Citrus Sinensis ID: 002383
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 929 | 2.2.26 [Sep-21-2011] | |||||||
| P34098 | 1010 | Lysosomal alpha-mannosida | yes | no | 0.940 | 0.865 | 0.399 | 0.0 | |
| Q8VHC8 | 1007 | Lysosomal alpha-mannosida | yes | no | 0.908 | 0.838 | 0.411 | 0.0 | |
| O09159 | 1013 | Lysosomal alpha-mannosida | yes | no | 0.947 | 0.868 | 0.398 | 0.0 | |
| O00754 | 1011 | Lysosomal alpha-mannosida | yes | no | 0.919 | 0.844 | 0.410 | 0.0 | |
| Q60HE9 | 1012 | Lysosomal alpha-mannosida | N/A | no | 0.919 | 0.843 | 0.409 | 0.0 | |
| O46432 | 1007 | Lysosomal alpha-mannosida | N/A | no | 0.916 | 0.845 | 0.407 | 0.0 | |
| Q29451 | 999 | Lysosomal alpha-mannosida | yes | no | 0.923 | 0.858 | 0.403 | 0.0 | |
| P27046 | 1150 | Alpha-mannosidase 2 OS=Mu | no | no | 0.790 | 0.638 | 0.283 | 5e-82 | |
| Q16706 | 1144 | Alpha-mannosidase 2 OS=Ho | no | no | 0.794 | 0.645 | 0.285 | 1e-81 | |
| Q24451 | 1108 | Alpha-mannosidase 2 OS=Dr | no | no | 0.800 | 0.671 | 0.287 | 2e-79 |
| >sp|P34098|MANA_DICDI Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA PE=1 SV=2 | Back alignment and function desciption |
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Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/953 (39%), Positives = 532/953 (55%), Gaps = 79/953 (8%)
Query: 7 LVVVLFLCLLCVESKYMMYN----TSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSN 62
L+ LFL + + K N + + +NVH+V H+HDDVGWLKTVD+YY GSN
Sbjct: 9 LIFCLFLIINEINGKKTKINDIKKSKPKLSSTLLNVHIVAHTHDDVGWLKTVDEYYYGSN 68
Query: 63 NSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLE 122
SI A VQ LD+ I L+A+ RKFIYVE AFFQRWW +QS +QN+VK LV SGQLE
Sbjct: 69 MSIAFAGVQYTLDTAITCLLANPERKFIYVEIAFFQRWWDEQSTTMQNIVKGLVESGQLE 128
Query: 123 LINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAE 182
INGG CM+DEA +Y D IDQ TLGH+++ E F V P+IGW IDPFGHSA QA + +
Sbjct: 129 FINGGYCMNDEATTYYDDTIDQMTLGHQFLWENFGVMPKIGWHIDPFGHSATQARIF-GQ 187
Query: 183 VGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFE 242
+GFD R+DYQD R+ K +E +WR+++S + Q+ T + Y P D F FE
Sbjct: 188 LGFDAFIIGRMDYQDIEARLENKQMEFMWRSTQSTPEN-QVFTSVLRAMYCTP-DGFNFE 245
Query: 243 VGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFR 302
GD PI QDD NLFD NV R F A+ A RTN+++ G DF Y A +++
Sbjct: 246 QGD-DPI-QDDPNLFDNNVDSRAEQFTQVALEYATHYRTNNVLIPFGCDFAYLNAQMYYK 303
Query: 303 QMDKFIHYVNQDGR---VNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGY 359
+DK I ++N + +N LYSTPS+YIDA AN W +KTDD FPYAD E +YWTGY
Sbjct: 304 NIDKLIAHINSNPDKYGLNLLYSTPSIYIDAVNDANLVWEVKTDDLFPYADNEFSYWTGY 363
Query: 360 FTSRPALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLAD-------ALALVQHHDAV 412
F SRPALKGYVR +A Q+ ++ L D + + QHHDAV
Sbjct: 364 FVSRPALKGYVRQNNALLHVVEQMLVTSSNLMPSSRSEQLVDDIVIMREVMGIAQHHDAV 423
Query: 413 SGTEKQHVADDYAKRLSIGYT---EAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNI 469
SGTE+QHVADDYA+RLSIG E V +L SK+ P +F CPLLN
Sbjct: 424 SGTEQQHVADDYAERLSIGNCASLETINTVVGTLLTANGNSKSAAATPTISF--CPLLNQ 481
Query: 470 SYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLK 529
S CP ++ LSSG S+ V++YN L W R + +RIP+ NVTV S I SQ+
Sbjct: 482 SICPATD-PLSSGTSVPVLIYNSLSWTRNEPVRIPIPIANVTVTSSSNGSITSQV----- 535
Query: 530 DSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYII-SSAKQAASHSGMRTV-- 586
+ ++ L F A++PPLG++TYII S+A + + +
Sbjct: 536 -----------------NQINGTFILEFLATIPPLGYSTYIITSTASDFVEPNSIPAIII 578
Query: 587 -----------YKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIY 635
++ ND I + + + +S + ++ N + V + Q YI+
Sbjct: 579 QDEIIVSGGGKINEKVSYNDPIILENDYINVQFSSQDGSILSITNKTSGVTSSITQEYIW 638
Query: 636 YRGDDGSKD-LQPSGAYIFRP--NGTYPIEPEGQLSFTILRGPLLDEVHQRINPWIYQVT 692
Y G+ D Q SGAYIFRP + YP S +I+RG + + + + + Q
Sbjct: 639 YNPSVGNDDSAQCSGAYIFRPVEDFAYPYN-NATPSVSIIRGEISSSIRRFWSNEMVQTF 697
Query: 693 RVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRK 752
R+Y DH E+E +GPI I DGIGKE+V++ T+ +++++T+Y+DS G + +RI +YR
Sbjct: 698 RLYSNADHLEVEEIIGPIDISDGIGKEIVSRYTTTLVTDQTWYSDSQGMEMQKRITNYRP 757
Query: 753 DWNLEVNQPIAGNYYPVNLGIYMKD--NSSELSILVDRSVGGSSIADGQLELMLHRRLVA 810
WNL V QP +GNY PVN Y++D S + +I+ DRS G +S+ DGQL++M+HRR +
Sbjct: 758 SWNLTVVQPTSGNYVPVNAIAYIQDPNQSLQFTIVTDRSRGCASLRDGQLDMMMHRRTLK 817
Query: 811 DDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAF-- 868
DD RGV + +NE+ + + + D A R + P L F
Sbjct: 818 DDGRGVGQPMNESTQI--------VTTSKLIFHDISSYAQSHYRPAALSLSHPLLPMFTT 869
Query: 869 TEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDS--GKILLRLAHLYE 919
T+Q + W + + YS + + LP+ + + TLQ LD+ ILLR+ ++Y+
Sbjct: 870 TQQSSNDWNSQYQGVYSPLTSASPLPNGLKIQTLQWLDNQDNTILLRIENIYQ 922
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Dictyostelium discoideum (taxid: 44689) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4 |
| >sp|Q8VHC8|MA2B1_CAVPO Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1 | Back alignment and function description |
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| >sp|O09159|MA2B1_MOUSE Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=4 | Back alignment and function description |
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| >sp|O00754|MA2B1_HUMAN Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q60HE9|MA2B1_MACFA Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1 | Back alignment and function description |
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| >sp|O46432|MA2B1_FELCA Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q29451|MA2B1_BOVIN Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3 | Back alignment and function description |
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| >sp|P27046|MA2A1_MOUSE Alpha-mannosidase 2 OS=Mus musculus GN=Man2a1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q16706|MA2A1_HUMAN Alpha-mannosidase 2 OS=Homo sapiens GN=MAN2A1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q24451|MAN2_DROME Alpha-mannosidase 2 OS=Drosophila melanogaster GN=alpha-Man-II PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 929 | ||||||
| 255540059 | 1012 | lysosomal alpha-mannosidase, putative [R | 0.988 | 0.907 | 0.786 | 0.0 | |
| 224122176 | 1012 | predicted protein [Populus trichocarpa] | 0.980 | 0.900 | 0.778 | 0.0 | |
| 356508869 | 1011 | PREDICTED: lysosomal alpha-mannosidase-l | 0.978 | 0.899 | 0.748 | 0.0 | |
| 359491464 | 1016 | PREDICTED: lysosomal alpha-mannosidase [ | 0.984 | 0.900 | 0.749 | 0.0 | |
| 225456481 | 1009 | PREDICTED: lysosomal alpha-mannosidase [ | 0.967 | 0.890 | 0.746 | 0.0 | |
| 440546588 | 1024 | alpha-mannosidase [Prunus persica] | 0.982 | 0.891 | 0.733 | 0.0 | |
