q 002339 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLR 660 (934)
Q Consensus 581 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr 660 (934)
+...||++.+++|+++++.+++ .|+||+++.+.+.|.. +.+.++.++.+|+|
T Consensus 277 -----------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g~~ 328 (499)
T TIGR01494 277 -----------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSGLR 328 (499)
T ss_pred -----------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCCCE
Confidence 1356999999999999986433 4789999999988752 23455578889999
Q ss_pred EEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEE
Q 002339 661 TLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740 (934)
Q Consensus 661 ~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ml 740 (934)
++++|++ -+++|+++++|++|++++++|+.|+++|+++||+
T Consensus 329 ~~~~a~~---------------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~l 369 (499)
T TIGR01494 329 VLAVASK---------------------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIML 369 (499)
T ss_pred EEEEEEC---------------------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEE
Confidence 9999963 2699999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHh
Q 002339 741 TGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYA 820 (934)
Q Consensus 741 TGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~ 820 (934)
|||+..+|..+|+++|+
T Consensus 370 tGD~~~~a~~ia~~lgi--------------------------------------------------------------- 386 (499)
T TIGR01494 370 TGDNVLTAKAIAKELGI--------------------------------------------------------------- 386 (499)
T ss_pred cCCCHHHHHHHHHHcCc---------------------------------------------------------------
Confidence 99999999999999875
Q ss_pred hhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcE
Q 002339 821 LEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDF 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ 900 (934)
+++++|++|.++|+.+++ .|+.|+|+|||.||++||+.|||||+|+ |+++||+
T Consensus 387 --------------------~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adi 439 (499)
T TIGR01494 387 --------------------FARVTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADI 439 (499)
T ss_pred --------------------eeccCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCe
Confidence 356899999999999997 7899999999999999999999999995 6889999
Q ss_pred eecCccc--hhhhHhhhchhhhHHhhhheEEEecc
Q 002339 901 SIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDFP 933 (934)
Q Consensus 901 ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~k 933 (934)
+|.+++. +..+ +.+||+.++++++++.|.++.
T Consensus 440 vl~~~~l~~i~~~-~~~~r~~~~~i~~~~~~~~~~ 473 (499)
T TIGR01494 440 VLLDDNLSTIVDA-LKEGRKTFSTIKSNIFWAIAY 473 (499)
T ss_pred EEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 9998655 4555 999999999999999987764
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-66 Score=599.63 Aligned_cols=482 Identities=22% Similarity=0.276 Sum_probs=394.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhh------ccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecC
Q 002339 108 PLAIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSY 181 (934)
Q Consensus 108 ~l~~v~~~~~~~~~~~~~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~ 181 (934)
.-++++++..+.+++|++-+.++.+.+ .+++++++++||++++|+.++|+|||+|.|++||.||+||+|++
T Consensus 176 ~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~--- 252 (713)
T COG2217 176 EAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS--- 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe---
Confidence 344566666778889998888865433 45888888566779999999999999999999999999999999
Q ss_pred CCceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEe
Q 002339 182 EDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKL 261 (934)
Q Consensus 182 ~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l 261 (934)
|...||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 253 --G~s~vDeS~iTGEs~PV~k~~Gd~V---------------------------~aGtiN~~G~---------------- 287 (713)
T COG2217 253 --GSSSVDESMLTGESLPVEKKPGDEV---------------------------FAGTVNLDGS---------------- 287 (713)
T ss_pred --CcEEeecchhhCCCCCEecCCCCEE---------------------------eeeEEECCcc----------------
Confidence 8899999999999999999999988 9999999999
Q ss_pred ecCCeEEEEEEEeccchh---hhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCC
Q 002339 262 RNTAHVYGSVIFTGHDSK---VMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKE 338 (934)
Q Consensus 262 ~nt~~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~ 338 (934)
+...|..+|.||. +.+..++++..|+|+|+..|++..++.+..++++++++++|.++... .|
T Consensus 288 -----l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~----~~------ 352 (713)
T COG2217 288 -----LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG----DW------ 352 (713)
T ss_pred -----EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC----cH------
Confidence 9999999999995 45566789999999999999999999999999999988876543320 12
Q ss_pred CccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEE
Q 002339 339 TDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTI 418 (934)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i 418 (934)
...+.+++.+++.+|||+|.++++++.+.+.... ++.|+++|+...+|.|+++|+|
T Consensus 353 --------------~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l~~v~tv 408 (713)
T COG2217 353 --------------ETALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERLAKVDTV 408 (713)
T ss_pred --------------HHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhhccCCEE
Confidence 2478899999999999999999999999999988 8999999999999999999999
Q ss_pred EecCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccc
Q 002339 419 LSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRR 498 (934)
Q Consensus 419 ~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (934)
+||||||||+|+|.+..+...+. +.+
T Consensus 409 vFDKTGTLT~G~p~v~~v~~~~~----~e~-------------------------------------------------- 434 (713)
T COG2217 409 VFDKTGTLTEGKPEVTDVVALDG----DED-------------------------------------------------- 434 (713)
T ss_pred EEeCCCCCcCCceEEEEEecCCC----CHH--------------------------------------------------
Confidence 99999999999999999864322 111
Q ss_pred cCCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeE
Q 002339 499 IKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSV 578 (934)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~ 578 (934)
+++...+ ..+..++||...|++++|+..|..-...
T Consensus 435 --------------------------~~L~laA--------------alE~~S~HPiA~AIv~~a~~~~~~~~~~----- 469 (713)
T COG2217 435 --------------------------ELLALAA--------------ALEQHSEHPLAKAIVKAAAERGLPDVED----- 469 (713)
T ss_pred --------------------------HHHHHHH--------------HHHhcCCChHHHHHHHHHHhcCCCCccc-----
Confidence 1111111 1123368999999999998876211110
Q ss_pred EEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcC
Q 002339 579 FIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658 (934)
Q Consensus 579 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 658 (934)
+++. .|++ ....+ +| ..+.-|.+.-+.+.-. .... .....+.+..+|
T Consensus 470 -~~~i---~G~G-------------------v~~~v---~g--~~v~vG~~~~~~~~~~----~~~~-~~~~~~~~~~~G 516 (713)
T COG2217 470 -FEEI---PGRG-------------------VEAEV---DG--ERVLVGNARLLGEEGI----DLPL-LSERIEALESEG 516 (713)
T ss_pred -eeee---ccCc-------------------EEEEE---CC--EEEEEcCHHHHhhcCC----Cccc-hhhhHHHHHhcC
Confidence 1000 0111 11111 23 3445577765533211 1111 456677888899
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEE
Q 002339 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (934)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ 738 (934)
..++.++. |.+++|+++++|++|++++++|++|++.|+++.
T Consensus 517 ~t~v~va~---------------------------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~ 557 (713)
T COG2217 517 KTVVFVAV---------------------------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVV 557 (713)
T ss_pred CeEEEEEE---------------------------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEE
Confidence 99888884 668999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhh
Q 002339 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (934)
Q Consensus 739 mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 818 (934)
|+|||+..+|..+|+++||..
T Consensus 558 mLTGDn~~~A~~iA~~lGId~----------------------------------------------------------- 578 (713)
T COG2217 558 MLTGDNRRTAEAIAKELGIDE----------------------------------------------------------- 578 (713)
T ss_pred EEcCCCHHHHHHHHHHcChHh-----------------------------------------------------------
Confidence 999999999999999999943
Q ss_pred HhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHh
Q 002339 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMA 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~ 897 (934)
+.+.+.|++|.++|+.+|+ .|+.|+|+|||.||+|+|..|||||||+ |+|. |+++
T Consensus 579 ---------------------v~AellPedK~~~V~~l~~-~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~ea 634 (713)
T COG2217 579 ---------------------VRAELLPEDKAEIVRELQA-EGRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEA 634 (713)
T ss_pred ---------------------heccCCcHHHHHHHHHHHh-cCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHh
Confidence 8889999999999999997 8999999999999999999999999995 7888 9999
Q ss_pred CcEeecCccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 898 SDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 898 AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
||++|++.+. +..+ +..+|..++++++++.|.|
T Consensus 635 ADvvL~~~dL~~v~~a-i~lsr~t~~~IkqNl~~A~ 669 (713)
T COG2217 635 ADVVLMRDDLSAVPEA-IDLSRATRRIIKQNLFWAF 669 (713)
T ss_pred CCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999998666 6666 8999999999999998875
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-65 Score=550.52 Aligned_cols=600 Identities=20% Similarity=0.232 Sum_probs=459.3
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc----CCCCCccccchhhHHHHHHHHHHHHH
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP----LSPFSPVSMLLPLAIVVGVSMAKEAL 122 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~----~~~~~~~~~~~~l~~v~~~~~~~~~~ 122 (934)
.+.|++.||.|+....|-+.+ +.|+..|.+|..|..-.++++.... -.|.+|..... ++.++++++...++
T Consensus 42 ~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~g-I~~LLliNsti~Fv 116 (942)
T KOG0205|consen 42 VEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVG-ICCLLLINSTISFI 116 (942)
T ss_pred HHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhh-hheeeeecceeeee
Confidence 446889999999998888876 6788888999999999999888754 22345544433 44556678888888
Q ss_pred HHHHHhhhhhhhc---cceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcc
Q 002339 123 EDWRRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNL 199 (934)
Q Consensus 123 ~~~~r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~ 199 (934)
++++.-..-.++. ..++.|+ |||+|.+++.+.|+|||||.|+.|++||||++||+.. .+.||+|.|||||-|
T Consensus 117 eE~nAGn~aa~L~a~LA~KakVl-RDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD----~LkiDQSAlTGESLp 191 (942)
T KOG0205|consen 117 EENNAGNAAAALMAGLAPKAKVL-RDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD----PLKIDQSALTGESLP 191 (942)
T ss_pred eccccchHHHHHHhccCcccEEe-ecCeeeeeeccccccCceeeeccCCEecCccceecCC----ccccchhhhcCCccc
Confidence 8888777644443 4788999 8999999999999999999999999999999999854 489999999999999
Q ss_pred eeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchh
Q 002339 200 KVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSK 279 (934)
Q Consensus 200 ~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk 279 (934)
+.|++++.+ |+|+.+-+|+ +.+||++||..|.
T Consensus 192 vtKh~gd~v---------------------------fSgSTcKqGE---------------------~eaVViATg~~TF 223 (942)
T KOG0205|consen 192 VTKHPGDEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTF 223 (942)
T ss_pred cccCCCCce---------------------------ecccccccce---------------------EEEEEEEecccee
Confidence 999999988 9999999999 9999999999996
Q ss_pred hhhccC--CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHH
Q 002339 280 VMQNAT--TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357 (934)
Q Consensus 280 i~~~~~--~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (934)
.++-.. .+.....++++-++-+..++++.+. +.+++-+...++... .-| -...-
T Consensus 224 ~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~-~g~lie~~vmy~~q~----R~~-------------------r~~i~ 279 (942)
T KOG0205|consen 224 FGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIA-LGMLIEITVMYPIQH----RLY-------------------RDGID 279 (942)
T ss_pred ehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhh----hhh-------------------hhhhh
Confidence 654332 2356678999999998777654433 333222221111110 011 01222
Q ss_pred HHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEE--
Q 002339 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLK-- 435 (934)
Q Consensus 358 ~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~-- 435 (934)
+.+++++.-||++||..+++...+++.++ ++++++++...++|+|+.+|++|+|||||||.|++.+.+
T Consensus 280 nLlvllIGgiPiamPtVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl 349 (942)
T KOG0205|consen 280 NLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL 349 (942)
T ss_pred heheeeecccccccceeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCc
Confidence 34455566699999999999999999999 899999999999999999999999999999999998866
Q ss_pred E--EEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccC
Q 002339 436 C--SVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGN 513 (934)
Q Consensus 436 ~--~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (934)
+ +..|.. .
T Consensus 350 ~ev~v~gv~----~------------------------------------------------------------------ 359 (942)
T KOG0205|consen 350 IEVFVKGVD----K------------------------------------------------------------------ 359 (942)
T ss_pred ceeeecCCC----h------------------------------------------------------------------
Confidence 2 211110 0
Q ss_pred CCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCcee
Q 002339 514 WLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593 (934)
Q Consensus 514 ~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~ 593 (934)
+. ..++.|++. .. ...+..|.|++...++- +....
T Consensus 360 -------D~-~~L~A~rAs----r~-----------en~DAID~A~v~~L~dP----------------------Keara 394 (942)
T KOG0205|consen 360 -------DD-VLLTAARAS----RK-----------ENQDAIDAAIVGMLADP----------------------KEARA 394 (942)
T ss_pred -------HH-HHHHHHHHh----hh-----------cChhhHHHHHHHhhcCH----------------------HHHhh
Confidence 00 012222221 11 13578888888765420 11256
Q ss_pred EEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHH
Q 002339 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESE 673 (934)
Q Consensus 594 ~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e 673 (934)
.|+.++.+||++..||....+.+++|..+..+||||+.|++.|.... +.++...+.+++|+++|+|.|++|++..++..
T Consensus 395 ~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~-~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~ 473 (942)
T KOG0205|consen 395 GIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH-DIPERVHSIIDKFAERGLRSLAVARQEVPEKT 473 (942)
T ss_pred CceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC-cchHHHHHHHHHHHHhcchhhhhhhhcccccc
Confidence 78999999999999999999999999999999999999999998754 58999999999999999999999998877542
Q ss_pred HHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHH
Q 002339 674 YSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF 753 (934)
Q Consensus 674 ~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~ 753 (934)
- +.-....+|+|+.-+-||+|.+..++|.+....|..|-|+|||...-++..++
T Consensus 474 ~--------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgr 527 (942)
T KOG0205|consen 474 K--------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 527 (942)
T ss_pred c--------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhh
Confidence 0 11124688999999999999999999999999999999999999999999999
Q ss_pred HcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhh
Q 002339 754 ACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA 833 (934)
Q Consensus 754 ~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~ 833 (934)
.+|+-.+-.+--..-+.+.+ -.+.|.......+
T Consensus 528 rlgmgtnmypss~llG~~~~------------------------------------~~~~~~~v~elie----------- 560 (942)
T KOG0205|consen 528 RLGMGTNMYPSSALLGLGKD------------------------------------GSMPGSPVDELIE----------- 560 (942)
T ss_pred hhccccCcCCchhhccCCCC------------------------------------CCCCCCcHHHHhh-----------
Confidence 99985432110000000000 0011111111111
Q ss_pred hccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccc--hhhh
Q 002339 834 VECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF--LERL 911 (934)
Q Consensus 834 ~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~--l~~l 911 (934)
+.--|+.+.|+||..+|+.||+ .++.++|.|||.||+|+|+.||+||++.+.... |..+||+++..... +...
T Consensus 561 ---~adgfAgVfpehKy~iV~~Lq~-r~hi~gmtgdgvndapaLKkAdigiava~atda-ar~asdiVltepglSviI~a 635 (942)
T KOG0205|consen 561 ---KADGFAGVFPEHKYEIVKILQE-RKHIVGMTGDGVNDAPALKKADIGIAVADATDA-ARSASDIVLTEPGLSVIISA 635 (942)
T ss_pred ---hccCccccCHHHHHHHHHHHhh-cCceecccCCCcccchhhcccccceeeccchhh-hcccccEEEcCCCchhhHHH
Confidence 1226788999999999999998 899999999999999999999999999654331 77889999998665 4445
Q ss_pred HhhhchhhhHHhhhheEEEecc
Q 002339 912 LVVHGHWCYKRIAQMVIIKDFP 933 (934)
Q Consensus 912 ll~~Gr~~~~~i~~~i~~~~~k 933 (934)
+..+|.+|+|++.+..|.+.-
T Consensus 636 -vltSraIfqrmknytiyavsi 656 (942)
T KOG0205|consen 636 -VLTSRAIFQRMKNYTIYAVSI 656 (942)
T ss_pred -HHHHHHHHHHHhhheeeeehh
Confidence 789999999999999998753
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-62 Score=586.83 Aligned_cols=475 Identities=21% Similarity=0.230 Sum_probs=383.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhh------ccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCC
Q 002339 110 AIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYED 183 (934)
Q Consensus 110 ~~v~~~~~~~~~~~~~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~ 183 (934)
++++++..+.+++|.+.+.|+.+.+ ...+++|+ |||++++|++++|+|||+|+|++||.|||||+|++
T Consensus 210 ~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vi-r~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~----- 283 (741)
T PRK11033 210 AMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRL-RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS----- 283 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-----
Confidence 3445555667778877777765433 45789999 89999999999999999999999999999999999
Q ss_pred ceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeec
Q 002339 184 GICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN 263 (934)
Q Consensus 184 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n 263 (934)
|.+.||||+|||||.|+.|++++.+ |+||++.+|.
T Consensus 284 g~~~vdes~lTGEs~Pv~k~~Gd~V---------------------------~aGt~~~~G~------------------ 318 (741)
T PRK11033 284 PFASFDESALTGESIPVERATGEKV---------------------------PAGATSVDRL------------------ 318 (741)
T ss_pred CcEEeecccccCCCCCEecCCCCee---------------------------ccCCEEcCce------------------
Confidence 7799999999999999999998766 9999999998
Q ss_pred CCeEEEEEEEeccchhh---hhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCc
Q 002339 264 TAHVYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (934)
Q Consensus 264 t~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 340 (934)
+.+.|+.+|.+|.+ .+..++++.+++|+|+.+++++.++.+++++++++.+++|.++... +|
T Consensus 319 ---~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~----~~-------- 383 (741)
T PRK11033 319 ---VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA----PW-------- 383 (741)
T ss_pred ---EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC----CH--------
Confidence 99999999999955 4455677788999999999999999999999999988875332110 12
Q ss_pred cccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEe
Q 002339 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (934)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~ 420 (934)
...+.+++.+++.+|||+|.++.+++........ +++|+++|+.+.+|.|+++++|||
T Consensus 384 ------------~~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v~~v~f 441 (741)
T PRK11033 384 ------------QEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRVTTVAF 441 (741)
T ss_pred ------------HHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCCCEEEE
Confidence 2356778899999999999999988888877777 789999999999999999999999
Q ss_pred cCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccC
Q 002339 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (934)
Q Consensus 421 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (934)
|||||||+|+|++..+...+.. ++
T Consensus 442 DKTGTLT~g~~~v~~~~~~~~~-----~~--------------------------------------------------- 465 (741)
T PRK11033 442 DKTGTLTEGKPQVTDIHPATGI-----SE--------------------------------------------------- 465 (741)
T ss_pred eCCCCCcCCceEEEEEEecCCC-----CH---------------------------------------------------
Confidence 9999999999999987632210 00
Q ss_pred CCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEE
Q 002339 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580 (934)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i 580 (934)
.+++...+.. +..+.||.+.|+++++++.|..
T Consensus 466 -----------------------~~~l~~aa~~--------------e~~s~hPia~Ai~~~a~~~~~~----------- 497 (741)
T PRK11033 466 -----------------------SELLALAAAV--------------EQGSTHPLAQAIVREAQVRGLA----------- 497 (741)
T ss_pred -----------------------HHHHHHHHHH--------------hcCCCCHHHHHHHHHHHhcCCC-----------
Confidence 0122211111 1125799999999999875532
Q ss_pred EecCCCCCCCceeEEEEeEecCCCCCCceEE-EEEEc-CCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcC
Q 002339 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMS-VIVRD-EDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658 (934)
Q Consensus 581 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrms-viv~~-~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 658 (934)
+||.++++.+. .-++. -+|.. +.-|+++.+.+ ....+...++.+..+|
T Consensus 498 --------------------~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~--------~~~~~~~~~~~~~~~g 547 (741)
T PRK11033 498 --------------------IPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP--------LADAFAGQINELESAG 547 (741)
T ss_pred --------------------CCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh--------ccHHHHHHHHHHHhCC
Confidence 34455555442 11221 23433 23478877643 1233455667889999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEE
Q 002339 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (934)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ 738 (934)
.|++++|+ |.+++|+++++|++|++++++|++|+++|++++
T Consensus 548 ~~~v~va~---------------------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~ 588 (741)
T PRK11033 548 KTVVLVLR---------------------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGV 588 (741)
T ss_pred CEEEEEEE---------------------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEE
Confidence 99999994 668999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhh
Q 002339 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (934)
Q Consensus 739 mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 818 (934)
|+|||+..+|..+|+++||.
T Consensus 589 llTGd~~~~a~~ia~~lgi~------------------------------------------------------------ 608 (741)
T PRK11033 589 MLTGDNPRAAAAIAGELGID------------------------------------------------------------ 608 (741)
T ss_pred EEcCCCHHHHHHHHHHcCCC------------------------------------------------------------
Confidence 99999999999999999983
Q ss_pred HhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHh
Q 002339 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMA 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~ 897 (934)
.+++..|++|..+|+.+++ . +.|+|+|||.||++||+.|||||+|+ +.+. ++++
T Consensus 609 ---------------------~~~~~~p~~K~~~v~~l~~-~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~--a~~~ 663 (741)
T PRK11033 609 ---------------------FRAGLLPEDKVKAVTELNQ-H-APLAMVGDGINDAPAMKAASIGIAMGSGTDV--ALET 663 (741)
T ss_pred ---------------------eecCCCHHHHHHHHHHHhc-C-CCEEEEECCHHhHHHHHhCCeeEEecCCCHH--HHHh
Confidence 3345789999999999986 3 58999999999999999999999995 5665 8899
Q ss_pred CcEeecCccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 898 SDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 898 AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
||+++.+.+. |..+ +..||..++++++++.|.|
T Consensus 664 adivl~~~~l~~l~~~-i~~sr~~~~~I~~nl~~a~ 698 (741)
T PRK11033 664 ADAALTHNRLRGLAQM-IELSRATHANIRQNITIAL 698 (741)
T ss_pred CCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999987665 6666 8999999999999998764
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-63 Score=558.97 Aligned_cols=495 Identities=21% Similarity=0.248 Sum_probs=396.2
Q ss_pred HHHHHHHHHHHHHHHhhhhh------hhccceEEEEeCCCe-EEEeecccCccCcEEEeccCcccCCeEEEEeecCCCce
Q 002339 113 VGVSMAKEALEDWRRFMQDK------EVNARKVSVHVGNGV-FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGI 185 (934)
Q Consensus 113 ~~~~~~~~~~~~~~r~k~~~------~~n~~~~~V~~r~g~-~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~ 185 (934)
+.+..+.+++|..-++|+.. .+.+.++.++ .+|+ .++|+...|++||+|+|.||+.||+||++++ |.
T Consensus 348 i~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii-~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~-----Gs 421 (951)
T KOG0207|consen 348 ITFITLGRWLESLAKGKTSEALSKLMSLAPSKATII-EDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD-----GS 421 (951)
T ss_pred HHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEe-ecCCcceEeeeeeeccCCEEEECCCCccccccEEEe-----Cc
Confidence 34556677888888887644 3346889988 7886 8999999999999999999999999999999 88
Q ss_pred EEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCC
Q 002339 186 CYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTA 265 (934)
Q Consensus 186 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~ 265 (934)
++||||.+|||+.|+.|++++.+ .+|+++.+|.
T Consensus 422 s~VDEs~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~-------------------- 454 (951)
T KOG0207|consen 422 SEVDESLITGESMPVPKKKGSTV---------------------------IAGSINLNGT-------------------- 454 (951)
T ss_pred eeechhhccCCceecccCCCCee---------------------------eeeeecCCce--------------------
Confidence 99999999999999999999887 8999999999
Q ss_pred eEEEEEEEeccchh---hhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccc
Q 002339 266 HVYGSVIFTGHDSK---VMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVY 342 (934)
Q Consensus 266 ~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 342 (934)
.+.-+..+|.||. |.++.++++..++|+|+.+|+++.++.++++++++.++++|.+..... .||
T Consensus 455 -l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~---~~~--------- 521 (951)
T KOG0207|consen 455 -LLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIV---FKY--------- 521 (951)
T ss_pred -EEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccc---ccC---------
Confidence 9999999999995 556667899999999999999999999999999999999988866533 222
Q ss_pred cCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecC
Q 002339 343 FNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDK 422 (934)
Q Consensus 343 ~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DK 422 (934)
+..........|..++.+++.+|||+|.++.+++.+.+.... +.+|+++|..+.+|.+.+|++|.|||
T Consensus 522 --~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGge~LE~~hkv~tVvFDK 589 (951)
T KOG0207|consen 522 --PRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGGEALEKAHKVKTVVFDK 589 (951)
T ss_pred --cchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCcHHHHHHhcCCEEEEcC
Confidence 111112334588889999999999999999999888777766 89999999999999999999999999
Q ss_pred CCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCC
Q 002339 423 TGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGF 502 (934)
Q Consensus 423 TGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (934)
|||||+|++.+.++...... .
T Consensus 590 TGTLT~G~~~V~~~~~~~~~----~------------------------------------------------------- 610 (951)
T KOG0207|consen 590 TGTLTEGKPTVVDFKSLSNP----I------------------------------------------------------- 610 (951)
T ss_pred CCceecceEEEEEEEecCCc----c-------------------------------------------------------
Confidence 99999999999998754321 0
Q ss_pred ccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEe
Q 002339 503 NFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRE 582 (934)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~ 582 (934)
...+++...+ ..+-.++||...|++++|+...... +..
T Consensus 611 -------------------~~~e~l~~v~--------------a~Es~SeHPig~AIv~yak~~~~~~-----~~~---- 648 (951)
T KOG0207|consen 611 -------------------SLKEALALVA--------------AMESGSEHPIGKAIVDYAKEKLVEP-----NPE---- 648 (951)
T ss_pred -------------------cHHHHHHHHH--------------HHhcCCcCchHHHHHHHHHhccccc-----Ccc----
Confidence 0112222211 1112358999999999999876111 000
Q ss_pred cCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEE
Q 002339 583 RYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTL 662 (934)
Q Consensus 583 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l 662 (934)
.++..-.|..+.....+.+. +.. .+-|.-+.|. +++....+.+.+.+++....|..+.
T Consensus 649 -------------~~~~~~~~pg~g~~~~~~~~---~~~--i~iGN~~~~~----r~~~~~~~~i~~~~~~~e~~g~tvv 706 (951)
T KOG0207|consen 649 -------------GVLSFEYFPGEGIYVTVTVD---GNE--VLIGNKEWMS----RNGCSIPDDILDALTESERKGQTVV 706 (951)
T ss_pred -------------ccceeecccCCCcccceEEe---eeE--EeechHHHHH----hcCCCCchhHHHhhhhHhhcCceEE
Confidence 11111112222211111111 111 3446654443 2333355678888889999999999
Q ss_pred EEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcC
Q 002339 663 ALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTG 742 (934)
Q Consensus 663 ~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTG 742 (934)
++|. |.+++|+++++|++|+|+..+|+.|++.||++.|+||
T Consensus 707 ~v~v---------------------------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTG 747 (951)
T KOG0207|consen 707 YVAV---------------------------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTG 747 (951)
T ss_pred EEEE---------------------------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcC
Confidence 9994 7789999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhh
Q 002339 743 DKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALE 822 (934)
Q Consensus 743 D~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~ 822 (934)
|+..+|.++|+++|+..
T Consensus 748 Dn~~aA~svA~~VGi~~--------------------------------------------------------------- 764 (951)
T KOG0207|consen 748 DNDAAARSVAQQVGIDN--------------------------------------------------------------- 764 (951)
T ss_pred CCHHHHHHHHHhhCcce---------------------------------------------------------------
Confidence 99999999999999532
Q ss_pred HHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcEe
Q 002339 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDFS 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~i 901 (934)
|+|++.|+||.+.|+.+|+ .++.|+|+|||.||+|+|.+|||||+|+ |++. |.++||++
T Consensus 765 -----------------V~aev~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPALA~AdVGIaig~gs~v--AieaADIV 824 (951)
T KOG0207|consen 765 -----------------VYAEVLPEQKAEKIKEIQK-NGGPVAMVGDGINDAPALAQADVGIAIGAGSDV--AIEAADIV 824 (951)
T ss_pred -----------------EEeccCchhhHHHHHHHHh-cCCcEEEEeCCCCccHHHHhhccceeeccccHH--HHhhCCEE
Confidence 9999999999999999998 7899999999999999999999999994 7777 99999999
Q ss_pred ecCccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 902 IAQFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 902 i~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
|++.+. +... +..+|+..+|++.++.|.+
T Consensus 825 Lmrn~L~~v~~a-i~LSrkt~~rIk~N~~~A~ 855 (951)
T KOG0207|consen 825 LMRNDLRDVPFA-IDLSRKTVKRIKLNFVWAL 855 (951)
T ss_pred EEccchhhhHHH-HHHHHHHHhhHHHHHHHHH
Confidence 998755 3344 7899999999999887764
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-60 Score=560.47 Aligned_cols=480 Identities=23% Similarity=0.273 Sum_probs=373.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhh------ccceEEEEeCCC-eEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCce
Q 002339 113 VGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNG-VFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGI 185 (934)
Q Consensus 113 ~~~~~~~~~~~~~~r~k~~~~~------n~~~~~V~~r~g-~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~ 185 (934)
+++..+..+++.+.++++.+.+ ++..++|+ |+| +++++++++|+|||+|.|++||.|||||+|++ |.
T Consensus 25 ~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~-r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~-----g~ 98 (556)
T TIGR01525 25 LFLFLLGETLEERAKGRASDALSALLALAPSTARVL-QGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS-----GE 98 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe-----cc
Confidence 3333444555555555544433 34779999 774 99999999999999999999999999999999 77
Q ss_pred EEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCC
Q 002339 186 CYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTA 265 (934)
Q Consensus 186 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~ 265 (934)
+.||||+|||||.|+.|++++.. |+||.+.+|.
T Consensus 99 ~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~g~-------------------- 131 (556)
T TIGR01525 99 SEVDESALTGESMPVEKKEGDEV---------------------------FAGTINGDGS-------------------- 131 (556)
T ss_pred eEEeehhccCCCCCEecCCcCEE---------------------------eeceEECCce--------------------
Confidence 99999999999999999987655 9999999998
Q ss_pred eEEEEEEEeccchhhhhcc---CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccc
Q 002339 266 HVYGSVIFTGHDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVY 342 (934)
Q Consensus 266 ~~~gvVv~tG~~Tki~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 342 (934)
+.++|+.||.+|.+++.. .....+++++++.+++++.++.++.++++++.+++|.+...
T Consensus 132 -~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~----------------- 193 (556)
T TIGR01525 132 -LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA----------------- 193 (556)
T ss_pred -EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------
Confidence 999999999999776544 35566789999999999999999999999888877543210
Q ss_pred cCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecC
Q 002339 343 FNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDK 422 (934)
Q Consensus 343 ~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DK 422 (934)
...+..++.+++.+|||+|+++++++...+..++ .++++++|+++.+|.||++|++||||
T Consensus 194 ----------~~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~~~~le~l~~v~~i~fDK 253 (556)
T TIGR01525 194 ----------LGALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKGGDALEKLAKVKTVVFDK 253 (556)
T ss_pred ----------chHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecCchHHHHhhcCCEEEEeC
Confidence 0367788999999999999999999999999988 88999999999999999999999999
Q ss_pred CCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCC
Q 002339 423 TGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGF 502 (934)
Q Consensus 423 TGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (934)
|||||+|+|++.++...+... .
T Consensus 254 TGTLT~~~~~v~~~~~~~~~~-~--------------------------------------------------------- 275 (556)
T TIGR01525 254 TGTLTTGKPTVVDVEPLDDAS-I--------------------------------------------------------- 275 (556)
T ss_pred CCCCcCCceEEEEEEecCCCC-c---------------------------------------------------------
Confidence 999999999999886432110 0
Q ss_pred ccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEe
Q 002339 503 NFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRE 582 (934)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~ 582 (934)
...+++...+.+. ..+.||.+.|+++++++.|..... +
T Consensus 276 -------------------~~~~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~~~~~~--~------- 313 (556)
T TIGR01525 276 -------------------SEEELLALAAALE--------------QSSSHPLARAIVRYAKKRGLELPK--Q------- 313 (556)
T ss_pred -------------------cHHHHHHHHHHHh--------------ccCCChHHHHHHHHHHhcCCCccc--c-------
Confidence 0012222222111 124799999999999987653211 0
Q ss_pred cCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEE
Q 002339 583 RYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTL 662 (934)
Q Consensus 583 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l 662 (934)
. ++ ..++ .+.+...+ +|. ..+..|+++.+ ..... ........++.++.+|+|++
T Consensus 314 ---------~-~~---~~~~----~~gi~~~~---~g~-~~~~lg~~~~~----~~~~~-~~~~~~~~~~~~~~~g~~~~ 367 (556)
T TIGR01525 314 ---------E-DV---EEVP----GKGVEATV---DGQ-EEVRIGNPRLL----ELAAE-PISASPDLLNEGESQGKTVV 367 (556)
T ss_pred ---------c-Ce---eEec----CCeEEEEE---CCe-eEEEEecHHHH----hhcCC-CchhhHHHHHHHhhCCcEEE
Confidence 0 00 0000 11122221 110 22334555544 11111 12233456778889999999
Q ss_pred EEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcC-CeEEEEc
Q 002339 663 ALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAG-LKIWVLT 741 (934)
Q Consensus 663 ~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aG-Ikv~mlT 741 (934)
.+|. |.+++|.+.++|+++|+++++|+.|+++| ++++|+|
T Consensus 368 ~v~~---------------------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivT 408 (556)
T TIGR01525 368 FVAV---------------------------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLT 408 (556)
T ss_pred EEEE---------------------------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEe
Confidence 9983 66899999999999999999999999999 9999999
Q ss_pred CCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhh
Q 002339 742 GDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (934)
Q Consensus 742 GD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~ 821 (934)
||+..++..+++++|+..
T Consensus 409 gd~~~~a~~i~~~lgi~~-------------------------------------------------------------- 426 (556)
T TIGR01525 409 GDNRSAAEAVAAELGIDE-------------------------------------------------------------- 426 (556)
T ss_pred CCCHHHHHHHHHHhCCCe--------------------------------------------------------------
Confidence 999999999999999932
Q ss_pred hHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcc-cchhhHHHhCcE
Q 002339 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG-VEGMQAVMASDF 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~-~e~~~a~~~AD~ 900 (934)
+|+++.|++|..+++.++. .++.|+|+|||.||++|++.||+||++++ .+. ++..||+
T Consensus 427 ------------------~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~--~~~~Ad~ 485 (556)
T TIGR01525 427 ------------------VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPALAAADVGIAMGAGSDV--AIEAADI 485 (556)
T ss_pred ------------------eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHHhhCCEeEEeCCCCHH--HHHhCCE
Confidence 6778899999999999997 78899999999999999999999999963 444 8889999
Q ss_pred eecCccc--hhhhHhhhchhhhHHhhhheEEEec
Q 002339 901 SIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDF 932 (934)
Q Consensus 901 ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~ 932 (934)
++.+.++ +..+ +..||..++++++++.|.+.
T Consensus 486 vi~~~~~~~l~~~-i~~~r~~~~~i~~nl~~a~~ 518 (556)
T TIGR01525 486 VLLNDDLSSLPTA-IDLSRKTRRIIKQNLAWALG 518 (556)
T ss_pred EEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 9997444 7777 89999999999999887653
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-59 Score=550.45 Aligned_cols=466 Identities=21% Similarity=0.274 Sum_probs=370.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhh------hccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCc
Q 002339 111 IVVGVSMAKEALEDWRRFMQDKE------VNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (934)
Q Consensus 111 ~v~~~~~~~~~~~~~~r~k~~~~------~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G 184 (934)
+++++..+.+++|++.++++.+. +.+.+++|++++|.+++|+.++|+|||+|+|++||.|||||+|++ |
T Consensus 59 ~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~-----g 133 (562)
T TIGR01511 59 MLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE-----G 133 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE-----C
Confidence 44444555667777766555433 334788998556888999999999999999999999999999999 8
Q ss_pred eEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecC
Q 002339 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (934)
Q Consensus 185 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 264 (934)
.+.||||+|||||.|+.|++++.+ |+||++.+|.
T Consensus 134 ~~~vdes~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~g~------------------- 167 (562)
T TIGR01511 134 ESEVDESLVTGESLPVPKKVGDPV---------------------------IAGTVNGTGS------------------- 167 (562)
T ss_pred ceEEehHhhcCCCCcEEcCCCCEE---------------------------EeeeEECCce-------------------
Confidence 899999999999999999998766 9999999999
Q ss_pred CeEEEEEEEeccchhhhh---ccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCcc
Q 002339 265 AHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (934)
Q Consensus 265 ~~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 341 (934)
+.+.|+.||.+|.+++ ..++++.+++++++.+++++.++++++++++++.+++|.
T Consensus 168 --~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-------------------- 225 (562)
T TIGR01511 168 --LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-------------------- 225 (562)
T ss_pred --EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 9999999999996554 445667778999999999999999999888888776532
Q ss_pred ccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEec
Q 002339 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421 (934)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~D 421 (934)
..+.+++.+++.+|||+|+++++++...+...+ +++|+++|+++.+|.|+++|+||||
T Consensus 226 ------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 226 ------------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred ------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHHHHHhhCCCEEEEC
Confidence 356778999999999999999999999999888 8999999999999999999999999
Q ss_pred CCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCC
Q 002339 422 KTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKG 501 (934)
Q Consensus 422 KTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (934)
||||||+|+|++..+...+.. +
T Consensus 284 KTGTLT~g~~~v~~i~~~~~~-----~----------------------------------------------------- 305 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHVFGDR-----D----------------------------------------------------- 305 (562)
T ss_pred CCCCCcCCCEEEEEEecCCCC-----C-----------------------------------------------------
Confidence 999999999999987532210 0
Q ss_pred CccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEE
Q 002339 502 FNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIR 581 (934)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~ 581 (934)
. .+++..++.+ +..+.||.+.|+++++++.|.....-
T Consensus 306 ------------------~---~~~l~~aa~~--------------e~~s~HPia~Ai~~~~~~~~~~~~~~-------- 342 (562)
T TIGR01511 306 ------------------R---TELLALAAAL--------------EAGSEHPLAKAIVSYAKEKGITLVEV-------- 342 (562)
T ss_pred ------------------H---HHHHHHHHHH--------------hccCCChHHHHHHHHHHhcCCCcCCC--------
Confidence 0 1222222111 11247999999999998776532110
Q ss_pred ecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeE
Q 002339 582 ERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRT 661 (934)
Q Consensus 582 ~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~ 661 (934)
..++. + ..+.+...+ +| ..+..|+++.+.+. +... .++..+|.++
T Consensus 343 -----------~~~~~---~----~g~Gi~~~~---~g--~~~~iG~~~~~~~~----~~~~--------~~~~~~g~~~ 387 (562)
T TIGR01511 343 -----------SDFKA---I----PGIGVEGTV---EG--TKIQLGNEKLLGEN----AIKI--------DGKAEQGSTS 387 (562)
T ss_pred -----------CCeEE---E----CCceEEEEE---CC--EEEEEECHHHHHhC----CCCC--------ChhhhCCCEE
Confidence 01110 0 012222222 22 23456887765321 1111 1234689998
Q ss_pred EEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEc
Q 002339 662 LALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLT 741 (934)
Q Consensus 662 l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlT 741 (934)
+.++ .|.+++|+++++|+++|+++++|++|++.|++++|+|
T Consensus 388 ~~~~---------------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilS 428 (562)
T TIGR01511 388 VLVA---------------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLT 428 (562)
T ss_pred EEEE---------------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEc
Confidence 8887 4778999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhh
Q 002339 742 GDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (934)
Q Consensus 742 GD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~ 821 (934)
||+..+|..+++++|+.
T Consensus 429 gd~~~~a~~ia~~lgi~--------------------------------------------------------------- 445 (562)
T TIGR01511 429 GDNRKTAKAVAKELGIN--------------------------------------------------------------- 445 (562)
T ss_pred CCCHHHHHHHHHHcCCc---------------------------------------------------------------
Confidence 99999999999999982
Q ss_pred hHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcE
Q 002339 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDF 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~ 900 (934)
+++++.|++|..+++.++. .++.|+|+|||.||++|++.||+||+|+ +.+. ++..||+
T Consensus 446 ------------------~~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~--a~~~Adv 504 (562)
T TIGR01511 446 ------------------VRAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALAQADVGIAIGAGTDV--AIEAADV 504 (562)
T ss_pred ------------------EEccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHH--HHhhCCE
Confidence 4556789999999999997 7899999999999999999999999996 4444 8899999
Q ss_pred eecC--ccchhhhHhhhchhhhHHhhhheEEEe
Q 002339 901 SIAQ--FRFLERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 901 ii~~--~~~l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
++.+ ++.|..+ +..||..++++++++.|.+
T Consensus 505 vl~~~~l~~l~~~-i~lsr~~~~~i~qn~~~a~ 536 (562)
T TIGR01511 505 VLMRNDLNDVATA-IDLSRKTLRRIKQNLLWAF 536 (562)
T ss_pred EEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9985 4447777 8999999999999987765
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-59 Score=541.52 Aligned_cols=469 Identities=20% Similarity=0.242 Sum_probs=366.1
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHHhhhhh---hhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEE
Q 002339 101 SPVSMLLPLAIVVGVSMAKEALEDWRRFMQDK---EVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFL 177 (934)
Q Consensus 101 ~~~~~~~~l~~v~~~~~~~~~~~~~~r~k~~~---~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL 177 (934)
.|+... .+++++++....+.+.+++..+..+ .+++++++|+ |+|+++.+++++|+|||+|.|++||.|||||+|+
T Consensus 17 ~~~~~~-~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~-r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii 94 (536)
T TIGR01512 17 EYLEGA-LLLLLFSIGETLEEYASGRARRALKALMELAPDTARVL-RGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVL 94 (536)
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEE
Confidence 344443 2334444444444444444443333 2356889999 8999999999999999999999999999999999
Q ss_pred eecCCCceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeec
Q 002339 178 SSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLR 257 (934)
Q Consensus 178 ~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~r 257 (934)
+ |.+.||||+|||||.|+.|++++.. |+||.+.+|.
T Consensus 95 ~-----g~~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~G~------------ 130 (536)
T TIGR01512 95 S-----GTSTVDESALTGESVPVEKAPGDEV---------------------------FAGAINLDGV------------ 130 (536)
T ss_pred e-----CcEEEEecccCCCCCcEEeCCCCEE---------------------------EeeeEECCce------------
Confidence 9 7799999999999999999987655 9999999998
Q ss_pred ceEeecCCeEEEEEEEeccchhhhhcc---CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCcccc
Q 002339 258 DSKLRNTAHVYGSVIFTGHDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYL 334 (934)
Q Consensus 258 gs~l~nt~~~~gvVv~tG~~Tki~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~ 334 (934)
+.++|+.||.+|.+++.. ......++++++.+++++.++.+++++++++.++++.+... |
T Consensus 131 ---------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-- 193 (536)
T TIGR01512 131 ---------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR------W-- 193 (536)
T ss_pred ---------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------c--
Confidence 999999999999776544 45566789999999999999999998888877766432110 1
Q ss_pred CCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCcccccccc
Q 002339 335 KPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQ 414 (934)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~ 414 (934)
...+.+++.+++.+|||+|+++++++...+..++ .++++++|+++.+|.||+
T Consensus 194 ------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~----------~k~gilik~~~~le~l~~ 245 (536)
T TIGR01512 194 ------------------PFWVYRALVLLVVASPCALVISAPAAYLSAISAA----------ARHGILIKGGAALEALAK 245 (536)
T ss_pred ------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH----------HHCCeEEcCcHHHHhhcC
Confidence 1267778899999999999999999999999888 899999999999999999
Q ss_pred ceEEEecCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCC
Q 002339 415 VDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGND 494 (934)
Q Consensus 415 v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (934)
++++|||||||||+|+|++.++...
T Consensus 246 v~~i~fDKTGTLT~~~~~v~~~~~~------------------------------------------------------- 270 (536)
T TIGR01512 246 IKTVAFDKTGTLTTGRPKVVDVVPA------------------------------------------------------- 270 (536)
T ss_pred CCEEEECCCCCCcCCceEEEEeeHH-------------------------------------------------------
Confidence 9999999999999999999887420
Q ss_pred cccccCCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeec
Q 002339 495 FKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRT 574 (934)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~ 574 (934)
+++...+.+ +..+.||.+.|+++++++.+ .+
T Consensus 271 ------------------------------~~l~~a~~~--------------e~~~~hp~~~Ai~~~~~~~~-~~---- 301 (536)
T TIGR01512 271 ------------------------------EVLRLAAAA--------------EQASSHPLARAIVDYARKRE-NV---- 301 (536)
T ss_pred ------------------------------HHHHHHHHH--------------hccCCCcHHHHHHHHHHhcC-CC----
Confidence 111111111 01247999999999998654 10
Q ss_pred CCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHH
Q 002339 575 QSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEY 654 (934)
Q Consensus 575 ~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~ 654 (934)
..++ .+| .+.+...+ +|.. +..|+++.+.+. + ...+
T Consensus 302 ------------------~~~~---~~~----g~gi~~~~---~g~~--~~ig~~~~~~~~----~----------~~~~ 337 (536)
T TIGR01512 302 ------------------ESVE---EVP----GEGVRAVV---DGGE--VRIGNPRSLEAA----V----------GARP 337 (536)
T ss_pred ------------------cceE---Eec----CCeEEEEE---CCeE--EEEcCHHHHhhc----C----------Ccch
Confidence 0000 011 11122211 2332 234776544221 1 0145
Q ss_pred HhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcC
Q 002339 655 GEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAG 734 (934)
Q Consensus 655 ~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aG 734 (934)
..+|.+++.++ .|..++|.+.++|+++|+++++|+.|+++|
T Consensus 338 ~~~~~~~~~v~---------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~G 378 (536)
T TIGR01512 338 ESAGKTIVHVA---------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALG 378 (536)
T ss_pred hhCCCeEEEEE---------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcC
Confidence 56788877666 477899999999999999999999999999
Q ss_pred C-eEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEc
Q 002339 735 L-KIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIE 813 (934)
Q Consensus 735 I-kv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~ 813 (934)
+ +++|+|||+..+|..+++++|+..
T Consensus 379 i~~v~vvTgd~~~~a~~i~~~lgi~~------------------------------------------------------ 404 (536)
T TIGR01512 379 IEKVVMLTGDRRAVAERVARELGIDE------------------------------------------------------ 404 (536)
T ss_pred CCcEEEEcCCCHHHHHHHHHHcCChh------------------------------------------------------
Confidence 9 999999999999999999999842
Q ss_pred ChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc--ccch
Q 002339 814 GKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEG 891 (934)
Q Consensus 814 g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~ 891 (934)
+++++.|++|..+++.++. .++.|+|+|||.||++|++.||+||+++ +.+.
T Consensus 405 --------------------------~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~ 457 (536)
T TIGR01512 405 --------------------------VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPALAAADVGIAMGASGSDV 457 (536)
T ss_pred --------------------------hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHH
Confidence 5667889999999999997 7899999999999999999999999996 3344
Q ss_pred hhHHHhCcEeecC--ccchhhhHhhhchhhhHHhhhheEEEe
Q 002339 892 MQAVMASDFSIAQ--FRFLERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 892 ~~a~~~AD~ii~~--~~~l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
++.+||+++.+ +..|..+ +..||..++++++++.|.+
T Consensus 458 --~~~~ad~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~a~ 496 (536)
T TIGR01512 458 --AIETADVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVIAL 496 (536)
T ss_pred --HHHhCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 88999999954 5557777 8999999999999988754
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-57 Score=557.69 Aligned_cols=480 Identities=19% Similarity=0.233 Sum_probs=383.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhh------ccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCC
Q 002339 110 AIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYED 183 (934)
Q Consensus 110 ~~v~~~~~~~~~~~~~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~ 183 (934)
.+++++..+.+++|.+-+.++.+.+ .+.+++|+ |+|.+++|+.++|+|||+|+|++||.|||||+|++
T Consensus 290 ~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~-~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~----- 363 (834)
T PRK10671 290 AMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVV-TDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ----- 363 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE-eCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE-----
Confidence 3445556677888888777765443 34788999 79999999999999999999999999999999999
Q ss_pred ceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeec
Q 002339 184 GICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN 263 (934)
Q Consensus 184 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n 263 (934)
|.+.||||+|||||.|+.|++++.+ |+||++.+|.
T Consensus 364 g~~~vdeS~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~G~------------------ 398 (834)
T PRK10671 364 GEAWLDEAMLTGEPIPQQKGEGDSV---------------------------HAGTVVQDGS------------------ 398 (834)
T ss_pred ceEEEeehhhcCCCCCEecCCCCEE---------------------------Eecceeccee------------------
Confidence 8899999999999999999998776 9999999999
Q ss_pred CCeEEEEEEEeccchhhh---hccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCc
Q 002339 264 TAHVYGSVIFTGHDSKVM---QNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (934)
Q Consensus 264 t~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 340 (934)
+.+.|+.||.+|.++ +..++++..++++++.+++++.++++++++++++++++|.+... +
T Consensus 399 ---~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~------~-------- 461 (834)
T PRK10671 399 ---VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP------A-------- 461 (834)
T ss_pred ---EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------c--------
Confidence 999999999999554 44556677789999999999999999999999888877543210 0
Q ss_pred cccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEe
Q 002339 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (934)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~ 420 (934)
..+...+.+++.+++.+|||+|+++++++...+..++ +++|+++|+++.+|.||+++++||
T Consensus 462 ---------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 462 ---------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred ---------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHHhhcCCCEEEE
Confidence 0113467789999999999999999999999999988 899999999999999999999999
Q ss_pred cCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccC
Q 002339 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (934)
Q Consensus 421 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (934)
|||||||+|+|++..+...+.. ++
T Consensus 523 DKTGTLT~g~~~v~~~~~~~~~-----~~--------------------------------------------------- 546 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKTFNGV-----DE--------------------------------------------------- 546 (834)
T ss_pred cCCCccccCceEEEEEEccCCC-----CH---------------------------------------------------
Confidence 9999999999999887532110 00
Q ss_pred CCccccccccccCCCCCCChhHHHHHH-HHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEE
Q 002339 501 GFNFEDSRLMDGNWLKEPNVDTLLLFF-RILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (934)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~ 579 (934)
.+++ .+.+++. .+.||.+.|++++++..... .
T Consensus 547 -----------------------~~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~--~------- 579 (834)
T PRK10671 547 -----------------------AQALRLAAALEQ---------------GSSHPLARAILDKAGDMTLP--Q------- 579 (834)
T ss_pred -----------------------HHHHHHHHHHhC---------------CCCCHHHHHHHHHHhhCCCC--C-------
Confidence 0111 1222221 14799999999988643210 0
Q ss_pred EEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCC
Q 002339 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (934)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Gl 659 (934)
...++... .+.+... .+|. .+..|+++.+..... ....+...++.+..+|.
T Consensus 580 ------------~~~~~~~~-------g~Gv~~~---~~g~--~~~~G~~~~~~~~~~-----~~~~~~~~~~~~~~~g~ 630 (834)
T PRK10671 580 ------------VNGFRTLR-------GLGVSGE---AEGH--ALLLGNQALLNEQQV-----DTKALEAEITAQASQGA 630 (834)
T ss_pred ------------cccceEec-------ceEEEEE---ECCE--EEEEeCHHHHHHcCC-----ChHHHHHHHHHHHhCCC
Confidence 01111110 0111111 1333 345699887643211 12345666778889999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEE
Q 002339 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (934)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~m 739 (934)
+++.+|+ |..++|++++.|++||+++++|+.|++.|++++|
T Consensus 631 ~~v~va~---------------------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~ 671 (834)
T PRK10671 631 TPVLLAV---------------------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVM 671 (834)
T ss_pred eEEEEEE---------------------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEE
Confidence 9999994 5579999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhH
Q 002339 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (934)
Q Consensus 740 lTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 819 (934)
+|||+..+|..+++++|+..
T Consensus 672 ~Tgd~~~~a~~ia~~lgi~~------------------------------------------------------------ 691 (834)
T PRK10671 672 LTGDNPTTANAIAKEAGIDE------------------------------------------------------------ 691 (834)
T ss_pred EcCCCHHHHHHHHHHcCCCE------------------------------------------------------------
Confidence 99999999999999999842
Q ss_pred hhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhC
Q 002339 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMAS 898 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~A 898 (934)
+++++.|++|.++++.++. .++.|+|+|||.||++|++.||+||+|+ +.+. ++++|
T Consensus 692 --------------------~~~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~--a~~~a 748 (834)
T PRK10671 692 --------------------VIAGVLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPALAQADVGIAMGGGSDV--AIETA 748 (834)
T ss_pred --------------------EEeCCCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHH--HHHhC
Confidence 6778899999999999997 7889999999999999999999999995 4555 89999
Q ss_pred cEeecCccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 899 DFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 899 D~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
|+++.+.+. |..+ +..||..++++++++.|.|
T Consensus 749 d~vl~~~~~~~i~~~-i~l~r~~~~~i~~Nl~~a~ 782 (834)
T PRK10671 749 AITLMRHSLMGVADA-LAISRATLRNMKQNLLGAF 782 (834)
T ss_pred CEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 999987555 7777 8999999999999988765
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-52 Score=437.92 Aligned_cols=487 Identities=20% Similarity=0.258 Sum_probs=368.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhhc----cceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCC
Q 002339 107 LPLAIVVGVSMAKEALEDWRRFMQDKEVN----ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (934)
Q Consensus 107 ~~l~~v~~~~~~~~~~~~~~r~k~~~~~n----~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~ 182 (934)
+.|+|.+++.-+-|++.+-|-+-+-..+. ...++++..+|.++.+++.+|+.||+|+|+.||.||+||.+++
T Consensus 70 ~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe---- 145 (681)
T COG2216 70 IILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE---- 145 (681)
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe----
Confidence 44556666666777777765444322222 2446666456999999999999999999999999999999999
Q ss_pred CceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEee
Q 002339 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (934)
Q Consensus 183 ~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~ 262 (934)
|.++||||.+||||.|+.|.++-... + +--|+.+.
T Consensus 146 -G~asVdESAITGESaPViresGgD~s----------------------------s----------------VtGgT~v~ 180 (681)
T COG2216 146 -GVASVDESAITGESAPVIRESGGDFS----------------------------S----------------VTGGTRVL 180 (681)
T ss_pred -eeeecchhhccCCCcceeeccCCCcc----------------------------c----------------ccCCcEEe
Confidence 99999999999999999999874321 0 01133333
Q ss_pred cCCeEEEEEEEeccch---hhhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCC
Q 002339 263 NTAHVYGSVIFTGHDS---KVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (934)
Q Consensus 263 nt~~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~ 339 (934)
++|+...+...-.+| ++...++.+..+++|-|..++.+..-+.++.+ +++++..-+..|..
T Consensus 181 -SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL-~~~~Tl~p~a~y~~-------------- 244 (681)
T COG2216 181 -SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFL-LAVATLYPFAIYSG-------------- 244 (681)
T ss_pred -eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHH-HHHHhhhhHHHHcC--------------
Confidence 688988888877777 55667788888899999998877655543222 22222111111110
Q ss_pred ccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEE
Q 002339 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (934)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~ 419 (934)
+. -..+...+.+++.++|..+.-.++-.-..++-++ .+.+++.++..+.|..|.||+++
T Consensus 245 ------g~-----~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv----------~~~NViA~SGRAVEaaGDvdtli 303 (681)
T COG2216 245 ------GG-----AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV----------TQFNVIATSGRAVEAAGDVDTLL 303 (681)
T ss_pred ------CC-----CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHh----------hhhceeecCcchhhhcCCccEEE
Confidence 00 1234456777889999988877776666666666 78899999999999999999999
Q ss_pred ecCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCccccc
Q 002339 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (934)
Q Consensus 420 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (934)
.|||||+|-|+-.-..++..+.
T Consensus 304 LDKTGTIT~GnR~A~~f~p~~g---------------------------------------------------------- 325 (681)
T COG2216 304 LDKTGTITLGNRQASEFIPVPG---------------------------------------------------------- 325 (681)
T ss_pred ecccCceeecchhhhheecCCC----------------------------------------------------------
Confidence 9999999987654433321110
Q ss_pred CCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEE
Q 002339 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (934)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~ 579 (934)
...+++..+..+++-. -..|...++++.|++.|+....+.
T Consensus 326 ---------------------v~~~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~~~~~----- 365 (681)
T COG2216 326 ---------------------VSEEELADAAQLASLA--------------DETPEGRSIVELAKKLGIELREDD----- 365 (681)
T ss_pred ---------------------CCHHHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCCCccc-----
Confidence 0112333333333211 258899999999999986553311
Q ss_pred EEecCCCCCCCceeEEE-EeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcC
Q 002339 580 IRERYPPKGQPVEREFK-ILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658 (934)
Q Consensus 580 i~~~~~~~~~~~~~~~~-il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 658 (934)
.. --...||+.+.|+..+-.. ++ .-+-|||.+.|.......+...++.+....++.+..|
T Consensus 366 ---------------~~~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~G 426 (681)
T COG2216 366 ---------------LQSHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLG 426 (681)
T ss_pred ---------------ccccceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcC
Confidence 11 1345799988766555443 33 6678999999999998777778999999999999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEE
Q 002339 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (934)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ 738 (934)
-.+|+++ .|-.++|++.++|-+|+|.+|-+.+||+.|||.+
T Consensus 427 GTPL~V~---------------------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTv 467 (681)
T COG2216 427 GTPLVVV---------------------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTV 467 (681)
T ss_pred CCceEEE---------------------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEE
Confidence 9999999 4778999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhh
Q 002339 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (934)
Q Consensus 739 mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 818 (934)
|+|||++.||..||.+.|+.+
T Consensus 468 M~TGDN~~TAa~IA~EAGVDd----------------------------------------------------------- 488 (681)
T COG2216 468 MITGDNPLTAAAIAAEAGVDD----------------------------------------------------------- 488 (681)
T ss_pred EEeCCCHHHHHHHHHHhCchh-----------------------------------------------------------
Confidence 999999999999999999853
Q ss_pred HhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEE-cccchhhHHHh
Q 002339 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGMQAVMA 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam-~~~e~~~a~~~ 897 (934)
..++++|++|..+|+.-|. .|+.|+|+|||.||+|+|.+||||+|| +|+.. ||++
T Consensus 489 ---------------------fiAeatPEdK~~~I~~eQ~-~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqA--AkEA 544 (681)
T COG2216 489 ---------------------FIAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEA 544 (681)
T ss_pred ---------------------hhhcCChHHHHHHHHHHHh-cCcEEEEcCCCCCcchhhhhcchhhhhccccHH--HHHh
Confidence 5678999999999999998 899999999999999999999999999 57776 9999
Q ss_pred CcEeecCccc--hhhhHhhhchhh
Q 002339 898 SDFSIAQFRF--LERLLVVHGHWC 919 (934)
Q Consensus 898 AD~ii~~~~~--l~~lll~~Gr~~ 919 (934)
++.+=++-+. |... +.-|++.
T Consensus 545 aNMVDLDS~PTKliev-V~IGKql 567 (681)
T COG2216 545 ANMVDLDSNPTKLIEV-VEIGKQL 567 (681)
T ss_pred hcccccCCCccceehH-hhhhhhh
Confidence 9999777555 4444 4556544
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-31 Score=275.34 Aligned_cols=222 Identities=25% Similarity=0.356 Sum_probs=186.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhcc---ce-EEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCc
Q 002339 109 LAIVVGVSMAKEALEDWRRFMQDKEVNA---RK-VSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (934)
Q Consensus 109 l~~v~~~~~~~~~~~~~~r~k~~~~~n~---~~-~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G 184 (934)
++++++++.+.+.++++++++..+.+++ .+ ++|+ |||+++.++|++|+|||||+|++||.+||||+||+ +|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~-r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g 76 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVI-RDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEE-ETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SS
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEE-eccccccchHhhccceeeeecccccccccCcccee----cc
Confidence 5577788888899999999999887654 44 8898 89999999999999999999999999999999998 27
Q ss_pred eEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecC
Q 002339 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (934)
Q Consensus 185 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 264 (934)
.++||||.||||+.|+.|.+. +++..|++++||.+. +
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~-~ 113 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV-S 113 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-E
T ss_pred ccccccccccccccccccccc------------------------------------------cccccchhhcccccc-c
Confidence 799999999999999999863 456789999999999 8
Q ss_pred CeEEEEEEEeccchhhhhccC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCcc
Q 002339 265 AHVYGSVIFTGHDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (934)
Q Consensus 265 ~~~~gvVv~tG~~Tki~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 341 (934)
||++|+|++||.+|+++++.+ ..+.+++++++.++++..+++++.+++++++++++.++ .....|
T Consensus 114 g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------- 181 (230)
T PF00122_consen 114 GWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN---DSGISF--------- 181 (230)
T ss_dssp EEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG---STTCHC---------
T ss_pred cccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec---cccccc---------
Confidence 999999999999997655444 55667799999999999999999888888877665442 111123
Q ss_pred ccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccc
Q 002339 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEE 411 (934)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~ 411 (934)
...+..++.+++.++|++|+++++++...++.++ .++++++|+++.+|.
T Consensus 182 -----------~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 182 -----------FKSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp -----------CHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred -----------ccccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 2578889999999999999999999999999999 789999999999884
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-20 Score=195.82 Aligned_cols=97 Identities=29% Similarity=0.506 Sum_probs=90.2
Q ss_pred CceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHH
Q 002339 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKD 785 (934)
Q Consensus 706 dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 785 (934)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+++++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 788999999999999999999999999999999999999999999999999932
Q ss_pred hHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEc--ChhhH--HHHHHHHhhcCC
Q 002339 786 NILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRV--SPKQK--ALVTRLVKEGTG 861 (934)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~--~p~qK--~~iv~~lk~~~~ 861 (934)
..+++++ +|++| ..+++.++. .+
T Consensus 169 ----------------------------------------------------~~v~a~~~~kP~~k~~~~~i~~l~~-~~ 195 (215)
T PF00702_consen 169 ----------------------------------------------------SIVFARVIGKPEPKIFLRIIKELQV-KP 195 (215)
T ss_dssp ----------------------------------------------------EEEEESHETTTHHHHHHHHHHHHTC-TG
T ss_pred ----------------------------------------------------ccccccccccccchhHHHHHHHHhc-CC
Confidence 2388899 99999 999999995 45
Q ss_pred CEEEEEcCChhhHHHHHHcC
Q 002339 862 KTTLAIGDGANDVGMIQEAD 881 (934)
Q Consensus 862 ~~v~aiGDG~ND~~ml~~A~ 881 (934)
+.|+|+|||.||++|+++||
T Consensus 196 ~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 196 GEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp GGEEEEESSGGHHHHHHHSS
T ss_pred CEEEEEccCHHHHHHHHhCc
Confidence 69999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.3e-14 Score=125.07 Aligned_cols=126 Identities=23% Similarity=0.364 Sum_probs=108.4
Q ss_pred ceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHh
Q 002339 707 LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDN 786 (934)
Q Consensus 707 l~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 786 (934)
+...+.++---++=++|+++|++|++. ++++++|||.+-+....|.-.|+...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 567888888899999999999999999 99999999999999999999996421
Q ss_pred HHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEE
Q 002339 787 ILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLA 866 (934)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~a 866 (934)
-+++...|+.|+.+++.|++ +++.|+|
T Consensus 72 ----------------------------------------------------rv~a~a~~e~K~~ii~eLkk-~~~k~vm 98 (152)
T COG4087 72 ----------------------------------------------------RVFAGADPEMKAKIIRELKK-RYEKVVM 98 (152)
T ss_pred ----------------------------------------------------eeecccCHHHHHHHHHHhcC-CCcEEEE
Confidence 17888999999999999998 8999999
Q ss_pred EcCChhhHHHHHHcCccEEEcccch--hhHHHhCcEeecCccchhhhH
Q 002339 867 IGDGANDVGMIQEADIGIGISGVEG--MQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 867 iGDG~ND~~ml~~A~vGIam~~~e~--~~a~~~AD~ii~~~~~l~~ll 912 (934)
+|||+||..||+.||+||..-+.++ ..+..+||+++-+.+-+..++
T Consensus 99 VGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 99 VGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred ecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 9999999999999999996633233 226689999998877766654
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.3e-14 Score=124.14 Aligned_cols=90 Identities=36% Similarity=0.596 Sum_probs=71.4
Q ss_pred hhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceE
Q 002339 531 AICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRM 610 (934)
Q Consensus 531 ~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 610 (934)
++||++....+++..... ..|+|+|.||+.|+.++|..+... .....|++++.+||||+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~~----------------~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDIK----------------EIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcHH----------------HHHhhcceeEEEccCccccee
Confidence 589999886655433322 569999999999999997543211 136789999999999999999
Q ss_pred EEEEEcCCCcEEEEEcccchhhhHhhhc
Q 002339 611 SVIVRDEDGQILLLCKGADSIIFDRLSK 638 (934)
Q Consensus 611 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 638 (934)
+||++ .++.+++|+|||||.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3345788999999999999974
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.2e-11 Score=128.32 Aligned_cols=195 Identities=18% Similarity=0.197 Sum_probs=106.7
Q ss_pred CceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCC---------------
Q 002339 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL--------------- 770 (934)
Q Consensus 706 dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~--------------- 770 (934)
|.||+.- ...+-+.+.++|++|+++|++++++|||+...+..+.+++++..+....++.||.
