Citrus Sinensis ID: 002391
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 928 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LNQ4 | 1216 | Putative phospholipid-tra | yes | no | 0.959 | 0.731 | 0.716 | 0.0 | |
| Q9SGG3 | 1228 | Putative phospholipid-tra | no | no | 0.963 | 0.728 | 0.703 | 0.0 | |
| Q9LVK9 | 1243 | Putative phospholipid-tra | no | no | 0.952 | 0.711 | 0.710 | 0.0 | |
| Q9SLK6 | 1240 | Phospholipid-transporting | no | no | 0.954 | 0.714 | 0.702 | 0.0 | |
| Q9LI83 | 1202 | Phospholipid-transporting | no | no | 0.932 | 0.719 | 0.577 | 0.0 | |
| Q9SX33 | 1200 | Putative phospholipid-tra | no | no | 0.940 | 0.727 | 0.577 | 0.0 | |
| Q9SAF5 | 1203 | Putative phospholipid-tra | no | no | 0.943 | 0.728 | 0.569 | 0.0 | |
| P57792 | 1184 | Putative phospholipid-tra | no | no | 0.940 | 0.737 | 0.558 | 0.0 | |
| Q9LK90 | 1189 | Putative phospholipid-tra | no | no | 0.937 | 0.731 | 0.538 | 0.0 | |
| Q9XIE6 | 1213 | Phospholipid-transporting | no | no | 0.887 | 0.679 | 0.475 | 0.0 |
| >sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1360 bits (3521), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 646/902 (71%), Positives = 761/902 (84%), Gaps = 12/902 (1%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGS--VQG--CPRVIYCNQPHMHKKRPLKYCT 56
M RGRIR+KLR S +YTF CLRP +E + +QG R +YCNQPHMHKK+PLKY +
Sbjct: 1 MARGRIRSKLRLSHIYTFGCLRPSADEGQDPHPIQGPGFSRTVYCNQPHMHKKKPLKYRS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
NY+STT+YN ++FPK L+EQF+R AN YFL+AA+LSV PLSPF+ SM+ PL VVG+S
Sbjct: 61 NYVSTTRYNLITFFPKCLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
M KEALEDW RFMQD ++NA KV VH +G F + W+KI VGDIVKVEKD FFPADLL
Sbjct: 121 MLKEALEDWSRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LSSSYEDGICYVETMNLDGETNLKVKR++E T L++ ++FK+FTG ++CE+PNPSLYTF
Sbjct: 181 LSSSYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
VGN+EY+R+++ +DPSQILLRDSKLRNT +VYG V+FTGHD+KVMQN+T SPSKRS IEK
Sbjct: 241 VGNLEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEK 300
Query: 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
MD II+ L +L+LIS ISS GFA + + P+WWYL+P+E + NP P+ G HL
Sbjct: 301 TMDYIIYTLLVLLILISCISSSGFAWETKFHMPKWWYLRPEEPENLTNPSNPVYAGFVHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TAL+LYGYLIPISLYVSIE+VK LQA FIN+D+ MYD ESG+PA ARTSNLNEELGQVD
Sbjct: 361 ITALLLYGYLIPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQVD 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESA-NAKHK 475
TILSDKTGTLTCNQMDFLKCS+AGT+YGV SEVE+AAA+QMA+DL+E S+ + +
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTPR 480
Query: 476 NSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535
+IE+E+ IT + IKGF FED RLMDGNWL+EP+ D +LLFFRILAICHT
Sbjct: 481 AQARDIEVESSITP------RIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHT 534
Query: 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREF 595
AIPELNEETG TYEAESPDEA+FL AA EFGF F++RTQSSV++ ER GQ +ERE+
Sbjct: 535 AIPELNEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREY 594
Query: 596 KILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYG 655
K+LNLLDFTSKRKRMSV+VRDE+GQILLLCKGADSIIF+RL+KNG++Y TTK LNEYG
Sbjct: 595 KVLNLLDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYG 654
Query: 656 EAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAV 715
EAGLRTLAL+Y++LDE EYSAWN+EF KAK+SIG+DR+ LE +SDM+EKDLILVGATAV
Sbjct: 655 EAGLRTLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAV 714
Query: 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV 775
EDKLQKGVPQCIDKLAQAGLK+WVLTGDKMETAINIG++CSLLRQGMKQICIT +NS+
Sbjct: 715 EDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSEGA 774
Query: 776 GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVE 835
+ AK AVKDNIL QIT A QM+KLE+DPHAA+ALII+GKTL YALED+MK+ FL LAV+
Sbjct: 775 SQDAK-AVKDNILNQITKAVQMVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALAVD 833
Query: 836 CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIV 895
CASVICCRVSPKQKALVTRLVKEGTGK TLAIGDGANDVGMIQEADIG+GISGVEGMQ V
Sbjct: 834 CASVICCRVSPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQAV 893
Query: 896 LS 897
++
Sbjct: 894 MA 895
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1344 bits (3479), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/910 (70%), Positives = 762/910 (83%), Gaps = 16/910 (1%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGS--VQG--CPRVIYCNQPHMHKKRPLKYCT 56
M RGRIR+KLR S LYTF CLRP E + S +QG R ++CNQPHMHKK+PL+Y +
Sbjct: 1 MARGRIRSKLRLSLLYTFGCLRPATLEGQDSQPIQGPGFSRTVFCNQPHMHKKKPLRYRS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
NY+STT+YN ++FPK+L+EQF+R AN+YFL+AA+LSV PLSPF+ SM+ PL VVG+S
Sbjct: 61 NYVSTTRYNLITFFPKSLYEQFHRAANLYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
M KEALEDWRRFMQD ++NARK VH +GVF + W+K+ VGDIVKVEKD+FFPADLL
Sbjct: 121 MLKEALEDWRRFMQDVKINARKTCVHKSDGVFRQRKWKKVSVGDIVKVEKDEFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LSSSYEDGICYVETMNLDGETNLKVKR++E + PL++DE+FK F T++CE+PNP+LYTF
Sbjct: 181 LSSSYEDGICYVETMNLDGETNLKVKRSLEVSLPLDDDESFKNFMATIRCEDPNPNLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
VGN+E++R+ + +DPSQILLRDSKLRNT +VYG V+FTG D+KVMQN+T SPSKRS IE+
Sbjct: 241 VGNLEFERQTFPLDPSQILLRDSKLRNTTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIER 300
Query: 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
MD II+ L +L+LIS ISS GFA + + P+ WYL+P E + NP P+ G+ HL
Sbjct: 301 TMDYIIYTLLVLLILISCISSSGFAWETEFHMPKMWYLRPGEPIDFTNPINPIYAGVVHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TAL+LYGYLIPISLYVSIE+VK QA FINQD+ MYDDESG+PA ARTSNLNEELGQV
Sbjct: 361 ITALLLYGYLIPISLYVSIEVVKVWQASFINQDLHMYDDESGVPANARTSNLNEELGQVH 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHK- 475
TILSDKTGTLTCNQMDFLKCS+AGT+YGV SEVE+AAAKQMA+DLEE S+ + +
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQT 480
Query: 476 --------NSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFF 527
+ EIE+E N+ N + IKGF FED+RLM+GNWL+E + +L FF
Sbjct: 481 KVYGTWDSSRTQEIEVEG---DNNYNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFF 537
Query: 528 RILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPK 587
RILAICHTAIPELNEETG TYEAESPDEA+FL AAREFGFEF++RTQSSVFIRER+
Sbjct: 538 RILAICHTAIPELNEETGKYTYEAESPDEASFLAAAREFGFEFFKRTQSSVFIRERFSGS 597
Query: 588 GQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEAT 647
GQ +ERE+K+LNLL+FTSKRKRM+VIVRDE+GQILLLCKGADSIIF+RL+KNG+ Y T
Sbjct: 598 GQIIEREYKVLNLLEFTSKRKRMTVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPT 657
Query: 648 TKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDL 707
T+ L EYGEAGLRTLALAY++LDE EY+AWNSEF KAK+SIG+DR+ LE +DM+EK+L
Sbjct: 658 TRHLTEYGEAGLRTLALAYRKLDEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKEL 717
Query: 708 ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICI 767
IL+GATAVEDKLQKGVPQCIDKLAQAGLK+WVLTGDKMETAINIGFACSLLRQGM+QICI
Sbjct: 718 ILIGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICI 777
Query: 768 TALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKH 827
T++NS+ + +K VK+NIL Q+T A QM+KLE+DPHAA+ALII+GKTL YALEDDMK+
Sbjct: 778 TSMNSEGGSQDSKRVVKENILNQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALEDDMKY 837
Query: 828 HFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887
FL LAV+CASVICCRVSPKQKALV RLVKEGTGKTTLAIGDGANDVGMIQEADIG+GIS
Sbjct: 838 QFLALAVDCASVICCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGIS 897
Query: 888 GVEGMQIVLS 897
GVEGMQ V++
Sbjct: 898 GVEGMQAVMA 907
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 1342 bits (3472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/905 (71%), Positives = 750/905 (82%), Gaps = 21/905 (2%)
Query: 12 RSQLYTFACLRPHVNETEG----SVQGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFF 67
+S YTF CLRP E +G + G R+++CNQPH+H + L+Y +NY+STT+YN
Sbjct: 12 KSHFYTFKCLRPKTLEDQGPHIINGPGYTRIVHCNQPHLHLAKVLRYTSNYVSTTRYNLI 71
Query: 68 SYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127
++ PK L+EQF+RVAN YFL+AA+LSV PLSPF+ SM+ PL VVG+SM KEALEDWRR
Sbjct: 72 TFLPKCLYEQFHRVANFYFLVAAILSVFPLSPFNKWSMIAPLIFVVGLSMGKEALEDWRR 131
Query: 128 FMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICY 187
FMQD +VN+RK +VH G+G F + W+K++VGD+VKVEKDQFFPADLL LSSSYEDGICY
Sbjct: 132 FMQDVKVNSRKATVHRGDGDFGRRKWKKLRVGDVVKVEKDQFFPADLLLLSSSYEDGICY 191
Query: 188 VETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELY 247
VETMNLDGETNLKVKR ++ T PL D+ F+ F+GT+KCE+PNP+LYTFVGN+EYD ++Y
Sbjct: 192 VETMNLDGETNLKVKRCLDVTLPLERDDTFQSFSGTIKCEDPNPNLYTFVGNLEYDGQVY 251
Query: 248 AIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFA 307
+DPSQILLRDSKLRNT++VYG V+FTGHD+KVMQN+T SPSKRS IEK+MD II+ LFA
Sbjct: 252 PLDPSQILLRDSKLRNTSYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFA 311
Query: 308 ILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLI 367
+LVL+S ISS+GFAV WWYL+P + + NP P + HL+TA++LYGYLI
Sbjct: 312 LLVLVSFISSLGFAVMTKMHMGDWWYLRPDKPERLTNPRNPFHAWVVHLITAVLLYGYLI 371
Query: 368 PISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLT 427
PISLYVSIE+VK LQA FINQD+ MYD ESG PAQARTSNLNEELGQVDTILSDKTGTLT
Sbjct: 372 PISLYVSIELVKVLQATFINQDLQMYDSESGTPAQARTSNLNEELGQVDTILSDKTGTLT 431
Query: 428 CNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSG--------- 478
CNQMDFLKCS+AGT+YGV SEVELAAAKQMAIDL+E+ E + G
Sbjct: 432 CNQMDFLKCSIAGTSYGVRASEVELAAAKQMAIDLDEEQGEEVTHLPRTRGRMHGYAKMP 491
Query: 479 ----SEIELETVITSNDGNDFKRR--IKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAI 532
S+IELETVIT+ D D + IKGF+FED RLM GNWL EPN D +L+F RILA+
Sbjct: 492 SKTSSDIELETVITATDEGDQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDILMFLRILAV 551
Query: 533 CHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVE 592
CHTAIPE++E+TG TYEAESPDE AFLVAA EFGFEF +RTQSSVFI ER+ GQPVE
Sbjct: 552 CHTAIPEVDEDTGKCTYEAESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH--SGQPVE 609
Query: 593 REFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLN 652
RE+K+LN+LDFTSKRKRMSVIVRDE GQILLLCKGADSIIF+RLSKNG+ Y EAT+K LN
Sbjct: 610 REYKVLNVLDFTSKRKRMSVIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEATSKHLN 669
Query: 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGA 712
YGEAGLRTLAL+Y++LDE+EYS WNSEF KAK+S+GADR+ LE VSDMMEK+LILVGA
Sbjct: 670 GYGEAGLRTLALSYRKLDETEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGA 729
Query: 713 TAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNS 772
TAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG+ACSLLRQGMKQI I N
Sbjct: 730 TAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIYIALRNE 789
Query: 773 DSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGL 832
+ + + A ++NILMQI NASQMIKLE+DPHAA+ALII+GKTL YALEDD+K+ FL L
Sbjct: 790 EGSSQDPEAAARENILMQIINASQMIKLEKDPHAAFALIIDGKTLTYALEDDIKYQFLAL 849
Query: 833 AVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGM 892
AV+CASVICCRVSPKQKALVTRL KEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEGM
Sbjct: 850 AVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGM 909
Query: 893 QIVLS 897
Q V++
Sbjct: 910 QAVMA 914
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SLK6|ALA6_ARATH Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1335 bits (3455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/905 (70%), Positives = 758/905 (83%), Gaps = 19/905 (2%)
Query: 12 RSQLYTFACLRPHVNETEG----SVQGCPRVIYCNQPHMH-KKRPLKYCTNYISTTKYNF 66
+S YTF CLRP + +G + G R+++CNQPH+H + ++Y +NY+STT+YN
Sbjct: 12 KSHFYTFRCLRPKTLDDQGPHVINGPGYTRIVHCNQPHLHLATKLIRYRSNYVSTTRYNL 71
Query: 67 FSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126
++ PK L+EQF+RVAN YFL+AA+LSV PLSPF+ SM+ PL VVG+SM KEALEDWR
Sbjct: 72 LTFLPKCLYEQFHRVANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMGKEALEDWR 131
Query: 127 RFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGIC 186
RFMQD EVN+RK SVH G+G F + W++I+VGDIV+VEKD+FFPADLL LSSSYEDGIC
Sbjct: 132 RFMQDVEVNSRKASVHKGSGDFGRRTWKRIRVGDIVRVEKDEFFPADLLLLSSSYEDGIC 191
Query: 187 YVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDREL 246
YVETMNLDGETNLKVKR ++AT L +DE+F+ F+GT+KCE+PNP+LYTFVGN+E D ++
Sbjct: 192 YVETMNLDGETNLKVKRCLDATLALEKDESFQNFSGTIKCEDPNPNLYTFVGNLECDGQV 251
Query: 247 YAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILF 306
Y +DP+QILLRDSKLRNTA+VYG V+FTGHD+KVMQN+T SPSKRS IEK+MD II+ LF
Sbjct: 252 YPLDPNQILLRDSKLRNTAYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLF 311
Query: 307 AILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYL 366
A+L+ +S ISS+GFAV +WWYL+P + + NP PL + HL+TAL+LYGYL
Sbjct: 312 ALLLTVSFISSLGFAVMTKLLMAEWWYLRPDKPESLTNPTNPLYAWVVHLITALLLYGYL 371
Query: 367 IPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTL 426
IPISLYVSIE+VK LQA FINQD+ +YD ESG PAQARTSNLNEELGQVDTILSDKTGTL
Sbjct: 372 IPISLYVSIEVVKVLQAHFINQDLQLYDSESGTPAQARTSNLNEELGQVDTILSDKTGTL 431
Query: 427 TCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN---------- 476
TCNQMDFLKCS+AGT+YGV SEVELAAAKQMA+DLEE+ E AN
Sbjct: 432 TCNQMDFLKCSIAGTSYGVRASEVELAAAKQMAMDLEEKGEEVANLSMNKGRTQRYAKLA 491
Query: 477 --SGSEIELETVITSNDGNDFKRR--IKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAI 532
+ S+ ELETV+T++D D K+ +KGF+FED+RLM+ NWL EPN D +L+FFRILA+
Sbjct: 492 SKTSSDFELETVVTASDEKDQKQNTGVKGFSFEDNRLMNENWLNEPNSDDILMFFRILAV 551
Query: 533 CHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVE 592
CHTAIPE++E+TG TYEAESPDE AFLVA+REFGFEF +RTQSSVFI ER+ GQPV+
Sbjct: 552 CHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEFTKRTQSSVFIAERFSSSGQPVD 611
Query: 593 REFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLN 652
RE+KILNLLDFTSKRKRMS IVRDE+GQILLLCKGADSIIF+RLSK+G+ Y AT+K LN
Sbjct: 612 REYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADSIIFERLSKSGKEYLGATSKHLN 671
Query: 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGA 712
YGEAGLRTLAL Y++LDE+EY+AWNSEF KAK+S+GADR+ LE VSDMMEK+LILVGA
Sbjct: 672 VYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGA 731
Query: 713 TAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNS 772
TAVEDKLQKGVPQCID LAQAGLKIWVLTGDKMETAINIG+ACSLLRQGMKQI I+ N
Sbjct: 732 TAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQISISLTNV 791
Query: 773 DSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGL 832
+ + ++ A K++ILMQITNASQMIK+E+DPHAA+ALII+GKTL YAL+DD+K+ FL L
Sbjct: 792 EESSQNSEAAAKESILMQITNASQMIKIEKDPHAAFALIIDGKTLTYALKDDVKYQFLAL 851
Query: 833 AVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGM 892
AV+CASVICCRVSPKQKALVTRL KEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEGM
Sbjct: 852 AVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGM 911
Query: 893 QIVLS 897
Q V++
Sbjct: 912 QAVMA 916
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LI83|ALA10_ARATH Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/906 (57%), Positives = 665/906 (73%), Gaps = 41/906 (4%)
Query: 10 LRRSQLYTFACLRPHVNETEGSV--QGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFF 67
L S++Y++ C + E ++ G RV+YCN+P Y NY+ +TKY
Sbjct: 11 LHLSKIYSYTCGKSSFQEDHSNIGGPGFSRVVYCNEPGSPAAERRNYAGNYVRSTKYTVA 70
Query: 68 SYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127
S+FPK+LFEQF RVAN YFL+ +LS+T LSP+ VS LLPLA+V+ +M KE +EDWRR
Sbjct: 71 SFFPKSLFEQFRRVANFYFLVTGILSLTDLSPYGAVSALLPLALVISATMVKEGIEDWRR 130
Query: 128 FMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICY 187
QD EVN RKV VH GNG+F + W ++VGDIV+VEKD+FFPADLL LSSSYED +CY
Sbjct: 131 KQQDIEVNNRKVKVHDGNGIFRQEEWRNLRVGDIVRVEKDEFFPADLLLLSSSYEDSVCY 190
Query: 188 VETMNLDGETNLKVKRAMEATSPL-NEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDREL 246
VETMNLDGETNLKVK+ +EATS L N+D FK+F G V+CE+PN +LY FVG + + E
Sbjct: 191 VETMNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEER 250
Query: 247 YAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILF 306
+ + QILLRDSKLRNT +VYG+V+FTGHD+KV+QN+T PSKRS IE+ MDKII+++F
Sbjct: 251 FPLSIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMF 310
Query: 307 AILVLISLISSIGFAV-----KINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALI 361
++ L+S + SI F V K+ + WYLKP + D++F+P + + + H TA +
Sbjct: 311 GLVFLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIYHFFTATM 370
Query: 362 LYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421
LY Y IPISLYVSIEIVK LQ+IFIN+DI MY +E+ PAQARTSNLNEELG VDTILSD
Sbjct: 371 LYSYFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEELGMVDTILSD 430
Query: 422 KTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEI 481
KTGTLTCN M+F+KCS+AG AYG +EVE A MA+ ++ GS +
Sbjct: 431 KTGTLTCNSMEFIKCSIAGKAYGRGITEVERA----MAV--------------RSGGSPL 472
Query: 482 ELET--VITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPE 539
E V+ G ++KGFNFED R+M+GNW+++P L FFR+LA+CHTAIPE
Sbjct: 473 VNEDLDVVVDQSGP----KVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIPE 528
Query: 540 LNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILN 599
+EE+GN++YEAESPDEAAF+VAAREFGFEF+ RTQ+ + RE G+ VER +++LN
Sbjct: 529 TDEESGNVSYEAESPDEAAFVVAAREFGFEFFNRTQNGISFRELDLVSGEKVERVYRLLN 588
Query: 600 LLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659
+L+F S RKRMSVIVRD+DG++LLL KGAD+++F+RL+KNGR +E T + +N+Y +AGL
Sbjct: 589 VLEFNSTRKRMSVIVRDDDGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAGL 648
Query: 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKL 719
RTL LAY+++DE+EY +N F +AK+S+ DREA ++ ++D ME+DLIL+GATAVEDKL
Sbjct: 649 RTLVLAYREVDENEYIEFNKSFNEAKASVSEDREALIDEITDKMERDLILLGATAVEDKL 708
Query: 720 QKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAA 779
Q GVP+CIDKLAQAG+KIWVLTGDKMETAINIGFA SLLRQ MKQI I L + +
Sbjct: 709 QNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFASSLLRQEMKQIIIN-LETPQIKSLE 767
Query: 780 KEAVKDNI--------LMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLG 831
K KD I +MQ+ ++ A+ALII+GK+L YALED++K FL
Sbjct: 768 KSGGKDEIELASRESVVMQLQEGKALLAASGASSEAFALIIDGKSLTYALEDEIKKMFLD 827
Query: 832 LAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEG 891
LA CASVICCR SPKQKALVTRLVK GTGKTTLAIGDGANDVGM+QEADIG+GISGVEG
Sbjct: 828 LATSCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEG 887
Query: 892 MQIVLS 897
MQ V+S
Sbjct: 888 MQAVMS 893
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SX33|ALA9_ARATH Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1060 bits (2740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/901 (57%), Positives = 665/901 (73%), Gaps = 28/901 (3%)
Query: 10 LRRSQLYTFACLRPHVNETEGSV--QGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFF 67
L+ S+LYT C + + + G RV+YCN+P + Y NY+ TTKY
Sbjct: 13 LQLSKLYTLTCAQACFKQDHSQIGGPGFSRVVYCNEPDSPEADSRNYSDNYVRTTKYTLA 72
Query: 68 SYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127
++ PK+LFEQF RVAN YFL+ +L+ TPL+P++ S ++PL V+G +M KE +EDWRR
Sbjct: 73 TFLPKSLFEQFRRVANFYFLVTGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGVEDWRR 132
Query: 128 FMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICY 187
QD EVN RKV VH G+G F K W+ + +GDIVKVEK++FFPADL+ LSSSYED ICY
Sbjct: 133 QKQDNEVNNRKVKVHRGDGSFDAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYEDAICY 192
Query: 188 VETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELY 247
VETMNLDGETNLKVK+ +E TS L ++ FK F VKCE+PN +LY+FVG +E Y
Sbjct: 193 VETMNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKY 252
Query: 248 AIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFA 307
+ P Q+LLRDSKLRNT ++G+VIFTGHD+KV+QN+T PSKRS IEKKMDKII+++F
Sbjct: 253 PLSPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFF 312
Query: 308 ILVLISLISSIGFAVK----INYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILY 363
+++ ++ I S+ F V + + WYL+P + ++F+P + V + H +TA++LY
Sbjct: 313 MVITMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLY 372
Query: 364 GYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKT 423
Y IPISLYVSIEIVK LQ+IFINQDI MY +E+ PA+ARTSNLNEELGQVDTILSDKT
Sbjct: 373 SYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKT 432
Query: 424 GTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIEL 483
GTLTCN M+F+KCSVAGTAYG +EVE+A ++ L Q+ E+ +I++
Sbjct: 433 GTLTCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDEN----------DIDM 482
Query: 484 ETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEE 543
E S + + +KGFNF D R+M+GNW+ E + D + FFR+LA+CHT IPE++E+
Sbjct: 483 EY---SKEAITEESTVKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDED 539
Query: 544 TGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDF 603
T ++YEAESPDEAAF++AARE GFEF+ RTQ+++ +RE G+ VER +K+LN+L+F
Sbjct: 540 TEKISYEAESPDEAAFVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEF 599
Query: 604 TSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLA 663
S RKRMSVIV++EDG++LLLCKGAD+++F+RLSKNGR +EE T +NEY +AGLRTL
Sbjct: 600 NSTRKRMSVIVQEEDGKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLI 659
Query: 664 LAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGV 723
LAY++LDE EY +N +AKSS+ ADRE+ +E V++ +EKDLIL+GATAVEDKLQ GV
Sbjct: 660 LAYRELDEKEYKVFNERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGV 719
Query: 724 PQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT-------ALNSDSVG 776
P CIDKLAQAG+KIWVLTGDKMETAINIGFACSLLRQ MKQI I +L
Sbjct: 720 PDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEK 779
Query: 777 KAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVEC 836
+A K+N+L QI N +K A+ALII+GK+LAYAL+DD+KH FL LAV C
Sbjct: 780 DVIAKASKENVLSQIINGKTQLKY--SGGNAFALIIDGKSLAYALDDDIKHIFLELAVSC 837
Query: 837 ASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVL 896
ASVICCR SPKQKALVTRLVK G GKTTLAIGDGANDVGM+QEADIG+GISGVEGMQ V+
Sbjct: 838 ASVICCRSSPKQKALVTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVM 897
Query: 897 S 897
S
Sbjct: 898 S 898
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SAF5|ALA11_ARATH Putative phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1045 bits (2702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/915 (56%), Positives = 663/915 (72%), Gaps = 39/915 (4%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGSV--QGCPRVIYCNQPHMHKKRPLKYCTNY 58
MT+ R R +L S +Y F + + E + G RV+YCN+P+ Y NY
Sbjct: 1 MTKCR-RRRLHLSNIYAFKGRKSNFQEDHSHIGGPGFSRVVYCNEPNSPAAERRNYVGNY 59
Query: 59 ISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMA 118
+ +TKY S+ PK+LFEQF RVAN YFL+ +LS+T LSP+SP+S LLPL V+ SM
Sbjct: 60 VRSTKYTLASFIPKSLFEQFRRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMV 119
Query: 119 KEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLS 178
KEA+EDW R QD E+N RKV VH GNG+F + W ++VG+IV+VEKD+FFPADLL LS
Sbjct: 120 KEAIEDWGRKKQDIEMNNRKVKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLS 179
Query: 179 SSYEDGICYVETMNLDGETNLKVKRAMEATS-PLNEDEAFKEFTGTVKCENPNPSLYTFV 237
SSYED ICYVETMNLDGETNLKVK+ +EATS L+ED FKE VKCE+PN LYTFV
Sbjct: 180 SSYEDSICYVETMNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFV 239
Query: 238 GNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKK 297
G + ++ + + +Q+LLRDSKLRNT ++YG V+FTGHD+KV+QN+T PSKRS IE+K
Sbjct: 240 GTLHFEEQRLPLSITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERK 299
Query: 298 MDKIIFILFAILVLISLISSIGFAVKI------NYQTPQWWYLKPKETDVYFNPGKPLVP 351
MDKII+++F ++ L+S I SI F ++ N + WYL+P D++F+P + +
Sbjct: 300 MDKIIYLMFGVVFLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMA 359
Query: 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEE 411
+ H TA++LY Y IPISLYVSIEIVK LQ++FIN DI MY +E+ PA ARTSNLNEE
Sbjct: 360 AVYHFFTAVMLYSYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEE 419
Query: 412 LGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESAN 471
LG VDTILSDKTGTLTCN M+F+KCS+AGTAYG +EVE + MA+
Sbjct: 420 LGMVDTILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVE----RSMAM----------- 464
Query: 472 AKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILA 531
+ S + V+ G +IKGFNF D R+M GNW+K+ + L FFR+LA
Sbjct: 465 -RSNGSSLVGDDLDVVVDQSGP----KIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLA 519
Query: 532 ICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPV 591
+CHTAIPE +E TG+++YEAESPDEAAF+VAAREFGFEF+ RTQ+ + RE G+ V
Sbjct: 520 VCHTAIPETDEATGSVSYEAESPDEAAFVVAAREFGFEFFSRTQNGISFRELDLASGKTV 579
Query: 592 EREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLL 651
ER +++LN+L+F S RKRMSVIVRDEDG++LLL KGAD+++F+RL+KNGR +EE T + +
Sbjct: 580 ERVYRLLNVLEFNSARKRMSVIVRDEDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHV 639
Query: 652 NEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVG 711
NEY +AGLRTL LAY+++DE+EY ++ F +AK+S+ ADRE+ ++ +++ ME+DLIL+G
Sbjct: 640 NEYADAGLRTLILAYREVDENEYIEFSKNFNEAKNSVTADRESLIDEITEQMERDLILLG 699
Query: 712 ATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT--- 768
ATAVEDKLQ GVP CIDKLAQAG+KIWVLTGDKMETAINIGFACSLLRQ MKQI I
Sbjct: 700 ATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQEMKQIIINLET 759
Query: 769 ----ALNSDSVGKAAKEAVKDNILMQITNASQMIK--LERDPHAAYALIIEGKTLAYALE 822
AL A + A +++++ Q+ ++ H A+ALII+GK+L YALE
Sbjct: 760 PHIKALEKAGEKDAIEHASRESVVNQMEEGKALLTASSSASSHEAFALIIDGKSLTYALE 819
Query: 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADI 882
DD K FL LA CASVICCR SPKQKALVTRLVK GTGKTTLAIGDGANDVGM+QEADI
Sbjct: 820 DDFKKKFLDLATGCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADI 879
Query: 883 GIGISGVEGMQIVLS 897
G+GISGVEGMQ V+S
Sbjct: 880 GVGISGVEGMQAVMS 894
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P57792|ALA12_ARATH Putative phospholipid-transporting ATPase 12 OS=Arabidopsis thaliana GN=ALA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/907 (55%), Positives = 670/907 (73%), Gaps = 34/907 (3%)
Query: 5 RIRAKLRRSQLYTF----ACLRPHVNETEGSVQGCPRVIYCNQPHMHKKRPLKYCTNYIS 60
R + K++ S+L+T AC +P + ++ G RV++CNQP + YC NY+
Sbjct: 8 RRKRKIQLSKLFTLTGAKACFKP--DHSKIGRSGFSRVVFCNQPDSPEAESRNYCDNYVR 65
Query: 61 TTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKE 120
TTKY ++ PK+LFEQF RVAN YFL+ +LS TPL+P++ VS ++PL V+ +M KE
Sbjct: 66 TTKYTLATFLPKSLFEQFRRVANFYFLVVGILSFTPLAPYTAVSAIVPLTFVILATMFKE 125
Query: 121 ALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSS 180
+EDWRR QD EVN RKV VH GNG F + W+ ++VGDI+KVEK++FFPADL+ LSSS
Sbjct: 126 GVEDWRRKQQDIEVNNRKVRVHRGNGNFDLREWKTLRVGDILKVEKNEFFPADLVLLSSS 185
Query: 181 YEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNI 240
YED +CYVETMNLDGETNLK+K+ +E T L E+ F++F +KCE+PN +LY+FVG +
Sbjct: 186 YEDAVCYVETMNLDGETNLKLKQGLEVTLSLREELNFRDFEAFIKCEDPNANLYSFVGTM 245
Query: 241 EYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDK 300
+ E Y + P Q+LLR SKLRNT ++YG VIFTG D+KV+QN+T PSKRS IE+KMDK
Sbjct: 246 DLKGEKYPLSPQQLLLRGSKLRNTDYIYGVVIFTGPDTKVVQNSTDPPSKRSMIERKMDK 305
Query: 301 IIFILFAILVLISLISSIGFAV--KINYQTP--QWWYLKPKETDVYFNPGKPLVPGLAHL 356
II+++F ++ ++ S+ F + + ++Q + WYLKP ++ ++F+P + + + H
Sbjct: 306 IIYLMFLMVFSLAFFGSVLFGIWTRDDFQNGVMERWYLKPDDSSIFFDPKRAPMAAIYHF 365
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TAL+L Y IPISLYVSIEIVK LQ+IFINQDI MY +E+ PA ARTSNLNEELGQV
Sbjct: 366 LTALMLNSYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVG 425
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476
TILSDKTGTLTCN M+F+KCS+AGTAYG +EVE+A K+ + SA N
Sbjct: 426 TILSDKTGTLTCNSMEFIKCSIAGTAYGRGVTEVEMAMDKR---------KGSALVNQSN 476
Query: 477 SGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTA 536
S + D + +KGFNF D R+MDGNW+ E + D + FF++LA+CHT
Sbjct: 477 GNS---------TEDAVAAEPAVKGFNFRDERIMDGNWVTETHADVIQKFFQLLAVCHTV 527
Query: 537 IPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFK 596
IPE++E+TG ++YEAESPDEAAF++AARE GFEF+ RTQ+++ +RE G+ VER +
Sbjct: 528 IPEVDEDTGKISYEAESPDEAAFVIAARELGFEFFTRTQTTISVRELDLVTGERVERLYS 587
Query: 597 ILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGE 656
+LN+L+F+S +KRMSVIV+D+DG++LLLCKGADS++F+RLS++GR YE+ T +NEY +
Sbjct: 588 VLNVLEFSSSKKRMSVIVQDQDGKLLLLCKGADSVMFERLSESGRKYEKETRDHVNEYAD 647
Query: 657 AGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVE 716
AGLRTL LAY++LDE+EY + +AK+S+ ADREA ++ V++ +EK+L+L+GATAVE
Sbjct: 648 AGLRTLILAYRELDENEYEVFTERISEAKNSVSADREALIDEVTEKIEKNLVLLGATAVE 707
Query: 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD--- 773
DKLQ GVP CI+KLAQAG+KIWVLTGDKMETAINIGFACSLLR+ MKQI I +
Sbjct: 708 DKLQNGVPDCINKLAQAGIKIWVLTGDKMETAINIGFACSLLRRDMKQIIINLETPEIQQ 767
Query: 774 ---SVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFL 830
S K A A+K+N+L QIT+ +K A+ALII+GK+LAYALE+DMK FL
Sbjct: 768 LEKSGEKDAIAALKENVLHQITSGKAQLKASGGNAKAFALIIDGKSLAYALEEDMKGIFL 827
Query: 831 GLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVE 890
LA+ CASVICCR SPKQKALVTRLVK G+G+TTLAIGDGANDVGM+QEADIG+GISGVE
Sbjct: 828 ELAIGCASVICCRSSPKQKALVTRLVKTGSGQTTLAIGDGANDVGMLQEADIGVGISGVE 887
Query: 891 GMQIVLS 897
GMQ V+S
Sbjct: 888 GMQAVMS 894
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1010 bits (2611), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/915 (53%), Positives = 659/915 (72%), Gaps = 45/915 (4%)
Query: 4 GRIRAKLRRSQLYTFACLRPHVNETEGSV--QGCPRVIYCNQPHMHKKRPLKYCTNYIST 61
G R ++ S+LY+F C +P E + +G RV++CN P + L Y NY+ST
Sbjct: 3 GERRKGMKFSKLYSFKCFKPFSREDHSQIGSRGYSRVVFCNDPDNPEALQLNYRGNYVST 62
Query: 62 TKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEA 121
TKY ++ PK+LFEQF RVANIYFL+ A +S +PL+P++ S+L PL IV+G +M KE
Sbjct: 63 TKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYTAPSVLAPLLIVIGATMVKEG 122
Query: 122 LEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSY 181
+ED RR QD E N RKV V G F W+ ++VGD+VKV KD++FPADLL LSSSY
Sbjct: 123 VEDLRRRKQDVEANNRKVEVLGKTGTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSSY 182
Query: 182 EDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIE 241
EDGICYVETMNLDGETNLK+K A+E TS ++E+ K F G +KCE+PN LY+FVG +
Sbjct: 183 EDGICYVETMNLDGETNLKLKHALEITS---DEESIKNFRGMIKCEDPNEHLYSFVGTLY 239
Query: 242 YDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKI 301
++ + Y + P QILLRDSKL+NT +VYG V+FTGHD+KVMQNAT PSKRS IEKKMD+I
Sbjct: 240 FEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIEKKMDQI 299
Query: 302 IFILFAILVLISLISSIGFAVKINYQTP-----QWWYLKPKETDVYFNPGKPLVPGLAHL 356
I+ILF+IL++I+ S+ F + + WYL+P T V+++P + + H
Sbjct: 300 IYILFSILIVIAFTGSVFFGIATRRDMSDNGKLRRWYLRPDHTTVFYDPRRAVAAAFFHF 359
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TAL+LYGYLIPISLYVSIE+VK LQ+IFINQD MY +E+ PA+ARTSNLNEELGQVD
Sbjct: 360 LTALMLYGYLIPISLYVSIEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQVD 419
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQ--NRESANAKH 474
TILSDKTGTLTCN M+F+KCS+AGTAYG +EVE+A KQ + +E+ + ES + K
Sbjct: 420 TILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVEVALRKQKGLMTQEEVGDNESLSIKE 479
Query: 475 KNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICH 534
+ + +KGFNF D R++DG W+ +PN + + FFR+LAICH
Sbjct: 480 QKA---------------------VKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICH 518
Query: 535 TAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVERE 594
TAIP++N +TG +TYEAESPDEAAF++A+RE GFEF+ R+Q+S+ + E G+ V+R
Sbjct: 519 TAIPDVNSDTGEITYEAESPDEAAFVIASRELGFEFFSRSQTSISLHEIDHMTGEKVDRV 578
Query: 595 FKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEY 654
+++L++L+F+S RKRMSVIVR+ + ++LLL KGADS++F RL+K+GR E T + + +Y
Sbjct: 579 YELLHVLEFSSSRKRMSVIVRNPENRLLLLSKGADSVMFKRLAKHGRQNERETKEHIKKY 638
Query: 655 GEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATA 714
EAGLRTL + Y+++DE EY W EF AK+ + DR+A ++ +D +EKDLIL+G+TA
Sbjct: 639 AEAGLRTLVITYREIDEDEYIVWEEEFLNAKTLVTEDRDALIDAAADKIEKDLILLGSTA 698
Query: 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD- 773
VEDKLQKGVP CI+KL+QAG+KIWVLTGDK ETAINIG+ACSLLR+GMKQI +T +SD
Sbjct: 699 VEDKLQKGVPDCIEKLSQAGVKIWVLTGDKTETAINIGYACSLLREGMKQILVTLDSSDI 758
Query: 774 ----------SVGKAAKEAVKDNILMQITNASQMI-KLERDPHAAYALIIEGKTLAYALE 822
+V KA+ +++K + ++ + + ++ + L+I+GK+L YAL+
Sbjct: 759 EALEKQGDKEAVAKASFQSIKKQLREGMSQTAAVTDNSAKENSEMFGLVIDGKSLTYALD 818
Query: 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADI 882
++ FL LA+ C SVICCR SPKQKALVTRLVK GTG+TTLAIGDGANDVGM+QEADI
Sbjct: 819 SKLEKEFLELAIRCNSVICCRSSPKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQEADI 878
Query: 883 GIGISGVEGMQIVLS 897
G+GISG EGMQ V++
Sbjct: 879 GVGISGAEGMQAVMA 893
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/875 (47%), Positives = 579/875 (66%), Gaps = 51/875 (5%)
Query: 37 RVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP 96
R +YCN +P+++ N ISTTKYN F++ PK LFEQF R+ANIYFL + LS+TP
Sbjct: 36 RTVYCND--RESNQPVRFKGNSISTTKYNVFTFLPKGLFEQFRRIANIYFLGISCLSMTP 93
Query: 97 LSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKI 156
+SP SP++ + PL++V+ VS+ KEA EDW+RF D +N V + + + + PW K+
Sbjct: 94 ISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSINNSTVEI-LQDQQWVSIPWRKL 152
Query: 157 QVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEA 216
QVGDIVK++KD FFPAD+LF+SS+ DGICYVET NLDGETNLK+++A+E T E
Sbjct: 153 QVGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDGETNLKIRKALERTWDYLVPEK 212
Query: 217 FKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGH 276
EF G ++CE PN SLYTF GN+ ++ + P Q+LLR LRNT ++ G+V+FTGH
Sbjct: 213 AYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLLLRGCSLRNTEYIVGAVVFTGH 272
Query: 277 DSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKP 336
++KVM NA +PSKRS +EKK+DK+I +F +LV + LI +IG ++ + + YL
Sbjct: 273 ETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIGCSIVTDREDK---YLGL 329
Query: 337 KETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAI-FINQDISMYDD 395
+D + G L+ G T + L+ +IPISLYVSIE++KF+Q+ FIN+D++MY
Sbjct: 330 HNSDWEYRNG--LMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQFINRDLNMYHA 387
Query: 396 ESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAA 455
E+ PA ARTSNLNEELGQV+ I SDKTGTLT N M+F KCS+ G +YG +E+E A
Sbjct: 388 ETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEIEKGIA 447
Query: 456 KQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWL 515
++ + ++E+ R + + KGFNF+D RLM G W
Sbjct: 448 QRHGLKVQEEQRSTGAIRE-------------------------KGFNFDDPRLMRGAWR 482
Query: 516 KEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQ 575
EPN D FR LAICHT +PE +E + Y+A SPDEAA + AA+ FGF FYRRT
Sbjct: 483 NEPNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTP 542
Query: 576 SSVFIRERYPPK-GQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFD 634
+ V++RE + K G+ + ++ILN+L+F S RKR SV+ R DG+++L CKGAD++IF+
Sbjct: 543 TMVYVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFE 602
Query: 635 RLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREA 694
RL+ + T + L +G +GLRTL LAYK L+ Y +WN +F +AKS++ DRE
Sbjct: 603 RLANGMDDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSAL-RDREK 661
Query: 695 TLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754
L+ V++++EKDLIL+G+TA+EDKLQ+GVP CI+ L++AG+KIWVLTGDKMETAINI +A
Sbjct: 662 KLDEVAELIEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYA 721
Query: 755 CSLLRQGMKQICITALNSDSVGKAA------------KEAVKDNILMQITNASQMIKLER 802
C+L+ MKQ I++ +D++ +A KE VK + + A +
Sbjct: 722 CNLINNEMKQFVISS-ETDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVA 780
Query: 803 DPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGK 862
P +L+I+GK L YAL+ ++ L L++ C SV+CCRVSP QKA VT LV++G K
Sbjct: 781 GPK--LSLVIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQK 838
Query: 863 TTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLS 897
TL+IGDGANDV MIQ A +GIGISG+EGMQ V++
Sbjct: 839 ITLSIGDGANDVSMIQAAHVGIGISGMEGMQAVMA 873
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 928 | ||||||
| 255560731 | 1231 | Phospholipid-transporting ATPase, putati | 0.966 | 0.728 | 0.767 | 0.0 | |
| 359482803 | 1229 | PREDICTED: putative phospholipid-transpo | 0.965 | 0.729 | 0.759 | 0.0 | |
| 224134621 | 1227 | aminophospholipid ATPase [Populus tricho | 0.966 | 0.731 | 0.768 | 0.0 | |
| 357454575 | 1224 | Aminophospholipid ATPase [Medicago trunc | 0.962 | 0.729 | 0.742 | 0.0 | |
| 356522182 | 1224 | PREDICTED: putative phospholipid-transpo | 0.966 | 0.732 | 0.740 | 0.0 | |
| 224128678 | 1201 | aminophospholipid ATPase [Populus tricho | 0.946 | 0.731 | 0.775 | 0.0 | |
| 307136290 | 1096 | phospholipid-transporting ATPase [Cucumi | 0.952 | 0.806 | 0.760 | 0.0 | |
| 449447866 | 1237 | PREDICTED: putative phospholipid-transpo | 0.952 | 0.714 | 0.757 | 0.0 | |
| 356550414 | 1224 | PREDICTED: putative phospholipid-transpo | 0.952 | 0.722 | 0.751 | 0.0 | |
| 356525995 | 1224 | PREDICTED: putative phospholipid-transpo | 0.966 | 0.732 | 0.743 | 0.0 |
| >gi|255560731|ref|XP_002521379.1| Phospholipid-transporting ATPase, putative [Ricinus communis] gi|223539457|gb|EEF41047.1| Phospholipid-transporting ATPase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1444 bits (3738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 700/912 (76%), Positives = 796/912 (87%), Gaps = 15/912 (1%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEG----SVQGCPRVIYCNQPHMHKKRPLKYCT 56