| 356516487 | 1012 | PREDICTED: lysosomal alpha-mannosidase-l | 0.981 | 0.901 | 0.732 | 0.0 | |
| 350538359 | 1028 | alpha-mannosidase precursor [Solanum lyc | 0.984 | 0.890 | 0.728 | 0.0 | |
| 359488553 | 1025 | PREDICTED: lysosomal alpha-mannosidase-l | 0.986 | 0.893 | 0.732 | 0.0 | |
| 315440801 | 1030 | alpha-mannosidase [Capsicum annuum] | 0.988 | 0.891 | 0.725 | 0.0 |
| >gi|255540059|ref|XP_002511094.1| lysosomal alpha-mannosidase, putative [Ricinus communis] gi|223550209|gb|EEF51696.1| lysosomal alpha-mannosidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1560 bits (4038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 728/926 (78%), Positives = 821/926 (88%), Gaps = 8/926 (0%)
Query: 1 MANQVCLVVVL--FLCLLCVESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYY 58
M Q C ++VL CL VESKYM+YNT+A IVPGKINVHLVPH+HDDVGWLKT+DQYY
Sbjct: 1 MVIQACFLIVLSSIFCL-SVESKYMVYNTTASIVPGKINVHLVPHTHDDVGWLKTMDQYY 59
Query: 59 VGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNS 118
VGSNNSIQ ACVQN+LDSL+PAL+ADKNRKFIYVEQAFFQRWW +QSEEVQ +VK+LV+S
Sbjct: 60 VGSNNSIQGACVQNILDSLVPALLADKNRKFIYVEQAFFQRWWNEQSEEVQKIVKKLVSS 119
Query: 119 GQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYL 178
GQLELINGGMCMHDEAA HYIDMIDQTTLGH++IK++FN+TPRIGWQIDPFGHSAVQ YL
Sbjct: 120 GQLELINGGMCMHDEAATHYIDMIDQTTLGHKFIKQEFNLTPRIGWQIDPFGHSAVQGYL 179
Query: 179 LSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDN 238
L AEVGFD +FFARIDYQDR+KR +EK+LEVVWR SKSLGSSAQI G PKNYEPPSDN
Sbjct: 180 LGAEVGFDSIFFARIDYQDRSKRKDEKSLEVVWRGSKSLGSSAQIFAGAFPKNYEPPSDN 239
Query: 239 FYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAH 298
FYFEV D SPIVQDD+NLFDYNVP+RVNDFVSAA++QANITRTNHIMWTMGTDFKYQYAH
Sbjct: 240 FYFEVNDESPIVQDDINLFDYNVPDRVNDFVSAAMSQANITRTNHIMWTMGTDFKYQYAH 299
Query: 299 TWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTG 358
+WF+QMDKFIHYVNQDGRVNA YSTPS+Y DAKYAANESWPLKTDD+FPYAD NAYWTG
Sbjct: 300 SWFKQMDKFIHYVNQDGRVNAFYSTPSIYTDAKYAANESWPLKTDDYFPYADDVNAYWTG 359
Query: 359 YFTSRPALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLADALALVQHHDAVSGTEKQ 418
YFTSRPA+KGYVRT+S YYLAARQLEF KGR++ G +TDSLA+ALA+ QHHDAV+GTEKQ
Sbjct: 360 YFTSRPAIKGYVRTISGYYLAARQLEFLKGRSKAGSNTDSLANALAVAQHHDAVTGTEKQ 419
Query: 419 HVADDYAKRLSIGYTEAEKVVAASLACLTEFS-KNGCVNPITNFQQCPLLNISYCPPSEV 477
HVADDYAKRLSIGY EAEKVV SL+C+ E + C N FQQCPLLNISYCP SEV
Sbjct: 420 HVADDYAKRLSIGYKEAEKVVGESLSCIAESKLETDCTNTTNKFQQCPLLNISYCPASEV 479
Query: 478 DLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNS 537
DLS+GKSLVVVVYN LGWKRE++IR+PVINENV VKDS+G IESQLLPLL S+S+RN
Sbjct: 480 DLSNGKSLVVVVYNSLGWKRENVIRVPVINENVNVKDSEGNEIESQLLPLLDASISVRNY 539
Query: 538 YSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISS----AKQAASHSGMRTVYKSQIRQ 593
+S AYLG S NVTP YWLAFS SVPPLGF+TYII+S AK+ A+ S +TV+K++ Q
Sbjct: 540 HSMAYLGSSPNVTPKYWLAFSVSVPPLGFSTYIIASAPPTAKRTAAFSEAQTVHKTRATQ 599
Query: 594 NDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIF 653
TIE+GPGNLKL+YSGK K+ +YIN +TSV K +EQSY YY GDDGSKDLQ SGAYIF
Sbjct: 600 YGTIEIGPGNLKLIYSGKDGKIAQYINRRTSVKKSVEQSYSYYAGDDGSKDLQASGAYIF 659
Query: 654 RPNGTYPIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPID 713
RPNGTYPI +GQ++FT+LRGPLLDE+H RIN WIYQ+TRVYKGK+HAE+EFTVGPIPID
Sbjct: 660 RPNGTYPINSKGQVAFTVLRGPLLDEIHHRINSWIYQITRVYKGKEHAEVEFTVGPIPID 719
Query: 714 DGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGI 773
DGIGKEVVT+IT+ + +NKTFYTDSSGRDF+ERIRDYRKDW+L+VNQP+AGNYYP+NLGI
Sbjct: 720 DGIGKEVVTKITTTLKNNKTFYTDSSGRDFLERIRDYRKDWDLQVNQPVAGNYYPINLGI 779
Query: 774 YMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGL 833
YMKDNSSELSILVDRSVGGSSI DGQLELMLHRRLV DD+RGV EALNETVCV DKC GL
Sbjct: 780 YMKDNSSELSILVDRSVGGSSIVDGQLELMLHRRLVIDDSRGVGEALNETVCVLDKCTGL 839
Query: 834 TIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVL 893
TI+GKYYLRIDP+ E AKWRRS+GQEIYSPFLLAF EQD + W SH+ T+SAM ++YVL
Sbjct: 840 TIVGKYYLRIDPLSEGAKWRRSYGQEIYSPFLLAFAEQDRESWTKSHVTTFSAMGSSYVL 899
Query: 894 PDNVALITLQELDSGKILLRLAHLYE 919
PDNVA++TLQELD+GK L+R AHLYE
Sbjct: 900 PDNVAILTLQELDNGKTLIRFAHLYE 925
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224122176|ref|XP_002318770.1| predicted protein [Populus trichocarpa] gi|222859443|gb|EEE96990.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356508869|ref|XP_003523176.1| PREDICTED: lysosomal alpha-mannosidase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|359491464|ref|XP_002277164.2| PREDICTED: lysosomal alpha-mannosidase [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225456481|ref|XP_002280858.1| PREDICTED: lysosomal alpha-mannosidase [Vitis vinifera] gi|297734505|emb|CBI15752.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|440546588|gb|AGC10269.1| alpha-mannosidase [Prunus persica] | Back alignment and taxonomy information |
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| >gi|356516487|ref|XP_003526925.1| PREDICTED: lysosomal alpha-mannosidase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|350538359|ref|NP_001234851.1| alpha-mannosidase precursor [Solanum lycopersicum] gi|301176645|gb|ADK66339.1| alpha-mannosidase [Solanum lycopersicum] | Back alignment and taxonomy information |
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| >gi|359488553|ref|XP_002276092.2| PREDICTED: lysosomal alpha-mannosidase-like [Vitis vinifera] gi|296082271|emb|CBI21276.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|315440801|gb|ADU20406.1| alpha-mannosidase [Capsicum annuum] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 929 | ||||||
| TAIR|locus:2159143 | 1024 | AT5G13980 [Arabidopsis thalian | 0.965 | 0.875 | 0.690 | 0.0 | |
| TAIR|locus:2090817 | 1019 | AT3G26720 [Arabidopsis thalian | 0.963 | 0.878 | 0.665 | 0.0 | |
| TAIR|locus:2156857 | 1047 | AT5G66150 [Arabidopsis thalian | 0.685 | 0.608 | 0.582 | 2.6e-292 | |
| MGI|MGI:107286 | 1013 | Man2b1 "mannosidase 2, alpha B | 0.524 | 0.480 | 0.442 | 2.8e-174 | |
| UNIPROTKB|G5E928 | 1010 | MAN2B1 "Mannosidase, alpha, cl | 0.524 | 0.482 | 0.449 | 2.5e-173 | |
| UNIPROTKB|O00754 | 1011 | MAN2B1 "Lysosomal alpha-mannos | 0.524 | 0.481 | 0.450 | 5.3e-173 | |
| RGD|3039 | 1009 | Man2b1 "mannosidase, alpha, cl | 0.524 | 0.482 | 0.440 | 6e-172 | |
| UNIPROTKB|F1PKB2 | 1007 | MAN2B1 "Uncharacterized protei | 0.546 | 0.504 | 0.441 | 1.4e-170 | |
| DICTYBASE|DDB_G0292206 | 1010 | manA "alpha-mannosidase" [Dict | 0.924 | 0.850 | 0.416 | 1.5e-168 | |
| UNIPROTKB|F1MMX7 | 999 | MAN2B1 "Lysosomal alpha-mannos | 0.531 | 0.494 | 0.450 | 3.4e-167 |
| TAIR|locus:2159143 AT5G13980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3378 (1194.2 bits), Expect = 0., P = 0.