T Consensus 11 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~ 87 (270)
T PRK10513 11 DGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTA 87 (270)
T ss_pred CCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecC
Confidence 4555531 2358899999999999999999999999999999999999874332233333332
Q ss_pred -CchhHHHHHHHHHHHhHHHH----------------HHHHHhh---hhc-----cC-CC--CCcEEEEEcChhhhHhhh
Q 002339 771 -NSDSVGKAAKEAVKDNILMQ----------------ITNASQM---IKL-----ER-DP--HAAYALIIEGKTLAYALE 822 (934)
Q Consensus 771 -~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~---~~~-----~~-~~--~~~~~lvi~g~~l~~~~~ 822 (934)
+.+.....+......++... ....... ... .. .. .....++.........+.
T Consensus 88 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 167 (270)
T PRK10513 88 LSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAAI 167 (270)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHHH
Confidence 11111111111111000000 0000000 000 00 00 000111222111000111
Q ss_pred HHHHHHHHh-hhhccCceEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHH
Q 002339 823 DDMKHHFLG-LAVECASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVM 896 (934)
Q Consensus 823 ~~~~~~~~~-~~~~~~~~i~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~ 896 (934)
.++...+.. .........+..++|. .|+..++.+.+..| ..|++||||.||++||+.|++||||+++... +|.
T Consensus 168 ~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~ 246 (270)
T PRK10513 168 ARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPS-VKE 246 (270)
T ss_pred HHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHH-HHH
Confidence 111111110 1101111134566665 69999998876544 6799999999999999999999999655433 999
Q ss_pred hCcEeecC
Q 002339 897 ASDFSIAQ 904 (934)
Q Consensus 897 ~AD~ii~~ 904 (934)
+||++..+
T Consensus 247 ~A~~vt~~ 254 (270)
T PRK10513 247 VAQFVTKS 254 (270)
T ss_pred hcCeeccC
Confidence 99999865
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.8e-10 Score=124.13 Aligned_cols=182 Identities=15% Similarity=0.126 Sum_probs=101.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCC---------------CchhHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL---------------NSDSVGKAAKEA 782 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~---------------~~~~~~~~~~~~ 782 (934)
.+.+.++++|++|+++|++++++|||+...+..+..++++.. .+++.||. +.+.....+...
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~ 95 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA---YLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQ 95 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC---cEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHh
Confidence 588999999999999999999999999999999999998742 22322222 112222222111
Q ss_pred HHHhHH---------------HHHHHHHhh----hhc---cC--CCCCcEEEEEcCh-hhhHhhhHHHHHHHHh-hhhcc
Q 002339 783 VKDNIL---------------MQITNASQM----IKL---ER--DPHAAYALIIEGK-TLAYALEDDMKHHFLG-LAVEC 836 (934)
Q Consensus 783 ~~~~~~---------------~~~~~~~~~----~~~---~~--~~~~~~~lvi~g~-~l~~~~~~~~~~~~~~-~~~~~ 836 (934)
...+.. ......... ... .. .......++.... .+. .+...+...+.. .....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~-~~~~~l~~~~~~~~~~~~ 174 (272)
T PRK15126 96 WDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLT-RLQIQLNEALGERAHLCF 174 (272)
T ss_pred hhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHH-HHHHHHHHHhcCCEEEEE
Confidence 110000 000000000 000 00 0000111111111 111 111122222211 11111
Q ss_pred CceEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcE--eecC
Q 002339 837 ASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDF--SIAQ 904 (934)
Q Consensus 837 ~~~i~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~--ii~~ 904 (934)
...-+..++|. .|+..++.+.+..| ..|++||||.||++||+.|+.||||+++... +|.+||+ ++.+
T Consensus 175 s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~-vK~~A~~~~v~~~ 248 (272)
T PRK15126 175 SATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQ-LRAELPHLPVIGH 248 (272)
T ss_pred cCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHH-HHHhCCCCeecCC
Confidence 11135567776 59999999977554 6799999999999999999999999765433 9999997 5543
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.6e-10 Score=121.28 Aligned_cols=189 Identities=16% Similarity=0.270 Sum_probs=104.4
Q ss_pred Eeeeeccc-CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhH-----HHHHHHHHH
Q 002339 711 GATAVEDK-LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV-----GKAAKEAVK 784 (934)
Q Consensus 711 G~i~i~D~-lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~-----~~~~~~~~~ 784 (934)
|.+.-.+. +.+.++++|+++++.|++++++|||+...+..+..++++.. .+++.||.-.... ...+.....
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~i~~~~l~~~~~ 88 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNGGELLFQKPLSREDV 88 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecCCcEEeeecCCHHHH
Confidence 44444554 89999999999999999999999999999999999999864 4444444321110 000111111
Q ss_pred HhHHHHHHHHHhh---hhcc--------C--C------------------CCCc-EEEEEc--ChhhhHhhhHHHHHHHH
Q 002339 785 DNILMQITNASQM---IKLE--------R--D------------------PHAA-YALIIE--GKTLAYALEDDMKHHFL 830 (934)
Q Consensus 785 ~~~~~~~~~~~~~---~~~~--------~--~------------------~~~~-~~lvi~--g~~l~~~~~~~~~~~~~ 830 (934)
..+.......... .... . . .... ..+.++ ...+... ...+.+.+.
T Consensus 89 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~ 167 (264)
T COG0561 89 EELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEEL-VEALRKRFP 167 (264)
T ss_pred HHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHH-HHHHhhhcc
Confidence 1111111000000 0000 0 0 0000 000111 1111111 111222221
Q ss_pred hhh--hccCceEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeec
Q 002339 831 GLA--VECASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIA 903 (934)
Q Consensus 831 ~~~--~~~~~~i~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~ 903 (934)
... .......+..+.|. .|+..++.+.+..| ..|+||||+.||++||+.|+.||||+++.. .+++.||++..
T Consensus 168 ~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~-~~k~~A~~vt~ 246 (264)
T COG0561 168 DLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADE-ELKELADYVTT 246 (264)
T ss_pred ccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCH-HHHhhCCcccC
Confidence 111 11111122455564 69988988877555 359999999999999999999999976632 29999997755
Q ss_pred C
Q 002339 904 Q 904 (934)
Q Consensus 904 ~ 904 (934)
.
T Consensus 247 ~ 247 (264)
T COG0561 247 S 247 (264)
T ss_pred C
Confidence 4
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.4e-10 Score=119.55 Aligned_cols=63 Identities=25% Similarity=0.275 Sum_probs=51.1
Q ss_pred EEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCc--EeecC
Q 002339 841 CCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASD--FSIAQ 904 (934)
Q Consensus 841 ~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD--~ii~~ 904 (934)
+..++|. .|+..++.+.+..| ..|++||||.||++||+.|+.||||+++... +|+.|| +++.+
T Consensus 181 ~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~~A~~~~v~~~ 250 (266)
T PRK10976 181 CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQR-LKDLLPELEVIGS 250 (266)
T ss_pred eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHH-HHHhCCCCeeccc
Confidence 5567775 69999998876554 6799999999999999999999999655443 899988 66654
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.3e-10 Score=119.81 Aligned_cols=188 Identities=19% Similarity=0.232 Sum_probs=107.0
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc------------CCceEEEEcCCCchhHHHHHHHHHH
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR------------QGMKQICITALNSDSVGKAAKEAVK 784 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~------------~~~~~i~~~~~~~~~~~~~~~~~~~ 784 (934)
.++.+++.++|++|+++|++++++|||.+..+..+..++++.. ...+++.....+.+.....+.....
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 3577999999999999999999999999999999999998751 1122222222222222233332222
Q ss_pred HhHHHHHHHHHhhhhc---------------------------cCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhh-hcc
Q 002339 785 DNILMQITNASQMIKL---------------------------ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA-VEC 836 (934)
Q Consensus 785 ~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~-~~~ 836 (934)
..+...+.+....+.. ......+.. ......-...+.+++...+.... ...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~-~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKIL-FFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEE-EESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeee-ccccchhhhhhhhhhccccCcceeEEE
Confidence 1100000000000000 000111111 22222222222334444443321 111
Q ss_pred CceEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 837 ASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 837 ~~~i~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
...-+..++|. .|+..++.+.+..| +.+++|||+.||.+||+.|+.||+|+++... ++..||+++..-+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~~~ 246 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPSNN 246 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESSGT
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecCCC
Confidence 11133445554 69988888876433 6899999999999999999999999655433 8999999988643
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.4e-10 Score=129.73 Aligned_cols=63 Identities=25% Similarity=0.390 Sum_probs=52.1
Q ss_pred EEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 841 CCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 841 ~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
+.++.|. .|+..++.+.+..| ..|+|||||.||++||+.|+.||||+++... +|+.||+|..+
T Consensus 498 ~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~ee-VK~~Ad~VT~s 565 (580)
T PLN02887 498 MLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEK-TKAVADVIGVS 565 (580)
T ss_pred EEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHH-HHHhCCEEeCC
Confidence 4566665 69999998887555 5799999999999999999999999655433 99999999865
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.7e-09 Score=113.09 Aligned_cols=179 Identities=14% Similarity=0.155 Sum_probs=98.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCc---h----hHHHHHHH-HHHHhHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNS---D----SVGKAAKE-AVKDNILM 789 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~---~----~~~~~~~~-~~~~~~~~ 789 (934)
.+.+.+.++|++|+++||+++++|||+...+..+++.+|+. ...+..++.-. . .....+.. ........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP---DPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC---CeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 47788999999999999999999999999999999999842 23444443310 0 00000000 00000000
Q ss_pred HHHHHHhhhhccC-CCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChh--hHHHHHHHHhhcCC---CE
Q 002339 790 QITNASQMIKLER-DPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK--QKALVTRLVKEGTG---KT 863 (934)
Q Consensus 790 ~~~~~~~~~~~~~-~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~--qK~~iv~~lk~~~~---~~ 863 (934)
.. .......... .......+.... ..+.. ..+.+.+......+....+..+.|. .|+..++.+.+..+ ..
T Consensus 92 ~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~ 167 (225)
T TIGR01482 92 KT-FPFSRLKVQYPRRASLVKMRYGI-DVDTV--REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGE 167 (225)
T ss_pred cc-cchhhhccccccccceEEEeecC-CHHHH--HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHH
Confidence 00 0000000000 001111222211 11110 1111222110000111234555553 78888888866444 57
Q ss_pred EEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 864 TLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 864 v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
+++|||+.||++|++.|++|++|++.... +|..||++..+
T Consensus 168 ~i~~GD~~NDi~m~~~ag~~vam~Na~~~-~k~~A~~vt~~ 207 (225)
T TIGR01482 168 TLVCGDSENDIDLFEVPGFGVAVANAQPE-LKEWADYVTES 207 (225)
T ss_pred EEEECCCHhhHHHHHhcCceEEcCChhHH-HHHhcCeecCC
Confidence 99999999999999999999999655433 89999999764
|
catalyze the same reaction as SPP. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.8e-09 Score=113.43 Aligned_cols=178 Identities=14% Similarity=0.136 Sum_probs=99.9
Q ss_pred ccc-CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCC-------chhHHHHHHHHHHHhH
Q 002339 716 EDK-LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALN-------SDSVGKAAKEAVKDNI 787 (934)
Q Consensus 716 ~D~-lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~ 787 (934)
.|+ +.+.+.++|++|+++|++++++|||+...+..+++.+|+.. .++..+|.- .......+. .. ..+
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~-~~-~~~ 91 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFLGDIE-EC-EKA 91 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEEcchH-HH-HHH
Confidence 444 77899999999999999999999999999999999998742 233333321 000000000 00 000
Q ss_pred HHHHHHHH----hhhhccCCCCCc-EEEEEcChhhhHhhhHHHHHHHHhhh---hccCceEEEEcChhh--HHHHHHHHh
Q 002339 788 LMQITNAS----QMIKLERDPHAA-YALIIEGKTLAYALEDDMKHHFLGLA---VECASVICCRVSPKQ--KALVTRLVK 857 (934)
Q Consensus 788 ~~~~~~~~----~~~~~~~~~~~~-~~lvi~g~~l~~~~~~~~~~~~~~~~---~~~~~~i~~r~~p~q--K~~iv~~lk 857 (934)
...+.... ..+......... ...+....... .....+.... .......+..+.|.. |+..++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~ 166 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVE-----EVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLA 166 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHH-----HHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHH
Confidence 11110000 000000000000 11111121111 1111111110 001111345666654 888888887
Q ss_pred hcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 858 EGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 858 ~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
+..+ ..+++|||+.||++|++.|++|++|++.... +|+.||++..+
T Consensus 167 ~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~-vk~~a~~v~~~ 215 (230)
T PRK01158 167 ELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEE-LKEAADYVTEK 215 (230)
T ss_pred HHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHH-HHHhcceEecC
Confidence 6433 5799999999999999999999999655443 89999999865
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.3e-08 Score=105.55 Aligned_cols=177 Identities=16% Similarity=0.224 Sum_probs=98.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCc----hh--HHHHHHHHHHHhHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNS----DS--VGKAAKEAVKDNILMQI 791 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~----~~--~~~~~~~~~~~~~~~~~ 791 (934)
++.+++.++|++|+++|++++++|||++..+..+++.+++.. .+++.+|.-. .. ................
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~- 93 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKK- 93 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcEEEecccchhhHHHhhhh-
Confidence 488999999999999999999999999999999999988642 2333332210 00 0000000000000000
Q ss_pred HHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcCh--hhHHHHHHHHhhcCC---CEEEE
Q 002339 792 TNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEGTG---KTTLA 866 (934)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~lk~~~~---~~v~a 866 (934)
........ .........+..++...... ...+.. ..+.... ...+..++| ..|+..++.+.+..+ ..+++
T Consensus 94 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~l~~--~~~~~~~-~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~ 168 (215)
T TIGR01487 94 RFPRDRLS-NEYPRASLVIMREGKDVDEV-REIIKE--RGLNLVD-SGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAA 168 (215)
T ss_pred hhhhhhcc-cccceeEEEEecCCccHHHH-HHHHHh--CCeEEEe-cCceEEEecCCCChHHHHHHHHHHhCCCHHHEEE
Confidence 00000000 00001112222333322211 111111 0111110 112345555 479988888876444 46999
Q ss_pred EcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 867 IGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 867 iGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
|||+.||++|++.|++|++|.+.... ++..||++...
T Consensus 169 iGDs~ND~~ml~~ag~~vam~na~~~-~k~~A~~v~~~ 205 (215)
T TIGR01487 169 IGDSENDIDLFRVVGFKVAVANADDQ-LKEIADYVTSN 205 (215)
T ss_pred ECCCHHHHHHHHhCCCeEEcCCccHH-HHHhCCEEcCC
Confidence 99999999999999999999654433 99999999864
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.5e-08 Score=103.48 Aligned_cols=122 Identities=21% Similarity=0.235 Sum_probs=91.3
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
.++.|++.+.++.++++|++||++||-...-+.++|+.+|+...-...+.....
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999997543332222110
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE-cChhhHHHHHHHHhhcCC---CEEEEEcCChh
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGTG---KTTLAIGDGAN 872 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~~p~qK~~iv~~lk~~~~---~~v~aiGDG~N 872 (934)
+++|. +..+ +..+.|...++.+.+..| +.+.|+|||.|
T Consensus 130 --------------~ltG~------------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~n 171 (212)
T COG0560 130 --------------KLTGR------------------------VVGPICDGEGKAKALRELAAELGIPLEETVAYGDSAN 171 (212)
T ss_pred --------------EEece------------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchh
Confidence 11221 3333 445788887766655344 46999999999
Q ss_pred hHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 873 DVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 873 D~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
|.|||+.|+.+|+++..+. ....|+..+..
T Consensus 172 Dlpml~~ag~~ia~n~~~~--l~~~a~~~~~~ 201 (212)
T COG0560 172 DLPMLEAAGLPIAVNPKPK--LRALADVRIWP 201 (212)
T ss_pred hHHHHHhCCCCeEeCcCHH--HHHHHHHhcCh
Confidence 9999999999999987766 55556554443
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=9.3e-09 Score=110.98 Aligned_cols=61 Identities=25% Similarity=0.434 Sum_probs=48.3
Q ss_pred EcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 843 RVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 843 r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
...|. .|+..++.+.+..| ..+++|||+.||++|++.|++||+|++... .++..||+++.+
T Consensus 192 ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~-~lk~~Ad~v~~~ 257 (272)
T PRK10530 192 DIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADD-AVKARADLVIGD 257 (272)
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchH-HHHHhCCEEEec
Confidence 44443 68888887765444 579999999999999999999999965433 388999999875
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1e-08 Score=111.47 Aligned_cols=132 Identities=24% Similarity=0.244 Sum_probs=94.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.+.|+.|++.|+++.++||.....+..+..++|+...-.+.+.
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~le------------------------------- 229 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELE------------------------------- 229 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEE-------------------------------
Confidence 4789999999999999999999999998888888888888431111110
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEE-EcChhhHHHHHHHHhhcCC---CEEEEEcCChhh
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICC-RVSPKQKALVTRLVKEGTG---KTTLAIGDGAND 873 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~-r~~p~qK~~iv~~lk~~~~---~~v~aiGDG~ND 873 (934)
+.+|.-- ..+.. -+..+.|...++.+.+..| ..++|||||.||
T Consensus 230 -------------i~dg~lt--------------------g~v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~ND 276 (322)
T PRK11133 230 -------------IMDGKLT--------------------GNVLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGAND 276 (322)
T ss_pred -------------EECCEEE--------------------eEecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHH
Confidence 1111000 00000 0234678888888765444 689999999999
Q ss_pred HHHHHHcCccEEEcccchhhHHHhCcEeecCccchhhhHhhhc
Q 002339 874 VGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFLERLLVVHG 916 (934)
Q Consensus 874 ~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~l~~lll~~G 916 (934)
++|++.|++||++++.+. +++.||+++. ...|..+|...|
T Consensus 277 l~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~-~~~l~~~l~~~~ 316 (322)
T PRK11133 277 LPMIKAAGLGIAYHAKPK--VNEQAQVTIR-HADLMGVLCILS 316 (322)
T ss_pred HHHHHHCCCeEEeCCCHH--HHhhCCEEec-CcCHHHHHHHhc
Confidence 999999999999977776 8999999996 555655554444
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.5e-08 Score=109.11 Aligned_cols=180 Identities=14% Similarity=0.166 Sum_probs=96.6
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCC---------------------CchhHHH
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL---------------------NSDSVGK 777 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~---------------------~~~~~~~ 777 (934)
+-+.++++|++|+++||+++++|||....+..+++++|+.. ...+..||. +.+....
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~--~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~ 102 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQG--LPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQ 102 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCC--CcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHH
Confidence 45779999999999999999999999999999999998731 123333332 1111111
Q ss_pred HHHHHHHH-hHH---------HHHHHHH----hhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHh--hhhccCceEE
Q 002339 778 AAKEAVKD-NIL---------MQITNAS----QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLG--LAVECASVIC 841 (934)
Q Consensus 778 ~~~~~~~~-~~~---------~~~~~~~----~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~--~~~~~~~~i~ 841 (934)
.+....+. .+. ....... ..............+.+.+..- .+ ..+...+.. +.... ...+
T Consensus 103 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~-~~~~ 178 (271)
T PRK03669 103 VLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDE--RM-AQFTARLAELGLQFVQ-GARF 178 (271)
T ss_pred HHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHH--HH-HHHHHHHHHCCCEEEe-cCee
Confidence 11111111 000 0000000 0000000000011122222110 00 112222221 11111 1125
Q ss_pred EEcChh--hHHHHHHHHhhcCC------CEEEEEcCChhhHHHHHHcCccEEEcc-c-chhh---HHHhCcEeecC
Q 002339 842 CRVSPK--QKALVTRLVKEGTG------KTTLAIGDGANDVGMIQEADIGIGISG-V-EGMQ---AVMASDFSIAQ 904 (934)
Q Consensus 842 ~r~~p~--qK~~iv~~lk~~~~------~~v~aiGDG~ND~~ml~~A~vGIam~~-~-e~~~---a~~~AD~ii~~ 904 (934)
..++|. .|+..++.+.++.| ..|++||||.||++||+.|++||||++ . +..+ .+..|||+...
T Consensus 179 iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~ 254 (271)
T PRK03669 179 WHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQR 254 (271)
T ss_pred EEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccC
Confidence 567774 69988888866433 579999999999999999999999963 3 2211 23468887765
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.1e-08 Score=102.10 Aligned_cols=113 Identities=19% Similarity=0.126 Sum_probs=85.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.+.|+.+++.| ++.++||-....+.++++.+|+...-...+.+....
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57899999999999975 999999999999999999999853111101000000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
.++|. .. ..+..|..+++.++. .+..++++|||.||++|+
T Consensus 121 -------------~~tG~------------------------~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs~nDl~ml 160 (203)
T TIGR02137 121 -------------RVVGY------------------------QL--RQKDPKRQSVIAFKS-LYYRVIAAGDSYNDTTML 160 (203)
T ss_pred -------------eeECe------------------------ee--cCcchHHHHHHHHHh-hCCCEEEEeCCHHHHHHH
Confidence 11111 11 346789999999976 677899999999999999
Q ss_pred HHcCccEEEcccchhhHHHhCc
Q 002339 878 QEADIGIGISGVEGMQAVMASD 899 (934)
Q Consensus 878 ~~A~vGIam~~~e~~~a~~~AD 899 (934)
+.||+||++.+++. .+++||
T Consensus 161 ~~Ag~~ia~~ak~~--~~~~~~ 180 (203)
T TIGR02137 161 SEAHAGILFHAPEN--VIREFP 180 (203)
T ss_pred HhCCCCEEecCCHH--HHHhCC
Confidence 99999999999887 666665
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.82 E-value=2e-08 Score=107.34 Aligned_cols=63 Identities=22% Similarity=0.436 Sum_probs=51.3
Q ss_pred EEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 841 CCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 841 ~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
+..++|. .|+..++.+.+..+ ..+++|||+.||++|++.|++|++|.+.... ++..||+++.+
T Consensus 179 ~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~-~k~~a~~~~~~ 246 (256)
T TIGR00099 179 SIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEE-LKALADYVTDS 246 (256)
T ss_pred eEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHH-HHHhCCEEecC
Confidence 4566665 59999998876543 5799999999999999999999999654332 89999999875
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.78 E-value=7.6e-08 Score=102.69 Aligned_cols=180 Identities=11% Similarity=0.111 Sum_probs=94.8
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc----cCCceEEEEcCC--------------CchhHHHHHH
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL----RQGMKQICITAL--------------NSDSVGKAAK 780 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~i~~~~~--------------~~~~~~~~~~ 780 (934)
.-+.+.++|++|+++|++++++|||....+..+.+++|+. ..++..+..... +.+.....+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 4457999999999999999999999999999999999863 233333322111 1111111111
Q ss_pred HHHHH-hHHHHHHHH------Hh-------hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHh--hhhccCceEEEEc
Q 002339 781 EAVKD-NILMQITNA------SQ-------MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLG--LAVECASVICCRV 844 (934)
Q Consensus 781 ~~~~~-~~~~~~~~~------~~-------~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~--~~~~~~~~i~~r~ 844 (934)
..... ++....... .. .............++. +..... .+...+.. +..... ..+..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~s-~~~~ei 170 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW-SEERRE----RFTEALVELGLEVTHG-NRFYHV 170 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-ChHHHH----HHHHHHHHcCCEEEeC-CceEEE
Confidence 11000 000000000 00 0000000011111222 221111 11112211 111111 124445
Q ss_pred Chh--hHHHHHHHHhhcC-----CCEEEEEcCChhhHHHHHHcCccEEEcccch--hhHHHh--C-cEeecC
Q 002339 845 SPK--QKALVTRLVKEGT-----GKTTLAIGDGANDVGMIQEADIGIGISGVEG--MQAVMA--S-DFSIAQ 904 (934)
Q Consensus 845 ~p~--qK~~iv~~lk~~~-----~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~--~~a~~~--A-D~ii~~ 904 (934)
.|. .|+..++.+.+.. ...+++|||+.||++|++.|++||||++... ..+|+. | +++...
T Consensus 171 ~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~ 242 (256)
T TIGR01486 171 LGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPA 242 (256)
T ss_pred ecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCC
Confidence 554 6887777776543 4679999999999999999999999976642 226775 4 476544
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.1e-07 Score=96.82 Aligned_cols=124 Identities=23% Similarity=0.292 Sum_probs=88.3
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++++.|+.|++.|+++.++||.....+..+.+.+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58999999999999999999999999999999999999885311111110000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE-cChhhHHHHHHHHhhcCC---CEEEEEcCChhh
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGTG---KTTLAIGDGAND 873 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~~p~qK~~iv~~lk~~~~---~~v~aiGDG~ND 873 (934)
.++|. +..+ ..+..|..+++.+.+..+ ..+++|||+.+|
T Consensus 138 -------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D 180 (219)
T TIGR00338 138 -------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGAND 180 (219)
T ss_pred -------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHH
Confidence 00000 1111 122346666665544232 468999999999
Q ss_pred HHHHHHcCccEEEcccchhhHHHhCcEeecCccc
Q 002339 874 VGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF 907 (934)
Q Consensus 874 ~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~ 907 (934)
+.|++.|++++++++.+. +.++||++|.+.++
T Consensus 181 i~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~~ 212 (219)
T TIGR00338 181 LSMIKAAGLGIAFNAKPK--LQQKADICINKKDL 212 (219)
T ss_pred HHHHHhCCCeEEeCCCHH--HHHhchhccCCCCH
Confidence 999999999999987766 78899999997654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.60 E-value=5.1e-07 Score=95.89 Aligned_cols=179 Identities=11% Similarity=0.119 Sum_probs=96.3
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCC-------chhH--HHHHHHHHHHh
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALN-------SDSV--GKAAKEAVKDN 786 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~-------~~~~--~~~~~~~~~~~ 786 (934)
..++.|.+.++|+++++.|++++++|||....+..+.+++++..++ -.+..+|.. .... ..........+
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 3467799999999999999999999999999999999988876543 222222221 1111 00011000001
Q ss_pred HHHHHHHHHhhhhc-c--CCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCce----EEEEcCh--hhHHHHHHHHh
Q 002339 787 ILMQITNASQMIKL-E--RDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASV----ICCRVSP--KQKALVTRLVK 857 (934)
Q Consensus 787 ~~~~~~~~~~~~~~-~--~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~----i~~r~~p--~qK~~iv~~lk 857 (934)
....+......... . .....+..+..+.......+ .++...+......+..+ -+..+.| ..|+..++.+.
T Consensus 98 ~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~ 176 (249)
T TIGR01485 98 IVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVI-KQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLL 176 (249)
T ss_pred HHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHH-HHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHH
Confidence 01111110011110 0 01112223333322211111 12222222211111111 1224555 47998899887
Q ss_pred hcCC---CEEEEEcCChhhHHHHHH-cCccEEEcccchhhHHHh
Q 002339 858 EGTG---KTTLAIGDGANDVGMIQE-ADIGIGISGVEGMQAVMA 897 (934)
Q Consensus 858 ~~~~---~~v~aiGDG~ND~~ml~~-A~vGIam~~~e~~~a~~~ 897 (934)
+..+ ..|+++||+.||++|++. ++.||+|.+.... ++..
T Consensus 177 ~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~-~k~~ 219 (249)
T TIGR01485 177 QKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEE-LLQW 219 (249)
T ss_pred HHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHH-HHHH
Confidence 6433 689999999999999998 6799999765442 5543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.3e-07 Score=89.88 Aligned_cols=98 Identities=11% Similarity=0.155 Sum_probs=74.0
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCC
Q 002339 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (934)
Q Consensus 725 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (934)
.+|+.|+++|+++.|+|+.+...+..+...+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 68999999999999999999999999999999852
Q ss_pred CCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcC--hhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCc
Q 002339 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVS--PKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADI 882 (934)
Q Consensus 805 ~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~--p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~v 882 (934)
+|.... |+--..+++.+.- ....+++|||+.||++|++.|++
T Consensus 76 -----------------------------------~f~~~kpkp~~~~~~~~~l~~-~~~ev~~iGD~~nDi~~~~~ag~ 119 (169)
T TIGR02726 76 -----------------------------------FHEGIKKKTEPYAQMLEEMNI-SDAEVCYVGDDLVDLSMMKRVGL 119 (169)
T ss_pred -----------------------------------EEecCCCCHHHHHHHHHHcCc-CHHHEEEECCCHHHHHHHHHCCC
Confidence 111111 2222233333321 33679999999999999999999
Q ss_pred cEEEcccchhhHHHhCcEeecC
Q 002339 883 GIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 883 GIam~~~e~~~a~~~AD~ii~~ 904 (934)
+++|.++... ++..|+++...
T Consensus 120 ~~am~nA~~~-lk~~A~~I~~~ 140 (169)
T TIGR02726 120 AVAVGDAVAD-VKEAAAYVTTA 140 (169)
T ss_pred eEECcCchHH-HHHhCCEEcCC
Confidence 9999765432 89999998864
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.55 E-value=5.7e-07 Score=94.74 Aligned_cols=174 Identities=14% Similarity=0.165 Sum_probs=92.4
Q ss_pred HHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCc--------hhHH-HHHHHH-HHHhHHHHHHH
Q 002339 724 PQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNS--------DSVG-KAAKEA-VKDNILMQITN 793 (934)
Q Consensus 724 ~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~--------~~~~-~~~~~~-~~~~~~~~~~~ 793 (934)
.++++ ++++|++++++|||....+..+...+++..++ .++..+|... +... ...... ....+......
T Consensus 21 ~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~-~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (236)
T TIGR02471 21 VELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPD-VLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALAD 98 (236)
T ss_pred HHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCC-EEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHhc
Confidence 36666 68999999999999999999999999874322 3333333311 1110 000000 00011111100
Q ss_pred HHhhhhccCCC---CCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEE----EEcChh--hHHHHHHHHhhcCC---
Q 002339 794 ASQMIKLERDP---HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVIC----CRVSPK--QKALVTRLVKEGTG--- 861 (934)
Q Consensus 794 ~~~~~~~~~~~---~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~----~r~~p~--qK~~iv~~lk~~~~--- 861 (934)
......+... ..+..+..+...... + .+....+.........+.. ..+.|. .|+..++.+.++.+
T Consensus 99 -~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~ 175 (236)
T TIGR02471 99 -IPGLTLQDDQEQGPFKISYLLDPEGEPI-L-PQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPL 175 (236)
T ss_pred -CCCcEeCChhcCCCeeEEEEECcccchH-H-HHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCH
Confidence 0000000111 122233333321111 1 1122222211111111111 245564 79999998876544
Q ss_pred CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCc----Eeec
Q 002339 862 KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASD----FSIA 903 (934)
Q Consensus 862 ~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD----~ii~ 903 (934)
..+++|||+.||++|++.|+.||+|++.... ++..|| ++..
T Consensus 176 ~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~~~~~~v~~ 220 (236)
T TIGR02471 176 EQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRHQQRIYFAN 220 (236)
T ss_pred HHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhcCCcEEEcC
Confidence 4689999999999999999999999765544 888999 6544
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.53 E-value=5.3e-07 Score=87.77 Aligned_cols=96 Identities=13% Similarity=0.177 Sum_probs=72.7
Q ss_pred HHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCC
Q 002339 726 CIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPH 805 (934)
Q Consensus 726 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (934)
+|+.|++.|+++.|+||+....+..+.+.+|+...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------------------
Confidence 89999999999999999999999999999887420
Q ss_pred CcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCChhhHHHHHHcCc
Q 002339 806 AAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEADI 882 (934)
Q Consensus 806 ~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~---~~~~v~aiGDG~ND~~ml~~A~v 882 (934)
+... ..|...+..+.+. ....++++||+.||++|++.|++
T Consensus 71 -----------------------------------~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~ 113 (154)
T TIGR01670 71 -----------------------------------YQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGL 113 (154)
T ss_pred -----------------------------------Eecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence 0000 2233333333222 23679999999999999999999
Q ss_pred cEEEcccchhhHHHhCcEeecC
Q 002339 883 GIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 883 GIam~~~e~~~a~~~AD~ii~~ 904 (934)
+++|.+.... .+..||+++..
T Consensus 114 ~~~v~~~~~~-~~~~a~~i~~~ 134 (154)
T TIGR01670 114 SVAVADAHPL-LIPRADYVTRI 134 (154)
T ss_pred eEecCCcCHH-HHHhCCEEecC
Confidence 9999654332 78889999975
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.6e-06 Score=93.46 Aligned_cols=50 Identities=12% Similarity=0.068 Sum_probs=41.7
Q ss_pred CceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 706 dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
|.|++.- ...+-+++.++|++|+++|++++++|||....+..+++++|+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 4555531 3356678999999999999999999999999999999999974
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.52 E-value=8.5e-07 Score=92.17 Aligned_cols=43 Identities=7% Similarity=0.027 Sum_probs=38.6
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.+..-+++.++|++|+++|++++++|||....+..+..++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556678999999999999999999999999999999999963
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.9e-07 Score=89.00 Aligned_cols=129 Identities=19% Similarity=0.311 Sum_probs=88.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCce--EEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMK--QICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (934)
.+-|++++..+.|++.|.+|.++||--...+.++|.++||...+.. .+.++
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd--------------------------- 140 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFD--------------------------- 140 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeec---------------------------
Confidence 4679999999999999999999999999999999999999642211 00000
Q ss_pred hhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc-CCCEEEEEcCChhhH
Q 002339 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG-TGKTTLAIGDGANDV 874 (934)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~-~~~~v~aiGDG~ND~ 874 (934)
-+|+-+..- . --.-+....|+++++.+++. ..+.++|||||+||.
T Consensus 141 ----------------~~Gk~~gfd----------------~--~~ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDl 186 (227)
T KOG1615|consen 141 ----------------KDGKYLGFD----------------T--NEPTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDL 186 (227)
T ss_pred ----------------cCCcccccc----------------c--CCccccCCccHHHHHHHHhCCChheeEEecCCcccc
Confidence 011100000 0 00002234799999999874 347899999999999
Q ss_pred HHHHHcCccEEEcccch-hhHHHhCcEeecCccc
Q 002339 875 GMIQEADIGIGISGVEG-MQAVMASDFSIAQFRF 907 (934)
Q Consensus 875 ~ml~~A~vGIam~~~e~-~~a~~~AD~ii~~~~~ 907 (934)
+|+..|+.=||..+... .+++..|++-+.+|..
T Consensus 187 ea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 187 EAMPPADAFIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred ccCCchhhhhccCCceEcHhhHhccHHHHHHHHH
Confidence 99999888777755322 2267777776665543
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.9e-06 Score=97.40 Aligned_cols=39 Identities=8% Similarity=-0.030 Sum_probs=35.7
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCc
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (934)
.-+.+.++|++|+++||+++++|||....+..+++++|+
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 445789999999999999999999999999999999985
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.4e-06 Score=87.60 Aligned_cols=113 Identities=15% Similarity=0.180 Sum_probs=80.4
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCC
Q 002339 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (934)
Q Consensus 725 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (934)
.+|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 69999999999999999999999999999998742
Q ss_pred CCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcC---CCEEEEEcCChhhHHHHHHcC
Q 002339 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEAD 881 (934)
Q Consensus 805 ~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~---~~~v~aiGDG~ND~~ml~~A~ 881 (934)
+|. ..+.|...++.+.+.. ...+++|||+.||+.|++.|+
T Consensus 90 -----------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG 132 (183)
T PRK09484 90 -----------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVG 132 (183)
T ss_pred -----------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCC
Confidence 010 1123443444333223 357999999999999999999
Q ss_pred ccEEEcccchhhHHHhCcEeecC------ccchhhhH-hhhchhhh
Q 002339 882 IGIGISGVEGMQAVMASDFSIAQ------FRFLERLL-VVHGHWCY 920 (934)
Q Consensus 882 vGIam~~~e~~~a~~~AD~ii~~------~~~l~~ll-l~~Gr~~~ 920 (934)
++++++..+. .++..||+++.. .+.+..++ ..-|+|-+
T Consensus 133 ~~~~v~~~~~-~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~~~ 177 (183)
T PRK09484 133 LSVAVADAHP-LLLPRADYVTRIAGGRGAVREVCDLLLLAQGKLDE 177 (183)
T ss_pred CeEecCChhH-HHHHhCCEEecCCCCCCHHHHHHHHHHHhcCChhh
Confidence 9998854433 267789999962 34455443 35555533
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.6e-06 Score=87.70 Aligned_cols=48 Identities=15% Similarity=0.137 Sum_probs=39.1
Q ss_pred CchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCC
Q 002339 721 KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL 770 (934)
Q Consensus 721 ~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~ 770 (934)
+.++++|++|+++|++++++|||+...+..+.+.+|+.. ...++.||.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~--~~~I~~NGa 66 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTG--DPYIAENGA 66 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC--CcEEEeCCc
Confidence 448999999999999999999999999999999999741 234444433
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.34 E-value=6.7e-06 Score=93.06 Aligned_cols=174 Identities=12% Similarity=0.105 Sum_probs=93.2
Q ss_pred chHHHH-HHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCce------EEEEcCC-Cchh-HHHHHHHHHHHh-HHHHH
Q 002339 722 GVPQCI-DKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMK------QICITAL-NSDS-VGKAAKEAVKDN-ILMQI 791 (934)
Q Consensus 722 ~~~~~I-~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~------~i~~~~~-~~~~-~~~~~~~~~~~~-~~~~~ 791 (934)
...+++ +++++.|+.++++|||....+..+.++.++..++.- .|..... ..+. ....+....... +...+
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 344555 888999999999999999999999999998776422 2222111 1111 111111100001 10111
Q ss_pred HHHHhhhhccC--CCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhcc----CceEEEEcChh--hHHHHHHHHhhcC---
Q 002339 792 TNASQMIKLER--DPHAAYALIIEGKTLAYALEDDMKHHFLGLAVEC----ASVICCRVSPK--QKALVTRLVKEGT--- 860 (934)
Q Consensus 792 ~~~~~~~~~~~--~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~----~~~i~~r~~p~--qK~~iv~~lk~~~--- 860 (934)
........... ....+..+..+...... +.+.+.+.+......+ ....+..+.|. .|+..++.|.+..
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~-~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~ 190 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQE-VIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAE 190 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHH-HHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhc
Confidence 10000000011 11122333333322222 1223333342211111 11134567775 5999999887654
Q ss_pred C---CEEEEEcCChhhHHHHHHcC-ccEEEcccchhhHHHh
Q 002339 861 G---KTTLAIGDGANDVGMIQEAD-IGIGISGVEGMQAVMA 897 (934)
Q Consensus 861 ~---~~v~aiGDG~ND~~ml~~A~-vGIam~~~e~~~a~~~ 897 (934)
| ..|++|||+.||++||+.|+ .||+|++.... +++.
T Consensus 191 gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~~ 230 (413)
T PLN02382 191 GKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQW 230 (413)
T ss_pred CCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHHH
Confidence 3 58999999999999999999 69999765443 5654
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=5e-06 Score=88.71 Aligned_cols=182 Identities=11% Similarity=0.073 Sum_probs=94.1
Q ss_pred cCCCchHHHHHHHHh-cCCeEEEEcCCCHHHHHHHHHHcCc--ccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQ-AGLKIWVLTGDKMETAINIGFACSL--LRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNA 794 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~-aGIkv~mlTGD~~~ta~~ia~~~gi--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (934)
.+-+++.++|++|++ .|++++++|||....+..+...+++ +..++..+.-.+... ....+.......+...+...
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~--~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKT--HIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCe--eeccCChhHHHHHHHHHHHH
Confidence 455789999999998 7999999999999999888876653 222222221110000 00001111111111111111
Q ss_pred HhhhhccCCCCCcEEEEEcChhhhHhhhH---HHHHHHHhhh---hccCceEEEEcChh--hHHHHHHHHhhcCC---CE
Q 002339 795 SQMIKLERDPHAAYALIIEGKTLAYALED---DMKHHFLGLA---VECASVICCRVSPK--QKALVTRLVKEGTG---KT 863 (934)
Q Consensus 795 ~~~~~~~~~~~~~~~lvi~g~~l~~~~~~---~~~~~~~~~~---~~~~~~i~~r~~p~--qK~~iv~~lk~~~~---~~ 863 (934)
........-.....+++........ ..+ ++...+.... ......-+.++.|. .|+..++.+.+..+ ..
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~ 192 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRT 192 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCe
Confidence 0000000001111222222211110 011 1111111110 01112233455554 79988887765443 68
Q ss_pred EEEEcCChhhHHHHHHc----CccEEEcccchhhHHHhCcEeecCccc
Q 002339 864 TLAIGDGANDVGMIQEA----DIGIGISGVEGMQAVMASDFSIAQFRF 907 (934)
Q Consensus 864 v~aiGDG~ND~~ml~~A----~vGIam~~~e~~~a~~~AD~ii~~~~~ 907 (934)
++++||+.||.+|++.+ +.||+|++.. ..|++.|.+-..
T Consensus 193 v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~-----~~A~~~l~~~~~ 235 (266)
T PRK10187 193 PVFVGDDLTDEAGFAVVNRLGGISVKVGTGA-----TQASWRLAGVPD 235 (266)
T ss_pred EEEEcCCccHHHHHHHHHhcCCeEEEECCCC-----CcCeEeCCCHHH
Confidence 99999999999999999 8999997554 358888887443
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=5.1e-06 Score=85.44 Aligned_cols=126 Identities=20% Similarity=0.194 Sum_probs=87.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++++.++.|+++ +++.++||.....+..+...+|+...-...+......
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 3579999999999999 9999999999999999999998842111111110000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
.+.|. . -..|..|...++.++. .+..++|||||.||+.|.
T Consensus 121 -------------~i~~~------------------------~--~~~p~~k~~~l~~~~~-~~~~~v~iGDs~~D~~~~ 160 (205)
T PRK13582 121 -------------MITGY------------------------D--LRQPDGKRQAVKALKS-LGYRVIAAGDSYNDTTML 160 (205)
T ss_pred -------------eEECc------------------------c--ccccchHHHHHHHHHH-hCCeEEEEeCCHHHHHHH
Confidence 00000 0 0236678888887776 678999999999999999
Q ss_pred HHcCccEEEcccchhhHHHhCcE-eecCccchhhh
Q 002339 878 QEADIGIGISGVEGMQAVMASDF-SIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGIam~~~e~~~a~~~AD~-ii~~~~~l~~l 911 (934)
+.|++|+..+..+.. ....+++ ++.++..|..+
T Consensus 161 ~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 161 GEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred HhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 999999987655432 2335565 66666655444
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.29 E-value=5.5e-06 Score=86.67 Aligned_cols=42 Identities=7% Similarity=-0.035 Sum_probs=38.1
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
+..-+.+.++|++|+++||.++++||+.......+.+++|+.
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 346677999999999999999999999999999999999974
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.5e-06 Score=89.22 Aligned_cols=57 Identities=25% Similarity=0.355 Sum_probs=43.8
Q ss_pred EEEcChh--hHHHHHHHHhhcCCCEEEEEcC----ChhhHHHHHHc-CccEEEcccchhhHHHhCc
Q 002339 841 CCRVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEA-DIGIGISGVEGMQAVMASD 899 (934)
Q Consensus 841 ~~r~~p~--qK~~iv~~lk~~~~~~v~aiGD----G~ND~~ml~~A-~vGIam~~~e~~~a~~~AD 899 (934)
+..++|. .|+..++.|.+. ...|++||| |.||++||+.| -.|+++++++.. ++..+.
T Consensus 179 ~leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~-~~~~~~ 242 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDT-IKILKE 242 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHH-HHHHHH
Confidence 4466664 799999999874 689999999 99999999977 577777666552 554443
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.23 E-value=7.7e-06 Score=83.78 Aligned_cols=118 Identities=22% Similarity=0.205 Sum_probs=79.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.+.|+.|++.|+++.++||.....+..+++.+|+...-...+.......
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~------------------------- 134 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGF------------------------- 134 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCe-------------------------
Confidence 5899999999999999999999999999999999999996421111111110000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcC---CCEEEEEcCChhhH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT---GKTTLAIGDGANDV 874 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~---~~~v~aiGDG~ND~ 874 (934)
..+ ..+....|..|..+++.+.+.. ...++++||+.+|+
T Consensus 135 --------------~~p------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~ 176 (201)
T TIGR01491 135 --------------IQP------------------------DGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDL 176 (201)
T ss_pred --------------Eec------------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHH
Confidence 000 0112234566776666654422 35799999999999
Q ss_pred HHHHHcCccEEEcccchhhHHHhCc
Q 002339 875 GMIQEADIGIGISGVEGMQAVMASD 899 (934)
Q Consensus 875 ~ml~~A~vGIam~~~e~~~a~~~AD 899 (934)
+|++.||++++++..... ...++|
T Consensus 177 ~~a~~ag~~~a~~~~~~~-~~~a~~ 200 (201)
T TIGR01491 177 PMFEVADISISLGDEGHA-DYLAKD 200 (201)
T ss_pred HHHHhcCCeEEECCCccc-hhhccc
Confidence 999999999999654331 344444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.21 E-value=7.8e-06 Score=84.02 Aligned_cols=167 Identities=18% Similarity=0.220 Sum_probs=86.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcC--cccCCceEEEEcCCCc-----hhHHHHHHHHHHHhHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACS--LLRQGMKQICITALNS-----DSVGKAAKEAVKDNILMQ 790 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~g--i~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~ 790 (934)
++.+.+.++|++|++.|++++++|||....+..+...++ ++..++..+...+... +.....+... ..+...
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 94 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIK--EEIGAE 94 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhh--hhcCce
Confidence 477899999999999999999999999999999888743 4444444443322111 1111111100 011000
Q ss_pred HHHHHhhhhcc--CCCCCcEEEEEcChhhhHhhhHHHHHHHHhhh-------hccCceEEEEcCh--hhHHHHHHHHhhc
Q 002339 791 ITNASQMIKLE--RDPHAAYALIIEGKTLAYALEDDMKHHFLGLA-------VECASVICCRVSP--KQKALVTRLVKEG 859 (934)
Q Consensus 791 ~~~~~~~~~~~--~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~-------~~~~~~i~~r~~p--~qK~~iv~~lk~~ 859 (934)
+......+... ........+...+..........+...+.... ......-+..+.| ..|+..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~ 174 (204)
T TIGR01484 95 LKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKE 174 (204)
T ss_pred eeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHH
Confidence 00000000000 00111112222221000011111222221111 0001112334556 4799888888764
Q ss_pred CC---CEEEEEcCChhhHHHHHHcCccEEE
Q 002339 860 TG---KTTLAIGDGANDVGMIQEADIGIGI 886 (934)
Q Consensus 860 ~~---~~v~aiGDG~ND~~ml~~A~vGIam 886 (934)
.+ ..++++||+.||.+|++.|++||+|
T Consensus 175 ~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 175 LNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred hCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 43 5699999999999999999999997
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.16 E-value=8.2e-06 Score=82.86 Aligned_cols=92 Identities=21% Similarity=0.291 Sum_probs=68.3
Q ss_pred CchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhc
Q 002339 721 KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKL 800 (934)
Q Consensus 721 ~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (934)
+++++.|+.++++|++++|+||.....+.++++.+|+.... ++.....+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~----------------------------- 140 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFD----------------------------- 140 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEEC-----------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeee-----------------------------
Confidence 67779999999999999999999999999999999986432 11111000
Q ss_pred cCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChh-h--HHHHHHHH------hhcCCCEEEEEcCCh
Q 002339 801 ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK-Q--KALVTRLV------KEGTGKTTLAIGDGA 871 (934)
Q Consensus 801 ~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~-q--K~~iv~~l------k~~~~~~v~aiGDG~ 871 (934)
.+ ......+.++. + |...++.+ +. ....++++|||.
T Consensus 141 ------------~~----------------------~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~-~~~~~~~iGDs~ 185 (192)
T PF12710_consen 141 ------------NG----------------------GGIFTGRITGSNCGGKAEALKELYIRDEEDI-DPDRVIAIGDSI 185 (192)
T ss_dssp ------------TT----------------------CCEEEEEEEEEEESHHHHHHHHHHHHHHHTH-TCCEEEEEESSG
T ss_pred ------------cc----------------------cceeeeeECCCCCCcHHHHHHHHHHHhhcCC-CCCeEEEEECCH
Confidence 00 01244555554 4 99999988 32 578999999999
Q ss_pred hhHHHHH
Q 002339 872 NDVGMIQ 878 (934)
Q Consensus 872 ND~~ml~ 878 (934)
||++|||
T Consensus 186 ~D~~~lr 192 (192)
T PF12710_consen 186 NDLPMLR 192 (192)
T ss_dssp GGHHHHH
T ss_pred HHHHHhC
Confidence 9999996
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.09 E-value=2e-05 Score=82.26 Aligned_cols=133 Identities=21% Similarity=0.326 Sum_probs=83.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCc--eEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGM--KQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (934)
++.|++.++++.|++.|+++.|+||.....+..++..+|+..... ..+.+....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g------------------------ 139 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG------------------------ 139 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC------------------------
Confidence 478999999999999999999999999999999999999852110 000110000
Q ss_pred hhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCC-CEEEEEcCChhhH
Q 002339 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG-KTTLAIGDGANDV 874 (934)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~-~~v~aiGDG~ND~ 874 (934)
.+.|.... ... ..+..|...++.+....+ +.+++|||+.||+
T Consensus 140 ---------------~~~g~~~~--------------------~~~--~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di 182 (224)
T PLN02954 140 ---------------EYAGFDEN--------------------EPT--SRSGGKAEAVQHIKKKHGYKTMVMIGDGATDL 182 (224)
T ss_pred ---------------cEECccCC--------------------Ccc--cCCccHHHHHHHHHHHcCCCceEEEeCCHHHH
Confidence 00000000 000 112347667776654333 5799999999999
Q ss_pred HHHHHcCccE--EEccc-chhhHHHhCcEeecCccchhhh
Q 002339 875 GMIQEADIGI--GISGV-EGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 875 ~ml~~A~vGI--am~~~-e~~~a~~~AD~ii~~~~~l~~l 911 (934)
.|.+.|++.+ +.++. ........+|+++.++..|..+
T Consensus 183 ~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 222 (224)
T PLN02954 183 EARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEV 222 (224)
T ss_pred HhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHh
Confidence 9988855544 44332 1111344689999887665543
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.7e-05 Score=82.05 Aligned_cols=141 Identities=12% Similarity=0.153 Sum_probs=86.1
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-+++|++.+.++.|++.|+++.|+||.....+..+...++... .++. +.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~-n~--------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYC-NE--------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEe-ce---------------------------
Confidence 4789999999999999999999999999988888887764321 1111 00
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceE-EEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVI-CCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i-~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
+.++|..+..... . .... +.......|..+++.++. ....++|||||.||+.
T Consensus 118 -------------~~~~~~~~~~~~p-~------------~~~~~~~~~cg~~K~~~l~~~~~-~~~~~i~iGDg~~D~~ 170 (214)
T TIGR03333 118 -------------ADFSNEYIHIDWP-H------------PCDGTCQNQCGCCKPSLIRKLSE-PNDYHIVIGDSVTDVE 170 (214)
T ss_pred -------------eEeeCCeeEEeCC-C------------CCccccccCCCCCHHHHHHHHhh-cCCcEEEEeCCHHHHH
Confidence 0111111100000 0 0000 001113579999998886 5678899999999999
Q ss_pred HHHHcCccEEEcc-cchhhHHHhCcEeecCccchhhhHhhh
Q 002339 876 MIQEADIGIGISG-VEGMQAVMASDFSIAQFRFLERLLVVH 915 (934)
Q Consensus 876 ml~~A~vGIam~~-~e~~~a~~~AD~ii~~~~~l~~lll~~ 915 (934)
|++.||++++-.. .+..+-...+.+.+.+|..+...|-.|
T Consensus 171 ~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~ 211 (214)
T TIGR03333 171 AAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELENV 211 (214)
T ss_pred HHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHHH
Confidence 9999999776431 111111222445555666665554333
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.0001 Score=90.51 Aligned_cols=185 Identities=14% Similarity=0.080 Sum_probs=96.4
Q ss_pred CCCchHHHHHHHHh-cCCeEEEEcCCCHHHHHHHHHHcC--cccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH
Q 002339 719 LQKGVPQCIDKLAQ-AGLKIWVLTGDKMETAINIGFACS--LLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (934)
Q Consensus 719 lr~~~~~~I~~l~~-aGIkv~mlTGD~~~ta~~ia~~~g--i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (934)
+-+++.++|++|.+ .|+.|+++|||............+ ++..++..+...+..-..... .....++.+...+....
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~-~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEP-VATEWKDAVRPILEEFV 593 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCC-cchhHHHHHHHHHHHHH
Confidence 56788999999999 699999999999998887765444 344444433322111000000 00001111111111111
Q ss_pred hhhhccCCCCCcEEEEEc--C--hhhhHhhhHHHHHHHHhhhhccCce-----EEEEcCh--hhHHHHHHHHhhc-CCCE
Q 002339 796 QMIKLERDPHAAYALIIE--G--KTLAYALEDDMKHHFLGLAVECASV-----ICCRVSP--KQKALVTRLVKEG-TGKT 863 (934)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~--g--~~l~~~~~~~~~~~~~~~~~~~~~~-----i~~r~~p--~qK~~iv~~lk~~-~~~~ 863 (934)
..............+... . ..+......++..++.......... -+..+.| -.|+..++.+.+. ....
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 111000001111222221 1 1222111223333333322111111 2234555 4799999988763 2368
Q ss_pred EEEEcCChhhHHHHHHc---CccEEEcccchhhHHHhCcEeecCccchh
Q 002339 864 TLAIGDGANDVGMIQEA---DIGIGISGVEGMQAVMASDFSIAQFRFLE 909 (934)
Q Consensus 864 v~aiGDG~ND~~ml~~A---~vGIam~~~e~~~a~~~AD~ii~~~~~l~ 909 (934)
++++||+.||.+|++.+ +.||+|++. ..+|+|.+.+-..+.
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~-----~s~A~~~l~~~~eV~ 717 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVGPG-----ESRARYRLPSQREVR 717 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEECCC-----CCcceEeCCCHHHHH
Confidence 99999999999999997 567777553 347999998754433
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.3e-05 Score=74.28 Aligned_cols=97 Identities=11% Similarity=0.203 Sum_probs=76.0
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCC
Q 002339 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (934)
Q Consensus 725 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (934)
-.|+.|.++||++.++|||+-.-+..=|+++||-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 58999999999999999999999999999999842
Q ss_pred CCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcC---CCEEEEEcCChhhHHHHHHcC
Q 002339 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEAD 881 (934)
Q Consensus 805 ~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~---~~~v~aiGDG~ND~~ml~~A~ 881 (934)
++ .=..+|....+.|.... -..|+++||-.||.|+|+..+
T Consensus 77 -----------------------------------~~--qG~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vG 119 (170)
T COG1778 77 -----------------------------------LY--QGISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVG 119 (170)
T ss_pred -----------------------------------ee--echHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcC
Confidence 11 11235554455444322 367999999999999999999
Q ss_pred ccEEEcccchhhHHHhCcEeecC
Q 002339 882 IGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 882 vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
++++..++... .++.|||++..
T Consensus 120 ls~a~~dAh~~-v~~~a~~Vt~~ 141 (170)
T COG1778 120 LSVAVADAHPL-LKQRADYVTSK 141 (170)
T ss_pred CcccccccCHH-HHHhhHhhhhc
Confidence 99999665543 88899999874
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.88 E-value=4.6e-05 Score=78.14 Aligned_cols=112 Identities=12% Similarity=0.007 Sum_probs=77.1
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (934)
..++.+++.+.|+.++++|++++++||-....+..+++.+|+..--...+......
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 55789999999999999999999999999999999999999842100000000000
Q ss_pred hhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCC---CEEEEEcCChh
Q 002339 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG---KTTLAIGDGAN 872 (934)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~---~~v~aiGDG~N 872 (934)
..+|... .-.+.++.|...++.+.+..+ ..++++||+.+
T Consensus 141 ---------------~~~g~~~-----------------------~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~ 182 (202)
T TIGR01490 141 ---------------IYTGNID-----------------------GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSIS 182 (202)
T ss_pred ---------------EEeCCcc-----------------------CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcc
Confidence 1111100 001345677776666543233 47899999999
Q ss_pred hHHHHHHcCccEEEccc
Q 002339 873 DVGMIQEADIGIGISGV 889 (934)
Q Consensus 873 D~~ml~~A~vGIam~~~ 889 (934)
|++|++.|+.+++++..
T Consensus 183 D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 183 DLPLLSLVGHPYVVNPD 199 (202)
T ss_pred cHHHHHhCCCcEEeCCC
Confidence 99999999999998643
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.84 E-value=7.3e-05 Score=74.81 Aligned_cols=40 Identities=15% Similarity=0.148 Sum_probs=37.6
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
+++++.+.++.+++.|++++++||.....+..++..+|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.80 E-value=7.3e-05 Score=70.79 Aligned_cols=43 Identities=21% Similarity=0.274 Sum_probs=39.8
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
..++.+++++.|++|++.|++++++||+....+......+|+.
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 4488999999999999999999999999999999999999874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.78 E-value=8.6e-05 Score=75.06 Aligned_cols=114 Identities=14% Similarity=0.130 Sum_probs=75.0
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-..++. +...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~-~~~~------------------------- 124 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYS-NPAS------------------------- 124 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEec-cCce-------------------------
Confidence 47899999999999999999999999999999998888887532112221 1000
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE-cChhhHHHHHHHHhhcC-CCEEEEEcCChhhH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGT-GKTTLAIGDGANDV 874 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~~p~qK~~iv~~lk~~~-~~~v~aiGDG~ND~ 874 (934)
.++...... +. . ....|.. .....|..+++.++. . ...+++||||.||+
T Consensus 125 ---------------~~~~g~~~~--------~~---~--~~~~~~~~~~g~~K~~~~~~~~~-~~~~~~i~iGD~~~D~ 175 (188)
T TIGR01489 125 ---------------FDNDGRHIV--------WP---H--HCHGCCSCPCGCCKGKVIHKLSE-PKYQHIIYIGDGVTDV 175 (188)
T ss_pred ---------------ECCCCcEEE--------ec---C--CCCccCcCCCCCCHHHHHHHHHh-hcCceEEEECCCcchh
Confidence 000000000 00 0 0001111 122358889998886 4 78899999999999
Q ss_pred HHHHHcCccEE
Q 002339 875 GMIQEADIGIG 885 (934)
Q Consensus 875 ~ml~~A~vGIa 885 (934)
.|.+.||+-.|
T Consensus 176 ~aa~~~d~~~a 186 (188)
T TIGR01489 176 CPAKLSDVVFA 186 (188)
T ss_pred chHhcCCcccc
Confidence 99999987543
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00013 Score=75.91 Aligned_cols=136 Identities=12% Similarity=0.161 Sum_probs=82.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
+++||+.+.|+.|++.|+++.|+||-....+..+.+.+ +.. ..++....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~---------------------------- 122 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGS---------------------------- 122 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEE----------------------------
Confidence 68999999999999999999999999998888888887 532 12221110
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEE-EcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICC-RVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~-r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~m 876 (934)
..+|..+..... + .....+ ......|..+++.++. ....+++||||.||+.|
T Consensus 123 -------------~~~~~~~~~~kp-~------------p~~~~~~~~~~~~K~~~l~~~~~-~~~~~i~iGDs~~Di~a 175 (219)
T PRK09552 123 -------------DFSGEYITITWP-H------------PCDEHCQNHCGCCKPSLIRKLSD-TNDFHIVIGDSITDLEA 175 (219)
T ss_pred -------------EecCCeeEEecc-C------------CccccccccCCCchHHHHHHhcc-CCCCEEEEeCCHHHHHH
Confidence 011111000000 0 000000 0012347788888876 56689999999999999
Q ss_pred HHHcCccEEEcc-cchhhHHHhCcEeecCccchhhh
Q 002339 877 IQEADIGIGISG-VEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 877 l~~A~vGIam~~-~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
.+.||+.++-.. .+.-.....+.+.+.+|..+...
T Consensus 176 a~~Ag~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~ 211 (219)
T PRK09552 176 AKQADKVFARDFLITKCEELGIPYTPFETFHDVQTE 211 (219)
T ss_pred HHHCCcceeHHHHHHHHHHcCCCccccCCHHHHHHH
Confidence 999999776321 01100112255556666655444
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00025 Score=74.05 Aligned_cols=123 Identities=22% Similarity=0.265 Sum_probs=82.4
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-++.|++.+.++.|++.|++++++||.....+..+.+.+|+...-..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 138 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--------------------------------- 138 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE---------------------------------
Confidence 46889999999999999999999999999999889888887432111
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcCh--hhHHHHHHHHhhcCCCEEEEEcCChhhH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEGTGKTTLAIGDGANDV 874 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~lk~~~~~~v~aiGDG~ND~ 874 (934)
++.+.. + .+..| +--..+++.+.. ....+++|||+.+|+
T Consensus 139 --------------~~~~~~-----------------------~-~~~kp~~~~~~~~~~~~~~-~~~~~i~igD~~~Di 179 (226)
T PRK13222 139 --------------VIGGDS-----------------------L-PNKKPDPAPLLLACEKLGL-DPEEMLFVGDSRNDI 179 (226)
T ss_pred --------------EEcCCC-----------------------C-CCCCcChHHHHHHHHHcCC-ChhheEEECCCHHHH
Confidence 111100 0 01112 111223333332 456899999999999
Q ss_pred HHHHHcCc-cEEEc-ccc--hhhHHHhCcEeecCccchhhh
Q 002339 875 GMIQEADI-GIGIS-GVE--GMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 875 ~ml~~A~v-GIam~-~~e--~~~a~~~AD~ii~~~~~l~~l 911 (934)
.|.+.|++ +|++. |.. .......+|+++.++..|...
T Consensus 180 ~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 220 (226)
T PRK13222 180 QAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPL 220 (226)
T ss_pred HHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHH
Confidence 99999998 66663 221 111345789999887776655
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00048 Score=71.51 Aligned_cols=126 Identities=21% Similarity=0.185 Sum_probs=85.7
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (934)
...+-|++++++..|+++|++..++|++....+..+.+..|+...-..++.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g----------------------------- 137 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG----------------------------- 137 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc-----------------------------
Confidence 557889999999999999999999999999999999999998653222111
Q ss_pred hhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
+... ....-.|.....+++.+.. ..+.++||||..+|+.