MTRGRIRA+LRRS L+ F+C+RP E G R+++CNQP MH+K+PLKYC+
Sbjct: 1 MTRGRIRARLRRSHLHPFSCMRPRTEHDEAPHPIEGPGYSRMVHCNQPSMHRKKPLKYCS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
NYISTTKYN ++ PKALFEQF RVANIYFL+AA+LS+TP++PFS VSM+ PLA VVG+S
Sbjct: 61 NYISTTKYNVVTFLPKALFEQFRRVANIYFLLAAILSLTPVAPFSAVSMIFPLAFVVGIS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
MAKEALEDWRRFMQD +VN RK SVH G+GVF YKPW+KIQVGD+VKVEKDQFFPADLL
Sbjct: 121 MAKEALEDWRRFMQDMKVNTRKASVHTGDGVFQYKPWQKIQVGDVVKVEKDQFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LSSSYEDGICYVETMNLDGETNLK KRA+E T L +DEAFK FTGTVKCE+PNPSLYTF
Sbjct: 181 LSSSYEDGICYVETMNLDGETNLKPKRALEVTLSLEDDEAFKNFTGTVKCEDPNPSLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
+GNIEY+R++Y +DPSQILLRDSKLRNTA VYG VIFTG DSKVMQN+T SPSKRS IE+
Sbjct: 241 IGNIEYERQVYPLDPSQILLRDSKLRNTAFVYGVVIFTGFDSKVMQNSTKSPSKRSRIER 300
Query: 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
KMDKII+ILF+IL+LIS++SSIGFAVKI Q P WWY++P + + ++P P+ GLAHL
Sbjct: 301 KMDKIIYILFSILLLISMMSSIGFAVKIKLQMPDWWYMQPSKPENLYDPDSPVKSGLAHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TALILYGYLIPISLYVSIE+VK QA FI++D+ MYD+E+G AQARTSNLNEELGQVD
Sbjct: 361 ITALILYGYLIPISLYVSIEVVKVCQAKFIDEDLHMYDEETGNTAQARTSNLNEELGQVD 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476
TILSDKTGTLTCNQMDFLKCS+AGTAYGV SEVELAAAKQ+A+DLEEQ+ E +N N
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVELAAAKQIAMDLEEQDDELSNGSRPN 480
Query: 477 SGS-----------EIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLL 525
S + EIELETVITS D D K +KGF+FEDSRLMDGNWLKEPN D +LL
Sbjct: 481 SHTHNSWETRSGAPEIELETVITSKDERDQKPVLKGFSFEDSRLMDGNWLKEPNADVILL 540
Query: 526 FFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYP 585
FFRILAIC +A+PELNEETG+ TYEAESPDE AFLVAAREFGFEF +RTQSSVFI E+Y
Sbjct: 541 FFRILAICQSAVPELNEETGSFTYEAESPDEGAFLVAAREFGFEFCKRTQSSVFICEKYA 600
Query: 586 PKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEE 645
GQ VEREFK+LNLL+FTSKRKRMSVIVR+EDGQILL CKGADSIIFDRLSK+GRMYEE
Sbjct: 601 HPGQSVEREFKVLNLLEFTSKRKRMSVIVRNEDGQILLFCKGADSIIFDRLSKSGRMYEE 660
Query: 646 ATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEK 705
TT+ LNEYGEAGLRTLALAYK+LDESEY+AWN+EF KAK+SIGADR+ LE V+DMME+
Sbjct: 661 TTTRHLNEYGEAGLRTLALAYKKLDESEYTAWNNEFMKAKTSIGADRDTMLERVADMMER 720
Query: 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQI 765
+LILVG+TAVEDKLQKGVPQCIDKLAQAGLK+WVLTGDKMETAINIG+ACSLLRQGMKQI
Sbjct: 721 ELILVGSTAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYACSLLRQGMKQI 780
Query: 766 CITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDM 825
CIT NSD + + +K+AV++NI QITNASQMIKLE+DPHAA+ALII+GKTL YALEDDM
Sbjct: 781 CITVTNSDMIAQDSKQAVRENIQNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDM 840
Query: 826 KHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIG 885
KH FL LAV+CASVICCRVSPKQKALVTRLVKEGTG+TTLAIGDGANDVGMIQEADIG+G
Sbjct: 841 KHQFLALAVDCASVICCRVSPKQKALVTRLVKEGTGRTTLAIGDGANDVGMIQEADIGVG 900
Query: 886 ISGVEGMQIVLS 897
ISGVEGMQ V++
Sbjct: 901 ISGVEGMQAVMA 912
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359482803|ref|XP_003632843.1| PREDICTED: putative phospholipid-transporting ATPase 4-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1442 bits (3733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/914 (75%), Positives = 781/914 (85%), Gaps = 18/914 (1%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGSVQ----GCPRVIYCNQPHMHKKRPLKYCT 56
MTRGRIRAKLR+S LYTF C R + E G R++YCNQP +H K+PL Y +
Sbjct: 1 MTRGRIRAKLRQSHLYTFTCFRQGTADAEAPHSFDGPGFSRIVYCNQPQVHSKKPLYYTS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
N ISTTKYN ++ PKA+FEQF RVAN+YFL+AA+LS+TP++PFS VSM+ PLA VVG+S
Sbjct: 61 NNISTTKYNIITFLPKAIFEQFRRVANLYFLLAAILSLTPVAPFSAVSMIAPLAFVVGLS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
MAKEALEDWRRF+QD +VN RK S+H GNGVF +KPW++I+VGD+VKVEKDQFFPADLL
Sbjct: 121 MAKEALEDWRRFIQDMKVNTRKASIHKGNGVFGFKPWQRIRVGDVVKVEKDQFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LSSSY+DGICYVETMNLDGETNLKVKR++E T PL++D F +F T+KCE+PNPSLYTF
Sbjct: 181 LSSSYDDGICYVETMNLDGETNLKVKRSLEVTLPLDDDGTFNDFRATIKCEDPNPSLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
VGN EY+R++Y +DPSQILLRDSKLRNTA VYG VIFTGHDSKVMQNAT SPSKRS IE+
Sbjct: 241 VGNFEYERQVYPLDPSQILLRDSKLRNTAFVYGVVIFTGHDSKVMQNATQSPSKRSRIER 300
Query: 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
KMD+II+ILF +LV+ISLISSIGFAVK YQ P WWYL+P T +NP KP + G+ HL
Sbjct: 301 KMDQIIYILFTLLVVISLISSIGFAVKTKYQMPDWWYLQPNNTTNLYNPKKPALSGIFHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
VTALILYGYLIPISLYVSIE+VK LQA FINQDI MYD+E+G AQARTSNLNEELGQVD
Sbjct: 361 VTALILYGYLIPISLYVSIEVVKVLQATFINQDIHMYDEETGNTAQARTSNLNEELGQVD 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESAN-AKHK 475
TILSDKTGTLTCNQMDFLKCS+AG+AYG SEVELAAAKQMAIDLEEQ E +N HK
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGSAYGSGSSEVELAAAKQMAIDLEEQGNELSNFPMHK 480
Query: 476 NS------------GSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTL 523
NS +EIELETV+TS D + K IKGF+FED RLM GNW KEPN D +
Sbjct: 481 NSTGDSWNNASGLEATEIELETVVTSKDEKEHKHVIKGFSFEDIRLMGGNWSKEPNADVI 540
Query: 524 LLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRER 583
LF RILA+CHTAIPE NEE G YEAESPDE +FLVAAREFGFEF +RT +SV +RER
Sbjct: 541 ELFLRILAVCHTAIPERNEEIGGFNYEAESPDEGSFLVAAREFGFEFCKRTHTSVHVRER 600
Query: 584 YPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMY 643
Y GQPVERE++ILNLL+FTSKRKRMSVIVRDEDGQI LLCKGADSIIFDRL+KNGRMY
Sbjct: 601 YVSSGQPVEREYQILNLLEFTSKRKRMSVIVRDEDGQIFLLCKGADSIIFDRLAKNGRMY 660
Query: 644 EEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMM 703
EEATT+ LNEYGE+GLRTLALAYK+L+ESEYSAWNSEF KAK+SIG DR+A LE VSD M
Sbjct: 661 EEATTRHLNEYGESGLRTLALAYKKLEESEYSAWNSEFMKAKTSIGPDRDAMLERVSDAM 720
Query: 704 EKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMK 763
E++LILVGATAVEDKLQKGVPQCIDKLAQAGLK+WVLTGDKMETAINIGFACSLLRQGMK
Sbjct: 721 ERELILVGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMK 780
Query: 764 QICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALED 823
QICIT +N D + KEAVK+NILMQITNASQMIKLE+DPHAA+ALII+GKTL +AL D
Sbjct: 781 QICIT-VNPDVQTQDGKEAVKENILMQITNASQMIKLEKDPHAAFALIIDGKTLEHALAD 839
Query: 824 DMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG 883
DMKH FLGLAV+CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG
Sbjct: 840 DMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG 899
Query: 884 IGISGVEGMQIVLS 897
+GISGVEGMQ V++
Sbjct: 900 VGISGVEGMQAVMA 913
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134621|ref|XP_002327449.1| aminophospholipid ATPase [Populus trichocarpa] gi|222836003|gb|EEE74424.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1410 bits (3650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 699/910 (76%), Positives = 799/910 (87%), Gaps = 13/910 (1%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGSVQ----GCPRVIYCNQPHMHKKRPLKYCT 56
MTRGRIRA+LRRS L+ F+CLRP+ N +EG G R+++CNQPH H+K+PLKYC+
Sbjct: 1 MTRGRIRARLRRSHLHPFSCLRPNANNSEGPHPLLGPGFSRIVHCNQPHKHQKKPLKYCS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
NYISTTKYN ++ PKAL+EQF+R+AN+YFL+AA+LS+T ++PFSP+SM+LPLA VVG+S
Sbjct: 61 NYISTTKYNIVTFLPKALYEQFHRLANLYFLVAAVLSLTAVAPFSPLSMILPLAFVVGLS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
MAKEALEDWRRF QD +VN+RK SVH G GVF YKPW+KIQVGD+VKVEKDQFFPADLL
Sbjct: 121 MAKEALEDWRRFTQDMKVNSRKASVHKGGGVFGYKPWQKIQVGDVVKVEKDQFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LS+SY+DGICYVETMNLDGETNLKVKR++E T PL +DE+FK FTG +KCE+PNP+LYTF
Sbjct: 181 LSTSYDDGICYVETMNLDGETNLKVKRSLEVTLPLEDDESFKNFTGIIKCEDPNPNLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
VGN EY+R++Y +DP+QILLRDSKLRNT++VYG VIFTG DSKVMQN+T SPSKRS IEK
Sbjct: 241 VGNFEYERQVYPLDPTQILLRDSKLRNTSYVYGVVIFTGFDSKVMQNSTKSPSKRSKIEK 300
Query: 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
KMDKII+IL ++LVLIS ISSIGFAVKI +Q P W Y++P+ + ++P P G+AHL
Sbjct: 301 KMDKIIYILLSLLVLISSISSIGFAVKIKFQMPDWTYMQPRNENDLYDPDNPGKSGVAHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TALILYGYLIPISLYVSIEIVK QA FINQDI MYD+E+G AQARTSNLNEELGQVD
Sbjct: 361 ITALILYGYLIPISLYVSIEIVKVFQARFINQDIHMYDEETGNTAQARTSNLNEELGQVD 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESAN----- 471
TILSDKTGTLTCNQMDFLKCS+AGTAYGV SE+E+AAAKQMA+DLEEQ+ ++ N
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTAYGVCSSEIEVAAAKQMAMDLEEQDTQNTNVSRYG 480
Query: 472 -AKHK---NSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFF 527
+ HK G EIELE+VITS ND K IKGFNFEDSRLMDG WL E N + LLLFF
Sbjct: 481 KSAHKEDSRGGPEIELESVITSKCDNDQKPAIKGFNFEDSRLMDGKWLNERNREVLLLFF 540
Query: 528 RILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPK 587
RILAIC TA+PELNEETG TYEAESPDEAAFL AAREFGFEFY+RTQSSVFIRE+Y
Sbjct: 541 RILAICQTAVPELNEETGMFTYEAESPDEAAFLAAAREFGFEFYKRTQSSVFIREKYAHP 600
Query: 588 GQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEAT 647
G+ +EREFKILNLL+FTSKRKRMSVIVRDEDGQILLLCKGADS+IFDRLSKNGR+YEE T
Sbjct: 601 GRLIEREFKILNLLEFTSKRKRMSVIVRDEDGQILLLCKGADSVIFDRLSKNGRIYEETT 660
Query: 648 TKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDL 707
K LNEYGEAGLRTLALAYK+LDESEYSAWN+EF K K+SI DREA LE V+DMMEKDL
Sbjct: 661 VKHLNEYGEAGLRTLALAYKKLDESEYSAWNNEFVKVKTSISTDREAMLERVADMMEKDL 720
Query: 708 ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICI 767
ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF+CSLLRQGMK+ICI
Sbjct: 721 ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKRICI 780
Query: 768 TALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKH 827
T +NSD V + +K+AVK+NILMQITN+SQM+KL++DPHAA+ALII+GK+L+YALEDDMKH
Sbjct: 781 TVMNSDVVAQDSKQAVKENILMQITNSSQMVKLQKDPHAAFALIIDGKSLSYALEDDMKH 840
Query: 828 HFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887
HFL LAV CASVICCRVSPKQKALVTRLVKEGT KTTLAIGDGANDVGMIQEADIG+GIS
Sbjct: 841 HFLALAVGCASVICCRVSPKQKALVTRLVKEGTKKTTLAIGDGANDVGMIQEADIGVGIS 900
Query: 888 GVEGMQIVLS 897
GVEGMQ V++
Sbjct: 901 GVEGMQAVMA 910
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357454575|ref|XP_003597568.1| Aminophospholipid ATPase [Medicago truncatula] gi|355486616|gb|AES67819.1| Aminophospholipid ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1405 bits (3637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 673/906 (74%), Positives = 773/906 (85%), Gaps = 13/906 (1%)
Query: 5 RIRAKLRRSQLYTFACLRPH-VNETEGSVQG--CPRVIYCNQPHMHKKRPLKYCTNYIST 61
RIRAKLR S LYTF CLRP+ V+E +QG R +YCNQP +H+K+ L YC N IST
Sbjct: 6 RIRAKLRWSNLYTFGCLRPNTVDEVPHPLQGPGYSRTVYCNQPQIHEKKSLFYCKNNIST 65
Query: 62 TKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEA 121
TKYN +FPKALFEQF RVANIYFL+AA LS++P+SPFSP+SM+ PLA VVG+SMAKEA
Sbjct: 66 TKYNAIMFFPKALFEQFRRVANIYFLLAACLSLSPISPFSPLSMIAPLAFVVGLSMAKEA 125
Query: 122 LEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSY 181
LED RRF+QD +VN RK S H GNGVF K W+KI VGDIVKVEKDQFFPADLL LSSSY
Sbjct: 126 LEDSRRFLQDVKVNRRKASFHKGNGVFGLKSWQKIMVGDIVKVEKDQFFPADLLLLSSSY 185
Query: 182 EDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIE 241
EDGICYVETMNLDGETNLKVKR++EAT L+ D AFK+F+GT++CE+PNP+LYTFVGN E
Sbjct: 186 EDGICYVETMNLDGETNLKVKRSLEATFSLDNDGAFKDFSGTIRCEDPNPNLYTFVGNFE 245
Query: 242 YDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKI 301
Y+R++Y +DP ILLRDSKLRNT +VYG VIFTGHDSKVMQN+T SPSKRS IEKKMD I
Sbjct: 246 YERQVYPLDPGHILLRDSKLRNTEYVYGVVIFTGHDSKVMQNSTKSPSKRSRIEKKMDYI 305
Query: 302 IFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALI 361
I+ LF++L+ IS ISS+GF VK Y+TP+WWYL+P + + F+P K G++HL+TALI
Sbjct: 306 IYTLFSVLIAISFISSVGFVVKTKYETPKWWYLRPDQIEYQFDPKKLGFAGMSHLITALI 365
Query: 362 LYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421
LYGYLIPISLYVSIE+VK LQA FINQD+ MYD+E+G PA+ARTSNLNEELGQVDTILSD
Sbjct: 366 LYGYLIPISLYVSIEVVKVLQATFINQDLHMYDEETGTPAEARTSNLNEELGQVDTILSD 425
Query: 422 KTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGS-- 479
KTGTLTCNQMDFLKCS+AGT+YGV SEVELAAAKQMA DLEE++ + +N + G
Sbjct: 426 KTGTLTCNQMDFLKCSIAGTSYGVRSSEVELAAAKQMATDLEEEDSDLSNFPMQKKGKAP 485
Query: 480 --------EIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILA 531
EIELET++TS DG D + IKGF F+D+RLM+GNW K+PN + +LLFFRILA
Sbjct: 486 WENVGRAEEIELETIVTSKDGEDQRPAIKGFGFDDNRLMNGNWSKDPNAEVILLFFRILA 545
Query: 532 ICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPV 591
+CHTAIPELNEE+ + TYEAESPDE AFLVAAREFGFEFYRRTQSSV +RER GQ V
Sbjct: 546 VCHTAIPELNEESNSCTYEAESPDEGAFLVAAREFGFEFYRRTQSSVVVRERISTSGQVV 605
Query: 592 EREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLL 651
ER++KILNLL+FTSKRKRMSVIVRDE+G I+L CKGADSIIFDRLSKNG+ Y E T++ L
Sbjct: 606 ERDYKILNLLEFTSKRKRMSVIVRDEEGSIILFCKGADSIIFDRLSKNGKKYLETTSRHL 665
Query: 652 NEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVG 711
NEYGE GLRTLALAY++LDE EYS WN+EFQKAK+++G DREA LE VSD ME++LILVG
Sbjct: 666 NEYGEVGLRTLALAYRKLDEQEYSDWNNEFQKAKTAVGPDREAMLEKVSDSMERELILVG 725
Query: 712 ATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALN 771
ATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICI+ N
Sbjct: 726 ATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICISTTN 785
Query: 772 SDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLG 831
S+SV KEA+K NIL QITNASQ++ LE+DPHAA+ALII+GKTL YALEDD+KH FLG
Sbjct: 786 SESVINDGKEAIKSNILTQITNASQLMNLEKDPHAAFALIIDGKTLTYALEDDIKHQFLG 845
Query: 832 LAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEG 891
LAV CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEG
Sbjct: 846 LAVNCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEG 905
Query: 892 MQIVLS 897
MQ V++
Sbjct: 906 MQAVMA 911
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522182|ref|XP_003529726.1| PREDICTED: putative phospholipid-transporting ATPase 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1400 bits (3623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 675/911 (74%), Positives = 767/911 (84%), Gaps = 14/911 (1%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNE-TEGSVQG--CPRVIYCNQPHMHKKRPLKYCTN 57
MTRGRIRAKLRRS LYTF CL+P E +QG R +YCNQP +H KRPL YC N
Sbjct: 1 MTRGRIRAKLRRSHLYTFGCLKPSTTEEAPHPLQGPGFSRTVYCNQPLLHDKRPLLYCKN 60
Query: 58 YISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSM 117
ISTTKYN ++FPKALFEQF RVANIYFL+AA LS +P+SPFSP+SM+ PLA VVG+SM
Sbjct: 61 DISTTKYNVITFFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSM 120
Query: 118 AKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFL 177
AKEALED RRF+QD +VN RKV+ H G+G+F + W+ I VGD+VKV KDQFFPADLL L
Sbjct: 121 AKEALEDSRRFVQDVKVNRRKVNRHKGDGIFGPRSWQNIMVGDVVKVNKDQFFPADLLLL 180
Query: 178 SSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFV 237
SSSYEDGICYVETMNLDGETNLKVKR++EAT L+ DE FK+FTGT++CE+PNP+LYTFV
Sbjct: 181 SSSYEDGICYVETMNLDGETNLKVKRSLEATMTLDNDEVFKDFTGTIQCEDPNPNLYTFV 240
Query: 238 GNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKK 297
GN++Y+ ++Y +DPSQILLRDSKLRNT ++YG IFTGHDSKVMQN+T SPSKRS IEKK
Sbjct: 241 GNLDYECQIYPLDPSQILLRDSKLRNTDYIYGVAIFTGHDSKVMQNSTKSPSKRSTIEKK 300
Query: 298 MDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357
MD II+ LF +L+LIS+ISSIGF K YQ P+WWYL+P + ++P K V G++HL+
Sbjct: 301 MDYIIYTLFTVLILISVISSIGFIFKTKYQAPKWWYLRPDNIEYQYDPNKVGVAGMSHLI 360
Query: 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDT 417
TALILYGYLIPISLYVSIE+VK LQA FINQDI MYD+E+G PA ARTSNLNEELGQVDT
Sbjct: 361 TALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDEETGTPADARTSNLNEELGQVDT 420
Query: 418 ILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNS 477
ILSDKTGTLTCNQMDFLKCS+AGTAYGV SE+E+AAAKQMA D E+Q + +N S
Sbjct: 421 ILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEIEVAAAKQMASDHEDQESDLSNFPMPKS 480
Query: 478 -----------GSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLF 526
EIELETV+TS D K IKGF FED RLM+ NWL+EPN D LL+F
Sbjct: 481 KARISWDNVRKAEEIELETVVTSKGDEDQKHAIKGFGFEDDRLMNCNWLQEPNADDLLMF 540
Query: 527 FRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPP 586
FRILA+CHTAIPELNEETG TYEAESPDE AFLVAAREFGFEF RRTQSS+FI ER+
Sbjct: 541 FRILAVCHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCRRTQSSIFIHERFSA 600
Query: 587 KGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEA 646
+ VERE+K+LNLLDFTSKRKRMSVIVRDE+G + L CKGADSIIFDRLSKNG+ Y EA
Sbjct: 601 SRKVVEREYKLLNLLDFTSKRKRMSVIVRDEEGSLFLFCKGADSIIFDRLSKNGKHYLEA 660
Query: 647 TTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKD 706
TT+ LNEYGEAGLRTLALAY++LDE EY+AWN+EFQKAK+++GADR++ LE VSDMMEK
Sbjct: 661 TTRHLNEYGEAGLRTLALAYRKLDEQEYTAWNNEFQKAKAAVGADRDSMLERVSDMMEKG 720
Query: 707 LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIC 766
LILVGATAVEDKLQKGVPQCID LAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIC
Sbjct: 721 LILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIC 780
Query: 767 ITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMK 826
IT SDSV K+ +KDNIL QITN SQMIKLE+DPHAA+ALII+GKTL YALEDDMK
Sbjct: 781 ITTPVSDSVATDVKQGIKDNILNQITNGSQMIKLEKDPHAAFALIIDGKTLTYALEDDMK 840
Query: 827 HHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI 886
FLGLAV+CASVICCRVSPKQKALVTRLVK+G+GKTTLAIGDGANDVGMIQEADIG+GI
Sbjct: 841 LLFLGLAVDCASVICCRVSPKQKALVTRLVKQGSGKTTLAIGDGANDVGMIQEADIGVGI 900
Query: 887 SGVEGMQIVLS 897
SGVEGMQ V++
Sbjct: 901 SGVEGMQAVMA 911
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224128678|ref|XP_002329063.1| aminophospholipid ATPase [Populus trichocarpa] gi|222839734|gb|EEE78057.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1398 bits (3618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/894 (77%), Positives = 779/894 (87%), Gaps = 16/894 (1%)
Query: 20 CLRPHVNETEG----SVQGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALF 75
CLRP+ N EG S G R+++CN+P H K+PLKYC+NYISTTKYN ++ PKALF
Sbjct: 1 CLRPNANNNEGPHPLSGPGFSRIVHCNRPDRHLKKPLKYCSNYISTTKYNIVTFLPKALF 60
Query: 76 EQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVN 135
EQF+RVAN YFL+AA LS+T ++PFSPVSM+ PLA VVG+SM KEALEDW RF QD +VN
Sbjct: 61 EQFHRVANFYFLVAAGLSLTAVAPFSPVSMIAPLAFVVGISMLKEALEDWHRFAQDMKVN 120
Query: 136 ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDG 195
+RK SVH G+GVF YKPW+KIQVGD+VKVEKDQFFPADLL LS+SY+DG+ YVETMNLDG
Sbjct: 121 SRKASVHKGDGVFGYKPWQKIQVGDVVKVEKDQFFPADLLLLSASYDDGVSYVETMNLDG 180
Query: 196 ETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQIL 255
ETNLKVKR++E T PL +DEAFK FTG +KCE+PNPSLYTF+GN EY+R++Y +DPSQIL
Sbjct: 181 ETNLKVKRSLEVTLPLEDDEAFKNFTGIIKCEDPNPSLYTFIGNFEYERQVYPLDPSQIL 240
Query: 256 LRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLI 315
LRDSKLRNTA+VYG VIFTG DSKVMQN+T SPSKRS IEKKMDKII+IL ++L+LIS I
Sbjct: 241 LRDSKLRNTAYVYGVVIFTGFDSKVMQNSTKSPSKRSKIEKKMDKIIYILLSLLLLISSI 300
Query: 316 SSIGFAVKINYQTPQWWYL-KPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVS 374
SSIGFAVKI Q P WWY+ K + D +NP +P GLAHLVTALILYGYLIPISLYVS
Sbjct: 301 SSIGFAVKIKLQMPDWWYMPKNPDNDSLYNPDQPSKSGLAHLVTALILYGYLIPISLYVS 360
Query: 375 IEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL 434
IEIVK QA FINQDI MYD+ESG AQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL
Sbjct: 361 IEIVKVFQARFINQDIQMYDEESGNTAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL 420
Query: 435 KCSVAGTAYGVSPSEVELAAAKQMAIDLEEQN---------RESANAKHKNS--GSEIEL 483
KCS+AGTAYGV SEVELAAAKQMA+DLEEQ+ R+SA+ ++S G EIEL
Sbjct: 421 KCSIAGTAYGVRSSEVELAAAKQMAMDLEEQDTQITNGSRYRKSAHNSWEDSRGGPEIEL 480
Query: 484 ETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEE 543
E+VITS ND K IKGF+FED++LM+GNWLKEPN + +LLFFRILAIC TA+PELNEE
Sbjct: 481 ESVITSKGENDQKPAIKGFSFEDNKLMNGNWLKEPNTEVILLFFRILAICQTAVPELNEE 540
Query: 544 TGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDF 603
TG TYEAESPDEAAFL AAREFGFEF +RTQSSVFIRE+Y GQ +EREFKILNLL+F
Sbjct: 541 TGMFTYEAESPDEAAFLAAAREFGFEFCKRTQSSVFIREKYAHPGQLIEREFKILNLLEF 600
Query: 604 TSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLA 663
TS+RKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYE T K LN+YGE GLRTLA
Sbjct: 601 TSQRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYETTTAKHLNDYGEVGLRTLA 660
Query: 664 LAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGV 723
LAYK+LDESEYSAWN+EF KAK+SI ADR+A LE V+DMMEKDLILVGATAVEDKLQKGV
Sbjct: 661 LAYKKLDESEYSAWNNEFVKAKTSISADRDAMLERVADMMEKDLILVGATAVEDKLQKGV 720
Query: 724 PQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAV 783
PQCIDKLAQAGLKIWVLTGDKMETAINIGF+CSLLRQGMKQI IT +NSD+V + +K+AV
Sbjct: 721 PQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQIFITVMNSDAVAQESKQAV 780
Query: 784 KDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR 843
K+NILMQITNASQM+KLE+DPHAA+ALII+GKTL+YALEDDMKH FL LAV CASVICCR
Sbjct: 781 KENILMQITNASQMVKLEKDPHAAFALIIDGKTLSYALEDDMKHQFLALAVVCASVICCR 840
Query: 844 VSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLS 897
VSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEGMQ V++
Sbjct: 841 VSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMA 894
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|307136290|gb|ADN34117.1| phospholipid-transporting ATPase [Cucumis melo subsp. melo] | Back alignment and taxonomy information |
|---|
Score = 1395 bits (3610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/903 (76%), Positives = 772/903 (85%), Gaps = 19/903 (2%)
Query: 13 SQLYTFACLRP-HVNETEGSVQ----GCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFF 67
S LYTFACLR E + S G R++ CNQP H+++PLKYC+NYISTTKYN
Sbjct: 18 SHLYTFACLRADSAREVDDSNPLTGPGFSRIVCCNQPQTHERKPLKYCSNYISTTKYNVL 77
Query: 68 SYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127
S+ PKALFEQF RVAN+YFL+AALLS+TP++PFS VSM+ PL VVG+SMAKEALEDWRR
Sbjct: 78 SFVPKALFEQFRRVANLYFLLAALLSLTPVAPFSAVSMIAPLVFVVGLSMAKEALEDWRR 137
Query: 128 FMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICY 187
F+QD +VN RKVSVH G GVF Y+PW KI+VGDIVKVEKDQFFPADLL LSS YEDGICY
Sbjct: 138 FVQDMKVNLRKVSVHKGEGVFGYRPWHKIRVGDIVKVEKDQFFPADLLLLSSCYEDGICY 197
Query: 188 VETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELY 247
VETMNLDGETNLKVKRA+E T PL++D FK+F+G + CE+PNP+LYTFVGN EYDR++Y
Sbjct: 198 VETMNLDGETNLKVKRALEVTLPLDDDATFKDFSGKIYCEDPNPNLYTFVGNFEYDRQIY 257
Query: 248 AIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFA 307
+DP+QILLRDSKLRNTA+ YG VIFTGHDSKVMQNAT SPSKRS IE+KMDKII+ILF
Sbjct: 258 PLDPNQILLRDSKLRNTAYAYGVVIFTGHDSKVMQNATKSPSKRSRIERKMDKIIYILFT 317
Query: 308 ILVLISLISSIGFAVKINYQTPQWWYLKPK--ETDVYFNPGKPLVPGLAHLVTALILYGY 365
+L+LIS ISSIGFAVK YQ WWYL+ + D +NP KP + GL HL+TALILYGY
Sbjct: 318 LLILISSISSIGFAVKTKYQMTDWWYLRTTGDDHDPLYNPRKPTLSGLIHLITALILYGY 377
Query: 366 LIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGT 425
LIPISLYVSIE+VK LQA FINQDI+MY +E+ PA+ARTSNLNEELGQVDTILSDKTGT
Sbjct: 378 LIPISLYVSIEVVKVLQASFINQDINMYCEETANPARARTSNLNEELGQVDTILSDKTGT 437
Query: 426 LTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQ-----------NRESANAKH 474
LTCNQMDFLKCS+AGTAYGV SEVELAAA+QMA D EEQ N + + H
Sbjct: 438 LTCNQMDFLKCSIAGTAYGVKSSEVELAAARQMAYDFEEQDGEYPDVHGQKNSQQPSMPH 497
Query: 475 KNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICH 534
GSEIELETV+TS DG D K IK F+FEDSRL GNWL EPN D LLLFFRILAICH
Sbjct: 498 SRLGSEIELETVVTSTDGKDQKPAIKYFSFEDSRLTGGNWLNEPNHDVLLLFFRILAICH 557
Query: 535 TAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVERE 594
TAIPELNEETG TYEAESPDE AFLVAAREFGFEF +RTQS++ +RERYP Q VERE
Sbjct: 558 TAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCKRTQSTLVVRERYPSPDQVVERE 617
Query: 595 FKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEY 654
+KILNLLDFTSKRKRMSVIV+DE+GQILLLCKGADSIIFDRLSKNGRMYEEATT+ LNEY
Sbjct: 618 YKILNLLDFTSKRKRMSVIVKDEEGQILLLCKGADSIIFDRLSKNGRMYEEATTRHLNEY 677
Query: 655 GEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATA 714
GEAGLRTLALAY++L+E+EY+AWN+EFQKAK+SIG DR+A LE VSD+ME++L+LVGATA
Sbjct: 678 GEAGLRTLALAYRKLEEAEYNAWNNEFQKAKTSIGGDRDAMLERVSDLMERELVLVGATA 737
Query: 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDS 774
VEDKLQ GVPQCIDKLAQAGLKIWVLTGDKMETAINIG+ACSLLRQGMK+ICI+ SDS
Sbjct: 738 VEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKRICIST-TSDS 796
Query: 775 VGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAV 834
+ + KEA+K+NI QITNASQMIKLE DPHAA+ALII+GKTL YALEDDMK FLGLAV
Sbjct: 797 LAQDGKEAMKENISNQITNASQMIKLENDPHAAFALIIDGKTLTYALEDDMKLQFLGLAV 856
Query: 835 ECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQI 894
+CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEGMQ
Sbjct: 857 DCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQA 916
Query: 895 VLS 897
V++
Sbjct: 917 VMA 919
|
Source: Cucumis melo subsp. melo Species: Cucumis melo Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449447866|ref|XP_004141687.1| PREDICTED: putative phospholipid-transporting ATPase 4-like [Cucumis sativus] gi|449480563|ref|XP_004155931.1| PREDICTED: putative phospholipid-transporting ATPase 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1389 bits (3595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 685/904 (75%), Positives = 773/904 (85%), Gaps = 20/904 (2%)
Query: 13 SQLYTFA-CLRP-HVNETEGSVQ----GCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNF 66
S LYTFA CLR E + S G RV+ CNQP H+++PLKYCTNYISTTKYN
Sbjct: 18 SHLYTFAACLRADSAREVDDSNPLTGPGFSRVVCCNQPQTHERKPLKYCTNYISTTKYNV 77
Query: 67 FSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126
S+ PKALFEQF RVAN+YFL+AALLS+TP++PFS VSM+ PL VVG+SMAKEALEDWR
Sbjct: 78 LSFVPKALFEQFRRVANLYFLLAALLSLTPVAPFSAVSMIAPLVFVVGLSMAKEALEDWR 137
Query: 127 RFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGIC 186
RF+QD +VN RK SVH G GVF ++PW K++VGDIVKV+KDQFFPADLL LSS YEDGIC
Sbjct: 138 RFVQDMKVNLRKASVHKGEGVFGHRPWHKLRVGDIVKVQKDQFFPADLLLLSSCYEDGIC 197
Query: 187 YVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDREL 246
YVETMNLDGETNLKVKRA+E T PL++D FK+F+G + CE+PNP+LYTFVGN EYDR++
Sbjct: 198 YVETMNLDGETNLKVKRALEVTLPLDDDATFKDFSGKIYCEDPNPNLYTFVGNFEYDRQV 257
Query: 247 YAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILF 306
Y +DP+QILLRDSKLRNTA+ YG VIFTGHDSKVMQNAT SPSKRS IE+KMDKII+ILF
Sbjct: 258 YPLDPNQILLRDSKLRNTAYAYGVVIFTGHDSKVMQNATKSPSKRSRIERKMDKIIYILF 317
Query: 307 AILVLISLISSIGFAVKINYQTPQWWYLKPK--ETDVYFNPGKPLVPGLAHLVTALILYG 364
+L+LIS ISSIGFAVK YQ WWYL+ + D +NP KP + GL HL+TALILYG
Sbjct: 318 TLLILISSISSIGFAVKTKYQMTDWWYLRTTGDDHDPLYNPRKPTLSGLIHLITALILYG 377
Query: 365 YLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTG 424
YLIPISLYVSIE+VK LQA FINQDI+MY +E+ PAQARTSNLNEELGQVDTILSDKTG
Sbjct: 378 YLIPISLYVSIEVVKVLQASFINQDINMYCEETANPAQARTSNLNEELGQVDTILSDKTG 437
Query: 425 TLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQ-----------NRESANAK 473
TLTCNQMD+LKCS+AGTAYGV SEVELAAA+QMA D EEQ N + ++
Sbjct: 438 TLTCNQMDYLKCSIAGTAYGVKSSEVELAAARQMAYDFEEQDGEFSDVHGQKNSQPSSMP 497
Query: 474 HKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAIC 533
H GSEIELETV+TS DG D K IK F+FEDSRL GNWL EPN D LLLFFRILAIC
Sbjct: 498 HSRLGSEIELETVVTSTDGKDQKSAIKYFSFEDSRLTGGNWLNEPNHDVLLLFFRILAIC 557
Query: 534 HTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593
HTAIPELNEETG TYEAESPDE AFLVAAREFGFEF +RTQS++ +RERYP Q VER
Sbjct: 558 HTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCKRTQSTLVVRERYPSPDQVVER 617
Query: 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNE 653
E+KILNLLDFTSKRKRMSVI++DE+GQILLLCKGADSIIFDRLSKNGRMYEEATT+ LNE
Sbjct: 618 EYKILNLLDFTSKRKRMSVIIKDEEGQILLLCKGADSIIFDRLSKNGRMYEEATTRHLNE 677
Query: 654 YGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGAT 713
YGEAGLRTLALAY++L+E+EY+AWN+EFQKAK+SIG DR+A LE VSD+ME++LILVGAT
Sbjct: 678 YGEAGLRTLALAYRKLEEAEYNAWNNEFQKAKTSIGGDRDAMLERVSDLMERELILVGAT 737
Query: 714 AVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD 773
AVEDKLQ GVPQCIDKLAQAGLKIWVLTGDKMETAINIG+ACSLLRQGMK+ICI+ SD
Sbjct: 738 AVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKRICIST-TSD 796
Query: 774 SVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA 833
S+ + KEA+K+NIL QITNA+QMIKLE DPHAA+ALII+GKTL YALEDDMK FLGLA
Sbjct: 797 SLAQDGKEAMKENILNQITNAAQMIKLENDPHAAFALIIDGKTLTYALEDDMKLQFLGLA 856
Query: 834 VECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQ 893
V+CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEGMQ
Sbjct: 857 VDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQ 916
Query: 894 IVLS 897
V++
Sbjct: 917 AVMA 920
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356550414|ref|XP_003543582.1| PREDICTED: putative phospholipid-transporting ATPase 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1385 bits (3586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 676/899 (75%), Positives = 759/899 (84%), Gaps = 15/899 (1%)
Query: 13 SQLYTFA-CLRPHVNE-TEGSVQG--CPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFS 68
S LYTF CLRP E +QG R +YCNQP + +K L YC N +STTKYN +
Sbjct: 13 SHLYTFGGCLRPTTTEEVPHPLQGPGYSRTVYCNQPQLLEKNSLFYCKNDVSTTKYNVIT 72
Query: 69 YFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRF 128
+FPKALFEQF RVANIYFL+AA LS +P+SPFSP+SM+ PLA VVG+SMAKEALED RRF
Sbjct: 73 FFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRF 132
Query: 129 MQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYV 188
+QD +VN RK S+H GNG F + W+KI VGD+VKVEKDQFFPADLL L+SSYEDGICYV
Sbjct: 133 LQDVKVNHRKASLHKGNGDFGLRSWQKIMVGDVVKVEKDQFFPADLLLLASSYEDGICYV 192
Query: 189 ETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYA 248
ETMNLDGETNLKVKR++EAT L+ D AFK+F+GT++CE+PNP LYTFVGN EY+ ++Y
Sbjct: 193 ETMNLDGETNLKVKRSLEATLSLDNDGAFKDFSGTIRCEDPNPDLYTFVGNFEYEHQVYP 252
Query: 249 IDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAI 308
+DP QILLRDSKLRNT HVYG VIFTGHDSKVMQN+T SPSKRS IEKKMD II+ LF +
Sbjct: 253 LDPGQILLRDSKLRNTDHVYGVVIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTV 312
Query: 309 LVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIP 368
L+LIS ISSIGF K YQTP+WWYL+P + F+PGK + G++HL+TALILYGYLIP
Sbjct: 313 LILISFISSIGFVFKTKYQTPKWWYLRPGNIEYQFDPGKLGLAGMSHLITALILYGYLIP 372
Query: 369 ISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTC 428
ISLYVSIE VK LQA FINQDI MYDDESG PA+ARTSNLNEELGQVDTILSDKTGTLTC
Sbjct: 373 ISLYVSIEFVKVLQATFINQDIQMYDDESGTPAEARTSNLNEELGQVDTILSDKTGTLTC 432
Query: 429 NQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQN--------RESANAKHKN--SG 478
NQMDFLKCS+AGTAYGV SEVELAAAKQMA DLEEQ R+ +N +N
Sbjct: 433 NQMDFLKCSIAGTAYGVRSSEVELAAAKQMASDLEEQELNLSNFPMRKESNVPWENITED 492
Query: 479 SEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIP 538
E EL T +TS D + IKGF FED RLM+GNWLKEPN D LLLFFRILA+CHTAIP
Sbjct: 493 EETELGTAVTSKDDGARRPAIKGFGFEDDRLMNGNWLKEPNADVLLLFFRILAVCHTAIP 552
Query: 539 ELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598
ELNEET + TYEAESPDE AFLVAAREFGFEFYRRTQSSV I ER+ GQ V+RE+KIL
Sbjct: 553 ELNEETESCTYEAESPDEGAFLVAAREFGFEFYRRTQSSVAICERFSASGQVVQREYKIL 612
Query: 599 NLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658
NLLDFTSKRKRMSVIVRDE+G I+L CKGADSIIFDRLSKNG+MY EATT+ LNEYGEAG
Sbjct: 613 NLLDFTSKRKRMSVIVRDEEGSIILFCKGADSIIFDRLSKNGKMYLEATTRHLNEYGEAG 672
Query: 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDK 718
LRTLALAY++LD+ EYS WN+EFQKAK+++G++R+ LE VSD+ME++LILVGATAVEDK
Sbjct: 673 LRTLALAYRKLDDQEYSDWNNEFQKAKTAVGSERDTMLEQVSDVMERELILVGATAVEDK 732
Query: 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKA 778
LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT +NSDSV
Sbjct: 733 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT-MNSDSVTND 791
Query: 779 AKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECAS 838
KE +K NIL QITNASQMIKLE+DPHAA+ALII+GKTL YALEDD+KH FLGLAV CAS
Sbjct: 792 GKEVIKGNILNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDVKHQFLGLAVGCAS 851
Query: 839 VICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLS 897
VICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEGMQ V++
Sbjct: 852 VICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMA 910
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356525995|ref|XP_003531605.1| PREDICTED: putative phospholipid-transporting ATPase 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1384 bits (3581), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/911 (74%), Positives = 768/911 (84%), Gaps = 14/911 (1%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGSVQGCP---RVIYCNQPHMHKKRPLKYCTN 57
MTRGRIRA+LRRS LYTF CL+P E P R +YCNQP +H K+P+ YC N
Sbjct: 1 MTRGRIRARLRRSHLYTFGCLKPSTTEEAPHPLNGPGFSRTVYCNQPLLHDKKPVLYCKN 60
Query: 58 YISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSM 117
ISTTKYN ++FPKALFEQF RVANIYFL+AA LS +P+SPFSP+SM+ PLA VVG+SM
Sbjct: 61 DISTTKYNVITFFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSM 120
Query: 118 AKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFL 177
AKEALED RRF+QD +VN RKV+ H G+G FS + W+ I VGD+VKV KDQFFPADLL L
Sbjct: 121 AKEALEDSRRFLQDVKVNRRKVNRHKGDGFFSPRSWQNIMVGDVVKVNKDQFFPADLLLL 180
Query: 178 SSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFV 237
SSSYEDGICYVETMNLDGETNLKVKR+ E T L+ DE FK+FTGT++CE+PNP+LYTFV
Sbjct: 181 SSSYEDGICYVETMNLDGETNLKVKRSSETTMTLDNDEVFKDFTGTIRCEDPNPNLYTFV 240
Query: 238 GNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKK 297
GN+EY+R++Y +DPSQILLRDSKLRNT ++YG IFTGHDSKVMQN+T SPSKRS IEKK
Sbjct: 241 GNLEYERQIYPLDPSQILLRDSKLRNTDYIYGVAIFTGHDSKVMQNSTKSPSKRSTIEKK 300
Query: 298 MDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357
MD II+ LF +L+LIS+ISSIGF K YQ P+WWYL+P + ++P K + G++HL+
Sbjct: 301 MDYIIYTLFTVLILISVISSIGFIFKTKYQAPKWWYLRPDNIEYQYDPNKVGLAGMSHLI 360
Query: 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDT 417
TALILYGYLIPISLYVSIE+VK LQA FINQDI MYD+E+G PA ARTSNLNEELGQVDT
Sbjct: 361 TALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDEETGTPADARTSNLNEELGQVDT 420
Query: 418 ILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNS 477
ILSDKTGTLTCNQMDFLKCS+AGTAYGV SEVE+AAAKQMA D E+Q+ + +N S
Sbjct: 421 ILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVEVAAAKQMASDHEDQDSDLSNFPMPKS 480
Query: 478 -----------GSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLF 526
EIELETV+TS D K IKGF FED RLM+ NWLKEPN D LL+F
Sbjct: 481 KARVSWDDVRKAEEIELETVVTSKGDEDQKHAIKGFGFEDDRLMNCNWLKEPNADDLLMF 540
Query: 527 FRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPP 586
FRILA+CHTAIPELNEETG TYEAESPDE AFLVAAREFGF F RRTQSS+FI ER+
Sbjct: 541 FRILAVCHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFAFCRRTQSSIFIHERFSA 600
Query: 587 KGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEA 646
GQ VERE+K+LNLLDFTSKRKRMSVIVRDE+G LLLCKGADSIIFDRLSKNG+ Y EA
Sbjct: 601 SGQVVEREYKLLNLLDFTSKRKRMSVIVRDEEGSFLLLCKGADSIIFDRLSKNGKNYLEA 660
Query: 647 TTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKD 706
TT+ LNEYGEAGLRTLALAY++LDE EY+AWN+EFQKAK+++GADR++ LE VSDMMEK+
Sbjct: 661 TTRHLNEYGEAGLRTLALAYRKLDEQEYTAWNNEFQKAKAAVGADRDSMLERVSDMMEKE 720
Query: 707 LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIC 766
LILVGATAVEDKLQKGVPQCID LAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIC
Sbjct: 721 LILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIC 780
Query: 767 ITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMK 826
IT +DSV K+A+KDNIL QITN SQMIKLE+DPHAA+ALII+GKTL YALEDDMK
Sbjct: 781 ITTPVTDSVATDVKQAIKDNILNQITNGSQMIKLEKDPHAAFALIIDGKTLTYALEDDMK 840
Query: 827 HHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI 886
FLGLAV+CASVICCRVSPKQKALVTRLVK+G+GKTTLAIGDGANDVGMIQEADIG+GI
Sbjct: 841 LLFLGLAVDCASVICCRVSPKQKALVTRLVKQGSGKTTLAIGDGANDVGMIQEADIGVGI 900
Query: 887 SGVEGMQIVLS 897
SGVEGMQ V++
Sbjct: 901 SGVEGMQAVMA 911
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 928 | ||||||
| TAIR|locus:2007858 | 1216 | AT1G17500 [Arabidopsis thalian | 0.959 | 0.731 | 0.702 | 0.0 | |
| TAIR|locus:2088217 | 1243 | AT3G13900 [Arabidopsis thalian | 0.964 | 0.720 | 0.693 | 0.0 | |
| TAIR|locus:2030180 | 1228 | AT1G72700 [Arabidopsis thalian | 0.965 | 0.729 | 0.691 | 0.0 | |
| TAIR|locus:2020038 | 1240 | AT1G54280 [Arabidopsis thalian | 0.938 | 0.702 | 0.698 | 0.0 | |
| TAIR|locus:2026900 | 1200 | AT1G68710 [Arabidopsis thalian | 0.946 | 0.731 | 0.570 | 2.9e-270 | |
| TAIR|locus:2102345 | 1202 | AT3G25610 [Arabidopsis thalian | 0.940 | 0.726 | 0.569 | 2e-269 | |
| TAIR|locus:2031860 | 1203 | ACA.l "autoinhibited Ca2+/ATPa | 0.943 | 0.728 | 0.561 | 9.3e-265 | |
| TAIR|locus:2025961 | 1213 | ALA3 "aminophospholipid ATPase | 0.479 | 0.366 | 0.461 | 7.6e-209 | |
| DICTYBASE|DDB_G0269380 | 1313 | DDB_G0269380 "P-type ATPase" [ | 0.451 | 0.319 | 0.414 | 1.2e-168 | |
| ZFIN|ZDB-GENE-120502-1 | 1189 | atp8b5b "ATPase, class I, type | 0.412 | 0.322 | 0.484 | 1.1e-159 |
| TAIR|locus:2007858 AT1G17500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3309 (1169.9 bits), Expect = 0., P = 0.