Identities = 626/906 (69%), Positives = 737/906 (81%)
Query: 19 ESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLI 78
ES+YM+YNTS IVPGK+NVH+VPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDS++
Sbjct: 20 ESRYMVYNTSHTIVPGKLNVHVVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSIV 79
Query: 79 PALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHY 138
PAL+ADKNRKFIYVEQAFFQRWW +QSEE++ +VK+L++SGQLELINGGMCMHDEAAPHY
Sbjct: 80 PALLADKNRKFIYVEQAFFQRWWNEQSEEIKRIVKELIHSGQLELINGGMCMHDEAAPHY 139
Query: 139 IDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDR 198
IDMIDQTTLGHR+I +FNVTPRIGWQIDPFGHSAVQAYLL AEVGFD +FF RIDYQDR
Sbjct: 140 IDMIDQTTLGHRFIIREFNVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSVFFGRIDYQDR 199
Query: 199 AKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFD 258
KR EKTLEV+WR SKSLGSS+QI G P NYEPP FY+E+ D SP+VQDD +LFD
Sbjct: 200 EKRYKEKTLEVIWRGSKSLGSSSQIFAGAFPTNYEPPPGGFYYEITDDSPVVQDDPDLFD 259
Query: 259 YNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQDGRVN 318
YNV ERVN FV+AA+ QANITR NHIM+TMGTDF+YQYAHTW+RQMDK IHYVN DGRVN
Sbjct: 260 YNVQERVNAFVAAALDQANITRINHIMFTMGTDFRYQYAHTWYRQMDKLIHYVNLDGRVN 319
Query: 319 ALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYL 378
A YSTPS+Y DAK+AANE+WPLKT+D+FPYADR NAYWTGYFTSRPALK YVR MSAYYL
Sbjct: 320 AFYSTPSIYTDAKHAANEAWPLKTEDYFPYADRINAYWTGYFTSRPALKRYVRVMSAYYL 379
Query: 379 AARQLEFFKGRNEVGXXXXXXXXXXXXVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKV 438
AARQLEFFKGR++ G QHHDAVSGT KQHVA+DYAKRL+IGY EAE V
Sbjct: 380 AARQLEFFKGRSQKGPNTDSLADALAIAQHHDAVSGTSKQHVANDYAKRLAIGYVEAESV 439
Query: 439 VAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKRE 498
VA SLA LT+ +NP FQQC LLNISYCP SEV+LS GKSL+V+ YNPLGWKR
Sbjct: 440 VATSLAHLTKVDPT--LNP--TFQQCLLLNISYCPSSEVNLSDGKSLIVLAYNPLGWKRV 495
Query: 499 DIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFS 558
DI+R+PV+ +V+V DS+G +ESQL+P + ++LR + AYLG+S P YWL FS
Sbjct: 496 DIVRLPVVGGDVSVHDSEGHEVESQLVPFTDEYVALRKYHVEAYLGQSPTQVPKYWLVFS 555
Query: 559 ASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRY 618
+VPPLGF TY IS+AK+ +S V + I +G G+LKL +S + + Y
Sbjct: 556 VTVPPLGFTTYTISTAKKTDGYSSKSYVSNILKGEQSIINIGHGHLKLSFSTDQGTAINY 615
Query: 619 INSKTSVNKLLEQSYIYYRGDDGSKDLQP-----SGAYIFRPNGTYPIEPEGQLSFTILR 673
+N +TS+ + ++Q++ YY +GS D +P SGAY+FRPNGT+PI PEGQ+ T++
Sbjct: 616 VNGRTSMTEPVKQTFSYYSAYNGSNDKEPLIPQNSGAYVFRPNGTFPINPEGQVPLTVIH 675
Query: 674 GPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKT 733
GPL+DEVHQ+INPWI Q+TRVYKGK+H E+EF VG IPIDDGIGKEVVTQI+S++ SNKT
Sbjct: 676 GPLVDEVHQQINPWISQITRVYKGKEHVEVEFIVGNIPIDDGIGKEVVTQISSSLKSNKT 735
Query: 734 FYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGS 793
FYTDSSGRD+I+RIRDYR DW L+VNQPIAGNYYP+N GIY++D+ E S++VDR+ GGS
Sbjct: 736 FYTDSSGRDYIKRIRDYRSDWKLDVNQPIAGNYYPINHGIYLQDSKKEFSVMVDRAFGGS 795
Query: 794 SIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWR 853
SI DGQ+ELMLHRRL+ DD+RGV+E LNETVCV DKC GLTI GKYY RIDP GE AKWR
Sbjct: 796 SIVDGQVELMLHRRLLLDDSRGVAENLNETVCVQDKCTGLTIQGKYYYRIDPYGEGAKWR 855
Query: 854 RSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGKILLR 913
R+FGQEIYSP LLAF +QD + A++S +D +Y LPDNVAL+TLQELD G +LLR
Sbjct: 856 RTFGQEIYSPLLLAFAQQDDGKPMSFGAASFSGIDPSYSLPDNVALLTLQELDDGNVLLR 915
Query: 914 LAHLYE 919
LAHLYE
Sbjct: 916 LAHLYE 921
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| TAIR|locus:2090817 AT3G26720 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2156857 AT5G66150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| MGI|MGI:107286 Man2b1 "mannosidase 2, alpha B1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G5E928 MAN2B1 "Mannosidase, alpha, class 2B, member 1, isoform CRA_a" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O00754 MAN2B1 "Lysosomal alpha-mannosidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| RGD|3039 Man2b1 "mannosidase, alpha, class 2B, member 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PKB2 MAN2B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0292206 manA "alpha-mannosidase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MMX7 MAN2B1 "Lysosomal alpha-mannosidase D peptide" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O00754 | MA2B1_HUMAN | 3, ., 2, ., 1, ., 2, 4 | 0.4109 | 0.9192 | 0.8447 | yes | no |
| Q8VHC8 | MA2B1_CAVPO | 3, ., 2, ., 1, ., 2, 4 | 0.4113 | 0.9085 | 0.8381 | yes | no |
| P34098 | MANA_DICDI | 3, ., 2, ., 1, ., 2, 4 | 0.3997 | 0.9407 | 0.8653 | yes | no |
| Q29451 | MA2B1_BOVIN | 3, ., 2, ., 1, ., 2, 4 | 0.4038 | 0.9235 | 0.8588 | yes | no |
| O09159 | MA2B1_MOUSE | 3, ., 2, ., 1, ., 2, 4 | 0.3982 | 0.9472 | 0.8687 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.XII.1318.1 | SubName- Full=Putative uncharacterized protein; (1003 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 929 | |||
| cd10810 | 278 | cd10810, GH38N_AMII_LAM_like, N-terminal catalytic | 1e-175 | |
| PLN02701 | 1050 | PLN02701, PLN02701, alpha-mannosidase | 1e-105 | |
| cd00451 | 258 | cd00451, GH38N_AMII_euk, N-terminal catalytic doma | 1e-104 | |
| pfam01074 | 269 | pfam01074, Glyco_hydro_38, Glycosyl hydrolases fam | 9e-95 | |
| cd10809 | 340 | cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal | 4e-71 | |
| cd11666 | 344 | cd11666, GH38N_Man2A1, N-terminal catalytic domain | 6e-58 | |
| cd10811 | 326 | cd10811, GH38N_AMII_Epman_like, N-terminal catalyt | 1e-56 | |
| cd11667 | 344 | cd11667, GH38N_Man2A2, N-terminal catalytic domain | 5e-55 | |
| cd10786 | 251 | cd10786, GH38N_AMII_like, N-terminal catalytic dom | 2e-47 | |
| pfam07748 | 379 | pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa | 2e-39 | |
| pfam09261 | 82 | pfam09261, Alpha-mann_mid, Alpha mannosidase, midd | 1e-22 | |
| smart00872 | 79 | smart00872, Alpha-mann_mid, Alpha mannosidase, mid | 3e-22 | |
| cd10789 | 252 | cd10789, GH38N_AMII_ER_cytosolic, N-terminal catal | 3e-10 | |
| cd10785 | 203 | cd10785, GH38-57_N_LamB_YdjC_SF, Catalytic domain | 4e-05 | |
| cd10812 | 258 | cd10812, GH38N_AMII_ScAms1_like, N-terminal cataly | 1e-04 | |
| cd10791 | 254 | cd10791, GH38N_AMII_like_1, N-terminal catalytic d | 5e-04 | |
| pfam07748 | 379 | pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa | 0.002 | |
| cd10793 | 279 | cd10793, GH57N_TLGT_like, N-terminal catalytic dom | 0.002 | |
| cd10813 | 252 | cd10813, GH38N_AMII_Man2C1, N-terminal catalytic d | 0.004 |
| >gnl|CDD|212121 cd10810, GH38N_AMII_LAM_like, N-terminal catalytic domain of lysosomal alpha-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
Score = 508 bits (1311), Expect = e-175
Identities = 169/280 (60%), Positives = 204/280 (72%), Gaps = 4/280 (1%)
Query: 36 INVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQA 95
+NVHLVPH+HDDVGWLKTVDQYY GSNNSIQ A VQ +LDS+I L+ + +RKFIYVE A
Sbjct: 1 LNVHLVPHTHDDVGWLKTVDQYYYGSNNSIQHAGVQYILDSVIEELLKNPDRKFIYVEIA 60
Query: 96 FFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQ 155
FF RWWR+QSE+ + VK+LV +GQLE INGG CM+DEA HY D+IDQ TLGH+++K+
Sbjct: 61 FFSRWWREQSEDTRQKVKKLVKNGQLEFINGGWCMNDEATTHYEDIIDQMTLGHQFLKDT 120
Query: 156 FNV--TPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRA 213
F PR+GWQIDPFGHS QA L + GFD LFF RIDYQD+A+R+ K +E +WR
Sbjct: 121 FGECARPRVGWQIDPFGHSRTQASLFAQM-GFDGLFFGRIDYQDKAQRLKNKEMEFIWRG 179
Query: 214 SKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAI 273
S SLG A I TG+ +Y PP F F++ +QDD NL DYNV ERV+DFV A
Sbjct: 180 SPSLGPDADIFTGVLYNHYGPP-PGFCFDILCGDEPIQDDPNLEDYNVDERVDDFVQYAK 238
Query: 274 AQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQ 313
QA RTNHIM TMG+DF+YQ A WF+ MDK I YVN+
Sbjct: 239 EQAQHYRTNHIMLTMGSDFQYQNAEMWFKNMDKLIKYVNK 278
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The subfamily is represented by lysosomal alpha-mannosidase (LAM, Man2B1, EC 3.2.1.114), which is a broad specificity exoglycosidase hydrolyzing all known alpha 1,2-, alpha 1,3-, and alpha 1,6-mannosidic linkages from numerous high mannose type oligosaccharides. LAM is expressed in all tissues and in many species. In mammals, the absence of LAM can cause the autosomal recessive disease alpha-mannosidosis. LAM has an acidic pH optimum at 4.0-4.5. It is stimulated by zinc ion and is inhibited by cobalt ion and plant alkaloids, such as swainsonine (SW). LAM catalyzes hydrolysis by a double displacement mechanism in which a glycosyl-enzyme intermediate is formed and hydrolyzed via oxacarbenium ion-like transition states. A carboxylic acid in the active site acts as the catalytic nucleophile in the formation of the covalent intermediate while a second carboxylic acid acts as a general acid catalyst. The same residue is thought to assist in the hydrolysis (deglycosylation) step, this time acting as a general base. Length = 278 |