T Consensus 138 ------------------~~~~----------------------~~~KP~P~~l~~~~~~~~~-~~~~~l~VGDs~~Di~ 176 (220)
T COG0546 138 ------------------GDDV----------------------PPPKPDPEPLLLLLEKLGL-DPEEALMVGDSLNDIL 176 (220)
T ss_pred ------------------CCCC----------------------CCCCcCHHHHHHHHHHhCC-ChhheEEECCCHHHHH
Confidence 0000 0000123333444444443 2347999999999999
Q ss_pred HHHHcCcc-EEE--ccc-chhhHHHhCcEeecCccchhhh
Q 002339 876 MIQEADIG-IGI--SGV-EGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 876 ml~~A~vG-Iam--~~~-e~~~a~~~AD~ii~~~~~l~~l 911 (934)
|=+.|++. |++ +.. ...-....+|+++.+...|...
T Consensus 177 aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 177 AAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred HHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 99999944 344 322 2222455699999987776554
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00062 Score=71.91 Aligned_cols=66 Identities=9% Similarity=0.053 Sum_probs=48.1
Q ss_pred EcChhhHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHc--------CccEEEcccchhhHHHhCcEeecCccchhhh
Q 002339 843 RVSPKQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEA--------DIGIGISGVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 843 r~~p~qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A--------~vGIam~~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+-.+.+|+..++.+.+..+ ..++++||+.||..|++.+ ..||.|... . .+..|++++.+...+..+
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g-~--~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG-S--KKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC-C--cCCCceEeCCCHHHHHHH
Confidence 3445589988887765433 5799999999999999999 467777411 1 456799999886665544
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0004 Score=71.37 Aligned_cols=124 Identities=20% Similarity=0.205 Sum_probs=79.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.++|+.|+++|+++.++||.....+..+....|+...-..++.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~------------------------------- 123 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIG------------------------------- 123 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEe-------------------------------
Confidence 6789999999999999999999999988888888888887432111110
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
+... ...+-.|+-=..+++.+.- ....+++|||+.+|+.+-
T Consensus 124 ----------------~~~~----------------------~~~KP~~~~~~~~~~~~~~-~~~~~l~igD~~~Di~aA 164 (205)
T TIGR01454 124 ----------------SDEV----------------------PRPKPAPDIVREALRLLDV-PPEDAVMVGDAVTDLASA 164 (205)
T ss_pred ----------------cCcC----------------------CCCCCChHHHHHHHHHcCC-ChhheEEEcCCHHHHHHH
Confidence 0000 0000111111222333332 346799999999999999
Q ss_pred HHcCccE-EEc-c--cchhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIGI-GIS-G--VEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGI-am~-~--~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|++.. ++. | .........+|+++.++..|..+
T Consensus 165 ~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~ 202 (205)
T TIGR01454 165 RAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLAL 202 (205)
T ss_pred HHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHH
Confidence 9999864 442 2 22222456799999887665543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0007 Score=71.42 Aligned_cols=50 Identities=22% Similarity=0.376 Sum_probs=41.0
Q ss_pred EEEEcChh--hHHHHHHHHhhcCCCEEEEEcC----ChhhHHHHHH-cCccEEEcccch
Q 002339 840 ICCRVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQE-ADIGIGISGVEG 891 (934)
Q Consensus 840 i~~r~~p~--qK~~iv~~lk~~~~~~v~aiGD----G~ND~~ml~~-A~vGIam~~~e~ 891 (934)
.+..+.|. .|+..++.|+ ....|+|||| |.||.+||+. --.|+.+.+-+.
T Consensus 179 ~~iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 179 ISFDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 35566664 7999999998 5789999999 8999999997 557899987654
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00063 Score=73.08 Aligned_cols=120 Identities=18% Similarity=0.149 Sum_probs=79.3
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
.++.+++.++|+.|+++|++++|+||.....+..+....|+...-..
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~--------------------------------- 146 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRW--------------------------------- 146 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeE---------------------------------
Confidence 46789999999999999999999999988888877777776321111
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhH--HHHHHHHhhc---CCCEEEEEcCCh
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQK--ALVTRLVKEG---TGKTTLAIGDGA 871 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK--~~iv~~lk~~---~~~~v~aiGDG~ 871 (934)
++++...+..| ...++.+.+. ....+++|||+.
T Consensus 147 ------------------------------------------i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~ 184 (272)
T PRK13223 147 ------------------------------------------IIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSR 184 (272)
T ss_pred ------------------------------------------EEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCH
Confidence 11221122222 2222222221 346799999999
Q ss_pred hhHHHHHHcCcc-EEE-ccc--chhhHHHhCcEeecCccchhhh
Q 002339 872 NDVGMIQEADIG-IGI-SGV--EGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 872 ND~~ml~~A~vG-Iam-~~~--e~~~a~~~AD~ii~~~~~l~~l 911 (934)
||+.|.+.|++. +++ .|. ........+|+++.+...|..+
T Consensus 185 ~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~ 228 (272)
T PRK13223 185 SDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPG 228 (272)
T ss_pred HHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHH
Confidence 999999999984 455 232 1111334799999877666655
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0055 Score=75.55 Aligned_cols=201 Identities=11% Similarity=0.078 Sum_probs=97.9
Q ss_pred CceEEEeeeecccCCCchHHHHHHH-HhcCCeEEEEcCCCHHHHHHHHHH---cCcccCCceEEEEcCCCc-hhHHHHHH
Q 002339 706 DLILVGATAVEDKLQKGVPQCIDKL-AQAGLKIWVLTGDKMETAINIGFA---CSLLRQGMKQICITALNS-DSVGKAAK 780 (934)
Q Consensus 706 dl~~lG~i~i~D~lr~~~~~~I~~l-~~aGIkv~mlTGD~~~ta~~ia~~---~gi~~~~~~~i~~~~~~~-~~~~~~~~ 780 (934)
|.|++-.....-.+-+++.++|++| ++.|+.|+++|||...+....... ++++.+++..+...+... +.......
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~ 683 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVAD 683 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhh
Confidence 4455433222224557889999997 778999999999999998887754 345555554443322210 00000001
Q ss_pred HHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhh----hHhhhHHHHHHHHhhhhccCc-----eEEEEcCh--hhH
Q 002339 781 EAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTL----AYALEDDMKHHFLGLAVECAS-----VICCRVSP--KQK 849 (934)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l----~~~~~~~~~~~~~~~~~~~~~-----~i~~r~~p--~qK 849 (934)
...++.................-+.....++..-... .....+++..++......... .-+.++.| -.|
T Consensus 684 ~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnK 763 (854)
T PLN02205 684 CSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSK 763 (854)
T ss_pred HHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCH
Confidence 1111111000000000000000111233333332211 111112333333322211110 11223444 369
Q ss_pred HHHHHHHhhc---CC---CEEEEEcCChhhHHHHHHcC--------------ccEEEcccchhhHHHhCcEeecCccchh
Q 002339 850 ALVTRLVKEG---TG---KTTLAIGDGANDVGMIQEAD--------------IGIGISGVEGMQAVMASDFSIAQFRFLE 909 (934)
Q Consensus 850 ~~iv~~lk~~---~~---~~v~aiGDG~ND~~ml~~A~--------------vGIam~~~e~~~a~~~AD~ii~~~~~l~ 909 (934)
+..++.+.+. .| ..++++||+.||..|++.++ ++|.++..+ ..|.|-+.+-..+.
T Consensus 764 G~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~-----S~A~y~L~d~~eV~ 838 (854)
T PLN02205 764 GLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKP-----SKAKYYLDDTAEIV 838 (854)
T ss_pred HHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCC-----ccCeEecCCHHHHH
Confidence 9888887521 22 47999999999999999886 344444332 35667777755544
Q ss_pred hh
Q 002339 910 RL 911 (934)
Q Consensus 910 ~l 911 (934)
.+
T Consensus 839 ~l 840 (854)
T PLN02205 839 RL 840 (854)
T ss_pred HH
Confidence 44
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0013 Score=69.40 Aligned_cols=160 Identities=14% Similarity=0.193 Sum_probs=83.0
Q ss_pred HHhcCCeEEEEcCCCHHHHHHHHHHcCcccCC------ceEEEEcCCCchhHHHHHHHHHHH-----hHHHHHHHHHhhh
Q 002339 730 LAQAGLKIWVLTGDKMETAINIGFACSLLRQG------MKQICITALNSDSVGKAAKEAVKD-----NILMQITNASQMI 798 (934)
Q Consensus 730 l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~------~~~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 798 (934)
..+.++.++++|||+...+..+.++.++..++ +..|.. +.... ....+...... .+...+.......
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~-~~~~~-~d~~w~~~i~~~w~~~~v~~~l~~~~~l~ 108 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYY-GENWQ-PDEEWQAHIDERWDRERVEEILAELPGLR 108 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEE-SSTTE-E-HHHHHHHHTT--HHHHHHHHHCHCCEE
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEE-cCCCc-ChHHHHHHHHhcCChHHHHHHHHHhhCcc
Confidence 44778999999999999999999999976543 122222 11111 11122222211 1111111111111
Q ss_pred hccCC--CCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCce----EEEEcCh--hhHHHHHHHHhhcCC---CEEEEE
Q 002339 799 KLERD--PHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASV----ICCRVSP--KQKALVTRLVKEGTG---KTTLAI 867 (934)
Q Consensus 799 ~~~~~--~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~----i~~r~~p--~qK~~iv~~lk~~~~---~~v~ai 867 (934)
..... ...+....++.......+ +++...+......++.+ -+..+.| ..|...|+.++...+ ..|+++
T Consensus 109 ~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~a 187 (247)
T PF05116_consen 109 PQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVA 187 (247)
T ss_dssp EGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEE
T ss_pred cCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEE
Confidence 11111 122344445554433322 23444333322222211 2234555 379999999987533 578999
Q ss_pred cCChhhHHHHHHcCccEEEcccchh
Q 002339 868 GDGANDVGMIQEADIGIGISGVEGM 892 (934)
Q Consensus 868 GDG~ND~~ml~~A~vGIam~~~e~~ 892 (934)
||+.||.+||..++-||.+++.+..
T Consensus 188 GDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 188 GDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp ESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred eCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 9999999999999999999876653
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00097 Score=68.90 Aligned_cols=42 Identities=19% Similarity=0.206 Sum_probs=38.1
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.|++.++++.|+++|+++.++|+.....+..+.+..|+..
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 126 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK 126 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh
Confidence 578999999999999999999999999988888888888753
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0024 Score=65.59 Aligned_cols=110 Identities=15% Similarity=0.088 Sum_probs=75.8
Q ss_pred cCCCchHHHHH-HHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 718 KLQKGVPQCID-KLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 718 ~lr~~~~~~I~-~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
.+.|++.++|+ .++++|++++|+|+-....+.++|+..++.... .+++.+-.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57899999996 788899999999999999999999886664421 23322110
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~m 876 (934)
+.+|.. +..-.|..++|..-++..-........+-||+.||.||
T Consensus 147 --------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pm 190 (210)
T TIGR01545 147 --------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPL 190 (210)
T ss_pred --------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHH
Confidence 001100 01122556788765554322133456799999999999
Q ss_pred HHHcCccEEEcccc
Q 002339 877 IQEADIGIGISGVE 890 (934)
Q Consensus 877 l~~A~vGIam~~~e 890 (934)
|+.||..++++..+
T Consensus 191 L~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 191 LAFCEHRWRVSKRG 204 (210)
T ss_pred HHhCCCcEEECcch
Confidence 99999999997654
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.002 Score=74.23 Aligned_cols=97 Identities=14% Similarity=0.067 Sum_probs=71.7
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++++++.+.|++++++|++++++|+-....+..+++.+|+.+ .++..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~~--------------------------- 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDGT--------------------------- 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCCc---------------------------
Confidence 478999999999999999999999999999999999999832 22211100
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
.++.|+.|...+..... .+.+.++||..+|++|+
T Consensus 122 --------------------------------------------~~~kg~~K~~~l~~~l~--~~~~~yvGDS~~Dlp~~ 155 (479)
T PRK08238 122 --------------------------------------------TNLKGAAKAAALVEAFG--ERGFDYAGNSAADLPVW 155 (479)
T ss_pred --------------------------------------------cccCCchHHHHHHHHhC--ccCeeEecCCHHHHHHH
Confidence 02445567544332211 13367889999999999
Q ss_pred HHcCccEEEcccc
Q 002339 878 QEADIGIGISGVE 890 (934)
Q Consensus 878 ~~A~vGIam~~~e 890 (934)
+.|+-.++++...
T Consensus 156 ~~A~~av~Vn~~~ 168 (479)
T PRK08238 156 AAARRAIVVGASP 168 (479)
T ss_pred HhCCCeEEECCCH
Confidence 9999999997554
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0017 Score=67.97 Aligned_cols=124 Identities=18% Similarity=0.136 Sum_probs=79.3
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.+.++.|++.|+++.++|+.+...+..+-...|+...-..
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~---------------------------------- 140 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAV---------------------------------- 140 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccE----------------------------------
Confidence 5789999999999999999999999988877777777776431100
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
++.+... -...-.|+-=..+++.+.- ....+++|||+.+|+.|-
T Consensus 141 -------------i~~~~~~----------------------~~~KP~p~~~~~~~~~l~~-~p~~~l~IGDs~~Di~aA 184 (229)
T PRK13226 141 -------------LIGGDTL----------------------AERKPHPLPLLVAAERIGV-APTDCVYVGDDERDILAA 184 (229)
T ss_pred -------------EEecCcC----------------------CCCCCCHHHHHHHHHHhCC-ChhhEEEeCCCHHHHHHH
Confidence 1111000 0000111111233344432 457899999999999999
Q ss_pred HHcCccE-EEc-cc---chhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIGI-GIS-GV---EGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGI-am~-~~---e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|++.. ++. |. +.......+|+++.++..|...
T Consensus 185 ~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 185 RAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred HHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 9999875 442 22 1111234699999888776554
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0016 Score=67.41 Aligned_cols=42 Identities=17% Similarity=0.043 Sum_probs=37.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.|++.++|+.|+++|+++.++||.....+..+....|+..
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~ 123 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE 123 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 367999999999999999999999999988888888888753
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0024 Score=67.97 Aligned_cols=124 Identities=10% Similarity=0.101 Sum_probs=80.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.++|+.|+++|+++.|+|+.....+..+-..+|+...-..++.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~------------------------------- 157 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLA------------------------------- 157 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEe-------------------------------
Confidence 5689999999999999999999999999988888888887542212111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
+.... ...-.|+-=..+++.+.- ....+++|||..+|+.+=
T Consensus 158 ----------------~~d~~----------------------~~KP~Pe~~~~a~~~l~~-~p~~~l~IgDs~~Di~aA 198 (260)
T PLN03243 158 ----------------AEDVY----------------------RGKPDPEMFMYAAERLGF-IPERCIVFGNSNSSVEAA 198 (260)
T ss_pred ----------------cccCC----------------------CCCCCHHHHHHHHHHhCC-ChHHeEEEcCCHHHHHHH
Confidence 11000 000011111122233332 346799999999999999
Q ss_pred HHcCccE-EEcccchhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIGI-GISGVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGI-am~~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|++-+ ++.+.........+|+++.+++.|...
T Consensus 199 ~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 199 HDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred HHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHH
Confidence 9999854 554433222344689999887766544
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0039 Score=66.74 Aligned_cols=42 Identities=17% Similarity=0.164 Sum_probs=38.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.|++.++|+.|++.|+++.|+|+.....+..+-+.+|+..
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~ 183 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS 183 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 577999999999999999999999999999999988888853
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.013 Score=65.00 Aligned_cols=67 Identities=21% Similarity=0.225 Sum_probs=48.1
Q ss_pred EEcCh---hhHHHHHHHHhhcCC---C---EEEEEcCChhhHHHHHH-----cCccEEEcccchhhHHHhCcEeecCccc
Q 002339 842 CRVSP---KQKALVTRLVKEGTG---K---TTLAIGDGANDVGMIQE-----ADIGIGISGVEGMQAVMASDFSIAQFRF 907 (934)
Q Consensus 842 ~r~~p---~qK~~iv~~lk~~~~---~---~v~aiGDG~ND~~ml~~-----A~vGIam~~~e~~~a~~~AD~ii~~~~~ 907 (934)
.++.| -+|+..|+.+.+..+ . .+++|||+.||..|++. +++||+|++... .-.|+|-|.+-..
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~e 368 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSE 368 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHH
Confidence 45555 389999998876443 1 24899999999999996 588998864322 2268899888655
Q ss_pred hhhh
Q 002339 908 LERL 911 (934)
Q Consensus 908 l~~l 911 (934)
+..+
T Consensus 369 V~~~ 372 (384)
T PLN02580 369 VMEF 372 (384)
T ss_pred HHHH
Confidence 5554
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0055 Score=63.15 Aligned_cols=111 Identities=12% Similarity=0.066 Sum_probs=76.9
Q ss_pred cCCCchHHHH-HHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 718 KLQKGVPQCI-DKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 718 ~lr~~~~~~I-~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
.+.|++.++| +.+++.|++++++|+-....+..++..+|+.. ...+++..-.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4589999999 57888999999999999999999999998632 2223322110
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~m 876 (934)
...+|.- ....+..+.|..-++..-........+-||+.||.||
T Consensus 148 -------------~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pm 191 (211)
T PRK11590 148 -------------RRYGGWV-----------------------LTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPL 191 (211)
T ss_pred -------------EEEccEE-----------------------CCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHH
Confidence 0111210 1122556788765554321134566799999999999
Q ss_pred HHHcCccEEEcccch
Q 002339 877 IQEADIGIGISGVEG 891 (934)
Q Consensus 877 l~~A~vGIam~~~e~ 891 (934)
|+.|+-.++++..+.
T Consensus 192 L~~a~~~~~vnp~~~ 206 (211)
T PRK11590 192 LYFCQHRWRVTPRGE 206 (211)
T ss_pred HHhCCCCEEECccHH
Confidence 999999999976553
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0022 Score=66.71 Aligned_cols=43 Identities=19% Similarity=0.172 Sum_probs=38.7
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
-++-|++.++|+.|++.|+++.++||.....+..+.+.+|+..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 133 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD 133 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh
Confidence 4678999999999999999999999999998888888888754
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0059 Score=59.42 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=31.5
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHH
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~ 749 (934)
+|.+.+++++++++++++|++++++|||....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988774
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0034 Score=66.26 Aligned_cols=47 Identities=15% Similarity=0.240 Sum_probs=41.8
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCce
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMK 763 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~ 763 (934)
-+++||+.+.++.|++.|+++.++||-....+..+.+++|+......
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~ 166 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVK 166 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCce
Confidence 35799999999999999999999999999999999999998765543
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0048 Score=64.05 Aligned_cols=42 Identities=19% Similarity=0.163 Sum_probs=38.6
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.++.+|+.+.|+.|++.|+++.++||-....+..+...+|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 478999999999999999999999999999999888888875
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0047 Score=64.04 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=73.7
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.||+.++|+.|+++|+++.++|+.....+...-...|+... ..
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-~~---------------------------------- 127 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-EV---------------------------------- 127 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-cE----------------------------------
Confidence 5789999999999999999999999877666555555555211 11
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChh--hHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK--QKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~--qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
++++... .+.-|. -=..+.+.+.- ....+++|||..+|+.
T Consensus 128 -------------i~~~~~~------------------------~~~KP~p~~~~~~~~~~g~-~p~~~l~igDs~~di~ 169 (218)
T PRK11587 128 -------------FVTAERV------------------------KRGKPEPDAYLLGAQLLGL-APQECVVVEDAPAGVL 169 (218)
T ss_pred -------------EEEHHHh------------------------cCCCCCcHHHHHHHHHcCC-CcccEEEEecchhhhH
Confidence 1111000 001121 11122222322 3478999999999999
Q ss_pred HHHHcCcc-EEEcccchhhHHHhCcEeecCccch
Q 002339 876 MIQEADIG-IGISGVEGMQAVMASDFSIAQFRFL 908 (934)
Q Consensus 876 ml~~A~vG-Iam~~~e~~~a~~~AD~ii~~~~~l 908 (934)
+=+.|++- |++...........+|+++.+++.|
T Consensus 170 aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 170 SGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred HHHHCCCEEEEECCCCchhhhccCCEEecchhhe
Confidence 99999985 5664322211344689988876654
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.059 Score=59.24 Aligned_cols=197 Identities=13% Similarity=0.106 Sum_probs=98.9
Q ss_pred CceEEEeeeecc--cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchh-----H---
Q 002339 706 DLILVGATAVED--KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDS-----V--- 775 (934)
Q Consensus 706 dl~~lG~i~i~D--~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~-----~--- 775 (934)
|.||+-++.-.| .+-+++.++|++|. .|++++++|||....+..+. ++ .+..++..+|..... .
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~---~l--~~l~l~g~hGa~i~~p~~~~~~~~ 192 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV---KL--AELYYAGSHGMDIKGPAKGFSRHK 192 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh---cc--cCceEEEcCCcEEecCCCcceecc
Confidence 666665554334 37789999999999 78999999999999988873 22 122333333321100 0
Q ss_pred -------HHHH--HHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhh--------hccCc
Q 002339 776 -------GKAA--KEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA--------VECAS 838 (934)
Q Consensus 776 -------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~--------~~~~~ 838 (934)
.... .....+.+...+...........-+...+++.+.-.........++..++.... ...+.
T Consensus 193 ~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~Gkk 272 (366)
T PLN03017 193 RVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRK 272 (366)
T ss_pred ccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCe
Confidence 0000 000011111111111111111111223344443322221111112222222111 11223
Q ss_pred eEEEEcC-hhhHHHHHHHHhhcCC------CEEEEEcCChhhHHHHHHcC-----ccEEEcccchhhHHHhCcEeecCcc
Q 002339 839 VICCRVS-PKQKALVTRLVKEGTG------KTTLAIGDGANDVGMIQEAD-----IGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 839 ~i~~r~~-p~qK~~iv~~lk~~~~------~~v~aiGDG~ND~~ml~~A~-----vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
++-.|-. .-+|+..++.+.+..+ ..++++||...|-.|++... +||.++..+. ...|+|.|.+-.
T Consensus 273 VlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~dp~ 349 (366)
T PLN03017 273 VFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQDPS 349 (366)
T ss_pred EEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCCHH
Confidence 3333322 2489999998876432 36899999999999999763 4444442222 247889998755
Q ss_pred chhhh
Q 002339 907 FLERL 911 (934)
Q Consensus 907 ~l~~l 911 (934)
.+..+
T Consensus 350 eV~~f 354 (366)
T PLN03017 350 EVMDF 354 (366)
T ss_pred HHHHH
Confidence 54444
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0099 Score=65.89 Aligned_cols=122 Identities=11% Similarity=0.159 Sum_probs=80.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
.+.+|+.+.|+.|+++|+++.++|+.....+..+-...||...-..++
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv-------------------------------- 263 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIV-------------------------------- 263 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEE--------------------------------
Confidence 467999999999999999999999999999999988888854221111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhH--HHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQK--ALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK--~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
.+... .+--|.-. ...++.+.- ....+++|||...|+.
T Consensus 264 ---------------~sddv------------------------~~~KP~Peifl~A~~~lgl-~Peecl~IGDS~~DIe 303 (381)
T PLN02575 264 ---------------AAEDV------------------------YRGKPDPEMFIYAAQLLNF-IPERCIVFGNSNQTVE 303 (381)
T ss_pred ---------------ecCcC------------------------CCCCCCHHHHHHHHHHcCC-CcccEEEEcCCHHHHH
Confidence 11100 00112111 122333332 4578999999999999
Q ss_pred HHHHcCccE-EEcccchhhHHHhCcEeecCccchhhh
Q 002339 876 MIQEADIGI-GISGVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 876 ml~~A~vGI-am~~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+-+.|++-. ++.+.........||+++.++..|...
T Consensus 304 AAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~ 340 (381)
T PLN02575 304 AAHDARMKCVAVASKHPIYELGAADLVVRRLDELSIV 340 (381)
T ss_pred HHHHcCCEEEEECCCCChhHhcCCCEEECCHHHHHHH
Confidence 999999865 554322211223589999888776433
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.01 Score=63.17 Aligned_cols=42 Identities=26% Similarity=0.182 Sum_probs=37.3
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++-||+.+.|+.|+++|+++.++||.....+..+-+.+|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 467999999999999999999999999998888888887754
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0012 Score=53.60 Aligned_cols=45 Identities=24% Similarity=0.225 Sum_probs=38.5
Q ss_pred CcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcc
Q 002339 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVT 95 (934)
Q Consensus 48 ~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~ 95 (934)
..++.+||.|.+..++...++ +.+++||.+|+.++++++++++++
T Consensus 17 ~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 17 ARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 467889999999988754443 889999999999999999999886
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.014 Score=67.92 Aligned_cols=121 Identities=14% Similarity=0.155 Sum_probs=80.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.||+.+.|+.|++.|+++.++|+.....+..+...+|+...-..++
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~-------------------------------- 377 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETF-------------------------------- 377 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeE--------------------------------
Confidence 678999999999999999999999999999999988888754211111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
++.... ..-.|+ -+...+++.....+++|||+.+|+.+-
T Consensus 378 ---------------~~d~v~-----------------------~~~kP~---~~~~al~~l~~~~~v~VGDs~~Di~aA 416 (459)
T PRK06698 378 ---------------SIEQIN-----------------------SLNKSD---LVKSILNKYDIKEAAVVGDRLSDINAA 416 (459)
T ss_pred ---------------ecCCCC-----------------------CCCCcH---HHHHHHHhcCcceEEEEeCCHHHHHHH
Confidence 110000 001121 122222222336799999999999999
Q ss_pred HHcCcc-EEEc-ccchhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIG-IGIS-GVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vG-Iam~-~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|++- |++. +.........+|+++.+++.|..+
T Consensus 417 k~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~ 452 (459)
T PRK06698 417 KDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGI 452 (459)
T ss_pred HHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHH
Confidence 999984 4552 221111234689999888777665
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.015 Score=61.68 Aligned_cols=42 Identities=21% Similarity=0.071 Sum_probs=38.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.|++.++++.|++.|+++.++|+-....+..+-+.+|+..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 149 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD 149 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 467999999999999999999999999999998888888854
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0066 Score=63.12 Aligned_cols=41 Identities=17% Similarity=0.146 Sum_probs=35.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCC----CHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGD----KMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD----~~~ta~~ia~~~gi~ 758 (934)
.+.+++++.|+.++++|+++.++|++ ...++..+.+.+|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 34455999999999999999999999 667899999889984
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.014 Score=59.33 Aligned_cols=44 Identities=20% Similarity=0.090 Sum_probs=39.0
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
.+++.++++++|+.|++.|+++.++||.....+..+.+.+|+..
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~ 147 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI 147 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh
Confidence 45577788999999999999999999999999999999998853
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.01 Score=61.68 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=35.3
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCC----HHHHHHHHHHcCc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDK----METAINIGFACSL 757 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~----~~ta~~ia~~~gi 757 (934)
-.+.+++++.|+.|++.|+++.++|||. ..++..+.+..|+
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 3467889999999999999999999985 4588888887888
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0011 Score=54.60 Aligned_cols=44 Identities=32% Similarity=0.396 Sum_probs=36.8
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHh
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLS 93 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~ 93 (934)
...|+.+||+|.+...+...++ +.++++|.+|++++++++++++
T Consensus 26 v~~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 26 VEERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 3467889999999766665554 8999999999999999999885
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.016 Score=62.71 Aligned_cols=38 Identities=24% Similarity=0.278 Sum_probs=32.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (934)
++.||+.+.|+.|++.|+++.++|+-....+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998877766554443
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.027 Score=60.43 Aligned_cols=41 Identities=24% Similarity=0.128 Sum_probs=35.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++-||+.++|+.|++.|+++.++||.....+..+-+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56799999999999999999999999888777776666654
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.022 Score=56.60 Aligned_cols=41 Identities=22% Similarity=0.245 Sum_probs=31.8
Q ss_pred cCceEEEeeeecc----cCCCchHHHHHHHHhcCCeEEEEcCCCH
Q 002339 705 KDLILVGATAVED----KLQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (934)
Q Consensus 705 ~dl~~lG~i~i~D----~lr~~~~~~I~~l~~aGIkv~mlTGD~~ 745 (934)
+|.++.|-..+.+ ++.|+++++|+.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4666655544442 3679999999999999999999998753
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.027 Score=58.44 Aligned_cols=41 Identities=12% Similarity=0.130 Sum_probs=36.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.|++.++|+.|+++|++++++|+-....+......+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 57899999999999999999999998887777777777764
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.021 Score=53.94 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=34.8
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCC--------HHHHHHHHHHcCc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDK--------METAINIGFACSL 757 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~--------~~ta~~ia~~~gi 757 (934)
-++.+++.++|+.|+++|++++++|+.. ...+..+...+|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999988 6666667777666
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.017 Score=63.16 Aligned_cols=44 Identities=20% Similarity=0.086 Sum_probs=40.6
Q ss_pred ecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 715 i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
..+++.+++.++|+.|++.|++++++||+....+..+.+.+|+.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 56789999999999999999999999999999999998888774
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.037 Score=54.83 Aligned_cols=58 Identities=24% Similarity=0.331 Sum_probs=42.6
Q ss_pred hHHHHHHHHhhcCC--CEEEEEcCChhhHHHHHHcC----ccEEEcccchhhHHHhCcEeecCccc
Q 002339 848 QKALVTRLVKEGTG--KTTLAIGDGANDVGMIQEAD----IGIGISGVEGMQAVMASDFSIAQFRF 907 (934)
Q Consensus 848 qK~~iv~~lk~~~~--~~v~aiGDG~ND~~ml~~A~----vGIam~~~e~~~a~~~AD~ii~~~~~ 907 (934)
.|+++++.+....+ ...+.+||+..|+.||+.+. +.|+.+|++- |...||+.+..-..
T Consensus 191 ~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvisp~~ 254 (315)
T COG4030 191 EKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVISPTA 254 (315)
T ss_pred chhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEeccch
Confidence 46666666554322 23588999999999999985 4456688888 99999998876443
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.029 Score=63.25 Aligned_cols=41 Identities=12% Similarity=0.025 Sum_probs=33.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHH-HcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF-ACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~-~~gi~ 758 (934)
++.+|+.+.++.|++.|+++.|+|+.....+..... ..|+.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~ 134 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK 134 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH
Confidence 467999999999999999999999998877765544 45553
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.042 Score=55.03 Aligned_cols=52 Identities=15% Similarity=0.114 Sum_probs=35.7
Q ss_pred CCCEEEEEcCChhhHHHHHHcCccE-EE-cccchh-hHHHhC--cEeecCccchhhh
Q 002339 860 TGKTTLAIGDGANDVGMIQEADIGI-GI-SGVEGM-QAVMAS--DFSIAQFRFLERL 911 (934)
Q Consensus 860 ~~~~v~aiGDG~ND~~ml~~A~vGI-am-~~~e~~-~a~~~A--D~ii~~~~~l~~l 911 (934)
....+++|||+.+|+.+-+.|++.. ++ .|.... .....+ |+++.++..+..+
T Consensus 119 ~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 119 DLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred ChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 3478999999999999999999854 44 232211 122345 8888887766655
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.042 Score=57.20 Aligned_cols=41 Identities=15% Similarity=0.058 Sum_probs=35.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.+|+.+.++.|+++|+++.++|+-....+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 57899999999999999999999998887777766667764
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.044 Score=55.76 Aligned_cols=41 Identities=15% Similarity=0.181 Sum_probs=36.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.|++.++|+.|+++|++++++|+-+...+..+...+|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 47799999999999999999999998888888888888874
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.029 Score=55.36 Aligned_cols=44 Identities=14% Similarity=0.168 Sum_probs=40.1
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
..++.+++.+.|+.|++.|++++++|+.....+....+.+|+..
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~ 118 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD 118 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc
Confidence 55788999999999999999999999999999999999998863
|
... |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.038 Score=57.36 Aligned_cols=48 Identities=10% Similarity=0.094 Sum_probs=33.9
Q ss_pred CCEEEEEcCChhhHHHHHHcCccE-EEc-ccchhhHHHhCcEeecCccch
Q 002339 861 GKTTLAIGDGANDVGMIQEADIGI-GIS-GVEGMQAVMASDFSIAQFRFL 908 (934)
Q Consensus 861 ~~~v~aiGDG~ND~~ml~~A~vGI-am~-~~e~~~a~~~AD~ii~~~~~l 908 (934)
...+++|||+..|+.+-+.|++-. ++. +.........+|+++.++..+
T Consensus 157 ~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~ 206 (220)
T PLN02811 157 PGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDF 206 (220)
T ss_pred ccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhC
Confidence 467999999999999999999865 442 322211234688888776543
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.16 Score=50.50 Aligned_cols=37 Identities=8% Similarity=0.137 Sum_probs=32.5
Q ss_pred chHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 722 GVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 722 ~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.+.+.+.+|+++|+.|+.+|.-....-...-+++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999888888888888864
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.068 Score=52.75 Aligned_cols=51 Identities=22% Similarity=0.175 Sum_probs=41.8
Q ss_pred eEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCC-CHHHHHHHHHHcCcc
Q 002339 708 ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGD-KMETAINIGFACSLL 758 (934)
Q Consensus 708 ~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD-~~~ta~~ia~~~gi~ 758 (934)
......+-+-++.|++.+.++.|+++|+++.++|+- ....+..+...+|+.
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 344555555678999999999999999999999976 788888887777764
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.08 Score=52.91 Aligned_cols=40 Identities=23% Similarity=0.210 Sum_probs=33.1
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.|++.++++.|++.|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 578999999999999999999999988776 4444446764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.048 Score=54.69 Aligned_cols=39 Identities=21% Similarity=0.279 Sum_probs=31.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.|++.++|+.|+++|+++.++|+... +..+.+.+|+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 6789999999999999999999997532 34455666653
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.089 Score=54.70 Aligned_cols=40 Identities=15% Similarity=0.044 Sum_probs=33.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.|++.++|+.|+ +|+++.++|+.....+...-..+|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 36799999999999 68999999998877777766677764
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.071 Score=55.34 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=36.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.+++.+.|+.|++. ++++++|+-....+..+.+.+|+..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~ 137 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFP 137 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHh
Confidence 5789999999999999 9999999988888888888888753
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.052 Score=54.47 Aligned_cols=40 Identities=15% Similarity=0.229 Sum_probs=33.5
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
-++.||+.++|+.|++.|+++.++|+. ..+..+.+.+|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 468899999999999999999999987 5566666677764
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.089 Score=50.64 Aligned_cols=110 Identities=14% Similarity=0.197 Sum_probs=70.1
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
+++|+-++.++.+++.+++++++||-...-..++-...+ ..+ .+.+++-..
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~iv--gke-~i~~idi~s-------------------------- 123 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIV--GKE-RIYCIDIVS-------------------------- 123 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhc--ccc-ceeeeEEee--------------------------
Confidence 578999999999999999999999887766666555443 110 111110000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE--cChhhHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR--VSPKQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r--~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
.+..+-.+|.- .++.-. .--.+|..+|+.+++ +.+.+.++|||.-|++
T Consensus 124 --------n~~~ih~dg~h---------------------~i~~~~ds~fG~dK~~vI~~l~e-~~e~~fy~GDsvsDls 173 (220)
T COG4359 124 --------NNDYIHIDGQH---------------------SIKYTDDSQFGHDKSSVIHELSE-PNESIFYCGDSVSDLS 173 (220)
T ss_pred --------cCceEcCCCce---------------------eeecCCccccCCCcchhHHHhhc-CCceEEEecCCccccc
Confidence 00011111110 001111 112479999999998 8888999999999999
Q ss_pred HHHHcCccEEE
Q 002339 876 MIQEADIGIGI 886 (934)
Q Consensus 876 ml~~A~vGIam 886 (934)
+-+.+|+=.|-
T Consensus 174 aaklsDllFAK 184 (220)
T COG4359 174 AAKLSDLLFAK 184 (220)
T ss_pred HhhhhhhHhhH
Confidence 98888876653
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.21 Score=49.72 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=33.6
Q ss_pred CCEEEEEcCChhhHHHHHHcCccE--EE-cccchhhH-HHhCcEeecCccch
Q 002339 861 GKTTLAIGDGANDVGMIQEADIGI--GI-SGVEGMQA-VMASDFSIAQFRFL 908 (934)
Q Consensus 861 ~~~v~aiGDG~ND~~ml~~A~vGI--am-~~~e~~~a-~~~AD~ii~~~~~l 908 (934)
...++||||...|+.+=+.|++.. ++ .|...... ...||+++.++..|
T Consensus 123 ~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 123 MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 467899999999999999999953 44 34321112 23489999776554
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.60 E-value=1.3 Score=48.69 Aligned_cols=72 Identities=18% Similarity=0.187 Sum_probs=46.9
Q ss_pred CceEEEEcC-hhhHHHHHHHHhhcCC------CEEEEEcCChhhHHHHHHc-----CccEEEcccchhhHHHhCcEeecC
Q 002339 837 ASVICCRVS-PKQKALVTRLVKEGTG------KTTLAIGDGANDVGMIQEA-----DIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 837 ~~~i~~r~~-p~qK~~iv~~lk~~~~------~~v~aiGDG~ND~~ml~~A-----~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
+.++-.|-. .-+|+..++.+.+..+ ..++++||-..|-.|++.. ++||-++.... .-.|+|.|.+
T Consensus 257 kkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k---~T~A~y~L~d 333 (354)
T PLN02151 257 RKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK---ETNASYSLQE 333 (354)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC---CCcceEeCCC
Confidence 334444432 3489999998876432 2489999999999999864 45555542111 1278999988
Q ss_pred ccchhhh
Q 002339 905 FRFLERL 911 (934)
Q Consensus 905 ~~~l~~l 911 (934)
-..+..+
T Consensus 334 p~eV~~~ 340 (354)
T PLN02151 334 PDEVMEF 340 (354)
T ss_pred HHHHHHH
Confidence 6655544
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.2 Score=53.10 Aligned_cols=43 Identities=12% Similarity=0.115 Sum_probs=32.8
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHH---HHHHHcCcc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI---NIGFACSLL 758 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~---~ia~~~gi~ 758 (934)
..++-|++.+.|+.|++.|+++.++|++...... ..-+..|+-
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 4456799999999999999999999999854333 334445653
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.049 Score=52.54 Aligned_cols=42 Identities=14% Similarity=-0.016 Sum_probs=36.8
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.-+++|++.+.++.|+ .++++.++|+-....+..+...+++.
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 3467999999999998 57999999999999999988887763
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.19 Score=48.60 Aligned_cols=40 Identities=15% Similarity=0.320 Sum_probs=33.2
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (934)
+....+++.+.++.|++.|+++.++|+.....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3345589999999999999999999999988877766554
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.17 Score=50.12 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=33.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCC-HHHHHHHHHHcCc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK-METAINIGFACSL 757 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~-~~ta~~ia~~~gi 757 (934)
.+-+++.++|+.|++.|++++++|+.. ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 577999999999999999999999987 4556666666665
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.15 Score=49.13 Aligned_cols=27 Identities=26% Similarity=0.401 Sum_probs=24.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCC
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~ 744 (934)
++.|++.++|+.|++.|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 468999999999999999999999865
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.21 Score=51.02 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=31.3
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (934)
++-|++.++|+.|+++|+++.++|+-... +......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 57799999999999999999999986543 3555556665
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.86 Score=52.34 Aligned_cols=57 Identities=11% Similarity=0.073 Sum_probs=52.4
Q ss_pred hhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 703 MEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 703 iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
.-.+-.|.|++...-+.+.+....|+.|-++.|+.+..+-.+....+-+|.++||-.
T Consensus 811 a~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEa 867 (1354)
T KOG4383|consen 811 AFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEA 867 (1354)
T ss_pred HhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhcccc
Confidence 335778999999999999999999999999999999999999999999999999854
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.37 Score=49.56 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=27.8
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHH
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~t 747 (934)
-+.-+++.+.++.|++.|++|+++|||....
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 3667999999999999999999999999754
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.3 Score=51.23 Aligned_cols=69 Identities=20% Similarity=0.227 Sum_probs=34.2
Q ss_pred cCceEEEEcChhhHHHHHHHHhhcCC------CEEEEEcCChhhHHHHHHcC------ccEEEcccchhhHHHhCcEeec
Q 002339 836 CASVICCRVSPKQKALVTRLVKEGTG------KTTLAIGDGANDVGMIQEAD------IGIGISGVEGMQAVMASDFSIA 903 (934)
Q Consensus 836 ~~~~i~~r~~p~qK~~iv~~lk~~~~------~~v~aiGDG~ND~~ml~~A~------vGIam~~~e~~~a~~~AD~ii~ 903 (934)
.+.++-.|..-..|+..++.+.+..+ ..++++||...|-.|++..+ +||-++..+.-...-+|+|-+.
T Consensus 153 g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 153 GKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp -SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred CCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 34556666665679999998876443 36999999999999999854 3444443331113346666654
Q ss_pred C
Q 002339 904 Q 904 (934)
Q Consensus 904 ~ 904 (934)
+
T Consensus 233 ~ 233 (235)
T PF02358_consen 233 D 233 (235)
T ss_dssp -
T ss_pred c
Confidence 4
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.22 Score=46.67 Aligned_cols=39 Identities=10% Similarity=0.064 Sum_probs=32.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCC-CHHHHHHHHHHcC
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGD-KMETAINIGFACS 756 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD-~~~ta~~ia~~~g 756 (934)
++.+++.++|+.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 6766666655544
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.36 Score=52.94 Aligned_cols=47 Identities=30% Similarity=0.437 Sum_probs=39.3
Q ss_pred EeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH---HHcCc
Q 002339 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG---FACSL 757 (934)
Q Consensus 711 G~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia---~~~gi 757 (934)
|++.-.+.+-+++.++|+.|++.|++++++|++...+...++ +.+|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 666666777899999999999999999999999977777766 44565
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.81 E-value=0.31 Score=47.69 Aligned_cols=26 Identities=35% Similarity=0.542 Sum_probs=23.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCC
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGD 743 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD 743 (934)
++-+++.++|+.|+++|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 45689999999999999999999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.48 Score=52.40 Aligned_cols=27 Identities=30% Similarity=0.412 Sum_probs=24.5
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCC
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGD 743 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD 743 (934)
-++.|++.++|+.|+++|+++.|+|+-
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 367899999999999999999999983
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.95 Score=43.36 Aligned_cols=51 Identities=18% Similarity=0.195 Sum_probs=40.9
Q ss_pred CceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 706 dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
|-|++..- ....-|++++=+.+++.+|+++.++|.-+..-+..++..+|+.
T Consensus 36 DNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 36 DNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred cCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 44555533 3346688889999999999999999998888898899888873
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.46 Score=52.36 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=33.1
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 754 (934)
++-+++.++|+.|+++|+++.++|.-....|..+...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3568999999999999999999999999988887766
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.18 E-value=0.91 Score=58.19 Aligned_cols=41 Identities=20% Similarity=0.032 Sum_probs=36.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.+-||+.+.|+.|+++|++++++|+-....+..+-+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 36799999999999999999999999988888888888874
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=92.11 E-value=1.1 Score=46.34 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=32.9
Q ss_pred ecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH
Q 002339 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (934)
Q Consensus 715 i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 754 (934)
++-++.+++.++|++|+++|+++.++|..+......+...
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 3457899999999999999999999999877765555443
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=91.73 E-value=1 Score=43.30 Aligned_cols=107 Identities=18% Similarity=0.118 Sum_probs=69.1
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCc------ccCCceEEEEcCCCchhHHHHHHHHHHHhHHH
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL------LRQGMKQICITALNSDSVGKAAKEAVKDNILM 789 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 789 (934)
+|..++++.+....+++.|++++-+|+|..-.|...-.-+.= --+.++++
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~------------------------ 80 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVL------------------------ 80 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEE------------------------
Confidence 479999999999999999999999999997655543322211 11111211
Q ss_pred HHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc----CCCEEE
Q 002339 790 QITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG----TGKTTL 865 (934)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~----~~~~v~ 865 (934)
.+-..+-..+. . -+..+-..+.|...++.++.. .....+
T Consensus 81 ----------------------~sP~~l~~al~--------r-------Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~a 123 (157)
T PF08235_consen 81 ----------------------LSPDSLFSALH--------R-------EVISKDPEEFKIACLRDLRALFPPDGNPFYA 123 (157)
T ss_pred ----------------------ECCcchhhhhh--------c-------cccccChHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 11111111110 0 033444446788888888764 456789
Q ss_pred EEcCChhhHHHHHHcCcc
Q 002339 866 AIGDGANDVGMIQEADIG 883 (934)
Q Consensus 866 aiGDG~ND~~ml~~A~vG 883 (934)
++|...+|+.+-++++|-
T Consensus 124 gfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 124 GFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ecCCcHHHHHHHHHcCCC
Confidence 999999999999988875
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.58 E-value=0.22 Score=51.67 Aligned_cols=39 Identities=8% Similarity=0.077 Sum_probs=31.1
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
-++.++++++|+.| ++++.++|+.....+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 34568999999998 5999999998877777766666664
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=91.38 E-value=0.43 Score=49.03 Aligned_cols=28 Identities=25% Similarity=0.301 Sum_probs=25.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~ 745 (934)
++.|++.++++.|+++|++++++|+...
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~ 121 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFP 121 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5679999999999999999999998654
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=91.09 E-value=0.86 Score=47.24 Aligned_cols=42 Identities=14% Similarity=0.148 Sum_probs=36.6
Q ss_pred cCCCchHHHHHHH--HhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKL--AQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l--~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
|+.|+.+++++.+ ++.|+.+.|+|.-+......+-+.-|+..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 5679999999999 55899999999999988888888888754
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=90.49 E-value=1.2 Score=43.79 Aligned_cols=27 Identities=26% Similarity=0.431 Sum_probs=23.6
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCH
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~ 745 (934)
+-|++.++|+.|+++|+++.++|....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999997543
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=90.11 E-value=0.32 Score=55.67 Aligned_cols=48 Identities=23% Similarity=0.418 Sum_probs=40.8
Q ss_pred EEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhH--HHHHHcCccEEEcc
Q 002339 840 ICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDV--GMIQEADIGIGISG 888 (934)
Q Consensus 840 i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~--~ml~~A~vGIam~~ 888 (934)
.|..++|+.--++|+.+|+ .|++|+..|..+|-. -.+-.||++|++..
T Consensus 971 LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~ 1020 (1354)
T KOG4383|consen 971 LFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDD 1020 (1354)
T ss_pred eccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEecc
Confidence 6788999999999999998 899999999998843 34567999998754
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.70 E-value=4.4 Score=42.84 Aligned_cols=207 Identities=12% Similarity=0.052 Sum_probs=100.9
Q ss_pred CceEEEeee--ecccCCCchHHHHHHHHhc-CCeEEEEcCCCHHHHHHHHHHcC--cccCCceEE-EEcCCCchhHHHHH
Q 002339 706 DLILVGATA--VEDKLQKGVPQCIDKLAQA-GLKIWVLTGDKMETAINIGFACS--LLRQGMKQI-CITALNSDSVGKAA 779 (934)
Q Consensus 706 dl~~lG~i~--i~D~lr~~~~~~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~g--i~~~~~~~i-~~~~~~~~~~~~~~ 779 (934)
|.++..+.- ....+-++..+.++.|... ..-+||+|||+.........-.| ++..++--+ ..++..........
T Consensus 26 DGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~ 105 (266)
T COG1877 26 DGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEA 105 (266)
T ss_pred cccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHH
Confidence 344444443 3345667888999999877 45899999999998887765333 333333322 33333222111111
Q ss_pred HHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcCh----hhhH--hhhHH--HHHHHHhhhhccCceEEEEcChhhHHH
Q 002339 780 KEAVKDNILMQITNASQMIKLERDPHAAYALIIEGK----TLAY--ALEDD--MKHHFLGLAVECASVICCRVSPKQKAL 851 (934)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~----~l~~--~~~~~--~~~~~~~~~~~~~~~i~~r~~p~qK~~ 851 (934)
.......+...+...........-.....++.+.=. .... .+... ......--....+.+|.+|-+-..|+.
T Consensus 106 ~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~ 185 (266)
T COG1877 106 DLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGA 185 (266)
T ss_pred HhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHH
Confidence 111112222222222221111110111112111110 0000 00000 000000011233567888887778999
Q ss_pred HHHHHhhcCC---CEEEEEcCChhhHHHHHHcCc--cEEEc-ccchhhHHHhCcEeecCccchhhhH
Q 002339 852 VTRLVKEGTG---KTTLAIGDGANDVGMIQEADI--GIGIS-GVEGMQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 852 iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~v--GIam~-~~e~~~a~~~AD~ii~~~~~l~~ll 912 (934)
.++.+....+ ..++..||...|-.|++..+- |+.+. +....+|+-.++.+-.....+..++
T Consensus 186 a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~t~a~~~~~~~~~~~~~l~~~~ 252 (266)
T COG1877 186 AIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGSTQAKFRLAGVYGFLRSLYKLL 252 (266)
T ss_pred HHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCCcccccccccccHHHHHHHHHHH
Confidence 9997766443 358899999999999999983 33221 1112225555444444444455553
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.62 E-value=0.96 Score=45.95 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=26.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~t 747 (934)
++.|++.++|+.|+++|+++.++|.-+...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 468999999999999999999999976554
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=89.38 E-value=0.84 Score=48.06 Aligned_cols=48 Identities=10% Similarity=0.127 Sum_probs=37.5
Q ss_pred EeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHH--HHHHHcCcc
Q 002339 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI--NIGFACSLL 758 (934)
Q Consensus 711 G~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~--~ia~~~gi~ 758 (934)
|.+.-...+-|+++++|+.|+++|+++.++|.-....+. ....++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555566778899999999999999999999996554433 455667764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=88.16 E-value=2.4 Score=42.85 Aligned_cols=38 Identities=21% Similarity=0.254 Sum_probs=26.2
Q ss_pred HHHHHHHHhhcCC-CEEEEEcCChhhHHHHHHc--CccE-EE
Q 002339 849 KALVTRLVKEGTG-KTTLAIGDGANDVGMIQEA--DIGI-GI 886 (934)
Q Consensus 849 K~~iv~~lk~~~~-~~v~aiGDG~ND~~ml~~A--~vGI-am 886 (934)
|..++..+.+..+ ..+++|||..+|+.+-++| |+-. ++
T Consensus 132 kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 132 KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence 3344443332233 4688999999999999999 9865 44
|
2 hypothetical protein; Provisional |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.66 E-value=4 Score=40.39 Aligned_cols=47 Identities=19% Similarity=0.372 Sum_probs=33.9
Q ss_pred CceEEEEcChhh--------HHHHHHHHhhcC--CCEEEEEcCChhhHHHHHHcCcc
Q 002339 837 ASVICCRVSPKQ--------KALVTRLVKEGT--GKTTLAIGDGANDVGMIQEADIG 883 (934)
Q Consensus 837 ~~~i~~r~~p~q--------K~~iv~~lk~~~--~~~v~aiGDG~ND~~ml~~A~vG 883 (934)
..+.+|.-.|++ .+.+.++++++. -....+|||-..|+.+-..|+++
T Consensus 88 d~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 88 DGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 344666666653 356667777631 26789999999999999999887
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=86.58 E-value=0.69 Score=41.22 Aligned_cols=48 Identities=15% Similarity=0.174 Sum_probs=36.3
Q ss_pred EeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH---HHcCcc
Q 002339 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG---FACSLL 758 (934)
Q Consensus 711 G~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia---~~~gi~ 758 (934)
|++...+++=|++.++|+.|+++|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 666677888899999999999999999999988766655554 445654
|
... |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=85.57 E-value=3.1 Score=48.43 Aligned_cols=68 Identities=12% Similarity=0.137 Sum_probs=45.2
Q ss_pred ChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccchhhhHhhhchhhhH
Q 002339 845 SPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYK 921 (934)
Q Consensus 845 ~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~l~~lll~~Gr~~~~ 921 (934)
.-++|..-++.... ......+.||..+|.+||+.|+-+..++.+.. -.+...++...+++..||..++
T Consensus 173 ~Ge~Kv~rl~~~~g-~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~--------~~~~~~~~~~~~~fhdgrl~~~ 240 (497)
T PLN02177 173 VGDHKRDAVLKEFG-DALPDLGLGDRETDHDFMSICKEGYMVPRTKC--------EPLPRNKLLSPVIFHEGRLVQR 240 (497)
T ss_pred ccHHHHHHHHHHhC-CCCceEEEECCccHHHHHHhCCccEEeCCCCC--------CcCCcccCCCceeeeCCcccCC
Confidence 34567766653321 11223799999999999999999999864221 1155567777777777876554
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.43 E-value=4.3 Score=40.79 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=34.3
Q ss_pred cCCCchHHHHHHHHhcCC-eEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGL-KIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGI-kv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
|+-|+..++|+.+++.|. .++|+|--+.-....+-+..|+-
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~ 125 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH 125 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH
Confidence 466999999999999997 99999988887777777777663
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=85.37 E-value=1.4 Score=45.76 Aligned_cols=30 Identities=17% Similarity=0.277 Sum_probs=26.7
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHH
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ 746 (934)
++.-|++.+.++.+++.|++|+.+|||+..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 355588999999999999999999999865
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=84.13 E-value=2.1 Score=45.30 Aligned_cols=56 Identities=7% Similarity=0.026 Sum_probs=43.9
Q ss_pred EeeeecccCCCchHHHHHHHHhcCCeEEEEcC---CCHHHHHHHHHHcCcccCCceEEE
Q 002339 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTG---DKMETAINIGFACSLLRQGMKQIC 766 (934)
Q Consensus 711 G~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTG---D~~~ta~~ia~~~gi~~~~~~~i~ 766 (934)
|++.-.+.+-+++.++|++|+++|++++++|| +.........+++|+.....+++.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit 68 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFT 68 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEee
Confidence 44445566678999999999999999999996 888888888888898654444443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=83.22 E-value=1.8 Score=46.02 Aligned_cols=48 Identities=17% Similarity=0.218 Sum_probs=37.2
Q ss_pred Eeeeeccc----CCCchHHHHHHHHhcCCeEEEEcCCCHHH---HHHHHHHcCcc
Q 002339 711 GATAVEDK----LQKGVPQCIDKLAQAGLKIWVLTGDKMET---AINIGFACSLL 758 (934)
Q Consensus 711 G~i~i~D~----lr~~~~~~I~~l~~aGIkv~mlTGD~~~t---a~~ia~~~gi~ 758 (934)
|++.-.+. +-|++.++|++|+++|++++++||++..+ ......++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444555 77899999999999999999999988775 44455566764
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=82.44 E-value=4.5 Score=40.36 Aligned_cols=38 Identities=11% Similarity=-0.018 Sum_probs=31.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.+++.++|+.|+ .+++++|+-....+..+...+|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 36789999999997 489999998888888888888874
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=81.63 E-value=3.1 Score=44.24 Aligned_cols=41 Identities=10% Similarity=0.126 Sum_probs=37.9
Q ss_pred CC-CchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 719 LQ-KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 719 lr-~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
+| |++.+++++|+++|+++.++|+.....+...-..+||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 55 999999999999999999999999999999999999975
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.43 E-value=1.7 Score=45.77 Aligned_cols=45 Identities=16% Similarity=0.271 Sum_probs=40.1
Q ss_pred EeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 002339 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (934)
Q Consensus 711 G~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (934)
|++.-.+.+-|++.++|+.|+++|++++++||+...+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999998888887775
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.15 E-value=4.2 Score=40.62 Aligned_cols=36 Identities=17% Similarity=0.049 Sum_probs=30.2
Q ss_pred hHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 723 VPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 723 ~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
..++|..|++. +++.++||.....+..+-...|+..