Identities = 634/902 (70%), Positives = 746/902 (82%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGS--VQG--CPRVIYCNQPHMHKKRPLKYCT 56
M RGRIR+KLR S +YTF CLRP +E + +QG R +YCNQPHMHKK+PLKY +
Sbjct: 1 MARGRIRSKLRLSHIYTFGCLRPSADEGQDPHPIQGPGFSRTVYCNQPHMHKKKPLKYRS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
NY+STT+YN ++FPK L+EQF+R AN YFL+AA+LSV PLSPF+ SM+ PL VVG+S
Sbjct: 61 NYVSTTRYNLITFFPKCLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
M KEALEDW RFMQD ++NA KV VH +G F + W+KI VGDIVKVEKD FFPADLL
Sbjct: 121 MLKEALEDWSRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LSSSYEDGICYVETMNLDGETNLKVKR++E T L++ ++FK+FTG ++CE+PNPSLYTF
Sbjct: 181 LSSSYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
VGN+EY+R+++ +DPSQILLRDSKLRNT +VYG V+FTGHD+KVMQN+T SPSKRS IEK
Sbjct: 241 VGNLEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEK 300
Query: 297 KMDKXXXXXXXXXXXXXXXXXXXXAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
MD A + + P+WWYL+P+E + NP P+ G HL
Sbjct: 301 TMDYIIYTLLVLLILISCISSSGFAWETKFHMPKWWYLRPEEPENLTNPSNPVYAGFVHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TAL+LYGYLIPISLYVSIE+VK LQA FIN+D+ MYD ESG+PA ARTSNLNEELGQVD
Sbjct: 361 ITALLLYGYLIPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQVD 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476
TILSDKTGTLTCNQMDFLKCS+AGT+YGV SEVE+AAA+QMA+DL+E S+
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTPR 480
Query: 477 SGS-EIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535
+ + +IE+E+ IT + IKGF FED RLMDGNWL+EP+ D +LLFFRILAICHT
Sbjct: 481 AQARDIEVESSITP------RIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHT 534
Query: 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREF 595
AIPELNEETG TYEAESPDEA+FL AA EFGF F++RTQSSV++ ER GQ +ERE+
Sbjct: 535 AIPELNEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREY 594
Query: 596 KILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYG 655
K+LNLLDFTSKRKRMSV+VRDE+GQILLLCKGADSIIF+RL+KNG++Y TTK LNEYG
Sbjct: 595 KVLNLLDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYG 654
Query: 656 EAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAV 715
EAGLRTLAL+Y++LDE EYSAWN+EF KAK+SIG+DR+ LE +SDM+EKDLILVGATAV
Sbjct: 655 EAGLRTLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAV 714
Query: 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV 775
EDKLQKGVPQCIDKLAQAGLK+WVLTGDKMETAINIG++CSLLRQGMKQICIT +NS+
Sbjct: 715 EDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSEGA 774
Query: 776 GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVE 835
+ AK AVKDNIL QIT A QM+KLE+DPHAA+ALII+GKTL YALED+MK+ FL LAV+
Sbjct: 775 SQDAK-AVKDNILNQITKAVQMVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALAVD 833
Query: 836 CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIV 895
CASVICCRVSPKQKALVTRLVKEGTGK TLAIGDGANDVGMIQEADIG+GISGVEGMQ V
Sbjct: 834 CASVICCRVSPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQAV 893
Query: 896 LS 897
++
Sbjct: 894 MA 895
|
|
| TAIR|locus:2088217 AT3G13900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3266 (1154.7 bits), Expect = 0., P = 0.
Identities = 635/916 (69%), Positives = 741/916 (80%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEG----SVQGCPRVIYCNQPHMHKKRPLKYCT 56
M R RIR+++R+S YTF CLRP E +G + G R+++CNQPH+H + L+Y +
Sbjct: 1 MGRRRIRSRIRKSHFYTFKCLRPKTLEDQGPHIINGPGYTRIVHCNQPHLHLAKVLRYTS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
NY+STT+YN ++ PK L+EQF+RVAN YFL+AA+LSV PLSPF+ SM+ PL VVG+S
Sbjct: 61 NYVSTTRYNLITFLPKCLYEQFHRVANFYFLVAAILSVFPLSPFNKWSMIAPLIFVVGLS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
M KEALEDWRRFMQD +VN+RK +VH G+G F + W+K++VGD+VKVEKDQFFPADLL
Sbjct: 121 MGKEALEDWRRFMQDVKVNSRKATVHRGDGDFGRRKWKKLRVGDVVKVEKDQFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LSSSYEDGICYVETMNLDGETNLKVKR ++ T PL D+ F+ F+GT+KCE+PNP+LYTF
Sbjct: 181 LSSSYEDGICYVETMNLDGETNLKVKRCLDVTLPLERDDTFQSFSGTIKCEDPNPNLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
VGN+EYD ++Y +DPSQILLRDSKLRNT++VYG V+FTGHD+KVMQN+T SPSKRS IEK
Sbjct: 241 VGNLEYDGQVYPLDPSQILLRDSKLRNTSYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEK 300
Query: 297 KMDKXXXXXXXXXXXXXXXXXXXXAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
+MD AV WWYL+P + + NP P + HL
Sbjct: 301 RMDYIIYTLFALLVLVSFISSLGFAVMTKMHMGDWWYLRPDKPERLTNPRNPFHAWVVHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TA++LYGYLIPISLYVSIE+VK LQA FINQD+ MYD ESG PAQARTSNLNEELGQVD
Sbjct: 361 ITAVLLYGYLIPISLYVSIELVKVLQATFINQDLQMYDSESGTPAQARTSNLNEELGQVD 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476
TILSDKTGTLTCNQMDFLKCS+AGT+YGV SEVELAAAKQMAIDL+E+ E +
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTSYGVRASEVELAAAKQMAIDLDEEQGEEVTHLPRT 480
Query: 477 SG-------------SEIELETVITSNDGNDFKRR--IKGFNFEDSRLMDGNWLKEPNVD 521
G S+IELETVIT+ D D + IKGF+FED RLM GNWL EPN D
Sbjct: 481 RGRMHGYAKMPSKTSSDIELETVITATDEGDQTQSTGIKGFSFEDQRLMGGNWLNEPNSD 540
Query: 522 TLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIR 581
+L+F RILA+CHTAIPE++E+TG TYEAESPDE AFLVAA EFGFEF +RTQSSVFI
Sbjct: 541 DILMFLRILAVCHTAIPEVDEDTGKCTYEAESPDEVAFLVAAGEFGFEFTKRTQSSVFIS 600
Query: 582 ERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGR 641
ER+ GQPVERE+K+LN+LDFTSKRKRMSVIVRDE GQILLLCKGADSIIF+RLSKNG+
Sbjct: 601 ERH--SGQPVEREYKVLNVLDFTSKRKRMSVIVRDEKGQILLLCKGADSIIFERLSKNGK 658
Query: 642 MYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSD 701
Y EAT+K LN YGEAGLRTLAL+Y++LDE+EYS WNSEF KAK+S+GADR+ LE VSD
Sbjct: 659 NYLEATSKHLNGYGEAGLRTLALSYRKLDETEYSIWNSEFHKAKTSVGADRDEMLEKVSD 718
Query: 702 MMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQG 761
MMEK+LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG+ACSLLRQG
Sbjct: 719 MMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQG 778
Query: 762 MKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821
MKQI I N + + + A ++NILMQI NASQMIKLE+DPHAA+ALII+GKTL YAL
Sbjct: 779 MKQIYIALRNEEGSSQDPEAAARENILMQIINASQMIKLEKDPHAAFALIIDGKTLTYAL 838
Query: 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEAD 881
EDD+K+ FL LAV+CASVICCRVSPKQKALVTRL KEGTGKTTLAIGDGANDVGMIQEAD
Sbjct: 839 EDDIKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEAD 898
Query: 882 IGIGISGVEGMQIVLS 897
IG+GISGVEGMQ V++
Sbjct: 899 IGVGISGVEGMQAVMA 914
|
|
| TAIR|locus:2030180 AT1G72700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3262 (1153.3 bits), Expect = 0., P = 0.
Identities = 628/908 (69%), Positives = 747/908 (82%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGS--VQG--CPRVIYCNQPHMHKKRPLKYCT 56
M RGRIR+KLR S LYTF CLRP E + S +QG R ++CNQPHMHKK+PL+Y +
Sbjct: 1 MARGRIRSKLRLSLLYTFGCLRPATLEGQDSQPIQGPGFSRTVFCNQPHMHKKKPLRYRS 60
Query: 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
NY+STT+YN ++FPK+L+EQF+R AN+YFL+AA+LSV PLSPF+ SM+ PL VVG+S
Sbjct: 61 NYVSTTRYNLITFFPKSLYEQFHRAANLYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLS 120
Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
M KEALEDWRRFMQD ++NARK VH +GVF + W+K+ VGDIVKVEKD+FFPADLL
Sbjct: 121 MLKEALEDWRRFMQDVKINARKTCVHKSDGVFRQRKWKKVSVGDIVKVEKDEFFPADLLL 180
Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
LSSSYEDGICYVETMNLDGETNLKVKR++E + PL++DE+FK F T++CE+PNP+LYTF
Sbjct: 181 LSSSYEDGICYVETMNLDGETNLKVKRSLEVSLPLDDDESFKNFMATIRCEDPNPNLYTF 240
Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
VGN+E++R+ + +DPSQILLRDSKLRNT +VYG V+FTG D+KVMQN+T SPSKRS IE+
Sbjct: 241 VGNLEFERQTFPLDPSQILLRDSKLRNTTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIER 300
Query: 297 KMDKXXXXXXXXXXXXXXXXXXXXAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
MD A + + P+ WYL+P E + NP P+ G+ HL
Sbjct: 301 TMDYIIYTLLVLLILISCISSSGFAWETEFHMPKMWYLRPGEPIDFTNPINPIYAGVVHL 360
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
+TAL+LYGYLIPISLYVSIE+VK QA FINQD+ MYDDESG+PA ARTSNLNEELGQV
Sbjct: 361 ITALLLYGYLIPISLYVSIEVVKVWQASFINQDLHMYDDESGVPANARTSNLNEELGQVH 420
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHK- 475
TILSDKTGTLTCNQMDFLKCS+AGT+YGV SEVE+AAAKQMA+DLEE S+ + +
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQT 480
Query: 476 ------NSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRI 529
+S E+E V N+ N + IKGF FED+RLM+GNWL+E + +L FFRI
Sbjct: 481 KVYGTWDSSRTQEIE-VEGDNNYNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRI 539
Query: 530 LAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589
LAICHTAIPELNEETG TYEAESPDEA+FL AAREFGFEF++RTQSSVFIRER+ GQ
Sbjct: 540 LAICHTAIPELNEETGKYTYEAESPDEASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQ 599
Query: 590 PVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTK 649
+ERE+K+LNLL+FTSKRKRM+VIVRDE+GQILLLCKGADSIIF+RL+KNG+ Y TT+
Sbjct: 600 IIEREYKVLNLLEFTSKRKRMTVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPTTR 659
Query: 650 LLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLIL 709
L EYGEAGLRTLALAY++LDE EY+AWNSEF KAK+SIG+DR+ LE +DM+EK+LIL
Sbjct: 660 HLTEYGEAGLRTLALAYRKLDEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKELIL 719
Query: 710 VGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITA 769
+GATAVEDKLQKGVPQCIDKLAQAGLK+WVLTGDKMETAINIGFACSLLRQGM+QICIT+
Sbjct: 720 IGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICITS 779
Query: 770 LNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHF 829
+NS+ + +K VK+NIL Q+T A QM+KLE+DPHAA+ALII+GKTL YALEDDMK+ F
Sbjct: 780 MNSEGGSQDSKRVVKENILNQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALEDDMKYQF 839
Query: 830 LGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGV 889
L LAV+CASVICCRVSPKQKALV RLVKEGTGKTTLAIGDGANDVGMIQEADIG+GISGV
Sbjct: 840 LALAVDCASVICCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGV 899
Query: 890 EGMQIVLS 897
EGMQ V++
Sbjct: 900 EGMQAVMA 907
|
|
| TAIR|locus:2020038 AT1G54280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3200 (1131.5 bits), Expect = 0., P = 0.
Identities = 622/890 (69%), Positives = 733/890 (82%)
Query: 23 PHVNETEGSVQGCPRVIYCNQPHMHKKRPL-KYCTNYISTTKYNFFSYFPKALFEQFNRV 81
PHV G G R+++CNQPH+H L +Y +NY+STT+YN ++ PK L+EQF+RV
Sbjct: 31 PHV--INGP--GYTRIVHCNQPHLHLATKLIRYRSNYVSTTRYNLLTFLPKCLYEQFHRV 86
Query: 82 ANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSV 141
AN YFL+AA+LSV PLSPF+ SM+ PL VVG+SM KEALEDWRRFMQD EVN+RK SV
Sbjct: 87 ANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMGKEALEDWRRFMQDVEVNSRKASV 146
Query: 142 HVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKV 201
H G+G F + W++I+VGDIV+VEKD+FFPADLL LSSSYEDGICYVETMNLDGETNLKV
Sbjct: 147 HKGSGDFGRRTWKRIRVGDIVRVEKDEFFPADLLLLSSSYEDGICYVETMNLDGETNLKV 206
Query: 202 KRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKL 261
KR ++AT L +DE+F+ F+GT+KCE+PNP+LYTFVGN+E D ++Y +DP+QILLRDSKL
Sbjct: 207 KRCLDATLALEKDESFQNFSGTIKCEDPNPNLYTFVGNLECDGQVYPLDPNQILLRDSKL 266
Query: 262 RNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKXXXXXXXXXXXXXXXXXXXXA 321
RNTA+VYG V+FTGHD+KVMQN+T SPSKRS IEK+MD A
Sbjct: 267 RNTAYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFALLLTVSFISSLGFA 326
Query: 322 VKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFL 381
V +WWYL+P + + NP PL + HL+TAL+LYGYLIPISLYVSIE+VK L
Sbjct: 327 VMTKLLMAEWWYLRPDKPESLTNPTNPLYAWVVHLITALLLYGYLIPISLYVSIEVVKVL 386
Query: 382 QAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGT 441
QA FINQD+ +YD ESG PAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCS+AGT
Sbjct: 387 QAHFINQDLQLYDSESGTPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGT 446
Query: 442 AYGVSPSEVELAAAKQMAIDLEEQNRESAN-----------AK-HKNSGSEIELETVITS 489
+YGV SEVELAAAKQMA+DLEE+ E AN AK + S+ ELETV+T+
Sbjct: 447 SYGVRASEVELAAAKQMAMDLEEKGEEVANLSMNKGRTQRYAKLASKTSSDFELETVVTA 506
Query: 490 NDGNDFKRR--IKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNL 547
+D D K+ +KGF+FED+RLM+ NWL EPN D +L+FFRILA+CHTAIPE++E+TG
Sbjct: 507 SDEKDQKQNTGVKGFSFEDNRLMNENWLNEPNSDDILMFFRILAVCHTAIPEVDEDTGMC 566
Query: 548 TYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKR 607
TYEAESPDE AFLVA+REFGFEF +RTQSSVFI ER+ GQPV+RE+KILNLLDFTSKR
Sbjct: 567 TYEAESPDEVAFLVASREFGFEFTKRTQSSVFIAERFSSSGQPVDREYKILNLLDFTSKR 626
Query: 608 KRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYK 667
KRMS IVRDE+GQILLLCKGADSIIF+RLSK+G+ Y AT+K LN YGEAGLRTLAL Y+
Sbjct: 627 KRMSAIVRDEEGQILLLCKGADSIIFERLSKSGKEYLGATSKHLNVYGEAGLRTLALGYR 686
Query: 668 QLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCI 727
+LDE+EY+AWNSEF KAK+S+GADR+ LE VSDMMEK+LILVGATAVEDKLQKGVPQCI
Sbjct: 687 KLDETEYAAWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCI 746
Query: 728 DKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNI 787
D LAQAGLKIWVLTGDKMETAINIG+ACSLLRQGMKQI I+ N + + ++ A K++I
Sbjct: 747 DNLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQISISLTNVEESSQNSEAAAKESI 806
Query: 788 LMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK 847
LMQITNASQMIK+E+DPHAA+ALII+GKTL YAL+DD+K+ FL LAV+CASVICCRVSPK
Sbjct: 807 LMQITNASQMIKIEKDPHAAFALIIDGKTLTYALKDDVKYQFLALAVDCASVICCRVSPK 866
Query: 848 QKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLS 897
QKALVTRL KEGTGKTTLAIGDGANDVGMIQEADIG+GISGVEGMQ V++
Sbjct: 867 QKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMA 916
|
|
| TAIR|locus:2026900 AT1G68710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2599 (920.0 bits), Expect = 2.9e-270, P = 2.9e-270
Identities = 517/906 (57%), Positives = 656/906 (72%)
Query: 5 RIRAKLRRSQLYTFACLRPHVNETEGSV--QGCPRVIYCNQPHMHKKRPLKYCTNYISTT 62
R R +L+ S+LYT C + + + G RV+YCN+P + Y NY+ TT
Sbjct: 8 RRRRRLQLSKLYTLTCAQACFKQDHSQIGGPGFSRVVYCNEPDSPEADSRNYSDNYVRTT 67
Query: 63 KYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEAL 122
KY ++ PK+LFEQF RVAN YFL+ +L+ TPL+P++ S ++PL V+G +M KE +
Sbjct: 68 KYTLATFLPKSLFEQFRRVANFYFLVTGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGV 127
Query: 123 EDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182
EDWRR QD EVN RKV VH G+G F K W+ + +GDIVKVEK++FFPADL+ LSSSYE
Sbjct: 128 EDWRRQKQDNEVNNRKVKVHRGDGSFDAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYE 187
Query: 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEY 242
D ICYVETMNLDGETNLKVK+ +E TS L ++ FK F VKCE+PN +LY+FVG +E
Sbjct: 188 DAICYVETMNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMEL 247
Query: 243 DRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKXX 302
Y + P Q+LLRDSKLRNT ++G+VIFTGHD+KV+QN+T PSKRS IEKKMDK
Sbjct: 248 KGAKYPLSPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKII 307
Query: 303 XXXXXXXXXXXXXXXXXXAVK----INYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358
V + + WYL+P + ++F+P + V + H +T
Sbjct: 308 YLMFFMVITMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLT 367
Query: 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTI 418
A++LY Y IPISLYVSIEIVK LQ+IFINQDI MY +E+ PA+ARTSNLNEELGQVDTI
Sbjct: 368 AVMLYSYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTI 427
Query: 419 LSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSG 478
LSDKTGTLTCN M+F+KCSVAGTAYG +EVE+A ++ L Q+ E+
Sbjct: 428 LSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDEN--------- 478
Query: 479 SEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIP 538
+I++E S + + +KGFNF D R+M+GNW+ E + D + FFR+LA+CHT IP
Sbjct: 479 -DIDMEY---SKEAITEESTVKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIP 534
Query: 539 ELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598
E++E+T ++YEAESPDEAAF++AARE GFEF+ RTQ+++ +RE G+ VER +K+L
Sbjct: 535 EVDEDTEKISYEAESPDEAAFVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVL 594
Query: 599 NLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658
N+L+F S RKRMSVIV++EDG++LLLCKGAD+++F+RLSKNGR +EE T +NEY +AG
Sbjct: 595 NVLEFNSTRKRMSVIVQEEDGKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAG 654
Query: 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDK 718
LRTL LAY++LDE EY +N +AKSS+ ADRE+ +E V++ +EKDLIL+GATAVEDK
Sbjct: 655 LRTLILAYRELDEKEYKVFNERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDK 714
Query: 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD--SVG 776
LQ GVP CIDKLAQAG+KIWVLTGDKMETAINIGFACSLLRQ MKQI I + S+
Sbjct: 715 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLE 774
Query: 777 KAAKEAV-----KDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLG 831
K ++ V K+N+L QI N +K A+ALII+GK+LAYAL+DD+KH FL
Sbjct: 775 KTGEKDVIAKASKENVLSQIINGKTQLKYSGGN--AFALIIDGKSLAYALDDDIKHIFLE 832
Query: 832 LAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEG 891
LAV CASVICCR SPKQKALVTRLVK G GKTTLAIGDGANDVGM+QEADIG+GISGVEG
Sbjct: 833 LAVSCASVICCRSSPKQKALVTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEG 892
Query: 892 MQIVLS 897
MQ V+S
Sbjct: 893 MQAVMS 898
|
|
| TAIR|locus:2102345 AT3G25610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2591 (917.1 bits), Expect = 2.0e-269, P = 2.0e-269
Identities = 517/908 (56%), Positives = 657/908 (72%)
Query: 5 RIRAKLRRSQLYTFACLRPHVNETEGSV--QGCPRVIYCNQPHMHKKRPLKYCTNYISTT 62
R R +L S++Y++ C + E ++ G RV+YCN+P Y NY+ +T
Sbjct: 6 RRRRRLHLSKIYSYTCGKSSFQEDHSNIGGPGFSRVVYCNEPGSPAAERRNYAGNYVRST 65
Query: 63 KYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEAL 122
KY S+FPK+LFEQF RVAN YFL+ +LS+T LSP+ VS LLPLA+V+ +M KE +
Sbjct: 66 KYTVASFFPKSLFEQFRRVANFYFLVTGILSLTDLSPYGAVSALLPLALVISATMVKEGI 125
Query: 123 EDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182
EDWRR QD EVN RKV VH GNG+F + W ++VGDIV+VEKD+FFPADLL LSSSYE
Sbjct: 126 EDWRRKQQDIEVNNRKVKVHDGNGIFRQEEWRNLRVGDIVRVEKDEFFPADLLLLSSSYE 185
Query: 183 DGICYVETMNLDGETNLKVKRAMEATSPL-NEDEAFKEFTGTVKCENPNPSLYTFVGNIE 241
D +CYVETMNLDGETNLKVK+ +EATS L N+D FK+F G V+CE+PN +LY FVG +
Sbjct: 186 DSVCYVETMNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGTLA 245
Query: 242 YDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKX 301
+ E + + QILLRDSKLRNT +VYG+V+FTGHD+KV+QN+T PSKRS IE+ MDK
Sbjct: 246 LEEERFPLSIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMDKI 305
Query: 302 XXXXXXXXXXXXXXXXXXXAV-----KINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
V K+ + WYLKP + D++F+P + + + H
Sbjct: 306 IYLMFGLVFLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIYHF 365
Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
TA +LY Y IPISLYVSIEIVK LQ+IFIN+DI MY +E+ PAQARTSNLNEELG VD
Sbjct: 366 FTATMLYSYFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEELGMVD 425
Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476
TILSDKTGTLTCN M+F+KCS+AG AYG +EVE A MA+ S + N
Sbjct: 426 TILSDKTGTLTCNSMEFIKCSIAGKAYGRGITEVERA----MAV-------RSGGSPLVN 474
Query: 477 SGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTA 536
+L+ V+ + ++KGFNFED R+M+GNW+++P L FFR+LA+CHTA
Sbjct: 475 E----DLDVVVDQSGP-----KVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTA 525
Query: 537 IPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFK 596
IPE +EE+GN++YEAESPDEAAF+VAAREFGFEF+ RTQ+ + RE G+ VER ++
Sbjct: 526 IPETDEESGNVSYEAESPDEAAFVVAAREFGFEFFNRTQNGISFRELDLVSGEKVERVYR 585
Query: 597 ILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGE 656
+LN+L+F S RKRMSVIVRD+DG++LLL KGAD+++F+RL+KNGR +E T + +N+Y +
Sbjct: 586 LLNVLEFNSTRKRMSVIVRDDDGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYAD 645
Query: 657 AGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVE 716
AGLRTL LAY+++DE+EY +N F +AK+S+ DREA ++ ++D ME+DLIL+GATAVE
Sbjct: 646 AGLRTLVLAYREVDENEYIEFNKSFNEAKASVSEDREALIDEITDKMERDLILLGATAVE 705
Query: 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITA----LNS 772
DKLQ GVP+CIDKLAQAG+KIWVLTGDKMETAINIGFA SLLRQ MKQI I + S
Sbjct: 706 DKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFASSLLRQEMKQIIINLETPQIKS 765
Query: 773 --DSVGKAAKE-AVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHF 829
S GK E A +++++MQ+ ++ A+ALII+GK+L YALED++K F
Sbjct: 766 LEKSGGKDEIELASRESVVMQLQEGKALLAASGASSEAFALIIDGKSLTYALEDEIKKMF 825
Query: 830 LGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGV 889
L LA CASVICCR SPKQKALVTRLVK GTGKTTLAIGDGANDVGM+QEADIG+GISGV
Sbjct: 826 LDLATSCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGV 885
Query: 890 EGMQIVLS 897
EGMQ V+S
Sbjct: 886 EGMQAVMS 893
|
|
| TAIR|locus:2031860 ACA.l "autoinhibited Ca2+/ATPase II" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2547 (901.6 bits), Expect = 9.3e-265, P = 9.3e-265
Identities = 514/915 (56%), Positives = 651/915 (71%)
Query: 1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGSV--QGCPRVIYCNQPHMHKKRPLKYCTNY 58
MT+ R R +L S +Y F + + E + G RV+YCN+P+ Y NY
Sbjct: 1 MTKCR-RRRLHLSNIYAFKGRKSNFQEDHSHIGGPGFSRVVYCNEPNSPAAERRNYVGNY 59
Query: 59 ISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMA 118
+ +TKY S+ PK+LFEQF RVAN YFL+ +LS+T LSP+SP+S LLPL V+ SM
Sbjct: 60 VRSTKYTLASFIPKSLFEQFRRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMV 119
Query: 119 KEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLS 178
KEA+EDW R QD E+N RKV VH GNG+F + W ++VG+IV+VEKD+FFPADLL LS
Sbjct: 120 KEAIEDWGRKKQDIEMNNRKVKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLS 179
Query: 179 SSYEDGICYVETMNLDGETNLKVKRAMEATSP-LNEDEAFKEFTGTVKCENPNPSLYTFV 237
SSYED ICYVETMNLDGETNLKVK+ +EATS L+ED FKE VKCE+PN LYTFV
Sbjct: 180 SSYEDSICYVETMNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFV 239
Query: 238 GNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKK 297
G + ++ + + +Q+LLRDSKLRNT ++YG V+FTGHD+KV+QN+T PSKRS IE+K
Sbjct: 240 GTLHFEEQRLPLSITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERK 299
Query: 298 MDKXXXXXXXXXXXXXXXXXXXXAVKI------NYQTPQWWYLKPKETDVYFNPGKPLVP 351
MDK ++ N + WYL+P D++F+P + +
Sbjct: 300 MDKIIYLMFGVVFLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMA 359
Query: 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEE 411
+ H TA++LY Y IPISLYVSIEIVK LQ++FIN DI MY +E+ PA ARTSNLNEE
Sbjct: 360 AVYHFFTAVMLYSYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEE 419
Query: 412 LGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESAN 471
LG VDTILSDKTGTLTCN M+F+KCS+AGTAYG +EVE + MA+ N S
Sbjct: 420 LGMVDTILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVE----RSMAM---RSNGSSL- 471
Query: 472 AKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILA 531
G +++ V+ G +IKGFNF D R+M GNW+K+ + L FFR+LA
Sbjct: 472 -----VGDDLD---VVVDQSGP----KIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLA 519
Query: 532 ICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPV 591
+CHTAIPE +E TG+++YEAESPDEAAF+VAAREFGFEF+ RTQ+ + RE G+ V
Sbjct: 520 VCHTAIPETDEATGSVSYEAESPDEAAFVVAAREFGFEFFSRTQNGISFRELDLASGKTV 579
Query: 592 EREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLL 651
ER +++LN+L+F S RKRMSVIVRDEDG++LLL KGAD+++F+RL+KNGR +EE T + +
Sbjct: 580 ERVYRLLNVLEFNSARKRMSVIVRDEDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHV 639
Query: 652 NEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVG 711
NEY +AGLRTL LAY+++DE+EY ++ F +AK+S+ ADRE+ ++ +++ ME+DLIL+G
Sbjct: 640 NEYADAGLRTLILAYREVDENEYIEFSKNFNEAKNSVTADRESLIDEITEQMERDLILLG 699
Query: 712 ATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT--- 768
ATAVEDKLQ GVP CIDKLAQAG+KIWVLTGDKMETAINIGFACSLLRQ MKQI I
Sbjct: 700 ATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQEMKQIIINLET 759
Query: 769 ----ALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP--HAAYALIIEGKTLAYALE 822
AL A + A +++++ Q+ ++ H A+ALII+GK+L YALE
Sbjct: 760 PHIKALEKAGEKDAIEHASRESVVNQMEEGKALLTASSSASSHEAFALIIDGKSLTYALE 819
Query: 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADI 882
DD K FL LA CASVICCR SPKQKALVTRLVK GTGKTTLAIGDGANDVGM+QEADI
Sbjct: 820 DDFKKKFLDLATGCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADI 879
Query: 883 GIGISGVEGMQIVLS 897
G+GISGVEGMQ V+S
Sbjct: 880 GVGISGVEGMQAVMS 894
|
|
| TAIR|locus:2025961 ALA3 "aminophospholipid ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1032 (368.3 bits), Expect = 7.6e-209, Sum P(2) = 7.6e-209
Identities = 211/457 (46%), Positives = 291/457 (63%)
Query: 23 PHVNETEGSVQG-CP--RVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFN 79
P T G +Q P R +YCN +P+++ N ISTTKYN F++ PK LFEQF
Sbjct: 19 PSRTVTLGHIQPQAPTYRTVYCND--RESNQPVRFKGNSISTTKYNVFTFLPKGLFEQFR 76
Query: 80 RVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKV 139
R+ANIYFL + LS+TP+SP SP++ + PL++V+ VS+ KEA EDW+RF D +N V
Sbjct: 77 RIANIYFLGISCLSMTPISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSINNSTV 136
Query: 140 SVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNL 199
+ S PW K+QVGDIVK++KD FFPAD+LF+SS+ DGICYVET NLDGETNL
Sbjct: 137 EILQDQQWVSI-PWRKLQVGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDGETNL 195
Query: 200 KVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDS 259
K+++A+E T E EF G ++CE PN SLYTF GN+ ++ + P Q+LLR
Sbjct: 196 KIRKALERTWDYLVPEKAYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLLLRGC 255
Query: 260 KLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKXXXXXXXXXXXXXXXXXXX 319
LRNT ++ G+V+FTGH++KVM NA +PSKRS +EKK+DK
Sbjct: 256 SLRNTEYIVGAVVFTGHETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIG 315
Query: 320 XAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVK 379
++ + + YL +D + G L+ G T + L+ +IPISLYVSIE++K
Sbjct: 316 CSIVTDREDK---YLGLHNSDWEYRNG--LMIGFFTFFTLVTLFSSIIPISLYVSIEMIK 370
Query: 380 FLQAI-FINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSV 438
F+Q+ FIN+D++MY E+ PA ARTSNLNEELGQV+ I SDKTGTLT N M+F KCS+
Sbjct: 371 FIQSTQFINRDLNMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSI 430
Query: 439 AGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHK 475
G +YG +E+E A++ + ++E+ R + + K
Sbjct: 431 GGVSYGCGVTEIEKGIAQRHGLKVQEEQRSTGAIREK 467
|
|
| DICTYBASE|DDB_G0269380 DDB_G0269380 "P-type ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 859 (307.4 bits), Expect = 1.2e-168, Sum P(2) = 1.2e-168
Identities = 180/434 (41%), Positives = 265/434 (61%)
Query: 34 GCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLS 93
G R I+ NQP + P K+ N ISTTKY +S+ PK L+EQF R AN YFL+ A++
Sbjct: 160 GSSRNIFINQPE--RNIPFKFIHNKISTTKYTPWSFIPKNLYEQFRRAANFYFLVIAVIQ 217
Query: 94 VTP-LSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKP 152
+ P +SP + + +PL V+ V+ KE +ED +R + DK VN + + NG F P
Sbjct: 218 LIPGISPVNAYTTWIPLIFVLAVTAVKEGIEDIKRNLSDKTVNNLDCRI-LRNGKFEIVP 276
Query: 153 WEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSP-L 211
W++++VGDI +V K + FPADL+ L+SS + G+CY+ET NLDGETNLK ++A+ T L
Sbjct: 277 WKQVKVGDICQVNKGERFPADLVVLNSSEQHGVCYIETSNLDGETNLKQRQAIPQTFEIL 336
Query: 212 NEDEAFKEFTGTVKCENPNPSLYTFVGNIEY--DRELYAIDPSQILLRDSKLRNTAHVYG 269
+E F G ++CE+PN +Y + G I+ D + + ++ +Q LLR LRNT +YG
Sbjct: 337 RSEEDLAHFRGNIECEHPNNVIYVYNGAIQMTDDSQKHPLNNTQTLLRGCVLRNTEWIYG 396
Query: 270 SVIFTGHDSKVMQNATTSPSKRSGIEKKMDKXXXXXXXXXXXXXXXXXXXXAVKINYQTP 329
+V++TG D+K+MQN+T +PSKRS +EK +++ + +
Sbjct: 397 AVVYTGEDTKLMQNSTDAPSKRSTLEKLVNRALINLFIIMFVVCVVGMIVSVILTSTNID 456
Query: 330 QWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQD 389
+ WYL ++ DV + +L + +I + +IPISLYVS+E+VK QA+++ D
Sbjct: 457 KQWYLDFEQKDVR--------KAVLNLFSFMIAFAVMIPISLYVSLELVKVAQAVYVGWD 508
Query: 390 ISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSE 449
+ MYD E+ PA+ RTSNL+EELGQ++ I SDKTGTLT NQMDFLKCSV YG E
Sbjct: 509 VKMYDPETNTPARTRTSNLSEELGQIEYIFSDKTGTLTRNQMDFLKCSVGKMVYGNVERE 568
Query: 450 VELAAAKQMAIDLE 463
+ ++ K I +E
Sbjct: 569 DDASSNKPYGIAME 582
|
|
| ZFIN|ZDB-GENE-120502-1 atp8b5b "ATPase, class I, type 8B, member 5b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 875 (313.1 bits), Expect = 1.1e-159, Sum P(2) = 1.1e-159
Identities = 198/409 (48%), Positives = 269/409 (65%)
Query: 502 FNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEET-GNLTYEAESPDEAAFL 560
F F D +L++ L P V FFR+LA+CHT +PE E+T G+L Y+A+SPDE A +
Sbjct: 453 FFFHDHKLVEAVKLGSPEVHA---FFRLLALCHTVMPE--EKTQGDLFYQAQSPDEGALV 507
Query: 561 VAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQ 620
AAR FGF F RT ++ + E G +E +++L +LDF + RKRMSVIVR+ +G+
Sbjct: 508 TAARNFGFVFRARTPETISVVEM----G--IETTYELLAVLDFNNVRKRMSVIVRNPEGK 561
Query: 621 ILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSE 680
++L CKGAD+II++RL + E TT+ LNEY GLRTLALAYK LDE +++ W
Sbjct: 562 LMLYCKGADTIIYERLHPSCSKVMEVTTEHLNEYAGEGLRTLALAYKDLDEDKFAEWRRR 621
Query: 681 FQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740
+A ++ DRE L+ + + +EKDLIL+GA+AVEDKLQ GVPQ I++LA+A +KIWVL
Sbjct: 622 HHEASIAL-EDREEKLDAIYEEIEKDLILIGASAVEDKLQDGVPQTIEQLAKADIKIWVL 680
Query: 741 TGDKMETAINIGFACSLLRQGMKQICITALNS-DSVGKAAKEAVK-------DNILMQ-- 790
TGDK ETA NIG++C++LR+ M +I I A N+ + V + A K D M+
Sbjct: 681 TGDKQETAENIGYSCNMLREEMTEIFIVAANTAEEVREELVNARKKMSPESGDEPPMEKS 740
Query: 791 --ITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQ 848
+ SQ+++ E+ Y L+I G +LA+AL+ DM+ L A C +VICCRV+P Q
Sbjct: 741 RFLGKKSQVVEDEK-VDGEYGLVINGHSLAFALQKDMQVELLRTACMCQTVICCRVTPLQ 799
Query: 849 KALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLS 897
KA V LVK+ TLAIGDGANDV MI+ A IG+GISG EGMQ VLS
Sbjct: 800 KAQVVELVKKHKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGMQAVLS 848
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LNQ4 | ALA4_ARATH | 3, ., 6, ., 3, ., 1 | 0.7161 | 0.9590 | 0.7319 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| eugene3.00440139 | aminophospholipid ATPase (1227 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 928 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 6e-63 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 9e-51 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-41 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 9e-25 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-23 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 5e-20 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 4e-15 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 4e-13 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 8e-11 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-10 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-09 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-07 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 4e-07 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-05 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-05 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 4e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 8e-04 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 1021 bits (2641), Expect = 0.0
Identities = 413/847 (48%), Positives = 556/847 (65%), Gaps = 46/847 (5%)
Query: 54 YCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIV 112
+C+N ISTTKY ++ PK LFEQF R AN+YFL+ ALL P LSP + ++PLA V
Sbjct: 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60
Query: 113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPA 172
+ V+ KEA+ED RR +DKEVN R V G+G F PW+ ++VGDIVKV+KD+ PA
Sbjct: 61 LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120
Query: 173 DLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPS 232
DLL LSSS DG+CYVET NLDGETNLK+++A+E T + +++ K F+G ++CE PN S
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNAS 180
Query: 233 LYTFVGNIEY-DRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKR 291
LY+F GN+ Y + P ILLR LRNT V G V++TGHD+K+M+NAT +PSKR
Sbjct: 181 LYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240
Query: 292 SGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVP 351
S +EK+++ +I ILF +L ++ LISS+G + + WY++ +
Sbjct: 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDV-----SERNAAAN 295
Query: 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEE 411
G +T LIL+ LIPISLYVS+E+VK +QA FIN D+ MY +++ PA RTSNLNEE
Sbjct: 296 GFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEE 355
Query: 412 LGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESAN 471
LGQV+ I SDKTGTLT N M+F KCS+AG +YG +E++ +++ +E +N
Sbjct: 356 LGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENSM--- 412
Query: 472 AKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILA 531
KGF F D RL+D +PN + FF LA
Sbjct: 413 ------------------------LVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALA 448
Query: 532 ICHTAIPELNEE-TGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590
+CHT +PE N++ +TY+A SPDEAA + AAR+ GF F+ RT S+ +
Sbjct: 449 LCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEM----HG 504
Query: 591 VEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKL 650
+E++ILN+L+F S RKRMSVIVR+ DG+I LLCKGAD++IF RLS G E T +
Sbjct: 505 ETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEH 564
Query: 651 LNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILV 710
L Y GLRTL +AY++L E EY WN E+ +A +++ DRE L+ V++ +EKDLIL+
Sbjct: 565 LENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKLDVVAESIEKDLILL 623
Query: 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL 770
GATA+EDKLQ+GVP+ I+ L QAG+KIWVLTGDK+ETAINIG++C LL + M+QI I
Sbjct: 624 GATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVI--- 680
Query: 771 NSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFL 830
SDS+ A +V+ I + S+ D AL+I+GK+L YAL+++++ FL
Sbjct: 681 TSDSLD--ATRSVEAAIKFGLEGTSEEFNNLGD-SGNVALVIDGKSLGYALDEELEKEFL 737
Query: 831 GLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVE 890
LA++C +VICCRVSP QKA V RLVK+ TGKTTLAIGDGANDV MIQEAD+G+GISG E
Sbjct: 738 QLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKE 797
Query: 891 GMQIVLS 897
GMQ V++
Sbjct: 798 GMQAVMA 804
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 577 bits (1488), Expect = 0.0
Identities = 332/890 (37%), Positives = 499/890 (56%), Gaps = 82/890 (9%)
Query: 37 RVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP 96
R++Y N P +R ++ N I T KY+ FS+ P+ LFEQF+RVA IYFL+ A+L+ P
Sbjct: 71 RLVYLNDPEKSNER-FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLP 129
Query: 97 -LSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEK 155
L+ F + +LPLA V+ V+ K+A EDWRR D+ N R V V + F K W+
Sbjct: 130 QLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQ-FQEKKWKD 188
Query: 156 IQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEAT-SPLNED 214
I+VG+I+K++ + P D++ LS+S G+ YV+T+NLDGE+NLK + A + T S + E
Sbjct: 189 IRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEK 248
Query: 215 EAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFT 274
E + G +KCE PN ++Y F N+E D + ++ PS I+LR +L+NTA G ++
Sbjct: 249 E---KINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYC 305
Query: 275 GHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYL 334
G ++K M N + +PSKRS +E +M+ I IL L+ + I S+ AV W
Sbjct: 306 GRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAV--------WLRR 357
Query: 335 KPKETDVY-------FNPGKP-----LVPGLAHLVT---ALILYGYLIPISLYVSIEIVK 379
E D F+ G P G T ++I++ +IPISLY+S+E+V+
Sbjct: 358 HRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVR 417
Query: 380 FLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVA 439
QA F+ +D MYD+ S Q R N+NE+LGQ+ + SDKTGTLT N+M+F S+
Sbjct: 418 VGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477
Query: 440 GTAY--GVSPSEVELAAAKQMAIDLEEQN-RESANAKHKNSGSEIELETVITSNDGNDFK 496
G Y G +P++ + A +++++ + R K ++ + + S G D +
Sbjct: 478 GVDYSDGRTPTQNDHA---GYSVEVDGKILRPKMKVK-------VDPQLLELSKSGKDTE 527
Query: 497 RRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLT-----YEA 551