| >gnl|CDD|178304 PLN02701, PLN02701, alpha-mannosidase | Back alignment and domain information |
|---|
| >gnl|CDD|212095 cd00451, GH38N_AMII_euk, N-terminal catalytic domain of eukaryotic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|216284 pfam01074, Glyco_hydro_38, Glycosyl hydrolases family 38 N-terminal domain | Back alignment and domain information |
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| >gnl|CDD|212120 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal catalytic domain of Golgi alpha-mannosidase II, Spodoptera frugiperda Sf9 alpha-mannosidase III, and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
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| >gnl|CDD|212131 cd11666, GH38N_Man2A1, N-terminal catalytic domain of Golgi alpha-mannosidase II and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
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| >gnl|CDD|212122 cd10811, GH38N_AMII_Epman_like, N-terminal catalytic domain of mammalian core-specific lysosomal alpha 1,6-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
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| >gnl|CDD|212132 cd11667, GH38N_Man2A2, N-terminal catalytic domain of Golgi alpha-mannosidase IIx, and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212098 cd10786, GH38N_AMII_like, N-terminal catalytic domain of class II alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain | Back alignment and domain information |
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| >gnl|CDD|220157 pfam09261, Alpha-mann_mid, Alpha mannosidase, middle domain | Back alignment and domain information |
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| >gnl|CDD|214875 smart00872, Alpha-mann_mid, Alpha mannosidase, middle domain | Back alignment and domain information |
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| >gnl|CDD|212101 cd10789, GH38N_AMII_ER_cytosolic, N-terminal catalytic domain of endoplasmic reticulum(ER)/cytosolic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212097 cd10785, GH38-57_N_LamB_YdjC_SF, Catalytic domain of glycoside hydrolase (GH) families 38 and 57, lactam utilization protein LamB/YcsF family proteins, YdjC-family proteins, and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|212123 cd10812, GH38N_AMII_ScAms1_like, N-terminal catalytic domain of yeast vacuolar alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212103 cd10791, GH38N_AMII_like_1, N-terminal catalytic domain of mainly uncharacterized eukaryotic proteins similar to alpha-mannosidases; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain | Back alignment and domain information |
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| >gnl|CDD|212105 cd10793, GH57N_TLGT_like, N-terminal catalytic domain of 4-alpha-glucanotransferase; glycoside hydrolase family 57 (GH57) | Back alignment and domain information |
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| >gnl|CDD|212124 cd10813, GH38N_AMII_Man2C1, N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 929 | |||
| KOG1959 | 996 | consensus Glycosyl hydrolase, family 38 - alpha-ma | 100.0 | |
| PLN02701 | 1050 | alpha-mannosidase | 100.0 | |
| KOG1958 | 1129 | consensus Glycosyl hydrolase, family 38 - alpha-ma | 100.0 | |
| PRK09819 | 875 | alpha-mannosidase; Provisional | 100.0 | |
| KOG4342 | 1078 | consensus Alpha-mannosidase [Carbohydrate transpor | 100.0 | |
| PF01074 | 275 | Glyco_hydro_38: Glycosyl hydrolases family 38 N-te | 100.0 | |
| COG0383 | 943 | AMS1 Alpha-mannosidase [Carbohydrate transport and | 100.0 | |
| PF07748 | 457 | Glyco_hydro_38C: Glycosyl hydrolases family 38 C-t | 100.0 | |
| PF09261 | 80 | Alpha-mann_mid: Alpha mannosidase, middle domain; | 99.84 | |
| smart00872 | 79 | Alpha-mann_mid Alpha mannosidase, middle domain. M | 99.81 | |
| COG0383 | 943 | AMS1 Alpha-mannosidase [Carbohydrate transport and | 99.74 | |
| PF03065 | 360 | Glyco_hydro_57: Glycosyl hydrolase family 57; Inte | 98.43 | |
| COG1543 | 504 | Uncharacterized conserved protein [Function unknow | 96.36 | |
| PF01522 | 123 | Polysacc_deac_1: Polysaccharide deacetylase; Inter | 95.58 | |
| COG1449 | 615 | Alpha-amylase/alpha-mannosidase [Carbohydrate tran | 94.2 | |
| TIGR02764 | 191 | spore_ybaN_pdaB polysaccharide deacetylase family | 92.81 | |
| TIGR02884 | 224 | spore_pdaA delta-lactam-biosynthetic de-N-acetylas | 92.04 | |
| TIGR03006 | 265 | pepcterm_polyde polysaccharide deactylase family p | 89.69 | |
| TIGR03212 | 297 | uraD_N-term-dom putative urate catabolism protein. | 89.09 | |
| TIGR02873 | 268 | spore_ylxY probable sporulation protein, polysacch | 88.43 | |
| PRK14582 | 671 | pgaB outer membrane N-deacetylase; Provisional | 86.16 | |
| PRK14581 | 672 | hmsF outer membrane N-deacetylase; Provisional | 82.78 |
| >KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-226 Score=1879.61 Aligned_cols=901 Identities=52% Similarity=0.853 Sum_probs=822.7
Q ss_pred CCccchhhhHHHHhhhcccceeeEecCCCCCCCCceEEEEEecccCCCccchhhhheeecCCcchhhHHHHHHHHHHHHH
Q 002383 1 MANQVCLVVVLFLCLLCVESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPA 80 (929)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VhlVpHSH~D~gWl~T~~ey~~~~~~~i~~~~v~~il~~vi~~ 80 (929)
|++.++++|+|++++.......+ |++|+...+++++||||||||+|+||||||||||+|++|.||+++|++|||+||++
T Consensus 3 l~~~~~~l~~l~lli~~~~~~~~-y~t~~~~~~~~invHlVPHSHDDVGWLKTVDQyy~G~~n~Iq~AgVqyIldSVV~e 81 (996)
T KOG1959|consen 3 LNKFLLFLCLLLLLISLVESRAG-YNTCHKVVPNMINVHLVPHSHDDVGWLKTVDQYYYGSKNKIQHAGVQYILDSVVEE 81 (996)
T ss_pred cccchHHHHHHHHHHHHHhHhhc-cCCCccccCceeEEEecCCccCccceeeeehhheecCCcccchhhHHHHHHHHHHH
Confidence 34556666666555555444444 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCeEEEechhHHHHHHhccChHHHHHHHHHHHcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHHHHHcC--C
Q 002383 81 LVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFN--V 158 (929)
Q Consensus 81 L~~~p~~kF~~~e~~~~~~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l~~~fG--~ 158 (929)
|.+||+||||++|++||.+||++|++++|+.||+||++||||||||||||||||++||.++||||++||+||.++|| .
T Consensus 82 Ll~dp~RRFI~VE~aFF~rWW~~qS~~~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~hY~dvIDQ~TlGlrfL~~tFG~cg 161 (996)
T KOG1959|consen 82 LLKDPNRRFIYVETAFFARWWNEQSETQKEQVKKLVNEGRLEFIGGGWSMNDEATTHYQDVIDQFTLGLRFLKDTFGECG 161 (996)
T ss_pred HhcCCccceehhhHHHHHHHHHhcCHHHHHHHHHHHhcCCEEEecCeeeecchhhhhHHHHHHHHHHHHHHHHHHhcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 7
Q ss_pred CCceeeecCCCCCchhhHHHHHhhcCCcEEEEeecChHhHHHhhhcCceeEEEeeCCCCCCCCceeeeeCCCCCCCCCCC
Q 002383 159 TPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDN 238 (929)
Q Consensus 159 ~p~v~W~iD~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~~Y~~p~~~ 238 (929)
+|++||||||||||+.||+|| ++|||++.+|+||||+||+.|..++.|||+|+|++++++.++|||++||+||++| +|
T Consensus 162 rPrvgWqIDPFGHSreqAslf-AqmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~~~iFTg~l~n~Y~~P-~g 239 (996)
T KOG1959|consen 162 RPRVGWQIDPFGHSREQASLF-AQMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSSSQIFTGALYNHYSPP-PG 239 (996)
T ss_pred CcceeeeeCCCCcchHHHHHH-HHhCccchheeecchhhHHHHHhhccceEEeecCccccchhhhhhhccccCCCCC-CC
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999 99
Q ss_pred CCcccCCCCCCccCCccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCcchHHHHHHHHHHHHHHhcC---C
Q 002383 239 FYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQD---G 315 (929)
Q Consensus 239 f~f~~~~~~~p~~~~~~i~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~~~n~~~li~~~N~~---~ 315 (929)
||||.+|.+.|++|++.+.+|||++|++.|++.++.++..|+|||||+|||+||+|.+|..||+||||||+|+|+. +
T Consensus 240 fc~dv~c~d~Pi~D~~~~~d~NVkerVd~Fv~~a~~~a~~~RtnHim~~MG~DFqY~~A~v~fknmDkLI~yVN~~qa~g 319 (996)
T KOG1959|consen 240 FCFDVLCGDDPIIDGPRSYDYNVKERVDDFVAYAKNQAAYYRTNHIMWPMGDDFQYENANVWFKNMDKLIKYVNERQADG 319 (996)
T ss_pred ceeccccCCCCCCCCCCCCCccHHHHHHHHHHHHHHhHhheecceEEEeccCCceehhhhHHHhhHHHHHHHhhhhhcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999943 4
Q ss_pred -CeeEEEcChhhHHHHHHhcCCCCCCcccCCccccccCCCceeeeeccchhhhHHHHHHhHHHHHHHHHHhhhcccc--C
Q 002383 316 -RVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNE--V 392 (929)
Q Consensus 316 -~~~i~~sT~~~Yf~al~~~~~~~p~~~gDffpy~~~~~~yWtGyyTSRp~~K~~~R~~e~~L~~ae~l~~l~~~~~--~ 392 (929)
++++.||||+||++|+++.+..||+++.|||||++++|+||||||||||.+|++.|.++++|++|++|.+++++.. .