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~ 127 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRR 127 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHh
Confidence 36899999865 8999999999898888888888753
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=81.01 E-value=51 Score=41.17 Aligned_cols=44 Identities=11% Similarity=-0.003 Sum_probs=32.7
Q ss_pred CCCchHHHHHHHHhc-CCeEEEEcCCCHHHHHHHHHHc--CcccCCc
Q 002339 719 LQKGVPQCIDKLAQA-GLKIWVLTGDKMETAINIGFAC--SLLRQGM 762 (934)
Q Consensus 719 lr~~~~~~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~--gi~~~~~ 762 (934)
+-+++.++|+.|.+. +..|+|+|||...+.......+ ++...++
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~aeHG 579 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENG 579 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEEEeCC
Confidence 456788889999865 7899999999999888776543 3444433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 934 | ||||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 3e-10 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 7e-09 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 1e-08 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 3e-05 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 6e-05 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 6e-05 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 4e-04 |
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 934 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 3e-31 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 2e-26 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 6e-05 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 3e-25 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 7e-05 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 5e-21 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 7e-07 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 2e-20 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 2e-05 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 8e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-05 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 6e-08 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 1e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 3e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 5e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 5e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 7e-05 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 7e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 3e-31
Identities = 100/493 (20%), Positives = 153/493 (31%), Gaps = 132/493 (26%)
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRES 469
E LG I SDKTGTLT NQM SV +M I +
Sbjct: 341 ETLGCTSVICSDKTGTLTTNQM-----SV-----------------CKMFIIDKVDGDFC 378
Query: 470 ANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRI 529
+ + +GS + E L + ++ D L+ I
Sbjct: 379 SLNEFSITGS---------------------TYAPEGEVLKNDKPIRSGQFDGLVELATI 417
Query: 530 LAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589
A+C+ + + NE G E E A + + ++ ER
Sbjct: 418 CALCNDSSLDFNETKGVYEKVGE-ATETALTTLVEKMNV--FNTEVRNLSKVERANACNS 474
Query: 590 PVEREFKILNLLDFTSKRKRMSVIVRDEDGQI-----LLLCKGADSIIFDR---LSKNGR 641
+ + K L+F+ RK MSV + KGA + DR +
Sbjct: 475 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTT 534
Query: 642 MYE------EATTKLLNEYGEA--GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADRE 693
E ++ E+G LR LALA + +
Sbjct: 535 RVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKR----------------EEMV 578
Query: 694 ATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF 753
E DL VG + D +K V I AG+++ ++TGD TAI I
Sbjct: 579 LDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC- 637
Query: 754 ACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIE 813
++I I N + +A
Sbjct: 638 ---------RRIGIFGENEEVADRA---------------------------------YT 655
Query: 814 GKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVK--EGTGKTTLAIGDGA 871
G+ DD+ A A RV P K +++V+ + + T GDG
Sbjct: 656 GREF-----DDLPLAEQREACRRACCF-ARVEPSHK---SKIVEYLQSYDEITAMTGDGV 706
Query: 872 NDVGMIQEADIGI 884
ND +++A+IGI
Sbjct: 707 NDAPALKKAEIGI 719
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 2e-26
Identities = 83/393 (21%), Positives = 133/393 (33%), Gaps = 87/393 (22%)
Query: 517 EPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAES----PDEAAFLVAAREFGFEFYR 572
+ + +T R+L +C+ A + E A L +
Sbjct: 422 DQSSETWRALCRVLTLCNRA--AFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG 479
Query: 573 RTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDED---GQILLLCKGAD 629
RER+P + +I F S K I ED + +L+ KGA
Sbjct: 480 -------YRERFP-------KVCEI----PFNSTNKFQLSIHTLEDPRDPRHVLVMKGAP 521
Query: 630 SIIFDRLSK---NGR---MYEEATTKLL---NEYGEAGLRTLALAYKQLDESEYSAWNSE 680
+ +R S G+ + E+ G G R L L E +Y +
Sbjct: 522 ERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAF 581
Query: 681 FQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740
D EA + L G ++ D + VP + K AG+++ ++
Sbjct: 582 ----------DVEAM-----NFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMV 626
Query: 741 TGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKL 800
TGD TA I + I + S++V A ++
Sbjct: 627 TGDHPITAKAIA----------ASVGIISEGSETVEDIAAR-------------LRVPVD 663
Query: 801 ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVIC-CRVSPKQKALVTRLVKE- 858
+ + A A +I G L DM L A+ + R SP+QK +V+
Sbjct: 664 QVNRKDARACVINGMQL-----KDMDPSELVEALRTHPEMVFARTSPQQK---LVIVESC 715
Query: 859 -GTGKTTLAIGDGANDVGMIQEADIGI--GISG 888
G GDG ND +++ADIG+ GI+G
Sbjct: 716 QRLGAIVAVTGDGVNDSPALKKADIGVAMGIAG 748
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 6e-05
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSE 449
E LG I SDKTGTLT N+M + +E
Sbjct: 375 ETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTE 414
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 3e-25
Identities = 90/393 (22%), Positives = 137/393 (34%), Gaps = 87/393 (22%)
Query: 517 EPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAES----PDEAAFLVAAREFGFEFYR 572
+ T RI A+C+ A N+ S E+A L
Sbjct: 417 DKTSATWSALSRIAALCNRA--VFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQG 474
Query: 573 RTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGAD 629
+R+R P + +I F S K I +E + + LL+ KGA
Sbjct: 475 -------MRDRNP-------KIVEI----PFNSTNKYQLSIHENEKSSESRYLLVMKGAP 516
Query: 630 SIIFDRLSK---NGR---MYEEATTKLL---NEYGEAGLRTLALAYKQLDESEYSAWNSE 680
I DR S NG + E+ E G G R L + L E +Y
Sbjct: 517 ERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKY------ 570
Query: 681 FQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740
D + + DL VG A+ D + VP + K AG+K+ ++
Sbjct: 571 ----NEGYPFDAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMV 621
Query: 741 TGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKL 800
TGD TA I K + I + ++++ A +
Sbjct: 622 TGDHPITAKAIA----------KGVGIISEGNETIEDIAAR-------------LNIPIG 658
Query: 801 ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVIC-CRVSPKQKALVTRLVKE- 858
+ +P A A ++ G L D+ L + + I R SP+QK +V+
Sbjct: 659 QVNPRDAKACVVHGSDL-----KDLSTEVLDDILHYHTEIVFARTSPQQK---LIIVEGC 710
Query: 859 -GTGKTTLAIGDGANDVGMIQEADIGI--GISG 888
G GDG ND +++ADIG+ GISG
Sbjct: 711 QRQGAIVAVTGDGVNDSPALKKADIGVAMGISG 743
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 7e-05
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSE 449
E LG TI SDKTGTLT N+M + +E
Sbjct: 370 ETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE 409
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 5e-21
Identities = 51/348 (14%), Positives = 106/348 (30%), Gaps = 107/348 (30%)
Query: 541 NEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNL 600
E + +AA + + + ++
Sbjct: 367 RVENQDAI-------DAAMVGMLADPKE----------------------ARAGIREVHF 397
Query: 601 LDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLR 660
L F KR ++ D G + KGA I + L+K + ++++Y E GLR
Sbjct: 398 LPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILE-LAKASNDLSKKVLSIIDKYAERGLR 456
Query: 661 TLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQ 720
+LA+A + + E + VG + D +
Sbjct: 457 SLAVARQVVPEKT--------------------------KESPGAPWEFVGLLPLFDPPR 490
Query: 721 KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAK 780
+ I + G+ + ++TGD++ G +++
Sbjct: 491 HDSAETIRRALNLGVNVKMITGDQLAIGKETG----------RRL--------------- 525
Query: 781 EAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVI 840
+ + +S ++ +D ++ + +E A
Sbjct: 526 -----GMGTNMYPSSALLGTHKD-------------------ANLASIPVEELIEKADGF 561
Query: 841 CCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG 888
V P+ K + + ++E GDG ND +++ADIGI ++
Sbjct: 562 -AGVFPEHKYEIVKKLQE-RKHIVGMTGDGVNDAPALKKADIGIAVAD 607
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 7e-07
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQN 466
EE+ +D + SDKTGTLT N++ K V GV +V L AA MA +E Q+
Sbjct: 318 EEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA--MASRVENQD 372
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 2e-20
Identities = 55/309 (17%), Positives = 99/309 (32%), Gaps = 89/309 (28%)
Query: 583 RYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRM 642
+Y P+ + V ++K+L F K++ +V G+ + KGA + + ++ +
Sbjct: 431 KYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPI 490
Query: 643 YEEATTKLLN---EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHV 699
EE N E+ G R+L +A K+
Sbjct: 491 PEEVDQAYKNKVAEFATRGFRSLGVARKR------------------------------- 519
Query: 700 SDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759
E ++G D + + + + GL I +LTGD + A
Sbjct: 520 ---GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIA----------- 565
Query: 760 QGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819
++ + + L + I + L
Sbjct: 566 ---RETS-----------------------------RQLGLGTN-------IYNAERLGL 586
Query: 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQE 879
DM + VE A V P+ K V ++++ G GDG ND +++
Sbjct: 587 GGGGDMPGSEVYDFVEAADGFA-EVFPQHKYNVVEILQQR-GYLVAMTGDGVNDAPSLKK 644
Query: 880 ADIGIGISG 888
AD GI + G
Sbjct: 645 ADTGIAVEG 653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 2e-05
Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 24/109 (22%)
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRES 469
E L V+ + SDKTGTLT N++ GV P ++ L A
Sbjct: 367 ESLAGVEILCSDKTGTLTKNKLSLHDPYTVA---GVDPEDLMLTAC-------------L 410
Query: 470 ANAKHKNSGSEIELETVITSNDGNDFKRRIKG--------FNFEDSRLM 510
A ++ K I+ + + K + F+ +++
Sbjct: 411 AASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVV 459
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 8e-16
Identities = 38/179 (21%), Positives = 55/179 (30%), Gaps = 65/179 (36%)
Query: 545 GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLD-- 602
NL + A L E + R+ +D
Sbjct: 33 KNLL-------DTAVLEGTDEESARS---------LASRWQ--------------KIDEI 62
Query: 603 -FTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSK---NGR---MYEEATTKLL---N 652
F +R+RMSV+V + L+CKGA I + S+ NG + + K+ +
Sbjct: 63 PFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTD 122
Query: 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVG 711
GLR +A+A K L E E DLIL G
Sbjct: 123 TLNRQGLRVVAVATKYLPARE-----------------------GDYQRADESDLILEG 158
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.4 bits (148), Expect = 1e-09
Identities = 84/490 (17%), Positives = 158/490 (32%), Gaps = 124/490 (25%)
Query: 2 TRGRIRAKLRRSQLYTFACLRPHVNET-EGSVQGC------PRVIYCNQPHMHKKRPLK- 53
+R + KLR++ L LRP N +G V G V C + K K
Sbjct: 132 SRLQPYLKLRQA-LLE---LRPAKNVLIDG-VLGSGKTWVALDV--CLSYKVQCKMDFKI 184
Query: 54 YCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVV 113
+ +++ N P+ + E + + I + + L I
Sbjct: 185 F---WLNLKNCNS----PETVLEMLQ---KLLYQIDPNWTSRSDHSSNI-----KLRI-- 227
Query: 114 GVSMAKEALEDW-RRFMQDKEVNARKVSVHVGNGVFSYKPWE------KI-------QVG 159
+++ RR ++ K + + V V + K W KI QV
Sbjct: 228 ------HSIQAELRRLLKSKP---YENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT 278
Query: 160 DIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGE-TNLKVK---RAMEATSPLNED- 214
D + L S + E +L + + + + R + T+P
Sbjct: 279 DFLSAATTTHIS--LDHHSMTLTPD----EVKSLLLKYLDCRPQDLPREVLTTNPRRLSI 332
Query: 215 --EAFKEFTGT------VKCENPNPSLYTFVGNIEYD--RELY---AIDPSQILLRDSKL 261
E+ ++ T V C+ + + + +E R+++ ++ P + +
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP-----SAHI 387
Query: 262 RNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFA 321
+ S+I+ + K S +EK+ + + +I + + + +A
Sbjct: 388 --PTILL-SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA 444
Query: 322 V--KI--NYQTPQ---WWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGY-LIPISLYV 373
+ I +Y P+ L P D YF +H+ G+ L I
Sbjct: 445 LHRSIVDHYNIPKTFDSDDLIPPYLDQYF---------YSHI-------GHHLKNIEHPE 488
Query: 374 SIEIVK--FLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDT---ILSDKTGT--- 425
+ + + FL F+ Q I A S LN L Q+ + D
Sbjct: 489 RMTLFRMVFLDFRFLEQKIR----HDSTAWNASGSILN-TLQQLKFYKPYICDNDPKYER 543
Query: 426 LTCNQMDFLK 435
L +DFL
Sbjct: 544 LVNAILDFLP 553
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.9 bits (131), Expect = 1e-07
Identities = 97/717 (13%), Positives = 216/717 (30%), Gaps = 225/717 (31%)
Query: 24 HVNETEGSVQ-GCPRVIYCNQPHMHKKRPLKYCTNY----ISTTKYNFFSYFPKALFEQF 78
H++ G Q ++ + K + +S + +
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI-------DHIIMSK 58
Query: 79 NRVANIYFLIAALLS---------------------VTPLS------------------- 98
+ V+ L LLS ++P+
Sbjct: 59 DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118
Query: 99 ------PFSP--VSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVH--VGNGVF 148
F+ VS L P ++AL + R A+ V + +G+G
Sbjct: 119 LYNDNQVFAKYNVSRLQP------YLKLRQALLELRP--------AKNVLIDGVLGSG-- 162
Query: 149 SYKPWEKIQVGDIVKVEKDQFFPADLLFLS----SSYEDGICYVETMNLDGETNLKVKRA 204
K W + V KV+ + +L+ +S E + ++ + + N +
Sbjct: 163 --KTWVALDVCLSYKVQ--CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 205 MEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPS-QILL--RDSKL 261
+ L E +K P + + N++ + A + S +ILL R ++
Sbjct: 219 HSSNIKLRIHSIQAELRRLLK-SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV 277
Query: 262 RNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGI-EKKMDKIIFILFAILVLIS--LISSI 318
+ + S T H S + T +P + + K +D L ++ + +S I
Sbjct: 278 TD----FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII 333
Query: 319 GFAVKINYQTPQWW--YLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIE 376
+++ T W K T + I S+
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTI---------------------------IE--SSLN 364
Query: 377 IVKF--LQAIFINQDISMYDDESGIPAQART---SNLNEELGQVDTILSDKTGTLTCNQM 431
+++ + +F +S++ + IP + ++ + V +++ ++
Sbjct: 365 VLEPAEYRKMF--DRLSVFPPSAHIPTILLSLIWFDVIKS--DVMVVVNK------LHKY 414
Query: 432 DFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSND 491
++ + + PS + ++L+ + A H+ +++
Sbjct: 415 SLVEKQPKESTISI-PS---------IYLELKVKLENEY-ALHR---------SIV---- 450
Query: 492 GNDFKRRIKGFNFEDSRL--MDGNW-------LKEPNVDTLLLFFRIL---------AIC 533
D K F+ +D +D + LK + FR++ I
Sbjct: 451 --DHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIR 508
Query: 534 HTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593
H + + A +FY+ +I + P +
Sbjct: 509 HDSTA----------WNASGSILNTLQQ------LKFYKP-----YICDNDP------KY 541
Query: 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKL 650
E + +LDF K + L+ K D + ++++ ++EEA ++
Sbjct: 542 ERLVNAILDFLPKI-----------EENLICSKYTDLLRIALMAEDEAIFEEAHKQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 6e-05
Identities = 53/401 (13%), Positives = 119/401 (29%), Gaps = 108/401 (26%)
Query: 494 DFKRRIKGFNFED-------SRLMDGNWLKEPNVD--TLLLFFRILAICHTAIPELNEET 544
F + +D +D + + + TL LF+ +L+ + + EE
Sbjct: 28 AFVDNFDCKDVQDMPKSILSKEEID-HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV 86
Query: 545 GNLTYEAESPDEAAFLVAA----------REFGFEFYR-RTQSSVFIRERYPPKGQPVER 593
+ Y+ FL++ + R R + + + V R
Sbjct: 87 LRINYK--------FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN---QVFAKY--NVSR 133
Query: 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLC--KG-------ADSIIFDRLSK--NGRM 642
L L R+ ++ + +L+ G D + ++ + ++
Sbjct: 134 LQPYLKL------RQ---ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI 184
Query: 643 Y-----EEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLE 697
+ + + + L L Q+D +++ + K I + +
Sbjct: 185 FWLNLKNCNSPETV-------LEMLQKLLYQID-PNWTSRSDHSSNIKLRIHSIQAELRR 236
Query: 698 HVSDMMEKD--LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG--- 752
+ ++ L+L+ V++ + + KI + T K T
Sbjct: 237 LLKSKPYENCLLVLLN---VQN------AKAWNAFN-LSCKILLTTRFKQVTDFLSAATT 286
Query: 753 -------FACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMI-KLERDP 804
+ +L +K + + L+ +E + N +I + RD
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDC-RPQDLPREVLTTNPR-----RLSIIAESIRDG 340
Query: 805 HA-----------AYALIIEGKTLAYALEDDMKHHFLGLAV 834
A IIE +L + + F L+V
Sbjct: 341 LATWDNWKHVNCDKLTTIIE-SSLNVLEPAEYRKMFDRLSV 380
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 6e-08
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 844 VSPKQKALVTRLVKEGTG-KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMA-SDFS 901
K V +L+KE K + IGDGA D+ AD IG G Q V + +
Sbjct: 153 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWY 212
Query: 902 IAQFRFLERLL 912
I F L L
Sbjct: 213 ITDFVELLGEL 223
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 839 VICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGI 884
+ PK++++ + + +A GD ND M+ EA GI
Sbjct: 126 YQLRQKDPKRQSV---IAFKSLYYRVIAAGDSYNDTTMLSEAHAGI 168
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 864 TLAIGDGANDVGMIQEADIGIG 885
T+A+GDGAND+ M ++A + I
Sbjct: 162 TVAVGDGANDISMFKKAGLKIA 183
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 864 TLAIGDGANDVGMIQEADIGIG 885
TL +GDGAND+ M + A I I
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIA 182
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 10/47 (21%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 838 SVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGI 884
C K V + E + + IGD DV + +D+
Sbjct: 141 KGTCSNQCGCCKPSVIHELSE-PNQYIIMIGDSVTDVEAAKLSDLCF 186
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 864 TLAIGDGANDVGMIQEADIGIG 885
T+A+GDGAND+ M+ A +G+
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVA 285
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 5e-05
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 864 TLAIGDGANDVGMIQEADIGIG 885
+A GDGAND+ M++ A GI
Sbjct: 265 IIACGDGANDLPMLEHAGTGIA 286
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 7e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 864 TLAIGDGANDVGMIQEADIGIG 885
T+A+GDGAND+ M+ A +GI
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIA 363
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 7e-04
Identities = 8/51 (15%), Positives = 21/51 (41%)
Query: 849 KALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASD 899
L + + +GD ND+ + + D+ + + + + V+A+
Sbjct: 182 ARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDPPEGVLATP 232
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 934 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.86 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.89 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.85 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.84 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.78 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.71 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.48 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.15 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.13 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.1 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.09 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.02 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.99 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.91 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.9 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.88 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.87 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.86 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.85 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.82 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.82 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.81 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.81 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.79 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.77 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.76 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.75 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.7 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.67 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.67 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.67 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.66 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.61 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.6 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.57 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.55 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.54 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.54 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.51 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.49 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.49 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.45 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.43 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.42 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.41 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.36 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.36 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.35 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.35 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.33 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.29 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.29 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.25 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.25 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.23 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.21 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.16 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.15 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.14 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.13 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.13 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.12 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.12 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.05 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.05 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.03 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.01 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.0 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.99 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.98 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.98 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.98 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.97 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.96 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.96 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.95 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.9 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.89 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.87 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.86 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.84 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.82 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.82 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.8 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.79 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.79 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.79 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.79 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.77 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.76 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.75 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.71 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.7 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.68 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.61 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.61 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.57 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.55 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.55 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.54 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.53 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.47 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.47 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.39 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.39 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.34 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.34 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.29 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.22 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.19 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.1 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.02 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.97 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.92 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.86 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.84 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.79 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.71 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.67 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.64 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.63 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.55 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.44 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.31 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.2 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.17 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.06 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.0 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.98 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.96 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 95.92 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.55 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.52 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.5 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 95.05 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.96 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 94.74 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.24 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 94.13 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 93.56 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 92.53 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 92.41 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 91.37 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 89.61 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 87.52 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 87.31 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 84.97 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-93 Score=893.45 Aligned_cols=682 Identities=19% Similarity=0.222 Sum_probs=532.4
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc--CC-------CCCccccchhhHHHHHHHH
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LS-------PFSPVSMLLPLAIVVGVSM 117 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~--~~-------~~~~~~~~~~l~~v~~~~~ 117 (934)
...|+.+||+|.+..++...++ +.|++||.++++++++++++++++. +. ....+...+++++++++++
T Consensus 78 a~~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 154 (1034)
T 3ixz_A 78 AAELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTG 154 (1034)
T ss_pred HHHHHHhhCCCCCCCCCCCCHH---HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHH
Confidence 3467889999999988876554 8899999999999999999888753 11 1123445566778888999
Q ss_pred HHHHHHHHHHhhhhhhhc---cceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCC
Q 002339 118 AKEALEDWRRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (934)
Q Consensus 118 ~~~~~~~~~r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~Lt 194 (934)
+..+++++|+.++.+.++ .++++|+ |||++++|+|++|+|||||.|++||.||||++|+++++ +.||||+||
T Consensus 155 ~~~~~qe~ka~~al~~L~~l~~~~a~Vi-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LT 229 (1034)
T 3ixz_A 155 CFGYYQEFKSTNIIASFKNLVPQQATVI-RDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLT 229 (1034)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEE-ECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecccC
Confidence 999999999999876655 4789999 89999999999999999999999999999999999664 789999999
Q ss_pred CCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEe
Q 002339 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFT 274 (934)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~t 274 (934)
|||.|+.|.+.... ..|++..|++|+||.+.+ |.+.|+|++|
T Consensus 230 GES~pv~K~~~~~~-------------------------------------~~~~~~~n~~f~GT~v~~-G~~~~vVv~t 271 (1034)
T 3ixz_A 230 GESEPQTRSPECTH-------------------------------------ESPLETRNIAFFSTMCLE-GTAQGLVVNT 271 (1034)
T ss_pred CCCCCeeccCCCcc-------------------------------------ccccccccceecceeEEe-ecceEEEEee
Confidence 99999999875422 012223344444444432 3399999999
Q ss_pred ccchhh---hhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchh
Q 002339 275 GHDSKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVP 351 (934)
Q Consensus 275 G~~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (934)
|.+|.+ .++....+.+++|+++.+++++.++.+++++++++.++++.++.. .|
T Consensus 272 G~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~------------------- 327 (1034)
T 3ixz_A 272 GDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGY-----TF------------------- 327 (1034)
T ss_pred hhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----hH-------------------
Confidence 999954 455567778899999999999999998888888877766543211 12
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecce
Q 002339 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQM 431 (934)
Q Consensus 352 ~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m 431 (934)
...+++++.+++.+||++||++++++..+++.+| ++++++||+++++|+||++++||||||||||+|+|
T Consensus 328 -~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m 396 (1034)
T 3ixz_A 328 -LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRM 396 (1034)
T ss_pred -HHHHHHHHHHHHheeccccHHHHHHHHHHHHHHH----------hhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeE
Confidence 3578889999999999999999999999999999 88999999999999999999999999999999999
Q ss_pred EEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccc
Q 002339 432 DFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (934)
Q Consensus 432 ~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (934)
+|.++++++..|........ .+
T Consensus 397 ~v~~~~~~~~~~~~~~~~~~------------------------------------------------~~---------- 418 (1034)
T 3ixz_A 397 TVSHLWFDNHIHSADTTEDQ------------------------------------------------SG---------- 418 (1034)
T ss_pred EEEEEEECCccccccCcccc------------------------------------------------cc----------
Confidence 99999988766543211000 00
Q ss_pred cCCCCCCChhHHHHHHHHHhhcceeeecccCCCC--ceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCC
Q 002339 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEETG--NLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (934)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~--~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~ 589 (934)
............++.++++||++....+.+.. .-....++|.|.|+++++...+.....
T Consensus 419 --~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~----------------- 479 (1034)
T 3ixz_A 419 --QTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG----------------- 479 (1034)
T ss_pred --cccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHH-----------------
Confidence 00011234566889999999998765433211 112346899999999999887643211
Q ss_pred CceeEEEEeEecCCCCCCceEEEEEEcC---CCcEEEEEcccchhhhHhhhc---------cccccHHHHHHHHHHHHhc
Q 002339 590 PVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSK---------NGRMYEEATTKLLNEYGEA 657 (934)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~ 657 (934)
....|+.++.+||+|+||||+++++.. ++++.+|+|||||.|+++|+. .+++.++.+.+.+++++.+
T Consensus 480 -~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ 558 (1034)
T 3ixz_A 480 -YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGL 558 (1034)
T ss_pred -HHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhc
Confidence 246788899999999999999888754 368999999999999999975 1223466788899999999
Q ss_pred CCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeE
Q 002339 658 GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKI 737 (934)
Q Consensus 658 Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv 737 (934)
|+|||++|+|.++.+++.+|... ++ +..+.+|+||+|+|+++++||+|++++++|++|+++||+|
T Consensus 559 G~RvLa~A~~~l~~~~~~~~~~~----------~~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~v 623 (1034)
T 3ixz_A 559 GERVLGFCQLYLSEKDYPPGYAF----------DV-----EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRV 623 (1034)
T ss_pred CcHhheEeEEecChhhccccccc----------ch-----hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeE
Confidence 99999999999988766544321 11 1123568999999999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhh
Q 002339 738 WVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTL 817 (934)
Q Consensus 738 ~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l 817 (934)
||+|||+..||.++|++||+..++...+ . +..... ...............+++|..+
T Consensus 624 vmiTGd~~~tA~~ia~~lgi~~~~~~~i----------~---------~~~~~~----~~~~~~~~~~~~~~~~~~g~~l 680 (1034)
T 3ixz_A 624 IMVTGDHPITAKAIAASVGIISEGSETV----------E---------DIAARL----RVPVDQVNRKDARACVINGMQL 680 (1034)
T ss_pred EEEeCCCHHHHHHHHHHcCCCCCCchHH----------H---------HHHHhh----CccchhccccccceeEEecHhh
Confidence 9999999999999999999976432110 0 000000 0000001122234568889888
Q ss_pred hHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc--ccchhhHH
Q 002339 818 AYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQAV 895 (934)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~~~a~ 895 (934)
.....+++.+ ....+...+|+|++|+||..+|+.+++ .|+.|+|+|||.||++||+.||+||||+ +.+. +|
T Consensus 681 ~~~~~~~l~~----~~~~~~~~v~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~--aK 753 (1034)
T 3ixz_A 681 KDMDPSELVE----ALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDA--AK 753 (1034)
T ss_pred hhCCHHHHHH----HHHhCCceEEEecCHHHHHHHHHHHHH-cCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHH--HH
Confidence 7665554433 333455679999999999999999998 7999999999999999999999999996 3454 99
Q ss_pred HhCcEeecCccc--hhhhHhhhchhhhHHhhhheEEEecc
Q 002339 896 MASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDFP 933 (934)
Q Consensus 896 ~~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~k 933 (934)
++||+++.++++ +..+ +.|||++|.|+++++.|.|++
T Consensus 754 ~aAD~Vl~~~~~~gI~~a-i~~GR~i~~ni~k~i~~~l~~ 792 (1034)
T 3ixz_A 754 NAADMILLDDNFASIVTG-VEQGRLIFDNLKKSIAYTLTK 792 (1034)
T ss_pred HhcCEEeccCCchHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999777 5556 889999999999999999875
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-94 Score=902.13 Aligned_cols=681 Identities=22% Similarity=0.251 Sum_probs=531.5
Q ss_pred CcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccC--C---C----CCccccchhhHHHHHHHHH
Q 002339 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPL--S---P----FSPVSMLLPLAIVVGVSMA 118 (934)
Q Consensus 48 ~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~--~---~----~~~~~~~~~l~~v~~~~~~ 118 (934)
..|+.+||+|.++.++...++ +.|++||.+|++++++++++++++.. . . ...+...++++++++++++
T Consensus 74 ~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 150 (1028)
T 2zxe_A 74 KEILARDGPNSLTPPPTTPEW---IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGC 150 (1028)
T ss_dssp HHHHHHHCCSCCCCCCCCCHH---HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHH
Confidence 357889999999988644433 78999999999999999999987641 1 0 0123345567788889999
Q ss_pred HHHHHHHHHhhhhhhh---ccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCC
Q 002339 119 KEALEDWRRFMQDKEV---NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDG 195 (934)
Q Consensus 119 ~~~~~~~~r~k~~~~~---n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtG 195 (934)
.++++++++.++.+.+ .+.+++|+ |||++++|++++|+|||||.|++||.|||||+|++++ .|+||||+|||
T Consensus 151 ~~~~qe~ka~~~~~~L~~l~~~~a~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~~~VdeS~LTG 225 (1028)
T 2zxe_A 151 FSYYQEAKSSRIMDSFKNMVPQQALVI-RDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAH----GCKVDNSSLTG 225 (1028)
T ss_dssp HHHHHTCCCCCHHHHHHTTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEE----EEEEECHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeeEEE-ECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeC----cEEEEcCccCC
Confidence 9999998888776554 45889999 8999999999999999999999999999999999944 38999999999
Q ss_pred CCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEec
Q 002339 196 ETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTG 275 (934)
Q Consensus 196 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG 275 (934)
||.|+.|.+++.. ..|++.+|++|+||.+.+ |++.|+|++||
T Consensus 226 ES~pv~K~~~~~~-------------------------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG 267 (1028)
T 2zxe_A 226 ESEPQTRSPEFSS-------------------------------------ENPLETRNIAFFSTNCVE-GTARGVVVYTG 267 (1028)
T ss_dssp CCSCEECCSSCCC-------------------------------------SSTTTCSSEECTTCEEEE-EEEEEEEEECG
T ss_pred CCcceecccCCCC-------------------------------------CCcccccceEEeCceEEc-ceEEEEEEEec
Confidence 9999999876432 114567889999998885 68999999999
Q ss_pred cchhhhh---ccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhH
Q 002339 276 HDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (934)
Q Consensus 276 ~~Tki~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (934)
.+|.+++ +...++.+++|+++.+++++.+++++.++++++.++++.+.. ..|
T Consensus 268 ~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-----~~~-------------------- 322 (1028)
T 2zxe_A 268 DRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG-----YSW-------------------- 322 (1028)
T ss_dssp GGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCH--------------------
T ss_pred cccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----CcH--------------------
Confidence 9996654 555677889999999999999999999988888877643211 123
Q ss_pred HHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceE
Q 002339 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (934)
Q Consensus 353 ~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 432 (934)
...+.+++.+++.+||++||++++++..+++.+| ++++++||+++++|+||++++||||||||||+|+|+
T Consensus 323 ~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~ 392 (1028)
T 2zxe_A 323 LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMT 392 (1028)
T ss_dssp HHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCE
T ss_pred HHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH----------hhCCceeccchHhhhhcCceEEeccCCCCCCCCeEE
Confidence 2456677888889999999999999999999998 789999999999999999999999999999999999
Q ss_pred EEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCcccccccccc
Q 002339 433 FLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDG 512 (934)
Q Consensus 433 ~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (934)
|.++++++..|.....+. ..+.
T Consensus 393 v~~~~~~~~~~~~~~~~~------------------------------------------------~~~~---------- 414 (1028)
T 2zxe_A 393 VAHMWFDNQIHEADTTEN------------------------------------------------QSGA---------- 414 (1028)
T ss_dssp EEEEEETTEEEECCCCTT------------------------------------------------CCSC----------
T ss_pred EEEEEECCeeeeccCCCC------------------------------------------------cccc----------
Confidence 999998877653221000 0000
Q ss_pred CCCCCCChhHHHHHHHHHhhcceeeecccCCCCc--eEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCC
Q 002339 513 NWLKEPNVDTLLLFFRILAICHTAIPELNEETGN--LTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590 (934)
Q Consensus 513 ~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~--~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 590 (934)
..+........++.++++||++..+.+.+... ..+..++|+|.||+++|+..|.....
T Consensus 415 --~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~------------------ 474 (1028)
T 2zxe_A 415 --AFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQG------------------ 474 (1028)
T ss_dssp --CCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHH------------------
T ss_pred --ccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHH------------------
Confidence 00112345567889999999988754322111 11236899999999999876421100
Q ss_pred ceeEEEEeEecCCCCCCceEEEEEEcC---CCcEEEEEcccchhhhHhhhcc---------ccccHHHHHHHHHHHHhcC
Q 002339 591 VEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGEAG 658 (934)
Q Consensus 591 ~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~G 658 (934)
....|++++.+||+|.||||+++++.+ ++++++|+||||+.|+++|+.. +.+.++.+.+++++|+.+|
T Consensus 475 ~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G 554 (1028)
T 2zxe_A 475 MRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLG 554 (1028)
T ss_dssp HHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcC
Confidence 134577889999999999999999974 5789999999999999999751 1234567888999999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEE
Q 002339 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (934)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ 738 (934)
+|||++|+|.++++++.++.+ . +++ ..+.+|+|++|+|+++++|++|++++++|++|+++||++|
T Consensus 555 ~RvL~~A~~~l~~~~~~~~~~--------~--~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~ 619 (1028)
T 2zxe_A 555 ERVLGFCHFALPEDKYNEGYP--------F--DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVI 619 (1028)
T ss_dssp CEEEEEEEEECCSTTSCTTCC--------C--CTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEE
T ss_pred CEEEEEEEEecCccccccccc--------c--chh-----hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEE
Confidence 999999999997654322100 0 110 0123578999999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhh
Q 002339 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (934)
Q Consensus 739 mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 818 (934)
|+|||+..||.++|++|||...+...+ . +.... ..... ...........+++|..+.
T Consensus 620 miTGD~~~tA~~ia~~lgi~~~~~~~i-------~------------~~~~~---~~~~~-~~~~~~~~~~~vi~G~~l~ 676 (1028)
T 2zxe_A 620 MVTGDHPITAKAIAKGVGIISEGNETI-------E------------DIAAR---LNIPI-GQVNPRDAKACVVHGSDLK 676 (1028)
T ss_dssp EECSSCHHHHHHHHHHHTSSCTTCCCH-------H------------HHHHH---TTCCG-GGSCGGGCCEEEEEHHHHT
T ss_pred EECCCCHHHHHHHHHHcCCCCCCchhH-------H------------HHHhh---cCcch-hhccccccceEEEEcHHhh
Confidence 999999999999999999986443211 0 00000 00000 0011112235788999887
Q ss_pred HhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc--ccchhhHHH
Q 002339 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQAVM 896 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~~~a~~ 896 (934)
...++++.+ +...+...+|||++|+||..+|+.+++ .|+.|+|+|||.||++||+.|||||||+ |.+. |++
T Consensus 677 ~~~~~~l~~----~~~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~--ak~ 749 (1028)
T 2zxe_A 677 DLSTEVLDD----ILHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDV--SKQ 749 (1028)
T ss_dssp TCCHHHHHH----HHHHCSEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHH--HHH
T ss_pred hCCHHHHHH----HHhhCCcEEEEEcCHHHHHHHHHHHHh-CCCEEEEEcCCcchHHHHHhCCceEEeCCccCHH--HHH
Confidence 665544433 333455679999999999999999998 7899999999999999999999999996 5666 999
Q ss_pred hCcEeecCccc--hhhhHhhhchhhhHHhhhheEEEecc
Q 002339 897 ASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDFP 933 (934)
Q Consensus 897 ~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~k 933 (934)
+||+++.+.++ +.++ +.|||++|.|+++++.|.|++
T Consensus 750 aAD~Vl~~~~~~~I~~~-i~~gR~i~~ni~k~i~~~l~~ 787 (1028)
T 2zxe_A 750 AADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTS 787 (1028)
T ss_dssp HCSEEETTCCTHHHHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred hcCEEecCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 99999998555 8888 899999999999999998875
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-92 Score=886.66 Aligned_cols=704 Identities=22% Similarity=0.236 Sum_probs=523.3
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc-CCCC------CccccchhhHHHHHHHHHH
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPF------SPVSMLLPLAIVVGVSMAK 119 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~-~~~~------~~~~~~~~l~~v~~~~~~~ 119 (934)
...|+.+||+|.++.+++..++ +.|++||++++++++++++++++++ +.+. .|+.. +.++++++++++.
T Consensus 30 ~~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~i 105 (995)
T 3ar4_A 30 VKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEP-FVILLILIANAIV 105 (995)
T ss_dssp HHHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHh-HHhhHHHHHHHHH
Confidence 3467889999999998764443 8999999999999999999999876 3221 22222 3344555667777
Q ss_pred HHHHHHHHhhhhh---hhccceEEEEeCCCe--EEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCC
Q 002339 120 EALEDWRRFMQDK---EVNARKVSVHVGNGV--FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (934)
Q Consensus 120 ~~~~~~~r~k~~~---~~n~~~~~V~~r~g~--~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~Lt 194 (934)
..+++++..++.+ .+.+.+++|+ |||. +++|+|++|+|||||+|++||.|||||+|++.+. |.|+||||+||
T Consensus 106 ~~~qe~~a~~al~~L~~~~~~~a~V~-R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LT 182 (995)
T 3ar4_A 106 GVWQERNAENAIEALKEYEPEMGKVY-RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILT 182 (995)
T ss_dssp HHHHHHHCCCHHHHHGGGSCSEEEEE-BTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCeEEEE-eCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEee--ceEEEEccccc
Confidence 8888887766544 4456889999 7776 6999999999999999999999999999987544 56999999999
Q ss_pred CCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEe
Q 002339 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFT 274 (934)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~t 274 (934)
|||.|+.|.+++.. .+ ...+.+.+|++|+||.+.+ |+++|+|++|
T Consensus 183 GES~pv~K~~~~~~-------------------~~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~t 227 (995)
T 3ar4_A 183 GESVSVIKHTEPVP-------------------DP---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATT 227 (995)
T ss_dssp CCCSCEEECCSCCC-------------------CT---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEEC
T ss_pred CCCcceeccccccC-------------------Cc---------------ccCcccccceEecCCEEEc-ceEEEEEEEc
Confidence 99999999886432 00 1124577899999999986 7899999999
Q ss_pred ccchhhhhc---cCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeccc-CCCccccCCCCCccccCCCCCch
Q 002339 275 GHDSKVMQN---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQ-TPQWWYLKPKETDVYFNPGKPLV 350 (934)
Q Consensus 275 G~~Tki~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 350 (934)
|.+|++++. ...++.+++|+|+.+++++.+++++++++|++.++++..+.... ....|+ .
T Consensus 228 G~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~ 291 (995)
T 3ar4_A 228 GVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWI----------------R 291 (995)
T ss_dssp GGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHH----------------H
T ss_pred CcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHH----------------H
Confidence 999977554 45677889999999999999999988888887766543211000 000121 1
Q ss_pred hHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecc
Q 002339 351 PGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQ 430 (934)
Q Consensus 351 ~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~ 430 (934)
.....|..++.+++.+|||+||++++++..+++.+| +++++++|+++++|+||++++||||||||||+|+
T Consensus 292 ~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~ 361 (995)
T 3ar4_A 292 GAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 361 (995)
T ss_dssp HHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCC
T ss_pred HHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHh----------ccCCcEeccchhhhhhcCceEEEecCCCCcccCc
Confidence 223456788899999999999999999999999988 7889999999999999999999999999999999
Q ss_pred eEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCcccccccc
Q 002339 431 MDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLM 510 (934)
Q Consensus 431 m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (934)
|+|.++++.+..++..... .+...++ .+ .........
T Consensus 362 m~v~~~~~~~~~~~~~~~~-----------------------------~~~~~~~-------~~-------~~p~~~~~~ 398 (995)
T 3ar4_A 362 MSVCKMFIIDKVDGDFCSL-----------------------------NEFSITG-------ST-------YAPEGEVLK 398 (995)
T ss_dssp CEEEEEEEEEEEETTEEEE-----------------------------EEEEECC-------SS-------SSSCCCEEE
T ss_pred eEEEEEEecCcccCccccc-----------------------------ceeeccC-------CC-------cCCcccccc
Confidence 9999998765433210000 0000000 00 000000000
Q ss_pred ccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCC
Q 002339 511 DGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590 (934)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 590 (934)
.+........+.+..++.++++||++....++..+ .....++|+|.||+.++++.|+ +.... ..+...+........
T Consensus 399 ~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~-~~~~~g~p~E~Al~~~a~~~g~-~~~~~-~~i~~~~~~~~~~~~ 475 (995)
T 3ar4_A 399 NDKPIRSGQFDGLVELATICALCNDSSLDFNETKG-VYEKVGEATETALTTLVEKMNV-FNTEV-RNLSKVERANACNSV 475 (995)
T ss_dssp TTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTT-EEEEESCHHHHHHHHHHHHHCT-TCCCC-TTSCTTTSTTHHHHH
T ss_pred ccccccccccHHHHHHHHHHHHcCCCcccccCCCC-ceeecCCccHHHHHHHHHHcCC-ccccc-cccccccccccchhh
Confidence 00001112334577889999999998765433222 2223589999999999999887 21110 000000000000000
Q ss_pred ceeEEEEeEecCCCCCCceEEEEEEcCCC-----cEEEEEcccchhhhHhhhcc---------ccccHHHHHHHHHHH--
Q 002339 591 VEREFKILNLLDFTSKRKRMSVIVRDEDG-----QILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEY-- 654 (934)
Q Consensus 591 ~~~~~~il~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~-- 654 (934)
....|++++.+||+|+||||||+++.++| ++.+|+||||+.|+++|+.. +++.++.+.+++++|
T Consensus 476 ~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 555 (995)
T 3ar4_A 476 IRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGT 555 (995)
T ss_dssp HHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHH
T ss_pred hhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHh
Confidence 13569999999999999999999998666 68999999999999999752 123456788889999
Q ss_pred HhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcC
Q 002339 655 GEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAG 734 (934)
Q Consensus 655 ~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aG 734 (934)
+.+|+|||++|||+++..+. ...+ .+ ...++.+|+|++|+|+++++|++|++++++|+.|+++|
T Consensus 556 a~~GlRvLa~A~k~~~~~~~----------~~~~-~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~G 619 (995)
T 3ar4_A 556 GRDTLRCLALATRDTPPKRE----------EMVL-DD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAG 619 (995)
T ss_dssp STTCCEEEEEEEESSCCCGG----------GCCT-TC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTT
T ss_pred hhccceEEEEEEEecCcccc----------cccc-cc-----chhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcC
Confidence 99999999999999864210 0000 01 01236678999999999999999999999999999999
Q ss_pred CeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcC
Q 002339 735 LKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEG 814 (934)
Q Consensus 735 Ikv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 814 (934)
|++||+|||+..||.++|++|||...+..+ . ..+++|
T Consensus 620 i~v~miTGD~~~ta~~ia~~lgi~~~~~~i--------~-----------------------------------~~~~~g 656 (995)
T 3ar4_A 620 IRVIMITGDNKGTAIAICRRIGIFGENEEV--------A-----------------------------------DRAYTG 656 (995)
T ss_dssp CEEEEEESSCHHHHHHHHHHHTSSCTTCCC--------T-----------------------------------TTEEEH
T ss_pred CEEEEECCCCHHHHHHHHHHcCcCCCCCcc--------c-----------------------------------ceEEEc
Confidence 999999999999999999999997643210 0 014566
Q ss_pred hhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhh
Q 002339 815 KTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQ 893 (934)
Q Consensus 815 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~ 893 (934)
..+.....+++.+.+. +..+|||++|+||..+|+.+++ .|+.|+|+|||.||++||+.||+||||+ |.+.
T Consensus 657 ~~~~~l~~~~~~~~~~------~~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~-- 727 (995)
T 3ar4_A 657 REFDDLPLAEQREACR------RACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPALKKAEIGIAMGSGTAV-- 727 (995)
T ss_dssp HHHHTSCHHHHHHHHH------HCCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHHHHSTEEEEETTSCHH--
T ss_pred hhhhhCCHHHHHHHHh------hCcEEEEeCHHHHHHHHHHHHH-CCCEEEEEcCCchhHHHHHHCCeEEEeCCCCHH--
Confidence 6655444433333322 2459999999999999999998 6999999999999999999999999994 6666
Q ss_pred HHHhCcEeecCccc--hhhhHhhhchhhhHHhhhheEEEecc
Q 002339 894 AVMASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDFP 933 (934)
Q Consensus 894 a~~~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~k 933 (934)
|+++||+++.++++ +.++ +.|||++|.|+++++.|+|++
T Consensus 728 ak~aAd~vl~~~~~~~i~~~-i~~GR~~~~~i~k~i~~~l~~ 768 (995)
T 3ar4_A 728 AKTASEMVLADDNFSTIVAA-VEEGRAIYNNMKQFIRYLISS 768 (995)
T ss_dssp HHHTCSEEETTCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987555 7887 899999999999999998875
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-89 Score=830.48 Aligned_cols=594 Identities=19% Similarity=0.226 Sum_probs=477.8
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHH
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~ 126 (934)
...|+.+||+|.++.+++++| +.|++||..|++++++++++++++. ..|... ..++++++++++.+++++++
T Consensus 93 a~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~---g~~~~~-~~i~~vv~i~~~i~~~qe~~ 164 (920)
T 1mhs_A 93 VVQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGL---EDWVDF-GVICGLLLLNAVVGFVQEFQ 164 (920)
T ss_dssp HHHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTC---SCSSHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHH---HhHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 346788999999999888877 6788999999999999999998873 344443 44556778889999999999
Q ss_pred Hhhhhhhhcc---ceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeee
Q 002339 127 RFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (934)
Q Consensus 127 r~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~ 203 (934)
+.++.+.+++ .+++|+ |||++++|++++|+|||||.|++||.|||||+|++++ +.+.||||+|||||.|+.|.
T Consensus 165 a~~a~~~L~~l~~~~a~V~-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~---~~l~VDES~LTGES~PV~K~ 240 (920)
T 1mhs_A 165 AGSIVDELKKTLALKAVVL-RDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDD---AFLQVDQSALTGESLAVDKH 240 (920)
T ss_dssp HHHHHHTTTTCCCSSCEEE-CSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEES---SCCEEBCTTTSSCCCCEECC
T ss_pred HHHHHHHhhccCCCEEEEE-ECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecC---ceeeeeccccCCCCcceEec
Confidence 9988776654 789999 8999999999999999999999999999999999943 12699999999999999998
Q ss_pred cccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhhc
Q 002339 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQN 283 (934)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~ 283 (934)
+++.. |+||.+.+|. +.++|++||.+|.+++.
T Consensus 241 ~gd~v---------------------------~sGT~v~~G~---------------------~~~~V~~tG~~T~~g~I 272 (920)
T 1mhs_A 241 KGDQV---------------------------FASSAVKRGE---------------------AFVVITATGDNTFVGRA 272 (920)
T ss_dssp SSCEE---------------------------CSCBCCSCCC---------------------EEEEEEECSTTCSTTTT
T ss_pred CCCee---------------------------ecCceEecce---------------------EEEEEEEeCCcCHHHHH
Confidence 76544 7777777776 99999999999987764
Q ss_pred ---cCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHHH
Q 002339 284 ---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTAL 360 (934)
Q Consensus 284 ---~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 360 (934)
.+.++.+++++++.++++..++++++++++++.++.+ |+.. ..+...+.+++
T Consensus 273 ~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~-----------~~~~--------------~~~~~~l~~av 327 (920)
T 1mhs_A 273 AALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSS-----------FYRS--------------NPIVQILEFTL 327 (920)
T ss_dssp TSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----------TTTT--------------CCHHHHHHHHH
T ss_pred HHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HhcC--------------CcHHHHHHHHH
Confidence 4466777899999999999988877777666554432 1100 01235677889
Q ss_pred HHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcC
Q 002339 361 ILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAG 440 (934)
Q Consensus 361 ~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~ 440 (934)
.+++.+|||+||++++++..+++.++ +++++++|+++.+|+||++++||||||||||+|+|+|.+++..+
T Consensus 328 ~llV~aiP~aLp~~vti~la~g~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~ 397 (920)
T 1mhs_A 328 AITIIGVPVGLPAVVTTTMAVGAAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVA 397 (920)
T ss_dssp HHHHHHSCCCHHHHHHHHHHHHHHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCS
T ss_pred HHHHHhCchhHHHHHHHHHHHHHHHH----------HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecC
Confidence 99999999999999999999999998 78899999999999999999999999999999999998764311
Q ss_pred eeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCCh
Q 002339 441 TAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNV 520 (934)
Q Consensus 441 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (934)
. +. +
T Consensus 398 g-~~-------------------------------------------------------------------------~-- 401 (920)
T 1mhs_A 398 G-VD-------------------------------------------------------------------------P-- 401 (920)
T ss_dssp C-CC-------------------------------------------------------------------------C--
T ss_pred C-CC-------------------------------------------------------------------------H--
Confidence 0 00 0
Q ss_pred hHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEe
Q 002339 521 DTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNL 600 (934)
Q Consensus 521 ~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~ 600 (934)
.+++.+.++|+.... ..+||.|.|+++++++.+... .....|++++.
T Consensus 402 ---~~ll~~a~l~~~~~~-----------~~~~P~e~Al~~~~~~~~~~~-------------------~~~~~~~~~~~ 448 (920)
T 1mhs_A 402 ---EDLMLTACLAASRKK-----------KGIDAIDKAFLKSLKYYPRAK-------------------SVLSKYKVLQF 448 (920)
T ss_dssp ---THHHHHHHHSCCCSS-----------CSCCSHHHHHHHHHHHSSSCC-------------------GGGSCCCEEEE
T ss_pred ---HHHHHHHHHhcCCcc-----------cCCChHHHHHHHHHHhcccch-------------------hhccccceeEE
Confidence 034556677765311 014999999999998765310 01345778899
Q ss_pred cCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhcc---ccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHH
Q 002339 601 LDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---GRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAW 677 (934)
Q Consensus 601 ~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~ 677 (934)
+||+|.||||+++++.++|+.++|+||||+.|+++|... +.+..+.+.+.+++|+.+|+||+++|+|..
T Consensus 449 ~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~-------- 520 (920)
T 1mhs_A 449 HPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-------- 520 (920)
T ss_dssp EEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS--------
T ss_pred eeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc--------
Confidence 999999999999998888888999999999999999752 223456778889999999999999998731
Q ss_pred HHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCc
Q 002339 678 NSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (934)
Q Consensus 678 ~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (934)
|.+++|+|+++++|++|++++++|++|+++||++||+|||+..||.++|+++||
T Consensus 521 --------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI 574 (920)
T 1mhs_A 521 --------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL 574 (920)
T ss_dssp --------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTS
T ss_pred --------------------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCC
Confidence 468999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccC
Q 002339 758 LRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECA 837 (934)
Q Consensus 758 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~ 837 (934)
..... +... ++++|.. ....+++ ..... +
T Consensus 575 ~~~~~-----~~~~--------------------------------------~~~~g~~--~~~~~el----~~~~~--~ 603 (920)
T 1mhs_A 575 GTNIY-----NAER--------------------------------------LGLGGGG--DMPGSEV----YDFVE--A 603 (920)
T ss_dssp SCSCC-----CSSS--------------------------------------SSSCBCC--CGGGGGG----GTTTT--T
T ss_pred Ccccc-----Cccc--------------------------------------eeecCcc--cCCHHHH----HHHHh--h
Confidence 64210 0000 0111110 0001111 11111 2
Q ss_pred ceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcEeecCccc--hhhhHhh
Q 002339 838 SVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDFSIAQFRF--LERLLVV 914 (934)
Q Consensus 838 ~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~ii~~~~~--l~~lll~ 914 (934)
..+|+|++|+||..+|+.+++ .|+.|+|+|||.||++||+.|||||||+ |++. |+++||+++.+.++ +..+ +.
T Consensus 604 ~~V~arv~P~~K~~iV~~Lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADiVl~~~~~~~I~~a-i~ 679 (920)
T 1mhs_A 604 ADGFAEVFPQHKYNVVEILQQ-RGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDA--ARSAADIVFLAPGLGAIIDA-LK 679 (920)
T ss_dssp TSCEESCCSTHHHHHHHHHHT-TTCCCEECCCCGGGHHHHHHSSEEEEETTSCHH--HHHSSSEEESSCCSHHHHHH-HH
T ss_pred CeEEEEeCHHHHHHHHHHHHh-CCCeEEEEcCCcccHHHHHhCCcCcccccccHH--HHHhcCeEEcCCCHHHHHHH-HH
Confidence 348999999999999999998 7999999999999999999999999995 5565 99999999998666 7887 89
Q ss_pred hchhhhHHhhhheEEEecc
Q 002339 915 HGHWCYKRIAQMVIIKDFP 933 (934)
Q Consensus 915 ~Gr~~~~~i~~~i~~~~~k 933 (934)
+||++|+|+++++.|.++.
T Consensus 680 ~gR~~~~ni~k~i~~~l~~ 698 (920)
T 1mhs_A 680 TSRQIFHRMYAYVVYRIAL 698 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887653
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-88 Score=827.06 Aligned_cols=600 Identities=19% Similarity=0.205 Sum_probs=468.0
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCC----CCCccccchhhHHHHHHHHHHHHH
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLS----PFSPVSMLLPLAIVVGVSMAKEAL 122 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~----~~~~~~~~~~l~~v~~~~~~~~~~ 122 (934)
...|+.+||+|.++.+++++| +.|++||.+|++++++++++++++... +..|+.++ .++++++++.+.+++
T Consensus 38 ~~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~-~I~~~v~i~~~l~~~ 112 (885)
T 3b8c_A 38 GEDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFV-GIICLLVINSTISFI 112 (885)
T ss_dssp HHHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHH-HHHHHTTTTTTTTTT
T ss_pred HHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHH-HHHHHHHHHHHHHHH
Confidence 446889999999999987776 567789999999999999999987511 11444443 455566677777888
Q ss_pred HHHHHhhhhhhh---ccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcc
Q 002339 123 EDWRRFMQDKEV---NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNL 199 (934)
Q Consensus 123 ~~~~r~k~~~~~---n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~ 199 (934)
++++..++.+.+ .+.+++|+ |||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||.|
T Consensus 113 qe~ka~~al~~L~~~~~~~a~V~-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~P 187 (885)
T 3b8c_A 113 EENNAGNAAAALMAGLAPKTKVL-RDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLP 187 (885)
T ss_dssp TTTTTTTHHHHTTTSCSCCCCCC-CSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSC
T ss_pred HHHHHHHHHHHHhccCCCeEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcc
Confidence 888877766544 45789999 89999999999999999999999999999999999432 58999999999999
Q ss_pred eeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchh
Q 002339 200 KVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSK 279 (934)
Q Consensus 200 ~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk 279 (934)
+.|.+++.. |+||.+.+|. +.++|++||.+|.
T Consensus 188 v~K~~g~~v---------------------------~~GT~v~~G~---------------------~~~~V~~tG~~T~ 219 (885)
T 3b8c_A 188 VTKHPGQEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTF 219 (885)
T ss_dssp CCBSSCCCC---------------------------CSCCCCCSCC---------------------CCCBCCSCTTTTT
T ss_pred eEecCCCcc---------------------------ccCeEEeeeE---------------------EEEEEEEcCcccH
Confidence 999886544 7777777776 9999999999998
Q ss_pred hhhccC--CCCCccchHHHHHHHHHHHHHHH-HHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHH
Q 002339 280 VMQNAT--TSPSKRSGIEKKMDKIIFILFAI-LVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356 (934)
Q Consensus 280 i~~~~~--~~~~k~s~l~~~~~~~~~~~~~~-~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (934)
+++..+ ....+++++++.++++..+++++ +++++++.++++.+.. ..| ...+
T Consensus 220 ~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--------------------~~~~ 274 (885)
T 3b8c_A 220 FGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQR-----RKY--------------------RDGI 274 (885)
T ss_dssp STTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTTTC-----SCS--------------------TTHH
T ss_pred HHHHHHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----CcH--------------------HHHH
Confidence 876543 12567899999999998774432 2223332222211100 011 1367
Q ss_pred HHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEE
Q 002339 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKC 436 (934)
Q Consensus 357 ~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~ 436 (934)
.+++.+++.+|||+||++++++..+++.++ +++++++|+++.+|+||++++||||||||||+|+|+|.++
T Consensus 275 ~~~v~llv~aiP~aLp~~vti~la~g~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~ 344 (885)
T 3b8c_A 275 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKN 344 (885)
T ss_dssp HHHHHHTTTTCCSSTTTHHHHTTTHHHHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEE
Confidence 889999999999999999999999999988 8999999999999999999999999999999999998632
Q ss_pred EEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCC
Q 002339 437 SVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLK 516 (934)
Q Consensus 437 ~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (934)
.+. .++.+
T Consensus 345 ~~~--~~~~~---------------------------------------------------------------------- 352 (885)
T 3b8c_A 345 LVE--VFCKG---------------------------------------------------------------------- 352 (885)
T ss_dssp CCC--SSCSS----------------------------------------------------------------------
T ss_pred EEe--ccCCC----------------------------------------------------------------------
Confidence 210 01000
Q ss_pred CCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEE
Q 002339 517 EPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFK 596 (934)
Q Consensus 517 ~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 596 (934)
....+++...++|+... ++||.|.|+++++.+.. . ....|+
T Consensus 353 ----~~~~~ll~~aa~~~~~~-------------~~~p~~~Al~~~~~~~~---------~-------------~~~~~~ 393 (885)
T 3b8c_A 353 ----VEKDQVLLFAAMASRVE-------------NQDAIDAAMVGMLADPK---------E-------------ARAGIR 393 (885)
T ss_dssp ----TTHHHHHHHHHHHCCSS-------------SCCSHHHHHHHTTCCTT---------C-------------CCCSSC
T ss_pred ----CCHHHHHHHHHHHhCCC-------------CCCchHHHHHHHhhchh---------h-------------HhhcCc
Confidence 00124566777887531 37999999998764210 0 123466
Q ss_pred EeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHH
Q 002339 597 ILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSA 676 (934)
Q Consensus 597 il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~ 676 (934)
.++.+||+|.||||+++++..+|+.++|+||||+.|+++|+.. ...++.+.+.+++++.+|+||+++|+|++++++
T Consensus 394 ~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~--- 469 (885)
T 3b8c_A 394 EVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKAS-NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT--- 469 (885)
T ss_dssp CBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCC-STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS---
T ss_pred eeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCc-hhhHHHHHHHHHHHHhCCCeEEEEEEecccccc---
Confidence 7889999999999999998778888999999999999999742 234556788899999999999999999886531
Q ss_pred HHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcC
Q 002339 677 WNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACS 756 (934)
Q Consensus 677 ~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~g 756 (934)
+ +..|++++|+|+++++||+||+++++|++|+++||+++|+|||+..||.++|+++|
T Consensus 470 ---------------~--------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lG 526 (885)
T 3b8c_A 470 ---------------K--------ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 526 (885)
T ss_dssp ---------------S--------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTT
T ss_pred ---------------c--------cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhC
Confidence 0 24578999999999999999999999999999999999999999999999999999
Q ss_pred cccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhh-HHHHHHHHhhhhc
Q 002339 757 LLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALE-DDMKHHFLGLAVE 835 (934)
Q Consensus 757 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~-~~~~~~~~~~~~~ 835 (934)
|...... .. ++.|.+++..+. .++.+...
T Consensus 527 i~~~~~~-----~~----------------------------------------~l~g~~~~~~~~~~~l~~~~~----- 556 (885)
T 3b8c_A 527 MGTNMYP-----SS----------------------------------------ALLGTHKDANLASIPVEELIE----- 556 (885)
T ss_dssp CTTCCST-----TS----------------------------------------SCCBGGGGTTSCCSCHHHHHH-----
T ss_pred CccccCC-----cc----------------------------------------eeeccccccccchhHHHHHHh-----
Confidence 9642100 00 112222221000 01111111
Q ss_pred cCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcEeecCccc--hhhhH
Q 002339 836 CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDFSIAQFRF--LERLL 912 (934)
Q Consensus 836 ~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~ii~~~~~--l~~ll 912 (934)
+..+|+|++|+||.++|+.+|+ .|+.|+|+|||.||++||+.|||||||+ |.+. |+++||+++.++++ +..+
T Consensus 557 -~~~v~arv~P~~K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADivl~~~~~~~I~~a- 631 (885)
T 3b8c_A 557 -KADGFAGVFPEHKYEIVKKLQE-RKHIVGMTGDGVNDAPALKKADIGIAVADATDA--ARGASDIVLTEPGLSVIISA- 631 (885)
T ss_dssp -TSCCEECCCHHHHHHHHHHHHH-TTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHH--HGGGCSSCCSSCSHHHHTHH-
T ss_pred -hCcEEEEECHHHHHHHHHHHHH-CCCeEEEEcCCchhHHHHHhCCEeEEeCCccHH--HHHhcceeeccCchhHHHHH-
Confidence 2348999999999999999998 7999999999999999999999999996 4555 89999999998666 6777
Q ss_pred hhhchhhhHHhhhheEEEec
Q 002339 913 VVHGHWCYKRIAQMVIIKDF 932 (934)
Q Consensus 913 l~~Gr~~~~~i~~~i~~~~~ 932 (934)
+.+||++|+|+++++.|.+.
T Consensus 632 i~~gR~~~~ni~~~i~~~l~ 651 (885)
T 3b8c_A 632 VLTSRAIFQRMKNYTIYAVS 651 (885)
T ss_dssp HHTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999988765
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-71 Score=663.36 Aligned_cols=488 Identities=19% Similarity=0.240 Sum_probs=403.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhhhhhhc------cceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEee
Q 002339 106 LLPLAIVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSS 179 (934)
Q Consensus 106 ~~~l~~v~~~~~~~~~~~~~~r~k~~~~~n------~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s 179 (934)
+-..++++++..+.+++|.+.++++.+.++ +.+++|+++||++++|++++|+|||+|+|++||.|||||+|++
T Consensus 188 fe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~- 266 (736)
T 3rfu_A 188 FEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE- 266 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEE-
Confidence 333445566777888999998888755443 5788888569999999999999999999999999999999998
Q ss_pred cCCCceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecce
Q 002339 180 SYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDS 259 (934)
Q Consensus 180 ~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs 259 (934)
|.++||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 267 ----G~~~VDES~LTGES~Pv~K~~gd~v---------------------------~~Gt~~~~G~-------------- 301 (736)
T 3rfu_A 267 ----GRSFVDESMVTGEPIPVAKEASAKV---------------------------IGATINQTGS-------------- 301 (736)
T ss_dssp ----SCEEEECSSSTTCSSCEEECTTCEE---------------------------CTTCEEESCC--------------
T ss_pred ----CceEeeecccCCccccEEeccCCcC---------------------------CCceEeccce--------------
Confidence 8899999999999999999988766 7888888887
Q ss_pred EeecCCeEEEEEEEeccchh---hhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCC
Q 002339 260 KLRNTAHVYGSVIFTGHDSK---VMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKP 336 (934)
Q Consensus 260 ~l~nt~~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~ 336 (934)
+.+.|++||.+|. +.++..+++.+++|+|+.+++++.++++++++++++++++|.++.... .|
T Consensus 302 -------~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~---~~---- 367 (736)
T 3rfu_A 302 -------FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP---AL---- 367 (736)
T ss_dssp -------CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS---ST----
T ss_pred -------EEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc---hH----
Confidence 9999999999994 455556777888999999999999999999999999988876543210 12
Q ss_pred CCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccce
Q 002339 337 KETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416 (934)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~ 416 (934)
...+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||++|
T Consensus 368 ----------------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~alE~l~~v~ 421 (736)
T 3rfu_A 368 ----------------SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG----------AQSGVLIKNAEALERMEKVN 421 (736)
T ss_dssp ----------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH----------HHTTEEESCHHHHHHHTSCC
T ss_pred ----------------HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH----------hhcceeechHHHHHHhcCCC
Confidence 2578889999999999999999999999999988 78999999999999999999
Q ss_pred EEEecCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcc
Q 002339 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFK 496 (934)
Q Consensus 417 ~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (934)
+||||||||||+|+|.|.++...+.. ..
T Consensus 422 ~i~fDKTGTLT~g~~~v~~i~~~~~~----~~------------------------------------------------ 449 (736)
T 3rfu_A 422 TLVVDKTGTLTEGHPKLTRIVTDDFV----ED------------------------------------------------ 449 (736)
T ss_dssp EEEECCBTTTBCSSCEEEEEEESSSC----HH------------------------------------------------
T ss_pred EEEEeCCCCCcCCceEEEEEEecCCC----HH------------------------------------------------
Confidence 99999999999999999998732210 00
Q ss_pred cccCCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCC
Q 002339 497 RRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQS 576 (934)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~ 576 (934)
+++...+.+ ++.++||++.|+++++++.|+.+.
T Consensus 450 ----------------------------~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~~~----- 482 (736)
T 3rfu_A 450 ----------------------------NALALAAAL--------------EHQSEHPLANAIVHAAKEKGLSLG----- 482 (736)
T ss_dssp ----------------------------HHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCCCC-----
T ss_pred ----------------------------HHHHHHHHH--------------hhcCCChHHHHHHHHHHhcCCCcc-----
Confidence 111111111 122579999999999998765431
Q ss_pred eEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHh
Q 002339 577 SVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGE 656 (934)
Q Consensus 577 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 656 (934)
...+|++.+++... .. .+|+ .+.+|+++.+.+.... ...+.+..++++.
T Consensus 483 ----------------------~~~~f~~~~g~gv~-~~-~~g~--~~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~ 531 (736)
T 3rfu_A 483 ----------------------SVEAFEAPTGKGVV-GQ-VDGH--HVAIGNARLMQEHGGD-----NAPLFEKADELRG 531 (736)
T ss_dssp ----------------------CCSCCCCCTTTEEE-EC-SSSS--CEEEESHHHHHHHCCC-----CHHHHHHHHHHHH
T ss_pred ----------------------CcccccccCCceEE-EE-ECCE--EEEEcCHHHHHHcCCC-----hhHHHHHHHHHHh
Confidence 13456666655322 22 2333 2456999877553221 2345677889999
Q ss_pred cCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCe
Q 002339 657 AGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLK 736 (934)
Q Consensus 657 ~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIk 736 (934)
+|+|++++|+ |.+++|+++++|++|++++++|++|+++|++
T Consensus 532 ~G~~vl~va~---------------------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~ 572 (736)
T 3rfu_A 532 KGASVMFMAV---------------------------------------DGKTVALLVVEDPIKSSTPETILELQQSGIE 572 (736)
T ss_dssp TTCEEEEEEE---------------------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCE
T ss_pred cCCeEEEEEE---------------------------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCe
Confidence 9999999995 6689999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChh
Q 002339 737 IWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKT 816 (934)
Q Consensus 737 v~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~ 816 (934)
++|+|||+..+|..+|+++|+..
T Consensus 573 v~mlTGd~~~~a~~ia~~lgi~~--------------------------------------------------------- 595 (736)
T 3rfu_A 573 IVMLTGDSKRTAEAVAGTLGIKK--------------------------------------------------------- 595 (736)
T ss_dssp EEEECSSCHHHHHHHHHHHTCCC---------------------------------------------------------
T ss_pred EEEECCCCHHHHHHHHHHcCCCE---------------------------------------------------------
Confidence 99999999999999999999852
Q ss_pred hhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEE-cccchhhHH
Q 002339 817 LAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGMQAV 895 (934)
Q Consensus 817 l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam-~~~e~~~a~ 895 (934)
++++++|++|..+|+.+++ .++.|+|+|||.||++||+.||+|||| +|.+. ++
T Consensus 596 -----------------------v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~--a~ 649 (736)
T 3rfu_A 596 -----------------------VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMGTGTDV--AI 649 (736)
T ss_dssp -----------------------EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEESSSCSH--HH
T ss_pred -----------------------EEEecCHHHHHHHHHHHHh-cCCEEEEEECChHhHHHHHhCCEEEEeCCccHH--HH
Confidence 8899999999999999998 789999999999999999999999999 46666 99
Q ss_pred HhCcEeecCccc--hhhhHhhhchhhhHHhhhheEEEec
Q 002339 896 MASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDF 932 (934)
Q Consensus 896 ~~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~ 932 (934)
++||+++.+.+. +..+ +.+||..++++++++.|.|.
T Consensus 650 ~~AD~vl~~~~~~~i~~a-i~~sr~t~~~i~qnl~~a~~ 687 (736)
T 3rfu_A 650 ESAGVTLLHGDLRGIAKA-RRLSESTMSNIRQNLFFAFI 687 (736)
T ss_dssp HHCSEEECSCCSTTHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCEEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 999999987444 7777 89999999999999988763
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-69 Score=645.45 Aligned_cols=479 Identities=19% Similarity=0.231 Sum_probs=392.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhh------hccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCC
Q 002339 109 LAIVVGVSMAKEALEDWRRFMQDKE------VNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (934)
Q Consensus 109 l~~v~~~~~~~~~~~~~~r~k~~~~------~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~ 182 (934)
.++++++..+.+++|++.++++.+. +.+++++|+ |||++++|++++|+|||||+|++||.|||||+|++
T Consensus 99 ~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~---- 173 (645)
T 3j08_A 99 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---- 173 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE----
Confidence 3345555678889999998876443 345789999 89999999999999999999999999999999999
Q ss_pred CceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEee
Q 002339 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (934)
Q Consensus 183 ~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~ 262 (934)
|.++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 174 -G~~~VdeS~LTGES~Pv~K~~g~~v---------------------------~~Gt~~~~g~----------------- 208 (645)
T 3j08_A 174 -GESYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV----------------- 208 (645)
T ss_dssp -CCEEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC-----------------
T ss_pred -CcEEEEcccccCCCCceecCCCCEe---------------------------eccEEEecCc-----------------
Confidence 8899999999999999999887655 7777777666
Q ss_pred cCCeEEEEEEEeccch---hhhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCC
Q 002339 263 NTAHVYGSVIFTGHDS---KVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (934)
Q Consensus 263 nt~~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~ 339 (934)
+.+.|++||.+| ++.++.++++.+++++++.+++++.++++++++++++++++|.++... +|.
T Consensus 209 ----~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~----~~~------ 274 (645)
T 3j08_A 209 ----LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA----PLL------ 274 (645)
T ss_dssp ----EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSC----SCC------
T ss_pred ----EEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----cHH------
Confidence 999999999999 556677788889999999999999999999999999888765443211 111
Q ss_pred ccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEE
Q 002339 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (934)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~ 419 (934)
..+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||++++||
T Consensus 275 --------------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~ 330 (645)
T 3j08_A 275 --------------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVI 330 (645)
T ss_dssp --------------CTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTCCCCSSTTHHHHGGGCCEEE
T ss_pred --------------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HHCCeEecCchHHHHhhCCCEEE
Confidence 245557888899999999999999999999988 78999999999999999999999
Q ss_pred ecCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCccccc
Q 002339 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (934)
Q Consensus 420 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (934)
||||||||+|+|+|.++...+.. +
T Consensus 331 fDKTGTLT~~~~~v~~~~~~~~~------~-------------------------------------------------- 354 (645)
T 3j08_A 331 FDKTGTLTKGKPEVTDLVPLNGD------E-------------------------------------------------- 354 (645)
T ss_dssp EEGGGTSSSSCCEEEEEEESSSC------H--------------------------------------------------
T ss_pred EcCcccccCCCeEEEEEEeCCCC------H--------------------------------------------------
Confidence 99999999999999999764310 0
Q ss_pred CCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEE
Q 002339 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (934)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~ 579 (934)
.+++...+.|.. .+.||++.|+++++++.|+.+....
T Consensus 355 ------------------------~~~l~~aa~~e~--------------~s~hPla~Aiv~~a~~~g~~~~~~~----- 391 (645)
T 3j08_A 355 ------------------------RELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPE----- 391 (645)
T ss_dssp ------------------------HHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCC-----
T ss_pred ------------------------HHHHHHHHHHhh--------------cCCChhHHHHHHHHHhcCCCcCCcc-----
Confidence 123333343322 2579999999999999887542211
Q ss_pred EEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCC
Q 002339 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (934)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Gl 659 (934)
.++ +...+. +.. ..+.+|+++.+.+. +...++.+...+++++.+|+
T Consensus 392 --------------~~~--------~~~g~g-~~~-------~~v~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~g~ 437 (645)
T 3j08_A 392 --------------KVE--------VIAGEG-VVA-------DGILVGNKRLMEDF----GVAVSNEVELALEKLEREAK 437 (645)
T ss_dssp --------------CCE--------EETTTE-EEE-------TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHTTTC
T ss_pred --------------ceE--------EecCCc-eEE-------EEEEECCHHHHHhc----CCCccHHHHHHHHHHHhcCC
Confidence 111 000000 000 12456877665432 22344567788899999999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEE
Q 002339 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (934)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~m 739 (934)
|++++|+ |++++|+++++|++|++++++|++|+++|++++|
T Consensus 438 ~~l~va~---------------------------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~ 478 (645)
T 3j08_A 438 TAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGM 478 (645)
T ss_dssp CCEEEEE---------------------------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred eEEEEEE---------------------------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEE
Confidence 9999994 6789999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhH
Q 002339 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (934)
Q Consensus 740 lTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 819 (934)
+|||+..+|..+|+++|+..