E + D FF LA C+T +P + ++T + T Y+
Sbjct: 528 --------EAKHVHD--------------FFLALAACNTIVPIVVDDTSDPTVKLMDYQG 565
Query: 552 ESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVERE-FKILNLLDFTSKRKRM 610
ESPDE A + AA +GF RT + I ER+ F +L L +F S RKRM
Sbjct: 566 ESPDEQALVYAAAAYGFMLIERTSGHIVIDIHG-------ERQRFNVLGLHEFDSDRKRM 618
Query: 611 SVIVRDEDGQILLLCKGADSIIFDRLSKNGRM-YEEATTKLLNEYGEAGLRTLALAYKQL 669
SVI+ D + + KGAD+ +F + ++ M AT L+ Y GLRTL + ++L
Sbjct: 619 SVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMREL 678
Query: 670 DESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDK 729
++SE+ W+ F+ A +++ R A L V+ +E +L ++GA+A+EDKLQ+GVP+ I+
Sbjct: 679 NDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIES 737
Query: 730 LAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEA-VKDNIL 788
L AG+K+WVLTGDK ETAI+IG++ LL M QI I + + +S K+ ++A V L
Sbjct: 738 LRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797
Query: 789 MQITNASQMIKL-ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK 847
++ SQ ALII+G +L Y L+ +++ LA +C+ V+CCRV+P
Sbjct: 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPL 857
Query: 848 QKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLS 897
QKA + LVK T TLAIGDGANDV MIQ AD+G+GISG EG Q V++
Sbjct: 858 QKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMA 907
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 229 bits (586), Expect = 6e-63
Identities = 105/387 (27%), Positives = 161/387 (41%), Gaps = 102/387 (26%)
Query: 521 DTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580
LL F A+C++ PE N Y+A P E A + A + GF
Sbjct: 387 PALLRFLLAAALCNSVTPEKNGW-----YQAGDPTEGALVEFAEKLGFSLDLS------- 434
Query: 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNG 640
+E E+ IL + F S+RKRMSVIV+ ++G+ +L KGA +I +R G
Sbjct: 435 ---------GLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIG 485
Query: 641 R---MYEEATTKLL---NEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREA 694
+ EE L E GLR LA+AYK+LD +E
Sbjct: 486 ELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDD------------------ 527
Query: 695 TLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754
D +E DL+ +G T +ED ++ V + I++L +AG+K+W++TGD +ETAI I
Sbjct: 528 ----EVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE 583
Query: 755 CSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEG 814
C + + AL+I+G
Sbjct: 584 CGIEAEAES---------------------------------------------ALVIDG 598
Query: 815 KTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDV 874
L +++ L E + + RVSP+QKA + +++ +G GDG ND
Sbjct: 599 AELDALSDEE----LAELVEELS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDA 651
Query: 875 GMIQEADIGIGISGVEGMQIVLSGHDM 901
++ AD+GI + G EG D+
Sbjct: 652 PALKAADVGIAMGG-EGTDAAKEAADI 677
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 187 bits (477), Expect = 9e-51
Identities = 83/355 (23%), Positives = 134/355 (37%), Gaps = 73/355 (20%)
Query: 103 VSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIV 162
+ L L V+ V K ED R + D+ VN R +V P + + GD+V
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWKE--IPAKDLVPGDVV 58
Query: 163 KVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTG 222
V+ + PAD + LS S C+V+ NL GE+N +K A++ T +G
Sbjct: 59 LVKSGETVPADGVLLSGS-----CFVDESNLTGESNPVLKTALKETQ-----------SG 102
Query: 223 TVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ 282
T+ + Y F G + +++ + + T V+ TG +++
Sbjct: 103 TITGDLVFAGTYVFGGTLI------------VVVTPTGILTTVGRIAVVVKTGFETR--- 147
Query: 283 NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVY 342
T SKR +E IFILF +L+ +++ + +
Sbjct: 148 --TPLQSKRDRLEN----FIFILFLLLLALAVFLYLFIRGWDPNS---IFKA-------- 190
Query: 343 FNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQ 402
L+ ALI+ ++P +L ++ + D +
Sbjct: 191 -------------LLRALIVLVIVVPPALPAAVTVALA------VGDARLAKK----GIL 227
Query: 403 ARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQ 457
R N EELG+VD + SDKTGTLT N+M + G S S V
Sbjct: 228 VRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSSLVACDNNYL 282
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 164 bits (418), Expect = 1e-41
Identities = 79/392 (20%), Positives = 140/392 (35%), Gaps = 74/392 (18%)
Query: 53 KYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLS--VTPLSPFSP-VSMLLPL 109
+ S K L + + + L+AALLS V ++L +
Sbjct: 54 LKKYGPNELPEEKKRSLLKKFLRQFKDPFIIL-LLVAALLSAFVGDWVDAGVDAIVILLV 112
Query: 110 AIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQF 169
++ + + + K++++ K V + +G F P ++ GDIV +E
Sbjct: 113 VVINALLGFVQEYRAEKALEALKKMSSPKAKV-LRDGKFVEIPASELVPGDIVLLEAGDV 171
Query: 170 FPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENP 229
PADL L SS V+ L GE+ K+A +
Sbjct: 172 VPADLRLLESSDL----EVDESALTGESLPVEKQA-------------------LPLTKS 208
Query: 230 NPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPS 289
+ L +D +L + + + G V+ TG +++ + A P+
Sbjct: 209 DAPL--------------GLDRDNMLFSGTTVVSG-RAKGIVVATGFETEFGKIARLLPT 253
Query: 290 KRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPL 349
K+ ++ + + + L L++++L+ V + + +
Sbjct: 254 KKE-VKTPLQRKLNKLGKFLLVLALVLGALVFVV------GLFRGGNGLLESFL------ 300
Query: 350 VPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLN 409
TAL L +P L + I L A + +D ++ R+ N
Sbjct: 301 --------TALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIV----------RSLNAI 342
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGT 441
E LG VD I SDKTGTLT N+M K + G
Sbjct: 343 ETLGSVDVICSDKTGTLTQNKMTVKKIYINGG 374
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 9e-25
Identities = 58/220 (26%), Positives = 82/220 (37%), Gaps = 61/220 (27%)
Query: 538 PELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597
+ + Y + P E A L +A G E+KI
Sbjct: 270 NSSSLVACDNNYLSGDPMEKALLKSAELVGKADKGNK-------------------EYKI 310
Query: 598 LNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEA 657
L++ F+S KRMSVIV DG LL KGA I +R + YEE E
Sbjct: 311 LDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCN----NYEEK----YLELARQ 362
Query: 658 GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVED 717
GLR LA A K+L++ DL +G ED
Sbjct: 363 GLRVLAFASKELED----------------------------------DLEFLGLITFED 388
Query: 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757
L+ + I++L AG+K+ ++TGD + TA I +
Sbjct: 389 PLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGI 428
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-23
Identities = 114/500 (22%), Positives = 172/500 (34%), Gaps = 135/500 (27%)
Query: 413 GQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANA 472
G++D DKTGTLT + +D GV
Sbjct: 446 GKIDVCCFDKTGTLTEDGLDLR---------GVQGLS----------------------- 473
Query: 473 KHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAI 532
+ +++ T EDS L K LA
Sbjct: 474 ---GNQEFLKIVT-------------------EDSSLKPSITHK------------ALAT 499
Query: 533 CHTAIPELNE------------ETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580
CH ++ +L E T E + DE+A T +
Sbjct: 500 CH-SLTKLEGKLVGDPLDKKMFEATGWTLEED--DESAE-------------PTSILAVV 543
Query: 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDED-GQILLLCKGADSIIFDRLSKN 639
R PP+ E I+ F+S +RMSVIV D KGA I S
Sbjct: 544 RTDDPPQ------ELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE 597
Query: 640 G--RMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLE 697
Y+E +L Y G R LALAYK+L + + Q R+A
Sbjct: 598 TVPSDYQE----VLKSYTREGYRVLALAYKELPKLTL----QKAQDLS------RDA--- 640
Query: 698 HVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757
+E +L +G E+ L+ + I +L +A ++ ++TGD TA+++ C +
Sbjct: 641 -----VESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGI 695
Query: 758 LRQGMKQICITALNSDSV-GKAAKEAVKDNILMQITNASQMIK-----LERDPHAAYALI 811
+ I A +S K V D+I T +E + Y L
Sbjct: 696 VNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLA 755
Query: 812 IEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGA 871
+ GK A L L + R++P QK + L+++ T GDGA
Sbjct: 756 MSGKAFAVLQAHS-PELLLRLLSHTT--VFARMAPDQKETLVELLQK-LDYTVGMCGDGA 811
Query: 872 NDVGMIQEADIGIGISGVEG 891
ND G +++AD+GI +S E
Sbjct: 812 NDCGALKQADVGISLSEAEA 831
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 95.6 bits (238), Expect = 5e-20
Identities = 120/497 (24%), Positives = 175/497 (35%), Gaps = 136/497 (27%)
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRES 469
E LG I SDKTGTLT NQM SV K +A+D
Sbjct: 284 ETLGCTTVICSDKTGTLTTNQM-----SVC----------------KVVALD-------- 314
Query: 470 ANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRI 529
S L N+F + E + D + L I
Sbjct: 315 --------PSSSSL---------NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATI 357
Query: 530 LAICHTAIPELNEETGNLTYEAES-PDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKG 588
A+C+ + + NE G YE EAA V + G + S R
Sbjct: 358 AALCNDSSLDFNERKG--VYEKVGEATEAALKVLVEKMGLPATKNGVS--SKRRPALGCN 413
Query: 589 QPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDR----LSKNGR--- 641
+FK L L+F+ RK MSV+ + G L + KGA + +R L+ +GR
Sbjct: 414 SVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFV-KGAPEGVLERCTHILNGDGRAVP 472
Query: 642 ----MYEEATTKLLNEYGEAGLRTLALAYKQ-LDESEYSAWNSEFQKAKSSIGADREATL 696
M + + LR LALA+K D E A
Sbjct: 473 LTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-------------DLLSDPANF 519
Query: 697 EHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACS 756
E + E DL +G + D + V I+K AG+++ ++TGD ETA I C
Sbjct: 520 EAI----ESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAI---C- 571
Query: 757 LLRQGMKQICITALNSDSVGKA--AKEAVKDNILMQITNASQMIKLERDPHAAYALIIEG 814
++I I + + D K+ +E ++ A Q
Sbjct: 572 ------RRIGIFSPDEDVTFKSFTGRE------FDEMGPAKQ------------------ 601
Query: 815 KTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDV 874
A ++V+ RV P K+ + L++E G+ GDG ND
Sbjct: 602 -----------------RAACRSAVLFSRVEPSHKSELVELLQE-QGEIVAMTGDGVNDA 643
Query: 875 GMIQEADIGIGI-SGVE 890
+++ADIGI + SG E
Sbjct: 644 PALKKADIGIAMGSGTE 660
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 79.8 bits (197), Expect = 4e-15
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 33/183 (18%)
Query: 589 QPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSII----FDRLSKNGRMYE 644
Q V E K++ + F S+RK MSV+V+ G+ KGA I+ RL NG
Sbjct: 466 QEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATP 525
Query: 645 ------EATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEH 698
+ ++ LRT+ LAY+ E+ +
Sbjct: 526 ISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYP------------------ 567
Query: 699 VSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758
K L L+G ++D L+ GV + + + +AG+ + ++TGD ++TA I C +L
Sbjct: 568 -----NKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGIL 622
Query: 759 RQG 761
G
Sbjct: 623 TFG 625
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 65.3 bits (160), Expect = 4e-13
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 20/109 (18%)
Query: 531 AICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590
A+C+ A NEE + P E+A LV A + G + +R RYP
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGD-PTESALLVFAEKLGIDVEE-------LRARYP----- 47
Query: 591 VEREFKILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSK 638
+ + F S+RKRMS + + E D L KGA I +R S
Sbjct: 48 ------RVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILERCST 90
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 8e-11
Identities = 99/503 (19%), Positives = 154/503 (30%), Gaps = 176/503 (34%)
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRES 469
E LG V+ I SDKTGTLT N M K + L A
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKI------WTSDGLHTMLNAV-------------- 358
Query: 470 ANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRI 529
S + VI D + GF +
Sbjct: 359 ---------SLNQFGEVIVDGD------VLHGFYTVAVSRI----------------LEA 387
Query: 530 LAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589
+C+ A + E L +P + A + +FG + R T V P
Sbjct: 388 GNLCNNA--KFRNEADTLL---GNPTDVALIELLMKFGLDDLRETYIRV---AEVP---- 435
Query: 590 PVEREFKILNLLDFTSKRKRMSV-IVRDEDGQILLLCKGADSIIFDR----LSKNGRMYE 644
F+S+RK M+V V +D + KGA + K+G+
Sbjct: 436 -------------FSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLT 482
Query: 645 ------EATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEH 698
+ + E AGLR +A A
Sbjct: 483 LTQQQRDVIQEEAAEMASAGLRVIAFASGPE----------------------------- 513
Query: 699 VSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758
+ L +G + D + GV + + L G++I ++TGD ETA++I
Sbjct: 514 -----KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA------ 562
Query: 759 RQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818
+++ + + S SV +A+ D L QI P A
Sbjct: 563 ----RRLGMPSKTSQSVSGEKLDAMDDQQLSQIV-----------PKVA----------- 596
Query: 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQ 878
+ R SP+ K + + +++ G GDG ND ++
Sbjct: 597 ---------------------VFARASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALK 634
Query: 879 EADIGIGISGVEGMQIVLSGHDM 901
ADIG+ + G G + DM
Sbjct: 635 LADIGVAM-GQTGTDVAKEAADM 656
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 3e-10
Identities = 125/632 (19%), Positives = 227/632 (35%), Gaps = 147/632 (23%)
Query: 294 IEKKMDKIIFILFAILVLISLI--SSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVP 351
+ +K+ K+ ILF I ++ ++I ++ F V KE +Y
Sbjct: 275 LHRKLSKLAVILFCIAIIFAIIVMAAHKFDVD-------------KEVAIY--------- 312
Query: 352 GLAHLVTALILYGYLIPISLYVSIEIVKFL-QAIFINQDISMYDDESGIPAQARTSNLNE 410
A+ L +IP SL + I + A +++ + R + E
Sbjct: 313 -------AICLAISIIPESLIAVLSITMAMGAANMSKRNVIV-----------RKLDALE 354
Query: 411 ELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESA 470
LG V+ I SDKTGT+T +M + + +G ++ID N + A
Sbjct: 355 ALGAVNDICSDKTGTITQGKM--IARQIWIPRFGT------------ISID----NSDDA 396
Query: 471 NAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRIL 530
++ + S I + + + I F+D L + + ++ ++D +
Sbjct: 397 FNPNEGNVSGIPRFSPYEYSHNEAADQDILK-EFKD-ELKEIDLPEDIDMDLFIKLLETA 454
Query: 531 AICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRT------QSSVFIRERY 584
A+ + A ++ T + P E A V A++F T +S+ +
Sbjct: 455 ALANIATVFKDDATDCWKAHGD-PTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSL 513
Query: 585 PPKGQ-PVEREFKILNLLDFTSKRKRMSVIVRDEDGQIL-LLCKGADSIIFDRLSK-NGR 641
+ P +F+ + F S+ KRM+ I D G+ + KGA I + S NG+
Sbjct: 514 SQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGK 573
Query: 642 MYEEATT----------KLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGAD 691
+ + + GLR LA A K D+++ + + + +
Sbjct: 574 DGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKAD--NNDDQLKNETLN---- 627
Query: 692 REATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINI 751
E DL +G + D + ++K QAG+ + +LTGD ETA I
Sbjct: 628 --------RATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAI 679
Query: 752 GFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALI 811
++ D + + D+++M + + E D A L+
Sbjct: 680 AQEVGIIP--------PNFIHDR------DEIMDSMVMTGSQFDALSDEEVDDLKALCLV 725
Query: 812 IEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGA 871
I R +P+ K + + + GDG
Sbjct: 726 I-----------------------------ARCAPQTKVKMIEALHRRKAFCAMT-GDGV 755
Query: 872 NDVGMIQEADIGI--GISGV----EGMQIVLS 897
ND ++ A++GI GI+G + IVLS
Sbjct: 756 NDSPSLKMANVGIAMGINGSDVAKDASDIVLS 787
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 2e-09
Identities = 73/301 (24%), Positives = 106/301 (35%), Gaps = 100/301 (33%)
Query: 602 DFTSKRKRMSVIVRDEDGQILLLCKGADSIIF---DRLSKNGRMYE---------EATTK 649
DF R+RMSV+V + L+CKGA I ++ NG + + T
Sbjct: 450 DFE--RRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTD 507
Query: 650 LLNEYGEAGLRTLALAYKQL--DESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDL 707
LN GLR +A+A K L E +Y +D E DL
Sbjct: 508 TLN---RQGLRVVAVATKYLPAREGDYQ-----------------------RAD--ESDL 539
Query: 708 ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICI 767
IL G A D ++ + L +G+ + +LTGD A ++C
Sbjct: 540 ILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVA--------------AKVC- 584
Query: 768 TALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKH 827
VG A E + + IE L DD
Sbjct: 585 -----HEVGLDAGEVLIGS------------------------DIE------TLSDDE-- 607
Query: 828 HFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887
L E ++ R++P K + L+K G +GDG ND ++ ADIGI +
Sbjct: 608 --LANLAERTTLF-ARLTPMHKERIVTLLK-REGHVVGFMGDGINDAPALRAADIGISVD 663
Query: 888 G 888
G
Sbjct: 664 G 664
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 2e-07
Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 33/168 (19%)
Query: 586 PKGQPVEREFKILNL-LDFTSKRKRMSVIVRDEDGQILLLCKGADS---IIFDRLSKNGR 641
P+ K+ L DF R+R+SV+V D GQ LL+CKGA + +
Sbjct: 431 PEIVKPAGYRKVDELPFDFV--RRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDT 488
Query: 642 MYE------EATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREAT 695
+ E L Y G R L +A +++ E +A+ S AD
Sbjct: 489 VRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGE--------SRAQYST-AD---- 535
Query: 696 LEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGD 743
E+DL++ G D ++ I L + G+ + VLTGD
Sbjct: 536 --------ERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 4e-07
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 833 AVECASVICCRVSPKQKA-LVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEG 891
A E + RVSP+QK +V L K+G GDG ND +++AD+GI +
Sbjct: 423 AKELGIDVFARVSPEQKLQIVEALQKKG--HIVAMTGDGVNDAPALKKADVGIAMGAKAA 480
Query: 892 MQIVLSGHDMRKCIQVFAFDIADCSLK-IAKFATF 925
IVL D+ I V A I +
Sbjct: 481 ADIVLLDDDLS-AI-VKAVKEGRKIFSNIKSNIFW 513
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 1e-05
Identities = 91/388 (23%), Positives = 153/388 (39%), Gaps = 99/388 (25%)
Query: 528 RILAICHTAIPELNEETGNLTYEAESPD--EAAFLVAAREFGFEFYRRTQSSVF-IRERY 584
RI +C+ A+ + +E + A + D E+A L + SV +RER
Sbjct: 397 RIAGLCNRAVFKAGQENVPILKRAVAGDASESALL--------KCIELCLGSVMEMRERN 448
Query: 585 PPKGQPVEREFKILNLLDFTSKRKRMSVIVRDED---GQILLLCKGADSIIFDRLSK--- 638
P K++ + F S K I +ED + LL+ KGA I +R S
Sbjct: 449 P----------KVVEI-PFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILI 497
Query: 639 NGRM------YEEATTKLLNEYGEAGLRTLALAYKQLDESEYS---AWNSEFQKAKSSIG 689
+G+ +EA E G G R L + L + ++ ++++ +
Sbjct: 498 HGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTD-- 555
Query: 690 ADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749
+L VG ++ D + VP + K AG+K+ ++TGD TA
Sbjct: 556 ----------------NLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAK 599
Query: 750 NIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYA 809
I K + I + +++V A + NI + N P A A
Sbjct: 600 AIA----------KGVGIISEGNETVEDI---AARLNIPVSQVN----------PRDAKA 636
Query: 810 LIIEGKTL----AYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGK 862
++ G L + L++ +K+H ++ R SP+QK ++ EG G
Sbjct: 637 CVVHGSDLKDMTSEQLDEILKYH--------TEIVFARTSPQQKLIIV----EGCQRQGA 684
Query: 863 TTLAIGDGANDVGMIQEADIGI--GISG 888
GDG ND +++ADIG+ GI+G
Sbjct: 685 IVAVTGDGVNDSPALKKADIGVAMGIAG 712
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 2e-05
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 32/158 (20%)
Query: 595 FKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFD---RLSKNGRM--YEEATTK 649
+K ++ + F R+R+SV+V + L+CKGA + G + E+
Sbjct: 406 WKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKS 465
Query: 650 LL----NEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEK 705
L E G+R +A+A K L E ++F K E+
Sbjct: 466 ELQDMTAEMNRQGIRVIAVATKTLKVGE-----ADFTKTD------------------EE 502
Query: 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGD 743
LI+ G D ++ + I L + G+ + VLTGD
Sbjct: 503 QLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGD 540
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 43/278 (15%), Positives = 93/278 (33%), Gaps = 88/278 (31%)
Query: 109 LAIVVGVSMAKEALEDWR---RFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVE 165
+ ++V ++ EA +++R K++ + + +G P +++ VGDIV ++
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 166 KDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVK 225
PAD + G V+ L GE+ K
Sbjct: 62 PGDRVPADGRIIE-----GSLEVDESALTGESLPVEK----------------------- 93
Query: 226 CENPNPSLY--TFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDS---KV 280
+ +++ T V + + V TG D+ K+
Sbjct: 94 --SRGDTVFAGTVVLS-------------------------GELKVIVTATGEDTELGKI 126
Query: 281 MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340
+ + S ++ +++ +DK+ ILV I L +I +
Sbjct: 127 ARLVEEAKSAKTPLQRLLDKLA----KILVPIVLALAILVFL------------------ 164
Query: 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIV 378
++F G + L + L+ P +L +++ +
Sbjct: 165 IWFFRGGDFLEALLRALAVLV---AACPEALPLAVPLA 199
|
Length = 222 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 8e-04
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 845 SPKQKALVTRLVKEGTGKT-TLAIGDGANDVGMIQEADIGIGISGVEGMQ----IVLSGH 899
S K K L+ L KEG T+A+GDGAND+ MI+ A +GI + +Q I ++
Sbjct: 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKADICINKK 210
Query: 900 DMRK 903
D+
Sbjct: 211 DLTD 214
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 928 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.97 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.85 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.49 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.44 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.12 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.1 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.06 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.04 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.03 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.02 | |
| PLN02887 | 580 | hydrolase family protein | 99.02 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.01 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.95 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.89 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.87 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.8 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.78 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.77 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.75 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.69 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.57 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.53 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.51 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.47 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.46 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.44 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.37 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.34 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.32 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.32 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.28 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.2 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.2 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.19 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.18 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.16 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.14 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.12 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.01 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.97 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.84 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.83 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.79 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.72 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.72 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.63 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.63 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.61 | |
| PLN02423 | 245 | phosphomannomutase | 97.49 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.34 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.17 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.13 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.04 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.01 | |
| PRK08238 | 479 | hypothetical protein; Validated | 96.94 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.88 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 96.88 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.86 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.79 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.67 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.63 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.59 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 96.58 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 96.55 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 96.38 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 96.31 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.23 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.21 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.15 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.15 | |
| PLN03017 | 366 | trehalose-phosphatase | 96.07 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.04 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.02 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.94 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 95.93 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.83 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.75 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.69 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 95.57 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 95.34 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.12 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.07 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 94.96 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 94.93 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 94.91 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 94.88 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 94.83 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 94.74 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 94.68 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 94.57 | |
| PRK06769 | 173 | hypothetical protein; Validated | 94.52 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.48 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.43 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 94.21 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 93.96 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 93.83 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.69 | |
| PLN02151 | 354 | trehalose-phosphatase | 93.63 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.46 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 93.38 | |
| PLN02811 | 220 | hydrolase | 93.19 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.07 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 93.01 | |
| PLN02940 | 382 | riboflavin kinase | 92.99 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 92.77 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.74 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 92.69 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 92.66 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 92.52 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.24 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 91.46 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 91.09 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 90.82 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 90.78 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 90.74 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 90.16 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 89.92 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 89.84 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 89.8 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 89.78 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 89.65 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 89.51 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 88.47 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 87.97 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 87.1 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 86.55 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 85.67 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 83.43 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 83.19 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 82.66 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 82.42 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 82.39 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 81.61 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 80.6 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 80.03 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-157 Score=1395.32 Aligned_cols=845 Identities=58% Similarity=0.953 Sum_probs=756.4
Q ss_pred CCCCeEEEeCCCCccccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCCcchhhhHHHH
Q 002391 33 QGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIV 112 (928)
Q Consensus 33 ~~~~r~~~~~~~~~~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~~~~~~~~~~~~~l~~v 112 (928)
++.+|++++|+|..+..+..+|..|.|+|+|||+++|||++||+||+|++|+|||+++|++++|++|++++++++||++|
T Consensus 11 ~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~v 90 (1151)
T KOG0206|consen 11 PGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFV 90 (1151)
T ss_pred CCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeee
Confidence 45689999999965555667999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeec
Q 002391 113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN 192 (928)
Q Consensus 113 l~~~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~ 192 (928)
+.++++||++|||+|+++|+++|+++++|+++++.+++..|++|+|||+|++..++.+|||++||+|++++|.|||+|++
T Consensus 91 l~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~n 170 (1151)
T KOG0206|consen 91 LGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETAN 170 (1151)
T ss_pred ehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEee
Confidence 99999999999999999999999999999954344999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEE
Q 002391 193 LDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (928)
Q Consensus 193 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv 272 (928)
||||||+|.|++...+......+.+..+.|.|+||+||.++|.|.|++..++...|++++|+++|||+|+||+|++|+|+
T Consensus 171 LDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv 250 (1151)
T KOG0206|consen 171 LDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVV 250 (1151)
T ss_pred cCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEE
Confidence 99999999999988886644455577899999999999999999999998887779999999999999999999999999
Q ss_pred EecCcceeeecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC---CccccCCCCCccccCCCCCc
Q 002391 273 FTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTP---QWWYLKPKETDVYFNPGKPL 349 (928)
Q Consensus 273 ~tG~~Tki~~~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 349 (928)
+||++||+|+|+..++.|++++++.+|+.+..++++++++|++++++..+|...... .+||+...+ ..
T Consensus 251 ~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~~ 321 (1151)
T KOG0206|consen 251 FTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSE---------AA 321 (1151)
T ss_pred EcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCch---------HH
Confidence 999999999999999999999999999999999999999999999999999875432 367764321 33
Q ss_pred hhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeec
Q 002391 350 VPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCN 429 (928)
Q Consensus 350 ~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n 429 (928)
...+..|++++++++.++|+|||+++++++++|+.+|++|.+||+++.+.++.+|+++++|+||||+||++|||||||+|
T Consensus 322 ~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N 401 (1151)
T KOG0206|consen 322 YAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQN 401 (1151)
T ss_pred HHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhh
Q 002391 430 QMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRL 509 (928)
Q Consensus 430 ~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (928)
.|+|++|+++|..|+...++.+.....+.+. . ... ...+++.|.|+++
T Consensus 402 ~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~------------------------------~-~~~-~~~~~~~f~~~~~ 449 (1151)
T KOG0206|consen 402 SMEFKKCSINGTSYGRNVTEVEAALAKRSGG------------------------------D-VNE-HKIKGFTFEDSRL 449 (1151)
T ss_pred eeeeecccccCcccccCCChhhcccCccccc------------------------------c-ccc-cccccceeccchh
Confidence 9999999999999998876543221110000 0 011 3456789999999
Q ss_pred cccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCC
Q 002391 510 MDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (928)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~ 589 (928)
+++.+...+......+|++++|+||++.++.+++++.+.|+++||||.||+++|+++|+.|..|++..+.+...+
T Consensus 450 ~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g----- 524 (1151)
T KOG0206|consen 450 VDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELG----- 524 (1151)
T ss_pred hccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccc-----
Confidence 999988888889999999999999999999876666999999999999999999999999999999999998433
Q ss_pred CceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEEeC
Q 002391 590 PVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQL 669 (928)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l 669 (928)
...+|++|+++||+|.|||||||||+|+|++.|||||||++|+++++.+++...+.+.+|+++||.+||||||+|||++
T Consensus 525 -~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l 603 (1151)
T KOG0206|consen 525 -VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYREL 603 (1151)
T ss_pred -cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhcc
Confidence 3689999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHH
Q 002391 670 DESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (928)
Q Consensus 670 ~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~ 749 (928)
+++||.+|+++|++|++++ .||+++++++++.+|+||+++|++||||+||+|||++|..|++||||+||+|||++|||+
T Consensus 604 ~e~eY~~w~~~~~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAi 682 (1151)
T KOG0206|consen 604 DEEEYEEWNERYNEAKTSL-TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAI 682 (1151)
T ss_pred CHHHHHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHH
Confidence 9999999999999999999 699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHccccccCceEEEEeCCCcchHHHHHH-HHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHH
Q 002391 750 NIGFACSLLRQGMKQICITALNSDSVGKAAK-EAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHH 828 (928)
Q Consensus 750 ~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~ 828 (928)
+||++|+++.++++++.++..+.+....... ....+.+.............+... ...+++|||+++.++++++.+..