T Consensus 320 s~vnv~YSTpscYl~alh~~~~Twp~Kt~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~akQL~~la~l~~~~~ 399 (996)
T KOG1959|consen 320 SKVNVFYSTPSCYLNALHAANQTWPVKTDDFFPYASEPHSYWTGYFTSRPALKRFERDGSHYLQVAKQLSVLAGLSSTEQ 399 (996)
T ss_pred ceEEEEEcChHHHHHHHHHhcCcccccccccCcCCCCCCcceeeeccccHHHHHHHhhhhHHHHHHHHHhhhcCCCcccc
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999998654 5
Q ss_pred CCchHHHHHHHHhhhccccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCcccccccccccccC
Q 002383 393 GLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYC 472 (929)
Q Consensus 393 ~~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~~ 472 (929)
.+.++.|+++|++.|||||||||+|++|.+||.++|..|+..|+++++.+|+.|.... ..+|++|++||+|+|
T Consensus 400 ~~dl~~Lream~i~QHHDAVTGTekq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~~~-------~~~f~~C~~lNiS~C 472 (996)
T KOG1959|consen 400 GPDLDYLREAMAIMQHHDAVTGTEKQHVADDYARRLADGILGAEKLARDALRKLTNLP-------NGEFQSCLLLNISEC 472 (996)
T ss_pred CccHHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-------CccchhhhhhccccC
Confidence 6789999999999999999999999999999999999999999999999999998743 347899999999999
Q ss_pred CCCccccCCCceEEEEEEcCCCceEeEEEEEEEeCCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCc
Q 002383 473 PPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPS 552 (929)
Q Consensus 473 ~~~~~~~~~~~~~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (929)
|.++. ..+.+.|+|||||+|.++++|+|||+.++++|+|+.|++|++|++|.......+. .......
T Consensus 473 ~~t~~---~~~~~~v~~YNpLa~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~----------~~~~~~~ 539 (996)
T KOG1959|consen 473 AFTKD---GADNFIVTLYNPLAHTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALE----------SRNNDTK 539 (996)
T ss_pred CCCcC---CcCcEEEEEEcCCcceeeeEEEEeccCCCeEEECCCCCCcccceeccchhhhhhh----------ccccCCC
Confidence 99863 3578999999999999999999999999999999999999999999876443321 1223467
Q ss_pred EEEEEEeecCCCceEEEEEEeCCcccCccccceeeeccccCCCceEEccCeEEEEEECCCCeEEEEEecCCCcEEEEEEE
Q 002383 553 YWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQS 632 (929)
Q Consensus 553 ~~l~f~~~vPplG~~~y~i~~~~~~~~~~~~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~dk~~g~~~~~~~~ 632 (929)
++|+|.|.|||+|+++|.|+....+... +.+..............|+|+++++.||..+|.+++|....+|.+..+.|.
T Consensus 540 ~eLvf~asvpplg~aty~i~k~~~~~~~-~~~~~~~i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~ 618 (996)
T KOG1959|consen 540 HELVFKASVPPLGIATYFIKKVASTERG-SASHVRNIKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQE 618 (996)
T ss_pred ceEEEEEEecCccceEEEEeecCccccc-ccccccccccccCcceEeccceEEEEEcCCCCceEEEEecccCcceeeeee
Confidence 8999999999999999999965543221 001111111223344899999999999988899999998889999999999
Q ss_pred EEEeecCCCCCCCCCCcceEEccCCCCccCCC-CccEEEEEEcCceEEEEEEEcCeEEEEEEEecCCCceEEEEEECccc
Q 002383 633 YIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPE-GQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIP 711 (929)
Q Consensus 633 ~~~Y~~~~g~~~~~~sgaYiF~P~~~~~~~~~-~~~~i~v~~G~l~~~v~~~~~~~~~~~irLy~~~~~ie~e~~v~~~~ 711 (929)
|.+|.+..|+.+.+.||||+||| +..++++. ....++|+.|||+.||++.++.|++|++|+|+|.+++|+||.|+|||
T Consensus 619 f~~Y~~~~g~n~~q~SgAYiFRp-~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~wiSQviRvy~g~~~~E~Ew~VGpIp 697 (996)
T KOG1959|consen 619 FGYYKGYRGDNDKQASGAYIFRP-GQADIPIVSDQVELTVVDGPLVKEVHQQFNPWISQVIRVYEGKNHVEFEWLVGPIP 697 (996)
T ss_pred eEEEEeecCCcCCccCcceEecC-CCCCccccccceEEEEecCchHHHHHHHHHHHHhheeEecCCCcceEEEEEeccee
Confidence 99999988875569999999999 54444443 35788999999999999999999999999999999999999999999
Q ss_pred ccCCCCcEEEEEEEeeccCCCeEEEcCCCcceeeeccccccCcccccccccccceeeeeeeEEEEeccceeEEEeccccc
Q 002383 712 IDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVG 791 (929)
Q Consensus 712 ~~~~~~~ev~~~f~t~i~s~~~fyTDsnG~~~i~R~~~~r~~w~~~~~~pv~~NyYP~~s~~~I~D~~~~ltvl~dr~~G 791 (929)
++++.|||+++||+|+|.|+++|||||||+||+||.+++|++|.....+||+||||||++.|||+|++.||+|||||+||
T Consensus 698 ~~d~~gkEvVtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~~rl~vL~DRAqG 777 (996)
T KOG1959|consen 698 IDDGIGKEVVTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSKKRLSVLNDRAQG 777 (996)
T ss_pred cCCCccceEEEEeccccccCceEEecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCCceEEEEeecccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCeEEEEEEeeecccCCcCccccccccccccccccCeEEEeEEEEEeccccchh-hhcccchhhhccCceeeeec
Q 002383 792 GSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAA-KWRRSFGQEIYSPFLLAFTE 870 (929)
Q Consensus 792 ~ssl~~G~iElml~Rr~~~DD~rGvge~l~e~~~~~~~~~g~~~~~~~~l~~~~~~~~~-~~~r~~~~~~~~p~~~~~~~ 870 (929)
|+|++||+||||||||++.||+|||||+|||+.++ ..||+++|+|++.|++....+ ..+|..++++..|.+.+|++
T Consensus 778 gsSl~dG~lElMLHRRl~~DD~~Gv~EaLnEt~~~---~~gL~~rGk~~~~l~~~~d~a~~~~r~~~~ei~~P~~~~f~~ 854 (996)
T KOG1959|consen 778 GSSLKDGQLELMLHRRLLNDDGRGVGEALNETVYG---HAGLIARGKLYVLLDKAGDGATGWRRLAEQEIHLPLWKFFSK 854 (996)
T ss_pred CccccCCeEEEEeeehhhcccccccchhccccccc---ccceEEeeeEEEEEecccccchhhhhhhhhhcccHHHHHhhc
Confidence 99999999999999999999999999999999886 279999999999999888775 67888999999999999998
Q ss_pred cCCCccccccccccccCCcCCCCCCceeEEEeEecCCCcEEEEeeehhccccccccCCC
Q 002383 871 QDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGKILLRLAHLYERTQIYQLCQV 929 (929)
Q Consensus 871 ~~~~~~~~~~~~~~s~l~~~~~lP~~vhlltl~~~~~~~~llRl~h~~~~~e~~~~s~~ 929 (929)
.....+........+.+..+..||.+||||||++|+++.+||||+|+|++|||+++|+|
T Consensus 855 ~~~~~~~~~~s~~~~~f~~~~~lP~~vhLlTLe~~~~~~vLlRleh~~e~gED~~~s~v 913 (996)
T KOG1959|consen 855 PEGGEALNSLSIPGSAFSGSYDLPQSVHLLTLEEWSKDEVLLRLEHLYEVGEDSELSQV 913 (996)
T ss_pred CCCccchhhcCCCccccccccCCCcceeeeecccCCCCceEeeehhhhhcccccccCcc
Confidence 77655544332222223323589999999999999999999999999999999999987
|
|
| >PLN02701 alpha-mannosidase | Back alignment and domain information |
|---|
| >KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09819 alpha-mannosidase; Provisional | Back alignment and domain information |
|---|
| >KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold | Back alignment and domain information |
|---|
| >smart00872 Alpha-mann_mid Alpha mannosidase, middle domain | Back alignment and domain information |
|---|
| >COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG1543 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase | Back alignment and domain information |
|---|
| >COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB | Back alignment and domain information |
|---|
| >TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase | Back alignment and domain information |
|---|
| >TIGR03006 pepcterm_polyde polysaccharide deactylase family protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >TIGR03212 uraD_N-term-dom putative urate catabolism protein | Back alignment and domain information |
|---|
| >TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family | Back alignment and domain information |
|---|
| >PRK14582 pgaB outer membrane N-deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK14581 hmsF outer membrane N-deacetylase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 929 | ||||
| 1hxk_A | 1015 | Golgi Alpha-Mannosidase Ii In Complex With Deoxyman | 1e-78 | ||
| 3dx3_A | 1045 | Golgi Alpha-Mannosidase Ii In Complex With Mannosta | 2e-78 | ||
| 1qwn_A | 1045 | Golgi Alpha-Mannosidase Ii Covalent Intermediate Co | 2e-78 | ||
| 1ps3_A | 1045 | Golgi Alpha-mannosidase Ii In Complex With Kifunens | 3e-78 | ||
| 1qwu_A | 1045 | Golgi Alpha-Mannosidase Ii D341n Mutant Complex Wit | 7e-78 | ||
| 3cv5_A | 1045 | Golgi Mannosidase Ii D204a Catalytic Nucleophile Mu | 1e-77 | ||
| 1o7d_A | 298 | The Structure Of The Bovine Lysosomal A-Mannosidase | 2e-77 | ||
| 1hty_A | 1015 | Golgi Alpha-Mannosidase Ii Length = 1015 | 7e-75 | ||
| 1o7d_D | 282 | The Structure Of The Bovine Lysosomal A-Mannosidase | 6e-51 | ||
| 1o7d_C | 159 | The Structure Of The Bovine Lysosomal A-Mannosidase | 3e-19 | ||
| 1o7d_B | 84 | The Structure Of The Bovine Lysosomal A-Mannosidase | 5e-14 |
| >pdb|1HXK|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin Length = 1015 | Back alignment and structure |
|
| >pdb|3DX3|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Mannostatin Analog (1r,2r, 3s,4r,5r)-5-Aminocyclopentane-1,2,3,4-Tetraol Length = 1045 | Back alignment and structure |
| >pdb|1QWN|A Chain A, Golgi Alpha-Mannosidase Ii Covalent Intermediate Complex With 5- Fluoro-Gulosyl-Fluoride Length = 1045 | Back alignment and structure |
| >pdb|1PS3|A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine Length = 1045 | Back alignment and structure |
| >pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With 5-F-Guloside Length = 1045 | Back alignment and structure |
| >pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose Length = 1045 | Back alignment and structure |
| >pdb|1O7D|A Chain A, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 298 | Back alignment and structure |
| >pdb|1HTY|A Chain A, Golgi Alpha-Mannosidase Ii Length = 1015 | Back alignment and structure |
| >pdb|1O7D|D Chain D, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 282 | Back alignment and structure |
| >pdb|1O7D|C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 159 | Back alignment and structure |
| >pdb|1O7D|B Chain B, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 84 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Length = 1045 | Back alignment and structure |
|---|
Score = 716 bits (1849), Expect = 0.0
Identities = 238/966 (24%), Positives = 405/966 (41%), Gaps = 108/966 (11%)
Query: 19 ESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLI 78
+ + Y+ K+ V +VPHSH+D GW++T ++YY +++L + +
Sbjct: 64 QGWNIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQH--------DTKHILSNAL 115
Query: 79 PALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHY 138
L + KFI+ E ++F R++ D E + +K +V +GQLE + GG M DEA H+
Sbjct: 116 RHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHW 175
Query: 139 IDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDR 198
+++ Q T G ++K+ NVTP W I PFGHS Y+L + GF + R Y +
Sbjct: 176 RNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL-QKSGFKNMLIQRTHYSVK 234
Query: 199 AKRINEKTLEVVWRASKSLGSSAQIMTGISPKN-YEPPS---------DNFYFE----VG 244
+ ++ LE +WR + T + P Y+ P F F+ G
Sbjct: 235 KELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFG 294