T Consensus 479 ~TGd~~~~a~~ia~~lgi~~------------------------------------------------------------ 498 (645)
T 3j08_A 479 ITGDNWRSAEAISRELNLDL------------------------------------------------------------ 498 (645)
T ss_dssp ECSSCHHHHHHHHHHHTCSE------------------------------------------------------------
T ss_pred EeCCCHHHHHHHHHHcCCCE------------------------------------------------------------
Confidence 99999999999999999842
Q ss_pred hhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhC
Q 002339 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMAS 898 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~A 898 (934)
++++++|++|..+++.+++ . +.|+|+|||.||++||+.||+||+|+ +.+. ++++|
T Consensus 499 --------------------~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~A 554 (645)
T 3j08_A 499 --------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESG 554 (645)
T ss_dssp --------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEECCCSCC--SSCCS
T ss_pred --------------------EEEeCCHHhHHHHHHHHhh-C-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHH--HHHhC
Confidence 8899999999999999998 4 89999999999999999999999995 5666 99999
Q ss_pred cEeecCccc--hhhhHhhhchhhhHHhhhheEEEec
Q 002339 899 DFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDF 932 (934)
Q Consensus 899 D~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~ 932 (934)
|+++.+.++ +..+ +.+||+.|+|+++++.|.|+
T Consensus 555 D~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~ 589 (645)
T 3j08_A 555 DIVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALI 589 (645)
T ss_dssp SSEESSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 999976444 7777 88999999999999998875
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-69 Score=652.55 Aligned_cols=479 Identities=19% Similarity=0.245 Sum_probs=393.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhh------ccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCC
Q 002339 109 LAIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (934)
Q Consensus 109 l~~v~~~~~~~~~~~~~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~ 182 (934)
.++++++..+.+++|++.++++.+.+ .+.+++|+ |||++++|++++|+|||||+|++||.|||||+|++
T Consensus 177 ~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~---- 251 (723)
T 3j09_A 177 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---- 251 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE----
Confidence 34555566788899999988865443 45789999 89999999999999999999999999999999999
Q ss_pred CceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEee
Q 002339 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (934)
Q Consensus 183 ~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~ 262 (934)
|.++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 252 -G~~~VdeS~LTGES~pv~K~~g~~v---------------------------~~Gt~~~~g~----------------- 286 (723)
T 3j09_A 252 -GESYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV----------------- 286 (723)
T ss_dssp -CCEEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC-----------------
T ss_pred -CCeEEecccccCCCcceeecCCCee---------------------------ccceEEecCc-----------------
Confidence 8899999999999999999887655 6777776666
Q ss_pred cCCeEEEEEEEeccch---hhhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCC
Q 002339 263 NTAHVYGSVIFTGHDS---KVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (934)
Q Consensus 263 nt~~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~ 339 (934)
+.++|++||.+| ++.++.+.++.+++++++.+++++.++++++++++++++++|.++... +|
T Consensus 287 ----~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~----~~------- 351 (723)
T 3j09_A 287 ----LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA----PL------- 351 (723)
T ss_dssp ----EEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTC----TT-------
T ss_pred ----EEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----cH-------
Confidence 999999999999 556677788889999999999999999999999998887764432110 11
Q ss_pred ccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEE
Q 002339 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (934)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~ 419 (934)
...+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||++|+||
T Consensus 352 -------------~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~ 408 (723)
T 3j09_A 352 -------------LFAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVI 408 (723)
T ss_dssp -------------CCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHGGGCCEEE
T ss_pred -------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH----------HHCCeEEeChHHHHHhhcCCEEE
Confidence 1357778899999999999999999999999988 78999999999999999999999
Q ss_pred ecCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCccccc
Q 002339 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (934)
Q Consensus 420 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (934)
||||||||+|+|+|.++...+. + +
T Consensus 409 fDKTGTLT~g~~~v~~~~~~~~----~--~-------------------------------------------------- 432 (723)
T 3j09_A 409 FDKTGTLTKGKPEVTDLVPLNG----D--E-------------------------------------------------- 432 (723)
T ss_dssp EEHHHHTSCSCCEEEEEEESSS----C--H--------------------------------------------------
T ss_pred EcCCCccccCceEEEEEEeCCC----C--H--------------------------------------------------
Confidence 9999999999999999976431 0 0
Q ss_pred CCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEE
Q 002339 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (934)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~ 579 (934)
.+++...+.|.. .+.||++.|+++++++.|+.+...
T Consensus 433 ------------------------~~~l~~aa~~e~--------------~s~hP~~~Ai~~~a~~~~~~~~~~------ 468 (723)
T 3j09_A 433 ------------------------RELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEP------ 468 (723)
T ss_dssp ------------------------HHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSC------
T ss_pred ------------------------HHHHHHHHHHhc--------------cCCCchhHHHHHHHHhcCCCcCCc------
Confidence 123333333321 257999999999999988754221
Q ss_pred EEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCC
Q 002339 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (934)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Gl 659 (934)
..++.. + .+ .+.. ..+.+|+++.+.+. +....+.+...+++++.+|+
T Consensus 469 -------------~~~~~~---~-----g~-g~~~-------~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~g~ 515 (723)
T 3j09_A 469 -------------EKVEVI---A-----GE-GVVA-------DGILVGNKRLMEDF----GVAVSNEVELALEKLEREAK 515 (723)
T ss_dssp -------------CCCEEE---T-----TT-EEEE-------TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHTTTC
T ss_pred -------------cceEEe---c-----CC-ceEE-------EEEEECCHHHHHhc----CCCccHHHHHHHHHHHhcCC
Confidence 111100 0 00 0000 12456887665432 22244567788899999999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEE
Q 002339 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (934)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~m 739 (934)
|++++|+ |++++|+++++|++|++++++|+.|+++|++++|
T Consensus 516 ~~~~va~---------------------------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~ 556 (723)
T 3j09_A 516 TAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGM 556 (723)
T ss_dssp EEEEEEE---------------------------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEE
T ss_pred eEEEEEE---------------------------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEE
Confidence 9999994 6789999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhH
Q 002339 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (934)
Q Consensus 740 lTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 819 (934)
+|||+..+|..+|+++|+..
T Consensus 557 ~TGd~~~~a~~ia~~lgi~~------------------------------------------------------------ 576 (723)
T 3j09_A 557 ITGDNWRSAEAISRELNLDL------------------------------------------------------------ 576 (723)
T ss_dssp ECSSCHHHHHHHHHHHTCSE------------------------------------------------------------
T ss_pred ECCCCHHHHHHHHHHcCCcE------------------------------------------------------------
Confidence 99999999999999999842
Q ss_pred hhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhC
Q 002339 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMAS 898 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~A 898 (934)
++++++|++|..+++.+++ . +.|+|+|||.||++||+.||+||||+ |.+. ++++|
T Consensus 577 --------------------~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~A 632 (723)
T 3j09_A 577 --------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESG 632 (723)
T ss_dssp --------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECCCCSCC--SSCCS
T ss_pred --------------------EEccCCHHHHHHHHHHHhc-C-CeEEEEECChhhHHHHhhCCEEEEeCCCcHH--HHHhC
Confidence 8899999999999999998 4 89999999999999999999999994 6666 99999
Q ss_pred cEeecCccc--hhhhHhhhchhhhHHhhhheEEEec
Q 002339 899 DFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDF 932 (934)
Q Consensus 899 D~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~ 932 (934)
|+++.+.++ +..+ +.+||+.|+++++++.|.|+
T Consensus 633 D~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~ 667 (723)
T 3j09_A 633 DIVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALI 667 (723)
T ss_dssp SEECSSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 999976444 7777 88999999999999998875
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=8.9e-27 Score=248.15 Aligned_cols=137 Identities=23% Similarity=0.367 Sum_probs=119.1
Q ss_pred CceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHH
Q 002339 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKD 785 (934)
Q Consensus 706 dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 785 (934)
+-.+.|.+.+.|+++|++.++|+.|+++|++++|+|||+..++..+++.+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 445789999999999999999999999999999999999999999999988732
Q ss_pred hHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEE
Q 002339 786 NILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTL 865 (934)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~ 865 (934)
+|..+.|+.|..+++.++. .+..++
T Consensus 178 ------------------------------------------------------~f~~~~p~~k~~~~~~l~~-~~~~~~ 202 (263)
T 2yj3_A 178 ------------------------------------------------------YYSNLSPEDKVRIIEKLKQ-NGNKVL 202 (263)
Confidence 4445569999999999987 678899
Q ss_pred EEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcEee--cCccchhhhHhhhchhhhHHhhhh
Q 002339 866 AIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDFSI--AQFRFLERLLVVHGHWCYKRIAQM 926 (934)
Q Consensus 866 aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~ii--~~~~~l~~lll~~Gr~~~~~i~~~ 926 (934)
|||||.||++|++.||+||+++ +.+. +...||+++ .++..|..+ +..+|..+++++++
T Consensus 203 ~VGD~~~D~~aa~~Agv~va~g~~~~~--~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 203 MIGDGVNDAAALALADVSVAMGNGVDI--SKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPSN 263 (263)
Confidence 9999999999999999999995 4443 778899999 667778887 89999999998864
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.89 E-value=6.8e-22 Score=213.59 Aligned_cols=271 Identities=21% Similarity=0.290 Sum_probs=193.6
Q ss_pred CCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCC
Q 002339 397 SGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476 (934)
Q Consensus 397 ~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (934)
+++|+++|+++.+|.|++++.|+||||||||.+.+.+..+...+. . +
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----~--~--------------------------- 60 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----D--E--------------------------- 60 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----C--H---------------------------
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----C--H---------------------------
Confidence 789999999999999999999999999999999999988765431 0 0
Q ss_pred CCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhH
Q 002339 477 SGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDE 556 (934)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e 556 (934)
.+++.. |..+ + ..+.||.+
T Consensus 61 -----------------------------------------------~~~l~~---~~~~--e---------~~s~hp~~ 79 (287)
T 3a1c_A 61 -----------------------------------------------RELLRL---AAIA--E---------RRSEHPIA 79 (287)
T ss_dssp -----------------------------------------------HHHHHH---HHHH--T---------TTCCSHHH
T ss_pred -----------------------------------------------HHHHHH---HHHH--h---------hcCCCHHH
Confidence 011111 2111 0 12579999
Q ss_pred HHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhh
Q 002339 557 AAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRL 636 (934)
Q Consensus 557 ~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~ 636 (934)
.|+.++++..|+..... ..+..+ . .. ++. . ..+.+|.++.+...
T Consensus 80 ~a~~~~~~~~g~~~~~~-------------------~~~~~~---~----G~--~~~--~-----~~~~~g~~~~~~~~- 123 (287)
T 3a1c_A 80 EAIVKKALEHGIELGEP-------------------EKVEVI---A----GE--GVV--A-----DGILVGNKRLMEDF- 123 (287)
T ss_dssp HHHHHHHHHTTCCCCCC-------------------SCEEEE---T----TT--EEE--E-----TTEEEECHHHHHHT-
T ss_pred HHHHHHHHhcCCCcccc-------------------ccceee---c----CC--CeE--E-----EEEEECCHHHHHhc-
Confidence 99999999988753110 001100 0 00 000 0 11334554433221
Q ss_pred hccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeec
Q 002339 637 SKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVE 716 (934)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~ 716 (934)
+...+..+....+.+..+|.+++++++ |..++|.+...
T Consensus 124 ---~~~~~~~~~~~~~~~~~~g~~~i~~~~---------------------------------------d~~~~~~~~~~ 161 (287)
T 3a1c_A 124 ---GVAVSNEVELALEKLEREAKTAVIVAR---------------------------------------NGRVEGIIAVS 161 (287)
T ss_dssp ---TCCCCHHHHHHHHHHHHTTCEEEEEEE---------------------------------------TTEEEEEEEEE
T ss_pred ---CCCccHHHHHHHHHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEec
Confidence 111213455667788889999999985 45789999999
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
++++|++.++|+.|+++|++++++||+....+..+++.+|+..
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------------------- 204 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------------------------------------- 204 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------------------------------------
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce-------------------------------------
Confidence 9999999999999999999999999999999999999888742
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~m 876 (934)
+|..+.|..|...++.+.. . ..++||||+.||+.|
T Consensus 205 -------------------------------------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~ 239 (287)
T 3a1c_A 205 -------------------------------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPA 239 (287)
T ss_dssp -------------------------------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHH
T ss_pred -------------------------------------------eeeecChHHHHHHHHHHhc-C-CeEEEEECCHHHHHH
Confidence 3444568899999999987 5 889999999999999
Q ss_pred HHHcCccEEEcc-cchhhHHHhCcEee--cCccchhhhHhhhchhhhHHhh
Q 002339 877 IQEADIGIGISG-VEGMQAVMASDFSI--AQFRFLERLLVVHGHWCYKRIA 924 (934)
Q Consensus 877 l~~A~vGIam~~-~e~~~a~~~AD~ii--~~~~~l~~lll~~Gr~~~~~i~ 924 (934)
.+.|++||++.+ .+. .+..||+++ .++..+..+ +..+|.++++++
T Consensus 240 a~~ag~~v~~~~~~~~--~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 240 LAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp HHHSSEEEEECCCSCC--SSCCSSEEESSSCTHHHHHH-HHTTC-------
T ss_pred HHHCCeeEEeCCCCHH--HHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhhC
Confidence 999999999953 333 566899999 666667777 899999998874
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.3e-20 Score=199.56 Aligned_cols=142 Identities=25% Similarity=0.320 Sum_probs=113.3
Q ss_pred CceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHH
Q 002339 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKD 785 (934)
Q Consensus 706 dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 785 (934)
+..++|.+.+.++++|++.++|+.|++.|+++.|+||+....+..+++.+|+..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 185 (280)
T 3skx_A 132 NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD-------------------------- 185 (280)
T ss_dssp TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------
T ss_pred CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh--------------------------
Confidence 557899999999999999999999999999999999999999999999998742
Q ss_pred hHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEE
Q 002339 786 NILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTL 865 (934)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~ 865 (934)
.|..+.|.+|...++.+.+ .. .++
T Consensus 186 ------------------------------------------------------~f~~~~~~~k~~~~k~~~~-~~-~~~ 209 (280)
T 3skx_A 186 ------------------------------------------------------YFAEVLPHEKAEKVKEVQQ-KY-VTA 209 (280)
T ss_dssp ------------------------------------------------------EECSCCGGGHHHHHHHHHT-TS-CEE
T ss_pred ------------------------------------------------------HhHhcCHHHHHHHHHHHHh-cC-CEE
Confidence 4555778899999998886 33 679
Q ss_pred EEcCChhhHHHHHHcCccEEEcc-cchhhHHHhCcEee--cCccchhhhHhhhchhhhHHhhhheEEEec
Q 002339 866 AIGDGANDVGMIQEADIGIGISG-VEGMQAVMASDFSI--AQFRFLERLLVVHGHWCYKRIAQMVIIKDF 932 (934)
Q Consensus 866 aiGDG~ND~~ml~~A~vGIam~~-~e~~~a~~~AD~ii--~~~~~l~~lll~~Gr~~~~~i~~~i~~~~~ 932 (934)
||||+.||++|++.|++||+|++ .+. ++..||+++ .+...|..+ +..+|..++++++++.|.|-
T Consensus 210 ~vGD~~nDi~~~~~Ag~~va~~~~~~~--~~~~a~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 210 MVGDGVNDAPALAQADVGIAIGAGTDV--AVETADIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp EEECTTTTHHHHHHSSEEEECSCCSSS--CCCSSSEECSSCCTHHHHHH-HHHHHTCCC-----------
T ss_pred EEeCCchhHHHHHhCCceEEecCCcHH--HHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999964 444 788999998 445557777 78999999999999998764
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-21 Score=176.36 Aligned_cols=100 Identities=23% Similarity=0.258 Sum_probs=90.9
Q ss_pred hhhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecccccC
Q 002339 130 QDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATS 209 (934)
Q Consensus 130 ~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~ 209 (934)
+...+...+++|+ |+|+++.+++++|+|||+|.|++||.|||||+|++ |.++||||+|||||.|+.|.+++..
T Consensus 5 ~L~~l~p~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~-----g~~~vdeS~LTGEs~pv~k~~g~~v- 77 (113)
T 2hc8_A 5 KLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-----GESYVDESMISGEPVPVLKSKGDEV- 77 (113)
T ss_dssp HHHHHSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----CCEEEECHHHHCCSSCEEECTTCEE-
T ss_pred HHhcCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ceEEEEccccCCCCccEEECCCCEE-
Confidence 3455667899999 89999999999999999999999999999999999 7799999999999999999987655
Q ss_pred CCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhhc
Q 002339 210 PLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQN 283 (934)
Q Consensus 210 ~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~ 283 (934)
|+||++.+|. +.++|++||.+|.+++.
T Consensus 78 --------------------------~aGt~~~~G~---------------------~~~~V~~~g~~T~~~~i 104 (113)
T 2hc8_A 78 --------------------------FGATINNTGV---------------------LKIRATRVGGETLLAQI 104 (113)
T ss_dssp --------------------------CTTCEECSSC---------------------EEEEEEECGGGSHHHHH
T ss_pred --------------------------EeCCEEeece---------------------EEEEEEEecCcCHHHHH
Confidence 8999999888 99999999999977654
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.1e-20 Score=167.61 Aligned_cols=99 Identities=21% Similarity=0.224 Sum_probs=87.3
Q ss_pred hhhhccceEEEEeCCCe------EEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeec
Q 002339 131 DKEVNARKVSVHVGNGV------FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRA 204 (934)
Q Consensus 131 ~~~~n~~~~~V~~r~g~------~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~ 204 (934)
...+...+++|+ |+|. ++.|++++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.+
T Consensus 12 L~~l~p~~a~v~-r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~-----g~~~vdeS~LTGEs~pv~k~~ 85 (124)
T 2kij_A 12 LISLQATEATIV-TLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIE-----GHSMVDESLITGEAMPVAKKP 85 (124)
T ss_dssp HHHTCCSEEEEE-ECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECS-----CCCEEECTTTTCCSSCEECCT
T ss_pred HhccCCCEEEEE-ECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEE-----ccEEEEeccccCCCccEEeCC
Confidence 345567899999 6543 7899999999999999999999999999999 678999999999999999998
Q ss_pred ccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhhc
Q 002339 205 MEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQN 283 (934)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~ 283 (934)
++.. |+||++.+|. +.+.|++||.+|.+++.
T Consensus 86 g~~v---------------------------~aGt~~~~G~---------------------~~~~v~~~g~~T~~~~I 116 (124)
T 2kij_A 86 GSTV---------------------------IAGSINQNGS---------------------LLICATHVGADTTLSQI 116 (124)
T ss_dssp TEEE---------------------------CTTCEEESSC---------------------CEEEECSCTTTCHHHHH
T ss_pred CCEE---------------------------EcCCEEeeeE---------------------EEEEEEEecccCHHHHH
Confidence 7655 8999999888 99999999999977554
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.7e-18 Score=169.25 Aligned_cols=140 Identities=24% Similarity=0.273 Sum_probs=107.1
Q ss_pred HHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCC
Q 002339 525 LFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFT 604 (934)
Q Consensus 525 ~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~ 604 (934)
+.+...++|+..... .++|.|.||++++...+..- ....|+++..+||+
T Consensus 17 ~vl~~a~L~s~~~~~-----------~~n~~d~Ail~~~~~~~~~~--------------------~~~~~~~~~eiPFd 65 (170)
T 3gwi_A 17 RVLHSAWLNSHYQTG-----------LKNLLDTAVLEGTDEESARS--------------------LASRWQKIDEIPFD 65 (170)
T ss_dssp HHHHHHHHHHHHCCS-----------CCCHHHHHHHHTSCHHHHHH--------------------HHHHSEEEEEECCC
T ss_pred HHHHHHHHcCCCCCC-----------CCChHHHHHHHHHHhcChhh--------------------hhhcCeEEeeEecC
Confidence 455666666543211 36999999999875422100 13568899999999
Q ss_pred CCCceEEEEEEcCCCcEEEEEcccchhhhHhhhcc---------ccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHH
Q 002339 605 SKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYS 675 (934)
Q Consensus 605 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~ 675 (934)
|.|||||++++.+++.+++|+|||||.|+++|+.. +.+.++.+.+.++.|+.+|+|||++|||.++..+..
T Consensus 66 s~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~ 145 (170)
T 3gwi_A 66 FERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD 145 (170)
T ss_dssp TTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC
T ss_pred cccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc
Confidence 99999999999888889999999999999999851 233567889999999999999999999998753200
Q ss_pred HHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeeccc
Q 002339 676 AWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDK 718 (934)
Q Consensus 676 ~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~ 718 (934)
.....|+||+|+|++||-|.
T Consensus 146 -----------------------~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 146 -----------------------YQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp -----------------------CCGGGSCSEEEEEEEEEEC-
T ss_pred -----------------------cCccccCCcEEEehhccccc
Confidence 01235899999999999875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.9e-14 Score=155.97 Aligned_cols=139 Identities=12% Similarity=0.103 Sum_probs=101.9
Q ss_pred ecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHH
Q 002339 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNA 794 (934)
Q Consensus 715 i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (934)
..+++||+++++++.|+++|+++.|+||+...++.++++++|+...+..++..... .+
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~-~~--------------------- 195 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMD-FD--------------------- 195 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEE-EC---------------------
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEE-Ec---------------------
Confidence 35799999999999999999999999999999999999999997665444321110 00
Q ss_pred HhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhH
Q 002339 795 SQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDV 874 (934)
Q Consensus 795 ~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~ 874 (934)
.......+.++.. ..+++..|.+|...+..++. .++.|+|+|||.||+
T Consensus 196 ----------~~~~~~~~~~~~i---------------------~~~~k~~~~~k~~~~~~~~~-~~~~v~~vGDGiNDa 243 (297)
T 4fe3_A 196 ----------ENGVLKGFKGELI---------------------HVFNKHDGALKNTDYFSQLK-DNSNIILLGDSQGDL 243 (297)
T ss_dssp ----------TTSBEEEECSSCC---------------------CTTCHHHHHHTCHHHHHHTT-TCCEEEEEESSGGGG
T ss_pred ----------ccceeEecccccc---------------------chhhcccHHHHHHHHHHhhc-cCCEEEEEeCcHHHH
Confidence 0000111112111 13455678888888888876 788999999999999
Q ss_pred HHH---HHcCccEEEc--ccc----hhhHHHhCcEeecCccc
Q 002339 875 GMI---QEADIGIGIS--GVE----GMQAVMASDFSIAQFRF 907 (934)
Q Consensus 875 ~ml---~~A~vGIam~--~~e----~~~a~~~AD~ii~~~~~ 907 (934)
+|+ ..||+||+|+ +.+ ...++++||+||.++++
T Consensus 244 ~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~ 285 (297)
T 4fe3_A 244 RMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEES 285 (297)
T ss_dssp GTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCB
T ss_pred HHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCC
Confidence 995 4999999986 221 12279999999999877
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.15 E-value=4.8e-11 Score=127.77 Aligned_cols=201 Identities=18% Similarity=0.257 Sum_probs=106.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEc----------------CCCchhHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT----------------ALNSDSVGKAAKE 781 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~----------------~~~~~~~~~~~~~ 781 (934)
.+-+.+.++|++++++|++++++|||+...+..+...+|+.......+..+ ..+.+.....+..
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~~ 101 (279)
T 4dw8_A 22 EISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYEC 101 (279)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHHH
Confidence 577899999999999999999999999999999999998742222333222 2222222222222
Q ss_pred HHHHhHH------------------HHHHHHHhhhh--------ccCCCCCcEEEEEcChhhhHhhhHHHHHHHHh-hhh
Q 002339 782 AVKDNIL------------------MQITNASQMIK--------LERDPHAAYALIIEGKTLAYALEDDMKHHFLG-LAV 834 (934)
Q Consensus 782 ~~~~~~~------------------~~~~~~~~~~~--------~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~-~~~ 834 (934)
.....+. ........... ..........++.........+.+.+...+.. +..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (279)
T 4dw8_A 102 ARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINV 181 (279)
T ss_dssp HHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTCEE
T ss_pred HHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCEEE
Confidence 1111000 00000000000 00000111122222221111111122222211 110
Q ss_pred ccCceEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccc--
Q 002339 835 ECASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF-- 907 (934)
Q Consensus 835 ~~~~~i~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~-- 907 (934)
......+....|. .|+..++.+.+..| ..+++|||+.||++|++.|++||+|++.... ++.+||+++.+...
T Consensus 182 ~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~~~e~G 260 (279)
T 4dw8_A 182 FRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEP-VKKAADYITLTNDEDG 260 (279)
T ss_dssp EEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCSEECCCGGGTH
T ss_pred EEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHH-HHHhCCEEcCCCCCcH
Confidence 0011123355565 78888887766433 5799999999999999999999999654432 89999999976433
Q ss_pred ----hhhhHhhhchhh
Q 002339 908 ----LERLLVVHGHWC 919 (934)
Q Consensus 908 ----l~~lll~~Gr~~ 919 (934)
|.+++..+|+..
T Consensus 261 v~~~i~~~~~~~~~~~ 276 (279)
T 4dw8_A 261 VAEAIERIFNVEGHHH 276 (279)
T ss_dssp HHHHHHHHC-------
T ss_pred HHHHHHHHHhcccccc
Confidence 666667777654
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.13 E-value=5.7e-11 Score=119.14 Aligned_cols=132 Identities=11% Similarity=0.093 Sum_probs=101.7
Q ss_pred EEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHH
Q 002339 709 LVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNIL 788 (934)
Q Consensus 709 ~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 788 (934)
.++.+.++|.+ +|+.|+++|+++.|+||+....+..+++.+|+..
T Consensus 43 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~----------------------------- 87 (189)
T 3mn1_A 43 EIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH----------------------------- 87 (189)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE-----------------------------
T ss_pred EeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH-----------------------------
Confidence 44445554443 9999999999999999999999999999999843
Q ss_pred HHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcC---CCEEE
Q 002339 789 MQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT---GKTTL 865 (934)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~---~~~v~ 865 (934)
++.. +..|...++.+.+.. ...++
T Consensus 88 ---------------------------------------------------~f~~--~~~K~~~~~~~~~~~g~~~~~~~ 114 (189)
T 3mn1_A 88 ---------------------------------------------------LFQG--REDKLVVLDKLLAELQLGYEQVA 114 (189)
T ss_dssp ---------------------------------------------------EECS--CSCHHHHHHHHHHHHTCCGGGEE
T ss_pred ---------------------------------------------------HhcC--cCChHHHHHHHHHHcCCChhHEE
Confidence 1111 156666666555432 46899
Q ss_pred EEcCChhhHHHHHHcCccEEEcc-cchhhHHHhCcEeecCc------cchhhhHhhhchhhhHHhhhheEEEe
Q 002339 866 AIGDGANDVGMIQEADIGIGISG-VEGMQAVMASDFSIAQF------RFLERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 866 aiGDG~ND~~ml~~A~vGIam~~-~e~~~a~~~AD~ii~~~------~~l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
+|||+.||++|++.|++|+++.+ .+. ++..||+++.+. +.+.++ +...|..+.++++.+.|.+
T Consensus 115 ~vGD~~nDi~~~~~ag~~~~~~~~~~~--~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~ 184 (189)
T 3mn1_A 115 YLGDDLPDLPVIRRVGLGMAVANAASF--VREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGH 184 (189)
T ss_dssp EEECSGGGHHHHHHSSEEEECTTSCHH--HHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC
T ss_pred EECCCHHHHHHHHHCCCeEEeCCccHH--HHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhccc
Confidence 99999999999999999999954 443 888999999873 446666 5667889999999988765
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.10 E-value=7e-11 Score=126.51 Aligned_cols=200 Identities=15% Similarity=0.161 Sum_probs=98.7
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCC---------------CchhHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL---------------NSDSVGKAAKEA 782 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~---------------~~~~~~~~~~~~ 782 (934)
.+-+.+.++|++++++|++++++|||....+..+...+|+..+....++.+|. +.+.....+...
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~~ 101 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAWA 101 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999875433333333332 222222222211
Q ss_pred HHHh-------------------HHHHHHHHHhhhhc------cC--CCCCcEEEEEcChhhhHhhhHHHHHHHHh-hhh
Q 002339 783 VKDN-------------------ILMQITNASQMIKL------ER--DPHAAYALIIEGKTLAYALEDDMKHHFLG-LAV 834 (934)
Q Consensus 783 ~~~~-------------------~~~~~~~~~~~~~~------~~--~~~~~~~lvi~g~~l~~~~~~~~~~~~~~-~~~ 834 (934)
.... .............. .. .......++.........+.+.+...+.. +..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (279)
T 3mpo_A 102 RKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFSV 181 (279)
T ss_dssp HHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEEE
T ss_pred HHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEEE
Confidence 1110 00000000000000 00 01111112222111111111111111211 111
Q ss_pred ccCceEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcc-cchhhHHHhCcEeecCccc-
Q 002339 835 ECASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISG-VEGMQAVMASDFSIAQFRF- 907 (934)
Q Consensus 835 ~~~~~i~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~-~e~~~a~~~AD~ii~~~~~- 907 (934)
......+....|. .|+..++.+.+..| ..+++|||+.||++|++.|++||+|++ .+. ++.+||++..+...
T Consensus 182 ~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~--~k~~A~~v~~~~~e~ 259 (279)
T 3mpo_A 182 VQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDE--VKEAAQAVTLTNAEN 259 (279)
T ss_dssp ECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCH--HHHHCSCBC------
T ss_pred EEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHH--HHHhcceeccCCCcc
Confidence 1112234455554 59988888776544 579999999999999999999999964 454 89999999876332
Q ss_pred -----hhhhHhhhchhh
Q 002339 908 -----LERLLVVHGHWC 919 (934)
Q Consensus 908 -----l~~lll~~Gr~~ 919 (934)
|.++++-+|+..
T Consensus 260 Gv~~~i~~~~~~~~~~~ 276 (279)
T 3mpo_A 260 GVAAAIRKYALNEGHHH 276 (279)
T ss_dssp CHHHHHC----------
T ss_pred HHHHHHHHHhcccCccc
Confidence 566666666643
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.09 E-value=1e-10 Score=126.05 Aligned_cols=82 Identities=17% Similarity=0.219 Sum_probs=58.0
Q ss_pred EcCh--hhHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccc------hhhh
Q 002339 843 RVSP--KQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF------LERL 911 (934)
Q Consensus 843 r~~p--~qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~------l~~l 911 (934)
.+.| ..|+..++.+.+..| ..|++|||+.||++|++.|++||+|++.... ++..||+++.+... |.++
T Consensus 195 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~s~~edGv~~~i~~~ 273 (290)
T 3dnp_A 195 NIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPE-IKRKADWVTRSNDEQGVAYMMKEY 273 (290)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHSSEECCCTTTTHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHH-HHHhcCEECCCCCccHHHHHHHHH
Confidence 3444 469888888776544 5799999999999999999999999655433 89999999976433 6666
Q ss_pred HhhhchhhhHHhhh
Q 002339 912 LVVHGHWCYKRIAQ 925 (934)
Q Consensus 912 ll~~Gr~~~~~i~~ 925 (934)
+...+++-|.+-..
T Consensus 274 ~~~~~~~~~~~~~~ 287 (290)
T 3dnp_A 274 FRMQQRKGFLDKFH 287 (290)
T ss_dssp HHHHHHC-------
T ss_pred HHhcCcccHHhHhc
Confidence 66667766655443
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.1e-09 Score=115.15 Aligned_cols=186 Identities=13% Similarity=0.144 Sum_probs=103.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc----CCc-------eEEEEcCCCchhHHHHHHHHHHH-
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR----QGM-------KQICITALNSDSVGKAAKEAVKD- 785 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~----~~~-------~~i~~~~~~~~~~~~~~~~~~~~- 785 (934)
.+-+.+.++|++|+++|++++++|||....+..+...+++.. .++ +.+.....+.+.....+....+.
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 577999999999999999999999999999999888876521 111 12222222222222222221111
Q ss_pred --------------------hHHHHHHHHHhh-------hhccC-CCCCcEEEEE-cChhhhHhhhHHHHHHHHh-hhhc
Q 002339 786 --------------------NILMQITNASQM-------IKLER-DPHAAYALII-EGKTLAYALEDDMKHHFLG-LAVE 835 (934)
Q Consensus 786 --------------------~~~~~~~~~~~~-------~~~~~-~~~~~~~lvi-~g~~l~~~~~~~~~~~~~~-~~~~ 835 (934)
.....+...... ...-. ....+ ..+. +....... .+.+.+.+.. +...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~k-i~i~~~~~~~~~~-~~~l~~~~~~~~~~~ 196 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIK-FTVFHPDKCEELC-TPVFIPAWNKKAHLA 196 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCE-EEEECSSCHHHHH-TTTHHHHHTTTEEEE
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceE-EEEEcChHHHHHH-HHHHHHHhcCCEEEE
Confidence 011111000000 00000 11112 2223 22222221 1223333321 1111
Q ss_pred cCceEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 836 CASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 836 ~~~~i~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
.....+.++.|. .|+..++.+.+..| ..|++|||+.||++|++.|++||||++.... ++..||++..+..
T Consensus 197 ~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~-~k~~A~~v~~s~~ 271 (283)
T 3dao_A 197 AAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQE-VIAAAKHTCAPYW 271 (283)
T ss_dssp EETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHH-HHHHSSEEECCGG
T ss_pred EecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHH-HHHhcCeECCCCC
Confidence 111123445554 59988888876554 5799999999999999999999999654433 8999999997643
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.99 E-value=8.8e-10 Score=113.89 Aligned_cols=174 Identities=13% Similarity=0.067 Sum_probs=98.4
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCc-----hh--HHHHHHHHHHHhHH
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNS-----DS--VGKAAKEAVKDNIL 788 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~-----~~--~~~~~~~~~~~~~~ 788 (934)
..++.+++.++|++|+++|++++++|||....+..+++.+|+.. ..++.+|.-. +. ....+ . ....+
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~~i~~~~~l-~-~~~~i- 93 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNE-G-TNKFL- 93 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSH-H-HHHHH-
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC---eEEEeCCcEEEeCCCCEEEEeccH-H-HHHHH-
Confidence 44678899999999999999999999999999999999998742 2332222210 00 00000 0 00111
Q ss_pred HHHHHHHhhhhccCC-----CCCcEEEEEcChhhhHhhhHHHHHHHHhhhhcc---CceEEEEcCh--hhHHHHHHHHhh
Q 002339 789 MQITNASQMIKLERD-----PHAAYALIIEGKTLAYALEDDMKHHFLGLAVEC---ASVICCRVSP--KQKALVTRLVKE 858 (934)
Q Consensus 789 ~~~~~~~~~~~~~~~-----~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~---~~~i~~r~~p--~qK~~iv~~lk~ 858 (934)
..+.. .+..... ....... + +. ...++....+.... .. ....+.++.| ..|+..++.+.+
T Consensus 94 ~~~~~---~~~~~~~~~~~~~~~~~~~-~----~~-~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~ 163 (227)
T 1l6r_A 94 EEMSK---RTSMRSILTNRWREASTGF-D----ID-PEDVDYVRKEAESR-GFVIFYSGYSWHLMNRGEDKAFAVNKLKE 163 (227)
T ss_dssp HHHTT---TSSCBCCGGGGGCSSSEEE-B----CC-GGGHHHHHHHHHTT-TEEEEEETTEEEEEETTCSHHHHHHHHHH
T ss_pred HHHHH---HhcCCccccccceecccce-E----Ee-cCCHHHHHHHHHhc-CEEEEecCcEEEEecCCCCHHHHHHHHHH
Confidence 11110 0000000 0000000 0 00 01111111111111 10 0111234556 579988888876
Q ss_pred cCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 859 GTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 859 ~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
..+ ..+++|||+.||++|++.|++||+|++.... ++..||+++.+..
T Consensus 164 ~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~~-~k~~a~~v~~~~~ 213 (227)
T 1l6r_A 164 MYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDN-IKAVSDFVSDYSY 213 (227)
T ss_dssp HTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHH-HHHHCSEECSCCT
T ss_pred HhCcCHHHEEEECCcHHhHHHHHHcCceEEecCchHH-HHHhCCEEecCCC
Confidence 433 5799999999999999999999999644332 8889999987644
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-09 Score=108.65 Aligned_cols=127 Identities=12% Similarity=0.044 Sum_probs=91.9
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhh
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMI 798 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (934)
+.+++.++|+.|+++|++++++||++...+..+++.+|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 44567799999999999999999999999999999998842
Q ss_pred hccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCC---CEEEEEcCChhhHH
Q 002339 799 KLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG---KTTLAIGDGANDVG 875 (934)
Q Consensus 799 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ 875 (934)
++. ....|...++.+.+..+ ..+++|||+.||++
T Consensus 77 -----------------------------------------~~~--~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 113 (180)
T 1k1e_A 77 -----------------------------------------FFL--GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLP 113 (180)
T ss_dssp -----------------------------------------EEE--SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred -----------------------------------------eec--CCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 111 01345555554443223 67999999999999
Q ss_pred HHHHcCccEEEcc-cchhhHHHhCcEeecCccc------hhhhHhhhchhhhHHhhhheEEE
Q 002339 876 MIQEADIGIGISG-VEGMQAVMASDFSIAQFRF------LERLLVVHGHWCYKRIAQMVIIK 930 (934)
Q Consensus 876 ml~~A~vGIam~~-~e~~~a~~~AD~ii~~~~~------l~~lll~~Gr~~~~~i~~~i~~~ 930 (934)
|++.|++++++.+ .+. ++..||+++.+... +.+. +...|..|.++...+.|.
T Consensus 114 ~~~~ag~~~~~~~~~~~--~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~ 172 (180)
T 1k1e_A 114 AFAACGTSFAVADAPIY--VKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFL 172 (180)
T ss_dssp HHHHSSEEEECTTSCHH--HHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHH
T ss_pred HHHHcCCeEEeCCccHH--HHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchh
Confidence 9999999999954 443 78899999987532 2233 333455577776655443
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.90 E-value=5.2e-09 Score=113.42 Aligned_cols=65 Identities=15% Similarity=0.211 Sum_probs=51.2
Q ss_pred EEcCh--hhHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccc
Q 002339 842 CRVSP--KQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF 907 (934)
Q Consensus 842 ~r~~p--~qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~ 907 (934)
.+..| ..|+..++.+.+..| ..+++|||+.||++|++.|++||+|++.... ++.+||+++.+...
T Consensus 220 ~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~~~~e 289 (304)
T 3l7y_A 220 IDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKN-VKAAANYQAKSNDE 289 (304)
T ss_dssp EEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHH-HHHHCSEECCCGGG
T ss_pred EEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHH-HHHhccEEcCCCCc
Confidence 34444 469988888876544 5799999999999999999999999654433 89999999886433
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.7e-08 Score=108.24 Aligned_cols=63 Identities=24% Similarity=0.256 Sum_probs=49.1
Q ss_pred EEEcCh--hhHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcE--eecC
Q 002339 841 CCRVSP--KQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDF--SIAQ 904 (934)
Q Consensus 841 ~~r~~p--~qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~--ii~~ 904 (934)
+.++.| ..|+..++.+.+..| ..+++|||+.||++|++.|++||||++.... +|++||+ ++.+
T Consensus 200 ~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~-vk~~A~~~~v~~s 269 (285)
T 3pgv_A 200 CLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQR-LKDLHPELEVIGS 269 (285)
T ss_dssp EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCTTSEECCC
T ss_pred eEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHH-HHHhCCCCEeccc
Confidence 345555 469988888876544 5799999999999999999999999655433 8999985 5444
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.87 E-value=2.8e-09 Score=103.98 Aligned_cols=106 Identities=14% Similarity=0.097 Sum_probs=80.7
Q ss_pred CceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHH--HcCcccCCceEEEEcCCCchhHHHHHHHHH
Q 002339 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF--ACSLLRQGMKQICITALNSDSVGKAAKEAV 783 (934)
Q Consensus 706 dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~--~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~ 783 (934)
+...++.+.++|. .+|+.|+++|+++.|+||+ ..+..+++ .+|+.
T Consensus 30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 3455666677776 3899999999999999999 67777887 44541
Q ss_pred HHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcC---
Q 002339 784 KDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT--- 860 (934)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~--- 860 (934)
++ ..+++|...++.+.+..
T Consensus 77 --------------------------------------------------------~~--~g~~~K~~~l~~~~~~~gi~ 98 (168)
T 3ewi_A 77 --------------------------------------------------------TE--VSVSDKLATVDEWRKEMGLC 98 (168)
T ss_dssp --------------------------------------------------------EE--CSCSCHHHHHHHHHHHTTCC
T ss_pred --------------------------------------------------------EE--ECCCChHHHHHHHHHHcCcC
Confidence 00 12346777676665533
Q ss_pred CCEEEEEcCChhhHHHHHHcCccEEEcc-cchhhHHHhCcEeecC
Q 002339 861 GKTTLAIGDGANDVGMIQEADIGIGISG-VEGMQAVMASDFSIAQ 904 (934)
Q Consensus 861 ~~~v~aiGDG~ND~~ml~~A~vGIam~~-~e~~~a~~~AD~ii~~ 904 (934)
...+++|||+.||++|++.|+++++|.+ .+. +++.||+++.+
T Consensus 99 ~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~--~k~~Ad~v~~~ 141 (168)
T 3ewi_A 99 WKEVAYLGNEVSDEECLKRVGLSAVPADACSG--AQKAVGYICKC 141 (168)
T ss_dssp GGGEEEECCSGGGHHHHHHSSEEEECTTCCHH--HHTTCSEECSS
T ss_pred hHHEEEEeCCHhHHHHHHHCCCEEEeCChhHH--HHHhCCEEeCC
Confidence 3689999999999999999999999954 444 89999999986
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.86 E-value=4.6e-09 Score=115.49 Aligned_cols=143 Identities=18% Similarity=0.198 Sum_probs=94.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.++++.|+++|+++.|+||+....+..++..+|+...-...+.+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~------------------------------ 227 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEI------------------------------ 227 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEE------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEe------------------------------
Confidence 68899999999999999999999999999999999999985321111111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE-----cChhhHHHHHHHHhhc---CCCEEEEEcC
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-----VSPKQKALVTRLVKEG---TGKTTLAIGD 869 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-----~~p~qK~~iv~~lk~~---~~~~v~aiGD 869 (934)
.+|. +..+ ..++.|...++.+.+. ....++||||
T Consensus 228 --------------~d~~------------------------~tg~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGD 269 (335)
T 3n28_A 228 --------------VSGK------------------------LTGQVLGEVVSAQTKADILLTLAQQYDVEIHNTVAVGD 269 (335)
T ss_dssp --------------ETTE------------------------EEEEEESCCCCHHHHHHHHHHHHHHHTCCGGGEEEEEC
T ss_pred --------------eCCe------------------------eeeeecccccChhhhHHHHHHHHHHcCCChhhEEEEeC
Confidence 0110 1111 1234555555544432 3468999999
Q ss_pred ChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 870 GANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 870 G~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
|.||++|++.||+|++|++.+. +++.||+++...+. +..+ +......-.|++.++.|.|
T Consensus 270 s~nDi~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~~~ 330 (335)
T 3n28_A 270 GANDLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKEGH 330 (335)
T ss_dssp SGGGHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC-----
T ss_pred CHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhcccccccc
Confidence 9999999999999999966665 88999999854333 3333 2333333345666665544
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.85 E-value=1.9e-09 Score=108.17 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=76.6
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCC
Q 002339 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (934)
Q Consensus 725 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (934)
.+|+.|+++|++++|+||+....+..+++.+|+..
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--------------------------------------------- 93 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL--------------------------------------------- 93 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------------------------
Confidence 34999999999999999999999999999999842
Q ss_pred CCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCChhhHHHHHHcC
Q 002339 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEAD 881 (934)
Q Consensus 805 ~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~---~~~~v~aiGDG~ND~~ml~~A~ 881 (934)
++... +.|...++.+.+. ....+++|||+.||++|++.|+
T Consensus 94 -----------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag 136 (195)
T 3n07_A 94 -----------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVA 136 (195)
T ss_dssp -----------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSS
T ss_pred -----------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCC
Confidence 11111 4455555554432 3467999999999999999999
Q ss_pred ccEEEcccchhhHHHhCcEeecCc
Q 002339 882 IGIGISGVEGMQAVMASDFSIAQF 905 (934)
Q Consensus 882 vGIam~~~e~~~a~~~AD~ii~~~ 905 (934)
++++|.+.... ++..||+++.+.
T Consensus 137 ~~va~~na~~~-~~~~ad~v~~~~ 159 (195)
T 3n07_A 137 LRVCVADGHPL-LAQRANYVTHIK 159 (195)
T ss_dssp EEEECTTSCHH-HHHHCSEECSSC
T ss_pred CEEEECChHHH-HHHhCCEEEcCC
Confidence 99999644332 889999999863
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.82 E-value=7.4e-09 Score=102.32 Aligned_cols=104 Identities=13% Similarity=0.128 Sum_probs=80.6
Q ss_pred HHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCC
Q 002339 726 CIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPH 805 (934)
Q Consensus 726 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (934)
+|+.|+++|+++.++||+....+..+++.+|+. .
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-----~----------------------------------------- 80 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-----V----------------------------------------- 80 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----E-----------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----e-----------------------------------------
Confidence 999999999999999999999999999999873 1
Q ss_pred CcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcC---CCEEEEEcCChhhHHHHHHcCc
Q 002339 806 AAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADI 882 (934)
Q Consensus 806 ~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~---~~~v~aiGDG~ND~~ml~~A~v 882 (934)
+.. .+.|...++.+.+.. ...+++|||+.||++|++.|++
T Consensus 81 -----------------------------------~~~--~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~ 123 (176)
T 3mmz_A 81 -----------------------------------LHG--IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGW 123 (176)
T ss_dssp -----------------------------------EES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred -----------------------------------EeC--CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCC
Confidence 100 145665555554432 3679999999999999999999
Q ss_pred cEEEcc-cchhhHHHhCcEeecC------ccchhhhHhh
Q 002339 883 GIGISG-VEGMQAVMASDFSIAQ------FRFLERLLVV 914 (934)
Q Consensus 883 GIam~~-~e~~~a~~~AD~ii~~------~~~l~~lll~ 914 (934)
|+++.+ .+. ++..||+++.+ .+.+.++|+.
T Consensus 124 ~v~~~~~~~~--~~~~ad~v~~~~~~~g~~~~l~~~l~~ 160 (176)
T 3mmz_A 124 PVAVASAHDV--VRGAARAVTTVPGGDGAIREIASWILG 160 (176)
T ss_dssp EEECTTCCHH--HHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred eEECCChhHH--HHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 999954 444 78899999987 3446565443
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.82 E-value=4.9e-09 Score=110.67 Aligned_cols=58 Identities=26% Similarity=0.377 Sum_probs=46.8
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 848 QKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 848 qK~~iv~~lk~~~---~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
.|+..++.+.+.. ...+++|||+.||++|++.|++||+|++... .++..||+++.+..
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~-~~k~~A~~v~~~~~ 243 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHE-EVKRVADFVTKPVD 243 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCH-HHHHTCSEEECCGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcH-HHHHhCCEEeCCCC
Confidence 6888888776543 3579999999999999999999999964433 28999999987643
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.81 E-value=7.6e-09 Score=110.10 Aligned_cols=59 Identities=22% Similarity=0.268 Sum_probs=47.7
Q ss_pred hhHHHHHHHHhhcC---CCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 847 KQKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 847 ~qK~~iv~~lk~~~---~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
..|+..++.+.+.. ...+++|||+.||++|++.|++||+|++.... ++..||+++.+..
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~~~ 260 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQ-LKDIATSICEDIF 260 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHH-HHHHCSEEECCGG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHH-HHHhhhheeCCCc
Confidence 35887777776543 36799999999999999999999999655433 8999999998644
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.81 E-value=4.7e-09 Score=106.69 Aligned_cols=107 Identities=11% Similarity=0.110 Sum_probs=83.0
Q ss_pred EEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHH
Q 002339 709 LVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNIL 788 (934)
Q Consensus 709 ~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 788 (934)
.+....+.|.+ +|+.|+++|+++.|+||+....+..+++.+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34444455444 9999999999999999999999999999999842
Q ss_pred HHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc---CCCEEE
Q 002339 789 MQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTL 865 (934)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~---~~~~v~ 865 (934)
++... +.|...++.+.+. ....++
T Consensus 118 ---------------------------------------------------~f~~~--k~K~~~l~~~~~~lg~~~~~~~ 144 (211)
T 3ij5_A 118 ---------------------------------------------------LYQGQ--SDKLVAYHELLATLQCQPEQVA 144 (211)
T ss_dssp ---------------------------------------------------EECSC--SSHHHHHHHHHHHHTCCGGGEE
T ss_pred ---------------------------------------------------hhccc--CChHHHHHHHHHHcCcCcceEE
Confidence 11112 4566666665543 346899
Q ss_pred EEcCChhhHHHHHHcCccEEEcc-cchhhHHHhCcEeecCc
Q 002339 866 AIGDGANDVGMIQEADIGIGISG-VEGMQAVMASDFSIAQF 905 (934)
Q Consensus 866 aiGDG~ND~~ml~~A~vGIam~~-~e~~~a~~~AD~ii~~~ 905 (934)
+|||+.||++|++.|++++++.+ .+. ++..||+++.+.
T Consensus 145 ~vGDs~nDi~~~~~ag~~~a~~~~~~~--~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 145 YIGDDLIDWPVMAQVGLSVAVADAHPL--LLPKAHYVTRIK 183 (211)
T ss_dssp EEECSGGGHHHHTTSSEEEECTTSCTT--TGGGSSEECSSC
T ss_pred EEcCCHHHHHHHHHCCCEEEeCCccHH--HHhhCCEEEeCC
Confidence 99999999999999999999954 444 788999999874
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.79 E-value=7e-09 Score=111.03 Aligned_cols=64 Identities=20% Similarity=0.291 Sum_probs=50.1
Q ss_pred EEcChh--hHHHHHHHHhhcC---CCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 842 CRVSPK--QKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 842 ~r~~p~--qK~~iv~~lk~~~---~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
.++.|. .|+..++.+.+.. ...+++|||+.||++|++.|++||+|++... .++..||+++.+..
T Consensus 190 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~-~~~~~a~~v~~~~~ 258 (282)
T 1rkq_A 190 LEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIP-SVKEVANFVTKSNL 258 (282)
T ss_dssp EEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCCTT
T ss_pred EEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcH-HHHhhCCEEecCCC
Confidence 455565 7998888876543 3579999999999999999999999965433 27889999987643
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.77 E-value=4.9e-09 Score=105.07 Aligned_cols=117 Identities=14% Similarity=0.124 Sum_probs=84.5
Q ss_pred HHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCC
Q 002339 727 IDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHA 806 (934)
Q Consensus 727 I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 (934)
|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999999853
Q ss_pred cEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEc--ChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccE
Q 002339 807 AYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRV--SPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGI 884 (934)
Q Consensus 807 ~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~--~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGI 884 (934)
++... .|.-...+++.+.- ....+++|||+.||++|++.|++++
T Consensus 88 ---------------------------------~~~~~kpk~~~~~~~~~~~~~-~~~~~~~vGD~~~Di~~~~~ag~~~ 133 (191)
T 3n1u_A 88 ---------------------------------YYKGQVDKRSAYQHLKKTLGL-NDDEFAYIGDDLPDLPLIQQVGLGV 133 (191)
T ss_dssp ---------------------------------EECSCSSCHHHHHHHHHHHTC-CGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred ---------------------------------ceeCCCChHHHHHHHHHHhCC-CHHHEEEECCCHHHHHHHHHCCCEE
Confidence 11111 22233344444443 4568999999999999999999999
Q ss_pred EEcccchhhHHHhCcEeecCcc------chhhhHhhhchhhhHHhhhh
Q 002339 885 GISGVEGMQAVMASDFSIAQFR------FLERLLVVHGHWCYKRIAQM 926 (934)
Q Consensus 885 am~~~e~~~a~~~AD~ii~~~~------~l~~lll~~Gr~~~~~i~~~ 926 (934)
++.+... .++..||+++.+.. .+..+ +...|..|..+...
T Consensus 134 ~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~~~~ 179 (191)
T 3n1u_A 134 AVSNAVP-QVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAELAITG 179 (191)
T ss_dssp ECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHH
T ss_pred EeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHHHHH
Confidence 9954432 28889999998733 35555 44555566555443
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.76 E-value=1.2e-08 Score=106.21 Aligned_cols=176 Identities=10% Similarity=0.023 Sum_probs=93.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc-CcccCCceEEEEcCCCch----hHHHHHHHHHHHhHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC-SLLRQGMKQICITALNSD----SVGKAAKEAVKDNILMQIT 792 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~-gi~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 792 (934)
.+.+.+.++|++|+++| +++++|||+...+..+...+ .++..++..+..++.... .....+.......+...+.
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 101 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVS 101 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHHh
Confidence 46788999999999999 99999999999988887654 222223323322211100 0111111111111111111
Q ss_pred HHHhhhhccCCCCCcEEEEEcC-hhhhHhhhHHHHHHHHh---hhhccCceEEEEcChh--hHHHHHHHHhhcCCCEEEE
Q 002339 793 NASQMIKLERDPHAAYALIIEG-KTLAYALEDDMKHHFLG---LAVECASVICCRVSPK--QKALVTRLVKEGTGKTTLA 866 (934)
Q Consensus 793 ~~~~~~~~~~~~~~~~~lvi~g-~~l~~~~~~~~~~~~~~---~~~~~~~~i~~r~~p~--qK~~iv~~lk~~~~~~v~a 866 (934)
......... ....+...... ..+..-..+.+...+.. +.. .....+.++.|. .|+..++.+.+..+ |++
T Consensus 102 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~lei~~~~~~Kg~al~~l~~~~g--via 176 (239)
T 1u02_A 102 DFPGLRIYR--KNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVET-YYGKMIIELRVPGVNKGSAIRSVRGERP--AII 176 (239)
T ss_dssp HSTTCEEEE--ETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEE-EECSSEEEEECTTCCHHHHHHHHHTTSC--EEE
T ss_pred hCCCcEEEe--cCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEE-EeCCcEEEEEcCCCCHHHHHHHHHhhCC--eEE
Confidence 110000000 00001110000 00000000111111111 111 111123456665 79999999988666 999
Q ss_pred EcCChhhHHHHHHc--CccEEEcccchhhHHHhCcEeecC
Q 002339 867 IGDGANDVGMIQEA--DIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 867 iGDG~ND~~ml~~A--~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
|||+.||++||+.| ++||+|++. +..||+++.+
T Consensus 177 ~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 177 AGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp EESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred EeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 99999999999999 999999765 4579998876
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.75 E-value=4.6e-08 Score=103.74 Aligned_cols=64 Identities=25% Similarity=0.343 Sum_probs=50.8
Q ss_pred hhHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccc--hhhh
Q 002339 847 KQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF--LERL 911 (934)
Q Consensus 847 ~qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~--l~~l 911 (934)
..|+..++.+.+..| ..+++|||+.||++|++.|++||+|++.... ++++||++..+... +.+.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~~~~edGv~~~ 261 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEK-VQSVADFVTDTVDNSGLYKA 261 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHTCSEECCCTTTTHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHH-HHHhcCEeeCCCCcCHHHHH
Confidence 469888888776544 5799999999999999999999999654433 89999999986433 4444
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=4.9e-08 Score=98.85 Aligned_cols=127 Identities=19% Similarity=0.230 Sum_probs=85.3
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.++|+.|++.|+++.++||+....+..+...+|+...-...+.....
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 128 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG--------------------------- 128 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC---------------------------
Confidence 56789999999999999999999999988888877777763210000000000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE-cChhhHHHHHHHHhhcC---CCEEEEEcCChhh
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGT---GKTTLAIGDGAND 873 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~~p~qK~~iv~~lk~~~---~~~v~aiGDG~ND 873 (934)
.+++. +... +.+..|...+..+.+.. ...+++|||+.||
T Consensus 129 -------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~D 171 (211)
T 1l7m_A 129 -------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGAND 171 (211)
T ss_dssp -------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred -------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHEEEEecChhH
Confidence 00000 0001 12356766555554332 3579999999999
Q ss_pred HHHHHHcCccEEEcccchhhHHHhCcEeecC--ccchhh
Q 002339 874 VGMIQEADIGIGISGVEGMQAVMASDFSIAQ--FRFLER 910 (934)
Q Consensus 874 ~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~--~~~l~~ 910 (934)
++|++.|+++++|.+.+. .+..||+++.+ +..|..
T Consensus 172 i~~~~~ag~~~~~~~~~~--~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 172 ISMFKKAGLKIAFCAKPI--LKEKADICIEKRDLREILK 208 (211)
T ss_dssp HHHHHHCSEEEEESCCHH--HHTTCSEEECSSCGGGGGG
T ss_pred HHHHHHCCCEEEECCCHH--HHhhcceeecchhHHHHHH
Confidence 999999999999985544 67889999976 544443
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.67 E-value=6.1e-08 Score=98.86 Aligned_cols=133 Identities=18% Similarity=0.211 Sum_probs=90.1
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-++.|++.+.++.|++.|++++++|+.....+..+...+|+...-..++.....
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND-------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC--------------------------
Confidence 458899999999999999999999999999999999988875321111111100
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE-cChhhHHHHHHHHhhc---CCCEEEEEcCChh
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEG---TGKTTLAIGDGAN 872 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~~p~qK~~iv~~lk~~---~~~~v~aiGDG~N 872 (934)
.++| .+... .....|...++.+.+. ....+++|||+.|
T Consensus 128 --------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~ 169 (217)
T 3m1y_A 128 --------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGAN 169 (217)
T ss_dssp --------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGG
T ss_pred --------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHH
Confidence 0000 01111 1234566666655443 3367999999999
Q ss_pred hHHHHHHcCccEEEcccchhhHHHhCcEeecCccc--hhhhHhhh
Q 002339 873 DVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF--LERLLVVH 915 (934)
Q Consensus 873 D~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~--l~~lll~~ 915 (934)
|+.|++.|+++++|++.+. .+..||+++.+.+. +..++..|
T Consensus 170 Di~~a~~aG~~~~~~~~~~--l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 170 DLSMFKHAHIKIAFNAKEV--LKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp GHHHHTTCSEEEEESCCHH--HHTTCSEEECSSBGGGGTTC----
T ss_pred HHHHHHHCCCeEEECccHH--HHHhcceeecccCHHHHHHHhccc
Confidence 9999999999999955555 88899999986443 55553333
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=2.2e-08 Score=97.60 Aligned_cols=109 Identities=15% Similarity=0.013 Sum_probs=81.3
Q ss_pred HHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCC
Q 002339 726 CIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPH 805 (934)
Q Consensus 726 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (934)
+|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999999843
Q ss_pred CcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCChhhHHHHHHcCc
Q 002339 806 AAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEADI 882 (934)
Q Consensus 806 ~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~---~~~~v~aiGDG~ND~~ml~~A~v 882 (934)
++... +.|...++.+.+. ....+++|||+.||++|++.|++
T Consensus 73 ----------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~ 116 (164)
T 3e8m_A 73 ----------------------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGI 116 (164)
T ss_dssp ----------------------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSE
T ss_pred ----------------------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence 11111 3344444443332 34689999999999999999999
Q ss_pred cEEEc-ccchhhHHHhCcEeecCcc------chhhhHhhhchhh
Q 002339 883 GIGIS-GVEGMQAVMASDFSIAQFR------FLERLLVVHGHWC 919 (934)
Q Consensus 883 GIam~-~~e~~~a~~~AD~ii~~~~------~l~~lll~~Gr~~ 919 (934)
++++. +.+. ++..||+++.+.. .+.+.++ +|+|.
T Consensus 117 ~~~~~~~~~~--~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~~ 157 (164)
T 3e8m_A 117 AGVPASAPFY--IRRLSTIFLEKRGGEGVFREFVEKVL-GINLE 157 (164)
T ss_dssp EECCTTSCHH--HHTTCSSCCCCCTTTTHHHHHHHHHT-TCCHH
T ss_pred eEEcCChHHH--HHHhCcEEeccCCCCcHHHHHHHHHH-ccCch
Confidence 99995 4444 8889999998833 3444445 66644
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.67 E-value=7e-08 Score=101.13 Aligned_cols=62 Identities=18% Similarity=0.156 Sum_probs=47.2
Q ss_pred EcCh-hhHHHHHHHHhhc----CCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 843 RVSP-KQKALVTRLVKEG----TGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 843 r~~p-~qK~~iv~~lk~~----~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
.+.| ..|+..++.+.+. ....|++|||+.||++||+.|++||+|++......+..||+++.+
T Consensus 173 ei~~g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 173 TVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp EEECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred EEeCCCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 3444 4598888888764 336899999999999999999999999654422266778887754
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.66 E-value=2.7e-08 Score=107.46 Aligned_cols=63 Identities=14% Similarity=0.225 Sum_probs=50.0
Q ss_pred EEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeec-Cc
Q 002339 842 CRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIA-QF 905 (934)
Q Consensus 842 ~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~-~~ 905 (934)
.++.|. .|+..++.+.+..| ..+++|||+.||++|++.|++||+|++.... ++..||+++. +.
T Consensus 216 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~-~k~~a~~v~~~~~ 284 (301)
T 2b30_A 216 AEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDS-AKSHAKCVLPVSH 284 (301)
T ss_dssp EEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHH-HHHHSSEECSSCT
T ss_pred eEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHH-HHhhCCEEEccCC
Confidence 445554 79988888876444 5799999999999999999999999654332 7889999987 53
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.61 E-value=3.3e-08 Score=99.28 Aligned_cols=117 Identities=18% Similarity=0.259 Sum_probs=88.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.+.++.|++.|++++++||.....+..+ +.+|+... ...+...
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~----------------------------- 127 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFE----------------------------- 127 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEE-----------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEee-----------------------------
Confidence 7889999999999999999999999988887777 77876432 1111100
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
++ ........|..|...++.+ ....+++|||+.||+.|+
T Consensus 128 ---------------~~-----------------------~~~~~~~~~~~k~~~l~~l---~~~~~i~iGD~~~Di~~~ 166 (201)
T 4ap9_A 128 ---------------DG-----------------------KFQGIRLRFRDKGEFLKRF---RDGFILAMGDGYADAKMF 166 (201)
T ss_dssp ---------------TT-----------------------EEEEEECCSSCHHHHHGGG---TTSCEEEEECTTCCHHHH
T ss_pred ---------------CC-----------------------ceECCcCCccCHHHHHHhc---CcCcEEEEeCCHHHHHHH
Confidence 00 0011345667898888887 356799999999999999
Q ss_pred HHcCccEEEcccchhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIGIGISGVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGIam~~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|++||+|.+... .||+++.++..|..+
T Consensus 167 ~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 167 ERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp HHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred HhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 99999999965543 899999987776655
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.60 E-value=2.4e-07 Score=98.21 Aligned_cols=64 Identities=23% Similarity=0.331 Sum_probs=49.7
Q ss_pred EEcChh--hHHHHHHHHhhcC---CCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 842 CRVSPK--QKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 842 ~r~~p~--qK~~iv~~lk~~~---~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
..+.|. .|+..++.+.+.. ...+++|||+.||++|++.|++|++|++.... .+..||+++.+..