T Consensus 683 NIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~ 761 (1151)
T KOG0206|consen 683 NIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKK 761 (1151)
T ss_pred HHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHH
Confidence 9999999999999999999877441111110 022223333322222111111111 47899999999999999988899
Q ss_pred HHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceecc----c
Q 002391 829 FLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRK----C 904 (928)
Q Consensus 829 ~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~----~ 904 (928)
|+.++..|++++|||++|.||+.+|+++++..+..|+|||||+||++|||+|||||||+|.||+||+++|||+.. +
T Consensus 762 Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL 841 (1151)
T KOG0206|consen 762 FLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFL 841 (1151)
T ss_pred HHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHH
Confidence 999999999999999999999999999987788999999999999999999999999999999999999999976 3
Q ss_pred ccccccccchhhHHHHhHHhhh
Q 002391 905 IQVFAFDIADCSLKIAKFATFC 926 (928)
Q Consensus 905 ~~~~~~~~~~~~~~~i~~~~~~ 926 (928)
-.+.+++..=++.|+.++..+|
T Consensus 842 ~rLLLVHGhW~Y~R~a~~ilyf 863 (1151)
T KOG0206|consen 842 ERLLLVHGHWSYIRLAKMILYF 863 (1151)
T ss_pred hhhheeecceeHHHHHHHHHHH
Confidence 3366777777888888877665
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-145 Score=1341.42 Aligned_cols=848 Identities=36% Similarity=0.580 Sum_probs=709.3
Q ss_pred CCeEEEeCCCCccccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhccc-CCCCCCcchhhhHHHHH
Q 002391 35 CPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVV 113 (928)
Q Consensus 35 ~~r~~~~~~~~~~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~-~~~~~~~~~~~~l~~vl 113 (928)
..|.|+.|++... +.+.+|++|.|+|+|||+|+|||++||+||+|++|+|||+++|+|++| +++.+++++++||++++
T Consensus 69 ~~r~i~~~~~~~~-~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl 147 (1178)
T PLN03190 69 DARLVYLNDPEKS-NERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVL 147 (1178)
T ss_pred CceEEEcCCCCcc-cccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHH
Confidence 4799999998432 334579999999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecC
Q 002391 114 GVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNL 193 (928)
Q Consensus 114 ~~~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~L 193 (928)
+++++++++||++|+++|+.+|+++++|+ ++|.+++++|++|+|||||+|++||.+|||++||+|++++|.|+|||++|
T Consensus 148 ~v~~ike~~Ed~~r~k~d~~~N~~~~~v~-~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~L 226 (1178)
T PLN03190 148 LVTAVKDAYEDWRRHRSDRIENNRLAWVL-VDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINL 226 (1178)
T ss_pred HHHHHHHHHHHHHHHHhHHhhcCcEEEEE-ECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEcccc
Confidence 99999999999999999999999999999 79999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEE
Q 002391 194 DGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIF 273 (928)
Q Consensus 194 tGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~ 273 (928)
||||+|+.|.+++.+... ......+.|.|+||.||+++|.|.|++.++|+..+++.+|+++|||.|+||+|++|+|+|
T Consensus 227 dGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVY 304 (1178)
T PLN03190 227 DGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVY 304 (1178)
T ss_pred CCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEE
Confidence 999999999988765321 122345789999999999999999999999999999999999999999999999999999
Q ss_pred ecCcceeeecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCC-------C
Q 002391 274 TGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNP-------G 346 (928)
Q Consensus 274 tG~~Tki~~~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 346 (928)
||+|||+++|..+++.|+|++|+.+|+++.+++++++++|++++++..+|........||+.+.....+... .
T Consensus 305 TG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 384 (1178)
T PLN03190 305 CGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYY 384 (1178)
T ss_pred echhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999887876543334455432110000000 0
Q ss_pred CCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCce
Q 002391 347 KPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTL 426 (928)
Q Consensus 347 ~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTL 426 (928)
......+..|+.+++++..+||+||++++++++++|+++|.+|.+||++..+.++.+|+++++|+||+|+|||+||||||
T Consensus 385 ~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTL 464 (1178)
T PLN03190 385 GWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTL 464 (1178)
T ss_pred hhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCcc
Confidence 00123356788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccc
Q 002391 427 TCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFED 506 (928)
Q Consensus 427 T~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (928)
|+|+|+|++|+++|..|+.+....+..... .. ....+ . ........+.+
T Consensus 465 T~N~M~fk~~~i~g~~y~~~~~~~~~~~~~---~~-------------------~~~~~-------~--~~~~~~~~~~~ 513 (1178)
T PLN03190 465 TENKMEFQCASIWGVDYSDGRTPTQNDHAG---YS-------------------VEVDG-------K--ILRPKMKVKVD 513 (1178)
T ss_pred ccceEEEEEEEECCEEcccccccchhhhhc---cc-------------------ccccc-------c--cccccccccCC
Confidence 999999999999999997542211000000 00 00000 0 00000000111
Q ss_pred hhhcccCC--CCCCChHHHHHHHHHHhhccceeecccCC--C---CceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEE
Q 002391 507 SRLMDGNW--LKEPNVDTLLLFFRILAICHTAIPELNEE--T---GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (928)
Q Consensus 507 ~~~~~~~~--~~~~~~~~~~~~~~~l~lc~~~~~~~~~~--~---~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~ 579 (928)
..+..... ...+....+.+|+.++++||++.+...++ . +.+.|+++||||.||+++|+++|+.+..|+++.+.
T Consensus 514 ~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~ 593 (1178)
T PLN03190 514 PQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 593 (1178)
T ss_pred HHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEE
Confidence 11111110 11122345788999999999999853211 1 24689999999999999999999999999999988
Q ss_pred EEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhccc-ccccHHHHHHHHHHHHhcC
Q 002391 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN-GRMYEEATTKLLNEYGEAG 658 (928)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~G 658 (928)
+...+ ....|++++++||+|+|||||||++++++++++||||||+.|+++|+.. +...++.+.+++++|+.+|
T Consensus 594 i~~~~------~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~G 667 (1178)
T PLN03190 594 IDIHG------ERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLG 667 (1178)
T ss_pred Eeecc------ceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcC
Confidence 86543 2678999999999999999999999988999999999999999999753 3346778899999999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEE
Q 002391 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (928)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~ 738 (928)
+|||++|||+++++|+++|...|.+|+.++ .+|+++++++.+.+|+||+++|+++++|++|++++++|+.|+++||++|
T Consensus 668 lRtL~lA~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~ 746 (1178)
T PLN03190 668 LRTLVVGMRELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVW 746 (1178)
T ss_pred CceEEEEEEeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEE
Confidence 999999999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred EEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhh----hhhhccCCCcCcEEEEEcC
Q 002391 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS----QMIKLERDPHAAYALIIEG 814 (928)
Q Consensus 739 mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~lvi~G 814 (928)
|+|||+.+||++||++|||+++++..+.++..+.+.+...+....... ....... .............+++++|
T Consensus 747 mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG 824 (1178)
T PLN03190 747 VLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMS--KKLTTVSGISQNTGGSSAAASDPVALIIDG 824 (1178)
T ss_pred EECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhh--hhccccccccccccccccccCCceEEEEEc
Confidence 999999999999999999999998888887665443332222111100 0000000 0000011123467899999
Q ss_pred chhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHH
Q 002391 815 KTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQI 894 (928)
Q Consensus 815 ~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a 894 (928)
.+|..++++++.+.|.+++..|+++||||++|+||+++|+.+|+..+++|+|||||+||++|||+||||||++|+||+||
T Consensus 825 ~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA 904 (1178)
T PLN03190 825 TSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQA 904 (1178)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHH
Confidence 99999998888889999999999999999999999999999998556899999999999999999999999999999999
Q ss_pred HHhCceecc----cccccccccchhhHHHHhHHhhh
Q 002391 895 VLSGHDMRK----CIQVFAFDIADCSLKIAKFATFC 926 (928)
Q Consensus 895 ~~aaD~v~~----~~~~~~~~~~~~~~~~i~~~~~~ 926 (928)
+++|||+.. +..+.+++..-++.|+.++++|+
T Consensus 905 ~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~ 940 (1178)
T PLN03190 905 VMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYN 940 (1178)
T ss_pred HHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999976 44477888888899998888875
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-136 Score=1285.21 Aligned_cols=829 Identities=49% Similarity=0.815 Sum_probs=698.8
Q ss_pred CCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhccc-CCCCCCcchhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 002391 54 YCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDK 132 (928)
Q Consensus 54 yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~-~~~~~~~~~~~~l~~vl~~~~~~~~~~d~~r~k~~~ 132 (928)
|++|.|+|+||++|+|+|++||+||+|++|+|||+++++|++| +++.+++++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7899999999999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred hhccceEEEEeCC-ceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCC
Q 002391 133 EVNARKVSVHVGN-GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPL 211 (928)
Q Consensus 133 ~~n~~~~~V~~r~-g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~ 211 (928)
.+|++.++|+ |+ |++++++|++|+|||||+|++||.||||++||++++++|.|+||||+|||||+|+.|++...+...
T Consensus 81 ~~n~~~~~v~-~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~ 159 (1057)
T TIGR01652 81 EVNNRLTEVL-EGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM 159 (1057)
T ss_pred HHhCcEEEEE-CCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhcc
Confidence 9999999999 75 899999999999999999999999999999999999999999999999999999999987766544
Q ss_pred CchhhhccCcEEEEecCCCCCcceEEEEEEECC-eeeecCCCCeeecccEEecCCeEEEEEEEecCcceeeecCCCCCCC
Q 002391 212 NEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDR-ELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSK 290 (928)
Q Consensus 212 ~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g-~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~~~~~~~~~k 290 (928)
.....+..+.|.|+|+.||+++|.|.|++.+++ ...|++.+|+++|||.|+||||++|+|+|||++||+++|...++.|
T Consensus 160 ~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k 239 (1057)
T TIGR01652 160 LDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSK 239 (1057)
T ss_pred CChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCccc
Confidence 455566778999999999999999999999988 7789999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccch
Q 002391 291 RSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPIS 370 (928)
Q Consensus 291 ~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~s 370 (928)
+|++|+.+|+++.+++.+++++|++++++..+|........||+..... ..+.....+..|++++++++.++|++
T Consensus 240 ~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~-----~~~~~~~~~~~~~~~~~L~~~~IPis 314 (1057)
T TIGR01652 240 RSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVS-----ERNAAANGFFSFLTFLILFSSLIPIS 314 (1057)
T ss_pred ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcc-----cccchhHHHHHHHHHHHHHhhhccee
Confidence 9999999999999999999999999999887776544344688643221 12223445668899999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEEEEcCcccCCCchHH
Q 002391 371 LYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEV 450 (928)
Q Consensus 371 L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~ 450 (928)
|+++++++++++++++++|.+||++...+++.+|+++++|+||+|+|||+|||||||+|+|+|++|+++|..|+...++.
T Consensus 315 L~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~ 394 (1057)
T TIGR01652 315 LYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEI 394 (1057)
T ss_pred eeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchH
Confidence 99999999999999999999999888888999999999999999999999999999999999999999999998654332
Q ss_pred HHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCCCCCChHHHHHHHHHH
Q 002391 451 ELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRIL 530 (928)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 530 (928)
........+... +. +.......+..++.++.+.+......+..+.+.+|+.++
T Consensus 395 ~~~~~~~~~~~~---------------~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 447 (1057)
T TIGR01652 395 KDAIRERLGSYV---------------EN------------ENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLAL 447 (1057)
T ss_pred HHHhhhcccccc---------------cc------------cccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHH
Confidence 111110000000 00 000000001133444444433222233445678999999
Q ss_pred hhccceeecc-cCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCce
Q 002391 531 AICHTAIPEL-NEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKR 609 (928)
Q Consensus 531 ~lc~~~~~~~-~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkr 609 (928)
++||++.+.. +++.+.+.|+++||+|.||+++|+.+|+.+.+|+.+.+.+.... .| ....|++++.+||+|+|||
T Consensus 448 ~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~--~~--~~~~~~il~~~pF~s~rKr 523 (1057)
T TIGR01652 448 ALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEM--HG--ETKEYEILNVLEFNSDRKR 523 (1057)
T ss_pred HhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEe--CC--CEEEEEEEEecccCCCCCe
Confidence 9999999875 22234588999999999999999999999999988754432211 11 2578999999999999999
Q ss_pred eEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhh
Q 002391 610 MSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIG 689 (928)
Q Consensus 610 msviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~ 689 (928)
||||++++++++++|+||||++|+++|...++...+.+.+++++|+.+|+|||++|||+++++|+++|.++|++|+.++
T Consensus 524 mSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~- 602 (1057)
T TIGR01652 524 MSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL- 602 (1057)
T ss_pred EEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-
Confidence 9999999888999999999999999998654456778899999999999999999999999999999999999999998
Q ss_pred hcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeC
Q 002391 690 ADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITA 769 (928)
Q Consensus 690 ~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~ 769 (928)
.+|++.+++..+.+|+||+|+|++|+||+||++|+++|+.|++|||++||+|||+++||++||++|||+..+.+.+.++.
T Consensus 603 ~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~ 682 (1057)
T TIGR01652 603 TDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITS 682 (1057)
T ss_pred hhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEec
Confidence 79999999999999999999999999999999999999999999999999999999999999999999998888887777
Q ss_pred CCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhH
Q 002391 770 LNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQK 849 (928)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK 849 (928)
.+.+..... +..+............ .......+.++++|++|+.+++++++.+|.+++..|+++||||++|+||
T Consensus 683 ~~~~~~~~~-----~~~i~~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK 756 (1057)
T TIGR01652 683 ESLDATRSV-----EAAIKFGLEGTSEEFN-NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQK 756 (1057)
T ss_pred CchhhhHHH-----HHHHHHHHHHHHHhhh-hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHH
Confidence 554332211 0111111111111110 1112456789999999999998888889999999999999999999999
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccc----ccccccccchhhHHHHhHHhh
Q 002391 850 ALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKC----IQVFAFDIADCSLKIAKFATF 925 (928)
Q Consensus 850 ~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~----~~~~~~~~~~~~~~~i~~~~~ 925 (928)
+++|+.+|+..|++|+|||||+||++||++||||||++|+|+.||+.+|||+..- ..+.+.+....+.|+-++++|
T Consensus 757 ~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~ 836 (1057)
T TIGR01652 757 ADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILY 836 (1057)
T ss_pred HHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 9999999984489999999999999999999999999999999999999999773 333334444457777777777
Q ss_pred h
Q 002391 926 C 926 (928)
Q Consensus 926 ~ 926 (928)
+
T Consensus 837 ~ 837 (1057)
T TIGR01652 837 F 837 (1057)
T ss_pred H
Confidence 5
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-125 Score=1024.86 Aligned_cols=777 Identities=33% Similarity=0.536 Sum_probs=681.9
Q ss_pred CeEEEeCCCCccccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhccc-CCCCCCcchhhhHHHHHH
Q 002391 36 PRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVVG 114 (928)
Q Consensus 36 ~r~~~~~~~~~~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~-~~~~~~~~~~~~l~~vl~ 114 (928)
.|++...... ..++.+|++|.++..||++++|+|..||+||+-+.|+|||+.++.|++| +......+++.||+|+++
T Consensus 63 ~rt~~~~~~~--~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~ 140 (1051)
T KOG0210|consen 63 GRTVNISFGP--HYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLT 140 (1051)
T ss_pred CceeecccCC--CcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHH
Confidence 4666665543 2356789999999999999999999999999999999999999999999 666778899999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhccceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCC
Q 002391 115 VSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (928)
Q Consensus 115 ~~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~Lt 194 (928)
+++++|+++|++|++.|+..|+.+++++.|+|.... ++++|+|||+|++++|++||||+++|.+++++|.|+|.|..||
T Consensus 141 itl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLD 219 (1051)
T KOG0210|consen 141 ITLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLD 219 (1051)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccC
Confidence 999999999999999999999999999977875554 9999999999999999999999999999999999999999999
Q ss_pred CCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCe--eeecCCCCeeecccEEecCCeEEEEEE
Q 002391 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRE--LYAIDPSQILLRDSKLRNTAHVYGSVI 272 (928)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~--~~~l~~~nil~rgs~l~nt~~~~gvVv 272 (928)
|||++|.|-|.+.++++.....+.+++ +..|.|+.+++.|.|++++... ..+|+.+|.||.++.+.. +.++|+|+
T Consensus 220 GETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs-~t~~gvVv 296 (1051)
T KOG0210|consen 220 GETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVAS-GTAIGVVV 296 (1051)
T ss_pred CcccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEec-CcEEEEEE
Confidence 999999999999999888887777776 8999999999999999999443 578999999999999984 55999999
Q ss_pred EecCcceeeecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhH
Q 002391 273 FTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (928)
Q Consensus 273 ~tG~~Tki~~~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (928)
|||.||+-++|...++.|-.-++.++|.+..++++++++++++....-++- ..||
T Consensus 297 YTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~------~~wy------------------- 351 (1051)
T KOG0210|consen 297 YTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG------SDWY------------------- 351 (1051)
T ss_pred EecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC------CchH-------------------
Confidence 999999999999999999999999999999999999999988776554432 3688
Q ss_pred HHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeE
Q 002391 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (928)
Q Consensus 353 ~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~ 432 (928)
..+++++++++.+||++|-+.+++++.+.+..+.+|.+. .+..+|++++.|+||+|+|+++|||||||+|+|+
T Consensus 352 -i~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~ 424 (1051)
T KOG0210|consen 352 -IYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEME 424 (1051)
T ss_pred -HHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccchhe
Confidence 588999999999999999999999999999999888754 6789999999999999999999999999999999
Q ss_pred EEEEEEcCcccCCCch-HHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcc
Q 002391 433 FLKCSVAGTAYGVSPS-EVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (928)
Q Consensus 433 v~~~~i~~~~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (928)
+++++.+-..|+.+.. +++.....-.... ++ ..++.
T Consensus 425 ~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~-------------~~---------------------~~~~~--------- 461 (1051)
T KOG0210|consen 425 FKKIHLGTVAYSAETMDEVSQHIQSLYTPG-------------RN---------------------KGKGA--------- 461 (1051)
T ss_pred eeeeeeeeeeccHhHHHHHHHHHHHhhCCC-------------cc---------------------ccccc---------
Confidence 9999999999976533 3332221100000 00 00000
Q ss_pred cCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCc
Q 002391 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPV 591 (928)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~ 591 (928)
......+.+..+++...++|+||++.|..++ ++...||+.||||.||+++.+..|..+..|+...+.++.+.. .
T Consensus 462 ~~~~k~~~s~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~-----~ 535 (1051)
T KOG0210|consen 462 LSRVKKDMSARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLD-----D 535 (1051)
T ss_pred chhhcCcccHHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCC-----c
Confidence 0112235566788999999999999998765 469999999999999999999999999999999999886632 3
Q ss_pred eeEEEEEEeecCCCCCceeEEEEEcC-CCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEEeCC
Q 002391 592 EREFKILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLD 670 (928)
Q Consensus 592 ~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~ 670 (928)
...|++|.+|||+|+.|||++|||++ .+++.+|.||||.+|......+ .++++....+|++|+|||++|+|.|+
T Consensus 536 ~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N-----dWleEE~gNMAREGLRtLVvakK~Ls 610 (1051)
T KOG0210|consen 536 ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN-----DWLEEECGNMAREGLRTLVVAKKVLS 610 (1051)
T ss_pred ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc-----hhhhhhhhhhhhhcceEEEEEecccC
Confidence 68999999999999999999999996 6999999999999998877654 58888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcHHHHHHHHHH-hhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHH
Q 002391 671 ESEYSAWNSEFQKAKSSIGADREATLEHVSD-MMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (928)
Q Consensus 671 ~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~-~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~ 749 (928)
++||++|...|+.|+-++ .||++++.++.+ .+|+||+++|++|+||+||++|+.+++.||+|||||||+|||+.+||+
T Consensus 611 ~~eye~Fe~~y~~A~lSi-~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ 689 (1051)
T KOG0210|consen 611 EEEYEAFEEAYNAAKLSI-SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAI 689 (1051)
T ss_pred HHHHHHHHHHHHhhhCcc-chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhhee
Confidence 999999999999999999 899999999887 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHccccccCceEEEEeCCCcchH-HHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHH
Q 002391 750 NIGFACSLLRQGMKQICITALNSDSV-GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHH 828 (928)
Q Consensus 750 ~ia~~~gii~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~ 828 (928)
.||++.+|+..++.+..+........ ..++. .+ ......+++|+|++|+.+++ ..+++
T Consensus 690 ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~----------------~l----R~k~~~aLvi~G~Sl~~cl~-yye~E 748 (1051)
T KOG0210|consen 690 CIAKSSRLFSRGQYIHVIRSVTSRGDAHNELN----------------NL----RRKTDCALVIDGESLEFCLK-YYEDE 748 (1051)
T ss_pred eeehhccceecCceEEEEEecCCchHHHHHHH----------------Hh----hcCCCcEEEEcCchHHHHHH-HHHHH
Confidence 99999999999988888876654321 11111 00 13356789999999998875 57888
Q ss_pred HHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceecc----c
Q 002391 829 FLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRK----C 904 (928)
Q Consensus 829 ~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~----~ 904 (928)
|.++.+.|.++||||++|.||+++++.+|++.++.|++||||.||++|||+||+|||+-|+||.||..||||... +
T Consensus 749 f~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv 828 (1051)
T KOG0210|consen 749 FIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHV 828 (1051)
T ss_pred HHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHH
Confidence 999999999999999999999999999999889999999999999999999999999999999999999999865 3
Q ss_pred ccccccccchhhHHHHhHHhhh
Q 002391 905 IQVFAFDIADCSLKIAKFATFC 926 (928)
Q Consensus 905 ~~~~~~~~~~~~~~~i~~~~~~ 926 (928)
-.+.+.+....+.|-.+.+||.
T Consensus 829 ~rLLl~HGR~SYkrsa~laqfV 850 (1051)
T KOG0210|consen 829 SRLLLWHGRNSYKRSAKLAQFV 850 (1051)
T ss_pred HHHhhccccchHHHHHHHHHHH
Confidence 3366788888899999999984
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-99 Score=924.97 Aligned_cols=639 Identities=30% Similarity=0.422 Sum_probs=519.6
Q ss_pred ccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhccc--CCCCCCcchhhhHHHHHHHHHHHHHHHHH
Q 002391 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (928)
Q Consensus 48 ~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~--~~~~~~~~~~~~l~~vl~~~~~~~~~~d~ 125 (928)
..++..||.|.+...+...++ +.++.||.+++++.++++++++++. +.+.. .....++++++++++..+++++
T Consensus 51 ~~r~~~~G~N~~~~~~~~~~~---~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~--~~~~~I~~~i~~n~~~g~~qe~ 125 (917)
T COG0474 51 KRRLKKYGPNELPEEKKRSLL---KKFLRQFKDPFIILLLVAALLSAFVGDWVDAG--VDAIVILLVVVINALLGFVQEY 125 (917)
T ss_pred HHHHhhcCCccccccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--cceeeehHHHHHHHHHHHHHHH
Confidence 456778999999977764443 7899999999999999999999874 22211 2223344556666777778888
Q ss_pred HHhhh---hhhhccceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcceee
Q 002391 126 RRFMQ---DKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVK 202 (928)
Q Consensus 126 ~r~k~---~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K 202 (928)
+..++ .+.+.+.+++|+ |||++++|+|++|+|||||+|++||.||||++||++++ .+||||+|||||.|+.|
T Consensus 126 ~a~~~l~~lk~~~~~~~~V~-R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K 200 (917)
T COG0474 126 RAEKALEALKKMSSPKAKVL-RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK 200 (917)
T ss_pred HHHHHHHHHHhhccCceEEE-eCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhc
Confidence 87554 566667899999 89999999999999999999999999999999999774 59999999999999999
Q ss_pred ecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcceeee
Q 002391 203 RAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ 282 (928)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~~ 282 (928)
.+..... .+.|. .++..|++++||.++++. +.|+|++||.+|++++
T Consensus 201 ~~~~~~~----------------~~~~~-----------------~~d~~n~l~sGt~V~~G~-~~giVvaTG~~T~~G~ 246 (917)
T COG0474 201 QALPLTK----------------SDAPL-----------------GLDRDNMLFSGTTVVSGR-AKGIVVATGFETEFGK 246 (917)
T ss_pred ccccccc----------------ccccc-----------------cCCccceEEeCCEEEcce-EEEEEEEEcCccHHHH
Confidence 9865441 01111 056789999999998644 9999999999999988
Q ss_pred cCCCCC---CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHH
Q 002391 283 NATTSP---SKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTA 359 (928)
Q Consensus 283 ~~~~~~---~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (928)
++...+ ...+++++.++++..+++.+.++++++.++...+... . .| ...|+++
T Consensus 247 ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~-~---~~--------------------~~~~~~~ 302 (917)
T COG0474 247 IARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGG-N---GL--------------------LESFLTA 302 (917)
T ss_pred HHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-c---cH--------------------HHHHHHH
Confidence 776432 4679999999999999999999999988887633211 1 13 3689999
Q ss_pred HHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEEEEc
Q 002391 360 LILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVA 439 (928)
Q Consensus 360 i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~i~ 439 (928)
+++++.++|++||+.+++++.+++.+| +++++++|+++++|+||++++||||||||||+|+|+|.+++++
T Consensus 303 v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~ 372 (917)
T COG0474 303 LALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYIN 372 (917)
T ss_pred HHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeC
Confidence 999999999999999999999999999 8899999999999999999999999999999999999999988
Q ss_pred CcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCCCCCC
Q 002391 440 GTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPN 519 (928)
Q Consensus 440 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (928)
+. +.+.+. .....
T Consensus 373 ~~--~~~~~~-----------------------------------------------------------------~~~~~ 385 (917)
T COG0474 373 GG--GKDIDD-----------------------------------------------------------------KDLKD 385 (917)
T ss_pred CC--cccccc-----------------------------------------------------------------ccccc
Confidence 51 000000 00011
Q ss_pred hHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEE
Q 002391 520 VDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILN 599 (928)
Q Consensus 520 ~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~ 599 (928)
.....+++..+++||++.+..+ . .+..+||+|.||++++++.|+.+ .. .. ....|++++
T Consensus 386 ~~~~~~~l~~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~~--~~-------------~~~~~~~~~ 444 (917)
T COG0474 386 SPALLRFLLAAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-DL--SG-------------LEVEYPILA 444 (917)
T ss_pred chHHHHHHHHHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-CH--HH-------------HhhhcceeE
Confidence 2334478999999999987654 2 67789999999999999999754 10 00 245678899
Q ss_pred eecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcc------cccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHH
Q 002391 600 LLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSK------NGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESE 673 (928)
Q Consensus 600 ~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e 673 (928)
.+||+|+|||||+|++..++++++||||||++|+++|+. ..++.++.+....++|+.+|||||++|||.++..+
T Consensus 445 ~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~ 524 (917)
T COG0474 445 EIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAE 524 (917)
T ss_pred EecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccc
Confidence 999999999999999987788999999999999999985 22345678889999999999999999999776543
Q ss_pred HHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHH
Q 002391 674 YSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF 753 (928)
Q Consensus 674 ~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~ 753 (928)
.. . .. +.+|+||+|+|+++|+||+|++++++|+.|+++||++||+|||+++||++||+
T Consensus 525 ~~----------------~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~ 582 (917)
T COG0474 525 KD----------------D-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAK 582 (917)
T ss_pred cc----------------c-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHH
Confidence 11 1 01 57789999999999999999999999999999999999999999999999999
Q ss_pred HccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhh
Q 002391 754 ACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA 833 (928)
Q Consensus 754 ~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~ 833 (928)
+||+..+... .++++|.+|..+.++++.+...
T Consensus 583 ~~Gi~~~~~~---------------------------------------------~~vi~G~el~~l~~~el~~~~~--- 614 (917)
T COG0474 583 ECGIEAEAES---------------------------------------------ALVIDGAELDALSDEELAELVE--- 614 (917)
T ss_pred HcCCCCCCCc---------------------------------------------eeEeehHHhhhcCHHHHHHHhh---
Confidence 9998543210 4689999999888875554444
Q ss_pred hccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc----ccc
Q 002391 834 VECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ----VFA 909 (928)
Q Consensus 834 ~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~----~~~ 909 (928)
.++ ||||++|+||.++|+.+|+ .|++|+|+|||+||+||||+|||||||++...+-|+.+||+++..+. +.+
T Consensus 615 -~~~--VfARvsP~qK~~IV~~lq~-~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~a 690 (917)
T COG0474 615 -ELS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLA 690 (917)
T ss_pred -hCc--EEEEcCHHHHHHHHHHHHh-CCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHH
Confidence 344 9999999999999999999 69999999999999999999999999975333338899999988766 347
Q ss_pred cccchh-hHHHHhHHhhh
Q 002391 910 FDIADC-SLKIAKFATFC 926 (928)
Q Consensus 910 ~~~~~~-~~~~i~~~~~~ 926 (928)
++.+|+ +.++.||++|.
T Consensus 691 v~eGR~~~~ni~k~i~~~ 708 (917)
T COG0474 691 VVEGRRVYVNIKKFILYL 708 (917)
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 788888 66666776653
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-94 Score=804.02 Aligned_cols=684 Identities=23% Similarity=0.278 Sum_probs=522.2
Q ss_pred ccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 002391 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127 (928)
Q Consensus 48 ~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~~~~~~~~~~~~~l~~vl~~~~~~~~~~d~~r 127 (928)
..|++.||.|.+....-..++ +.+++||.++....+|++++++++. .++...+.+.+++++++...++++|+.
T Consensus 30 ~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfvl----~~~~e~~vI~liiv~nvtVG~~QEy~a 102 (972)
T KOG0202|consen 30 TRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFVL----ADFDEPFVITLIIVINVTVGFVQEYNA 102 (972)
T ss_pred HHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHHH----Hhcccceeeeeeeeeeeeeeeeeehhh
Confidence 457789999999988766655 9999999999999999999999984 444444445556677778889999999
Q ss_pred hhhhhhhcc---ceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcceeeec
Q 002391 128 FMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRA 204 (928)
Q Consensus 128 ~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~ 204 (928)
.|+.+++++ ..++|+ |+|+.+.+++++|+|||||.|+-||+||||++|++..+ ..||||+|||||.|+.|..
T Consensus 103 EkalEaLk~l~p~~~~V~-R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~t 177 (972)
T KOG0202|consen 103 EKALEALKELVPPMAHVL-RSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKDT 177 (972)
T ss_pred HHHHHHHHhcCCccceEE-ecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCcccccccC
Confidence 999877765 789999 89999999999999999999999999999999999886 8899999999999999976
Q ss_pred ccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcceeeec-
Q 002391 205 MEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQN- 283 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~~~- 283 (928)
...... + +++..+.....|+||.+..|+ +.|+|+.||.+|.++..
T Consensus 178 ~~v~~~--~-----------~~~~~dk~NiaFsGT~V~~G~---------------------a~GIVi~TG~nTeiG~I~ 223 (972)
T KOG0202|consen 178 DAVPKD--E-----------NADVQDKKNIAFSGTLVVAGR---------------------AKGIVIGTGLNTEIGKIF 223 (972)
T ss_pred ccccCC--C-----------CCccccceeeEeecceeecCc---------------------eeEEEEeccccchHHHHH
Confidence 543210 0 000111222446666666665 99999999999976543
Q ss_pred --CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHH
Q 002391 284 --ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIG-FAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTAL 360 (928)
Q Consensus 284 --~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 360 (928)
....+..+||+|+++|.+...+.-++.++|+...++ .+.+....+...|+ ...+..|..++
T Consensus 224 ~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~f----------------k~~~~~f~IaV 287 (972)
T KOG0202|consen 224 KMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWF----------------KGALYYFKIAV 287 (972)
T ss_pred HHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccch----------------hchhhhhhHHH
Confidence 234466689999999999999986666666655554 22222111112333 23356888899
Q ss_pred HHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEEEEcC
Q 002391 361 ILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAG 440 (928)
Q Consensus 361 ~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~i~~ 440 (928)
.+.+.+||.+||+.+++..+++..+| ++++++||.+..+|+||.+++||||||||||+|+|.+.++++.+
T Consensus 288 sLAVAAIPEGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~ 357 (972)
T KOG0202|consen 288 SLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPD 357 (972)
T ss_pred HHHHHhccCCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecc
Confidence 99999999999999999999999998 89999999999999999999999999999999999999999877
Q ss_pred cccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCCCCCCh
Q 002391 441 TAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNV 520 (928)
Q Consensus 441 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (928)
..++.. ++ +...+ ......+-.+.+..- ........
T Consensus 358 ~~~~~~-~~-------------------------------f~~tg---------~ty~~~g~v~~~~~~---~~~~~~~~ 393 (972)
T KOG0202|consen 358 GGTATV-DE-------------------------------FNPTG---------TTYSPEGEVFKDGLY---EKDKAGDN 393 (972)
T ss_pred cccccc-cc-------------------------------cccCC---------ceeCCCCceEecCcc---cccccccc
Confidence 654332 00 00000 000000111111100 00122345
Q ss_pred HHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEe
Q 002391 521 DTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNL 600 (928)
Q Consensus 521 ~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~ 600 (928)
+.+.++..+.++||.+...+++. +.++. .+.|.|.||..+|+++|+.-...... .-.+ .+.+.+.....++....
T Consensus 394 ~~l~~l~~i~~lCNda~v~~~~~-~~~~~-~G~pTE~AL~vlaeKm~l~~~~~~~~--s~~~-~~~c~~~~~~~~~~~~e 468 (972)
T KOG0202|consen 394 DLLQELAEICALCNDATVEYNDA-DCYEK-VGEPTEGALIVLAEKMGLPGTRSTNL--SNEE-ASACNRVYSRLFKKIAE 468 (972)
T ss_pred HHHHHHHHHHHhhhhhhhhcCch-hhHHh-cCCchHHHHHHHHHHcCCCcchhhcc--cccc-cccchhHHHHhhhheeE
Confidence 67889999999999998776653 22222 38999999999999999764331110 0001 22233334556777899
Q ss_pred ecCCCCCceeEEEEEcCCCc--EEEEEccchhhhHHhhcc----c-------ccccHHHHHHHHHHHHhcCCeEEEEEEE
Q 002391 601 LDFTSKRKRMSVIVRDEDGQ--ILLLCKGADSIIFDRLSK----N-------GRMYEEATTKLLNEYGEAGLRTLALAYK 667 (928)
Q Consensus 601 ~~F~s~rkrmsviv~~~~~~--~~l~~KGa~~~i~~~~~~----~-------~~~~~~~~~~~~~~~~~~Glr~l~~A~k 667 (928)
+||+|+||+|||.+.++.+. +.+|+|||+|.|+++|+. . .+..++.+.+...+|+.+|||+|++|++
T Consensus 469 lpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~ 548 (972)
T KOG0202|consen 469 LPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASK 548 (972)
T ss_pred eecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEcc
Confidence 99999999999999986664 899999999999999954 1 1235678888999999999999999999
Q ss_pred eCCH-H--HHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCc
Q 002391 668 QLDE-S--EYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (928)
Q Consensus 668 ~l~~-~--e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~ 744 (928)
+.+. . +-..|+. .+| ...|.||+|+|++|+.||+|++++++|+.|+++||+|.|+|||+
T Consensus 549 ~~~~~~~~~~~l~~~----------s~~--------~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~ 610 (972)
T KOG0202|consen 549 DSPGQVPDDQDLNDT----------SNR--------ATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDN 610 (972)
T ss_pred CCcccChhhhhhccc----------ccc--------cccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCC
Confidence 8764 1 1111110 122 56789999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHH
Q 002391 745 METAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDD 824 (928)
Q Consensus 745 ~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~ 824 (928)
++||.+||+++|+...+.+ -...+.+|.+++.+.+++
T Consensus 611 ~~TA~AI~r~iGi~~~~ed-------------------------------------------~~~~~~TG~efD~ls~~~ 647 (972)
T KOG0202|consen 611 KETAEAIAREIGIFSEDED-------------------------------------------VSSMALTGSEFDDLSDEE 647 (972)
T ss_pred HHHHHHHHHHhCCCcCCcc-------------------------------------------ccccccchhhhhcCCHHH
Confidence 9999999999998765432 112367788887766655
Q ss_pred HHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEec--CCchhHHHHhCceec
Q 002391 825 MKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQIVLSGHDMR 902 (928)
Q Consensus 825 ~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~--g~e~~~a~~aaD~v~ 902 (928)
+.+... ...+|+|++|++|.++|+.||+ .|++|+|.|||.||+|+||.|||||||+ |++. ||+|||+|+
T Consensus 648 ~~~~~~------~~~vFaR~~P~HK~kIVeaLq~-~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV--aKeAsDMVL 718 (972)
T KOG0202|consen 648 LDDAVR------RVLVFARAEPQHKLKIVEALQS-RGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV--AKEASDMVL 718 (972)
T ss_pred HHHHhh------cceEEEecCchhHHHHHHHHHh-cCCEEEecCCCccchhhhhhcccceeecCCccHh--hHhhhhcEE
Confidence 543332 3569999999999999999998 8999999999999999999999999995 6777 999999999
Q ss_pred cccc----ccccccchhhHHHHhH
Q 002391 903 KCIQ----VFAFDIADCSLKIAKF 922 (928)
Q Consensus 903 ~~~~----~~~~~~~~~~~~~i~~ 922 (928)
..++ +.|++.+|..-++||-
T Consensus 719 ~DDnFstIvaAVEEGr~IynNik~ 742 (972)
T KOG0202|consen 719 ADDNFSTIVAAVEEGRAIYNNIKN 742 (972)
T ss_pred ecCcHHHHHHHHHHhHHHHHHHHH
Confidence 9877 5689999996666654
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-91 Score=865.21 Aligned_cols=712 Identities=19% Similarity=0.208 Sum_probs=507.5
Q ss_pred cccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCCcchhhhHHHHHHHHHHHHHHHHHH
Q 002391 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126 (928)
Q Consensus 47 ~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~~~~~~~~~~~~~l~~vl~~~~~~~~~~d~~ 126 (928)
..+|+++||.|.++.++...++ +.|++||.+++.++++++++++++. ..|. ..+.++++++++++..++++++
T Consensus 32 a~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~~---~~~~-~~~iIl~vv~in~~i~~~QE~~ 104 (1053)
T TIGR01523 32 AQHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFAM---HDWI-EGGVISAIIALNILIGFIQEYK 104 (1053)
T ss_pred HHHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHH---hhHH-HHHHHHhHHHHHHHHHHHHHHH
Confidence 3457889999999988765544 8899999999999999999999984 3444 4445667778899999999999
Q ss_pred Hhhhhhhhc---cceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcceeee
Q 002391 127 RFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (928)
Q Consensus 127 r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~ 203 (928)
..++...+. ..+++|+ |||++++|++++|+|||||.|++||.||||++|+++++ +.||||+|||||.|+.|.