Query: 245 DTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQ- 303
+ P + D NV R + V +A + RTN ++ +G DF+++ W Q
Sbjct: 295 LSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQR 354
Query: 304 --MDKFIHYVNQDGR--VNALYSTPSMYIDA----KYAANESWPLKTDDFFPYADRENAY 355
++ ++N V A + T Y DA + A +P + DFF YADR + Y
Sbjct: 355 VNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNY 414
Query: 356 WTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLADA---LALVQHHDAV 412
W+GY+TSRP K R + Y AA L + + + + L A L+L QHHD +
Sbjct: 415 WSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQARRELSLFQHHDGI 474
Query: 413 SGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYC 472
+GT K HV DY +R+ + V+ S+ L +K +P +F L+ S
Sbjct: 475 TGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLL--TKPSIYSPDFSFSYF-TLDDSRW 531
Query: 473 PPSEVDLS---------SGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQ 523
P S V+ S S VV++N L RE ++ V + V+V D +E+Q
Sbjct: 532 PGSGVEDSRTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQ 591
Query: 524 LLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGM 583
+ P+ T Y + F A VPP+G TY+++ + H+
Sbjct: 592 VSPVWSWHHDTLTKTI-----HPQGSTTKYRIIFKARVPPMGLATYVLTISDSKPEHTSY 646
Query: 584 RTVYKSQIRQN----------------DTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNK 627
+ + I + GN L ++ L ++ S +
Sbjct: 647 ASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSEQGLLKSIQLTQDSPHV 706
Query: 628 LLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTILRGPLLDEVHQRINPW 687
+ ++ Y SGAY+F PNG GQ + +G L V +
Sbjct: 707 PVHFKFLKYGVRSHG---DRSGAYLFLPNGPASPVELGQPVVLVTKGKLESSVSVGLPSV 763
Query: 688 IYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERI 747
++Q G +G + E+V ++ +++ S FYTD +G FI+R
Sbjct: 764 VHQTIM-RGGAPEIRNLVDIGSLD-----NTEIVMRLETHIDSGDIFYTDLNGLQFIKRR 817
Query: 748 RDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRR 807
R + P+ NYYP+ G++++D ++ L++L + +GGSS+A G+LE+M RR
Sbjct: 818 RLDK--------LPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRR 869
Query: 808 LVADDNRGVSEALNETV-------CVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEI 860
L +DD RG+ + + + V +K K + P G Q +
Sbjct: 870 LASDDERGLGQGVLDNKPVLHIYRLVLEKVNNCVRPSK----LHPAGYLTSAAHKASQSL 925
Query: 861 YSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGK-------ILLR 913
P + + W + + + +++ + ++ L +L
Sbjct: 926 LDPLDKFIFAE--NEWIGAQ-GQFGGDHPS--AREDLDVSVMRRLTKSSAKTQRVGYVLH 980
Query: 914 LAHLYE 919
+L +
Sbjct: 981 RTNLMQ 986
|
| >1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 Length = 298 | Back alignment and structure |
|---|
| >3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Length = 899 | Back alignment and structure |
|---|
| >1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 282 | Back alignment and structure |
|---|
| >2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Length = 923 | Back alignment and structure |
|---|
| >1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Length = 159 | Back alignment and structure |
|---|
| >1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 Length = 84 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 126 | Back alignment and structure |
|---|
| >1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A* Length = 659 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 929 | |||
| 3bvx_A | 1045 | Alpha-mannosidase 2; family 38 glycoysl hydrolase, | 100.0 | |
| 2wyh_A | 923 | Alpha-mannosidase; hydrolase, glycosidase, glycosi | 100.0 | |
| 3lvt_A | 899 | Glycosyl hydrolase, family 38; PSI, MCSG, structur | 100.0 | |
| 1o7d_A | 298 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 100.0 | |
| 1o7d_D | 282 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 100.0 | |
| 1o7d_C | 159 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 99.97 | |
| 1o7d_B | 84 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 99.9 | |
| 1k1x_A | 659 | 4-alpha-glucanotransferase; 2.40A {Thermococcus li | 99.8 | |
| 1o7d_E | 126 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 99.04 | |
| 3p0b_A | 540 | TT1467 protein; glycoside hydrolase GH57, glycogen | 98.76 | |
| 2b5d_X | 528 | Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2. | 98.69 | |
| 3n98_A | 562 | Alpha-amylase, GH57 family; GH57 family member, br | 98.66 | |
| 3cl6_A | 308 | PUUE allantoinase; URIC acid, nitrogen fixation, h | 94.92 | |
| 3rxz_A | 300 | Polysaccharide deacetylase; structural genomics, P | 94.63 | |
| 3s6o_A | 321 | Polysaccharide deacetylase family protein; ssgcid, | 94.53 | |
| 2y8u_A | 230 | Chitin deacetylase; hydrolase; 1.99A {Emericella n | 89.6 | |
| 2cc0_A | 195 | Acetyl-xylan esterase; hydrolase, carbohydrate est | 89.26 |
| >3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-162 Score=1515.57 Aligned_cols=857 Identities=26% Similarity=0.441 Sum_probs=723.9
Q ss_pred eEecCCCCCCCCceEEEEEecccCCCccchhhhheeecCCcchhhHHHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHh
Q 002383 23 MMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWR 102 (929)
Q Consensus 23 ~~~~~~~~~~~~~~~VhlVpHSH~D~gWl~T~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~ww~ 102 (929)
+.|+.+.+....+++||+|||||+|+|||||+++||. +.++++|++|++.|+++|++||+|+|++||++||+
T Consensus 68 ~~~~~~~~~~~~~~~V~lV~HsH~D~gWl~t~~e~~~--------~~~~~~~~~vl~~L~~~p~~~F~~~e~~~l~~w~~ 139 (1045)
T 3bvx_A 68 IKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQ--------HDTKHILSNALRHLHDNPEMKFIWAEISYFARFYH 139 (1045)
T ss_dssp CCCCGGGSBTTBCEEEEEEEEEECCSSSSSCHHHHHH--------HTHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHH
T ss_pred hhhhccccCCCCceEEEEEecCCCCccccchHHHhhh--------HHHHHHHHHHHHHHHHCCCcEEEEecHHHHHHHHH
Confidence 4455544445558999999999999999999999996 67999999999999999999999999999999999
Q ss_pred ccChHHHHHHHHHHHcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhh
Q 002383 103 DQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAE 182 (929)
Q Consensus 103 ~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l~~~fG~~p~v~W~iD~FGhs~~~p~ll~~~ 182 (929)
+++|+++++||+||++|||||+||||||+|||++||||+||||++||+|++++||+.|++||+|||||||+++|||| ++
T Consensus 140 e~~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG~~~~~~W~pD~FG~s~~lPqil-~~ 218 (1045)
T 3bvx_A 140 DLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL-QK 218 (1045)
T ss_dssp HSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCSSSBCTHHHHHH-HT
T ss_pred HCCHHHHHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHHHHHHHHHHhCCCCceEEcCCCCCccHHHHHHH-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cCCcEEEEeecChHhHHHhhhcCceeEEEeeCCCCCCCCceeeeeCCC-CCCC-----CCC----CCCcccCCC---CCC
Q 002383 183 VGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPK-NYEP-----PSD----NFYFEVGDT---SPI 249 (929)
Q Consensus 183 ~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~-~Y~~-----p~~----~f~f~~~~~---~~p 249 (929)
|||++++|+|++|++++.|+..+.+||+|+|+|+..+||+||||++|. +|+. |++ +|+|+.+.. .||
T Consensus 219 ~Gi~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~Ilt~~~p~~~Y~~~~~~gp~~~~c~~fdf~~l~~~~~~~~ 298 (1045)
T 3bvx_A 219 SGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCP 298 (1045)
T ss_dssp TTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGGGCGGGSSTTSCCCT
T ss_pred cCCCeEEEecccccccccccccCCceEEEeCCCCCCCCCeEEEEeccccccCcccccCCCccccccccccccccccccCc
Confidence 999999999999999999999999999999776666699999999994 6753 322 466666532 345
Q ss_pred ccCC-ccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCcchHHH---HHHHHHHHHHHhcCC--CeeEEEcC
Q 002383 250 VQDD-MNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTW---FRQMDKFIHYVNQDG--RVNALYST 323 (929)
Q Consensus 250 ~~~~-~~i~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~---~~n~~~li~~~N~~~--~~~i~~sT 323 (929)
+.++ ..+.++|++++++.|++++++++..|+++++|+|+|+||+|.+|.+| |+||++||+++|+.+ .++++|||
T Consensus 299 ~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~li~~in~~~~~~~~v~~sT 378 (1045)
T 3bvx_A 299 WKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGT 378 (1045)
T ss_dssp TSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEEEEECC
T ss_pred ccCCcccccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhhhHHHHHHHHHHHHHHhhCCCCCceEEECC
Confidence 4443 46778899999999999999999999999999999999999998766 999999999999764 58999999
Q ss_pred hhhHHHHHHhcC----CCCCCcccCCccccccCCCceeeeeccchhhhHHHHHHhHHHHHHHHHHhhhcc---ccCCCch
Q 002383 324 PSMYIDAKYAAN----ESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGR---NEVGLST 396 (929)
Q Consensus 324 ~~~Yf~al~~~~----~~~p~~~gDffpy~~~~~~yWtGyyTSRp~~K~~~R~~e~~L~~ae~l~~l~~~---~~~~~~~ 396 (929)
+++||++++++. ..||+++||||||+++.++||||||||||.+|+++|++|++|++||+|++++.. .++...+
T Consensus 379 ~~~yf~~l~~~~~~~~~~lp~~~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~aE~l~ala~~~~~~~~~~~L 458 (1045)
T 3bvx_A 379 LQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERL 458 (1045)
T ss_dssp HHHHHHHHHHHHHTTSCCCCEEESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHHHHHHHHHTSCCCGGGCHHHHH
T ss_pred HHHHHHHHHhhcccccccCcccCCcccccccCCcccccceecccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHH
Confidence 999999998753 369999999999999999999999999999999999999999999999999753 4555678
Q ss_pred HHHHHHHHhhhccccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCC---cccccccccccccCC
Q 002383 397 DSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPI---TNFQQCPLLNISYCP 473 (929)
Q Consensus 397 ~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~---~~~~~~~~ln~s~~~ 473 (929)
+++|++|+++||||+||||++++|++||.+||.+|.+.++.++..+++.|+......+..+. .+++.|.+++.+.||
T Consensus 459 ~~~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (1045)
T 3bvx_A 459 EQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPDFSFSYFTLDDSRWPGSGVED 538 (1045)
T ss_dssp HHHHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCTTTCCCCTTSCSEEEECSSSSCTTTCC
T ss_pred HHHHHHHhccccccCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccchhhhccccccccc
Confidence 89999999999999999999999999999999999999999999999999853222111111 223345556777777
Q ss_pred CCccccCCCc---eEEEEEEcCCCceEeEEEEEEEeCCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCC
Q 002383 474 PSEVDLSSGK---SLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVT 550 (929)
Q Consensus 474 ~~~~~~~~~~---~~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (929)
........++ ...|+|||||+|+|+++|+|+|+.+.+.|+|.+|++|++|+++.+.....+....+ ......