T Consensus 182 ~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~-~~~~a~~v~~~~~ 250 (268)
T 1nf2_A 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEK-VKEASDIVTLTNN 250 (268)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHH-HHHHCSEECCCTT
T ss_pred EEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHH-HHhhCCEEEccCC
Confidence 355555 7988888776543 35799999999999999999999999654332 7888999987643
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.57 E-value=7.4e-07 Score=95.49 Aligned_cols=65 Identities=18% Similarity=0.252 Sum_probs=50.2
Q ss_pred EEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 841 CCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 841 ~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
+..++|. .|+..++.+.+..| ..+++|||+.||++|++.|++||+|++... ..+..||+++.+..
T Consensus 207 ~lei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~-~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 207 NFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARE-DIKSIADAVTLTND 276 (288)
T ss_dssp EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred cEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCH-HHHhhCceeecCCC
Confidence 3445554 68888888776544 579999999999999999999999965433 27888999987643
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.55 E-value=3.1e-07 Score=97.54 Aligned_cols=59 Identities=17% Similarity=0.185 Sum_probs=47.6
Q ss_pred hhHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 847 KQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 847 ~qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
..|...++.+.+..| ..+++|||+.||++|++.|++||+|++.... ++..||+++.+..
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~-~k~~a~~v~~~~~ 251 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAEN-IKQIARYATDDNN 251 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHH-HHHHCSEECCCGG
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHH-HHHhCCeeCcCCC
Confidence 378888888765433 5799999999999999999999999654332 7889999987643
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=9.8e-08 Score=95.30 Aligned_cols=110 Identities=12% Similarity=0.159 Sum_probs=79.8
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCC
Q 002339 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (934)
Q Consensus 725 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (934)
.+|+.|+++|++++++||+....+..+++.+|+..
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~--------------------------------------------- 94 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH--------------------------------------------- 94 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce---------------------------------------------
Confidence 38999999999999999999999999999888742
Q ss_pred CCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCChhhHHHHHHcC
Q 002339 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEAD 881 (934)
Q Consensus 805 ~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~---~~~~v~aiGDG~ND~~ml~~A~ 881 (934)
++.. ...|...++.+.+. ....+++|||+.||+.|++.|+
T Consensus 95 -----------------------------------~~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag 137 (188)
T 2r8e_A 95 -----------------------------------LYQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVG 137 (188)
T ss_dssp -----------------------------------EECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSS
T ss_pred -----------------------------------eecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCC
Confidence 1110 12344444444332 2367999999999999999999
Q ss_pred ccEEEc-ccchhhHHHhCcEeecCc-------cchhhhHhhhchh
Q 002339 882 IGIGIS-GVEGMQAVMASDFSIAQF-------RFLERLLVVHGHW 918 (934)
Q Consensus 882 vGIam~-~~e~~~a~~~AD~ii~~~-------~~l~~lll~~Gr~ 918 (934)
+++++. +.+. ++..||+++.+. ..+..++-.+|+|
T Consensus 138 ~~~~~~~~~~~--~~~~ad~v~~~~~~~g~~~~~l~~ll~~~~~~ 180 (188)
T 2r8e_A 138 LSVAVADAHPL--LIPRADYVTRIAGGRGAVREVCDLLLLAQGKL 180 (188)
T ss_dssp EEEECTTSCTT--TGGGSSEECSSCTTTTHHHHHHHHHHHHTTCC
T ss_pred CEEEecCcCHH--HHhcCCEEEeCCCCCcHHHHHHHHHHHhcCcH
Confidence 999985 3433 677899999886 2244444455554
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.54 E-value=3e-07 Score=104.12 Aligned_cols=133 Identities=21% Similarity=0.246 Sum_probs=95.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+...-...+.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~------------------------------- 304 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELE------------------------------- 304 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEE-------------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEE-------------------------------
Confidence 7899999999999999999999999999999999999998431111010
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE-----cChhhHHHHHHHHhhcC---CCEEEEEcC
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-----VSPKQKALVTRLVKEGT---GKTTLAIGD 869 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-----~~p~qK~~iv~~lk~~~---~~~v~aiGD 869 (934)
+.+| .+..+ ..++.|..+++.+.+.. ...+++|||
T Consensus 305 -------------~~dg------------------------~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD 347 (415)
T 3p96_A 305 -------------IVDG------------------------TLTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGD 347 (415)
T ss_dssp -------------EETT------------------------EEEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEEC
T ss_pred -------------EeCC------------------------EEEeeEccCCCCCcchHHHHHHHHHHcCcChhhEEEEEC
Confidence 0111 12222 12566776666665433 367999999
Q ss_pred ChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccc--hhhhHhhhchhhhH
Q 002339 870 GANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF--LERLLVVHGHWCYK 921 (934)
Q Consensus 870 G~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~--l~~lll~~Gr~~~~ 921 (934)
|.||++|++.|++|+++++.+. ++..||+++...+. +..+ +-.+|.-+.
T Consensus 348 ~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~~~l~~ll~~-l~~~~~~~~ 398 (415)
T 3p96_A 348 GANDIDMLAAAGLGIAFNAKPA--LREVADASLSHPYLDTVLFL-LGVTRGEIE 398 (415)
T ss_dssp SGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECSSCTTHHHHH-TTCCHHHHH
T ss_pred CHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEccCCHHHHHHH-hCCCHHHHH
Confidence 9999999999999999966655 88899999876433 4444 455555444
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.51 E-value=4.4e-07 Score=92.21 Aligned_cols=133 Identities=18% Similarity=0.235 Sum_probs=85.2
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhh
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMI 798 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (934)
+.+++.+.++.|++.|++++++|+.....+..+.+.+|+.... .+..
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~------------------------------- 129 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFAV------------------------------- 129 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEEE-------------------------------
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEEe-------------------------------
Confidence 7899999999999999999999999999999999998884311 1100
Q ss_pred hccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHH
Q 002339 799 KLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQ 878 (934)
Q Consensus 799 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~ 878 (934)
.++.++.... ..+......|..|...+..........+++|||+.||++|++
T Consensus 130 ----------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~ 181 (219)
T 3kd3_A 130 ----------ETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYE 181 (219)
T ss_dssp ----------EEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHH
T ss_pred ----------eeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHh
Confidence 0011000000 000111134455655554442225688999999999999996
Q ss_pred H--cCccEEEc-ccchhhHHHhCcEeecCccchhhhH
Q 002339 879 E--ADIGIGIS-GVEGMQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 879 ~--A~vGIam~-~~e~~~a~~~AD~ii~~~~~l~~ll 912 (934)
. +.+|+++. +......+..||+++.++..|..+|
T Consensus 182 ~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 182 KGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp HTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred CCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 5 22445442 2222236788999999887777663
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.49 E-value=4.8e-07 Score=98.06 Aligned_cols=120 Identities=18% Similarity=0.179 Sum_probs=84.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.++++.|+++|+++.++||.....+..+.+.+|+...-...+.....
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg--------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN--------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------------------
Confidence 48899999999999999999999999999999999999985311111111000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEE-EcChhhHHHHHHHHhhc---CCCEEEEEcCChhh
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICC-RVSPKQKALVTRLVKEG---TGKTTLAIGDGAND 873 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~-r~~p~qK~~iv~~lk~~---~~~~v~aiGDG~ND 873 (934)
..+|. +.. -..++.|..+++.+.+. ....+++|||+.||
T Consensus 232 -------------~~tg~------------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~D 274 (317)
T 4eze_A 232 -------------VLTDN------------------------ITLPIMNAANKKQTLVDLAARLNIATENIIACGDGAND 274 (317)
T ss_dssp -------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred -------------eeeee------------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHH
Confidence 00000 000 01235565555554432 33679999999999
Q ss_pred HHHHHHcCccEEEcccchhhHHHhCcEeec
Q 002339 874 VGMIQEADIGIGISGVEGMQAVMASDFSIA 903 (934)
Q Consensus 874 ~~ml~~A~vGIam~~~e~~~a~~~AD~ii~ 903 (934)
+.|++.||+|+++++.+. .+..||.++.
T Consensus 275 i~aa~~AG~~va~~~~~~--~~~~a~~~i~ 302 (317)
T 4eze_A 275 LPMLEHAGTGIAWKAKPV--VREKIHHQIN 302 (317)
T ss_dssp HHHHHHSSEEEEESCCHH--HHHHCCEEES
T ss_pred HHHHHHCCCeEEeCCCHH--HHHhcCeeeC
Confidence 999999999999965555 7788998875
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.49 E-value=5.4e-07 Score=98.73 Aligned_cols=76 Identities=18% Similarity=0.220 Sum_probs=57.8
Q ss_pred hhhHHHHHHHHhhc-CCCEEEEEcCChhhHHHHHHc----CccEEEcccchhhHHHhCcEeecCccc------hhhhHhh
Q 002339 846 PKQKALVTRLVKEG-TGKTTLAIGDGANDVGMIQEA----DIGIGISGVEGMQAVMASDFSIAQFRF------LERLLVV 914 (934)
Q Consensus 846 p~qK~~iv~~lk~~-~~~~v~aiGDG~ND~~ml~~A----~vGIam~~~e~~~a~~~AD~ii~~~~~------l~~lll~ 914 (934)
+.+|+..++.+... ..+.|++||||.||++|++.| ++||+| +... .++..||+++.+.+. |.++ +.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~-~lk~~Ad~v~~~~~~dGV~~~l~~~-~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNE-YALKHADVVIISPTAMSEAKVIELF-ME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCH-HHHTTCSEEEECSSTHHHHHHHHHH-HH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCH-HHHhhCcEEecCCCCCHHHHHHHHH-HH
Confidence 56798888866541 114499999999999999999 999999 5433 288999999976333 5555 78
Q ss_pred hchhhhHHhhh
Q 002339 915 HGHWCYKRIAQ 925 (934)
Q Consensus 915 ~Gr~~~~~i~~ 925 (934)
.||..+ ++-+
T Consensus 282 ~~~~~~-~~~~ 291 (332)
T 1y8a_A 282 RKERAF-EVLS 291 (332)
T ss_dssp HGGGGG-GGGG
T ss_pred cCCchh-HHHH
Confidence 999888 6555
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=8.5e-07 Score=84.41 Aligned_cols=107 Identities=15% Similarity=0.285 Sum_probs=77.8
Q ss_pred cCChhHHHHHHHHHHC-CcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccc
Q 002339 551 AESPDEAAFLVAAREF-GFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGAD 629 (934)
Q Consensus 551 ~~sp~e~al~~~a~~~-g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 629 (934)
++||...|++++|+.. |+.... ... ......+|++..++..|.+ +| ..+.+|++
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~-------------------~~~-~~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~ 103 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERD-------------------VQS-LHATFVPFTAQSRMSGINI---DN--RMIRKGSV 103 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCC-------------------HHH-HTCEEEEEETTTTEEEEEE---TT--EEEEEEEH
T ss_pred CCCHHHHHHHHHHHHhcCCCccc-------------------ccc-cccceeeccccCCCCeEEE---CC--EEEEEeCc
Confidence 5799999999999976 653311 000 0011346777777667644 44 45789999
Q ss_pred hhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceE
Q 002339 630 SIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLIL 709 (934)
Q Consensus 630 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~ 709 (934)
..|..++...+-..+..+.+.+++++.+|.+++++|. |..+
T Consensus 104 ~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~---------------------------------------d~~l 144 (156)
T 1svj_A 104 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVE---------------------------------------GSRV 144 (156)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEE---------------------------------------TTEE
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEE---------------------------------------CCEE
Confidence 8887777654434455678889999999999999993 6689
Q ss_pred EEeeeecccCCC
Q 002339 710 VGATAVEDKLQK 721 (934)
Q Consensus 710 lG~i~i~D~lr~ 721 (934)
+|++++.|++||
T Consensus 145 ~GvIalaD~iK~ 156 (156)
T 1svj_A 145 LGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEecCCCC
Confidence 999999999996
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=2.9e-07 Score=96.05 Aligned_cols=181 Identities=10% Similarity=0.112 Sum_probs=94.3
Q ss_pred CchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCch---hHHHHHHHHHHHhH-HHHHHHHHh
Q 002339 721 KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD---SVGKAAKEAVKDNI-LMQITNASQ 796 (934)
Q Consensus 721 ~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~ 796 (934)
+.+.++|++++ +|++++++|||+...+..+..++++..+ ...++.+|.... .............. ...+.....
T Consensus 22 ~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~-~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (244)
T 1s2o_A 22 EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEP-DYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIAD 99 (244)
T ss_dssp HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCC-SEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCC-CEEEECCCcEEEeCCCcChHHHHHHhccccHHHHHHHHH
Confidence 45667777755 6899999999999999999999776422 234443433110 00001111111000 000110000
Q ss_pred hhhc---c---CCCCCcEEEEEcChhhhHhhhHHHHHHHHhh----hhccCceEEEEcChh--hHHHHHHHHhhcCC---
Q 002339 797 MIKL---E---RDPHAAYALIIEGKTLAYALEDDMKHHFLGL----AVECASVICCRVSPK--QKALVTRLVKEGTG--- 861 (934)
Q Consensus 797 ~~~~---~---~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~----~~~~~~~i~~r~~p~--qK~~iv~~lk~~~~--- 861 (934)
.+.. . .....+..+..+....... .+.+.+.+... ........+..+.|. .|+..++.+.+..+
T Consensus 100 ~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~ 178 (244)
T 1s2o_A 100 GFEALKPQSPLEQNPWKISYHLDPQACPTV-IDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEP 178 (244)
T ss_dssp TCTTEEECCGGGCBTTBEEEEECTTSCTHH-HHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCG
T ss_pred hccCccccCcccCCCeEEEEEeChhhHHHH-HHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHhCCCH
Confidence 0000 0 0111222333222221111 11233333211 000001123455555 69988888876544
Q ss_pred CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHh-------CcEeecCc
Q 002339 862 KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMA-------SDFSIAQF 905 (934)
Q Consensus 862 ~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~-------AD~ii~~~ 905 (934)
..+++|||+.||++|++.|++||+|++.... ++.. ||++..+.
T Consensus 179 ~~~~~~GD~~nD~~m~~~~g~~va~~na~~~-~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 179 SQTLVCGDSGNDIGLFETSARGVIVRNAQPE-LLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp GGEEEEECSGGGHHHHTSSSEEEECTTCCHH-HHHHHHHHCCTTEEECSSC
T ss_pred HHEEEECCchhhHHHHhccCcEEEEcCCcHH-HHHHHhcccccceeecCCc
Confidence 5799999999999999999999999654332 6664 88988764
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=9.2e-07 Score=93.14 Aligned_cols=54 Identities=11% Similarity=0.205 Sum_probs=45.1
Q ss_pred hhHHHHHHHHhhcCC-----CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 847 KQKALVTRLVKEGTG-----KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 847 ~qK~~iv~~lk~~~~-----~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
..|+..++.+.+..+ ..+++|||+.||++|++.|++||+|++... + .|+++...
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCC
Confidence 588988888876544 679999999999999999999999976654 2 77888765
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=4.5e-07 Score=91.62 Aligned_cols=130 Identities=16% Similarity=0.089 Sum_probs=88.1
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCC--ceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQG--MKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (934)
.+.+++.+.++.|++.|++++++|+.....+..+...+|+...- ..+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i------------------------------- 118 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADV------------------------------- 118 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGE-------------------------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceE-------------------------------
Confidence 56799999999999999999999999998888888888874311 010
Q ss_pred hhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
+++.. ....-.|.--..+.+.+.- ....+++|||+.||+.
T Consensus 119 ----------------~~~~~-----------------------~~~kp~~~~~~~~~~~~g~-~~~~~i~iGD~~~Di~ 158 (205)
T 3m9l_A 119 ----------------LGRDE-----------------------APPKPHPGGLLKLAEAWDV-SPSRMVMVGDYRFDLD 158 (205)
T ss_dssp ----------------ECTTT-----------------------SCCTTSSHHHHHHHHHTTC-CGGGEEEEESSHHHHH
T ss_pred ----------------EeCCC-----------------------CCCCCCHHHHHHHHHHcCC-CHHHEEEECCCHHHHH
Confidence 00000 0000011111223333322 3467999999999999
Q ss_pred HHHHcCc-cEEEc-ccchhhHHHhCcEeecCccchhhhHhhhchhhh
Q 002339 876 MIQEADI-GIGIS-GVEGMQAVMASDFSIAQFRFLERLLVVHGHWCY 920 (934)
Q Consensus 876 ml~~A~v-GIam~-~~e~~~a~~~AD~ii~~~~~l~~lll~~Gr~~~ 920 (934)
|.+.|++ +|+|. +.+. .+..||+++.++..|..++=.+++..|
T Consensus 159 ~a~~aG~~~i~v~~~~~~--~~~~ad~v~~~~~el~~~~~~~~~~~~ 203 (205)
T 3m9l_A 159 CGRAAGTRTVLVNLPDNP--WPELTDWHARDCAQLRDLLSAEGHHHH 203 (205)
T ss_dssp HHHHHTCEEEECSSSSCS--CGGGCSEECSSHHHHHHHHHHTTCC--
T ss_pred HHHHcCCEEEEEeCCCCc--ccccCCEEeCCHHHHHHHHHhcccccc
Confidence 9999999 99995 4433 677899999998888777555555443
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.36 E-value=4.8e-07 Score=93.50 Aligned_cols=129 Identities=21% Similarity=0.233 Sum_probs=86.7
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
..+.+++.+.++.|++.|++++++|+.....+..+...+|+...-..
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 149 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--------------------------------- 149 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee---------------------------------
Confidence 45789999999999999999999999999888888888887532111
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~m 876 (934)
++.+.... ...-.|+--..+.+.+.- ....+++|||+.||+.|
T Consensus 150 --------------~~~~~~~~----------------------~~kp~~~~~~~~~~~lg~-~~~~~i~vGD~~~Di~~ 192 (237)
T 4ex6_A 150 --------------IAGDDSVE----------------------RGKPHPDMALHVARGLGI-PPERCVVIGDGVPDAEM 192 (237)
T ss_dssp --------------EECTTTSS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEESSHHHHHH
T ss_pred --------------EEeCCCCC----------------------CCCCCHHHHHHHHHHcCC-CHHHeEEEcCCHHHHHH
Confidence 11111000 000011112233444432 44689999999999999
Q ss_pred HHHcCc---cEEEcccchhhHHH-hCcEeecCccchhhhHhhhc
Q 002339 877 IQEADI---GIGISGVEGMQAVM-ASDFSIAQFRFLERLLVVHG 916 (934)
Q Consensus 877 l~~A~v---GIam~~~e~~~a~~-~AD~ii~~~~~l~~lll~~G 916 (934)
.+.|++ +|++++......+. .||+++.++..|..+ +..|
T Consensus 193 a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~-l~~~ 235 (237)
T 4ex6_A 193 GRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA-VLDG 235 (237)
T ss_dssp HHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH-HHHC
T ss_pred HHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH-HHcc
Confidence 999999 66665333222444 799999998888776 4433
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.36 E-value=2.5e-06 Score=88.03 Aligned_cols=171 Identities=13% Similarity=0.137 Sum_probs=94.8
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCC------------chhHHHHHHHHHH
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALN------------SDSVGKAAKEAVK 784 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~------------~~~~~~~~~~~~~ 784 (934)
..+.+.+.++|++++++|++++++|||....+..+...+|+.. ..+..++.. .+.....+
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~l~~~~~i~----- 90 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---PVVAEDGGAISYKKKRIFLASMDEEWILW----- 90 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEEETTEEEESCCCSHHHHHH-----
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC---eEEEeCCcEEEeCCEEEEeccHHHHHHHH-----
Confidence 3577889999999999999999999999999999998888632 122222210 01111111
Q ss_pred HhHHHHHHHHHhhhhc---cCCCCCcEEEEEc-ChhhhHhhhHHHHHHHHhhhhccCce---EEEEcCh--hhHHHHHHH
Q 002339 785 DNILMQITNASQMIKL---ERDPHAAYALIIE-GKTLAYALEDDMKHHFLGLAVECASV---ICCRVSP--KQKALVTRL 855 (934)
Q Consensus 785 ~~~~~~~~~~~~~~~~---~~~~~~~~~lvi~-g~~l~~~~~~~~~~~~~~~~~~~~~~---i~~r~~p--~qK~~iv~~ 855 (934)
..+......... ........ .+.+ +..-. ..+ .+.+.+. .....+ .+....| ..|...++.
T Consensus 91 ----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~-~~~~~~~---~~~~~~~~~~~~ei~~~~~~K~~~~~~ 160 (231)
T 1wr8_A 91 ----NEIRKRFPNARTSYTMPDRRAGL-VIMRETINVE-TVR-EIINELN---LNLVAVDSGFAIHVKKPWINKGSGIEK 160 (231)
T ss_dssp ----HHHHHHCTTCCBCTTGGGCSSCE-EECTTTSCHH-HHH-HHHHHTT---CSCEEEECSSCEEEECTTCCHHHHHHH
T ss_pred ----HHHHHhCCCceEEecCCCceeeE-EEECCCCCHH-HHH-HHHHhcC---CcEEEEecCcEEEEecCCCChHHHHHH
Confidence 111100000000 00000011 1222 11111 011 1111111 111111 1234444 368878777
Q ss_pred HhhcC---CCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 856 VKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 856 lk~~~---~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
+.+.. ...+++|||+.||++|++.|++|++|++.... .+..||+++.+..
T Consensus 161 ~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~~-~~~~a~~v~~~~~ 213 (231)
T 1wr8_A 161 ASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKI-LKENADYVTKKEY 213 (231)
T ss_dssp HHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHTTCSEECSSCH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCHH-HHhhCCEEecCCC
Confidence 76532 35799999999999999999999999644332 7788999987643
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.35 E-value=1.1e-06 Score=90.06 Aligned_cols=124 Identities=15% Similarity=0.123 Sum_probs=86.9
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-++.+++.+.++.|++.|++++++|+.....+..+...+|+...-..+
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 132 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAI-------------------------------- 132 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeee--------------------------------
Confidence 357899999999999999999999999888888888888875321111
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcCh--hhHHHHHHHHhhc---CCCEEEEEcCCh
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEG---TGKTTLAIGDGA 871 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~lk~~---~~~~v~aiGDG~ 871 (934)
+.+...+ .-|...++.+.+. ....+++|||+.
T Consensus 133 -------------------------------------------~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~ 169 (226)
T 3mc1_A 133 -------------------------------------------VGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDRE 169 (226)
T ss_dssp -------------------------------------------EEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred -------------------------------------------eccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCH
Confidence 2222111 2344444433322 335899999999
Q ss_pred hhHHHHHHcCc---cEEEcc-cchhhHHHhCcEeecCccchhhhHhhh
Q 002339 872 NDVGMIQEADI---GIGISG-VEGMQAVMASDFSIAQFRFLERLLVVH 915 (934)
Q Consensus 872 ND~~ml~~A~v---GIam~~-~e~~~a~~~AD~ii~~~~~l~~lll~~ 915 (934)
||+.|.+.|++ +|++++ ......+..||+++.++..|..++..+
T Consensus 170 ~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~~ 217 (226)
T 3mc1_A 170 YDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILEL 217 (226)
T ss_dssp HHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHTC
T ss_pred HHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHHH
Confidence 99999999999 555543 222212578999999988888875433
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.35 E-value=1.3e-07 Score=99.75 Aligned_cols=64 Identities=22% Similarity=0.336 Sum_probs=50.0
Q ss_pred hhHHHHHHHHhhcC---CCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccc--hhhh
Q 002339 847 KQKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF--LERL 911 (934)
Q Consensus 847 ~qK~~iv~~lk~~~---~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~--l~~l 911 (934)
..|...++.+.+.. ...+++|||+.||++|++.|++|++|++.... .+..||+++.+... +..+
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~-~~~~a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKED-VKAAADYVTAPIDEDGISKA 254 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHSSEECCCGGGTHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHH-HHhhCCEEeccCchhhHHHH
Confidence 36887777776543 35799999999999999999999999654332 78899999987665 6555
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.33 E-value=1.3e-06 Score=84.60 Aligned_cols=104 Identities=13% Similarity=0.101 Sum_probs=77.6
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhh
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMI 798 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (934)
+.+++.++|+.|+++|++++++||+....+..+.+.+|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 45678899999999999999999999999999999988742
Q ss_pred hccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHH----HHHHhhcCCCEEEEEcCChhhH
Q 002339 799 KLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALV----TRLVKEGTGKTTLAIGDGANDV 874 (934)
Q Consensus 799 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~i----v~~lk~~~~~~v~aiGDG~ND~ 874 (934)
++.. +..|... ++.+.- ....+++|||+.||+
T Consensus 78 -----------------------------------------~~~~--~kp~~~~~~~~~~~~~~-~~~~~~~vGD~~~Di 113 (162)
T 2p9j_A 78 -----------------------------------------IYTG--SYKKLEIYEKIKEKYSL-KDEEIGFIGDDVVDI 113 (162)
T ss_dssp -----------------------------------------EEEC--C--CHHHHHHHHHHTTC-CGGGEEEEECSGGGH
T ss_pred -----------------------------------------hccC--CCCCHHHHHHHHHHcCC-CHHHEEEECCCHHHH
Confidence 1111 1122222 233322 346799999999999
Q ss_pred HHHHHcCccEEEc-ccchhhHHHhCcEeecCccc
Q 002339 875 GMIQEADIGIGIS-GVEGMQAVMASDFSIAQFRF 907 (934)
Q Consensus 875 ~ml~~A~vGIam~-~~e~~~a~~~AD~ii~~~~~ 907 (934)
.|.+.|++++++. +.+. .+..||+++.+...
T Consensus 114 ~~a~~ag~~~~~~~~~~~--~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 114 EVMKKVGFPVAVRNAVEE--VRKVAVYITQRNGG 145 (162)
T ss_dssp HHHHHSSEEEECTTSCHH--HHHHCSEECSSCSS
T ss_pred HHHHHCCCeEEecCccHH--HHhhCCEEecCCCC
Confidence 9999999999884 4433 67789999988554
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.29 E-value=2.2e-06 Score=87.39 Aligned_cols=123 Identities=11% Similarity=0.080 Sum_probs=81.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
.+.+++.+.++.|++.|++++++|+.....+..+...+|+...-..++.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~------------------------------- 142 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALAS------------------------------- 142 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE-------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEe-------------------------------
Confidence 4568999999999999999999999988877777777776432111111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
+.... ...-.|.--..+.+.+.- ....+++|||+.||+.|+
T Consensus 143 ----------------~~~~~----------------------~~kp~~~~~~~~~~~~~i-~~~~~i~iGD~~nDi~~a 183 (226)
T 1te2_A 143 ----------------AEKLP----------------------YSKPHPQVYLDCAAKLGV-DPLTCVALEDSVNGMIAS 183 (226)
T ss_dssp ----------------CTTSS----------------------CCTTSTHHHHHHHHHHTS-CGGGEEEEESSHHHHHHH
T ss_pred ----------------ccccC----------------------CCCCChHHHHHHHHHcCC-CHHHeEEEeCCHHHHHHH
Confidence 00000 000011122233344432 446799999999999999
Q ss_pred HHcCccEEE----cccchhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIGIGI----SGVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGIam----~~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|++++++ .+... ..+..||+++.++..|..-
T Consensus 184 ~~aG~~~~~~~~~~~~~~-~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 184 KAARMRSIVVPAPEAQND-PRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp HHTTCEEEECCCTTTTTC-GGGGGSSEECSCGGGCCHH
T ss_pred HHcCCEEEEEcCCCCccc-ccccccCeEECCHHHHhHH
Confidence 999999988 22221 2577899999987775543
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.29 E-value=1.5e-06 Score=89.23 Aligned_cols=129 Identities=20% Similarity=0.229 Sum_probs=87.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.++|+.|+++|++++++||.....+..+.+.+|+... ..+...
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--~~f~~~----------------------------- 134 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFANR----------------------------- 134 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEEC-----------------------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcc--cEEeee-----------------------------
Confidence 6889999999999999999999999999999999999998531 111000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE-c-----ChhhHHHHHHHHhhcCC-CEEEEEcCC
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-V-----SPKQKALVTRLVKEGTG-KTTLAIGDG 870 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~-----~p~qK~~iv~~lk~~~~-~~v~aiGDG 870 (934)
+..+. ...+.+. . .+..|..+++.+.+..| ..+++|||+
T Consensus 135 ------------~~~~~----------------------~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs 180 (225)
T 1nnl_A 135 ------------LKFYF----------------------NGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG 180 (225)
T ss_dssp ------------EEECT----------------------TSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESS
T ss_pred ------------EEEcC----------------------CCcEecCCCCCcccCCCchHHHHHHHHHHcCCCcEEEEeCc
Confidence 00000 0001111 1 12356666665544333 679999999
Q ss_pred hhhHHHHHHcCccEEEccc-chhhHHHhCcEeecCccchhhh
Q 002339 871 ANDVGMIQEADIGIGISGV-EGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 871 ~ND~~ml~~A~vGIam~~~-e~~~a~~~AD~ii~~~~~l~~l 911 (934)
.||+.|.+.|+++|+++.. ........+|+++.++..|..+
T Consensus 181 ~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 181 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp HHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred HHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 9999999999998888532 2222456799999988776655
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.25 E-value=3.8e-06 Score=86.44 Aligned_cols=121 Identities=15% Similarity=0.095 Sum_probs=82.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
.+.|++.+.|+.|++.|+++.++||.....+..+++.+|+..--...+..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~------------------------------ 141 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEY------------------------------ 141 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEE------------------------------
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEE------------------------------
Confidence 57999999999999999999999999999999999999984210000000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE-----cChhhHHHHHHHHhhcCC------CEEEE
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-----VSPKQKALVTRLVKEGTG------KTTLA 866 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-----~~p~qK~~iv~~lk~~~~------~~v~a 866 (934)
.+| .+..+ ..+..|...++.+.+..+ ..+++
T Consensus 142 --------------~~~------------------------~~~g~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~ 183 (232)
T 3fvv_A 142 --------------RDG------------------------RYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYF 183 (232)
T ss_dssp --------------ETT------------------------EEEEEEESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEE
T ss_pred --------------ECC------------------------EEeeeecCCCCcchHHHHHHHHHHHHcCCCcCchhheEE
Confidence 000 01111 224567666655443234 68999
Q ss_pred EcCChhhHHHHHHcCccEEEcccch-hhHHHhCcEeecCcc
Q 002339 867 IGDGANDVGMIQEADIGIGISGVEG-MQAVMASDFSIAQFR 906 (934)
Q Consensus 867 iGDG~ND~~ml~~A~vGIam~~~e~-~~a~~~AD~ii~~~~ 906 (934)
+||+.||++|++.|++++++...+. ........+.+..|+
T Consensus 184 vGDs~~D~~~~~~ag~~~~~~~~~~l~~~a~~~~w~~~~~~ 224 (232)
T 3fvv_A 184 YSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVIDLF 224 (232)
T ss_dssp EECCGGGHHHHHHSSEEEEESCCHHHHHHHHHHTCEEECCC
T ss_pred EeCCHhhHHHHHhCCCeEEECcCHHHHHHHHHCCCcEeehh
Confidence 9999999999999999999965443 112223345555553
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.25 E-value=3.1e-06 Score=89.86 Aligned_cols=41 Identities=7% Similarity=0.072 Sum_probs=37.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.+-+.+.++|++|+++|++++++|||....+..+...+++.
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 45578999999999999999999999999999999998863
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.23 E-value=3.5e-06 Score=87.22 Aligned_cols=121 Identities=13% Similarity=0.071 Sum_probs=84.2
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-++.+++.+.++.|++.|++++++|+.....+..+...+|+...-..+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 156 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYI-------------------------------- 156 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEE--------------------------------
Confidence 357899999999999999999999999888888888888875422111
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcCh--hhHHHHHHHHhhc---C-CCEEEEEcCC
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEG---T-GKTTLAIGDG 870 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~lk~~---~-~~~v~aiGDG 870 (934)
+++...+ .-|..+++.+.+. . ...+++|||+
T Consensus 157 -------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~ 193 (240)
T 3sd7_A 157 -------------------------------------------AGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDR 193 (240)
T ss_dssp -------------------------------------------EEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESS
T ss_pred -------------------------------------------EeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCC
Confidence 1111111 2233333333222 4 5689999999
Q ss_pred hhhHHHHHHcCcc---EEEcc-cchhhHHHhCcEeecCccchhhhH
Q 002339 871 ANDVGMIQEADIG---IGISG-VEGMQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 871 ~ND~~ml~~A~vG---Iam~~-~e~~~a~~~AD~ii~~~~~l~~ll 912 (934)
.||+.|.+.|++. |+++. ......+..||+++.++..|..+|
T Consensus 194 ~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 194 KYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 9999999999983 33332 222212478999999998887774
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.21 E-value=6.8e-06 Score=82.85 Aligned_cols=123 Identities=19% Similarity=0.199 Sum_probs=88.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.+.++.|++. ++++++|+.....+..+.+.+|+...-...+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~-------------------------------- 115 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKL-------------------------------- 115 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEE--------------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceeccee--------------------------------
Confidence 5789999999999999 9999999999999999999998753110001
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEE--EcChhhHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICC--RVSPKQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~--r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
+..+. ..... .-.|..|..+++.+.. ....+++|||+.||+.
T Consensus 116 -------------~~~~~----------------------~~~~~~~~p~p~~~~~~l~~l~~-~~~~~~~iGD~~~Di~ 159 (206)
T 1rku_A 116 -------------EIDDS----------------------DRVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDSYNDTT 159 (206)
T ss_dssp -------------EECTT----------------------SCEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECSSTTHH
T ss_pred -------------EEcCC----------------------ceEEeeecCCCchHHHHHHHHHh-cCCEEEEEeCChhhHH
Confidence 00000 00111 1457788888998876 6789999999999999
Q ss_pred HHHHcCccEEEcccchhhHHHh-CcEe-ecCccchhhh
Q 002339 876 MIQEADIGIGISGVEGMQAVMA-SDFS-IAQFRFLERL 911 (934)
Q Consensus 876 ml~~A~vGIam~~~e~~~a~~~-AD~i-i~~~~~l~~l 911 (934)
|.+.|++++++.+.+. .+.. ++++ +.++..+..+
T Consensus 160 ~a~~aG~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 160 MLSEAHAGILFHAPEN--VIREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp HHHHSSEEEEESCCHH--HHHHCTTSCEECSHHHHHHH
T ss_pred HHHhcCccEEECCcHH--HHHHHhhhccccchHHHHHH
Confidence 9999999999855443 4444 4554 5565555544
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.16 E-value=2.1e-06 Score=88.21 Aligned_cols=129 Identities=16% Similarity=0.046 Sum_probs=85.2
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-++.+++.+.++.|++.|++++++|+.....+..+...+|+...-..+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 137 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINI-------------------------------- 137 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCE--------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhee--------------------------------
Confidence 356799999999999999999999999998888888888875321111
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCChhh
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGAND 873 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~---~~~~v~aiGDG~ND 873 (934)
+.+... ....-|..+++.+.+. ....+++|||+.||
T Consensus 138 ---------------~~~~~~--------------------------~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~D 176 (233)
T 3s6j_A 138 ---------------VTRDDV--------------------------SYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWD 176 (233)
T ss_dssp ---------------ECGGGS--------------------------SCCTTSTHHHHHHHHHTTCCGGGEEEEESSHHH
T ss_pred ---------------eccccC--------------------------CCCCCChHHHHHHHHHhCCCHHHEEEEeCCHHh
Confidence 111100 0011122233333222 34679999999999
Q ss_pred HHHHHHcCc-cEEE--cccchhhHHHh-CcEeecCccchhhhHhhhchh
Q 002339 874 VGMIQEADI-GIGI--SGVEGMQAVMA-SDFSIAQFRFLERLLVVHGHW 918 (934)
Q Consensus 874 ~~ml~~A~v-GIam--~~~e~~~a~~~-AD~ii~~~~~l~~lll~~Gr~ 918 (934)
+.|.+.|++ +|++ +.......+.. ||+++.++..|..+|-.+++.
T Consensus 177 i~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~~ 225 (233)
T 3s6j_A 177 MLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEIASR 225 (233)
T ss_dssp HHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGGGTCC-
T ss_pred HHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHHHHhhh
Confidence 999999999 3444 32323224454 999999988888875444443
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.15 E-value=6.8e-06 Score=84.45 Aligned_cols=118 Identities=17% Similarity=0.154 Sum_probs=74.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.+.++.|++.|+++.++|+... +..+...+|+...-..
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~---------------------------------- 135 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA---------------------------------- 135 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE----------------------------------
Confidence 4789999999999999999999999754 6666777776432111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
++.+... ....-.|.--..+.+.+.- ....+++|||+.||+.|.
T Consensus 136 -------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~lgi-~~~~~i~vGDs~~Di~~a 179 (233)
T 3nas_A 136 -------------IVDPTTL----------------------AKGKPDPDIFLTAAAMLDV-SPADCAAIEDAEAGISAI 179 (233)
T ss_dssp -------------ECCC-------------------------------CCHHHHHHHHHTS-CGGGEEEEECSHHHHHHH
T ss_pred -------------EeeHhhC----------------------CCCCCChHHHHHHHHHcCC-CHHHEEEEeCCHHHHHHH
Confidence 1111000 0000111112334444443 457899999999999999
Q ss_pred HHcCccEEEcccchhhHHHhCcEeecCccchh
Q 002339 878 QEADIGIGISGVEGMQAVMASDFSIAQFRFLE 909 (934)
Q Consensus 878 ~~A~vGIam~~~e~~~a~~~AD~ii~~~~~l~ 909 (934)
+.|+++++|.+.... .+ .||+++.++..+.
T Consensus 180 ~~aG~~~~~~~~~~~-~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 180 KSAGMFAVGVGQGQP-ML-GADLVVRQTSDLT 209 (233)
T ss_dssp HHTTCEEEECC---------CSEECSSGGGCC
T ss_pred HHcCCEEEEECCccc-cc-cCCEEeCChHhCC
Confidence 999999999654431 34 8999999877654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.13 E-value=7.5e-06 Score=83.28 Aligned_cols=123 Identities=16% Similarity=0.111 Sum_probs=78.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
.+.+++.+.++.|++.|++++++|+.....+......+|+...-..+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~--------------------------------- 135 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDII--------------------------------- 135 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEE---------------------------------
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeee---------------------------------
Confidence 34689999999999999999999999988888887777764321111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcCh--hhHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
+.+.... ...| .--..+.+.+.- ....+++|||+.||+.
T Consensus 136 --------------~~~~~~~------------------------~~k~~~~~~~~~~~~~~~-~~~~~i~iGD~~nDi~ 176 (225)
T 3d6j_A 136 --------------IGGEDVT------------------------HHKPDPEGLLLAIDRLKA-CPEEVLYIGDSTVDAG 176 (225)
T ss_dssp --------------ECGGGCS------------------------SCTTSTHHHHHHHHHTTC-CGGGEEEEESSHHHHH
T ss_pred --------------eehhhcC------------------------CCCCChHHHHHHHHHhCC-ChHHeEEEcCCHHHHH
Confidence 1110000 0011 111223333322 3467999999999999
Q ss_pred HHHHcCccEEE-c-c-cchhhHHHh-CcEeecCccchhhhH
Q 002339 876 MIQEADIGIGI-S-G-VEGMQAVMA-SDFSIAQFRFLERLL 912 (934)
Q Consensus 876 ml~~A~vGIam-~-~-~e~~~a~~~-AD~ii~~~~~l~~ll 912 (934)
|++.|++++++ . + ......+.. ||+++.++..|..++
T Consensus 177 ~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 217 (225)
T 3d6j_A 177 TAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVP 217 (225)
T ss_dssp HHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC---
T ss_pred HHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhh
Confidence 99999999876 2 1 111113444 999999877776653
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.13 E-value=4.5e-06 Score=84.16 Aligned_cols=123 Identities=13% Similarity=0.071 Sum_probs=84.1
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..++.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~------------------------------- 137 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLS------------------------------- 137 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE-------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEee-------------------------------
Confidence 5789999999999999999999999999888888888887542211111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
+.... ...-.|.--..+.+.+.- ....+++|||+.||+.|.
T Consensus 138 ----------------~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~iGD~~~Di~~a 178 (214)
T 3e58_A 138 ----------------GEEFK----------------------ESKPNPEIYLTALKQLNV-QASRALIIEDSEKGIAAG 178 (214)
T ss_dssp ----------------GGGCS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEECSHHHHHHH
T ss_pred ----------------ccccc----------------------CCCCChHHHHHHHHHcCC-ChHHeEEEeccHhhHHHH
Confidence 10000 000011112233444432 446799999999999999
Q ss_pred HHcCccEEEccc--chhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIGIGISGV--EGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGIam~~~--e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|++++.+.+. ... ....||+++.++..|..+
T Consensus 179 ~~aG~~~~~~~~~~~~~-~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 179 VAADVEVWAIRDNEFGM-DQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp HHTTCEEEEECCSSSCC-CCTTSSEEESSGGGGGGG
T ss_pred HHCCCEEEEECCCCccc-hhccHHHHHHHHHHHHhh
Confidence 999998877322 221 347899999998777655
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.12 E-value=1e-05 Score=89.50 Aligned_cols=41 Identities=5% Similarity=0.129 Sum_probs=38.7
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.+.|++++.|+.|+++|++|+|+||.....+.++|.++|+.
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~ 261 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNN 261 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcc
Confidence 47899999999999999999999999999999999999873
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=3.3e-06 Score=89.02 Aligned_cols=62 Identities=15% Similarity=0.261 Sum_probs=47.7
Q ss_pred EEcChh--hHHHHHHHHhhcCCCEEEEEcC----ChhhHHHHHHcC-ccEEEcccchhhHHHhCcEeecC
Q 002339 842 CRVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEAD-IGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 842 ~r~~p~--qK~~iv~~lk~~~~~~v~aiGD----G~ND~~ml~~A~-vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
.++.|. .|+..++.|.......|++||| |.||++||+.|+ +|++|++.... ++..||+++.+
T Consensus 189 leI~~~~vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~-~k~~a~~v~~~ 257 (262)
T 2fue_A 189 FDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT-VQRCREIFFPE 257 (262)
T ss_dssp EEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH-HHHHHHHHCTT
T ss_pred EEEecCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHH-HHHhhheeCCC
Confidence 345554 6998888882214478999999 999999999999 59999654332 88999998764
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.05 E-value=4.1e-06 Score=83.84 Aligned_cols=118 Identities=16% Similarity=0.165 Sum_probs=78.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
.+.+++.+.++.|++.|++++++|+....... ....+|+...-.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~----------------------------------- 128 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT----------------------------------- 128 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE-----------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee-----------------------------------
Confidence 46799999999999999999999999887766 666666532100
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
.++.+.... ...-.|.--..+.+.+.- ....+++|||+.||+.|+
T Consensus 129 ------------~~~~~~~~~----------------------~~Kp~~~~~~~~~~~~~i-~~~~~~~iGD~~nDi~~~ 173 (207)
T 2go7_A 129 ------------EILTSQSGF----------------------VRKPSPEAATYLLDKYQL-NSDNTYYIGDRTLDVEFA 173 (207)
T ss_dssp ------------EEECGGGCC----------------------CCTTSSHHHHHHHHHHTC-CGGGEEEEESSHHHHHHH
T ss_pred ------------eEEecCcCC----------------------CCCCCcHHHHHHHHHhCC-CcccEEEECCCHHHHHHH
Confidence 011110000 000011122244444443 456799999999999999
Q ss_pred HHcCcc-EEEcccchhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIG-IGISGVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vG-Iam~~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|+++ |+|.+.. . .||+++.++..|..+
T Consensus 174 ~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 174 QNSGIQSINFLEST-Y----EGNHRIQALADISRI 203 (207)
T ss_dssp HHHTCEEEESSCCS-C----TTEEECSSTTHHHHH
T ss_pred HHCCCeEEEEecCC-C----CCCEEeCCHHHHHHH
Confidence 999998 6775433 2 699999887777665
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=1.3e-06 Score=90.94 Aligned_cols=50 Identities=22% Similarity=0.355 Sum_probs=41.0
Q ss_pred EEEcChh--hHHHHHHHHhhcCCCEEEEEcC----ChhhHHHHHHcC-ccEEEcccch
Q 002339 841 CCRVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEAD-IGIGISGVEG 891 (934)
Q Consensus 841 ~~r~~p~--qK~~iv~~lk~~~~~~v~aiGD----G~ND~~ml~~A~-vGIam~~~e~ 891 (934)
+.++.|. .|+..++.|.+ ....|+|||| |.||++||+.|+ +|++|++.+.
T Consensus 178 ~leI~~~gv~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~ 234 (246)
T 3f9r_A 178 SFDVFPVGWDKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKD 234 (246)
T ss_dssp EEEEEETTCSGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHH
T ss_pred EEEEEeCCCCHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHH
Confidence 3445554 79999999987 7789999999 799999999996 8999976544
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.03 E-value=8.6e-06 Score=84.66 Aligned_cols=123 Identities=19% Similarity=0.237 Sum_probs=83.5
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-++.+++.++++.|++.|++++++|+.....+..+...+|+...-..
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 159 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--------------------------------- 159 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEE---------------------------------
Confidence 36779999999999999999999999999988889998887532111
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcC--hhhHHHHHHHHhhcCCCEEEEEcCChhhH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVS--PKQKALVTRLVKEGTGKTTLAIGDGANDV 874 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~--p~qK~~iv~~lk~~~~~~v~aiGDG~ND~ 874 (934)
++.+.... ... |.--..+++.+.- ....+++|||+.||+
T Consensus 160 --------------~~~~~~~~------------------------~~Kp~~~~~~~~~~~~~~-~~~~~~~vGD~~~Di 200 (243)
T 2hsz_A 160 --------------MLGGQSLP------------------------EIKPHPAPFYYLCGKFGL-YPKQILFVGDSQNDI 200 (243)
T ss_dssp --------------EECTTTSS------------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEESSHHHH
T ss_pred --------------EEecccCC------------------------CCCcCHHHHHHHHHHhCc-ChhhEEEEcCCHHHH
Confidence 11111000 011 2222334444432 456799999999999
Q ss_pred HHHHHcCccE-EEc-cc--chhhHHHhCcEeecCccchhhh
Q 002339 875 GMIQEADIGI-GIS-GV--EGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 875 ~ml~~A~vGI-am~-~~--e~~~a~~~AD~ii~~~~~l~~l 911 (934)
.|.+.|++++ ++. +. ........||+++.++..|..+
T Consensus 201 ~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~ 241 (243)
T 2hsz_A 201 FAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 241 (243)
T ss_dssp HHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHH
Confidence 9999999985 443 21 1111456799999887776554
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.01 E-value=1.1e-05 Score=81.81 Aligned_cols=47 Identities=6% Similarity=0.001 Sum_probs=38.4
Q ss_pred CCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccch
Q 002339 860 TGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFL 908 (934)
Q Consensus 860 ~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~l 908 (934)
....+++|||+.||+.|++.|+++++|.+... ..+ .||+++.++..+
T Consensus 161 ~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 161 APSESIGLEDSQAGIQAIKDSGALPIGVGRPE-DLG-DDIVIVPDTSHY 207 (221)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEESCHH-HHC-SSSEEESSGGGC
T ss_pred ChhHeEEEeCCHHHHHHHHHCCCEEEEECCHH-Hhc-cccchhcCHHhC
Confidence 34679999999999999999999999965433 255 899999886664
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.00 E-value=1.4e-05 Score=81.90 Aligned_cols=122 Identities=15% Similarity=0.108 Sum_probs=80.2
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..++......
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~------------------------- 156 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTG------------------------- 156 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSS-------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccC-------------------------
Confidence 3568999999999999999999999999888888888888754221111111000
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCC-EEEEEcCChhhHH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGK-TTLAIGDGANDVG 875 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~-~v~aiGDG~ND~~ 875 (934)
...-.|+--..+.+.+.- ... .+++|||+.||+.
T Consensus 157 --------------------------------------------~~Kp~~~~~~~~~~~lgi-~~~~~~v~vGD~~~Di~ 191 (231)
T 3kzx_A 157 --------------------------------------------TIKPSPEPVLAALTNINI-EPSKEVFFIGDSISDIQ 191 (231)
T ss_dssp --------------------------------------------CCTTSSHHHHHHHHHHTC-CCSTTEEEEESSHHHHH
T ss_pred --------------------------------------------CCCCChHHHHHHHHHcCC-CcccCEEEEcCCHHHHH
Confidence 000011111234444443 344 7999999999999
Q ss_pred HHHHcCc-cEEEcccchhhHHHhCcEeecCccchhhhH
Q 002339 876 MIQEADI-GIGISGVEGMQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 876 ml~~A~v-GIam~~~e~~~a~~~AD~ii~~~~~l~~ll 912 (934)
|.+.|++ +|.+++.+. ..+|+++.++..|..+|
T Consensus 192 ~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 192 SAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp HHHHTTCEEEEECC---------CCEEESSHHHHHHHH
T ss_pred HHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHHH
Confidence 9999997 556644332 47889998888776663
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.99 E-value=1.6e-05 Score=81.48 Aligned_cols=42 Identities=19% Similarity=0.174 Sum_probs=37.0
Q ss_pred cCCCchHHHHHHHHhc-CCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQA-GLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
.+.+++.+.++.|++. |+++.++|+.....+..+...+|+..
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~ 135 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 135 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchh
Confidence 4679999999999999 99999999999888888888888753
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.98 E-value=7.7e-06 Score=83.76 Aligned_cols=126 Identities=14% Similarity=0.033 Sum_probs=83.8
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..++
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 143 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLI------------------------------- 143 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEE-------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeE-------------------------------
Confidence 3578999999999999999999999999888888888888753211111
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~m 876 (934)
.+.... ...-.|.--..+.+.+.- ....+++|||+.||+.|
T Consensus 144 ----------------~~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~iGD~~~Di~~ 184 (230)
T 3um9_A 144 ----------------SVDEVR----------------------LFKPHQKVYELAMDTLHL-GESEILFVSCNSWDATG 184 (230)
T ss_dssp ----------------EGGGTT----------------------CCTTCHHHHHHHHHHHTC-CGGGEEEEESCHHHHHH
T ss_pred ----------------ehhhcc----------------------cCCCChHHHHHHHHHhCC-CcccEEEEeCCHHHHHH
Confidence 110000 000011111233333332 44679999999999999
Q ss_pred HHHcCccEEEcc---cchhhHHHhCcEeecCccchhhhH
Q 002339 877 IQEADIGIGISG---VEGMQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 877 l~~A~vGIam~~---~e~~~a~~~AD~ii~~~~~l~~ll 912 (934)
.+.|++++++-. ......+..+|+++.++..|..+|
T Consensus 185 a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (230)
T 3um9_A 185 AKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRF 223 (230)
T ss_dssp HHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTC
T ss_pred HHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHH
Confidence 999999998821 111114568999999988776663
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.98 E-value=6.1e-06 Score=84.74 Aligned_cols=126 Identities=11% Similarity=-0.011 Sum_probs=85.3
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-++.+++.+.++.|++.|++++++|+.....+..+...+|+...-..++.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~------------------------------ 147 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLS------------------------------ 147 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEE------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEE------------------------------
Confidence 35679999999999999999999999999888888888887542211111
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~m 876 (934)
+.... ...-.|.--..+.+.+.- ....+++|||+.||+.|
T Consensus 148 -----------------~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~vGD~~~Di~~ 187 (233)
T 3umb_A 148 -----------------VDAVR----------------------LYKTAPAAYALAPRAFGV-PAAQILFVSSNGWDACG 187 (233)
T ss_dssp -----------------GGGTT----------------------CCTTSHHHHTHHHHHHTS-CGGGEEEEESCHHHHHH
T ss_pred -----------------ecccC----------------------CCCcCHHHHHHHHHHhCC-CcccEEEEeCCHHHHHH
Confidence 10000 000011111233344432 44689999999999999
Q ss_pred HHHcCccEEEc---ccchhhHHHhCcEeecCccchhhhH
Q 002339 877 IQEADIGIGIS---GVEGMQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 877 l~~A~vGIam~---~~e~~~a~~~AD~ii~~~~~l~~ll 912 (934)
.+.|++++++- +......+..||+++.++..|..+|
T Consensus 188 a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 188 ATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp HHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred HHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 99999999882 1111114567999999988887774
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.98 E-value=9.1e-06 Score=83.14 Aligned_cols=125 Identities=19% Similarity=0.195 Sum_probs=84.0
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-++.|++.++++.|++.|++++++|+.....+..+...+|+...-..+
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i-------------------------------- 129 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLI-------------------------------- 129 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEE--------------------------------
Confidence 357899999999999999999999999988888888888874321111
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~m 876 (934)
+.+.... ...-.|.--..+++.+.- ....+++|||+.||+.|
T Consensus 130 ---------------~~~~~~~----------------------~~Kp~~~~~~~~~~~~~~-~~~~~~~vGD~~~Di~~ 171 (222)
T 2nyv_A 130 ---------------VGGDTFG----------------------EKKPSPTPVLKTLEILGE-EPEKALIVGDTDADIEA 171 (222)
T ss_dssp ---------------ECTTSSC----------------------TTCCTTHHHHHHHHHHTC-CGGGEEEEESSHHHHHH
T ss_pred ---------------EecCcCC----------------------CCCCChHHHHHHHHHhCC-CchhEEEECCCHHHHHH
Confidence 1111000 000112222334444432 45679999999999999
Q ss_pred HHHcCcc-EEEc-ccchhhHHHhCcEeecCccchhhhH
Q 002339 877 IQEADIG-IGIS-GVEGMQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 877 l~~A~vG-Iam~-~~e~~~a~~~AD~ii~~~~~l~~ll 912 (934)
.+.|+++ |++. +...... ..+|+++.++..|..++
T Consensus 172 a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 172 GKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp HHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred HHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 9999998 6773 3211112 57899999888776664
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=1.3e-05 Score=85.31 Aligned_cols=125 Identities=13% Similarity=0.056 Sum_probs=83.5
Q ss_pred cCCCchHHHHHHHHhcCC--eEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGL--KIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGI--kv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (934)
++.+++.++++.|++.|+ +++++|+.....+..+...+|+...-..++..+....
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~----------------------- 198 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRT----------------------- 198 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSC-----------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCC-----------------------
Confidence 567899999999999999 9999999998888888888887542211111000000
Q ss_pred hhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc---CC-CEEEEEcCCh
Q 002339 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TG-KTTLAIGDGA 871 (934)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~---~~-~~v~aiGDG~ 871 (934)
.. ..++-|..+++.+.+. .. ..+++|||+.
T Consensus 199 --------------------------------------------~~--~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~ 232 (282)
T 3nuq_A 199 --------------------------------------------DT--LVCKPHVKAFEKAMKESGLARYENAYFIDDSG 232 (282)
T ss_dssp --------------------------------------------SS--CCCTTSHHHHHHHHHHHTCCCGGGEEEEESCH
T ss_pred --------------------------------------------cc--cCCCcCHHHHHHHHHHcCCCCcccEEEEcCCH
Confidence 00 1122233333333221 34 6899999999
Q ss_pred hhHHHHHHcCccEEEccc-chh----hHHHhCcEeecCccchhhh
Q 002339 872 NDVGMIQEADIGIGISGV-EGM----QAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 872 ND~~ml~~A~vGIam~~~-e~~----~a~~~AD~ii~~~~~l~~l 911 (934)
||+.|.+.|++|++|... +.. .....||+++.++..|..+
T Consensus 233 ~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 233 KNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp HHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred HHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 999999999998877432 211 0134789999998887766
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.96 E-value=1.4e-05 Score=84.16 Aligned_cols=41 Identities=27% Similarity=0.255 Sum_probs=34.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.+.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~ 143 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 143 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence 46799999999999999999999999887777776666553
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.96 E-value=1.4e-05 Score=84.47 Aligned_cols=42 Identities=24% Similarity=0.142 Sum_probs=36.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
.+.+++.+.++.|++.|+++.++|+.....+..+...+|+..
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~ 152 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQG 152 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCccc
Confidence 567999999999999999999999999888888777777643
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.95 E-value=3.8e-07 Score=95.26 Aligned_cols=59 Identities=24% Similarity=0.313 Sum_probs=44.0
Q ss_pred EEcChh--hHHHHHHHHhhcCCCEEEEEcC----ChhhHHHHHHcCc-cEEEcccchhhHHHhCcEe
Q 002339 842 CRVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEADI-GIGISGVEGMQAVMASDFS 901 (934)
Q Consensus 842 ~r~~p~--qK~~iv~~lk~~~~~~v~aiGD----G~ND~~ml~~A~v-GIam~~~e~~~a~~~AD~i 901 (934)
.++.|. .|+..++.+.......|++||| |.||++||+.|+. |++|++.... +|..||||
T Consensus 180 leI~~~~~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~-vk~~A~~v 245 (246)
T 2amy_A 180 FDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDT-RRICELLF 245 (246)
T ss_dssp EEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHH-HHHHHHHC
T ss_pred EEEecCCCchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHH-HHHHHhhc
Confidence 345554 6988888872114578999999 9999999999987 9999765433 89999986
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.90 E-value=9.6e-06 Score=79.82 Aligned_cols=54 Identities=13% Similarity=0.075 Sum_probs=38.9
Q ss_pred CCCEEEEEcCChhhHHHHHHcCcc-EEEc-ccchhhHH----HhCcEeecCccchhhhHh
Q 002339 860 TGKTTLAIGDGANDVGMIQEADIG-IGIS-GVEGMQAV----MASDFSIAQFRFLERLLV 913 (934)
Q Consensus 860 ~~~~v~aiGDG~ND~~ml~~A~vG-Iam~-~~e~~~a~----~~AD~ii~~~~~l~~lll 913 (934)
....+++|||+.||+.|.+.|++. |++. |....... ..+|+++.++..|..+|+
T Consensus 117 ~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 117 DLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp CCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 457799999999999999999973 3442 32221122 457999999888777744
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.89 E-value=1.6e-05 Score=82.18 Aligned_cols=137 Identities=12% Similarity=0.168 Sum_probs=88.0
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-++.|++.++|+.|+++|++++++|+.....+..+.. |+... ..++......
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~------------------------- 127 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASF------------------------- 127 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEEC-------------------------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEE-------------------------
Confidence 3678999999999999999999999999888888776 66443 2333211100
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~m 876 (934)
.+..+..... .-....+.+.....|..+++.+.. ....+++|||+.+|+.|
T Consensus 128 ----------------~~~~~~~~~~------------kp~p~~~~~~~~~~K~~~~~~~~~-~~~~~~~vGDs~~Di~~ 178 (236)
T 2fea_A 128 ----------------DNDYIHIDWP------------HSCKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGDSVTDVEA 178 (236)
T ss_dssp ----------------SSSBCEEECT------------TCCCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEECCGGGHHH
T ss_pred ----------------cCCceEEecC------------CCCccccccccCCcHHHHHHHHhc-cCCeEEEEeCChHHHHH
Confidence 0000000000 000000111134578888888865 67899999999999999
Q ss_pred HHHcCccEEEcccchhhHHHh--CcEeecCccchhhh
Q 002339 877 IQEADIGIGISGVEGMQAVMA--SDFSIAQFRFLERL 911 (934)
Q Consensus 877 l~~A~vGIam~~~e~~~a~~~--AD~ii~~~~~l~~l 911 (934)
.+.|++.++..+.. ...... +|+++.++..|..+
T Consensus 179 a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~ 214 (236)
T 2fea_A 179 AKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKE 214 (236)
T ss_dssp HHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHH
T ss_pred HHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHH
Confidence 99999988653322 113333 88999887777665
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.4e-05 Score=81.98 Aligned_cols=122 Identities=14% Similarity=0.082 Sum_probs=79.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCC---HHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK---METAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNA 794 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~---~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (934)
.+.+++.+.++.|++.|++++++|+.. ...+......+|+...-..++
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~----------------------------- 149 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTF----------------------------- 149 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEE-----------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhhe-----------------------------
Confidence 357999999999999999999999998 777777777777643211111
Q ss_pred HhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcCh--hhHHHHHHHHhhcCCCEEEEEcCCh-
Q 002339 795 SQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEGTGKTTLAIGDGA- 871 (934)
Q Consensus 795 ~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~lk~~~~~~v~aiGDG~- 871 (934)
.+.... ...| .--..+.+.+.- ....+++|||+.
T Consensus 150 ------------------~~~~~~------------------------~~kp~~~~~~~~~~~lgi-~~~~~~~iGD~~~ 186 (235)
T 2om6_A 150 ------------------FADEVL------------------------SYKPRKEMFEKVLNSFEV-KPEESLHIGDTYA 186 (235)
T ss_dssp ------------------EHHHHT------------------------CCTTCHHHHHHHHHHTTC-CGGGEEEEESCTT
T ss_pred ------------------eccccC------------------------CCCCCHHHHHHHHHHcCC-CccceEEECCChH
Confidence 100000 0011 111122333322 346899999999
Q ss_pred hhHHHHHHcCccEEEc--ccchhhHHHhCcEeecCccchhhh
Q 002339 872 NDVGMIQEADIGIGIS--GVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 872 ND~~ml~~A~vGIam~--~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
||+.|.+.|++++++- +......+..+|+++.++..|..+
T Consensus 187 nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 228 (235)
T 2om6_A 187 EDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDV 228 (235)
T ss_dssp TTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred HHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHH
Confidence 9999999999999882 221111345689999888777665
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=1e-05 Score=81.66 Aligned_cols=120 Identities=15% Similarity=0.211 Sum_probs=79.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.+.++.|++. ++++++|+.....+..+.+.+|+...-.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~----------------------------------- 126 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA----------------------------------- 126 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE-----------------------------------
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc-----------------------------------
Confidence 5689999999999999 9999999999888888888887743100
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcC--hhhHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVS--PKQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~--p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
.++.+.... ..- |.--..+.+.+.- ....+++|||+.||+.
T Consensus 127 ------------~~~~~~~~~------------------------~~KP~~~~~~~~~~~~~~-~~~~~i~vGD~~~Di~ 169 (209)
T 2hdo_A 127 ------------VTISADDTP------------------------KRKPDPLPLLTALEKVNV-APQNALFIGDSVSDEQ 169 (209)
T ss_dssp ------------EEECGGGSS------------------------CCTTSSHHHHHHHHHTTC-CGGGEEEEESSHHHHH
T ss_pred ------------EEEecCcCC------------------------CCCCCcHHHHHHHHHcCC-CcccEEEECCChhhHH
Confidence 111111000 011 1111233333332 3468999999999999
Q ss_pred HHHHcCccEEEc--ccc-hhhHHHhCcEeecCccchhhh
Q 002339 876 MIQEADIGIGIS--GVE-GMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 876 ml~~A~vGIam~--~~e-~~~a~~~AD~ii~~~~~l~~l 911 (934)
|.+.|++++++. +.. ....+. ||+++.++..|..+
T Consensus 170 ~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el~~~ 207 (209)
T 2hdo_A 170 TAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDILEL 207 (209)
T ss_dssp HHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGGGGG
T ss_pred HHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHHHHh
Confidence 999999999873 221 111334 99999887776654
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.84 E-value=1.8e-05 Score=82.87 Aligned_cols=127 Identities=11% Similarity=0.036 Sum_probs=82.0
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 155 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGE--------------------------------- 155 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCS---------------------------------
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccc---------------------------------
Confidence 45679999999999999999999999999888888888876321000
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChh--hHHHHHHHHhhcCCCEEEEEcCChhhH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK--QKALVTRLVKEGTGKTTLAIGDGANDV 874 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~--qK~~iv~~lk~~~~~~v~aiGDG~ND~ 874 (934)
.++.+.... . ...|. --..+.+.+.- ....+++|||+.||+
T Consensus 156 -------------~i~~~~~~~---------------------~--~~Kp~~~~~~~~~~~lgi-~~~~~i~iGD~~~Di 198 (259)
T 4eek_A 156 -------------HIYDPSWVG---------------------G--RGKPHPDLYTFAAQQLGI-LPERCVVIEDSVTGG 198 (259)
T ss_dssp -------------CEECGGGGT---------------------T--CCTTSSHHHHHHHHHTTC-CGGGEEEEESSHHHH
T ss_pred -------------eEEeHhhcC---------------------c--CCCCChHHHHHHHHHcCC-CHHHEEEEcCCHHHH
Confidence 001110000 0 01111 11223333322 346799999999999
Q ss_pred HHHHHcCccE-EEc-ccc-----hhhHH-HhCcEeecCccchhhhHh
Q 002339 875 GMIQEADIGI-GIS-GVE-----GMQAV-MASDFSIAQFRFLERLLV 913 (934)
Q Consensus 875 ~ml~~A~vGI-am~-~~e-----~~~a~-~~AD~ii~~~~~l~~lll 913 (934)
.|.+.|+++. ++. |.. ..... ..||+++.++..|..+|-
T Consensus 199 ~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~ 245 (259)
T 4eek_A 199 AAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALA 245 (259)
T ss_dssp HHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHH
T ss_pred HHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHH
Confidence 9999999984 553 311 11133 459999999888887753
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.6e-05 Score=82.87 Aligned_cols=51 Identities=12% Similarity=0.185 Sum_probs=39.5
Q ss_pred CEEEEEcCChhhHHHHHHcCccEEE---cccchhhHHHhCcEeecCccchhhhHh
Q 002339 862 KTTLAIGDGANDVGMIQEADIGIGI---SGVEGMQAVMASDFSIAQFRFLERLLV 913 (934)
Q Consensus 862 ~~v~aiGDG~ND~~ml~~A~vGIam---~~~e~~~a~~~AD~ii~~~~~l~~lll 913 (934)
..+++|||+.||+.|.+.|++.+.+ ++.. ...+..||+++.++..|..+|+
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~-~~~~~~ad~v~~sl~el~~~l~ 244 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLS-RDLTTKATLVLNSLQDFQPELF 244 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSC-GGGSTTSSEECSCGGGCCGGGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCc-hhhcccccEeecCHHHhhHHHh
Confidence 7899999999999999999965533 3322 2267889999999888766643
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.82 E-value=2e-05 Score=80.82 Aligned_cols=124 Identities=12% Similarity=0.066 Sum_probs=81.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..++
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~-------------------------------- 142 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLL-------------------------------- 142 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEE--------------------------------
Confidence 577999999999999999999999999888888888888753221111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
.+.... ...-.|.--..+.+.+.- ....+++|||+.||+.|.