T Consensus 105 aekal~aL~~l~~~~~~Vi-Rdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K~ 179 (1053)
T TIGR01523 105 AEKTMDSLKNLASPMAHVI-RNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIKD 179 (1053)
T ss_pred HHHHHHHHhccCCCceEEE-eCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceecc
Confidence 999876655 4789999 89999999999999999999999999999999999765 999999999999999998
Q ss_pred cccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcceeeec
Q 002391 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQN 283 (928)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~~~ 283 (928)
+...... . ......+..|++|+||.+.. |.+.|+|++||.+|.+++.
T Consensus 180 ~~~~~~~---~-----------------------------~~~~~~d~~n~lf~GT~V~~-G~g~~vVvatG~~T~~GkI 226 (1053)
T TIGR01523 180 AHATFGK---E-----------------------------EDTPIGDRINLAFSSSAVTK-GRAKGICIATALNSEIGAI 226 (1053)
T ss_pred ccccccc---c-----------------------------ccCCcccCCCccccCceEEe-eeEEEEEEEecCccHHHHH
Confidence 7421100 0 00001123445555555542 4499999999999977654
Q ss_pred CCC---CC-----------------------------------CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 002391 284 ATT---SP-----------------------------------SKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKIN 325 (928)
Q Consensus 284 ~~~---~~-----------------------------------~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~ 325 (928)
... .. ..+||+|+++++++.+++.+.++++++.++...+ .
T Consensus 227 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~--~ 304 (1053)
T TIGR01523 227 AAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF--D 304 (1053)
T ss_pred HHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--h
Confidence 331 10 0149999999999999888888887776654221 0
Q ss_pred ccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEec
Q 002391 326 YQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQART 405 (928)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~ 405 (928)
.| ...+.+++.+++.++|++||+.++++..+++.+| +++++++|+
T Consensus 305 -----~~--------------------~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM----------ak~~~lVr~ 349 (1053)
T TIGR01523 305 -----VD--------------------KEVAIYAICLAISIIPESLIAVLSITMAMGAANM----------SKRNVIVRK 349 (1053)
T ss_pred -----hh--------------------HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----------HhcCCEecc
Confidence 01 1355678899999999999999999999999999 889999999
Q ss_pred ccchhhcccceEEEecCCCceeeceeEEEEEEEcCc-ccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchh
Q 002391 406 SNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGT-AYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELE 484 (928)
Q Consensus 406 ~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~i~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (928)
++.+|+||.+++||+|||||||+|+|+|+++++++. .|.....+.. .....+. ..... ...+...
T Consensus 350 L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~--~~~~~g~-~~~~~--------~~~~~~~--- 415 (1053)
T TIGR01523 350 LDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDA--FNPNEGN-VSGIP--------RFSPYEY--- 415 (1053)
T ss_pred chhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCC--CCCcccc-ccccc--------ccccccc---
Confidence 999999999999999999999999999999998752 2211000000 0000000 00000 0000000
Q ss_pred hhcccCCCCccccccCCCcccchhhcccCC-CCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHH
Q 002391 485 TVITSNDGNDFKRRIKGFNFEDSRLMDGNW-LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAA 563 (928)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a 563 (928)
+ ......+.+.-.......... .....+..+.+++.+.++||++....++..+.. ...++|+|.||+.+|
T Consensus 416 ----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~-~~~GdptE~ALl~~a 486 (1053)
T TIGR01523 416 ----S----HNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCW-KAHGDPTEIAIHVFA 486 (1053)
T ss_pred ----c----ccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCce-eeCcCccHHHHHHHH
Confidence 0 000000000000000000000 000012346678899999998876433222221 135899999999999
Q ss_pred HHCCcEEEEE---------cCCe-EEEEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCC-cEEEEEccchhhh
Q 002391 564 REFGFEFYRR---------TQSS-VFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDG-QILLLCKGADSII 632 (928)
Q Consensus 564 ~~~g~~~~~~---------~~~~-~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~l~~KGa~~~i 632 (928)
.++|+..... .+.. ..+... ..+.....|++++.+||+|+|||||++++++++ .+++|+|||||.|
T Consensus 487 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~i 563 (1053)
T TIGR01523 487 KKFDLPHNALTGEEDLLKSNENDQSSLSQH---NEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERI 563 (1053)
T ss_pred HHcCCCcccccchhhhhhhccccccccccc---cccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHH
Confidence 9999743100 0000 000000 000013568999999999999999999997654 5899999999999
Q ss_pred HHhhccc-----------ccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHH
Q 002391 633 FDRLSKN-----------GRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSD 701 (928)
Q Consensus 633 ~~~~~~~-----------~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~ 701 (928)
+++|+.. .++.++.+.+++++|+.+|+|||++|||+++.+++..+ .+.. .. .+| +
T Consensus 564 l~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~-~~~--------~ 629 (1053)
T TIGR01523 564 IECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ET-LNR--------A 629 (1053)
T ss_pred HHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cc-cch--------h
Confidence 9999741 12235677888999999999999999999987554221 1100 00 112 3
Q ss_pred hhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHH
Q 002391 702 MMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKE 781 (928)
Q Consensus 702 ~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~ 781 (928)
.+|+||+|+|+++++|++|++++++|+.|+++||+|||+|||++.||.+||++|||+..+.. . ...
T Consensus 630 ~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~--~-~~~----------- 695 (1053)
T TIGR01523 630 TAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI--H-DRD----------- 695 (1053)
T ss_pred hhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc--c-ccc-----------
Confidence 57899999999999999999999999999999999999999999999999999999864311 0 000
Q ss_pred HHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCC
Q 002391 782 AVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG 861 (928)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g 861 (928)
......+++|.+++.+.++++.+.. ....||||++|+||.++|+.+|+ .|
T Consensus 696 -----------------------~~~~~~vitG~~l~~l~~~~l~~~~------~~~~V~ar~sP~~K~~iV~~lq~-~g 745 (1053)
T TIGR01523 696 -----------------------EIMDSMVMTGSQFDALSDEEVDDLK------ALCLVIARCAPQTKVKMIEALHR-RK 745 (1053)
T ss_pred -----------------------ccccceeeehHHhhhcCHHHHHHHh------hcCeEEEecCHHHHHHHHHHHHh-cC
Confidence 0012368999999887665544332 23469999999999999999998 79
Q ss_pred CEEEEEcCCcccHHHHHhCCccEEec--CCchhHHHHhCceeccccc----ccccccchhhHHHH-hHHhhh
Q 002391 862 KTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQIVLSGHDMRKCIQ----VFAFDIADCSLKIA-KFATFC 926 (928)
Q Consensus 862 ~~vlaiGDG~ND~~mL~~AdvGIa~~--g~e~~~a~~aaD~v~~~~~----~~~~~~~~~~~~~i-~~~~~~ 926 (928)
++|+|+|||.||+|||++|||||||+ |++. |+++||+++..++ +.++++||++.++| ||++|+
T Consensus 746 ~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~ 815 (1053)
T TIGR01523 746 AFCAMTGDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHL 815 (1053)
T ss_pred CeeEEeCCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999995 4555 9999999988554 44789999955544 555553
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-91 Score=870.56 Aligned_cols=675 Identities=20% Similarity=0.253 Sum_probs=518.7
Q ss_pred cccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhccc--CC-------CCCCcchhhhHHHHHHHHH
Q 002391 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LS-------PFSPVSMLLPLAIVVGVSM 117 (928)
Q Consensus 47 ~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~--~~-------~~~~~~~~~~l~~vl~~~~ 117 (928)
..+|+.+||.|.++.++.+.++ +.|++||.+++++.++++++++++. +. ....+...+++++++++++
T Consensus 42 ~~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 118 (997)
T TIGR01106 42 AAEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITG 118 (997)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHH
Confidence 3557889999999987766554 8899999999999999999997753 10 0123344556788889999
Q ss_pred HHHHHHHHHHhhhhhhhcc---ceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCC
Q 002391 118 AKEALEDWRRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (928)
Q Consensus 118 ~~~~~~d~~r~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~Lt 194 (928)
+..+++++++++.++.+++ .+++|+ |||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+||
T Consensus 119 ~i~~~qe~ka~~~l~~l~~~~~~~~~Vi-Rdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LT 193 (997)
T TIGR01106 119 CFSYYQEAKSSKIMESFKNMVPQQALVI-RDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLT 193 (997)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEE-ECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccC
Confidence 9999999999999887765 589999 89999999999999999999999999999999999553 899999999
Q ss_pred CCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEe
Q 002391 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFT 274 (928)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~t 274 (928)
|||.|+.|.+++.. ..|++..|++++||.+. .|++.|+|++|
T Consensus 194 GES~pv~K~~~~~~-------------------------------------~~~~~~~n~l~~Gt~v~-~G~~~~~V~~t 235 (997)
T TIGR01106 194 GESEPQTRSPEFTH-------------------------------------ENPLETRNIAFFSTNCV-EGTARGIVVNT 235 (997)
T ss_pred CCCCceeccCCCcc-------------------------------------cCccccCCeEEeccEee-eeeEEEEEEEc
Confidence 99999999875321 11345566777776665 35699999999
Q ss_pred cCcceeeecCC---CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchh
Q 002391 275 GHDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVP 351 (928)
Q Consensus 275 G~~Tki~~~~~---~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (928)
|.+|+++++.. ..+.+++|+++.++++...+..+.++++++.++++.+... .|
T Consensus 236 G~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------------------- 291 (997)
T TIGR01106 236 GDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY-----TW------------------- 291 (997)
T ss_pred cccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CH-------------------
Confidence 99999887665 4566789999999999999988888877776665533211 12
Q ss_pred HHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeecee
Q 002391 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQM 431 (928)
Q Consensus 352 ~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m 431 (928)
...+.+++.+++.+||++|+++++++...++.++ +++++++|+++.+|+||++++||||||||||+|+|
T Consensus 292 -~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m 360 (997)
T TIGR01106 292 -LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRM 360 (997)
T ss_pred -HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCceecCce
Confidence 2356677888889999999999999999999988 78899999999999999999999999999999999
Q ss_pred EEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcc
Q 002391 432 DFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (928)
Q Consensus 432 ~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (928)
+|.++++++..|..+..+. ..+..+
T Consensus 361 ~v~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~------- 385 (997)
T TIGR01106 361 TVAHMWFDNQIHEADTTED------------------------------------------------QSGVSF------- 385 (997)
T ss_pred EEEEEEECCeEEecCCccC------------------------------------------------CCCccC-------
Confidence 9999998877653221000 000000
Q ss_pred cCCCCCCChHHHHHHHHHHhhccceeecccCCC--CceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCC
Q 002391 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEET--GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (928)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~--~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~ 589 (928)
.........++.++++||++....+... -.-.+..++|+|.||++++...+.....
T Consensus 386 -----~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~----------------- 443 (997)
T TIGR01106 386 -----DKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME----------------- 443 (997)
T ss_pred -----CcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH-----------------
Confidence 0111344578889999998876432111 0012456899999999999865432110
Q ss_pred CceeEEEEEEeecCCCCCceeEEEEEcC---CCcEEEEEccchhhhHHhhcc---cc------cccHHHHHHHHHHHHhc
Q 002391 590 PVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSK---NG------RMYEEATTKLLNEYGEA 657 (928)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~---~~------~~~~~~~~~~~~~~~~~ 657 (928)
.+..|+.++.+||+|+||||++++... ++.+++|+|||||.|+++|+. ++ ++.++.+.+.+++|+.+
T Consensus 444 -~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~ 522 (997)
T TIGR01106 444 -MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGL 522 (997)
T ss_pred -HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhc
Confidence 145688899999999999999988642 356899999999999999974 11 22456688889999999
Q ss_pred CCeEEEEEEEeCCHHHHHH-HHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCc
Q 002391 658 GLRTLALAYKQLDESEYSA-WNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLK 736 (928)
Q Consensus 658 Glr~l~~A~k~l~~~e~~~-~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIk 736 (928)
|+|||++|||+++.++++. |.. +++ ..+.+|+||+|+|+++++||+|++++++|++|+++||+
T Consensus 523 GlRvla~A~k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~ 586 (997)
T TIGR01106 523 GERVLGFCHLYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIK 586 (997)
T ss_pred CCEEEEEEEeecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCe
Confidence 9999999999998765432 211 111 01344899999999999999999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCch
Q 002391 737 IWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKT 816 (928)
Q Consensus 737 v~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~ 816 (928)
++|+|||++.||.++|+++|++.++.... +. +...+....... .......++++|.+
T Consensus 587 v~~~TGd~~~ta~~ia~~~gi~~~~~~~~-------~~------------i~~~~~~~~~~~----~~~~~~~~vi~G~~ 643 (997)
T TIGR01106 587 VIMVTGDHPITAKAIAKGVGIISEGNETV-------ED------------IAARLNIPVSQV----NPRDAKACVVHGSD 643 (997)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCCccch-------hh------------hhhhcccccccc----ccccccceEEEhHH
Confidence 99999999999999999999987653310 00 000000000000 01112247999999
Q ss_pred hhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEec--CCchhHH
Q 002391 817 LAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQI 894 (928)
Q Consensus 817 l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~--g~e~~~a 894 (928)
++.+.++++. ++...+..+||||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ |+++ |
T Consensus 644 l~~l~~~el~----~~~~~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v--a 716 (997)
T TIGR01106 644 LKDMTSEQLD----EILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--S 716 (997)
T ss_pred hhhCCHHHHH----HHHHhcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHhhCCcceecCCcccHH--H
Confidence 9987765443 3444556679999999999999999998 7999999999999999999999999985 5676 8
Q ss_pred HHhCceeccccc----ccccccchhhH-HHHhHHhhh
Q 002391 895 VLSGHDMRKCIQ----VFAFDIADCSL-KIAKFATFC 926 (928)
Q Consensus 895 ~~aaD~v~~~~~----~~~~~~~~~~~-~~i~~~~~~ 926 (928)
+++||+++..++ +.++++||+.. ++.||++|+
T Consensus 717 k~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~ 753 (997)
T TIGR01106 717 KQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYT 753 (997)
T ss_pred HHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988655 44789999954 445677665
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-92 Score=787.93 Aligned_cols=652 Identities=22% Similarity=0.283 Sum_probs=513.2
Q ss_pred ccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhccc-----CCCCCCcchhhhHHH---HHHHHHHH
Q 002391 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-----LSPFSPVSMLLPLAI---VVGVSMAK 119 (928)
Q Consensus 48 ~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~-----~~~~~~~~~~~~l~~---vl~~~~~~ 119 (928)
..|+.-||.|.++..+...++ ..+||.|++..-+++++++++++.. ..+.+|+....+++. |++++++.
T Consensus 126 ~~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~n 202 (1034)
T KOG0204|consen 126 ERRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVN 202 (1034)
T ss_pred HHHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecc
Confidence 346778999999999887655 7899999999999999999999865 224467766554443 33445444
Q ss_pred HHHHHHHHhhhhhhhccceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcc
Q 002391 120 EALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNL 199 (928)
Q Consensus 120 ~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~ 199 (928)
++-++.+-.+.+++..+.++.|+ |||+.++|+..||+||||+.|+.||.+||||+++++++ +.||||+|||||++
T Consensus 203 Dy~qe~QF~~L~~~k~~~k~~Vi-R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd~ 277 (1034)
T KOG0204|consen 203 DYRQELQFRKLQKEKRNIKFQVI-RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESDH 277 (1034)
T ss_pred hhHHhhhhhhhhhhhhceEEEEE-ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCcc
Confidence 44444444444555556889999 89999999999999999999999999999999999765 99999999999999
Q ss_pred eeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcce
Q 002391 200 KVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSK 279 (928)
Q Consensus 200 ~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tk 279 (928)
+.|.+.... +.++||.+++|. +.++|+.+|.+|.
T Consensus 278 v~k~~~~dP-------------------------fLlSGTkv~eGs---------------------gkMlVTaVGmnt~ 311 (1034)
T KOG0204|consen 278 VQKSLDKDP-------------------------FLLSGTKVMEGS---------------------GKMLVTAVGMNTQ 311 (1034)
T ss_pred eeccCCCCC-------------------------eEeecceeecCc---------------------ceEEEEEeeecch
Confidence 999874333 668999999998 9999999999996
Q ss_pred e---eecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHH
Q 002391 280 V---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356 (928)
Q Consensus 280 i---~~~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (928)
. |.........+||+|-++++++..+..+.++++++++++..+...... .+. +...............+..|
T Consensus 312 wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~--~~~---~~~~~~~~~~~~~~~~v~~f 386 (1034)
T KOG0204|consen 312 WGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGK--TKI---EGGTGTTWSDEYIQEFVKFF 386 (1034)
T ss_pred HhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhee--eec---CCCCCccccHHHHHHHHHHh
Confidence 4 444445565789999999999999999888888887776554221110 000 00000000111123344567
Q ss_pred HHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEE
Q 002391 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKC 436 (928)
Q Consensus 357 ~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~ 436 (928)
..++.+++.++|++||+++++..++.+.+|. +-+.++|.+.++|++|..+.||+|||||||.|.|++.+.
T Consensus 387 ~i~VTilVVAVPEGLPLAVTLsLAys~kkMm----------kD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~ 456 (1034)
T KOG0204|consen 387 IIAVTILVVAVPEGLPLAVTLSLAYSMKKMM----------KDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQS 456 (1034)
T ss_pred hheeEEEEEECCCCccHHHHHHHHHHHHHHh----------cchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEee
Confidence 7788889999999999999999999999884 555679999999999999999999999999999999999
Q ss_pred EEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCCC
Q 002391 437 SVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLK 516 (928)
Q Consensus 437 ~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (928)
++++..|...... . .
T Consensus 457 ~~~~~~~k~~~~~-~----------------------------------------------------------------~ 471 (1034)
T KOG0204|consen 457 YIGSEHYKVNSPK-S----------------------------------------------------------------S 471 (1034)
T ss_pred eeccccccccCcc-c----------------------------------------------------------------c
Confidence 9998877533210 0 0
Q ss_pred CCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEE
Q 002391 517 EPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFK 596 (928)
Q Consensus 517 ~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 596 (928)
.-.+.....++..++...+.....+++.+...-+.+||.|.||+.|+..+|.+|.. .+...+
T Consensus 472 ~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~------------------~R~e~~ 533 (1034)
T KOG0204|consen 472 NLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD------------------VRPEEK 533 (1034)
T ss_pred cCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh------------------hcchhh
Confidence 00112233455555555444433444444445567999999999999999987755 356778
Q ss_pred EEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcc----c------ccccHHHHHHHHHHHHhcCCeEEEEEE
Q 002391 597 ILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSK----N------GRMYEEATTKLLNEYGEAGLRTLALAY 666 (928)
Q Consensus 597 il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~----~------~~~~~~~~~~~~~~~~~~Glr~l~~A~ 666 (928)
+++++||+|.||||+++++.+++..++|+|||.|.|+..|+. + +++....+++.++.||.+||||+|+||
T Consensus 534 v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy 613 (1034)
T KOG0204|consen 534 VVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAY 613 (1034)
T ss_pred eeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEe
Confidence 999999999999999999988877349999999999999976 1 123455788999999999999999999
Q ss_pred EeCCHH--HHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCc
Q 002391 667 KQLDES--EYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (928)
Q Consensus 667 k~l~~~--e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~ 744 (928)
|+.... +..+|.. .+..+.+|+++|++||+||+||||+++|+.|+.|||.|.|+|||+
T Consensus 614 ~df~~~~~~~~~~~~--------------------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDN 673 (1034)
T KOG0204|consen 614 RDFVAGPDEEPSWDN--------------------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDN 673 (1034)
T ss_pred eccccCCCCCCCccc--------------------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCc
Confidence 995433 1112211 135678999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHH
Q 002391 745 METAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDD 824 (928)
Q Consensus 745 ~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~ 824 (928)
..||.+||.+|||++++.. .++++|.+|..+.+++
T Consensus 674 I~TAkAIA~eCGILt~~~d---------------------------------------------~~~lEG~eFr~~s~ee 708 (1034)
T KOG0204|consen 674 INTAKAIARECGILTPGGD---------------------------------------------FLALEGKEFRELSQEE 708 (1034)
T ss_pred HHHHHHHHHHcccccCCCc---------------------------------------------cceecchhhhhcCHHH
Confidence 9999999999999987643 2467788888776666
Q ss_pred HHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEe--cCCchhHHHHhCceec
Q 002391 825 MKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI--SGVEGMQIVLSGHDMR 902 (928)
Q Consensus 825 ~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~--~g~e~~~a~~aaD~v~ 902 (928)
......++. |+||.+|.+|..+|+.+++ .|++|++.|||.||.|+|++||||.|| +|+|. ||++||+|.
T Consensus 709 ~~~i~pkl~------VlARSSP~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDIIi 779 (1034)
T KOG0204|consen 709 RDKIWPKLR------VLARSSPNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDIII 779 (1034)
T ss_pred HHhhhhhhe------eeecCCCchHHHHHHHHHh-cCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeEE
Confidence 555555443 9999999999999999998 899999999999999999999999976 67888 999999998
Q ss_pred cccc----ccccccchh-hHHHHhHHhh
Q 002391 903 KCIQ----VFAFDIADC-SLKIAKFATF 925 (928)
Q Consensus 903 ~~~~----~~~~~~~~~-~~~~i~~~~~ 925 (928)
..++ +-+++|+|+ |.++-||+||
T Consensus 780 ~DDNFssIVk~v~WGR~VY~nIqKFiQF 807 (1034)
T KOG0204|consen 780 LDDNFSSIVKAVKWGRNVYDNIQKFLQF 807 (1034)
T ss_pred EcCchHHHHHHHHhhhHHHHHHHHhhee
Confidence 8666 448899999 8999999998
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-89 Score=857.81 Aligned_cols=690 Identities=22% Similarity=0.270 Sum_probs=500.3
Q ss_pred ccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 002391 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127 (928)
Q Consensus 48 ~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~~~~~~~~~~~~~l~~vl~~~~~~~~~~d~~r 127 (928)
..++.+||.|.+..++.+++ +.|+++|..|++++++++++++++ .++|...+.++++++++.+...++.++.
T Consensus 146 ~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~----~~~~~~~~~i~~i~~~~~~~~~~~~~k~ 217 (1054)
T TIGR01657 146 AQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLL----DEYYYYSLCIVFMSSTSISLSVYQIRKQ 217 (1054)
T ss_pred HHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677899999999876655 889999999999999998888876 4544444445566667777788888877
Q ss_pred hhhhhhhc--cceEEEEeCCceEEEeecccCCcCcEEEec--cCCcCCceEEEEeecCCCceEEEEeecCCCCCcceeee
Q 002391 128 FMQDKEVN--ARKVSVHVGNGVFSYKPWEKIQVGDIVKVE--KDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (928)
Q Consensus 128 ~k~~~~~n--~~~~~V~~r~g~~~~i~~~~L~vGDII~l~--~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~ 203 (928)
.++.+.+. .+.++|+ |||+|++|++++|+|||||.|+ +|+.+|||++||+ |.|.||||+|||||.|+.|.
T Consensus 218 ~~~L~~~~~~~~~v~V~-Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~-----g~~~VdES~LTGES~Pv~K~ 291 (1054)
T TIGR01657 218 MQRLRDMVHKPQSVIVI-RNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS-----GSCIVNESMLTGESVPVLKF 291 (1054)
T ss_pred HHHHHHhhcCCeeEEEE-ECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe-----CcEEEecccccCCccceecc
Confidence 77766654 4689999 8999999999999999999999 9999999999998 77999999999999999998
Q ss_pred cccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEec------CCeEEEEEEEecCc
Q 002391 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN------TAHVYGSVIFTGHD 277 (928)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~n------t~~~~gvVv~tG~~ 277 (928)
+.+.... +.+. +. ..+.+..|+++.||.+.. +|.+.|+|++||.+
T Consensus 292 ~~~~~~~--~~~~-------~~--------------------~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~ 342 (1054)
T TIGR01657 292 PIPDNGD--DDED-------LF--------------------LYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFS 342 (1054)
T ss_pred cCCcccc--cccc-------cc--------------------ccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCcc
Confidence 8643100 0000 00 012345567777777753 46799999999999
Q ss_pred ceeeecCC---CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHH
Q 002391 278 SKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLA 354 (928)
Q Consensus 278 Tki~~~~~---~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (928)
|..++..+ .++.+.+++++.+.+++.+++.+.++.+++.++. ++..+ ..| ..
T Consensus 343 T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~-~~~~~----~~~--------------------~~ 397 (1054)
T TIGR01657 343 TSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIE-LIKDG----RPL--------------------GK 397 (1054)
T ss_pred ccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcC----CcH--------------------HH
Confidence 96665543 4455568889998888776655444333322221 11111 112 35
Q ss_pred HHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEE
Q 002391 355 HLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL 434 (928)
Q Consensus 355 ~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~ 434 (928)
.|++++.+++.+||++||++++++...+..++ ++++++||++..+|.||+++++|||||||||+|+|+|.
T Consensus 398 ~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~ 467 (1054)
T TIGR01657 398 IILRSLDIITIVVPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLR 467 (1054)
T ss_pred HHHHHHHHHHhhcCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEE
Confidence 78889999999999999999999999999988 78999999999999999999999999999999999999
Q ss_pred EEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCC
Q 002391 435 KCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNW 514 (928)
Q Consensus 435 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (928)
+++..+...... . ..
T Consensus 468 ~v~~~~~~~~~~--~----------------------------------------------------------~~----- 482 (1054)
T TIGR01657 468 GVQGLSGNQEFL--K----------------------------------------------------------IV----- 482 (1054)
T ss_pred eEecccCccccc--c----------------------------------------------------------cc-----
Confidence 987543210000 0 00
Q ss_pred CCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEE-EcCCe-----EEEEecCCCCC
Q 002391 515 LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYR-RTQSS-----VFIRERYPPKG 588 (928)
Q Consensus 515 ~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~-~~~~~-----~~i~~~~~~~~ 588 (928)
..........+..++++||++.... + ...+||.|.|+++++ |+.+.. ..... ..+.. .+
T Consensus 483 -~~~~~~~~~~~~~~~a~C~~~~~~~----~---~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~----~~ 547 (1054)
T TIGR01657 483 -TEDSSLKPSITHKALATCHSLTKLE----G---KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRT----DD 547 (1054)
T ss_pred -ccccccCchHHHHHHHhCCeeEEEC----C---EEecCHHHHHHHHhC---CCEEECCCCcccccccccceec----cC
Confidence 0000011224667899999986532 1 235899999999975 555433 11000 00000 00
Q ss_pred CCceeEEEEEEeecCCCCCceeEEEEEcCC-CcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEE
Q 002391 589 QPVEREFKILNLLDFTSKRKRMSVIVRDED-GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYK 667 (928)
Q Consensus 589 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k 667 (928)
....|++++.+||+|++|||||+++.++ +++++|+|||||.|+++|++. ..++.+.+.+++|+.+|+|||++|||
T Consensus 548 --~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~--~~p~~~~~~~~~~a~~G~RVLalA~k 623 (1054)
T TIGR01657 548 --PPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE--TVPSDYQEVLKSYTREGYRVLALAYK 623 (1054)
T ss_pred --CCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc--CCChhHHHHHHHHHhcCCEEEEEEEe
Confidence 1357999999999999999999999754 578999999999999999864 25678889999999999999999999
Q ss_pred eCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhh
Q 002391 668 QLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (928)
Q Consensus 668 ~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~t 747 (928)
++++.+++++.. .+| +.+|+||+|+|+++++|++|++++++|+.|+++||+++|+|||++.|
T Consensus 624 ~l~~~~~~~~~~----------~~r--------~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 624 ELPKLTLQKAQD----------LSR--------DAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred ecCccchhhhhh----------ccH--------HHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 998543322211 234 56789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccccccCceEEEEeCCCcchH-HHHHHHHHHhh-----HHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhh
Q 002391 748 AINIGFACSLLRQGMKQICITALNSDSV-GKAAKEAVKDN-----ILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (928)
Q Consensus 748 a~~ia~~~gii~~~~~~i~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~ 821 (928)
|.+||++|||+.++..++..+....+.. ...+.+...++ .....................+.++++|+.+..+.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999987655544332110000 00000000000 00000000000000011223467899999998764
Q ss_pred hHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCcee
Q 002391 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDM 901 (928)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v 901 (928)
+. ..+.+.++...+ .||||++|+||.++|+.+|+ .|++|+|+|||+||++||++|||||||++.| |..+|||+
T Consensus 766 ~~-~~~~l~~~~~~~--~VfAR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ALK~AdVGIam~~~d---as~AA~f~ 838 (1054)
T TIGR01657 766 AH-SPELLLRLLSHT--TVFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCGALKQADVGISLSEAE---ASVAAPFT 838 (1054)
T ss_pred Hh-hHHHHHHHHhcC--eEEEecCHHHHHHHHHHHHh-CCCeEEEEeCChHHHHHHHhcCcceeecccc---ceeecccc
Confidence 32 123344444444 49999999999999999998 7999999999999999999999999998775 66899999
Q ss_pred ccccc----ccccccchhhHHH-HhHHh
Q 002391 902 RKCIQ----VFAFDIADCSLKI-AKFAT 924 (928)
Q Consensus 902 ~~~~~----~~~~~~~~~~~~~-i~~~~ 924 (928)
++.++ +.+|++||++..+ +++++
T Consensus 839 l~~~~~~~I~~~I~eGR~~l~~~~~~~~ 866 (1054)
T TIGR01657 839 SKLASISCVPNVIREGRCALVTSFQMFK 866 (1054)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88766 4588999995553 33333
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-90 Score=856.80 Aligned_cols=639 Identities=21% Similarity=0.278 Sum_probs=488.1
Q ss_pred cccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhccc--CCC--------CCCcchh---hhHHHHH
Q 002391 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LSP--------FSPVSML---LPLAIVV 113 (928)
Q Consensus 47 ~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~--~~~--------~~~~~~~---~~l~~vl 113 (928)
..+|+.+||+|.++.++.+.++ +.+++||+++++++|+++++++++. ..+ ..|+..+ +++++++
T Consensus 66 v~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~ 142 (941)
T TIGR01517 66 LERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVV 142 (941)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHh
Confidence 4557888999999999886554 7899999999999999999999873 111 1444443 3333444
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecC
Q 002391 114 GVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNL 193 (928)
Q Consensus 114 ~~~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~L 193 (928)
+++++.++.+++..++.++..++.+++|+ |||++++|++++|+|||||.|++||.|||||+|++++ .+.||||+|
T Consensus 143 ~i~~~~e~~~~~~~~~l~~~~~~~~~~Vi-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~L 217 (941)
T TIGR01517 143 LVTAVNDYKKELQFRQLNREKSAQKIAVI-RGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESSI 217 (941)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCceEEE-ECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEeccc
Confidence 55556666666655555544567789999 8999999999999999999999999999999999942 499999999
Q ss_pred CCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEE
Q 002391 194 DGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIF 273 (928)
Q Consensus 194 tGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~ 273 (928)
||||.|+.|.+++.. ..|+||.+.+|. +.|+|++
T Consensus 218 TGES~pv~K~~~~~n-------------------------~v~~GT~v~~G~---------------------~~~iV~~ 251 (941)
T TIGR01517 218 TGESDPIKKGAPKDS-------------------------FLLSGTVVNEGS---------------------GRMLVTA 251 (941)
T ss_pred CCCCCcccccCCCCc-------------------------eEEeCCeEEeeE---------------------EEEEEEE
Confidence 999999999874321 346777776666 9999999
Q ss_pred ecCcceeee---cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cccCCCccccCCCCCccccCCCCCc
Q 002391 274 TGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKI-NYQTPQWWYLKPKETDVYFNPGKPL 349 (928)
Q Consensus 274 tG~~Tki~~---~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (928)
||.+|.+++ +...++ +++++++.++++..++..+.++++++.++++.+.. ... .|. +.. .+....
T Consensus 252 tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~---~~~---~~~----~~~~~~ 320 (941)
T TIGR01517 252 VGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRI---IRG---DGR----DTEEDA 320 (941)
T ss_pred eCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---ccc---ccc----ccchhh
Confidence 999996543 444444 46799999999999998888877777666553211 000 000 000 000001
Q ss_pred hhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeec
Q 002391 350 VPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCN 429 (928)
Q Consensus 350 ~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n 429 (928)
......|.+++.+++.+|||+|++++++....++.++ +++++++|+++.+|+||++++||||||||||+|
T Consensus 321 ~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n 390 (941)
T TIGR01517 321 QTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDKTGTLTQN 390 (941)
T ss_pred HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcCcCceeec
Confidence 2234578889999999999999999999999988888 889999999999999999999999999999999
Q ss_pred eeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhh
Q 002391 430 QMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRL 509 (928)
Q Consensus 430 ~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (928)
+|+|.+++..+..|.....
T Consensus 391 ~m~v~~~~~~~~~~~~~~~------------------------------------------------------------- 409 (941)
T TIGR01517 391 VMSVVQGYIGEQRFNVRDV------------------------------------------------------------- 409 (941)
T ss_pred eEEEEEEEEecceEecCcc-------------------------------------------------------------
Confidence 9999999876543321100
Q ss_pred cccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCC
Q 002391 510 MDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (928)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~ 589 (928)
.. ..+....+++...+.||+..+...++. ...+..+||+|.|+++++++.|.....
T Consensus 410 ~~------~~~~~~~~~l~~~~~~~s~~~~~~~~~-~~~~~~g~p~e~All~~~~~~~~~~~~----------------- 465 (941)
T TIGR01517 410 LR------NVPKHVRNILVEGISLNSSSEEVVDRG-GKRAFIGSKTECALLGFLLLLGRDYQE----------------- 465 (941)
T ss_pred cc------cCCHHHHHHHHHHHHhCCCCccccCCC-CccccCCCccHHHHHHHHHHcCCCHHH-----------------
Confidence 00 000123344444455554433221111 123456899999999999987743211
Q ss_pred CceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcc----ccc-----ccHHHHHHHHHHHHhcCCe
Q 002391 590 PVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSK----NGR-----MYEEATTKLLNEYGEAGLR 660 (928)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~----~~~-----~~~~~~~~~~~~~~~~Glr 660 (928)
.+..|++++.+||+|+||||+++++.+++++++|+|||||.|+++|+. ++. +.++.+.+.+++|+.+|+|
T Consensus 466 -~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~R 544 (941)
T TIGR01517 466 -VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALR 544 (941)
T ss_pred -HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCE
Confidence 124577888999999999999999987788999999999999999974 111 1245678888999999999
Q ss_pred EEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEE
Q 002391 661 TLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740 (928)
Q Consensus 661 ~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~ml 740 (928)
|+++|||+++.+++..| +..|++|+|+|+++++|++|++++++|+.|+++||++||+
T Consensus 545 vl~~A~~~~~~~~~~~~-----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~mi 601 (941)
T TIGR01517 545 TICLAYRDFAPEEFPRK-----------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMV 601 (941)
T ss_pred EEEEEEEecCccccccc-----------------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEE
Confidence 99999999876543221 2347899999999999999999999999999999999999
Q ss_pred cCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHh
Q 002391 741 TGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYA 820 (928)
Q Consensus 741 TGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~ 820 (928)
|||++.||.++|++|||..++. .+++|.++..+
T Consensus 602 TGD~~~tA~~iA~~~GI~~~~~-----------------------------------------------~vi~G~~~~~l 634 (941)
T TIGR01517 602 TGDNIDTAKAIARNCGILTFGG-----------------------------------------------LAMEGKEFRRL 634 (941)
T ss_pred CCCChHHHHHHHHHcCCCCCCc-----------------------------------------------eEeeHHHhhhC
Confidence 9999999999999999976432 26777777766
Q ss_pred hhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEec--CCchhHHHHhC
Q 002391 821 LEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQIVLSG 898 (928)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~--g~e~~~a~~aa 898 (928)
.++++..... +..||||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ |++. |+++|
T Consensus 635 ~~~el~~~i~------~~~Vfar~sPe~K~~iV~~lq~-~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aA 705 (941)
T TIGR01517 635 VYEEMDPILP------KLRVLARSSPLDKQLLVLMLKD-MGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV--AKEAS 705 (941)
T ss_pred CHHHHHHHhc------cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCCchHHHHHhCCcceecCCCccHH--HHHhC
Confidence 5555444332 3469999999999999999998 7999999999999999999999999995 5666 99999
Q ss_pred ceeccccc----ccccccchhhHHHHh-HHhh
Q 002391 899 HDMRKCIQ----VFAFDIADCSLKIAK-FATF 925 (928)
Q Consensus 899 D~v~~~~~----~~~~~~~~~~~~~i~-~~~~ 925 (928)
|+++..++ +.++++||++.++|+ +++|
T Consensus 706 DivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~ 737 (941)
T TIGR01517 706 DIILLDDNFASIVRAVKWGRNVYDNIRKFLQF 737 (941)
T ss_pred CEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988555 448899999766665 4443
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-89 Score=839.96 Aligned_cols=668 Identities=22% Similarity=0.254 Sum_probs=497.7
Q ss_pred HHHHHhhHHHHHHHHHHHHhccc-CCC------CCCcchhhhHHHHHHHHHHHHHHHHHHHhhhhhhhc---cceEEEEe
Q 002391 74 LFEQFNRVANIYFLIAALLSVTP-LSP------FSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVN---ARKVSVHV 143 (928)
Q Consensus 74 l~~qf~~~~~~~~l~~~il~~i~-~~~------~~~~~~~~~l~~vl~~~~~~~~~~d~~r~k~~~~~n---~~~~~V~~ 143 (928)
+++||++|++++++++++++++. +.+ ..|+..++ ++++++++++...+++++..++.+.+. ..+++|+
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~-Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~Vi- 78 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFV-ILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVL- 78 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE-
Confidence 47899999999999999999985 221 24444444 446667788889999999988876665 4789999
Q ss_pred CCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCchhhhccCcEE
Q 002391 144 GNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGT 223 (928)
Q Consensus 144 r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~ 223 (928)
|||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.|.+.....
T Consensus 79 Rdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~-------------- 140 (917)
T TIGR01116 79 RDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPD-------------- 140 (917)
T ss_pred ECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCc--------------
Confidence 89999999999999999999999999999999999653 899999999999999998753210
Q ss_pred EEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcceeee---cCCCCCCCccHHHHHHHH
Q 002391 224 VKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDK 300 (928)
Q Consensus 224 i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~~~n~ 300 (928)
....+.+.+|++++||.+.+ |++.|+|++||.+|++++ +...++.+++++|+.+++
T Consensus 141 --------------------~~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~ 199 (917)
T TIGR01116 141 --------------------ERAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDE 199 (917)
T ss_pred --------------------cccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHH
Confidence 00113455678888888875 679999999999998875 455667778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccc-cCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHH
Q 002391 301 IIFILFAILVLISLISSIGFAVKINY-QTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVK 379 (928)
Q Consensus 301 ~~~~~~~~~i~~~~i~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~ 379 (928)
++.+++.+.++++++.++++..+... .....|+ ...+..+..++++++.+||++||++++++.
T Consensus 200 ~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l 263 (917)
T TIGR01116 200 FGELLSKVIGLICILVWVINIGHFNDPALGGGWI----------------QGAIYYFKIAVALAVAAIPEGLPAVITTCL 263 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccchhH----------------HHHHHHHHHHHhhhhhccccccHHHHHHHH
Confidence 99999888877777766554321110 0001121 122345667888999999999999999999
Q ss_pred HHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEEEEcCcccCCCchHHHHHHHHHhh
Q 002391 380 FLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMA 459 (928)
Q Consensus 380 ~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~ 459 (928)
++++.+| +++++++|+++.+|+||++++||||||||||+|+|+|.+++..+..+.... .
T Consensus 264 ~~~~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-~---------- 322 (917)
T TIGR01116 264 ALGTRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN-E---------- 322 (917)
T ss_pred HHHHHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc-e----------
Confidence 9999998 788999999999999999999999999999999999999987664321000 0
Q ss_pred hchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCCCCCChHHHHHHHHHHhhccceeec
Q 002391 460 IDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPE 539 (928)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~ 539 (928)
....+ ..+...+....+..............++.++++||++...