T Consensus 539 ~~~~i~~~~~~~~~~~vvvfN~L~~~r~~~V~v~v~~~~~~V~D~~G~~v~~Qi~~~~~~~~~~~~~~~-----~~~~~~ 613 (1045)
T 3bvx_A 539 SRTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTI-----HPQGST 613 (1045)
T ss_dssp CCCEECCBTTTBSEEEEEEEECSSSCEEEEEEEEESCSCEEEEETTCCEECEEEEEEEEEEEETTTTEE-----EEEEEE
T ss_pred ccccccccccccCCceEEEEcCCCcceeeEEEEEeccCceEEEcCCCCEEeEEEeeccccccccccccc-----cccCCC
Confidence 5421000122 56899999999999999999999999999999999999999987643221110000 000012
Q ss_pred CcEEEEEEeecCCCceEEEEEEeCCcccCcccccee----------eec-cccCCCceEEccCeE------EEEEECCCC
Q 002383 551 PSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTV----------YKS-QIRQNDTIEVGPGNL------KLLYSGKRA 613 (929)
Q Consensus 551 ~~~~l~f~~~vPplG~~~y~i~~~~~~~~~~~~s~~----------~~~-~~~~~~~~~ieN~~~------~v~~~~~~G 613 (929)
..|+|+|.++||||||++|.|............+++ ... .....+...|||+++ +|+||+ +|
T Consensus 614 ~~~~L~f~a~vP~lG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~leN~~~~~~~~~~v~fd~-~G 692 (1045)
T 3bvx_A 614 TKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSE-QG 692 (1045)
T ss_dssp EEEEEEEEEEECTTEEEEEEEEECSSCCTTEEECEEEEECSSCCCCCCTTCSSCCEEECCCCEEEECTTSCEEEECT-TS
T ss_pred CcEEEEEEeccCCceeEEEEEEecCCccccccccceeecccccccccccccccCCCceeecccccccccccEEEECC-CC
Confidence 457899999999999999999876543210000011 000 001234578999999 999995 99
Q ss_pred eEEEEEecCCCcEEEEEEEEEEeecCCCCCCCCCCcceEEccCCCC-ccCCCCccEEEEEEcCceEEEEEEEcCeEEEEE
Q 002383 614 KLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIEPEGQLSFTILRGPLLDEVHQRINPWIYQVT 692 (929)
Q Consensus 614 ~l~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgaYiF~P~~~~-~~~~~~~~~i~v~~G~l~~~v~~~~~~~~~~~i 692 (929)
.|+||+||++|+++.+.++|.+|.+..| ++.||||+|+|++.+ +.... ...+.+++|||+++|++.+ ++++|++
T Consensus 693 ~L~si~dk~~g~e~~~~~~f~~Y~~~~~---~~~sgaY~F~P~~~~~~~~~~-~~~~~v~~Gpl~~ev~~~~-~~i~q~i 767 (1045)
T 3bvx_A 693 LLKSIQLTQDSPHVPVHFKFLKYGVRSH---GDRSGAYLFLPNGPASPVELG-QPVVLVTKGKLESSVSVGL-PSVVHQT 767 (1045)
T ss_dssp CEEEEECSTTSCCEEEEEEEEEECBCSS---SCCCCSSCCCBSSSCEECCCC-SCCEEEEECSSCEEEEEEE-TTEEEEE
T ss_pred cEEEEEEcCCCeEEEEeeEEEEEecccC---CCCCcceEecCCCCCcccccC-CceEEEEeCCeEEEEEEEE-eeEEEEE
Confidence 9999999999999999999999976655 568999999999875 43333 4567889999999999999 5899999
Q ss_pred EEecCCCceEEEEEECcccccCCCCcEEEEEEEeeccCCCeEEEcCCCcceeeeccccccCcccccccccccceeeeeee
Q 002383 693 RVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLG 772 (929)
Q Consensus 693 rLy~~~~~ie~e~~v~~~~~~~~~~~ev~~~f~t~i~s~~~fyTDsnG~~~i~R~~~~r~~w~~~~~~pv~~NyYP~~s~ 772 (929)
|| ++++|||+++|+ |.+..|||++++|+|+|+|+..||||+|||++++|+++. .+|+++|||||+++
T Consensus 768 rL--~~~~ieie~~Vd---~~~~~~~el~~rf~t~i~s~~~fyTD~nG~~~ikR~~~~--------~~p~~~NyYPv~s~ 834 (1045)
T 3bvx_A 768 IM--RGGAPEIRNLVD---IGSLDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLD--------KLPLQANYYPIPSG 834 (1045)
T ss_dssp EE--SSSSCEEEEEEC---CTTCTTEEEEEEEEECCCCTTEEEEEETTTEEEEEECCT--------TSCGGGGCEEESSE
T ss_pred EE--CCeeEEEEEEEe---cCCCCCeEEEEEeecccCCCCeEEEecCCceeEEcCCCC--------CCCcccceEEeeee
Confidence 99 888999999996 444569999999999999999999999999999999874 47899999999999
Q ss_pred EEEEeccceeEEEeccccccccccCCeEEEEEEeeecccCCcCccccccccccccccccCeEEEeEEEEEeccccchhh-
Q 002383 773 IYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAK- 851 (929)
Q Consensus 773 ~~I~D~~~~ltvl~dr~~G~ssl~~G~iElml~Rr~~~DD~rGvge~l~e~~~~~~~~~g~~~~~~~~l~~~~~~~~~~- 851 (929)
|+|+|++.||||++||+|||||+++|+||||||||+++||+|||||||||+ ++++|+|||+|++...++.