T Consensus 143 ---------------~~~~~~----------------------~~Kp~~~~~~~~~~~~~~-~~~~~~~iGD~~~Di~~a 184 (232)
T 1zrn_A 143 ---------------SVDPVQ----------------------VYKPDNRVYELAEQALGL-DRSAILFVASNAWDATGA 184 (232)
T ss_dssp ---------------ESGGGT----------------------CCTTSHHHHHHHHHHHTS-CGGGEEEEESCHHHHHHH
T ss_pred ---------------EecccC----------------------CCCCCHHHHHHHHHHcCC-CcccEEEEeCCHHHHHHH
Confidence 110000 000111112233344432 346799999999999999
Q ss_pred HHcCccEEEc--c-cchhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIGIGIS--G-VEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGIam~--~-~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|++++.+- + ......+..+|+++.++..|..+
T Consensus 185 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 221 (232)
T 1zrn_A 185 RYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 221 (232)
T ss_dssp HHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred HHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHH
Confidence 9999998772 2 11111345689999887766555
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.80 E-value=4.1e-05 Score=78.69 Aligned_cols=120 Identities=16% Similarity=0.137 Sum_probs=81.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
.+.+++.+.++.|+ .|++++++|+.....+......+|+...-..++.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~------------------------------- 154 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIIL------------------------------- 154 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEE-------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEE-------------------------------
Confidence 56799999999999 9999999999988888888777777532211111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCCh-hh
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGA-ND 873 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~---~~~~v~aiGDG~-ND 873 (934)
+... ...+-|..+++.+.+. ....+++|||+. ||
T Consensus 155 ----------------~~~~--------------------------~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~D 192 (240)
T 3qnm_A 155 ----------------SEDL--------------------------GVLKPRPEIFHFALSATQSELRESLMIGDSWEAD 192 (240)
T ss_dssp ----------------GGGT--------------------------TCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTT
T ss_pred ----------------eccC--------------------------CCCCCCHHHHHHHHHHcCCCcccEEEECCCchHh
Confidence 0000 0011122333332222 346899999995 99
Q ss_pred HHHHHHcCccEEEcccch-hhHHHhCcEeecCccchhhh
Q 002339 874 VGMIQEADIGIGISGVEG-MQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 874 ~~ml~~A~vGIam~~~e~-~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|.+.|++++++.+... ......+|+++.++..+..+
T Consensus 193 i~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~ 231 (240)
T 3qnm_A 193 ITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL 231 (240)
T ss_dssp HHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH
T ss_pred HHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH
Confidence 999999999998843222 11456799999998887766
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.79 E-value=4e-05 Score=78.25 Aligned_cols=116 Identities=15% Similarity=-0.006 Sum_probs=79.3
Q ss_pred cCCCchHHHHHHHHhcC-CeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 718 KLQKGVPQCIDKLAQAG-LKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aG-Ikv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
++.+++.+.++.|++.| +++.++|+.....+..+...+|+...-..
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~--------------------------------- 151 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDH--------------------------------- 151 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSE---------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhhe---------------------------------
Confidence 56799999999999999 99999999888777777777776432111
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCCh-h
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGA-N 872 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~---~~~~v~aiGDG~-N 872 (934)
+++...| |...++.+.+. ....+++|||+. |
T Consensus 152 -------------------------------------------~~~~~kp--k~~~~~~~~~~lgi~~~~~i~iGD~~~~ 186 (234)
T 3ddh_A 152 -------------------------------------------IEVMSDK--TEKEYLRLLSILQIAPSELLMVGNSFKS 186 (234)
T ss_dssp -------------------------------------------EEEESCC--SHHHHHHHHHHHTCCGGGEEEEESCCCC
T ss_pred -------------------------------------------eeecCCC--CHHHHHHHHHHhCCCcceEEEECCCcHH
Confidence 2222222 44334433322 346899999996 9
Q ss_pred hHHHHHHcCccEEEc--c----cchhhHHH-hCcEeecCccchhhh
Q 002339 873 DVGMIQEADIGIGIS--G----VEGMQAVM-ASDFSIAQFRFLERL 911 (934)
Q Consensus 873 D~~ml~~A~vGIam~--~----~e~~~a~~-~AD~ii~~~~~l~~l 911 (934)
|+.|.+.|++++++- + ........ .+|+++.++..|..+
T Consensus 187 Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 187 DIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp CCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred HhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 999999999998772 1 11111133 349999988777654
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.79 E-value=4.9e-05 Score=76.88 Aligned_cols=118 Identities=14% Similarity=0.091 Sum_probs=79.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.+.++.|++ |+++.++|+.....+..+.+.+|+...-..
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~---------------------------------- 128 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDG---------------------------------- 128 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheee----------------------------------
Confidence 467999999999999 999999999888878887788887542211
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcC---CCEEEEEcCChhhH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT---GKTTLAIGDGANDV 874 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~---~~~v~aiGDG~ND~ 874 (934)
++++...++-|..++..+.+.. ...+++|||+.||+
T Consensus 129 -----------------------------------------i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di 167 (210)
T 2ah5_A 129 -----------------------------------------IYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDM 167 (210)
T ss_dssp -----------------------------------------EEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred -----------------------------------------eecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHHHH
Confidence 1222211223444444433323 35799999999999
Q ss_pred HHHHHcCc---cEEEcccchhhHH-HhCcEeecCccchhhh
Q 002339 875 GMIQEADI---GIGISGVEGMQAV-MASDFSIAQFRFLERL 911 (934)
Q Consensus 875 ~ml~~A~v---GIam~~~e~~~a~-~~AD~ii~~~~~l~~l 911 (934)
.|.+.|++ +|+++.......+ ..+|+++.++..|..+
T Consensus 168 ~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 168 LGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp HHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred HHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 99999998 3433322121133 3589999887766544
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=4.1e-05 Score=79.08 Aligned_cols=125 Identities=14% Similarity=0.075 Sum_probs=81.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.+.++.|++.|++++++|+.....+..+...+|+...-..++.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~------------------------------- 153 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLS------------------------------- 153 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE-------------------------------
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEE-------------------------------
Confidence 5779999999999999999999999999888888888887542211111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
+.... ...-.|.--..+.+.+.- ....+++|||+.||+.|.
T Consensus 154 ----------------~~~~~----------------------~~Kp~~~~~~~~~~~~~~-~~~~~~~iGD~~~Di~~a 194 (240)
T 2no4_A 154 ----------------ADDLK----------------------IYKPDPRIYQFACDRLGV-NPNEVCFVSSNAWDLGGA 194 (240)
T ss_dssp ----------------GGGTT----------------------CCTTSHHHHHHHHHHHTC-CGGGEEEEESCHHHHHHH
T ss_pred ----------------ccccC----------------------CCCCCHHHHHHHHHHcCC-CcccEEEEeCCHHHHHHH
Confidence 10000 000011112233333332 346799999999999999
Q ss_pred HHcCccEEE-c-ccchhhHHHhC-cEeecCccchhhhH
Q 002339 878 QEADIGIGI-S-GVEGMQAVMAS-DFSIAQFRFLERLL 912 (934)
Q Consensus 878 ~~A~vGIam-~-~~e~~~a~~~A-D~ii~~~~~l~~ll 912 (934)
+.|++.+.. . +.........+ |+++.++..|..+|
T Consensus 195 ~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l 232 (240)
T 2no4_A 195 GKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLL 232 (240)
T ss_dssp HHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHHH
T ss_pred HHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHHHHH
Confidence 999977643 2 22111134457 99998887776653
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.79 E-value=7.2e-05 Score=77.30 Aligned_cols=123 Identities=14% Similarity=0.110 Sum_probs=80.7
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..++
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~-------------------------------- 141 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVI-------------------------------- 141 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEE--------------------------------
Confidence 467999999999999999999999998888888888888753211111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcCh--hhHHHHHHHHhhcCCCEEEEEcCCh-hhH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEGTGKTTLAIGDGA-NDV 874 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~lk~~~~~~v~aiGDG~-ND~ 874 (934)
.+.... ...| .-=..+.+.+.- ....+++|||+. ||+
T Consensus 142 ---------------~~~~~~------------------------~~Kp~~~~~~~~~~~~g~-~~~~~i~iGD~~~~Di 181 (241)
T 2hoq_A 142 ---------------ISDFEG------------------------VKKPHPKIFKKALKAFNV-KPEEALMVGDRLYSDI 181 (241)
T ss_dssp ---------------EGGGGT------------------------CCTTCHHHHHHHHHHHTC-CGGGEEEEESCTTTTH
T ss_pred ---------------EeCCCC------------------------CCCCCHHHHHHHHHHcCC-CcccEEEECCCchHhH
Confidence 110000 0011 111222333332 346799999998 999
Q ss_pred HHHHHcCccEEE-c-ccchhhHHH---hCcEeecCccchhhhH
Q 002339 875 GMIQEADIGIGI-S-GVEGMQAVM---ASDFSIAQFRFLERLL 912 (934)
Q Consensus 875 ~ml~~A~vGIam-~-~~e~~~a~~---~AD~ii~~~~~l~~ll 912 (934)
.|.+.|++++.. . |........ .+|+++.++..|..++
T Consensus 182 ~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l 224 (241)
T 2hoq_A 182 YGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVL 224 (241)
T ss_dssp HHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHH
T ss_pred HHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHHHHH
Confidence 999999998644 2 322211332 6999999887776663
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.77 E-value=8.4e-05 Score=76.24 Aligned_cols=121 Identities=18% Similarity=0.134 Sum_probs=81.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
.+.+++.+.++.|++. +++.++|+.....+......+|+...-..++
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~-------------------------------- 149 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIF-------------------------------- 149 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEE--------------------------------
Confidence 5779999999999999 9999999999888888888888753221111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCC----CEEEEEcCCh-h
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG----KTTLAIGDGA-N 872 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~----~~v~aiGDG~-N 872 (934)
.+... -..+-|..+++.+.+..| ..+++|||+. |
T Consensus 150 ---------------~~~~~--------------------------~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~ 188 (238)
T 3ed5_A 150 ---------------VSEDT--------------------------GFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTA 188 (238)
T ss_dssp ---------------EGGGT--------------------------TSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTT
T ss_pred ---------------Eeccc--------------------------CCCCCChHHHHHHHHHcCCCChhHeEEECCCcHH
Confidence 10000 001112333333322233 5799999998 9
Q ss_pred hHHHHHHcCccE-EEc-ccchhhHHHhCcEeecCccchhhhH
Q 002339 873 DVGMIQEADIGI-GIS-GVEGMQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 873 D~~ml~~A~vGI-am~-~~e~~~a~~~AD~ii~~~~~l~~ll 912 (934)
|+.|.+.||++. .+. +......+..||+++.++..|..+|
T Consensus 189 Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 189 DIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp THHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred HHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 999999999965 453 3212225668999999998888774
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.76 E-value=9.4e-05 Score=78.93 Aligned_cols=67 Identities=19% Similarity=0.172 Sum_probs=49.9
Q ss_pred EEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccc
Q 002339 840 ICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF 907 (934)
Q Consensus 840 i~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~ 907 (934)
.+....|. .|...++.+.+..| ..+++|||+.||++|++.|++|++|++.... .+..||+++.+...
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~-~~~~a~~v~~~~~~ 272 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQE-AKNLHNLITDSEYS 272 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHH-HHHHCCCBCSSCHH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHH-HHHhCCEEcCCCCc
Confidence 44555553 67777776655433 5799999999999999999999999654332 78889999876443
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.75 E-value=3.2e-05 Score=79.32 Aligned_cols=123 Identities=15% Similarity=0.189 Sum_probs=81.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
.+.+++.+.++.|++. +++.++|+.....+..+...+|+...-..++
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~-------------------------------- 146 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSIT-------------------------------- 146 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeE--------------------------------
Confidence 4669999999999999 9999999999988888888888753211111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCh-hhHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGA-NDVGM 876 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~-ND~~m 876 (934)
.+.... ...-.|.--..+.+.+.- ....+++|||+. ||+.|
T Consensus 147 ---------------~~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~vGD~~~~Di~~ 188 (234)
T 3u26_A 147 ---------------TSEEAG----------------------FFKPHPRIFELALKKAGV-KGEEAVYVGDNPVKDCGG 188 (234)
T ss_dssp ---------------EHHHHT----------------------BCTTSHHHHHHHHHHHTC-CGGGEEEEESCTTTTHHH
T ss_pred ---------------eccccC----------------------CCCcCHHHHHHHHHHcCC-CchhEEEEcCCcHHHHHH
Confidence 100000 000011111233333432 446899999997 99999
Q ss_pred HHHcCcc---EEEcccchhhHHHhCcEeecCccchhhhH
Q 002339 877 IQEADIG---IGISGVEGMQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 877 l~~A~vG---Iam~~~e~~~a~~~AD~ii~~~~~l~~ll 912 (934)
.+.|++. |++++... ..+..||+++.++..|..+|
T Consensus 189 a~~aG~~~~~v~~~~~~~-~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 189 SKNLGMTSILLDRKGEKR-EFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp HHTTTCEEEEECSSSTTG-GGGGGCSEEESSTHHHHHHH
T ss_pred HHHcCCEEEEECCCCCcc-ccccCCCEeeCCHHHHHHHH
Confidence 9999964 44433222 25668999999988877664
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.71 E-value=6.2e-05 Score=77.83 Aligned_cols=117 Identities=14% Similarity=0.095 Sum_probs=77.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.+.++.|+++|+++.++|+.....+..+...+|+. .-..+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~--------------------------------- 155 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFA--------------------------------- 155 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEE---------------------------------
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEE---------------------------------
Confidence 35699999999999999999999998887777777777763 21111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcCh--hhHH----HHHHHHhhcCCCEEEEEcCCh
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKA----LVTRLVKEGTGKTTLAIGDGA 871 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~----~iv~~lk~~~~~~v~aiGDG~ 871 (934)
+.+...+ +-|. .+.+.+.- ....+++|||+.
T Consensus 156 ------------------------------------------~~~~~~~~~Kp~p~~~~~~~~~l~~-~~~~~~~vGDs~ 192 (240)
T 2hi0_A 156 ------------------------------------------LGEKSGIRRKPAPDMTSECVKVLGV-PRDKCVYIGDSE 192 (240)
T ss_dssp ------------------------------------------EEECTTSCCTTSSHHHHHHHHHHTC-CGGGEEEEESSH
T ss_pred ------------------------------------------EecCCCCCCCCCHHHHHHHHHHcCC-CHHHeEEEcCCH
Confidence 1111111 1122 22333332 346899999999
Q ss_pred hhHHHHHHcCcc-EEEc-cc-chhhHH-HhCcEeecCccchhhh
Q 002339 872 NDVGMIQEADIG-IGIS-GV-EGMQAV-MASDFSIAQFRFLERL 911 (934)
Q Consensus 872 ND~~ml~~A~vG-Iam~-~~-e~~~a~-~~AD~ii~~~~~l~~l 911 (934)
||+.|.+.|++. |++. +. .....+ ..||+++.++..|..+
T Consensus 193 ~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~~ 236 (240)
T 2hi0_A 193 IDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEEA 236 (240)
T ss_dssp HHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHHHH
T ss_pred HHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHHHH
Confidence 999999999994 4553 22 212133 3699999887666554
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.70 E-value=3.8e-05 Score=79.48 Aligned_cols=125 Identities=11% Similarity=0.052 Sum_probs=75.8
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCC--ceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHH
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQG--MKQICITALNSDSVGKAAKEAVKDNILMQITNA 794 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (934)
.++.+++.+.++.|++.|++++++|+.....+...... |+...- ..
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~------------------------------- 154 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANL------------------------------- 154 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGG-------------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCe-------------------------------
Confidence 46789999999999999999999999877665555555 553211 00
Q ss_pred HhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhH
Q 002339 795 SQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDV 874 (934)
Q Consensus 795 ~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~ 874 (934)
++.+.... ...-.|.--..+.+.+.- ....+++|||+.||+
T Consensus 155 ----------------~~~~~~~~----------------------~~kp~~~~~~~~~~~lg~-~~~~~i~vGD~~~Di 195 (247)
T 3dv9_A 155 ----------------MVTAFDVK----------------------YGKPNPEPYLMALKKGGF-KPNEALVIENAPLGV 195 (247)
T ss_dssp ----------------EECGGGCS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEECSHHHH
T ss_pred ----------------EEecccCC----------------------CCCCCCHHHHHHHHHcCC-ChhheEEEeCCHHHH
Confidence 11111000 000011111233444432 446799999999999
Q ss_pred HHHHHcCccE-EEc-ccch-hhH-HHhCcEeecCccchhhhH
Q 002339 875 GMIQEADIGI-GIS-GVEG-MQA-VMASDFSIAQFRFLERLL 912 (934)
Q Consensus 875 ~ml~~A~vGI-am~-~~e~-~~a-~~~AD~ii~~~~~l~~ll 912 (934)
.|.+.|+++. ++. +... ... ...||+++.++..|..+|
T Consensus 196 ~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 196 QAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNW 237 (247)
T ss_dssp HHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHH
T ss_pred HHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 9999999864 553 3222 111 237999999987766653
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.68 E-value=3.5e-05 Score=79.79 Aligned_cols=124 Identities=12% Similarity=0.066 Sum_probs=76.3
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCC--ceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHH
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQG--MKQICITALNSDSVGKAAKEAVKDNILMQITNA 794 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (934)
-++.+++.+.++.|++.|+++.++|+.....+...... |+...- ..
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~------------------------------- 155 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKEL------------------------------- 155 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGG-------------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcce-------------------------------
Confidence 35789999999999999999999999887666555554 553211 00
Q ss_pred HhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhH
Q 002339 795 SQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDV 874 (934)
Q Consensus 795 ~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~ 874 (934)
++.+.... ...-.|.--..+.+.+.- ....+++|||+.||+
T Consensus 156 ----------------i~~~~~~~----------------------~~kp~~~~~~~~~~~lg~-~~~~~i~vGD~~~Di 196 (243)
T 3qxg_A 156 ----------------MVTAFDVK----------------------YGKPNPEPYLMALKKGGL-KADEAVVIENAPLGV 196 (243)
T ss_dssp ----------------EECTTTCS----------------------SCTTSSHHHHHHHHHTTC-CGGGEEEEECSHHHH
T ss_pred ----------------EEeHHhCC----------------------CCCCChHHHHHHHHHcCC-CHHHeEEEeCCHHHH
Confidence 11111000 000011111223333332 346799999999999
Q ss_pred HHHHHcCccE-EEc-ccch-hh-HHHhCcEeecCccchhhh
Q 002339 875 GMIQEADIGI-GIS-GVEG-MQ-AVMASDFSIAQFRFLERL 911 (934)
Q Consensus 875 ~ml~~A~vGI-am~-~~e~-~~-a~~~AD~ii~~~~~l~~l 911 (934)
.|.+.|+++. ++. +... .. ....||+++.++..|..+
T Consensus 197 ~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~ 237 (243)
T 3qxg_A 197 EAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDS 237 (243)
T ss_dssp HHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHH
T ss_pred HHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 9999999955 553 3222 11 123699999988777655
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.61 E-value=8.5e-05 Score=77.42 Aligned_cols=123 Identities=20% Similarity=0.173 Sum_probs=81.7
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.++++.|+ |+++.++|+.....+..+...+|+...-..++.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~------------------------------- 139 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVIS------------------------------- 139 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE-------------------------------
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEE-------------------------------
Confidence 67899999999998 999999999999888888888887542211111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
+.... ...-.|.--..+.+.+.- ....+++|||+.||+.|.
T Consensus 140 ----------------~~~~~----------------------~~Kp~~~~~~~~~~~~~~-~~~~~~~vGD~~~Di~~a 180 (253)
T 1qq5_A 140 ----------------VDAKR----------------------VFKPHPDSYALVEEVLGV-TPAEVLFVSSNGFDVGGA 180 (253)
T ss_dssp ----------------GGGGT----------------------CCTTSHHHHHHHHHHHCC-CGGGEEEEESCHHHHHHH
T ss_pred ----------------ccccC----------------------CCCCCHHHHHHHHHHcCC-CHHHEEEEeCChhhHHHH
Confidence 00000 000111112233333332 346799999999999999
Q ss_pred HHcCccEEEccc-----------------------c---hhhHHHhCcEeecCccchhhhH
Q 002339 878 QEADIGIGISGV-----------------------E---GMQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 878 ~~A~vGIam~~~-----------------------e---~~~a~~~AD~ii~~~~~l~~ll 912 (934)
+.|++++.+.+. . ....+..+|+++.++..|..+|
T Consensus 181 ~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 241 (253)
T 1qq5_A 181 KNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (253)
T ss_dssp HHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred HHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHH
Confidence 999999877433 0 0113456899999988877764
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00015 Score=73.33 Aligned_cols=52 Identities=19% Similarity=0.282 Sum_probs=38.2
Q ss_pred CCCEEEEEcCChhhHHHHHHcCcc--EEEc-ccc-hhhHHHhCcEeecCccchhhh
Q 002339 860 TGKTTLAIGDGANDVGMIQEADIG--IGIS-GVE-GMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 860 ~~~~v~aiGDG~ND~~ml~~A~vG--Iam~-~~e-~~~a~~~AD~ii~~~~~l~~l 911 (934)
....+++|||+.||+.|.+.|++. |++. +.. .......+|+++.++..|..+
T Consensus 147 ~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~ 202 (211)
T 2gmw_A 147 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 202 (211)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred CHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHH
Confidence 346799999999999999999975 5552 321 111334699999988877766
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.57 E-value=5.5e-05 Score=78.45 Aligned_cols=123 Identities=8% Similarity=-0.029 Sum_probs=82.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.++++.|++. +++.++|+.....+..+...+|+.- + .
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f-~-------~---------------------------- 158 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW-D-------V---------------------------- 158 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC-S-------C----------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe-e-------E----------------------------
Confidence 5679999999999997 9999999999888888888887731 0 0
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCChhhH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDV 874 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~---~~~~v~aiGDG~ND~ 874 (934)
++.+... ...+-|..+++.+.+. ....+++|||+.||+
T Consensus 159 -------------~~~~~~~--------------------------~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di 199 (254)
T 3umg_A 159 -------------IIGSDIN--------------------------RKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDL 199 (254)
T ss_dssp -------------CCCHHHH--------------------------TCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHH
T ss_pred -------------EEEcCcC--------------------------CCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhH
Confidence 0000000 0011122233333222 336899999999999
Q ss_pred HHHHHcCccEEEcccchh-------h--HHHhCcEeecCccchhhhHhhhc
Q 002339 875 GMIQEADIGIGISGVEGM-------Q--AVMASDFSIAQFRFLERLLVVHG 916 (934)
Q Consensus 875 ~ml~~A~vGIam~~~e~~-------~--a~~~AD~ii~~~~~l~~lll~~G 916 (934)
.|.+.|+++++|.+.... . .+..+|+++.++..|..+|..++
T Consensus 200 ~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~~~ 250 (254)
T 3umg_A 200 EAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRAGS 250 (254)
T ss_dssp HHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHHCC
T ss_pred HHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcCCC
Confidence 999999999988542110 0 24678999999988888754443
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00019 Score=73.07 Aligned_cols=52 Identities=15% Similarity=0.256 Sum_probs=40.0
Q ss_pred CCCEEEEEcCChhhHHHHHHcCcc-EEEcccch------hhHHHh-CcEeecCccchhhh
Q 002339 860 TGKTTLAIGDGANDVGMIQEADIG-IGISGVEG------MQAVMA-SDFSIAQFRFLERL 911 (934)
Q Consensus 860 ~~~~v~aiGDG~ND~~ml~~A~vG-Iam~~~e~------~~a~~~-AD~ii~~~~~l~~l 911 (934)
....+++|||+.||+.|++.|+++ |++.+... ...+.. ||+++.+...|..+
T Consensus 159 ~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 159 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred ChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 346899999999999999999998 67753322 125666 99999987777665
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00011 Score=77.72 Aligned_cols=41 Identities=15% Similarity=-0.090 Sum_probs=35.3
Q ss_pred cCCCchHHHHHHHHhc-CCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQA-GLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.+.+++.+.++.|++. |+++.++|+.....+......+|+.
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~ 155 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK 155 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4579999999999999 9999999999888877777777763
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00018 Score=75.58 Aligned_cols=49 Identities=6% Similarity=0.044 Sum_probs=38.6
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcC---CCHHHHHHHHHHcCcccCCceEE
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTG---DKMETAINIGFACSLLRQGMKQI 765 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTG---D~~~ta~~ia~~~gi~~~~~~~i 765 (934)
+.+-++++++|++|+++|++++++|| +...........+|+......++
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii 72 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVF 72 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEE
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHcc
Confidence 44557899999999999999999988 77777778888888854433443
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00021 Score=70.68 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=37.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCC-HHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK-METAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~-~~ta~~ia~~~gi~ 758 (934)
++.|++.++|+.|+++|++++++||.. ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 578999999999999999999999998 68888888888875
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.47 E-value=5.9e-05 Score=78.41 Aligned_cols=119 Identities=9% Similarity=0.010 Sum_probs=79.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.+.++.|++. ++++++|+.....+..+...+|+. - ..
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~-f--~~--------------------------------- 162 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP-W--DM--------------------------------- 162 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC-C--SE---------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC-c--ce---------------------------------
Confidence 4678999999999885 999999999888888888888773 1 00
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCChhhH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDV 874 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~---~~~~v~aiGDG~ND~ 874 (934)
++.+... ...+-|..+++.+.+. ....+++|||+.||+
T Consensus 163 -------------~~~~~~~--------------------------~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di 203 (254)
T 3umc_A 163 -------------LLCADLF--------------------------GHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDL 203 (254)
T ss_dssp -------------ECCHHHH--------------------------TCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHH
T ss_pred -------------EEeeccc--------------------------ccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhH
Confidence 0000000 0112223333322222 346799999999999
Q ss_pred HHHHHcCccEEEcccc---h----hhH--HHhCcEeecCccchhhhH
Q 002339 875 GMIQEADIGIGISGVE---G----MQA--VMASDFSIAQFRFLERLL 912 (934)
Q Consensus 875 ~ml~~A~vGIam~~~e---~----~~a--~~~AD~ii~~~~~l~~ll 912 (934)
.|.+.|+++++|.+.. + ... +..||+++.++..|..+|
T Consensus 204 ~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 204 KAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp HHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred HHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 9999999999885411 1 012 567999999988877663
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00014 Score=72.60 Aligned_cols=118 Identities=13% Similarity=0.084 Sum_probs=77.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.+ ++.|++. +++.++|+.....+..+...+|+...-..++
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~-------------------------------- 119 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIF-------------------------------- 119 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEE--------------------------------
Confidence 56799999 9999999 9999999999888888888888753211111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcCh--hhHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
.+.... ...| +--..+.+.+. ...+++|||+.||+.
T Consensus 120 ---------------~~~~~~------------------------~~Kp~~~~~~~~~~~~~---~~~~~~vGD~~~Di~ 157 (201)
T 2w43_A 120 ---------------SAESVK------------------------EYKPSPKVYKYFLDSIG---AKEAFLVSSNAFDVI 157 (201)
T ss_dssp ---------------EGGGGT------------------------CCTTCHHHHHHHHHHHT---CSCCEEEESCHHHHH
T ss_pred ---------------ehhhcC------------------------CCCCCHHHHHHHHHhcC---CCcEEEEeCCHHHhH
Confidence 111000 0111 11122333332 467999999999999
Q ss_pred HHHHcCccEEE-c-c-cchhhHHHhCcEeecCccchhhh
Q 002339 876 MIQEADIGIGI-S-G-VEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 876 ml~~A~vGIam-~-~-~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
|.+.|++++.+ . + .........+|+++.++..|..+
T Consensus 158 ~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 196 (201)
T 2w43_A 158 GAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEW 196 (201)
T ss_dssp HHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHH
T ss_pred HHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHH
Confidence 99999999766 2 1 11111344689999887766655
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00012 Score=77.01 Aligned_cols=124 Identities=11% Similarity=0.018 Sum_probs=80.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.++++.|++.|+++.++|+.... +..+...+|+...-..++
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~-------------------------------- 152 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVL-------------------------------- 152 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEE--------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEE--------------------------------
Confidence 46799999999999999999999996653 567777788743211111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCh-hhHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGA-NDVGM 876 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~-ND~~m 876 (934)
.+... -...-.|.--..+.+.+.- ....+++|||+. ||+.|
T Consensus 153 ---------------~~~~~----------------------~~~Kp~~~~~~~~~~~~g~-~~~~~~~vGD~~~~Di~~ 194 (263)
T 3k1z_A 153 ---------------TSEAA----------------------GWPKPDPRIFQEALRLAHM-EPVVAAHVGDNYLCDYQG 194 (263)
T ss_dssp ---------------EHHHH----------------------SSCTTSHHHHHHHHHHHTC-CGGGEEEEESCHHHHTHH
T ss_pred ---------------eeccc----------------------CCCCCCHHHHHHHHHHcCC-CHHHEEEECCCcHHHHHH
Confidence 10000 0000112222333444432 457899999997 99999
Q ss_pred HHHcCccEEEccc--chhh---HHHhCcEeecCccchhhhH
Q 002339 877 IQEADIGIGISGV--EGMQ---AVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 877 l~~A~vGIam~~~--e~~~---a~~~AD~ii~~~~~l~~ll 912 (934)
.+.|++++.+.+. .... ....+|+++.++..|..+|
T Consensus 195 a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 195 PRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred HHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 9999999987322 1111 1226999999988887775
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00027 Score=69.64 Aligned_cols=39 Identities=15% Similarity=0.281 Sum_probs=32.0
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
+.+++.+.++.|++.|++++++|+... .+..+...+|+.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~ 121 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIA 121 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCG
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCH
Confidence 679999999999999999999999764 455666666663
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00036 Score=73.45 Aligned_cols=50 Identities=10% Similarity=0.040 Sum_probs=41.2
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEc---CCCHHHHHHHHHHcCcccCCceEEE
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLT---GDKMETAINIGFACSLLRQGMKQIC 766 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gi~~~~~~~i~ 766 (934)
.++-+++.++|++|+++|++++++| |+.........+.+|+......++.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~ 84 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVT 84 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEE
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEc
Confidence 5677999999999999999999999 9999888888888887543334443
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00055 Score=70.98 Aligned_cols=117 Identities=13% Similarity=0.018 Sum_probs=77.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
.+.+++.+.++.|+ .|++++++|+.....+......+|+...-..
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 156 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPR---------------------------------- 156 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCC----------------------------------
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCce----------------------------------
Confidence 56799999999999 9999999999888777777766666431111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChh--hHHHHHHHHhhcCCCEEEEEcCCh-hhH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK--QKALVTRLVKEGTGKTTLAIGDGA-NDV 874 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~--qK~~iv~~lk~~~~~~v~aiGDG~-ND~ 874 (934)
+++...|. --..+.+.+.- ....+++|||+. ||+
T Consensus 157 ------------------------------------------i~~~~kp~~~~~~~~~~~l~~-~~~~~i~iGD~~~~Di 193 (251)
T 2pke_A 157 ------------------------------------------IEVVSEKDPQTYARVLSEFDL-PAERFVMIGNSLRSDV 193 (251)
T ss_dssp ------------------------------------------EEEESCCSHHHHHHHHHHHTC-CGGGEEEEESCCCCCC
T ss_pred ------------------------------------------eeeeCCCCHHHHHHHHHHhCc-CchhEEEECCCchhhH
Confidence 22222221 11233333332 446899999999 999
Q ss_pred HHHHHcCccEEEc--ccc-hh---h--HHHhCcE-eecCccchhhhH
Q 002339 875 GMIQEADIGIGIS--GVE-GM---Q--AVMASDF-SIAQFRFLERLL 912 (934)
Q Consensus 875 ~ml~~A~vGIam~--~~e-~~---~--a~~~AD~-ii~~~~~l~~ll 912 (934)
.|.+.|++++++- +.. .. . ....+|+ ++.++..|..+|
T Consensus 194 ~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l 240 (251)
T 2pke_A 194 EPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAV 240 (251)
T ss_dssp HHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHHHHH
T ss_pred HHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHHH
Confidence 9999999998662 221 00 0 1235888 888887776653
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00046 Score=72.50 Aligned_cols=51 Identities=12% Similarity=-0.007 Sum_probs=40.3
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcC---CCHHHHHHHHHHcCcccCCceEEE
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTG---DKMETAINIGFACSLLRQGMKQIC 766 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTG---D~~~ta~~ia~~~gi~~~~~~~i~ 766 (934)
.+.+-++++++|++|+++|++++++|| +...........+|+......++.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~ 75 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILV 75 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEE
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeC
Confidence 555668899999999999999999999 677777777788888644444443
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0012 Score=65.21 Aligned_cols=42 Identities=19% Similarity=0.288 Sum_probs=37.1
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCH---HHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKM---ETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~---~ta~~ia~~~gi~~ 759 (934)
++.|++.++|+.|+++|++++++|+... ..+..+...+|+..
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~ 78 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIID 78 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchh
Confidence 5889999999999999999999998876 77888888888853
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00042 Score=70.84 Aligned_cols=53 Identities=11% Similarity=-0.007 Sum_probs=40.4
Q ss_pred CCCEEEEEcCCh-hhHHHHHHcCccEEEcccc----------hhhHHHhCcEeecCccchhhhH
Q 002339 860 TGKTTLAIGDGA-NDVGMIQEADIGIGISGVE----------GMQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 860 ~~~~v~aiGDG~-ND~~ml~~A~vGIam~~~e----------~~~a~~~AD~ii~~~~~l~~ll 912 (934)
....+++|||+. ||+.|.+.|++++++.+.. ....+..||+++.++..|..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 171 EKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp CGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred CchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 346899999996 9999999999999883321 1113468999999987776663
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.007 Score=63.03 Aligned_cols=41 Identities=12% Similarity=0.074 Sum_probs=36.3
Q ss_pred CCCchHHHHHHHHhcCCeEEEEc---CCCHHHHHHHHHHcCccc
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLT---GDKMETAINIGFACSLLR 759 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gi~~ 759 (934)
+-+++.++++.+++.|++++++| |+...........+|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 66889999999999999999999 999988888888888743
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0021 Score=67.26 Aligned_cols=48 Identities=10% Similarity=0.108 Sum_probs=40.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEc---CCCHHHHHHHHHHcCcccCCceEEE
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLT---GDKMETAINIGFACSLLRQGMKQIC 766 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gi~~~~~~~i~ 766 (934)
.+ ++++++|++++++|++++++| |+..........++|+......++.
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~ 72 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYT 72 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEE
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheec
Confidence 45 899999999999999999999 8888888888889998654444443
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00063 Score=67.67 Aligned_cols=41 Identities=12% Similarity=0.010 Sum_probs=35.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.+++.+.++.|++.| +++++|+.....+..+...+|+..
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~ 126 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGE 126 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHH
Confidence 36799999999999999 999999999888888888888753
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00037 Score=70.86 Aligned_cols=52 Identities=12% Similarity=0.029 Sum_probs=35.7
Q ss_pred CCEEEEEcCChhhHHHHHHcCccE--EE-cccch-hhHHHhCcEeecCccchhhhH
Q 002339 861 GKTTLAIGDGANDVGMIQEADIGI--GI-SGVEG-MQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 861 ~~~v~aiGDG~ND~~ml~~A~vGI--am-~~~e~-~~a~~~AD~ii~~~~~l~~ll 912 (934)
...++||||+.||+.|.+.|++.. .+ .|... ......+|+++.++..|..++
T Consensus 154 ~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l 209 (218)
T 2o2x_A 154 LQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAI 209 (218)
T ss_dssp GGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHH
T ss_pred HHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHH
Confidence 467999999999999999999875 34 23211 112235788887776666554
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.001 Score=67.72 Aligned_cols=53 Identities=19% Similarity=0.217 Sum_probs=40.0
Q ss_pred CCCEEEEEcCCh-hhHHHHHHcCccEEE-c-ccchhhHHHhCcEeecCccchhhhH
Q 002339 860 TGKTTLAIGDGA-NDVGMIQEADIGIGI-S-GVEGMQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 860 ~~~~v~aiGDG~-ND~~ml~~A~vGIam-~-~~e~~~a~~~AD~ii~~~~~l~~ll 912 (934)
....+++|||+. ||+.|.+.|++++.+ . +.........+|+++.++..|..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 171 DASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred CchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 446899999998 999999999999876 2 2211112557899999988887764
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00057 Score=68.60 Aligned_cols=36 Identities=11% Similarity=0.074 Sum_probs=31.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 754 (934)
++.|++.+.++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 467899999999999 999999999888777766665
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0028 Score=64.99 Aligned_cols=62 Identities=15% Similarity=0.184 Sum_probs=41.3
Q ss_pred hHHHHHHHHhhc---CCCEEEEEcCC-hhhHHHHHHcCccEEE--cccch-hhHH---HhCcEeecCccchh
Q 002339 848 QKALVTRLVKEG---TGKTTLAIGDG-ANDVGMIQEADIGIGI--SGVEG-MQAV---MASDFSIAQFRFLE 909 (934)
Q Consensus 848 qK~~iv~~lk~~---~~~~v~aiGDG-~ND~~ml~~A~vGIam--~~~e~-~~a~---~~AD~ii~~~~~l~ 909 (934)
.|...++.+.+. ....++||||+ .||+.|++.|++++++ .|... ...+ ..+|+++.++..|.
T Consensus 177 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el~ 248 (250)
T 2c4n_A 177 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred CCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHhh
Confidence 344555544432 34689999999 7999999999999755 23221 1133 36999998766543
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0036 Score=62.98 Aligned_cols=42 Identities=17% Similarity=0.161 Sum_probs=38.3
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.|++.++++.|++.|+++.++|+.....+....+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 457999999999999999999999999999999999998864
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.00046 Score=63.95 Aligned_cols=42 Identities=12% Similarity=-0.007 Sum_probs=35.5
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.++.|++.++++.|+++|++++++|+.....+..+.+.+|+.
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~ 58 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence 346788999999999999999999999888777777776654
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.003 Score=65.95 Aligned_cols=123 Identities=15% Similarity=0.119 Sum_probs=79.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.++++.|++ |+++.++|+.....+..+...+|+...-..++.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~------------------------------- 168 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVI------------------------------- 168 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEE-------------------------------
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEe-------------------------------
Confidence 567999999999997 699999999998888888888887542211111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCC-hhhHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDG-ANDVGM 876 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG-~ND~~m 876 (934)
+.... ...-.|+--..+.+.+.- ....+++|||+ .||+.+
T Consensus 169 ----------------~~~~~----------------------~~KP~p~~~~~~~~~~~~-~~~~~~~vGDs~~~Di~~ 209 (260)
T 2gfh_A 169 ----------------GGEQK----------------------EEKPAPSIFYHCCDLLGV-QPGDCVMVGDTLETDIQG 209 (260)
T ss_dssp ----------------GGGSS----------------------SCTTCHHHHHHHHHHHTC-CGGGEEEEESCTTTHHHH
T ss_pred ----------------cCCCC----------------------CCCCCHHHHHHHHHHcCC-ChhhEEEECCCchhhHHH
Confidence 10000 000011111223333332 34689999995 999999
Q ss_pred HHHcCc--cEEEcccch--hhHHHhCcEeecCccchhhh
Q 002339 877 IQEADI--GIGISGVEG--MQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 877 l~~A~v--GIam~~~e~--~~a~~~AD~ii~~~~~l~~l 911 (934)
-+.|++ .|++..... ......+|+++.++..|..+
T Consensus 210 A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~ 248 (260)
T 2gfh_A 210 GLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPAL 248 (260)
T ss_dssp HHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHH
T ss_pred HHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHH
Confidence 999999 577743211 11234689999888777665
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0062 Score=60.55 Aligned_cols=34 Identities=12% Similarity=0.175 Sum_probs=29.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINI 751 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~i 751 (934)
++.|++.++|+.|+++|+++.++||.....+..+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~ 69 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPL 69 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh
Confidence 5679999999999999999999999887766443
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.006 Score=65.33 Aligned_cols=44 Identities=14% Similarity=0.117 Sum_probs=36.6
Q ss_pred ecccCCCchHHHHHHHHhcCCeEEEEc---CCCHHHHHHHHHHcCcc
Q 002339 715 VEDKLQKGVPQCIDKLAQAGLKIWVLT---GDKMETAINIGFACSLL 758 (934)
Q Consensus 715 i~D~lr~~~~~~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 758 (934)
-.+++-+++.++|++|+++|++++++| |+.........+.+|+.
T Consensus 34 ~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 34 NGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp ETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred cCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 356677899999999999999999999 57777776777778874
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.00054 Score=68.45 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=26.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~t 747 (934)
++.|++.+.++.|++.|++++++|+.....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 567999999999999999999999976544
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0063 Score=63.00 Aligned_cols=118 Identities=14% Similarity=0.212 Sum_probs=77.1
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (934)
..++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-..
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~-------------------------------- 159 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF-------------------------------- 159 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--------------------------------
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--------------------------------
Confidence 34678999999999999999999888764 35566677787542211
Q ss_pred hhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
++++.... ...-.|+-=..+++.+.- ....+++|||..+|+.
T Consensus 160 ---------------i~~~~~~~----------------------~~KP~p~~~~~a~~~lg~-~p~e~l~VGDs~~Di~ 201 (250)
T 4gib_A 160 ---------------IADAGKCK----------------------NNKPHPEIFLMSAKGLNV-NPQNCIGIEDASAGID 201 (250)
T ss_dssp ---------------ECCGGGCC----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEESSHHHHH
T ss_pred ---------------eecccccC----------------------CCCCcHHHHHHHHHHhCC-ChHHeEEECCCHHHHH
Confidence 11111100 000112222233444443 4568999999999999
Q ss_pred HHHHcCc-cEEEcccchhhHHHhCcEeecCccch
Q 002339 876 MIQEADI-GIGISGVEGMQAVMASDFSIAQFRFL 908 (934)
Q Consensus 876 ml~~A~v-GIam~~~e~~~a~~~AD~ii~~~~~l 908 (934)
+-+.|++ .|++.+.+. ...||+++.++..|
T Consensus 202 aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL 232 (250)
T 4gib_A 202 AINSANMFSVGVGNYEN---LKKANLVVDSTNQL 232 (250)
T ss_dssp HHHHTTCEEEEESCTTT---TTTSSEEESSGGGC
T ss_pred HHHHcCCEEEEECChhH---hccCCEEECChHhC
Confidence 9999998 567755443 34699999987776
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.20 E-value=0.009 Score=65.70 Aligned_cols=42 Identities=19% Similarity=0.182 Sum_probs=38.1
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.||+.++|+.|+++|+++.++|+.....+..+...+|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999988888888888864
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0056 Score=63.07 Aligned_cols=43 Identities=5% Similarity=0.085 Sum_probs=36.1
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHH----HHHHHHHHcCcc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKME----TAINIGFACSLL 758 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~----ta~~ia~~~gi~ 758 (934)
+.++.|++.+.|+.|+++|+++.++||+... .+..-.+.+||.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 4678899999999999999999999999753 566666677874
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.035 Score=56.43 Aligned_cols=41 Identities=12% Similarity=0.136 Sum_probs=35.7
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
-++.|++.++|+.|++.| ++.++|+.....+..+...+|+.
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~ 135 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLW 135 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcH
Confidence 368899999999999999 99999998888888888777763
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.021 Score=61.37 Aligned_cols=41 Identities=15% Similarity=0.268 Sum_probs=37.3
Q ss_pred ecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 002339 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (934)
Q Consensus 715 i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (934)
....+.+++.+.|+.|+++|++|||+||-....+..+|..+
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 34467899999999999999999999999999999999886
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=95.96 E-value=0.004 Score=63.37 Aligned_cols=34 Identities=9% Similarity=0.013 Sum_probs=29.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG 752 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia 752 (934)
++.|++.++++.|++. +++.++|+.....+..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHH
Confidence 3668999999999998 999999999888777665
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=95.92 E-value=0.036 Score=54.10 Aligned_cols=41 Identities=12% Similarity=0.215 Sum_probs=26.3
Q ss_pred EEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEE
Q 002339 622 LLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAY 666 (934)
Q Consensus 622 ~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~ 666 (934)
..+.-|..+.|... +-.........+.++..+|..++.+|.
T Consensus 132 ~~v~iGn~~~m~~~----gi~i~~~~~~~~~~~~~~G~T~V~vai 172 (185)
T 2kmv_A 132 YKVLIGNREWMIRN----GLVINNDVNDFMTEHERKGRTAVLVAV 172 (185)
T ss_dssp EEEEEECHHHHHHH----TCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred eEEEECCHHHHHHc----CCCCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 34556887766432 112333455667788889999999994
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.55 E-value=0.0086 Score=58.32 Aligned_cols=41 Identities=22% Similarity=0.258 Sum_probs=33.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCC---------------CHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGD---------------KMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD---------------~~~ta~~ia~~~gi~ 758 (934)
++.|++.++|+.|+++|++++++|+. ....+..+...+|+.
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 57899999999999999999999997 345566666677763
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.52 E-value=0.014 Score=60.10 Aligned_cols=43 Identities=12% Similarity=0.061 Sum_probs=35.7
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHH----HHHHHHHHcCcc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKME----TAINIGFACSLL 758 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~----ta~~ia~~~gi~ 758 (934)
+.++.|++.+.|+.|+++|+++.++||++.. .+..-.+.+||.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 5678899999999999999999999999763 555556667774
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.50 E-value=0.022 Score=60.69 Aligned_cols=32 Identities=25% Similarity=0.267 Sum_probs=28.5
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHH
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~t 747 (934)
++++.|++.++|+.|+++|+++.++||.....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 56778999999999999999999999998543
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=95.05 E-value=0.099 Score=53.80 Aligned_cols=44 Identities=11% Similarity=0.145 Sum_probs=32.0
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEc---CCCHHHHHHHHHHcCccc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLT---GDKMETAINIGFACSLLR 759 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gi~~ 759 (934)
.+++-+++.++++.|++.|++++++| |+...........+|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 45555789999999999999999999 555555555556667643
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.96 E-value=0.02 Score=59.45 Aligned_cols=43 Identities=14% Similarity=0.144 Sum_probs=33.7
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHH---HHHHHHHcCcc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMET---AINIGFACSLL 758 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~t---a~~ia~~~gi~ 758 (934)
+.++-|++.++|+.|+++|+++.++||+.... +......+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 35677999999999999999999999998443 33444556764
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.74 E-value=0.014 Score=58.80 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=34.3
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.|++.++++.|+++|++++++|+... .+..+...+|+..
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~ 135 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKK 135 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHh
Confidence 5779999999999999999999999866 4667777777743
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.24 E-value=0.21 Score=51.76 Aligned_cols=39 Identities=15% Similarity=0.240 Sum_probs=33.1
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (934)
-++.|++.++++.|+++|+++.++|+-....+..+-..+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~ 167 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 167 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence 468899999999999999999999999887776665533
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.13 E-value=0.082 Score=54.16 Aligned_cols=41 Identities=15% Similarity=0.098 Sum_probs=32.7
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
.++.|++.+.++.|++.|+++.++|+... +..+-..+|+..
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~ 134 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE 134 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc
Confidence 35789999999999999999999998654 444556677754
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=93.56 E-value=0.71 Score=47.62 Aligned_cols=43 Identities=19% Similarity=0.189 Sum_probs=34.8
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH---cCcc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA---CSLL 758 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~---~gi~ 758 (934)
.+.+-+++.++|++|+++|++++++||+...+...++.. +|+.
T Consensus 15 ~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 15 GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 344448999999999999999999999998777776665 4664
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=92.53 E-value=0.16 Score=52.57 Aligned_cols=44 Identities=7% Similarity=0.132 Sum_probs=35.0
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH----cCccc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA----CSLLR 759 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~----~gi~~ 759 (934)
.++.-+++.++++.+++.|+++.++||+...+...++.. +|+..
T Consensus 19 ~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 19 GKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp TTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred CCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 344447889999999999999999999998777766664 77643
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=92.41 E-value=0.1 Score=48.31 Aligned_cols=40 Identities=15% Similarity=0.045 Sum_probs=34.0
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCC---HHHHHHHHHHcCcc
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDK---METAINIGFACSLL 758 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~---~~ta~~ia~~~gi~ 758 (934)
+-+++.++|++|+++|++++++|||+ ...+.....+.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45789999999999999999999998 55677777788773
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=91.37 E-value=0.13 Score=51.44 Aligned_cols=28 Identities=25% Similarity=0.264 Sum_probs=25.0
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHH
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ 746 (934)
+.+++.+.|+.|+++|+++.++||....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~ 116 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPT 116 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 4678999999999999999999999754
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=89.61 E-value=1.1 Score=42.58 Aligned_cols=40 Identities=10% Similarity=0.129 Sum_probs=24.1
Q ss_pred EEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEE
Q 002339 623 LLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAY 666 (934)
Q Consensus 623 l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~ 666 (934)
.+.=|....|... +-.........+..+..+|..++.+|.
T Consensus 114 ~v~iGn~~~m~~~----gi~~~~~~~~~~~~~~~~G~T~v~va~ 153 (165)
T 2arf_A 114 SVLIGNREWLRRN----GLTISSDVSDAMTDHEMKGQTAILVAI 153 (165)
T ss_dssp EEEEECHHHHHHH----HCSSCHHHHHHHHHHHTTTSEEEEEEE
T ss_pred EEEEcCHHHHHhc----CCCCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 4445877666432 111223345566777889999998984
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=87.52 E-value=0.82 Score=50.85 Aligned_cols=26 Identities=27% Similarity=0.500 Sum_probs=24.4
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCC
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDK 744 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~ 744 (934)
+-+++.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=87.31 E-value=0.58 Score=53.70 Aligned_cols=26 Identities=23% Similarity=0.298 Sum_probs=24.3
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCC
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGD 743 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD 743 (934)
++.+++.++|+.|+++|+++.++|+-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 57799999999999999999999995
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=84.97 E-value=0.24 Score=52.36 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=27.2
Q ss_pred CCCCeeeecCcccccc---------ccceEEEecCCCceeecceE
Q 002339 397 SGIPAQARTSNLNEEL---------GQVDTILSDKTGTLTCNQMD 432 (934)
Q Consensus 397 ~~~~i~vk~~~~~e~L---------g~v~~i~~DKTGTLT~n~m~ 432 (934)
.+.++++|++..+|++ .++. |+||||||||+....
T Consensus 17 ~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~~ 60 (297)
T 4fe3_A 17 QKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSYN 60 (297)
T ss_dssp TSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEET
T ss_pred hcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeeccC
Confidence 6788999999998873 3343 678999999986543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 934 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 7e-29 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-20 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 6e-14 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 1e-08 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 2e-07 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 6e-04 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 7e-04 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 0.004 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 113 bits (284), Expect = 7e-29
Identities = 42/230 (18%), Positives = 66/230 (28%), Gaps = 35/230 (15%)
Query: 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFL 560
+ E L + ++ D L+ I A+C+ + + NE G E A
Sbjct: 28 TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEK-VGEATETALT 86
Query: 561 VAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQ 620
+ S ER + + K L+F+ RK MSV
Sbjct: 87 TLVEKMNVFNTEVRNLSKV--ERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSS 144
Query: 621 -----ILLLCKGADSIIFDRLSKNG---------RMYEEATTKLLNEYGEA--GLRTLAL 664
+ KGA + DR + +E ++ E+G LR LAL
Sbjct: 145 RAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL 204
Query: 665 AYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATA 714
A + + + E DL VG
Sbjct: 205 ATRDTPPKREEMVLDDSSRF----------------MEYETDLTFVGVVG 238
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 88.4 bits (218), Expect = 2e-20
Identities = 34/214 (15%), Positives = 58/214 (27%), Gaps = 46/214 (21%)
Query: 517 EPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAE--SPDEAAFLVAAREFGFEFYRRT 574
+ T RI +C+ A+ + +E +++ E+A L
Sbjct: 28 DKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSV---- 83
Query: 575 QSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDE--DGQILLLCKGADSII 632
+ + + + F S K I E +L+ KGA I
Sbjct: 84 --------------RKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERI 129
Query: 633 FDRLS---KNGRMYE------EATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQK 683
DR S G+ +A E G G R L L ++
Sbjct: 130 LDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTD 189
Query: 684 AKSSIGADREATLEHVSDMMEKDLILVGATAVED 717
+ + L VG ++ D
Sbjct: 190 ELNFP---------------TEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 72.1 bits (176), Expect = 6e-14
Identities = 48/446 (10%), Positives = 106/446 (23%), Gaps = 114/446 (25%)
Query: 477 SGSEIELETVITSND-GNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535
+ L + I ++ + I+ F+ ++++ N + +LF I+ H
Sbjct: 32 DKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLF--IVFSIHL 89
Query: 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREF 595
++ + + AF+ + I
Sbjct: 90 I---------DILKKLSHDEIEAFMYQDEPVELKLQN-------ISTNLADCFN------ 127
Query: 596 KILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYG 655
L+ + + + ++ L + A + + + + L
Sbjct: 128 -----LNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDAT-----LFSLKGALWTLA 177
Query: 656 EAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAV 715
+ + L K ++ E + + G
Sbjct: 178 QEVYQEWYLGSKLYEDVE---------------------------KKIARTTFKTGYIYQ 210
Query: 716 EDKLQK--GVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD 773
E L+ V ++ L AG ++ + TG + LL TA +
Sbjct: 211 EIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVL 270
Query: 774 SVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA 833
+A P+ L
Sbjct: 271 EAENMYPQARP----------------LGKPNP-----------------FSYIAAL--- 294
Query: 834 VECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEAD---IGI--GISG 888
+ + + +GD D+ Q+ IG G+ G
Sbjct: 295 ------YGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKG 347
Query: 889 VEGMQAVMAS--DFSIAQFRFLERLL 912
+ + A D+ I L +L
Sbjct: 348 KDAAGELEAHHADYVINHLGELRGVL 373
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 53.3 bits (127), Expect = 1e-08
Identities = 36/202 (17%), Positives = 60/202 (29%), Gaps = 51/202 (25%)
Query: 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQI 765
D T D +K V I AG+++ ++TGD TAI I
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC------------- 54
Query: 766 CITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDM 825
+ I + + G+ +
Sbjct: 55 ------------------------------RRIGIFGENEEVADRAYTGREFDDLPLAEQ 84
Query: 826 KHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIG 885
+ + RV P K+ + ++ T GDG ND +++A+IGI
Sbjct: 85 REAC------RRACCFARVEPSHKSKIVEYLQSYDEI-TAMTGDGVNDAPALKKAEIGIA 137
Query: 886 ISGVEGMQAVMASDFSIAQFRF 907
+ A AS+ +A F
Sbjct: 138 MGSGT-AVAKTASEMVLADDNF 158
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.3 bits (119), Expect = 2e-07
Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 5/93 (5%)
Query: 817 LAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876
A L+ + G + + ++ L ++ K + IGDGA D+
Sbjct: 127 FANRLKFYFNGEYAGFDETQPTAESG----GKGKVIKLLKEKFHFKKIIMIGDGATDMEA 182
Query: 877 IQEADIGIGISGVEGMQAVM-ASDFSIAQFRFL 908
AD IG G Q V + + I F L
Sbjct: 183 CPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 38.9 bits (90), Expect = 6e-04
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Query: 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETA------INIGFACSLLR 759
D D L++ + +L + G+K+ ++TGD +A +N+ + +
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL 68
Query: 760 QGMKQICITALNSDSV 775
K + L + V
Sbjct: 69 PHQKSEEVKKLQAKEV 84
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 40.0 bits (92), Expect = 7e-04
Identities = 24/178 (13%), Positives = 55/178 (30%), Gaps = 12/178 (6%)
Query: 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINI----GFACSLLRQGMKQICITALN 771
+ + + I + G+ I ++TG+ ++ A G + ++ + I
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 772 SDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLG 831
+ + + I + NA + L+I +T+ ++ +
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDRR---AGLVIMRETINVETVREIINELNL 133
Query: 832 LAVECASVICCRVSPKQKALVTRLVKEG-----TGKTTLAIGDGANDVGMIQEADIGI 884
V S V + + K K +GDG ND+ + +
Sbjct: 134 NLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKV 191
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 37.8 bits (86), Expect = 0.004
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 864 TLAIGDGANDVGMIQEADIGIGISG 888
TL +GDG ND +++ D + + G
Sbjct: 206 TLGLGDGPNDAPLLEVMDYAVIVKG 230
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 934 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.94 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.9 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.9 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.86 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.84 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.83 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.27 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.09 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.09 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.08 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.05 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.0 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.96 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.94 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.88 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.86 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.77 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.76 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.71 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.66 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.57 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.52 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.52 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.49 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.43 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.02 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.63 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.38 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.38 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.32 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.24 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.21 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.04 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.85 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.84 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.69 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.54 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.25 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.21 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.18 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.03 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.99 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.95 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 95.94 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 95.49 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.22 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.54 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 94.23 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 93.54 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 93.42 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 92.21 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 91.92 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 86.88 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 86.77 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 86.21 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 85.83 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 83.46 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.94 E-value=2.4e-27 Score=228.73 Aligned_cols=148 Identities=24% Similarity=0.337 Sum_probs=121.0
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (934)
-||+|++++++|+.|+++||+|||+|||+..||.++|++|||+.++..+.
T Consensus 18 ~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~------------------------------ 67 (168)
T d1wpga2 18 LDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA------------------------------ 67 (168)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCT------------------------------
T ss_pred cCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccc------------------------------
Confidence 39999999999999999999999999999999999999999987654320
Q ss_pred hhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
...++|..+......+..+.+.. ..+|+|++|+||..+|+.+++ .|++|+|+|||.||++
T Consensus 68 -------------~~~~~~~~~~~~~~~~~~~~~~~------~~v~ar~~p~~K~~lv~~l~~-~g~~Va~vGDG~nD~~ 127 (168)
T d1wpga2 68 -------------DRAYTGREFDDLPLAEQREACRR------ACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAP 127 (168)
T ss_dssp -------------TTEEEHHHHHHSCHHHHHHHHHH------CCEEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHH
T ss_pred -------------cccccccccchhhHHHHhhhhhh------hhhhhccchhHHHHHHHHHHh-cccceeEEecCCCCHH
Confidence 01345555554444444444333 339999999999999999998 8999999999999999
Q ss_pred HHHHcCccEEEc-ccchhhHHHhCcEeecCccc--hhhhHhhhc
Q 002339 876 MIQEADIGIGIS-GVEGMQAVMASDFSIAQFRF--LERLLVVHG 916 (934)
Q Consensus 876 ml~~A~vGIam~-~~e~~~a~~~AD~ii~~~~~--l~~lll~~G 916 (934)
||+.|||||+|+ +.+. |+++||+++.+.++ +..+ +.+|
T Consensus 128 AL~~AdvGIa~~~gt~~--a~~aAdivl~~~~l~~v~~~-I~~G 168 (168)
T d1wpga2 128 ALKKAEIGIAMGSGTAV--AKTASEMVLADDNFSTIVAA-VEEG 168 (168)
T ss_dssp HHHHSSEEEEETTSCHH--HHHTCSEEETTCCTHHHHHH-HHHH
T ss_pred HHHhCCEEEEeccccHH--HHHhCCEEEccCCHHHHHHH-HHcC
Confidence 999999999995 4555 89999999998555 6666 6665
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.90 E-value=4.3e-25 Score=223.91 Aligned_cols=170 Identities=21% Similarity=0.212 Sum_probs=123.9
Q ss_pred hhHHHHHHHHHhhcceeeecccCCCCce--EEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEE
Q 002339 520 VDTLLLFFRILAICHTAIPELNEETGNL--TYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597 (934)
Q Consensus 520 ~~~~~~~~~~l~lC~~~~~~~~~~~~~~--~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 597 (934)
.+.+..++.++++||++....+...... ....|+|.|.||+.+|...|..... ....|++
T Consensus 31 ~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~------------------~r~~~~~ 92 (214)
T d1q3ia_ 31 SPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK------------------MRDRNPK 92 (214)
T ss_dssp SHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHH------------------HHHTSCE
T ss_pred CHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHH------------------HHhhCcE
Confidence 4566789999999999976554321110 1125899999999999987765432 2456778
Q ss_pred eEecCCCCCCceEEEEEEcC--CCcEEEEEcccchhhhHhhhc---------cccccHHHHHHHHHHHHhcCCeEEEEEE
Q 002339 598 LNLLDFTSKRKRMSVIVRDE--DGQILLLCKGADSIIFDRLSK---------NGRMYEEATTKLLNEYGEAGLRTLALAY 666 (934)
Q Consensus 598 l~~~~F~s~rkrmsviv~~~--~~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~Glr~l~~A~ 666 (934)
++.+||+|.||||+++++.+ ++.+++|+|||||.|+++|+. .+.+.++.+.+.+++|+.+|+|||++||
T Consensus 93 v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~ 172 (214)
T d1q3ia_ 93 VAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQ 172 (214)
T ss_dssp EEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred eeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEEE
Confidence 89999999999999999975 467999999999999999985 1234678899999999999999999999
Q ss_pred EeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCc
Q 002339 667 KQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKG 722 (934)
Q Consensus 667 k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~ 722 (934)
|.++.+++..|... +.+ ..+.+|+||+|+|++||+||+|+.
T Consensus 173 k~l~~~~~~~~~~~----------~~~-----~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 173 LNLPSGKFPRGFKF----------DTD-----ELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEECTTTSCTTCCC----------CTT-----TTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EecCcccccccccc----------Chh-----hhhhhcCCCEEEEEEEEEeCCCCC
Confidence 99998776554221 110 114567899999999999999974
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.90 E-value=2.8e-24 Score=198.36 Aligned_cols=118 Identities=25% Similarity=0.366 Sum_probs=101.0
Q ss_pred CceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHH
Q 002339 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKD 785 (934)
Q Consensus 706 dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 785 (934)
|.+..+.++++|++|++++++|+.|+++||++||+|||+..+|..+|++|||..