T Consensus 323 ---------------------~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~ 367 (917)
T TIGR01116 323 ---------------------FCVTG--------------TTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLD 367 (917)
T ss_pred ---------------------EEecC--------------CccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeee
Confidence 00000 0000000000000000011234566788999999998765
Q ss_pred ccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCC
Q 002391 540 LNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDG 619 (928)
Q Consensus 540 ~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~ 619 (928)
.++..+.+. ..++|+|.||+++++++|+....+....+.....+.. ......|++++.+||+|+|||||++++. ++
T Consensus 368 ~~~~~~~~~-~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~-~~ 443 (917)
T TIGR01116 368 FNERKGVYE-KVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKP-ST 443 (917)
T ss_pred ccccCCcee-eccChhHHHHHHHHHHcCCCchhcccccccccccchh--HHHHhhcceeeecccChhhCeEEEEEee-CC
Confidence 433222222 2489999999999999998776544333222211100 0013568899999999999999999986 46
Q ss_pred cEEEEEccchhhhHHhhccc----c------cccHHHHHHHHHHHHh-cCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhh
Q 002391 620 QILLLCKGADSIIFDRLSKN----G------RMYEEATTKLLNEYGE-AGLRTLALAYKQLDESEYSAWNSEFQKAKSSI 688 (928)
Q Consensus 620 ~~~l~~KGa~~~i~~~~~~~----~------~~~~~~~~~~~~~~~~-~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~l 688 (928)
++++|+|||||.|+++|+.- + ++..+.+.+++++|+. +|+|||++|||.++.++.. +..
T Consensus 444 ~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~~--------- 513 (917)
T TIGR01116 444 GNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-DLL--------- 513 (917)
T ss_pred cEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc-ccc---------
Confidence 78999999999999999741 1 2245678888999999 9999999999999764321 000
Q ss_pred hhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEe
Q 002391 689 GADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT 768 (928)
Q Consensus 689 ~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~ 768 (928)
.+. ...+.+|+||+|+|+++++||+|++++++|+.|+++||++||+|||+.+||.++|+++|+..++..+.
T Consensus 514 -~~~-----~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~--- 584 (917)
T TIGR01116 514 -SDP-----ANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT--- 584 (917)
T ss_pred -ccc-----hhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc---
Confidence 010 12256789999999999999999999999999999999999999999999999999999976543211
Q ss_pred CCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhh
Q 002391 769 ALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQ 848 (928)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~q 848 (928)
...++|..+..+.+++... ..++.+||||++|+|
T Consensus 585 ----------------------------------------~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~ 618 (917)
T TIGR01116 585 ----------------------------------------FKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSH 618 (917)
T ss_pred ----------------------------------------ceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHH
Confidence 1245666665543332221 234567999999999
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEec-CCchhHHHHhCceeccccc----ccccccchhh-HHHHhH
Q 002391 849 KALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQIVLSGHDMRKCIQ----VFAFDIADCS-LKIAKF 922 (928)
Q Consensus 849 K~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~-g~e~~~a~~aaD~v~~~~~----~~~~~~~~~~-~~~i~~ 922 (928)
|.++|+.+++ .|++|+|+|||.||++||++|||||||+ |.+. |+++||+++..++ +.++++||+. .++.||
T Consensus 619 K~~iV~~lq~-~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~ 695 (917)
T TIGR01116 619 KSELVELLQE-QGEIVAMTGDGVNDAPALKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAAVEEGRAIYNNMKQF 695 (917)
T ss_pred HHHHHHHHHh-cCCeEEEecCCcchHHHHHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999997 7999999999999999999999999994 4444 8999999988644 4477899984 455567
Q ss_pred Hhhh
Q 002391 923 ATFC 926 (928)
Q Consensus 923 ~~~~ 926 (928)
++|+
T Consensus 696 i~~~ 699 (917)
T TIGR01116 696 IRYM 699 (917)
T ss_pred HHHH
Confidence 7665
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-86 Score=810.81 Aligned_cols=606 Identities=19% Similarity=0.234 Sum_probs=474.9
Q ss_pred ccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 002391 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127 (928)
Q Consensus 48 ~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~~~~~~~~~~~~~l~~vl~~~~~~~~~~d~~r 127 (928)
.+++++||.|.++.++.+.++ +.|++||++|++++++++++++++. ..|. ..+.++++++++.+.+++++++.
T Consensus 74 ~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~~---~~~~-~a~~I~~iv~i~~~i~~~qe~ra 146 (902)
T PRK10517 74 ESAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYAT---EDLF-AAGVIALMVAISTLLNFIQEARS 146 (902)
T ss_pred HHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHH---ccHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 457889999999999887554 8899999999999999999999873 3444 44456677788888899999998
Q ss_pred hhhhhhhc---cceEEEEeCC------ceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCc
Q 002391 128 FMQDKEVN---ARKVSVHVGN------GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETN 198 (928)
Q Consensus 128 ~k~~~~~n---~~~~~V~~r~------g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~ 198 (928)
.++.+.+. ..+++|+ || |++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||.
T Consensus 147 ~~~~~~L~~l~~~~a~Vi-R~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES~ 221 (902)
T PRK10517 147 TKAADALKAMVSNTATVL-RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGESL 221 (902)
T ss_pred HHHHHHHHhhCCCeEEEE-ECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCCC
Confidence 87755554 5789999 77 789999999999999999999999999999999443 7999999999999
Q ss_pred ceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcc
Q 002391 199 LKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDS 278 (928)
Q Consensus 199 ~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~T 278 (928)
|+.|.+++.... ...+.+..|+++.||.+.. |.+.++|+.||.+|
T Consensus 222 PV~K~~~~~~~~----------------------------------~~~~~~~~n~vfaGT~V~~-G~~~~vV~atG~~T 266 (902)
T PRK10517 222 PVEKFATTRQPE----------------------------------HSNPLECDTLCFMGTNVVS-GTAQAVVIATGANT 266 (902)
T ss_pred ceeccccccccc----------------------------------ccCccccccceeeCceEee-eeEEEEEEEecccc
Confidence 999998653210 0011223344444444442 33999999999999
Q ss_pred eeeecC---CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHH
Q 002391 279 KVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAH 355 (928)
Q Consensus 279 ki~~~~---~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (928)
.+++.. ..+..+++++++.++++..++..+.++++++.++++.+... .| ...
T Consensus 267 ~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~-----~~--------------------~~~ 321 (902)
T PRK10517 267 WFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG-----DW--------------------WEA 321 (902)
T ss_pred HHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC-----CH--------------------HHH
Confidence 775543 45566789999999999999888888777766655432211 12 247
Q ss_pred HHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEE
Q 002391 356 LVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLK 435 (928)
Q Consensus 356 ~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~ 435 (928)
|.+++++++.+|||+||++++++...++.++ +++++++|+++.+|+||++++||||||||||+|+|++.+
T Consensus 322 l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~ 391 (902)
T PRK10517 322 ALFALSVAVGLTPEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLEN 391 (902)
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEE
Confidence 7889999999999999999999999988888 899999999999999999999999999999999999987
Q ss_pred EEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCC
Q 002391 436 CSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWL 515 (928)
Q Consensus 436 ~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (928)
+... .+..
T Consensus 392 ~~~~---~~~~--------------------------------------------------------------------- 399 (902)
T PRK10517 392 HTDI---SGKT--------------------------------------------------------------------- 399 (902)
T ss_pred EecC---CCCC---------------------------------------------------------------------
Confidence 5310 0000
Q ss_pred CCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEE
Q 002391 516 KEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREF 595 (928)
Q Consensus 516 ~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 595 (928)
..+++...++|.... . ..+||.|.|++.++...+.. .....|
T Consensus 400 -------~~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~~~~--------------------~~~~~~ 441 (902)
T PRK10517 400 -------SERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEESAR--------------------SLASRW 441 (902)
T ss_pred -------HHHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhcchh--------------------hhhhcC
Confidence 012333334433211 0 14799999999998753200 013457
Q ss_pred EEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhccc---c------cccHHHHHHHHHHHHhcCCeEEEEEE
Q 002391 596 KILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---G------RMYEEATTKLLNEYGEAGLRTLALAY 666 (928)
Q Consensus 596 ~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~------~~~~~~~~~~~~~~~~~Glr~l~~A~ 666 (928)
+.++.+||+|+||||+++++..++.+.+++|||++.|+++|+.- + ++..+.+.+..++++.+|+||+++||
T Consensus 442 ~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~ 521 (902)
T PRK10517 442 QKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVAT 521 (902)
T ss_pred ceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 77889999999999999998877888999999999999999751 1 12345667778899999999999999
Q ss_pred EeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchh
Q 002391 667 KQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (928)
Q Consensus 667 k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ 746 (928)
|+++..+. ++ + ...|+|++|+|+++++||+|++++++|++|+++||+|+|+|||++.
T Consensus 522 k~~~~~~~-~~-------------~---------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~ 578 (902)
T PRK10517 522 KYLPAREG-DY-------------Q---------RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSEL 578 (902)
T ss_pred ecCCcccc-cc-------------c---------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHH
Confidence 98865321 00 0 1136899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHH
Q 002391 747 TAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMK 826 (928)
Q Consensus 747 ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~ 826 (928)
||.+||+++||... .+++|.+++.+-++++.
T Consensus 579 tA~~IA~~lGI~~~-------------------------------------------------~v~~G~el~~l~~~el~ 609 (902)
T PRK10517 579 VAAKVCHEVGLDAG-------------------------------------------------EVLIGSDIETLSDDELA 609 (902)
T ss_pred HHHHHHHHcCCCcc-------------------------------------------------CceeHHHHHhCCHHHHH
Confidence 99999999999421 15667777665544444
Q ss_pred HHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecC-CchhHHHHhCceecccc
Q 002391 827 HHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG-VEGMQIVLSGHDMRKCI 905 (928)
Q Consensus 827 ~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g-~e~~~a~~aaD~v~~~~ 905 (928)
..... ..||||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||++ ++. |+++||+++..+
T Consensus 610 ~~~~~------~~VfAr~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd 680 (902)
T PRK10517 610 NLAER------TTLFARLTPMHKERIVTLLKR-EGHVVGFMGDGINDAPALRAADIGISVDGAVDI--AREAADIILLEK 680 (902)
T ss_pred HHHhh------CcEEEEcCHHHHHHHHHHHHH-CCCEEEEECCCcchHHHHHhCCEEEEeCCcCHH--HHHhCCEEEecC
Confidence 33322 349999999999999999998 79999999999999999999999999963 344 999999998866
Q ss_pred c----ccccccchhhHHHH-hHHhhh
Q 002391 906 Q----VFAFDIADCSLKIA-KFATFC 926 (928)
Q Consensus 906 ~----~~~~~~~~~~~~~i-~~~~~~ 926 (928)
+ +.++++||++.++| ||++|+
T Consensus 681 ~~~~I~~ai~~gR~i~~nI~k~i~~~ 706 (902)
T PRK10517 681 SLMVLEEGVIEGRRTFANMLKYIKMT 706 (902)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 44889999966666 555554
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-85 Score=802.98 Aligned_cols=629 Identities=19% Similarity=0.224 Sum_probs=483.1
Q ss_pred cccCCCCCCCceeecCCCcchhhhHHHHHHHH-hhHHHHHHHHHHHHhcccCCCCCCcchhhhHHHHHHHHHHHHHHHHH
Q 002391 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQF-NRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (928)
Q Consensus 47 ~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf-~~~~~~~~l~~~il~~i~~~~~~~~~~~~~l~~vl~~~~~~~~~~d~ 125 (928)
..+|+++||.|.++.++.+.++ +.|++|| ++|++++++++++++++. ..|...++ ++++++++++..+++++
T Consensus 30 v~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~~---g~~~~~~~-i~~~i~~~~~i~~~qe~ 102 (884)
T TIGR01522 30 ASHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVFM---GNIDDAVS-ITLAILIVVTVGFVQEY 102 (884)
T ss_pred HHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHHH---cchhhHHH-HHhHHHHHHHHHHHHHH
Confidence 3557889999999988765443 8899999 999999999999999874 34444444 44555667778889999
Q ss_pred HHhhhhhhhc---cceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcceee
Q 002391 126 RRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVK 202 (928)
Q Consensus 126 ~r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K 202 (928)
+..++.+.+. ..+++|+ |||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.|
T Consensus 103 ~a~~~l~~L~~l~~~~~~Vi-Rdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~K 177 (884)
T TIGR01522 103 RSEKSLEALNKLVPPECHLI-REGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVSK 177 (884)
T ss_pred HHHHHHHHHhccCCCeeEEE-ECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCcceec
Confidence 9888877665 4789999 89999999999999999999999999999999999543 89999999999999999
Q ss_pred ecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcceeee
Q 002391 203 RAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ 282 (928)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~~ 282 (928)
.+++..... .....+.....|+||.+.+|. +.++|++||.+|.+++
T Consensus 178 ~~~~~~~~~-------------~~~~~~~~n~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~gk 223 (884)
T TIGR01522 178 VTAPIPAAT-------------NGDLAERSNIAFMGTLVRCGH---------------------GKGIVVGTGSNTEFGA 223 (884)
T ss_pred ccccccccc-------------cccccccCceEEeCCEEEeee---------------------EEEEEEEecCccHHHH
Confidence 986532100 000111222345555555555 9999999999997665
Q ss_pred c---CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHH
Q 002391 283 N---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTA 359 (928)
Q Consensus 283 ~---~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (928)
. .......++++++.++++..++.++.++++++.+++.++ .. ..| ...+..+
T Consensus 224 i~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~----~~~--------------------~~~~~~~ 278 (884)
T TIGR01522 224 VFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-QG----KDW--------------------LEMFTIS 278 (884)
T ss_pred HHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc----CCH--------------------HHHHHHH
Confidence 4 345556689999999999998877665555444433221 11 012 2477888
Q ss_pred HHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEEEEc
Q 002391 360 LILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVA 439 (928)
Q Consensus 360 i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~i~ 439 (928)
+++++.+|||+||++++++...++.++ +++++++|+++.+|+||++++||||||||||+|+|+|.+++..
T Consensus 279 v~llv~aiP~~Lp~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~ 348 (884)
T TIGR01522 279 VSLAVAAIPEGLPIIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTS 348 (884)
T ss_pred HHHHHHHccchHHHHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEec
Confidence 999999999999999999999999888 8999999999999999999999999999999999999999875
Q ss_pred CcccCC-CchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCCCCC
Q 002391 440 GTAYGV-SPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEP 518 (928)
Q Consensus 440 ~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (928)
+..+.. .... . ........++. . ....
T Consensus 349 ~~~~~~~~~~~---------------------------------~-------------~~~~~~~~~~~-~-----~~~~ 376 (884)
T TIGR01522 349 DGLHTMLNAVS---------------------------------L-------------NQFGEVIVDGD-V-----LHGF 376 (884)
T ss_pred CceEeeccCCc---------------------------------c-------------CCCCccccccc-c-----cccc
Confidence 532210 0000 0 00000000000 0 0011
Q ss_pred ChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEE
Q 002391 519 NVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598 (928)
Q Consensus 519 ~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il 598 (928)
.+..+.+++.+.++||+......+ + ...+||+|.||+++++..|+.. ....|+.+
T Consensus 377 ~~~~~~~~l~~~~l~~~~~~~~~~--~---~~~g~p~e~All~~~~~~~~~~--------------------~~~~~~~~ 431 (884)
T TIGR01522 377 YTVAVSRILEAGNLCNNAKFRNEA--D---TLLGNPTDVALIELLMKFGLDD--------------------LRETYIRV 431 (884)
T ss_pred cCHHHHHHHHHHhhhCCCeecCCC--C---CcCCChHHHHHHHHHHHcCcHh--------------------HHhhCcEE
Confidence 223456788889999988653221 1 1237999999999999887531 12457788
Q ss_pred EeecCCCCCceeEEEEEcC-CCcEEEEEccchhhhHHhhccc----c------cccHHHHHHHHHHHHhcCCeEEEEEEE
Q 002391 599 NLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKN----G------RMYEEATTKLLNEYGEAGLRTLALAYK 667 (928)
Q Consensus 599 ~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~----~------~~~~~~~~~~~~~~~~~Glr~l~~A~k 667 (928)
+.+||+|.||||+++++.+ ++++++|+|||||.|+.+|+.- + ++.++.+.+++++++.+|+||+++|||
T Consensus 432 ~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~ 511 (884)
T TIGR01522 432 AEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASG 511 (884)
T ss_pred eEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEE
Confidence 9999999999999999864 5788999999999999999741 1 123456778889999999999999998
Q ss_pred eCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhh
Q 002391 668 QLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (928)
Q Consensus 668 ~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~t 747 (928)
++ +.+|+|+|+++++|++|++++++|+.|+++||+++|+|||+..|
T Consensus 512 ~~----------------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~t 557 (884)
T TIGR01522 512 PE----------------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQET 557 (884)
T ss_pred cC----------------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 65 25899999999999999999999999999999999999999999
Q ss_pred HHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHH
Q 002391 748 AINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKH 827 (928)
Q Consensus 748 a~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~ 827 (928)
|.++|+++||...... +++|.++...-++++.+
T Consensus 558 A~~ia~~~Gi~~~~~~-----------------------------------------------~v~g~~l~~~~~~~l~~ 590 (884)
T TIGR01522 558 AVSIARRLGMPSKTSQ-----------------------------------------------SVSGEKLDAMDDQQLSQ 590 (884)
T ss_pred HHHHHHHcCCCCCCCc-----------------------------------------------eeEhHHhHhCCHHHHHH
Confidence 9999999999754322 35666666554444433
Q ss_pred HHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEec--CCchhHHHHhCceecccc
Q 002391 828 HFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQIVLSGHDMRKCI 905 (928)
Q Consensus 828 ~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~--g~e~~~a~~aaD~v~~~~ 905 (928)
... +..||||++|+||..+|+.+|+ .|+.|+|+|||.||++||++|||||+|+ |++. |+.+||+++..+
T Consensus 591 ~~~------~~~Vfar~~P~~K~~iv~~lq~-~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v--a~~aaDivl~dd 661 (884)
T TIGR01522 591 IVP------KVAVFARASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV--AKEAADMILTDD 661 (884)
T ss_pred Hhh------cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHHhCCeeEecCCCcCHH--HHHhcCEEEcCC
Confidence 322 3569999999999999999998 7999999999999999999999999995 3444 789999998754
Q ss_pred c----ccccccchhhHHHHhHH
Q 002391 906 Q----VFAFDIADCSLKIAKFA 923 (928)
Q Consensus 906 ~----~~~~~~~~~~~~~i~~~ 923 (928)
+ +.++++||++.++||-+
T Consensus 662 ~~~~i~~~i~~gR~~~~ni~k~ 683 (884)
T TIGR01522 662 DFATILSAIEEGKGIFNNIKNF 683 (884)
T ss_pred CHHHHHHHHHHHHHHHHHHHHH
Confidence 4 44899999977776543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-85 Score=803.02 Aligned_cols=622 Identities=19% Similarity=0.226 Sum_probs=472.2
Q ss_pred cccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhccc--CCC------CCCcchhhhHHHHHHHHHH
Q 002391 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LSP------FSPVSMLLPLAIVVGVSMA 118 (928)
Q Consensus 47 ~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~--~~~------~~~~~~~~~l~~vl~~~~~ 118 (928)
..+|+++||.|.++.++...++ +.|++||++|+.+.++++++++++. +.+ .+|... +.++++++++.+
T Consensus 51 a~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~-~iI~~~v~l~~~ 126 (903)
T PRK15122 51 AAERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGV-IIILTMVLLSGL 126 (903)
T ss_pred HHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHH-HHHHHHHHHHHH
Confidence 3457889999999988866443 7899999999999999999999874 111 133334 445577778888
Q ss_pred HHHHHHHHHhhhhhhhc---cceEEEEeCC------ceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEE
Q 002391 119 KEALEDWRRFMQDKEVN---ARKVSVHVGN------GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVE 189 (928)
Q Consensus 119 ~~~~~d~~r~k~~~~~n---~~~~~V~~r~------g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vd 189 (928)
.+++++++..++.+.+. ..+++|+ || |++++|++++|+|||||.|++||.|||||+|+++++ +.||
T Consensus 127 i~~~qe~~a~~a~~~L~~l~~~~~~V~-Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VD 201 (903)
T PRK15122 127 LRFWQEFRSNKAAEALKAMVRTTATVL-RRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFIS 201 (903)
T ss_pred HHHHHHHHHHHHHHHHHhccCCceEEE-ECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEE
Confidence 99999999888766554 4789999 67 589999999999999999999999999999999543 7999
Q ss_pred eecCCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEE
Q 002391 190 TMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYG 269 (928)
Q Consensus 190 es~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g 269 (928)
||+|||||.|+.|.+......... .+... +......+..|+++.||.+.+ |.+.+
T Consensus 202 ES~LTGES~PV~K~~~~~~~~~~~-------~~~~~-----------------~~~~~~~~~~n~vfaGT~V~~-G~~~~ 256 (903)
T PRK15122 202 QAVLTGEALPVEKYDTLGAVAGKS-------ADALA-----------------DDEGSLLDLPNICFMGTNVVS-GTATA 256 (903)
T ss_pred ccccCCCCcceeeecccccccccc-------ccccc-----------------cccCCcccccceEEeCCEEEe-eeEEE
Confidence 999999999999986311000000 00000 000011223344444444442 34999
Q ss_pred EEEEecCcceeeecCCC--CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCC
Q 002391 270 SVIFTGHDSKVMQNATT--SPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGK 347 (928)
Q Consensus 270 vVv~tG~~Tki~~~~~~--~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (928)
+|+.||.+|.+++.... .+..++++++.++++..++..+.++++.+.+++..+... .|
T Consensus 257 ~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~-----~~--------------- 316 (903)
T PRK15122 257 VVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKG-----DW--------------- 316 (903)
T ss_pred EEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC-----CH---------------
Confidence 99999999987654431 144568999999999988877776666555444322110 12
Q ss_pred CchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCcee
Q 002391 348 PLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLT 427 (928)
Q Consensus 348 ~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT 427 (928)
...|.+++.+++.+|||+||++++++...++.++ +++++++|+++.+|+||++++||||||||||
T Consensus 317 -----~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT 381 (903)
T PRK15122 317 -----LEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMDVLCTDKTGTLT 381 (903)
T ss_pred -----HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCcEEEecCCcccc
Confidence 2477888999999999999999999999988888 8899999999999999999999999999999
Q ss_pred eceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccch
Q 002391 428 CNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDS 507 (928)
Q Consensus 428 ~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (928)
+|+|++.+++..+.. .
T Consensus 382 ~~~m~V~~~~~~~~~---~------------------------------------------------------------- 397 (903)
T PRK15122 382 QDRIILEHHLDVSGR---K------------------------------------------------------------- 397 (903)
T ss_pred cCeEEEEEEEcCCCC---C-------------------------------------------------------------
Confidence 999999986521100 0
Q ss_pred hhcccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCC
Q 002391 508 RLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPK 587 (928)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~ 587 (928)
. .+++...++|... + . ..+||.|.|+++++.+.|...
T Consensus 398 ------------~---~~~l~~a~l~s~~--~--~-------~~~~p~e~All~~a~~~~~~~----------------- 434 (903)
T PRK15122 398 ------------D---ERVLQLAWLNSFH--Q--S-------GMKNLMDQAVVAFAEGNPEIV----------------- 434 (903)
T ss_pred ------------h---HHHHHHHHHhCCC--C--C-------CCCChHHHHHHHHHHHcCchh-----------------
Confidence 0 0122222332111 0 0 147999999999998866421
Q ss_pred CCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhccc---c------cccHHHHHHHHHHHHhcC
Q 002391 588 GQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---G------RMYEEATTKLLNEYGEAG 658 (928)
Q Consensus 588 ~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~------~~~~~~~~~~~~~~~~~G 658 (928)
....|+.+..+||++.||||++++++.+|++++++||||+.|+++|+.- + ++.++.+.+.+++++.+|
T Consensus 435 ---~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G 511 (903)
T PRK15122 435 ---KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADG 511 (903)
T ss_pred ---hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCC
Confidence 0234667888999999999999999878889999999999999999741 1 123456777889999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEE
Q 002391 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (928)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~ 738 (928)
+|++++|||+++.++..++ ..+..|+||+|+|+++++|++|++++++|+.|+++||+|+
T Consensus 512 ~rvlavA~k~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~ 570 (903)
T PRK15122 512 FRVLLVATREIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVK 570 (903)
T ss_pred CEEEEEEEeccCccccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEE
Confidence 9999999999865432110 0023478999999999999999999999999999999999
Q ss_pred EEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhh
Q 002391 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (928)
Q Consensus 739 mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 818 (928)
|+|||++.||.+||+++||... -+++|.+++
T Consensus 571 miTGD~~~tA~aIA~~lGI~~~-------------------------------------------------~vi~G~el~ 601 (903)
T PRK15122 571 VLTGDNPIVTAKICREVGLEPG-------------------------------------------------EPLLGTEIE 601 (903)
T ss_pred EECCCCHHHHHHHHHHcCCCCC-------------------------------------------------CccchHhhh
Confidence 9999999999999999999421 156777777
Q ss_pred HhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEec-CCchhHHHHh
Q 002391 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQIVLS 897 (928)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~-g~e~~~a~~a 897 (928)
.+.++++..... +..||||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ |++. |+++
T Consensus 602 ~~~~~el~~~v~------~~~VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdv--Akea 672 (903)
T PRK15122 602 AMDDAALAREVE------ERTVFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDADVGISVDSGADI--AKES 672 (903)
T ss_pred hCCHHHHHHHhh------hCCEEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCCEEEEeCcccHH--HHHh
Confidence 665554444332 2349999999999999999998 7999999999999999999999999996 4555 8999
Q ss_pred Cceeccccc----ccccccchhhHHH-HhHHhhh
Q 002391 898 GHDMRKCIQ----VFAFDIADCSLKI-AKFATFC 926 (928)
Q Consensus 898 aD~v~~~~~----~~~~~~~~~~~~~-i~~~~~~ 926 (928)
||+|+..++ +.++++||++.++ .||++|.
T Consensus 673 ADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ 706 (903)
T PRK15122 673 ADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMT 706 (903)
T ss_pred cCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988665 4499999997664 4666653
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-85 Score=800.03 Aligned_cols=605 Identities=19% Similarity=0.215 Sum_probs=471.2
Q ss_pred cccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCCcchhhhHHHHHHHHHHHHHHHHHH
Q 002391 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126 (928)
Q Consensus 47 ~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~~~~~~~~~~~~~l~~vl~~~~~~~~~~d~~ 126 (928)
..+|+++||.|.++.++.+.++ +.|++||+.|++++++++++++++. +.+...+.++++++++.+...+++++
T Consensus 39 v~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~p~~~iL~~~a~ls~~~----~~~~~~~iI~~iv~~~~~i~~~~e~~ 111 (867)
T TIGR01524 39 VTERLAEFGPNQTVEEKKVPNL---RLLIRAFNNPFIYILAMLMGVSYLT----DDLEATVIIALMVLASGLLGFIQESR 111 (867)
T ss_pred HHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhHHHHHHHHHHHHHHHH----hhHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3567889999999998865443 8899999999999999999999873 33444444567777888888899988
Q ss_pred Hhhhhhhh---ccceEEEEeC------CceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCC
Q 002391 127 RFMQDKEV---NARKVSVHVG------NGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGET 197 (928)
Q Consensus 127 r~k~~~~~---n~~~~~V~~r------~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs 197 (928)
..++...+ ...+++|+ | ||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||
T Consensus 112 a~ka~~~L~~l~~~~~~V~-R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGES 186 (867)
T TIGR01524 112 AERAAYALKNMVKNTATVL-RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGES 186 (867)
T ss_pred HHHHHHHHhhhccCeeEEE-EecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCCC
Confidence 87765544 45789999 7 8999999999999999999999999999999999543 799999999999
Q ss_pred cceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCc
Q 002391 198 NLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHD 277 (928)
Q Consensus 198 ~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~ 277 (928)
.|+.|.+++.... . .+..+.....|+||.+.+|. +.++|++||.+
T Consensus 187 ~PV~K~~~~~~~~---~-----------~~~~~~~n~vfaGT~v~~G~---------------------~~~~V~~tG~~ 231 (867)
T TIGR01524 187 LPVEKFVEDKRAR---D-----------PEILERENLCFMGTNVLSGH---------------------AQAVVLATGSS 231 (867)
T ss_pred CcccccCCccccc---c-----------ccccccccceecCCeEEEeE---------------------EEEEEEEEcCc
Confidence 9999998653200 0 00001112345566555555 99999999999
Q ss_pred ceeeecC---CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHH
Q 002391 278 SKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLA 354 (928)
Q Consensus 278 Tki~~~~---~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (928)
|.+++.. .. +..++++++.++++..++..+.++++++.++++.+... .| ..
T Consensus 232 T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~-----~~--------------------~~ 285 (867)
T TIGR01524 232 TWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG-----DW--------------------LE 285 (867)
T ss_pred cHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC-----CH--------------------HH
Confidence 9775543 34 45578999999999999988888888776655432111 12 24
Q ss_pred HHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEE
Q 002391 355 HLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL 434 (928)
Q Consensus 355 ~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~ 434 (928)
.|..++++++.+|||+||++++++...++.++ +++++++|+++.+|.||++++||||||||||+|+|++.
T Consensus 286 ~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~ 355 (867)
T TIGR01524 286 AFLFALAVAVGLTPEMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELE 355 (867)
T ss_pred HHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEE
Confidence 77888999999999999999999999998888 88999999999999999999999999999999999998
Q ss_pred EEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCC
Q 002391 435 KCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNW 514 (928)
Q Consensus 435 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (928)
+++... ..
T Consensus 356 ~~~~~~----~~-------------------------------------------------------------------- 363 (867)
T TIGR01524 356 KHIDSS----GE-------------------------------------------------------------------- 363 (867)
T ss_pred EEecCC----CC--------------------------------------------------------------------
Confidence 863110 00
Q ss_pred CCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeE
Q 002391 515 LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVERE 594 (928)
Q Consensus 515 ~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~ 594 (928)
. ..+++...++|+... ...+||.|.|+++++....... ....
T Consensus 364 ----~---~~~~l~~a~l~~~~~-----------~~~~~p~~~Al~~~~~~~~~~~--------------------~~~~ 405 (867)
T TIGR01524 364 ----T---SERVLKMAWLNSYFQ-----------TGWKNVLDHAVLAKLDESAARQ--------------------TASR 405 (867)
T ss_pred ----C---HHHHHHHHHHhCCCC-----------CCCCChHHHHHHHHHHhhchhh--------------------Hhhc
Confidence 0 012333333332210 0136999999999987532100 1245
Q ss_pred EEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhccc---c------cccHHHHHHHHHHHHhcCCeEEEEE
Q 002391 595 FKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---G------RMYEEATTKLLNEYGEAGLRTLALA 665 (928)
Q Consensus 595 ~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~------~~~~~~~~~~~~~~~~~Glr~l~~A 665 (928)
|+.++.+||+|+||||+++++++++..++++||||+.|+++|+.. + ++.++.+.+.+++++.+|+|++++|
T Consensus 406 ~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA 485 (867)
T TIGR01524 406 WKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVA 485 (867)
T ss_pred CceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 677888999999999999998776678999999999999999741 1 1234567788899999999999999
Q ss_pred EEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCch
Q 002391 666 YKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (928)
Q Consensus 666 ~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~ 745 (928)
||+++.++.. + .+..|++|+|+|+++++|++|++++++|++|+++||+++|+|||+.
T Consensus 486 ~~~~~~~~~~-~----------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~ 542 (867)
T TIGR01524 486 TKTLKVGEAD-F----------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNE 542 (867)
T ss_pred EeccCccccc-c----------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCH
Confidence 9998654310 0 0123689999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHH
Q 002391 746 ETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDM 825 (928)
Q Consensus 746 ~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~ 825 (928)
.||.+||+++||...+ +++|.+++..-++++
T Consensus 543 ~tA~aIA~~lGI~~~~-------------------------------------------------v~~g~~l~~~~~~el 573 (867)
T TIGR01524 543 IVTARICQEVGIDAND-------------------------------------------------FLLGADIEELSDEEL 573 (867)
T ss_pred HHHHHHHHHcCCCCCC-------------------------------------------------eeecHhhhhCCHHHH
Confidence 9999999999995321 455666655444433
Q ss_pred HHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecC-CchhHHHHhCceeccc
Q 002391 826 KHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG-VEGMQIVLSGHDMRKC 904 (928)
Q Consensus 826 ~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g-~e~~~a~~aaD~v~~~ 904 (928)
..... +..+|||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||++ ++. |+++||+++..
T Consensus 574 ~~~~~------~~~vfAr~~Pe~K~~iV~~lq~-~G~vVam~GDGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLld 644 (867)
T TIGR01524 574 ARELR------KYHIFARLTPMQKSRIIGLLKK-AGHTVGFLGDGINDAPALRKADVGISVDTAADI--AKEASDIILLE 644 (867)
T ss_pred HHHhh------hCeEEEECCHHHHHHHHHHHHh-CCCEEEEECCCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEec
Confidence 33222 2459999999999999999998 79999999999999999999999999963 444 89999999875
Q ss_pred cc----ccccccchhhHHHH-hHHhh
Q 002391 905 IQ----VFAFDIADCSLKIA-KFATF 925 (928)
Q Consensus 905 ~~----~~~~~~~~~~~~~i-~~~~~ 925 (928)
++ +.++++||++.++| ||++|
T Consensus 645 d~~~~I~~ai~~gR~i~~ni~k~i~~ 670 (867)
T TIGR01524 645 KSLMVLEEGVIEGRNTFGNILKYLKM 670 (867)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55 44899999977666 44444
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-84 Score=782.01 Aligned_cols=580 Identities=20% Similarity=0.239 Sum_probs=469.2
Q ss_pred ccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 002391 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127 (928)
Q Consensus 48 ~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~~~~~~~~~~~~~l~~vl~~~~~~~~~~d~~r 127 (928)
.+++++||.|.++..+.++| +.|++||+.|+++.++++++++++. ..|...+ .++++++++++.+++++++.
T Consensus 8 ~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~---~~~~~~~-~i~~~~~i~~~i~~~qe~~a 79 (755)
T TIGR01647 8 KKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIAL---ENWVDFV-IILGLLLLNATIGFIEENKA 79 (755)
T ss_pred HHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh---cchhhhh-hhhhhhHHHHHHHHHHHHHH
Confidence 45778999999998666544 7889999999999999999999884 3444444 45577778888899999998
Q ss_pred hhhhhhhc---cceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcceeeec
Q 002391 128 FMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRA 204 (928)
Q Consensus 128 ~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~ 204 (928)
.++.+.+. ..+++|+ |||++++|+.++|+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.|.+
T Consensus 80 ~~~~~~L~~~~~~~~~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K~~ 154 (755)
T TIGR01647 80 GNAVEALKQSLAPKARVL-RDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTKKT 154 (755)
T ss_pred HHHHHHHHhhCCCeEEEE-ECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEecc
Confidence 88766554 5789999 89999999999999999999999999999999999332 8999999999999999988
Q ss_pred ccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcceeee--
Q 002391 205 MEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ-- 282 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~~-- 282 (928)
++.. |+||.+.+|. +.++|+.||.+|.+++
T Consensus 155 ~~~v---------------------------~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~i~ 186 (755)
T TIGR01647 155 GDIA---------------------------YSGSTVKQGE---------------------AEAVVTATGMNTFFGKAA 186 (755)
T ss_pred CCee---------------------------eccCEEEccE---------------------EEEEEEEcCCccHHHHHH
Confidence 6544 9999999988 9999999999997655
Q ss_pred -cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHH
Q 002391 283 -NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALI 361 (928)
Q Consensus 283 -~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 361 (928)
....++..++++|+.++++..+++++.++++++.++++.+.... .| ...+.+++.
T Consensus 187 ~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~----~~--------------------~~~~~~~i~ 242 (755)
T TIGR01647 187 ALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE----SF--------------------REGLQFALV 242 (755)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CH--------------------HHHHHHHHH
Confidence 44456666799999999999999988888887776665431111 12 247788999
Q ss_pred HhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEEEEcCc
Q 002391 362 LYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGT 441 (928)
Q Consensus 362 ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~i~~~ 441 (928)
+++.+|||+||++++++...++.++ +++++++|+++.+|.||.+++||||||||||+|+|+|.+++..+.
T Consensus 243 vlv~a~P~~Lp~~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~ 312 (755)
T TIGR01647 243 LLVGGIPIAMPAVLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFN 312 (755)
T ss_pred HHHHhCCcchHHHHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCC
Confidence 9999999999999999999999888 899999999999999999999999999999999999999875421
Q ss_pred ccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCCCCCChH
Q 002391 442 AYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVD 521 (928)
Q Consensus 442 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (928)
.+ +
T Consensus 313 ~~----~------------------------------------------------------------------------- 315 (755)
T TIGR01647 313 GF----D------------------------------------------------------------------------- 315 (755)
T ss_pred CC----C-------------------------------------------------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEee
Q 002391 522 TLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLL 601 (928)
Q Consensus 522 ~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~ 601 (928)
..+++...++|+.. .++||.|.|+++++++.+. ....|++++.+
T Consensus 316 -~~~~l~~a~~~~~~-------------~~~~pi~~Ai~~~~~~~~~----------------------~~~~~~~~~~~ 359 (755)
T TIGR01647 316 -KDDVLLYAALASRE-------------EDQDAIDTAVLGSAKDLKE----------------------ARDGYKVLEFV 359 (755)
T ss_pred -HHHHHHHHHHhCCC-------------CCCChHHHHHHHHHHHhHH----------------------HHhcCceEEEe
Confidence 01234444555421 1479999999999876430 12456778899
Q ss_pred cCCCCCceeEEEEEcCC-CcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHH
Q 002391 602 DFTSKRKRMSVIVRDED-GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSE 680 (928)
Q Consensus 602 ~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~ 680 (928)
||++.+|+|++++++++ |+.++++||||+.|+++|+... ..++.+.+.+++++.+|+|++++|||+.
T Consensus 360 pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~-~~~~~~~~~~~~~~~~G~rvl~vA~~~~----------- 427 (755)
T TIGR01647 360 PFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKK-EIEEKVEEKVDELASRGYRALGVARTDE----------- 427 (755)
T ss_pred ccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEEEcC-----------
Confidence 99999999999998764 7888999999999999997532 3456778888999999999999999721
Q ss_pred HHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccccc
Q 002391 681 FQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQ 760 (928)
Q Consensus 681 ~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~ 760 (928)
|.+|+|+|+++++|++|++++++|+.|+++||+++|+|||++.||.++|+++||...
T Consensus 428 -----------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~ 484 (755)
T TIGR01647 428 -----------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN 484 (755)
T ss_pred -----------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC
Confidence 368999999999999999999999999999999999999999999999999999542
Q ss_pred CceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeE
Q 002391 761 GMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVI 840 (928)
Q Consensus 761 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v 840 (928)
. + .+ +. +.+|..++...++++.+... . ..+
T Consensus 485 ~---~--~~---~~------------------------------------l~~~~~~~~~~~~~~~~~~~----~--~~v 514 (755)
T TIGR01647 485 I---Y--TA---DV------------------------------------LLKGDNRDDLPSGELGEMVE----D--ADG 514 (755)
T ss_pred C---c--CH---HH------------------------------------hcCCcchhhCCHHHHHHHHH----h--CCE
Confidence 1 0 00 00 11222222222222222222 2 349
Q ss_pred EEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecC-CchhHHHHhCceeccccc----ccccccchh
Q 002391 841 CCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG-VEGMQIVLSGHDMRKCIQ----VFAFDIADC 915 (928)
Q Consensus 841 ~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g-~e~~~a~~aaD~v~~~~~----~~~~~~~~~ 915 (928)
|||++|+||.++|+.+|+ .|++|+|+|||.||+|+|++|||||+|++ ++. |+++||+++..++ +.++++||+
T Consensus 515 fAr~~Pe~K~~iV~~lq~-~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdv--AkeaADivLl~d~l~~I~~ai~~gR~ 591 (755)
T TIGR01647 515 FAEVFPEHKYEIVEILQK-RGHLVGMTGDGVNDAPALKKADVGIAVAGATDA--ARSAADIVLTEPGLSVIVDAILESRK 591 (755)
T ss_pred EEecCHHHHHHHHHHHHh-cCCEEEEEcCCcccHHHHHhCCeeEEecCCcHH--HHHhCCEEEEcCChHHHHHHHHHHHH
Confidence 999999999999999998 79999999999999999999999999963 344 9999999988665 458999999
Q ss_pred hHHHHhHH
Q 002391 916 SLKIAKFA 923 (928)
Q Consensus 916 ~~~~i~~~ 923 (928)
+.++||-+
T Consensus 592 ~~~ni~k~ 599 (755)
T TIGR01647 592 IFQRMKSY 599 (755)
T ss_pred HHHHHHHH
Confidence 88888754
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-81 Score=706.59 Aligned_cols=709 Identities=21% Similarity=0.257 Sum_probs=509.2
Q ss_pred cCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHh
Q 002391 49 KRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRF 128 (928)
Q Consensus 49 ~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~~~~~~~~~~~~~l~~vl~~~~~~~~~~d~~r~ 128 (928)
.++.-||.|.|..+..+.+ ..|+.+-.+|+++|..+..++|.. .+++.+...++++-+.+++...+|..+..