T Consensus 835 ~~i~D~~~~ltvl~drs~G~sSl~~G~lElmlhRrl~~DD~rGvge~l~d~---------~~~~~~~~l~l~~~~~~~~~ 905 (1045)
T 3bvx_A 835 MFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDN---------KPVLHIYRLVLEKVNNCVRP 905 (1045)
T ss_dssp EEEECSSEEEEEEESSCEEEECCSTTEEEEEEEEEBCSCCSSSCCSCBCCC---------CCEEEEEEEEEEECTTSCCC
T ss_pred EEEEcCCeeEEEEecCCccccccCCCeEEEEEeeeeccCCcccccccccCC---------ceeeeEEEEEEecccccccc
Confidence 999999999999999999999999999999999999999999999999986 6799999999998765441
Q ss_pred -----------hcccchhhhccCceeeeeccCCCccccccccccccCCcCCCCCCceeEEEeEecCCCc-----EEEEee
Q 002383 852 -----------WRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGK-----ILLRLA 915 (929)
Q Consensus 852 -----------~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~~~lP~~vhlltl~~~~~~~-----~llRl~ 915 (929)
..|..++++++||++|++.... + .....+|+++.. +|||||||||||++++++ +||||
T Consensus 906 ~~~~~~~~~s~~~~~~~~~l~~p~~~~~~~~~~--~-~~~~~~~~~l~~--~lP~~vhlltL~~~~~~~~~~~~~ll~L- 979 (1045)
T 3bvx_A 906 SKLHPAGYLTSAAHKASQSLLDPLDKFIFAENE--W-IGAQGQFGGDHP--SAREDLDVSVMRRLTKSSAKTQRVGYVL- 979 (1045)
T ss_dssp CTTCSEECCCHHHHHHHHHHHSCCEEEEECSSC--C-TTBCSEECTTSC--CCCTTEEEEEEEECSCTTCSEEEEEEEE-
T ss_pred cccccccccCHHHHHHHHHHhCCcceeeccCcc--c-ccccccCCcccc--cCCCCEEEEEeEecCCCCccCceEEEEE-
Confidence 2456788999999999886332 2 235667888875 999999999999999988 99999
Q ss_pred eh--hccccccccCC
Q 002383 916 HL--YERTQIYQLCQ 928 (929)
Q Consensus 916 h~--~~~~e~~~~s~ 928 (929)
|. |+.+||+. |+
T Consensus 980 ~~~~~~~~~~~~-s~ 993 (1045)
T 3bvx_A 980 HRTNLMQCGTPE-EH 993 (1045)
T ss_dssp EECCCCCCSCCC-CC
T ss_pred eeeccccCcCcc-cC
Confidence 66 89999876 44
|
| >2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* | Back alignment and structure |
|---|
| >3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 | Back alignment and structure |
|---|
| >1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 | Back alignment and structure |
|---|
| >1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 | Back alignment and structure |
|---|
| >1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 | Back alignment and structure |
|---|
| >1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A* | Back alignment and structure |
|---|
| >1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 | Back alignment and structure |
|---|
| >3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A | Back alignment and structure |
|---|
| >2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4 | Back alignment and structure |
|---|
| >3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A* | Back alignment and structure |
|---|
| >3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A | Back alignment and structure |
|---|
| >3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
| >3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6 | Back alignment and structure |
|---|
| >2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans} | Back alignment and structure |
|---|
| >2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 929 | ||||
| g1o7d.2 | 490 | b.30.5.6 (C:488-585,D:603-875,E:885-1007) Lysosoma | 1e-117 | |
| g1o7d.3 | 330 | c.6.2.1 (A:51-342,B:347-384) Lysosomal alpha-manno | 1e-113 | |
| d3bvua2 | 522 | b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II { | 1e-107 | |
| d3bvua3 | 381 | c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fru | 1e-105 | |
| d1k1xa3 | 310 | c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-te | 2e-43 | |
| d3bvua1 | 111 | a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fr | 3e-26 | |
| g1o7d.1 | 95 | a.8.3.1 (B:385-422,C:431-487) Lysosomal alpha-mann | 9e-25 |
| >d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 522 | Back information, alignment and structure |
|---|
| >d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 381 | Back information, alignment and structure |
|---|
| >d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Length = 310 | Back information, alignment and structure |
|---|
| >d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 111 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 929 | |||
| d3bvua3 | 381 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 100.0 | |
| g1o7d.3 | 330 | Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax | 100.0 | |
| d3bvua2 | 522 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 100.0 | |
| g1o7d.2 | 490 | Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax | 100.0 | |
| d1k1xa3 | 310 | 4-alpha-glucanotransferase, N-terminal domain {Arc | 99.97 | |
| d3bvua1 | 111 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 99.94 | |
| g1o7d.1 | 95 | Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax | 99.93 | |
| d2b5dx2 | 404 | Alpha-amylase AmyC {Thermotoga maritima [TaxId: 23 | 98.31 | |
| d1ufaa2 | 412 | Hypothetical protein TT1467, N-terminal domain {Th | 97.72 | |
| d1z7aa1 | 301 | Hypothetical protein PA1517 {Pseudomonas aeruginos | 92.71 | |
| d2c1ia1 | 196 | Peptidoglycan GlcNAc deacetylase C-terminal domain | 91.57 | |
| d2cc0a1 | 192 | Acetyl-xylan esterase {Streptomyces lividans [TaxI | 85.16 | |
| d2j13a1 | 235 | Putative polysaccharide deacetylase BA0424 {Bacill | 82.66 | |
| d2c71a1 | 204 | Xylanase XynA C-terminal domain {Clostridium therm | 80.53 |
| >d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: alpha-mannosidase domain: Golgi alpha-mannosidase II species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=3.4e-83 Score=707.40 Aligned_cols=324 Identities=30% Similarity=0.571 Sum_probs=302.1
Q ss_pred cceeeEecCCCCCCCCceEEEEEecccCCCccchhhhheeecCCcchhhHHHHHHHHHHHHHHHhCCCCeEEEechhHHH
Q 002383 19 ESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQ 98 (929)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~VhlVpHSH~D~gWl~T~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~ 98 (929)
++-.|.|+.+.....+|++||||||||+|+|||||+++|+. ..+++||++|++.|+++|++||+|+|+++|.
T Consensus 34 q~~~~~~~~~~~~~~~kl~VhlV~HsH~D~gWl~t~~e~~~--------~~~~~il~~~l~~l~~~p~~~F~~~~~~~~~ 105 (381)
T d3bvua3 34 QGWNIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQ--------HDTKHILSNALRHLHDNPEMKFIWAEISYFA 105 (381)
T ss_dssp TSCCCCCCGGGCBTTBCEEEEEEEEEECCSSSSSCHHHHHH--------HTHHHHHHHHHHHHHHCTTCCEEECCHHHHH
T ss_pred CCcceeechhhcCcCCCcEEEEeCCCCCChhhcCcHHHHHH--------HHHHHHHHHHHHHHHHCCCCEEEEechHHHH
Confidence 56677899998888899999999999999999999999996 6789999999999999999999999999999
Q ss_pred HHHhccChHHHHHHHHHHHcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHH
Q 002383 99 RWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYL 178 (929)
Q Consensus 99 ~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l~~~fG~~p~v~W~iD~FGhs~~~p~l 178 (929)
+||++++|+.+++||+||++||||||||||||+|||++|+|++||||++||+|++++||+.|++||+|||||||++||+|
T Consensus 106 ~w~~~~~pe~~~~vk~lV~~GrlEivgg~wv~~De~~~~~es~Irql~~G~~~l~~~fG~~p~~~w~~D~FGhs~~lp~i 185 (381)
T d3bvua3 106 RFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYI 185 (381)
T ss_dssp HHHTTSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECSSSSBCTHHHHH
T ss_pred HHHHHcCHHHHHHHHHHHHCCCEEEeCCeeecccccCCCHHHHHHHHHHHHHHHHHHcCCCCceEEeeCCCCccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCcEEEEeecChHhHHHhhhcCceeEEEeeCCCCCCCCceeeeeCCC-CCCCC---------CCCCCcccCC---
Q 002383 179 LSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPK-NYEPP---------SDNFYFEVGD--- 245 (929)
Q Consensus 179 l~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~-~Y~~p---------~~~f~f~~~~--- 245 (929)
| ++|||++++++|++|++++.++..+.+||+|++.++..+|++||||++|. +|++| +++|+|.++.
T Consensus 186 l-~~~Gi~~~~~~R~~~~~~~~~~~~k~lef~w~~~W~~~~~s~ilth~~~~~~Y~~p~~~~~d~~~~~~f~f~~~~~~~ 264 (381)
T d3bvua3 186 L-QKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFG 264 (381)
T ss_dssp H-HTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGGGCGGGSSTTS
T ss_pred H-HhcCCCeEEEEecchhhhcccccccccceeecccccCCCCCceeEecccccccCCcccCCCCcccccccccccccccC
Confidence 9 99999999999999999999999999999999998888899999999997 67665 1367777653
Q ss_pred -CCCCccCCccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCcchHHH---HHHHHHHHHHHhcCC--CeeE
Q 002383 246 -TSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTW---FRQMDKFIHYVNQDG--RVNA 319 (929)
Q Consensus 246 -~~~p~~~~~~i~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~---~~n~~~li~~~N~~~--~~~i 319 (929)
.+++..++..++++||+++++.|++++++++.+|+||+||+|+|+||+|.+|.+| |+||+|||+++|+.. ++++
T Consensus 265 ~~~p~~~~~~~i~~~nv~~r~~~~~~~~~~~a~~~~tn~vL~p~G~Df~y~~a~~w~~~~~n~~kli~~iN~~~~~~v~i 344 (381)
T d3bvua3 265 LSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQA 344 (381)
T ss_dssp CCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEEE
T ss_pred CCCCcccCCcccchhHHHHHHHHHHHHHHHHhhccCCCeEEEccccCCCCCccchHHHHHHhHHHHHHHHHhCCCCCeEE
Confidence 3455556668999999999999999999999999999999999999999999987 999999999999763 6899
Q ss_pred EEcChhhHHHHHHhc----CCCCCCcccCCcccccc
Q 002383 320 LYSTPSMYIDAKYAA----NESWPLKTDDFFPYADR 351 (929)
Q Consensus 320 ~~sT~~~Yf~al~~~----~~~~p~~~gDffpy~~~ 351 (929)
+||||++||+||+++ +.+||+++||||||||+
T Consensus 345 ~~ST~~~Yf~al~~~~~~~~~~~P~~~gDFfpYad~ 380 (381)
T d3bvua3 345 QFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADR 380 (381)
T ss_dssp EECCHHHHHHHHHHHHHTTSCCCCEEESCBCSCBSS
T ss_pred EECCHHHHHHHHHHHHhhcCCCCCCcCCCCcCCCCC
Confidence 999999999999864 56899999999999985
|
| >d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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| >d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
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| >d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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| >d2b5dx2 c.6.2.4 (X:1-404) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1ufaa2 c.6.2.4 (A:1-412) Hypothetical protein TT1467, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1z7aa1 c.6.2.6 (A:4-304) Hypothetical protein PA1517 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d2c1ia1 c.6.2.3 (A:268-463) Peptidoglycan GlcNAc deacetylase C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
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| >d2cc0a1 c.6.2.3 (A:1-192) Acetyl-xylan esterase {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
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| >d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase BA0424 {Bacillus anthracis [TaxId: 1392]} | Back information, alignment and structure |
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| >d2c71a1 c.6.2.3 (A:480-683) Xylanase XynA C-terminal domain {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|