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~-------------------------- 62 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-------------------------- 62 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------
T ss_pred CCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh--------------------------
Confidence 555677899999999999999999999999999999999999999999999832
Q ss_pred hHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEE
Q 002339 786 NILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTL 865 (934)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~ 865 (934)
++++++|++|..+++.++. +..|+
T Consensus 63 ------------------------------------------------------v~~~~~p~~k~~~v~~~q~--~~~v~ 86 (135)
T d2b8ea1 63 ------------------------------------------------------VIAEVLPHQKSEEVKKLQA--KEVVA 86 (135)
T ss_dssp ------------------------------------------------------EECSCCHHHHHHHHHHHTT--TSCEE
T ss_pred ------------------------------------------------------hccccchhHHHHHHHHHHc--CCEEE
Confidence 8899999999999999986 57999
Q ss_pred EEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcEeecCccc
Q 002339 866 AIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDFSIAQFRF 907 (934)
Q Consensus 866 aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~ii~~~~~ 907 (934)
|+|||.||++||+.|||||+|+ +.+. ++++||++|.+.++
T Consensus 87 ~vGDg~nD~~aL~~Advgia~~~~~~~--~~~aADivl~~~~l 127 (135)
T d2b8ea1 87 FVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDL 127 (135)
T ss_dssp EEECSSSSHHHHHHSSEEEEECCC----------SEEESSCCT
T ss_pred EEeCCCCcHHHHHhCCeeeecCccCHH--HHHhCCEEEECCCH
Confidence 9999999999999999999995 4554 89999999998654
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.86 E-value=9.2e-27 Score=258.08 Aligned_cols=277 Identities=13% Similarity=0.062 Sum_probs=185.3
Q ss_pred HHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCC
Q 002339 525 LFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFT 604 (934)
Q Consensus 525 ~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~ 604 (934)
++..+.++|+.+..... .+.|++.+++..++..+..+.. ....+.....+||+
T Consensus 79 dl~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~i~f~ 131 (380)
T d1qyia_ 79 DMLFIVFSIHLIDILKK---------LSHDEIEAFMYQDEPVELKLQN------------------ISTNLADCFNLNEQ 131 (380)
T ss_dssp HHHHHHHHHHHHHHHTT---------SCHHHHHHHHHCSSCHHHHHTT------------------SGGGCSSCCCCCTT
T ss_pred HHHHHHHHHHHHHHHhh---------cCCCcHHHHHHHHhhccchHHH------------------HHHhccccccCCcc
Confidence 34455566765532221 3678888887654322211111 12344456678999
Q ss_pred CCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHH
Q 002339 605 SKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKA 684 (934)
Q Consensus 605 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a 684 (934)
+.+|+|+++....++.+.++.+|+++.+... ......+...+..++.+|+|++++|++..+..+
T Consensus 132 ~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~----------- 195 (380)
T d1qyia_ 132 LPLQFLDNVKVGKNNIYAALEEFATTELHVS-----DATLFSLKGALWTLAQEVYQEWYLGSKLYEDVE----------- 195 (380)
T ss_dssp TTHHHHTTCCSSHHHHHHHHHHHHHHHTTCS-----CCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHH-----------
T ss_pred hHHHHHhhhcccccchhHhhhhccHhhcCCc-----HHHHHHHHhHHHHHHHHHHHHHHHhhhcccccc-----------
Confidence 9999999887655555666677777665211 112334566778899999999998875432221
Q ss_pred HhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCC--chHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCc
Q 002339 685 KSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQK--GVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGM 762 (934)
Q Consensus 685 ~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~--~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~ 762 (934)
.....+....|+++.+++++| +++++|+.|+++||+++|+|||+..+|..+++++||...-.
T Consensus 196 ----------------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~ 259 (380)
T d1qyia_ 196 ----------------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFE 259 (380)
T ss_dssp ----------------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSC
T ss_pred ----------------cccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCC
Confidence 122345667899999999766 99999999999999999999999999999999999975311
Q ss_pred eEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhh---------HHHHHHHHhhh
Q 002339 763 KQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALE---------DDMKHHFLGLA 833 (934)
Q Consensus 763 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~---------~~~~~~~~~~~ 833 (934)
... ++++........ .-....+..
T Consensus 260 ~~~---------------------------------------------i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~-- 292 (380)
T d1qyia_ 260 ADF---------------------------------------------IATASDVLEAENMYPQARPLGKPNPFSYIA-- 292 (380)
T ss_dssp GGG---------------------------------------------EECHHHHHHHHHHSTTSCCCCTTSTHHHHH--
T ss_pred cce---------------------------------------------EEecchhhhhhhhccccccccCCChHHHHH--
Confidence 100 111111100000 000011111
Q ss_pred hccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcC---ccEEEc--ccchhh--HHHhCcEeecCcc
Q 002339 834 VECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEAD---IGIGIS--GVEGMQ--AVMASDFSIAQFR 906 (934)
Q Consensus 834 ~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~---vGIam~--~~e~~~--a~~~AD~ii~~~~ 906 (934)
...++|.+|.+|..+++.++. .++.|+|+|||.||++|++.|| |||+|+ |.+..+ ....||+++.++.
T Consensus 293 ----~~~~~~~~~~~k~~iv~~~~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~ 367 (380)
T d1qyia_ 293 ----ALYGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLG 367 (380)
T ss_dssp ----HHHCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGG
T ss_pred ----HHHHcCCCHHHHHHHHHHhCC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHH
Confidence 125678999999999999997 8899999999999999999999 899774 444311 2237999999988
Q ss_pred chhhhH
Q 002339 907 FLERLL 912 (934)
Q Consensus 907 ~l~~ll 912 (934)
.|.++|
T Consensus 368 el~~il 373 (380)
T d1qyia_ 368 ELRGVL 373 (380)
T ss_dssp GHHHHH
T ss_pred HHHHHH
Confidence 877764
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.84 E-value=1.1e-21 Score=202.33 Aligned_cols=178 Identities=23% Similarity=0.249 Sum_probs=126.4
Q ss_pred ChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEe
Q 002339 519 NVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598 (934)
Q Consensus 519 ~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il 598 (934)
..+.+..++.++++||++....++..+.. ...++|+|.||+.+|.+.|+........... .............|+++
T Consensus 46 ~~~~l~~ll~~~~LCn~a~l~~~~~~~~~-~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v 122 (239)
T d1wpga3 46 QFDGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNVFNTEVRNLSKV--ERANACNSVIRQLMKKE 122 (239)
T ss_dssp GCHHHHHHHHHHHHSCSCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCTTCCCCSSSCHH--HHTTHHHHHHHHHEEEE
T ss_pred ccHHHHHHHHHHHhcCCCEeeecCCCCeE-EEcCCCCcHHHHHHHHHhCCChHHhhccchh--hhhccchhhhhhhCeEE
Confidence 34567889999999999987765544333 4569999999999999998765432110000 00000000013579999
Q ss_pred EecCCCCCCceEEEEEEcCCC-----cEEEEEcccchhhhHhhhc---------cccccHHHHHHHHHHH--HhcCCeEE
Q 002339 599 NLLDFTSKRKRMSVIVRDEDG-----QILLLCKGADSIIFDRLSK---------NGRMYEEATTKLLNEY--GEAGLRTL 662 (934)
Q Consensus 599 ~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~~~~~--~~~Glr~l 662 (934)
+.+||||.||||||+++.+++ .+.+|+|||||.|+++|+. ...+.++.+.+.++++ +.+|+|||
T Consensus 123 ~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvL 202 (239)
T d1wpga3 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 202 (239)
T ss_dssp EEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred EEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEE
Confidence 999999999999999998654 4789999999999999975 2234566677777776 67999999
Q ss_pred EEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeee
Q 002339 663 ALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAV 715 (934)
Q Consensus 663 ~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i 715 (934)
++|||+++.++...+.+ +. ...+.+|+||+|+|++||
T Consensus 203 a~A~k~~~~~~~~~~~~-----------~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 203 ALATRDTPPKREEMVLD-----------DS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEEESSCCCGGGCCTT-----------CG-----GGHHHHTCSEEEEEEEEE
T ss_pred EEEEEECCccccccccc-----------ch-----hhHHHhcCCCEEEEEECC
Confidence 99999998654322211 00 012578999999999986
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.83 E-value=4.1e-21 Score=170.60 Aligned_cols=108 Identities=21% Similarity=0.196 Sum_probs=87.4
Q ss_pred eEEEEeCCCeE--EEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCChh
Q 002339 138 KVSVHVGNGVF--SYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDE 215 (934)
Q Consensus 138 ~~~V~~r~g~~--~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~ 215 (934)
+++|+ |+|++ ++|++++|+|||||.|++|+.+||||+||.... +.++||||+|||||.|+.|.+.+...
T Consensus 2 ~~kV~-R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~--~~l~vdes~lTGEs~pv~K~~~~~~~------ 72 (115)
T d1wpga1 2 MGKVY-RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGESVSVIKHTEPVPD------ 72 (115)
T ss_dssp EEEEE-BSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCCEEECHHHHSCCSCEECCCSCCCC------
T ss_pred ceEEE-ECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeec--cceEEEEeecccceEEEEeecccccc------
Confidence 57899 88874 789999999999999999999999999997543 55899999999999999998754331
Q ss_pred hhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhhc
Q 002339 216 AFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQN 283 (934)
Q Consensus 216 ~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~ 283 (934)
+.....+..|++|.||.+. .++++++|++||.+|.+++.
T Consensus 73 ----------------------------~~~~~~~~~n~lf~GT~V~-~G~~~~~V~~tG~~T~~G~i 111 (115)
T d1wpga1 73 ----------------------------PRAVNQDKKNMLFSGTNIA-AGKALGIVATTGVSTEIGKI 111 (115)
T ss_dssp ----------------------------TTCCGGGCTTEECTTCEEE-ECEEEEEEEECGGGSHHHHH
T ss_pred ----------------------------cccccccccceEEeccEEE-eeeEEEEEEEEccccHHHHH
Confidence 1112234567788888776 46799999999999988764
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.27 E-value=1.3e-12 Score=147.56 Aligned_cols=74 Identities=18% Similarity=0.023 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCC--Cceeec
Q 002339 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKT--GTLTCN 429 (934)
Q Consensus 352 ~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKT--GTLT~n 429 (934)
.+..|..++.+.+.++|++||++++++..+++.+| ++++++||+..++|++|+..+.|+||| +|||.|
T Consensus 177 ~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rm----------ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n 246 (472)
T d1wpga4 177 AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSN 246 (472)
T ss_dssp GGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHH----------HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhh
Confidence 35678889999999999999999999999999999 899999999999999999999999998 999999
Q ss_pred ceEEEE
Q 002339 430 QMDFLK 435 (934)
Q Consensus 430 ~m~~~~ 435 (934)
.+.+..
T Consensus 247 ~~~v~~ 252 (472)
T d1wpga4 247 VGEVVC 252 (472)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877643
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.09 E-value=5.7e-11 Score=120.40 Aligned_cols=185 Identities=14% Similarity=0.107 Sum_probs=97.7
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccC----CceEEEEcCCCchhHHHHHHHHHHHhHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQ----GMKQICITALNSDSVGKAAKEAVKDNILMQITN 793 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (934)
.+.+.+.++|++|+++|++++++|||....+..++..+++-.+ ++..+.....................+......
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 5778999999999999999999999999999999988876421 111111111100000000000001111111000
Q ss_pred HHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcC--hhhHHHHHHHHhhc---CCCEEEEEc
Q 002339 794 ASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVS--PKQKALVTRLVKEG---TGKTTLAIG 868 (934)
Q Consensus 794 ~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~--p~qK~~iv~~lk~~---~~~~v~aiG 868 (934)
...... .......+.+.......-.-.++.+++...........+..+. ...|...++.+... ....|+++|
T Consensus 99 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iG 175 (230)
T d1wr8a_ 99 ARTSYT---MPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVG 175 (230)
T ss_dssp CCBCTT---GGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEE
T ss_pred ccceee---cccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeee
Confidence 000000 0111111222221111100011222221111100111222333 35788888877654 246799999
Q ss_pred CChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 869 DGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 869 DG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
||.||++|++.|++||+|++.... ++..||+++...+
T Consensus 176 D~~NDi~ml~~ag~~vav~na~~~-~k~~A~~v~~~~~ 212 (230)
T d1wr8a_ 176 DGENDLDAFKVVGYKVAVAQAPKI-LKENADYVTKKEY 212 (230)
T ss_dssp CSGGGHHHHHHSSEEEECTTSCHH-HHTTCSEECSSCH
T ss_pred cCccHHHHHHHCCeEEEECCCCHH-HHHhCCEEECCCC
Confidence 999999999999999999654433 9999999987643
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=1.7e-10 Score=115.98 Aligned_cols=132 Identities=20% Similarity=0.290 Sum_probs=94.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
+++|++.+.|+.|++.|++++++||.....+.++++.+|+...+ ++.-. .
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~an~-~--------------------------- 131 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANR-L--------------------------- 131 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEEC-E---------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eeeee-e---------------------------
Confidence 47899999999999999999999999999999999999985321 11100 0
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc-CCCEEEEEcCChhhHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG-TGKTTLAIGDGANDVGM 876 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~-~~~~v~aiGDG~ND~~m 876 (934)
.+..+|....... .-....+..|+.+++.++.. ....++++|||.||++|
T Consensus 132 -----------~~~~~G~~~g~~~------------------~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~ 182 (217)
T d1nnla_ 132 -----------KFYFNGEYAGFDE------------------TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEA 182 (217)
T ss_dssp -----------EECTTSCEEEECT------------------TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTT
T ss_pred -----------eeeehhcccccee------------------eeeeeccchHHHHHHHHHhccCccccEEEEeCHhhHHH
Confidence 0000111000000 00003456799999998753 33579999999999999
Q ss_pred HHHcCccEEEccc-chhhHHHhCcEeecCccch
Q 002339 877 IQEADIGIGISGV-EGMQAVMASDFSIAQFRFL 908 (934)
Q Consensus 877 l~~A~vGIam~~~-e~~~a~~~AD~ii~~~~~l 908 (934)
++.||++||+++. ...+.++.||+++.+|..|
T Consensus 183 ~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 183 CPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp TTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred HHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 9999999999653 3345778899999887654
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.08 E-value=6e-11 Score=123.80 Aligned_cols=187 Identities=12% Similarity=0.102 Sum_probs=106.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCc------h---------hHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNS------D---------SVGKAAKEA 782 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~------~---------~~~~~~~~~ 782 (934)
++.+.+.++|++|+++||+++++|||+...+..+.+++++..+...++..+|... . +....+...
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~~ 100 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKL 100 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHHH
Confidence 5778999999999999999999999999999999999998766555554443310 0 001111111
Q ss_pred HHHh-H-------------------HHHHHHHHhhhh-----c---cCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhh
Q 002339 783 VKDN-I-------------------LMQITNASQMIK-----L---ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAV 834 (934)
Q Consensus 783 ~~~~-~-------------------~~~~~~~~~~~~-----~---~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~ 834 (934)
..+. . ............ . .........+.++......-....+...+.....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (271)
T d1rkqa_ 101 SREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 180 (271)
T ss_dssp HHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHEE
T ss_pred HHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcceE
Confidence 1000 0 000000000000 0 0001112233333333222111122222221110
Q ss_pred -ccCceEEEEcChh--hHHHHHHHHhhcC---CCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCc
Q 002339 835 -ECASVICCRVSPK--QKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQF 905 (934)
Q Consensus 835 -~~~~~i~~r~~p~--qK~~iv~~lk~~~---~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~ 905 (934)
......+...+|. .|+..++.+.+.. ...+++||||.||++||+.|+.|++|++.... ++..||++....
T Consensus 181 ~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~-lk~~a~~i~~~~ 256 (271)
T d1rkqa_ 181 VLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPS-VKEVANFVTKSN 256 (271)
T ss_dssp EEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCSEECCCT
T ss_pred EEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHH-HHHhCCEEcCCC
Confidence 0011123445665 6999999887642 35699999999999999999999999654432 899999998753
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.05 E-value=9.7e-10 Score=115.28 Aligned_cols=63 Identities=19% Similarity=0.257 Sum_probs=51.9
Q ss_pred EEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 841 CCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 841 ~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
+..++|. .|+..++.+.+..| ..|++||||.||.+||+.|+.||||++.... ++..||++...
T Consensus 204 ~ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~-~k~~A~~v~~~ 271 (285)
T d1nrwa_ 204 NFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARED-IKSIADAVTLT 271 (285)
T ss_dssp EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHH-HHHHCSEECCC
T ss_pred EEEEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHH-HHHhCCEEcCC
Confidence 4456776 79999998876544 5799999999999999999999999654432 99999999875
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.00 E-value=5.1e-10 Score=116.42 Aligned_cols=65 Identities=15% Similarity=0.151 Sum_probs=52.3
Q ss_pred EEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 841 CCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 841 ~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
+..++|. .|+..++.|.+..| ..|++||||.||++||+.|+.||+|++.... +|+.||+++....
T Consensus 181 ~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~-lk~~A~~v~~~~~ 250 (269)
T d1rlma_ 181 FIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAEN-IKQIARYATDDNN 250 (269)
T ss_dssp EEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHH-HHHHCSEECCCGG
T ss_pred eEEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHH-HHHhCCEEcCCCC
Confidence 4566775 59999988876533 5799999999999999999999999654432 9999999987633
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.96 E-value=2.7e-10 Score=115.25 Aligned_cols=173 Identities=16% Similarity=0.150 Sum_probs=98.7
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCC-------Cch-hH-HHHHHHHHHHh
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL-------NSD-SV-GKAAKEAVKDN 786 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~-------~~~-~~-~~~~~~~~~~~ 786 (934)
+..+.+++.+++++|++.|++++++|||+...+..++...|+.. .++..++. ... .. ..... .
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~---~~i~~~G~~~~~~~~~~~~~~~~~~~~-----~ 89 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNEGTN-----K 89 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSHHHH-----H
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc---eEEeecceEEEeCCccEEEecChHHHH-----H
Confidence 34577899999999999999999999999999999998888643 23322221 000 00 00000 0
Q ss_pred HHHHHHHHHhhh--hccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceE-----EEEcCh--hhHHHHHHHHh
Q 002339 787 ILMQITNASQMI--KLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVI-----CCRVSP--KQKALVTRLVK 857 (934)
Q Consensus 787 ~~~~~~~~~~~~--~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i-----~~r~~p--~qK~~iv~~lk 857 (934)
............ ..............+......... ... .....+ +....| ..|+..++.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~ 160 (225)
T d1l6ra_ 90 FLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRK-----EAE----SRGFVIFYSGYSWHLMNRGEDKAFAVNKLK 160 (225)
T ss_dssp HHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHH-----HHH----TTTEEEEEETTEEEEEETTCSHHHHHHHHH
T ss_pred HHHHHHHhcCcceeecccceeeeeccccCHHHHHHHHH-----HHh----hcCcEEEECCcEEEecCCccchHHHHHHHh
Confidence 000000000000 000011112222233333222211 111 111111 233444 37998888776
Q ss_pred hcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 858 EGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 858 ~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
+..+ ..|++||||.||++|++.|++||||++.... +++.||+++....
T Consensus 161 ~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~-~k~~ad~v~~~~~ 211 (225)
T d1l6ra_ 161 EMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDN-IKAVSDFVSDYSY 211 (225)
T ss_dssp HHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHH-HHHHCSEECSCCT
T ss_pred hhhccchhheeeecCCcchHHHHHHCCeEEEECCCcHH-HHHhCCEEECCCC
Confidence 5433 5699999999999999999999999654332 8999999877644
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.94 E-value=3.7e-10 Score=117.42 Aligned_cols=65 Identities=23% Similarity=0.324 Sum_probs=51.9
Q ss_pred EEEcChh--hHHHHHHHHhhcC---CCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 841 CCRVSPK--QKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 841 ~~r~~p~--qK~~iv~~lk~~~---~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
+..++|. .|+..++.+.+.. ...|++||||.||++||+.|++||+|++.... +++.||+++.+.+
T Consensus 181 ~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~-~k~~A~~i~~~~~ 250 (267)
T d1nf2a_ 181 YLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEK-VKEASDIVTLTNN 250 (267)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHH-HHHHCSEECCCTT
T ss_pred eeeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHH-HHHhCCEEcCCCC
Confidence 3456675 6999998886643 35799999999999999999999999654432 9999999997643
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.88 E-value=7.2e-10 Score=116.01 Aligned_cols=56 Identities=14% Similarity=0.224 Sum_probs=46.2
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 848 QKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 848 qK~~iv~~lk~~~---~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
.|+..++.+.+.. ...|++||||.||.+||+.|++||+|+++... ++..||+++..
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~-~k~~a~~v~~~ 265 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDS-AKSHAKCVLPV 265 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHH-HHHHSSEECSS
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHH-HHHhCCEEECC
Confidence 6887777776543 36899999999999999999999999654432 99999999864
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.86 E-value=2.9e-09 Score=102.05 Aligned_cols=113 Identities=16% Similarity=0.155 Sum_probs=84.1
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCC
Q 002339 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (934)
Q Consensus 725 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (934)
.+|+.|+..|+.+.++||+....+...+.++++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 48999999999999999999999999999888742
Q ss_pred CCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCChhhHHHHHHcC
Q 002339 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEAD 881 (934)
Q Consensus 805 ~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~---~~~~v~aiGDG~ND~~ml~~A~ 881 (934)
++ .....|...++.+.+. ....|+++||+.||.+||+.|+
T Consensus 74 -----------------------------------~~--~~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g 116 (177)
T d1k1ea_ 74 -----------------------------------FF--LGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACG 116 (177)
T ss_dssp -----------------------------------EE--ESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS
T ss_pred -----------------------------------cc--cccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCC
Confidence 11 1223454444443332 3478999999999999999999
Q ss_pred ccEEEcccchhhHHHhCcEeecC------ccchhhhH-hhhchhhh
Q 002339 882 IGIGISGVEGMQAVMASDFSIAQ------FRFLERLL-VVHGHWCY 920 (934)
Q Consensus 882 vGIam~~~e~~~a~~~AD~ii~~------~~~l~~ll-l~~Gr~~~ 920 (934)
+|+++.++... ++..||||+.. .+-+..+| -.+|+|.+
T Consensus 117 ~siap~nA~~~-vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~~~ 161 (177)
T d1k1ea_ 117 TSFAVADAPIY-VKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 161 (177)
T ss_dssp EEEECTTSCHH-HHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred eEEEcCCccHH-HHHhCCEEeCCCCCCchHHHHHHHHHHHCCChHH
Confidence 99999765443 99999999986 22243433 46777654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.77 E-value=1.2e-09 Score=112.89 Aligned_cols=63 Identities=27% Similarity=0.405 Sum_probs=50.8
Q ss_pred EEcChh--hHHHHHHHHhhcC---CCEEEEEcCChhhHHHHHHcCccEEEcc-cchhhHHHhCcEeecCcc
Q 002339 842 CRVSPK--QKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISG-VEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 842 ~r~~p~--qK~~iv~~lk~~~---~~~v~aiGDG~ND~~ml~~A~vGIam~~-~e~~~a~~~AD~ii~~~~ 906 (934)
..+.|. .|+..++.+.+.. ...+++||||.||++||+.|+.||+|.+ .+. +++.||++.....
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~--lk~~A~~vt~~~~ 246 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKED--VKAAADYVTAPID 246 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHHHSSEECCCGG
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHH--HHHhCCEEeCCCC
Confidence 455664 6998888887643 3679999999999999999999999965 444 9999999877533
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.76 E-value=6.9e-08 Score=97.04 Aligned_cols=41 Identities=7% Similarity=0.072 Sum_probs=38.3
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.+.+.++++|++|+++|++++++|||+...+..+..++++-
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 47789999999999999999999999999999999999874
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.71 E-value=1.5e-08 Score=103.02 Aligned_cols=43 Identities=9% Similarity=0.014 Sum_probs=39.1
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.+...+.++++|++|+++|++++++|||+...+..+.+.+++.
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 4556688999999999999999999999999999999999874
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.66 E-value=4.6e-08 Score=96.35 Aligned_cols=130 Identities=18% Similarity=0.136 Sum_probs=87.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
+..++....++.+ +.+.+++++|+.........+...++..............
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------- 121 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc--------------------------
Confidence 4556777777665 5789999999999988888888888754322211111100
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
.........+..+...++.++. ....|+|||||.||++||
T Consensus 122 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~i-~~~eviaiGDg~NDi~Ml 161 (206)
T d1rkua_ 122 ---------------------------------------RVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDSYNDTTML 161 (206)
T ss_dssp ---------------------------------------CEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECSSTTHHHH
T ss_pred ---------------------------------------ccccccccchhhHHHHHHHhcc-cccceEEecCCccCHHHH
Confidence 0112222334445566777775 788999999999999999
Q ss_pred HHcCccEEEcccchhhHHHhCcEeec-CccchhhhHhhh
Q 002339 878 QEADIGIGISGVEGMQAVMASDFSIA-QFRFLERLLVVH 915 (934)
Q Consensus 878 ~~A~vGIam~~~e~~~a~~~AD~ii~-~~~~l~~lll~~ 915 (934)
+.||+||||++.+. -.++++||+.. ++..|...++.+
T Consensus 162 ~~Ag~gIAmna~~~-v~~~~~~~~~~~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 162 SEAHAGILFHAPEN-VIREFPQFPAVHTYEDLKREFLKA 199 (206)
T ss_dssp HHSSEEEEESCCHH-HHHHCTTSCEECSHHHHHHHHHHH
T ss_pred HhCCccEEECCCHH-HHHhCCCceeecCHHHHHHHHHHH
Confidence 99999999955443 25677899764 455576654443
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.57 E-value=1.3e-07 Score=93.18 Aligned_cols=123 Identities=18% Similarity=0.164 Sum_probs=83.4
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
.++.+++.+.++.++..|..+.++||.....+.......++...-...+......
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 128 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK------------------------- 128 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE-------------------------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc-------------------------
Confidence 4788999999999999999999999999988888888777643211111110000
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE--cChhhHHHHHHHHhhc---CCCEEEEEcCCh
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR--VSPKQKALVTRLVKEG---TGKTTLAIGDGA 871 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r--~~p~qK~~iv~~lk~~---~~~~v~aiGDG~ 871 (934)
. ...... ..+..|...+..+... ....++|+|||.
T Consensus 129 -----------~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~ 168 (210)
T d1j97a_ 129 -----------L-----------------------------TGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGA 168 (210)
T ss_dssp -----------E-----------------------------EEEEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSG
T ss_pred -----------c-----------------------------cccccccccccccccchhhhHHHHhcccccceEEecCCc
Confidence 0 000000 1122333333333221 346799999999
Q ss_pred hhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 872 NDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 872 ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
||++|++.||+||||++.+. .+..||+++...+
T Consensus 169 nDi~m~~~ag~~va~na~~~--lk~~Ad~vi~~~d 201 (210)
T d1j97a_ 169 NDISMFKKAGLKIAFCAKPI--LKEKADICIEKRD 201 (210)
T ss_dssp GGHHHHHHCSEEEEESCCHH--HHTTCSEEECSSC
T ss_pred ChHHHHHHCCCCEEECCCHH--HHHhCCEEEcCCC
Confidence 99999999999999966665 8899999997643
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.52 E-value=7.2e-08 Score=96.77 Aligned_cols=135 Identities=12% Similarity=0.146 Sum_probs=90.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.+.|+.|++.|+++.++||-....+..+.+.+|+... +++..
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~---~~an~----------------------------- 122 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR---IYCNH----------------------------- 122 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGG---EEEEE-----------------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccc---eeeee-----------------------------
Confidence 4789999999999999999999999999999999999887532 11100
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
+..++....... .......++...|..|..+++.++. .+..|++|||+.||++|+
T Consensus 123 ------------~~~~~~~~~~~~------------~~~~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iGDs~~Dl~~a 177 (226)
T d2feaa1 123 ------------ASFDNDYIHIDW------------PHSCKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGDSVTDVEAA 177 (226)
T ss_dssp ------------EECSSSBCEEEC------------TTCCCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEECCGGGHHHH
T ss_pred ------------EEEeCCcceecc------------ccccccccccCCHHHHHHHHHHhcC-CCceEEEEeCchhhHHHH
Confidence 000110000000 0000012234678889999999887 788999999999999999
Q ss_pred HHcCccEEEcc-cchhhHHH-hCc-EeecCccchhhh
Q 002339 878 QEADIGIGISG-VEGMQAVM-ASD-FSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGIam~~-~e~~~a~~-~AD-~ii~~~~~l~~l 911 (934)
+.||+++++.+ .+. +.+ ..+ ..+.+|+.+...
T Consensus 178 ~~A~~~~a~~~~~~~--~~~~~~~~~~~~d~~~i~~~ 212 (226)
T d2feaa1 178 KLSDLCFARDYLLNE--CREQNLNHLPYQDFYEIRKE 212 (226)
T ss_dssp HTCSEEEECHHHHHH--HHHTTCCEECCSSHHHHHHH
T ss_pred HHCCEEEEecchHHH--HHHcCCCeeecCCHHHHHHH
Confidence 99999999853 332 322 233 344556655544
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.52 E-value=7.9e-08 Score=97.80 Aligned_cols=179 Identities=12% Similarity=0.129 Sum_probs=92.0
Q ss_pred chHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCC---chhHHHHHHHHHHH----hHHHHHHHH
Q 002339 722 GVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALN---SDSVGKAAKEAVKD----NILMQITNA 794 (934)
Q Consensus 722 ~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~ 794 (934)
+..+++.++++.|+.+.++|||+...+..+.+++++..++ ..+..++.. .+............ +....+...
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~-~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPD-YWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADG 100 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCS-EEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCc-eEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhh
Confidence 3445666678889999999999999999999999986543 222222220 00011111111111 111111111
Q ss_pred Hhhhhc---cCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCce----EEEEcCh--hhHHHHHHHHhhcCC---C
Q 002339 795 SQMIKL---ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASV----ICCRVSP--KQKALVTRLVKEGTG---K 862 (934)
Q Consensus 795 ~~~~~~---~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~----i~~r~~p--~qK~~iv~~lk~~~~---~ 862 (934)
...... .............-...... .+.+...+.......... -+..+.| ..|+..++.+.+..| .
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~ 179 (244)
T d1s2oa1 101 FEALKPQSPLEQNPWKISYHLDPQACPTV-IDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPS 179 (244)
T ss_dssp CTTEEECCGGGCBTTBEEEEECTTSCTHH-HHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGG
T ss_pred cccccccChhhhcceEEEEeccccccHHH-HHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChh
Confidence 100000 00111111211111111111 112222222211111000 1223333 479999998876544 5
Q ss_pred EEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeec
Q 002339 863 TTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIA 903 (934)
Q Consensus 863 ~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~ 903 (934)
.|+++|||.||.+||+.|+.||+|++.+.. +++.||.+..
T Consensus 180 ~~v~~GD~~ND~~Ml~~~~~~vav~na~~~-lk~~a~~~~~ 219 (244)
T d1s2oa1 180 QTLVCGDSGNDIGLFETSARGVIVRNAQPE-LLHWYDQWGD 219 (244)
T ss_dssp GEEEEECSGGGHHHHTSSSEEEECTTCCHH-HHHHHHHHCC
T ss_pred hEEEEcCCCCCHHHHhhCCcEEEeCCCCHH-HHHHhhcccc
Confidence 699999999999999999999999654433 7888885443
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.49 E-value=6.4e-08 Score=97.05 Aligned_cols=66 Identities=18% Similarity=0.274 Sum_probs=49.6
Q ss_pred EEEcChh--hHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccchhhh
Q 002339 841 CCRVSPK--QKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 841 ~~r~~p~--qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+..++|. .|+..++.+.. ...+++|||+.||++||+.|+.|++|...+ ++.+|+|.+.+-..+..+
T Consensus 150 ~idi~p~g~~Kg~al~~l~~--~~~~i~~GDs~ND~~Mf~~~~~~~av~~g~---~~~~A~~~~~~~~ev~~~ 217 (229)
T d1u02a_ 150 IIELRVPGVNKGSAIRSVRG--ERPAIIAGDDATDEAAFEANDDALTIKVGE---GETHAKFHVADYIEMRKI 217 (229)
T ss_dssp EEEEECTTCCHHHHHHHHHT--TSCEEEEESSHHHHHHHHTTTTSEEEEESS---SCCCCSEEESSHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHhc--cccceeecCCCChHHHHhccCCeEEEEeCC---CCccCeEEcCCHHHHHHH
Confidence 4556665 69999999986 357899999999999999998888774222 245899999875444333
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.43 E-value=9.8e-08 Score=96.43 Aligned_cols=61 Identities=15% Similarity=0.256 Sum_probs=49.1
Q ss_pred EEcChh--hHHHHHHHHhhcCCCEEEEEcC----ChhhHHHHHHcC-ccEEEcccchhhHHHhCcEeec
Q 002339 842 CRVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEAD-IGIGISGVEGMQAVMASDFSIA 903 (934)
Q Consensus 842 ~r~~p~--qK~~iv~~lk~~~~~~v~aiGD----G~ND~~ml~~A~-vGIam~~~e~~~a~~~AD~ii~ 903 (934)
..++|. .|+..++.|.+.....|++||| |.||.+||+.|+ .|+||++.+.. ++..+|++++
T Consensus 177 lei~~~~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~-~k~~~~~~~~ 244 (244)
T d2fuea1 177 FDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT-VQRCREIFFP 244 (244)
T ss_dssp EEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH-HHHHHHHHCT
T ss_pred ceecchhccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHH-HHHHHHhcCC
Confidence 355554 6999999997756789999999 569999999998 69999766553 8888888763
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.02 E-value=1.6e-06 Score=87.09 Aligned_cols=57 Identities=25% Similarity=0.367 Sum_probs=42.7
Q ss_pred EcChh--hHHHHHHHHhhcCCCEEEEEcC----ChhhHHHHHHcC-ccEEEcccchhhHHHhCcEe
Q 002339 843 RVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEAD-IGIGISGVEGMQAVMASDFS 901 (934)
Q Consensus 843 r~~p~--qK~~iv~~lk~~~~~~v~aiGD----G~ND~~ml~~A~-vGIam~~~e~~~a~~~AD~i 901 (934)
.++|. +|+..++.|.......|++||| |.||++||+.|+ .|+++++.+. +++.++.+
T Consensus 178 ei~~~~vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~--~~~~~~~l 241 (243)
T d2amya1 178 DVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED--TRRICELL 241 (243)
T ss_dssp EEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH--HHHHHHHH
T ss_pred eeeccccCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH--HHHHHHHH
Confidence 34554 6988888887656689999999 889999999998 6888877666 67666543
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.63 E-value=5.1e-05 Score=74.82 Aligned_cols=124 Identities=18% Similarity=0.154 Sum_probs=84.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++++.++.|++.|++++++||.....+..+.+.+||...-..++......
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 148 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLP-------------------------- 148 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSS--------------------------
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccc--------------------------
Confidence 467999999999999999999999999999999999999865322221100000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
...-.|+--..+.+.++- ....+++|||..+|+.+-
T Consensus 149 -------------------------------------------~~kp~p~~~~~~~~~~~~-~~~~~~~igD~~~Di~~A 184 (224)
T d2hsza1 149 -------------------------------------------EIKPHPAPFYYLCGKFGL-YPKQILFVGDSQNDIFAA 184 (224)
T ss_dssp -------------------------------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEESSHHHHHHH
T ss_pred -------------------------------------------cccccchhhHHHHHHhhh-hhhccchhcCcHHHHHHH
Confidence 000112222233444443 567899999999999999
Q ss_pred HHcCc-cEEEc-c--cchhhHHHhCcEeecCccchhhh
Q 002339 878 QEADI-GIGIS-G--VEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~v-GIam~-~--~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.||+ .|++. | .........+|+++.++..|.++
T Consensus 185 ~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 185 HSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp HHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHh
Confidence 99997 55663 2 11111334689999998888776
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.38 E-value=0.00024 Score=69.53 Aligned_cols=120 Identities=13% Similarity=0.088 Sum_probs=81.0
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhh
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMI 798 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (934)
+.|++.++|+.|+++|+++.++||.....+..+.+.+|+...-..++..+
T Consensus 89 ~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~------------------------------ 138 (218)
T d1te2a_ 89 LLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAE------------------------------ 138 (218)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECT------------------------------
T ss_pred ccchHHHHHHHhhhcccccccccccccccccccccccccccccccccccc------------------------------
Confidence 45999999999999999999999999999999999999964322222111
Q ss_pred hccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHH
Q 002339 799 KLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQ 878 (934)
Q Consensus 799 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~ 878 (934)
... .+.-.|+-=..+++.+.- ....+++|||+.+|+.|-+
T Consensus 139 -----------------~~~----------------------~~Kp~~~~~~~~~~~l~~-~~~~~l~igD~~~di~aA~ 178 (218)
T d1te2a_ 139 -----------------KLP----------------------YSKPHPQVYLDCAAKLGV-DPLTCVALEDSVNGMIASK 178 (218)
T ss_dssp -----------------TSS----------------------CCTTSTHHHHHHHHHHTS-CGGGEEEEESSHHHHHHHH
T ss_pred -----------------ccc----------------------cchhhHHHHHHHHHHcCC-CchhcEEEeeCHHHHHHHH
Confidence 000 000011111233444432 4578999999999999999
Q ss_pred HcCccE-EEcccc--hhhHHHhCcEeecCccch
Q 002339 879 EADIGI-GISGVE--GMQAVMASDFSIAQFRFL 908 (934)
Q Consensus 879 ~A~vGI-am~~~e--~~~a~~~AD~ii~~~~~l 908 (934)
.|++.. ++.+.+ .......||+++.++..|
T Consensus 179 ~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 179 AARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp HTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred HcCCEEEEECCCCCccchhhcCCCEEECChhhC
Confidence 999754 553321 111335689999998765
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.38 E-value=0.00023 Score=70.39 Aligned_cols=122 Identities=16% Similarity=0.124 Sum_probs=80.7
Q ss_pred cCCCchHHHHHHHHhcC-CeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 718 KLQKGVPQCIDKLAQAG-LKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aG-Ikv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
++-||+.++++.|++.| +++.++||.....+..+.+..|+...-..++
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~------------------------------- 139 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGA------------------------------- 139 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEE-------------------------------
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccc-------------------------------
Confidence 44689999999999987 8999999999999999999999864321111
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhH----HHHHHHHhh--cCCCEEEEEcCC
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQK----ALVTRLVKE--GTGKTTLAIGDG 870 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK----~~iv~~lk~--~~~~~v~aiGDG 870 (934)
.+... ..+..+ ...++.+.. ...+.++||||+
T Consensus 140 ----------------~~~~~--------------------------~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~ 177 (228)
T d2hcfa1 140 ----------------FADDA--------------------------LDRNELPHIALERARRMTGANYSPSQIVIIGDT 177 (228)
T ss_dssp ----------------CTTTC--------------------------SSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESS
T ss_pred ----------------ccccc--------------------------ccccchhHHHHHHhhhhcccCCChhHheeecCC
Confidence 11000 011111 111222221 123679999999
Q ss_pred hhhHHHHHHcCcc-EEEc-c-cchhh-HHHhCcEeecCccchhhhH
Q 002339 871 ANDVGMIQEADIG-IGIS-G-VEGMQ-AVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 871 ~ND~~ml~~A~vG-Iam~-~-~e~~~-a~~~AD~ii~~~~~l~~ll 912 (934)
.+|+.|-+.|++. |++. | .+..+ ....||+++.++..|..+|
T Consensus 178 ~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l 223 (228)
T d2hcfa1 178 EHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVL 223 (228)
T ss_dssp HHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred hHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHH
Confidence 9999999999975 3442 3 22222 2235899999999887774
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.32 E-value=0.00028 Score=71.93 Aligned_cols=48 Identities=15% Similarity=0.297 Sum_probs=43.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEE
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQI 765 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i 765 (934)
+||+|+++.++.|++.|+++.++||--...+.++++++|+..++..++
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~ 182 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVV 182 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEE
Confidence 489999999999999999999999999999999999999876654444
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.24 E-value=7.7e-05 Score=67.40 Aligned_cols=107 Identities=16% Similarity=0.256 Sum_probs=75.0
Q ss_pred cCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccch
Q 002339 551 AESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADS 630 (934)
Q Consensus 551 ~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~ 630 (934)
+.||..+|++++|++.+....... .+.-...++|+...+...+.+ +| ..+..|++.
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~g~~~---~g--~~v~~G~~~ 84 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERDV-------------------QSLHATFVPFTAQSRMSGINI---DN--RMIRKGSVD 84 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCCT-------------------TTTTCEEEEEETTTTEEEEEE---TT--EEEEEECHH
T ss_pred CCchHHHHHHHHHHHhcCCCcccc-------------------ccccccccccccccceEEEEE---CC--EEEEecHHH
Confidence 689999999999997653321100 001111234444444333322 23 467789998
Q ss_pred hhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEE
Q 002339 631 IIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILV 710 (934)
Q Consensus 631 ~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~l 710 (934)
.|...+...+...+..+...++.++.+|.+++.+|. |-+++
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~---------------------------------------d~~~~ 125 (136)
T d2a29a1 85 AIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVE---------------------------------------GSRVL 125 (136)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEE---------------------------------------TTEEE
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEE---------------------------------------CCEEE
Confidence 888777766556778889999999999999999993 67899
Q ss_pred EeeeecccCC
Q 002339 711 GATAVEDKLQ 720 (934)
Q Consensus 711 G~i~i~D~lr 720 (934)
|++++.|++|
T Consensus 126 G~i~l~D~iK 135 (136)
T d2a29a1 126 GVIALKDIVK 135 (136)
T ss_dssp EEEEEEESSC
T ss_pred EEEEEEeecC
Confidence 9999999986
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.21 E-value=0.00062 Score=66.01 Aligned_cols=119 Identities=15% Similarity=0.127 Sum_probs=81.0
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-++.+++.+.++.++..| ++.++|+.....+..+...+|+...-..+
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v-------------------------------- 129 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGI-------------------------------- 129 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccccc--------------------------------
Confidence 357799999999998775 89999999999999999999986432222
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCChhh
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGAND 873 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~---~~~~v~aiGDG~ND 873 (934)
+.+.-.+..|...+..+.+. ....+++|||+.+|
T Consensus 130 -------------------------------------------~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~D 166 (210)
T d2ah5a1 130 -------------------------------------------YGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFD 166 (210)
T ss_dssp -------------------------------------------EEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHH
T ss_pred -------------------------------------------ccccccccccccccchhhhhhhcccccceeecCCHHH
Confidence 22222233333333333222 34689999999999
Q ss_pred HHHHHHcCc-cEEEc-cc-chhhHH-HhCcEeecCccchhhh
Q 002339 874 VGMIQEADI-GIGIS-GV-EGMQAV-MASDFSIAQFRFLERL 911 (934)
Q Consensus 874 ~~ml~~A~v-GIam~-~~-e~~~a~-~~AD~ii~~~~~l~~l 911 (934)
+.|-+.|++ .|++. |. ...+.. ..+|+++.++..|...
T Consensus 167 i~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~ 208 (210)
T d2ah5a1 167 MLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp HHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred HHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 999999998 66773 32 222233 3489999887765543
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.04 E-value=0.0004 Score=69.95 Aligned_cols=42 Identities=26% Similarity=0.241 Sum_probs=38.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.+++.++++.|++.|+++.++||.....+..+.+..|+..
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~ 140 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG 140 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcc
Confidence 578999999999999999999999999999998888888753
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.85 E-value=0.00061 Score=65.81 Aligned_cols=118 Identities=16% Similarity=0.186 Sum_probs=75.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.++++.|++.|+++.++|+... .+..+.+..|+...-..
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~---------------------------------- 126 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTE---------------------------------- 126 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEE----------------------------------
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccccc----------------------------------
Confidence 4679999999999999999999998665 45667777887542111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
++.+... ....-.|+-=..+++.+.- ....+++|||+.+|+.+-
T Consensus 127 -------------i~~s~~~----------------------~~~Kp~~~~~~~~~~~~~~-~p~~~l~VgD~~~Di~~A 170 (204)
T d2go7a1 127 -------------ILTSQSG----------------------FVRKPSPEAATYLLDKYQL-NSDNTYYIGDRTLDVEFA 170 (204)
T ss_dssp -------------EECGGGC----------------------CCCTTSSHHHHHHHHHHTC-CGGGEEEEESSHHHHHHH
T ss_pred -------------ccccccc----------------------cccchhHHHHHHHHHHhCC-CCceEEEEeCCHHHHHHH
Confidence 1111000 0000122222344455543 457899999999999999
Q ss_pred HHcCccE-EEcccchhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIGI-GISGVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGI-am~~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|++.. ++.... ..+|+.+.+...|.++
T Consensus 171 ~~~G~~~i~v~~~~-----~~~~~~~~~~~dl~~l 200 (204)
T d2go7a1 171 QNSGIQSINFLEST-----YEGNHRIQALADISRI 200 (204)
T ss_dssp HHHTCEEEESSCCS-----CTTEEECSSTTHHHHH
T ss_pred HHcCCeEEEEcCCC-----CCcCeecCCHHHHHHH
Confidence 9999854 453221 2467777666666555
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.84 E-value=0.0014 Score=61.98 Aligned_cols=60 Identities=17% Similarity=0.220 Sum_probs=41.9
Q ss_pred HHHHHHhhcCCCEEEEEcCChhhHHHHHHcCcc--EEE-cccch-hhHHHhCcEeecCccchhhh
Q 002339 851 LVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG--IGI-SGVEG-MQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 851 ~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vG--Iam-~~~e~-~~a~~~AD~ii~~~~~l~~l 911 (934)
.+++.+.- ....++||||..+|+.|=+.|+++ +.+ .|... ......||+++.++..+..+
T Consensus 116 ~~~~~~~i-~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 116 SARDYLHI-DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp HHHHHHTB-CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred chhhhccc-ccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 33444432 446799999999999999999995 344 34321 22455699999998887766
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.69 E-value=0.00068 Score=65.65 Aligned_cols=123 Identities=15% Similarity=0.161 Sum_probs=80.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.++++.|+ +++++.++|+.....+..+.+.+|+...-..
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 126 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRMAV---------------------------------- 126 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGEEE----------------------------------
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccccccc----------------------------------
Confidence 35699999999997 5799999999999999999999888542111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
++.+.... ...-.|+--..+++.+.- ....+++|||+.+|+.+-
T Consensus 127 -------------i~~~~~~~----------------------~~KP~p~~~~~~~~~~~~-~~~~~l~VgDs~~Di~~a 170 (207)
T d2hdoa1 127 -------------TISADDTP----------------------KRKPDPLPLLTALEKVNV-APQNALFIGDSVSDEQTA 170 (207)
T ss_dssp -------------EECGGGSS----------------------CCTTSSHHHHHHHHHTTC-CGGGEEEEESSHHHHHHH
T ss_pred -------------cccccccc----------------------cchhhhhhhcccccceee-eccceeEecCCHHHHHHH
Confidence 11111000 000112222334444432 346799999999999999
Q ss_pred HHcCccEEE--cccchhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIGIGI--SGVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGIam--~~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|++.... .|.........+|+++.++..|..+
T Consensus 171 ~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~l 206 (207)
T d2hdoa1 171 QAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILEL 206 (207)
T ss_dssp HHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGG
T ss_pred HHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHhh
Confidence 999987643 2433322456789998776665544
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.54 E-value=0.0025 Score=62.58 Aligned_cols=121 Identities=14% Similarity=0.141 Sum_probs=79.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.++++.|+ +|++++++|+-.......+.+.+|+...=..++.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~------------------------------- 147 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITT------------------------------- 147 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEE-------------------------------
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccccccc-------------------------------
Confidence 46799999999996 6899999999888888888888888542111111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhH--HHHHHHHhhcCCCEEEEEcCC-hhhH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQK--ALVTRLVKEGTGKTTLAIGDG-ANDV 874 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK--~~iv~~lk~~~~~~v~aiGDG-~ND~ 874 (934)
+.... ..-|.-. ..+++.+.- ....+++|||. .+|+
T Consensus 148 ----------------s~~~~------------------------~~KP~~~~~~~~~~~l~~-~p~~~l~vgD~~~~Di 186 (230)
T d1x42a1 148 ----------------SEEAG------------------------FFKPHPRIFELALKKAGV-KGEEAVYVGDNPVKDC 186 (230)
T ss_dssp ----------------HHHHT------------------------BCTTSHHHHHHHHHHHTC-CGGGEEEEESCTTTTH
T ss_pred ----------------ccccc------------------------ccchhhHHHHHHHhhhcc-cccccceeecCcHhHH
Confidence 00000 0112111 123333332 44679999997 5899
Q ss_pred HHHHHcCccE-EEc-ccchhhHHHhCcEeecCccchhhh
Q 002339 875 GMIQEADIGI-GIS-GVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 875 ~ml~~A~vGI-am~-~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
.+-+.||+-. .+. +.+..+....+|+++.+++.|..+
T Consensus 187 ~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~ 225 (230)
T d1x42a1 187 GGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKI 225 (230)
T ss_dssp HHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHH
T ss_pred HHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHH
Confidence 9999999754 443 222233566799999998887766
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.25 E-value=0.0067 Score=55.97 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=30.7
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCH-HHHHHHHHHcCc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKM-ETAINIGFACSL 757 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~-~ta~~ia~~~gi 757 (934)
++.|++.++|+.|+++|+++.++|+-+. ..+..+-+..++
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~ 86 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDL 86 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccc
Confidence 5789999999999999999999997554 334444444444
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.21 E-value=0.0015 Score=59.31 Aligned_cols=31 Identities=23% Similarity=0.249 Sum_probs=28.4
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHH
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ 746 (934)
++++.|++.+.++.|+++|++++++||++..
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~ 64 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESG 64 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHH
Confidence 5788999999999999999999999999753
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.18 E-value=0.0039 Score=61.51 Aligned_cols=44 Identities=14% Similarity=0.177 Sum_probs=38.6
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
.-.+.|++.+++++|+++|+++.++|+............+|+..
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~ 168 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGD 168 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBC
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcch
Confidence 44568999999999999999999999999998888888888743
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.03 E-value=0.013 Score=58.09 Aligned_cols=39 Identities=8% Similarity=0.154 Sum_probs=31.8
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (934)
++.=+++.++|++|+++|++++++|+....+...++..+
T Consensus 17 ~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 17 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 333478999999999999999999988877777776654
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.99 E-value=0.0061 Score=57.54 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=33.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
.+.+|+++.|+.|++.|++++++|+.+... ..+.+.+++..
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~ 119 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIAA 119 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCGG
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhcccc
Confidence 467999999999999999999999976654 45667777653
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.95 E-value=0.0065 Score=60.08 Aligned_cols=117 Identities=15% Similarity=0.080 Sum_probs=78.1
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhh
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMI 798 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (934)
+-|++.++++.|+ .|++++++|+..........+.+|+...-..++..
T Consensus 110 ~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s------------------------------- 157 (247)
T d2gfha1 110 LADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIG------------------------------- 157 (247)
T ss_dssp CCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEG-------------------------------
T ss_pred cCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccccccccc-------------------------------
Confidence 5699999999998 58999999999988888888889986432222110
Q ss_pred hccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhH------HHHHHHHhhcCCCEEEEEcCCh-
Q 002339 799 KLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQK------ALVTRLVKEGTGKTTLAIGDGA- 871 (934)
Q Consensus 799 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK------~~iv~~lk~~~~~~v~aiGDG~- 871 (934)
...+..| ..+.+.+.- ....+++|||..
T Consensus 158 --------------------------------------------~~~~~~KP~p~~~~~~~~~~~~-~~~~~l~iGD~~~ 192 (247)
T d2gfha1 158 --------------------------------------------GEQKEEKPAPSIFYHCCDLLGV-QPGDCVMVGDTLE 192 (247)
T ss_dssp --------------------------------------------GGSSSCTTCHHHHHHHHHHHTC-CGGGEEEEESCTT
T ss_pred --------------------------------------------cccccchhhhhhHHHHHHHhhc-CHHhcceeccChH
Confidence 0011111 122333332 345799999995
Q ss_pred hhHHHHHHcCcc-EEEc-c-c-chhhHHHhCcEeecCccchhhhH
Q 002339 872 NDVGMIQEADIG-IGIS-G-V-EGMQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 872 ND~~ml~~A~vG-Iam~-~-~-e~~~a~~~AD~ii~~~~~l~~ll 912 (934)
+|+.+-+.||+. +... . . ........+|+++.+...|..+|
T Consensus 193 ~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll 237 (247)
T d2gfha1 193 TDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALL 237 (247)
T ss_dssp THHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHH
T ss_pred hHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHH
Confidence 899999999996 5442 2 1 11112345899999988877774
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=95.94 E-value=0.04 Score=54.36 Aligned_cols=50 Identities=14% Similarity=0.151 Sum_probs=35.3
Q ss_pred EeeeecccCCCchHHHHHHHHhcCCeEEEEcC---CCHHHHHHHHHHcCcccC
Q 002339 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTG---DKMETAINIGFACSLLRQ 760 (934)
Q Consensus 711 G~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTG---D~~~ta~~ia~~~gi~~~ 760 (934)
|++.-.+++=+++.++|+.|+++|++++++|+ +........-+++|+.-+
T Consensus 12 GTL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~ 64 (250)
T d2c4na1 12 GVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64 (250)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCC
T ss_pred CeeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccccc
Confidence 33334455558999999999999999999984 445555555556787433
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=95.49 E-value=0.14 Score=50.41 Aligned_cols=60 Identities=18% Similarity=0.238 Sum_probs=40.4
Q ss_pred HHHHHHhhcCCCEEEEEcCCh-hhHHHHHHcCc-cEEE-cccc-hhhHHH---hCcEeecCccchhhh
Q 002339 851 LVTRLVKEGTGKTTLAIGDGA-NDVGMIQEADI-GIGI-SGVE-GMQAVM---ASDFSIAQFRFLERL 911 (934)
Q Consensus 851 ~iv~~lk~~~~~~v~aiGDG~-ND~~ml~~A~v-GIam-~~~e-~~~a~~---~AD~ii~~~~~l~~l 911 (934)
.+.+.+.- ....++||||.. +|+.+-+.|++ +|.+ +|.. ...... .+||++.+...|.++
T Consensus 193 ~a~~~l~~-~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 193 VISEKFGV-PKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp HHHHHHTC-CGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred HHHhhhcc-CchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 44444443 457899999995 69999999997 6666 3422 111222 359999987777666
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.22 E-value=0.017 Score=54.57 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=33.5
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCH----HHHHHHHHHcCccc
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKM----ETAINIGFACSLLR 759 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~----~ta~~ia~~~gi~~ 759 (934)
+.+++.+.++.+++.|++|+.+|||.. .|+.++.+.+|+-.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~ 131 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA 131 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCc
Confidence 457999999999999999999999974 36666666677743
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.54 E-value=0.024 Score=54.49 Aligned_cols=124 Identities=14% Similarity=0.122 Sum_probs=80.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
.+.+++.++++.+++.|+++.++|+-....+.......++...-..++......
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~-------------------------- 146 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQ-------------------------- 146 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGT--------------------------
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeee--------------------------
Confidence 456899999999999999999999999888888888777764332222111000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
...-.|+-=..+++.+.- ....+++|||...|+.+=
T Consensus 147 -------------------------------------------~~KP~p~~~~~~~~~~g~-~p~e~l~VgD~~~Di~~A 182 (220)
T d1zrna_ 147 -------------------------------------------VYKPDNRVYELAEQALGL-DRSAILFVASNAWDATGA 182 (220)
T ss_dssp -------------------------------------------CCTTSHHHHHHHHHHHTS-CGGGEEEEESCHHHHHHH
T ss_pred -------------------------------------------ccccHHHHHHHHHHHhCC-CCceEEEEecChHhHHHH
Confidence 000111111233344432 457899999999999999
Q ss_pred HHcCccE-EEc--ccchhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIGI-GIS--GVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGI-am~--~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.||+-. .+. +.........+|+++.+++.|..|
T Consensus 183 ~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 183 RYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp HHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred HHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHhh
Confidence 9999764 342 222222345589999887666554
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=94.23 E-value=0.053 Score=51.78 Aligned_cols=26 Identities=23% Similarity=0.339 Sum_probs=23.7
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCC
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGD 743 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD 743 (934)
++-|++.++|+.|+++|+++.++|..
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred EecccHHHHHHHHHhhCCeEEEeccc
Confidence 46799999999999999999999964
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=93.54 E-value=0.049 Score=52.22 Aligned_cols=42 Identities=17% Similarity=0.119 Sum_probs=34.8
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
..++-|++.+.++.|++.|+++.++|+... +.......|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 456789999999999999999999999754 466677777754
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=93.42 E-value=0.16 Score=49.84 Aligned_cols=57 Identities=14% Similarity=0.175 Sum_probs=38.0
Q ss_pred HHHHHHHhhcCCCEEEEEcCChh-hHHHHHHcCc-cEEE-cccc-hhhHHHh---CcEeecCccc
Q 002339 850 ALVTRLVKEGTGKTTLAIGDGAN-DVGMIQEADI-GIGI-SGVE-GMQAVMA---SDFSIAQFRF 907 (934)
Q Consensus 850 ~~iv~~lk~~~~~~v~aiGDG~N-D~~ml~~A~v-GIam-~~~e-~~~a~~~---AD~ii~~~~~ 907 (934)
..+.+.+.- ....++||||..+ |+.+-++|++ +|.+ +|.. ..+.... .|+++.++..
T Consensus 187 ~~al~~l~i-~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e 250 (253)
T d1wvia_ 187 NKALDRLGV-KRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAE 250 (253)
T ss_dssp HHHHHHHTS-CGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGG
T ss_pred eehhhhccc-cccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHH
Confidence 445555543 4578999999976 9999999998 7777 3421 1112222 4999887553
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.21 E-value=0.056 Score=51.86 Aligned_cols=123 Identities=15% Similarity=0.178 Sum_probs=76.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
.+.+++.+.+++|+ .+..++|+-....+..+-..+|+...-...+.
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~------------------------------- 130 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPHIY------------------------------- 130 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTCEE-------------------------------
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccceeec-------------------------------
Confidence 46788888887775 56678999999999999999988653211110
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhH--HHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQK--ALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK--~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
.+.... ..+..|... ..+.+.+.- ..+.+++|||+.+|+.
T Consensus 131 ---------------~~~~~~----------------------~~~~KP~~~~~~~~~~~l~~-~p~~~l~vgDs~~dv~ 172 (222)
T d2fdra1 131 ---------------SAKDLG----------------------ADRVKPKPDIFLHGAAQFGV-SPDRVVVVEDSVHGIH 172 (222)
T ss_dssp ---------------EHHHHC----------------------TTCCTTSSHHHHHHHHHHTC-CGGGEEEEESSHHHHH
T ss_pred ---------------cccccc----------------------ccccccCHHHHHHHHHhhCC-CCceEEEEcCCHHHHH
Confidence 000000 000122221 233333432 4578999999999999
Q ss_pred HHHHcCcc-EEEcccc------hhhHH-HhCcEeecCccchhhhH
Q 002339 876 MIQEADIG-IGISGVE------GMQAV-MASDFSIAQFRFLERLL 912 (934)
Q Consensus 876 ml~~A~vG-Iam~~~e------~~~a~-~~AD~ii~~~~~l~~ll 912 (934)
+=+.|++- |++.+.. ..... ..||+++.+++.|..+|
T Consensus 173 aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 173 GARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp HHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred HHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 99999974 5664321 11122 24999999998887663
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=91.92 E-value=0.083 Score=48.04 Aligned_cols=26 Identities=31% Similarity=0.455 Sum_probs=23.7
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCC
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGD 743 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD 743 (934)
++-|++.++|+.|+++|++++++|..
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 45689999999999999999999975
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=86.88 E-value=0.96 Score=43.16 Aligned_cols=42 Identities=19% Similarity=0.171 Sum_probs=34.0
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccC
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQ 760 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~ 760 (934)
.++-+++.+++++|+ |+++.++|+.+...+..+-...|+...
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~ 133 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS 133 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccc
Confidence 356789999999885 789999999998888888878877543
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=86.77 E-value=0.17 Score=48.07 Aligned_cols=37 Identities=8% Similarity=0.140 Sum_probs=28.0
Q ss_pred HHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCc-cEEEc
Q 002339 850 ALVTRLVKEGTGKTTLAIGDGANDVGMIQEADI-GIGIS 887 (934)
Q Consensus 850 ~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~v-GIam~ 887 (934)
..+++.+.- ....++||||...|+.+-+.||+ +|.+.
T Consensus 164 ~~~~~~~~v-~p~~~l~IgD~~~Di~~A~~aG~~ti~V~ 201 (222)
T d1cr6a1 164 NFLLDTLKA-KPNEVVFLDDFGSNLKPARDMGMVTILVH 201 (222)
T ss_dssp HHHHHHHTS-CTTSEEEEESSSTTTHHHHHHTCEEEECC
T ss_pred HHHHHHhCC-CcceEEEEECCHHHHHHHHHcCCEEEEEC
Confidence 344555553 55679999999999999999997 56663
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.21 E-value=0.21 Score=47.18 Aligned_cols=28 Identities=18% Similarity=0.262 Sum_probs=24.5
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHH
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ 746 (934)
+.+++.+.+..|++.|++++++|+....
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~ 127 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLD 127 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred CCccHHHHHHHHHhccCccccccccchh
Confidence 5789999999999999999999975443
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=85.83 E-value=0.52 Score=44.35 Aligned_cols=59 Identities=27% Similarity=0.332 Sum_probs=43.2
Q ss_pred hhHHHHHHHHhhcCC-CEEEEEcCChhhHHHHHHcC----ccEEEcccchhhHHHhCcEeecCccc
Q 002339 847 KQKALVTRLVKEGTG-KTTLAIGDGANDVGMIQEAD----IGIGISGVEGMQAVMASDFSIAQFRF 907 (934)
Q Consensus 847 ~qK~~iv~~lk~~~~-~~v~aiGDG~ND~~ml~~A~----vGIam~~~e~~~a~~~AD~ii~~~~~ 907 (934)
..|+.+++..-...+ ...+.+||+..|+.||+.|. +.|+.+|++- +...||+++.+-+.
T Consensus 184 g~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Y--al~eA~VaiiS~~~ 247 (308)
T d1y8aa1 184 GEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIISPTA 247 (308)
T ss_dssp HHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEECSST
T ss_pred chhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccc--cccccceEEeccch
Confidence 456666665543222 33589999999999999984 4445578888 99999999988655
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=83.46 E-value=1.9 Score=35.87 Aligned_cols=77 Identities=22% Similarity=0.244 Sum_probs=48.1
Q ss_pred cCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccch
Q 002339 551 AESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADS 630 (934)
Q Consensus 551 ~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~ 630 (934)
+.||...|+++++++.+..+...+. +.. ..|++. +. ..++ =|.+.
T Consensus 26 S~HPlA~AIv~~a~~~~~~~~~~~~--~~~-----~~G~Gi-----------------------~g--~~v~---vG~~~ 70 (113)
T d2b8ea2 26 SEHPIAEAIVKKALEHGIELGEPEK--VEV-----IAGEGV-----------------------VA--DGIL---VGNKR 70 (113)
T ss_dssp CCSHHHHHHHHHHHTTTCCCCCCSC--EEE-----ETTTEE-----------------------EE--TTEE---EECHH
T ss_pred CCCchHHHHHHHHHHhcCCCCcccc--cee-----eccceE-----------------------Ee--EEEE---ECcHH
Confidence 6899999999999988765433111 000 011110 00 1222 27776
Q ss_pred hhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEE
Q 002339 631 IIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAY 666 (934)
Q Consensus 631 ~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~ 666 (934)
.+.+. +-..++.+...++.+..+|..++.+|.
T Consensus 71 ~~~~~----~~~~~~~~~~~~~~~~~~G~T~v~va~ 102 (113)
T d2b8ea2 71 LMEDF----GVAVSNEVELALEKLEREAKTAVIVAR 102 (113)
T ss_dssp HHHHT----TCCCCHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHhc----CCCCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 66442 223566788899999999999999994
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