T Consensus 168 ~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~----d~Y~~YA~cI~iisv~Si~~sv~e~r~qs 239 (1140)
T KOG0208|consen 168 DRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLA----DSYYYYAFCIVIISVYSIVLSVYETRKQS 239 (1140)
T ss_pred hHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhc----ccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3567799999999998877 789999999999999999888887 56667777677777888888888888887
Q ss_pred hhhhhhcc--ceEEEEeCCceEEEeecccCCcCcEEEecc-CCcCCceEEEEeecCCCceEEEEeecCCCCCcceeeecc
Q 002391 129 MQDKEVNA--RKVSVHVGNGVFSYKPWEKIQVGDIVKVEK-DQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAM 205 (928)
Q Consensus 129 k~~~~~n~--~~~~V~~r~g~~~~i~~~~L~vGDII~l~~-ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~ 205 (928)
+..+.+-. ..|+|+ |+|.|++|.+++|+||||+.+.+ +-..|||++|++ |.|.||||+|||||.|+.|.|.
T Consensus 240 ~rlr~mv~~~~~V~V~-R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~-----g~civNEsmLTGESVPv~K~~l 313 (1140)
T KOG0208|consen 240 IRLRSMVKFTCPVTVI-RDGFWETVDSSELVPGDILYIPPPGKIMPCDALLIS-----GDCIVNESMLTGESVPVTKTPL 313 (1140)
T ss_pred HHHHHHhcCCceEEEE-ECCEEEEEeccccccccEEEECCCCeEeecceEEEe-----CcEEeecccccCCcccccccCC
Confidence 77777765 468899 89999999999999999999998 999999999999 8899999999999999999998
Q ss_pred cccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcceeeecCC
Q 002391 206 EATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNAT 285 (928)
Q Consensus 206 ~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~~~~~ 285 (928)
+.-... +.-.+.+...+.....|.||.++.-+.. -.+.+.|+|++||..|.-++..+
T Consensus 314 ~~~~~~--------~~~~~~~~~~~~rh~lfcGT~vlq~r~~---------------~g~~v~a~V~RTGF~T~KGqLVR 370 (1140)
T KOG0208|consen 314 PMGTDS--------LDSITISMSTNSRHTLFCGTKVLQARAY---------------LGGPVLAMVLRTGFSTTKGQLVR 370 (1140)
T ss_pred cccccc--------CcCeeechhhcCcceeeccceEEEeecC---------------CCCceEEEEEeccccccccHHHH
Confidence 621100 1111333333445566888877743210 12348999999999997777666
Q ss_pred CCC-CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhh
Q 002391 286 TSP-SKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYG 364 (928)
Q Consensus 286 ~~~-~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~ 364 (928)
.-- .|..+++-+-|.+. ++.++.+++++.++...+..... + ...-..+++++.++.
T Consensus 371 silyPkP~~fkfyrds~~--fi~~l~~ia~~gfiy~~i~l~~~-------g--------------~~~~~iiirsLDliT 427 (1140)
T KOG0208|consen 371 SILYPKPVNFKFYRDSFK--FILFLVIIALIGFIYTAIVLNLL-------G--------------VPLKTIIIRSLDLIT 427 (1140)
T ss_pred hhcCCCCcccHHHHHHHH--HHHHHHHHHHHHHHHHhHhHHHc-------C--------------CCHHHHhhhhhcEEE
Confidence 422 22233333333332 22233334444444333322111 0 111247888999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEEEEcCcccC
Q 002391 365 YLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYG 444 (928)
Q Consensus 365 ~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~ 444 (928)
..+|.+||.++++.....-.++ ++++|.|-+++.+...|+++.+|||||||||++.+.+..+..-...-.
T Consensus 428 i~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~ 497 (1140)
T KOG0208|consen 428 IVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVD 497 (1140)
T ss_pred EecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecccccc
Confidence 9999999999999988888888 899999999999999999999999999999999999998865321100
Q ss_pred CCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCCCCCChHHHH
Q 002391 445 VSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLL 524 (928)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (928)
.. .+.. .. . +. . ...+. ++ .-+.......
T Consensus 498 ~~-~~~~--~~----------~---~~-------~---------------------~~~~~--~l-----~~~~~~~~~~ 526 (1140)
T KOG0208|consen 498 DG-PELK--VV----------T---ED-------S---------------------LQLFY--KL-----SLRSSSLPMG 526 (1140)
T ss_pred cc-chhh--hh----------h---hh-------h---------------------cccee--ec-----cccccCCchH
Confidence 00 0000 00 0 00 0 00000 00 0001111234
Q ss_pred HHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEc--------CCe---EEEEecCC---CCCCC
Q 002391 525 LFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRT--------QSS---VFIRERYP---PKGQP 590 (928)
Q Consensus 525 ~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~--------~~~---~~i~~~~~---~~~~~ 590 (928)
.|..++|.||+....... ..++|.|.-+.+ ..||.+.+.. .++ ..++.+.+ ...+.
T Consensus 527 ~~~~a~atCHSL~~v~g~-------l~GDPLdlkmfe---~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~ 596 (1140)
T KOG0208|consen 527 NLVAAMATCHSLTLVDGT-------LVGDPLDLKMFE---STGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTEC 596 (1140)
T ss_pred HHHHHHhhhceeEEeCCe-------eccCceeeeeee---ccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcC
Confidence 788999999988654321 136888877665 4667764421 011 11211111 00111
Q ss_pred ceeEEEEEEeecCCCCCceeEEEEEcC-CCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEEeC
Q 002391 591 VEREFKILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQL 669 (928)
Q Consensus 591 ~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l 669 (928)
....+-+++.+||+|..+||||||.++ +.+.++|+|||||.|.+.|.++. +++.+.+.++.|+.+|+|++++|+|.+
T Consensus 597 ~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~t--vP~dy~evl~~Yt~~GfRVIAlA~K~L 674 (1140)
T KOG0208|consen 597 GEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPET--VPADYQEVLKEYTHQGFRVIALASKEL 674 (1140)
T ss_pred CCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCccc--CCccHHHHHHHHHhCCeEEEEEecCcc
Confidence 123799999999999999999999986 47799999999999999999764 788999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHH
Q 002391 670 DESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (928)
Q Consensus 670 ~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~ 749 (928)
+.. .|.+..+ ..| +.+|.||+|+|++.+|++||+.++.+|+.|.+|+|+++|+|||+..||+
T Consensus 675 ~~~---~~~~~~~-------~~R--------d~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTai 736 (1140)
T KOG0208|consen 675 ETS---TLQKAQK-------LSR--------DTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAI 736 (1140)
T ss_pred Ccc---hHHHHhh-------ccH--------hhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheee
Confidence 876 4443221 244 6789999999999999999999999999999999999999999999999
Q ss_pred HHHHHccccccCceEEEEeCCCcc-hHHHHHHHHHHhhHH-----HHHHHhhhhhh--ccCCCcCcEEEEEcCchhhHhh
Q 002391 750 NIGFACSLLRQGMKQICITALNSD-SVGKAAKEAVKDNIL-----MQITNASQMIK--LERDPHAAYALIIEGKTLAYAL 821 (928)
Q Consensus 750 ~ia~~~gii~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~lvi~G~~l~~~~ 821 (928)
.+|++||++.+...++...-...+ .....+.....++.. .+........+ ...-....+.+.++|+.+..+.
T Consensus 737 sVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~ 816 (1140)
T KOG0208|consen 737 SVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVIL 816 (1140)
T ss_pred ehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHH
Confidence 999999999988777655444221 100000000000000 00000000000 0111345688999999999888
Q ss_pred hHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCcee
Q 002391 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDM 901 (928)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v 901 (928)
.+..+.+.++...|. |||||+|.||+++|+.+|+ .|+.|+|||||+|||+||++||+||++|.+| |..||.|.
T Consensus 817 -~~~~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQk-l~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFT 889 (1140)
T KOG0208|consen 817 -EHFPELVPKILLKGT--VFARMSPDQKAELIEALQK-LGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFT 889 (1140)
T ss_pred -hhcHHHHHHHHhcCe--EEeecCchhHHHHHHHHHh-cCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccc
Confidence 344455555555554 9999999999999999999 7999999999999999999999999998888 89999999
Q ss_pred ccccc----ccccccchh
Q 002391 902 RKCIQ----VFAFDIADC 915 (928)
Q Consensus 902 ~~~~~----~~~~~~~~~ 915 (928)
.+.++ +..|+.+|+
T Consensus 890 Sk~~~I~cVp~vIrEGRa 907 (1140)
T KOG0208|consen 890 SKTPSISCVPDVIREGRA 907 (1140)
T ss_pred cCCCchhhHhHHHhhhhh
Confidence 99666 458899998
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-73 Score=663.31 Aligned_cols=515 Identities=19% Similarity=0.203 Sum_probs=407.9
Q ss_pred HHHHhhHHHHHHHHHHHHhccc-CCC------CCCcchh---hhHHHHHHHHHHHHHHHHHHHhhhhhhhcc----ceEE
Q 002391 75 FEQFNRVANIYFLIAALLSVTP-LSP------FSPVSML---LPLAIVVGVSMAKEALEDWRRFMQDKEVNA----RKVS 140 (928)
Q Consensus 75 ~~qf~~~~~~~~l~~~il~~i~-~~~------~~~~~~~---~~l~~vl~~~~~~~~~~d~~r~k~~~~~n~----~~~~ 140 (928)
..||++|..+.++++++++++. +.+ ..+...+ +.+++.+++..+.|.+.++|..++.+.+.+ .+++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 4588999999999999999864 111 1222222 233344445555666777777766655554 3689
Q ss_pred EEeCCce-EEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCchhhhcc
Q 002391 141 VHVGNGV-FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKE 219 (928)
Q Consensus 141 V~~r~g~-~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 219 (928)
|+ |+|+ +++|++++|++||+|.|++||.|||||++++ |.+.||||.|||||.|+.|.+++..
T Consensus 108 vi-r~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie-----G~a~VDESaLTGES~PV~K~~G~~~----------- 170 (679)
T PRK01122 108 KL-REPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE-----GVASVDESAITGESAPVIRESGGDF----------- 170 (679)
T ss_pred EE-ECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE-----ccEEEEcccccCCCCceEeCCCCcc-----------
Confidence 99 7777 9999999999999999999999999999999 6689999999999999999987541
Q ss_pred CcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcceeee---cCCCCCCCccHHHH
Q 002391 220 FTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEK 296 (928)
Q Consensus 220 ~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~ 296 (928)
...|+||.+.+|. +.+.|+.+|.+|.+.+ ..+.++.+++|+|+
T Consensus 171 -------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~ 216 (679)
T PRK01122 171 -------------SSVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPNEI 216 (679)
T ss_pred -------------CeEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHHHH
Confidence 0248999999887 9999999999996644 44566777899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHH
Q 002391 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIE 376 (928)
Q Consensus 297 ~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~ 376 (928)
.++.+...++.+.++++++.+.+ . ||... -..+...+++++.+|||+|+..++
T Consensus 217 al~~l~~~l~~i~l~~~~~~~~~-~----------~~~g~----------------~~~l~~~iallV~aiP~alg~l~~ 269 (679)
T PRK01122 217 ALTILLAGLTIIFLLVVATLPPF-A----------AYSGG----------------ALSITVLVALLVCLIPTTIGGLLS 269 (679)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHH-H----------HHhCc----------------hHHHHHHHHHHHHcccchhhhHHH
Confidence 88887666654433333222211 1 11100 125777888999999999999888
Q ss_pred HHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEEEEcCcccCCCchHHHHHHHH
Q 002391 377 IVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAK 456 (928)
Q Consensus 377 ~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~ 456 (928)
++...++.++ .++++++|+...+|.||++++||||||||||+|+|.+.+++..+..
T Consensus 270 ~i~i~g~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~-------------- 325 (679)
T PRK01122 270 AIGIAGMDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV-------------- 325 (679)
T ss_pred HHHHHHHHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC--------------
Confidence 8888888888 8999999999999999999999999999999999999887532100
Q ss_pred HhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCCCCCChHHHHHHHHHHhhccce
Q 002391 457 QMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTA 536 (928)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~ 536 (928)
..++++.+.++|+..
T Consensus 326 -----------------------------------------------------------------~~~~ll~~a~~~s~~ 340 (679)
T PRK01122 326 -----------------------------------------------------------------TEEELADAAQLSSLA 340 (679)
T ss_pred -----------------------------------------------------------------CHHHHHHHHHHhcCC
Confidence 011345556666443
Q ss_pred eecccCCCCceEEecCChhHHHHHHHHHH-CCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEE
Q 002391 537 IPELNEETGNLTYEAESPDEAAFLVAARE-FGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVR 615 (928)
Q Consensus 537 ~~~~~~~~~~~~~~~~sp~e~Al~~~a~~-~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~ 615 (928)
+.||...|++++|++ +++... ...++..+.+||++.+++|++.+.
T Consensus 341 --------------s~hP~~~AIv~~a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~~~ 386 (679)
T PRK01122 341 --------------DETPEGRSIVVLAKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVDLD 386 (679)
T ss_pred --------------CCCchHHHHHHHHHhhcCCCch--------------------hhccccceeEeecCcCceEEEEEC
Confidence 358999999999986 343210 112455678899999988887653
Q ss_pred cCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHH
Q 002391 616 DEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREAT 695 (928)
Q Consensus 616 ~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~ 695 (928)
| ..|+|||++.|++.|...+...++.+.+.+++++++|+|++++|+
T Consensus 387 ---g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~----------------------------- 432 (679)
T PRK01122 387 ---G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAE----------------------------- 432 (679)
T ss_pred ---C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEE-----------------------------
Confidence 3 589999999999999765555667788888999999999999993
Q ss_pred HHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchH
Q 002391 696 LEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV 775 (928)
Q Consensus 696 l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~ 775 (928)
|++++|+++++|++|++++++|++||++||+++|+|||++.||.+||+++|+..
T Consensus 433 ----------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~---------------- 486 (679)
T PRK01122 433 ----------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---------------- 486 (679)
T ss_pred ----------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE----------------
Confidence 568999999999999999999999999999999999999999999999999821
Q ss_pred HHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHH
Q 002391 776 GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRL 855 (928)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~ 855 (928)
+++|++|+||.++|+.
T Consensus 487 ----------------------------------------------------------------v~A~~~PedK~~iV~~ 502 (679)
T PRK01122 487 ----------------------------------------------------------------FLAEATPEDKLALIRQ 502 (679)
T ss_pred ----------------------------------------------------------------EEccCCHHHHHHHHHH
Confidence 7899999999999999
Q ss_pred HhhcCCCEEEEEcCCcccHHHHHhCCccEEec-CCchhHHHHhCceeccccc----ccccccchhhH
Q 002391 856 VKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQIVLSGHDMRKCIQ----VFAFDIADCSL 917 (928)
Q Consensus 856 l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~-g~e~~~a~~aaD~v~~~~~----~~~~~~~~~~~ 917 (928)
+|+ .|+.|+|+|||.||+|+|++|||||||+ |++. |+++||+++..++ +.+++++|++.
T Consensus 503 lQ~-~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~av~~GR~~~ 566 (679)
T PRK01122 503 EQA-EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIEVVEIGKQLL 566 (679)
T ss_pred HHH-cCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 998 7999999999999999999999999995 3444 9999999987555 44888998854
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-72 Score=656.54 Aligned_cols=519 Identities=17% Similarity=0.198 Sum_probs=392.4
Q ss_pred HHHhhHHHHHHHHHHHHhccc--CCC----CCC--cchhhhHHHHHHH---HHHHHHHHHHHHhhhhhhhcc---c-eEE
Q 002391 76 EQFNRVANIYFLIAALLSVTP--LSP----FSP--VSMLLPLAIVVGV---SMAKEALEDWRRFMQDKEVNA---R-KVS 140 (928)
Q Consensus 76 ~qf~~~~~~~~l~~~il~~i~--~~~----~~~--~~~~~~l~~vl~~---~~~~~~~~d~~r~k~~~~~n~---~-~~~ 140 (928)
.+|++|..+.++++++++++. +.. ..| +..+..++++++. +.+.|.+.++|..++.+.+.+ . +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 467889999999999999864 211 111 2222222222222 223333335555555444443 2 566
Q ss_pred -EEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCchhhhcc
Q 002391 141 -VHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKE 219 (928)
Q Consensus 141 -V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 219 (928)
|. |||++++|+.++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.++...
T Consensus 108 ~v~-rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~d~----------- 170 (673)
T PRK14010 108 RIK-QDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK-----GLATVDESAITGESAPVIKESGGDF----------- 170 (673)
T ss_pred EEE-eCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE-----cceEEecchhcCCCCceeccCCCcc-----------
Confidence 45 89999999999999999999999999999999999 6689999999999999999987211
Q ss_pred CcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcceeee---cCCCCCCCccHHHH
Q 002391 220 FTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEK 296 (928)
Q Consensus 220 ~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~ 296 (928)
...|+||.+.+|. +.++|+.||.+|.+.+ ..+.++.++||+|.
T Consensus 171 -------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~ 216 (673)
T PRK14010 171 -------------DNVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNEI 216 (673)
T ss_pred -------------CeeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHHH
Confidence 0248999998887 9999999999996644 45567777899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHH
Q 002391 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIE 376 (928)
Q Consensus 297 ~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~ 376 (928)
.+..+...+..+. ++++ ++.++.. .|. .....+...+.+.+.+|||+|+..++
T Consensus 217 ~l~~l~~~l~ii~--l~~~---~~~~~~~------~~~----------------~~~~~~~~~val~V~~IP~aL~~~~~ 269 (673)
T PRK14010 217 ALFTLLMTLTIIF--LVVI---LTMYPLA------KFL----------------NFNLSIAMLIALAVCLIPTTIGGLLS 269 (673)
T ss_pred HHHHHHHHHhHHH--HHHH---HHHHHHH------hhc----------------cHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 7766544333211 1111 1111000 000 01134566777777889999999999
Q ss_pred HHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEEEEcCcccCCCchHHHHHHHH
Q 002391 377 IVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAK 456 (928)
Q Consensus 377 ~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~ 456 (928)
++...++.++ +++++++|+...+|.||.+++||||||||||+|++.+..+...+ +
T Consensus 270 ~~~~~g~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~-----~---------- 324 (673)
T PRK14010 270 AIGIAGMDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK-----S---------- 324 (673)
T ss_pred HHHHHHHHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC-----C----------
Confidence 9888888888 89999999999999999999999999999999877665542110 0
Q ss_pred HhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCCCCCChHHHHHHHHHHhhccce
Q 002391 457 QMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTA 536 (928)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~ 536 (928)
....+++...++|+..
T Consensus 325 ----------------------------------------------------------------~~~~~ll~~a~~~~~~ 340 (673)
T PRK14010 325 ----------------------------------------------------------------SSFERLVKAAYESSIA 340 (673)
T ss_pred ----------------------------------------------------------------ccHHHHHHHHHHhcCC
Confidence 0112345556666532
Q ss_pred eecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEc
Q 002391 537 IPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRD 616 (928)
Q Consensus 537 ~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~ 616 (928)
+.||.+.|+++++++.|+.... .....+||++.+|+|++.+.
T Consensus 341 --------------s~~P~~~AIv~~a~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~- 382 (673)
T PRK14010 341 --------------DDTPEGRSIVKLAYKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT- 382 (673)
T ss_pred --------------CCChHHHHHHHHHHHcCCCchh-----------------------hhcceeccccccceeEEEEC-
Confidence 3599999999999987654210 01123799999999998753
Q ss_pred CCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHH
Q 002391 617 EDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATL 696 (928)
Q Consensus 617 ~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l 696 (928)
++ .+.|||++.++++|...+...+..+.+..++++++|+|+++++
T Consensus 383 --g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~------------------------------- 427 (673)
T PRK14010 383 --TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVL------------------------------- 427 (673)
T ss_pred --CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEE-------------------------------
Confidence 33 4569999999999986544444556777788999999999877
Q ss_pred HHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHH
Q 002391 697 EHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVG 776 (928)
Q Consensus 697 ~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~ 776 (928)
.|++++|+++++|++|++++++|++||++||+++|+|||++.||.+||+++|+..
T Consensus 428 --------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~----------------- 482 (673)
T PRK14010 428 --------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR----------------- 482 (673)
T ss_pred --------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-----------------
Confidence 3678999999999999999999999999999999999999999999999999931
Q ss_pred HHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHH
Q 002391 777 KAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLV 856 (928)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l 856 (928)
+++|++|+||.++|+.+
T Consensus 483 ---------------------------------------------------------------v~A~~~PedK~~iV~~l 499 (673)
T PRK14010 483 ---------------------------------------------------------------FVAECKPEDKINVIREE 499 (673)
T ss_pred ---------------------------------------------------------------EEcCCCHHHHHHHHHHH
Confidence 88999999999999999
Q ss_pred hhcCCCEEEEEcCCcccHHHHHhCCccEEec-CCchhHHHHhCceeccccc----ccccccchhhHHH-HhHHhh
Q 002391 857 KEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQIVLSGHDMRKCIQ----VFAFDIADCSLKI-AKFATF 925 (928)
Q Consensus 857 ~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~-g~e~~~a~~aaD~v~~~~~----~~~~~~~~~~~~~-i~~~~~ 925 (928)
|+ .|+.|+|+|||.||+|+|++|||||||+ |++. |+++||+++..++ +.++++||++..+ -||.+|
T Consensus 500 Q~-~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f 571 (673)
T PRK14010 500 QA-KGHIVAMTGDGTNDAPALAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTF 571 (673)
T ss_pred Hh-CCCEEEEECCChhhHHHHHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhe
Confidence 98 7999999999999999999999999995 4444 9999999987555 4489999995544 445544
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-74 Score=644.40 Aligned_cols=668 Identities=21% Similarity=0.235 Sum_probs=510.5
Q ss_pred cCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhccc--C--CC-----CCCcchhhhHHHHHHHHHHH
Q 002391 49 KRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--L--SP-----FSPVSMLLPLAIVVGVSMAK 119 (928)
Q Consensus 49 ~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~--~--~~-----~~~~~~~~~l~~vl~~~~~~ 119 (928)
+++.+-|+|..+.+|.++=+ ..|..|+...+.+.+++.++++++. + +. ..-....+.|+.+++++.+-
T Consensus 66 ~~L~rdG~NaL~Ppk~t~~w---ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~ 142 (1019)
T KOG0203|consen 66 EKLARDGPNALTPPKTTPEW---IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLF 142 (1019)
T ss_pred hhhccCCCCCCCCCCCChHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecC
Confidence 45778999999999988743 5688899999999999999999864 1 11 11222334455566666666
Q ss_pred HHHHHHHHhhh---hhhhccceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCC
Q 002391 120 EALEDWRRFMQ---DKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGE 196 (928)
Q Consensus 120 ~~~~d~~r~k~---~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGE 196 (928)
..+++.+..+- .+.+-...++|+ |+|....+..++|+|||+|.++-|+++|||++++++.+ |+||+|+||||
T Consensus 143 ~~~qe~ks~~im~sF~~l~P~~~~Vi-Rdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTGe 217 (1019)
T KOG0203|consen 143 SYYQEAKSSKIMDSFKNLVPQQALVI-RDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTGE 217 (1019)
T ss_pred CCccchhhHHHHHHHhccchhhheee-ecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEeccccccc
Confidence 66666554443 334445889999 89999999999999999999999999999999999886 99999999999
Q ss_pred CcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecC
Q 002391 197 TNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGH 276 (928)
Q Consensus 197 s~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~ 276 (928)
|.|..+.+.-...... ......|.+|.+++|. ++|+|++||.
T Consensus 218 sEP~~~~~~~t~~~~~-----------------Et~Ni~f~st~~veG~---------------------~~givi~tGd 259 (1019)
T KOG0203|consen 218 SEPQTRSPEFTHENPL-----------------ETRNIAFFSTNCVEGT---------------------GRGIVIATGD 259 (1019)
T ss_pred cCCccCCccccccCch-----------------hheeeeeeeeEEecce---------------------EEEEEEecCC
Confidence 9999987743221100 0112348888888888 9999999999
Q ss_pred cceeeecCC---CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHH
Q 002391 277 DSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGL 353 (928)
Q Consensus 277 ~Tki~~~~~---~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (928)
+|.+++.+. .....++++++.+++++.++..+.+++.+..+++..+..+ .| +
T Consensus 260 ~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy-----~~--------------------l 314 (1019)
T KOG0203|consen 260 RTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY-----EW--------------------L 314 (1019)
T ss_pred ceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc-----hh--------------------H
Confidence 999887665 4467789999999999999998888888877766554422 23 3
Q ss_pred HHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEE
Q 002391 354 AHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDF 433 (928)
Q Consensus 354 ~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v 433 (928)
..+.+.+.+++..+|.+|+.+++.....-+.+| .++++++|++.+.|.||...+||+|||||||+|.|+|
T Consensus 315 ~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtV 384 (1019)
T KOG0203|consen 315 RAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTV 384 (1019)
T ss_pred HHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEecceEE
Confidence 455568889999999999999999999989988 8999999999999999999999999999999999999
Q ss_pred EEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccC
Q 002391 434 LKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGN 513 (928)
Q Consensus 434 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (928)
.++|.++.....+.++.. ++..|
T Consensus 385 ahlw~d~~i~~~d~~~~~------------------------------------------------~~~~~--------- 407 (1019)
T KOG0203|consen 385 AHLWFDNQIHEADTTEDQ------------------------------------------------SGQSF--------- 407 (1019)
T ss_pred EeeccCCceeeeechhhh------------------------------------------------hcccc---------
Confidence 999988764322211100 00000
Q ss_pred CCCCCChHHHHHHHHHHhhccceeecccCCCC--ceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCc
Q 002391 514 WLKEPNVDTLLLFFRILAICHTAIPELNEETG--NLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPV 591 (928)
Q Consensus 514 ~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~--~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~ 591 (928)
...+.....+.++..+||.+.....+.+- .-.-..+++.|.||++++.-.-... ...
T Consensus 408 ---~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~------------------~~~ 466 (1019)
T KOG0203|consen 408 ---DKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV------------------MEL 466 (1019)
T ss_pred ---cccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH------------------HHH
Confidence 01134567889999999999876433211 1122359999999999988532221 113
Q ss_pred eeEEEEEEeecCCCCCceeEEEEEcCC---CcEEEEEccchhhhHHhhcc---------cccccHHHHHHHHHHHHhcCC
Q 002391 592 EREFKILNLLDFTSKRKRMSVIVRDED---GQILLLCKGADSIIFDRLSK---------NGRMYEEATTKLLNEYGEAGL 659 (928)
Q Consensus 592 ~~~~~il~~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~Gl 659 (928)
++.++.+..+||+|.+|..-.+.+..+ .+..+.+|||||.++++|+. .++...+.+.....++...|-
T Consensus 467 R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~Ge 546 (1019)
T KOG0203|consen 467 RERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGE 546 (1019)
T ss_pred HHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcch
Confidence 677888999999999999999998754 67899999999999999985 123456778888899999999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEE
Q 002391 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (928)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~m 739 (928)
||+.+|++.+++++|.+.-.-. ...+ +.--.++.|+|++++-||+|..+|+++.+++.|||||+|
T Consensus 547 rVlgF~~~~l~~~~~p~~~~f~---~d~~------------n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvim 611 (1019)
T KOG0203|consen 547 RVLGFCDLELPDEKFPRGFQFD---TDDV------------NFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIM 611 (1019)
T ss_pred HHHHHHHHhcchhcCCCceEee---cCCC------------CCcchhccccchhhccCCCcccCchhhhhhhhhCceEEE
Confidence 9999999999987665321100 0000 112258999999999999999999999999999999999
Q ss_pred EcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhH
Q 002391 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (928)
Q Consensus 740 lTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (928)
+|||++.||.+||++.||+....+.... +..+. .............+.|+.|.+|..
T Consensus 612 VTgdhpiTAkAiA~~vgIi~~~~et~e~-------------------~a~r~----~~~v~~vn~~~a~a~VihG~eL~~ 668 (1019)
T KOG0203|consen 612 VTGDHPITAKAIAKSVGIISEGSETVED-------------------IAKRL----NIPVEQVNSRDAKAAVIHGSELPD 668 (1019)
T ss_pred EecCccchhhhhhhheeeecCCchhhhh-------------------hHHhc----CCcccccCccccceEEEecccccc
Confidence 9999999999999999998765432210 00000 000001112235789999999987
Q ss_pred hhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEe--cCCchhHHHHh
Q 002391 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI--SGVEGMQIVLS 897 (928)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~--~g~e~~~a~~a 897 (928)
+.++++. ++.......||||.||+||..||+..|+ .|.+|+.+|||.||.|||+.||||||| +|++. +|.|
T Consensus 669 ~~~~qld----~il~nh~eIVFARTSPqQKLiIVe~cQr-~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKqA 741 (1019)
T KOG0203|consen 669 MSSEQLD----ELLQNHQEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQA 741 (1019)
T ss_pred cCHHHHH----HHHHhCCceEEEecCccceEEeEhhhhh-cCcEEEEeCCCcCCChhhcccccceeeccccchH--HHhh
Confidence 7655443 3444556789999999999999999998 899999999999999999999999988 56777 8999
Q ss_pred Cceeccccc----ccccccchhhHHHH
Q 002391 898 GHDMRKCIQ----VFAFDIADCSLKIA 920 (928)
Q Consensus 898 aD~v~~~~~----~~~~~~~~~~~~~i 920 (928)
||+++..++ +..++.+|-..-+.
T Consensus 742 ADmILLDDNFASIVtGVEEGRLiFDNL 768 (1019)
T KOG0203|consen 742 ADMILLDDNFASIVTGVEEGRLIFDNL 768 (1019)
T ss_pred cceEEecCcchhheeecccceehhhhH
Confidence 999998777 55677787644443
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-69 Score=629.33 Aligned_cols=518 Identities=18% Similarity=0.226 Sum_probs=404.0
Q ss_pred HHHHhhHHHHHHHHHHHHhccc-CCC---------CCCcchh--hhHHHHHHHHHHHHHHHHHHHhhhhhhhcc---c-e
Q 002391 75 FEQFNRVANIYFLIAALLSVTP-LSP---------FSPVSML--LPLAIVVGVSMAKEALEDWRRFMQDKEVNA---R-K 138 (928)
Q Consensus 75 ~~qf~~~~~~~~l~~~il~~i~-~~~---------~~~~~~~--~~l~~vl~~~~~~~~~~d~~r~k~~~~~n~---~-~ 138 (928)
..||++|..+.++++++++++. +.+ ..|+... +.+++.+++..+.|.+.+++..++.+.+++ . .
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 3578999999999999998864 211 1244322 223344556666677888877777766654 2 4
Q ss_pred EEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCchhhhc
Q 002391 139 VSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFK 218 (928)
Q Consensus 139 ~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~ 218 (928)
++|+++||++++|+.++|+|||+|.|++||.|||||++++ |.+.||||.|||||.|+.|.+++...
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~~~~--------- 172 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE-----GVASVDESAITGESAPVIKESGGDFA--------- 172 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ccEEEEcccccCCCCceeecCCCCcc---------
Confidence 7787458999999999999999999999999999999999 77999999999999999999875320
Q ss_pred cCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcceee---ecCCCCCCCccHHH
Q 002391 219 EFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM---QNATTSPSKRSGIE 295 (928)
Q Consensus 219 ~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~ 295 (928)
..|+||.+.+|. +.+.|+.+|.+|.+. ...+.++.+++|+|
T Consensus 173 ---------------~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq 216 (675)
T TIGR01497 173 ---------------SVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTPNE 216 (675)
T ss_pred ---------------eeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCChHH
Confidence 148888888777 999999999999654 44456777789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccchhhHHH
Q 002391 296 KKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSI 375 (928)
Q Consensus 296 ~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l 375 (928)
..++.+..++.++.+++++ .++.+.. |- . ....+...+++++++|||+|....
T Consensus 217 ~~l~~l~~~l~~v~li~~~---~~~~~~~-------~~-----------~------~~~~~~~lvallV~aiP~aLg~l~ 269 (675)
T TIGR01497 217 IALTILLIALTLVFLLVTA---TLWPFAA-------YG-----------G------NAISVTVLVALLVCLIPTTIGGLL 269 (675)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHH-------hc-----------C------hhHHHHHHHHHHHHhCchhhhhHH
Confidence 8888776655433332221 1221100 00 0 012455668889999999887766
Q ss_pred HHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEEEEcCcccCCCchHHHHHHH
Q 002391 376 EIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAA 455 (928)
Q Consensus 376 ~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~ 455 (928)
+.+...++.++ .+.++++|+...+|.||++++||||||||||+|+|++.+++..+..
T Consensus 270 ~av~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~------------- 326 (675)
T TIGR01497 270 SAIGIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV------------- 326 (675)
T ss_pred HHHHHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC-------------
Confidence 66666777777 7899999999999999999999999999999999999987532100
Q ss_pred HHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCCCCCChHHHHHHHHHHhhccc
Q 002391 456 KQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535 (928)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~ 535 (928)
...+++...++|+.
T Consensus 327 ------------------------------------------------------------------~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 327 ------------------------------------------------------------------DEKTLADAAQLASL 340 (675)
T ss_pred ------------------------------------------------------------------cHHHHHHHHHHhcC
Confidence 01134556666643
Q ss_pred eeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEE
Q 002391 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVR 615 (928)
Q Consensus 536 ~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~ 615 (928)
. +.||.+.|++++|++.|..... ..++..+..||++.+++|++.+.
T Consensus 341 ~--------------s~hP~a~Aiv~~a~~~~~~~~~--------------------~~~~~~~~~pf~~~~~~sg~~~~ 386 (675)
T TIGR01497 341 A--------------DDTPEGKSIVILAKQLGIREDD--------------------VQSLHATFVEFTAQTRMSGINLD 386 (675)
T ss_pred C--------------CCCcHHHHHHHHHHHcCCCccc--------------------cccccceEEEEcCCCcEEEEEEe
Confidence 2 3689999999999987754211 12334567899999877776553
Q ss_pred cCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHH
Q 002391 616 DEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREAT 695 (928)
Q Consensus 616 ~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~ 695 (928)
+| ..++||+++.+.+.|...+...+..+.+.+++++++|+|++++|+
T Consensus 387 --~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~----------------------------- 433 (675)
T TIGR01497 387 --NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE----------------------------- 433 (675)
T ss_pred --CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEE-----------------------------
Confidence 34 578999999999988765545566778888999999999999994
Q ss_pred HHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchH
Q 002391 696 LEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV 775 (928)
Q Consensus 696 l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~ 775 (928)
+.+++|+++++|++|++++++|++|+++||+++|+|||+..+|.++|+++|+..
T Consensus 434 ----------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------- 487 (675)
T TIGR01497 434 ----------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------------- 487 (675)
T ss_pred ----------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------
Confidence 457999999999999999999999999999999999999999999999999831
Q ss_pred HHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHH
Q 002391 776 GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRL 855 (928)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~ 855 (928)
+++|++|++|..+|+.
T Consensus 488 ----------------------------------------------------------------v~a~~~PedK~~~v~~ 503 (675)
T TIGR01497 488 ----------------------------------------------------------------FIAEATPEDKIALIRQ 503 (675)
T ss_pred ----------------------------------------------------------------EEcCCCHHHHHHHHHH
Confidence 7889999999999999
Q ss_pred HhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc----ccccccchhhH
Q 002391 856 VKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ----VFAFDIADCSL 917 (928)
Q Consensus 856 l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~----~~~~~~~~~~~ 917 (928)
+++ .|+.|+|+|||.||+|||++|||||+|++... -|+++||+++...+ +.++++||++.
T Consensus 504 lq~-~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~-~akeaadivLldd~~s~Iv~av~~GR~~~ 567 (675)
T TIGR01497 504 EQA-EGKLVAMTGDGTNDAPALAQADVGVAMNSGTQ-AAKEAANMVDLDSDPTKLIEVVHIGKQLL 567 (675)
T ss_pred HHH-cCCeEEEECCCcchHHHHHhCCEeEEeCCCCH-HHHHhCCEEECCCCHHHHHHHHHHHHHHH
Confidence 998 78999999999999999999999999964322 29999999987555 44888998854
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-69 Score=599.14 Aligned_cols=636 Identities=21% Similarity=0.274 Sum_probs=450.4
Q ss_pred CCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 002391 52 LKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQD 131 (928)
Q Consensus 52 ~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~~~~~~~~~~~~~l~~vl~~~~~~~~~~d~~r~k~~ 131 (928)
++||.|......+++- ..|.|.-..|+.+|..+...||+.- ..||.+++.|++++.+ |+---++|.+..
T Consensus 174 ~~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD---eyWYySlFtLfMli~f----E~tlV~Qrm~~l 242 (1160)
T KOG0209|consen 174 HKYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLIAF----EATLVKQRMRTL 242 (1160)
T ss_pred HHhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH---HHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 4599999999999875 6677888889999999999999874 5677777777665543 444445555554
Q ss_pred hhhc---c--ceEEEEeCCceEEEeecccCCcCcEEEecc---CCcCCceEEEEeecCCCceEEEEeecCCCCCcceeee
Q 002391 132 KEVN---A--RKVSVHVGNGVFSYKPWEKIQVGDIVKVEK---DQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (928)
Q Consensus 132 ~~~n---~--~~~~V~~r~g~~~~i~~~~L~vGDII~l~~---ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~ 203 (928)
.+.. + ..+.|+ |+++|+.+..++|.|||+|.|.. ...+|||++||. |.|.|||++|||||.|..|.
T Consensus 243 se~R~Mg~kpy~I~v~-R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~-----GsciVnEaMLtGESvPl~KE 316 (1160)
T KOG0209|consen 243 SEFRTMGNKPYTINVY-RNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLR-----GSCIVNEAMLTGESVPLMKE 316 (1160)
T ss_pred HHHHhcCCCceEEEEE-ecCcceeccccccCCCceEEeccCcccCcCCceEEEEe-----cceeechhhhcCCCcccccc
Confidence 4433 2 568899 89999999999999999999987 778999999999 88999999999999999999
Q ss_pred cccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEe-cCCeEEEEEEEecCcceeee
Q 002391 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR-NTAHVYGSVIFTGHDSKVMQ 282 (928)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~-nt~~~~gvVv~tG~~Tki~~ 282 (928)
+++... .++ .+..+..+.....|.||.++.-.. ..-+.++ -.+-+++.|++||.+|..+.
T Consensus 317 ~Ie~~~----~d~------~ld~~~d~k~hVlfGGTkivQht~---------p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 317 SIELRD----SDD------ILDIDRDDKLHVLFGGTKIVQHTP---------PKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred ccccCC----hhh------hcccccccceEEEEcCceEEEecC---------CccccccCCCCCeEEEEEeccccccCCc
Confidence 987652 111 222333344556688887763210 0001111 13458999999999995444
Q ss_pred cCC---CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC--CccccCCCCCccccCCCCCchhHHHHHH
Q 002391 283 NAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTP--QWWYLKPKETDVYFNPGKPLVPGLAHLV 357 (928)
Q Consensus 283 ~~~---~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (928)
..+ ....+-|.- |+-..+++.+++++|++.+ +++|...... ..-| .-|+
T Consensus 378 LvRtilf~aervTaN----n~Etf~FILFLlVFAiaAa--~Yvwv~Gskd~~RsrY--------------------KL~L 431 (1160)
T KOG0209|consen 378 LVRTILFSAERVTAN----NRETFIFILFLLVFAIAAA--GYVWVEGSKDPTRSRY--------------------KLFL 431 (1160)
T ss_pred eeeeEEecceeeeec----cHHHHHHHHHHHHHHHHhh--heEEEecccCcchhhh--------------------heee
Confidence 333 112222221 3334445555555665543 3333322110 1111 2455
Q ss_pred HHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEEE
Q 002391 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCS 437 (928)
Q Consensus 358 ~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~ 437 (928)
-+..++...+|.-||+-++++--.+...+ ++.++.|..+-.+.-.|+||..|||||||||+..|.|.++.
T Consensus 432 eC~LIlTSVvPpELPmELSmAVNsSL~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gva 501 (1160)
T KOG0209|consen 432 ECTLILTSVVPPELPMELSMAVNSSLIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVA 501 (1160)
T ss_pred eeeEEEeccCCCCCchhhhHHHHHHHHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEEecc
Confidence 67788899999999998877655544445 78899999999999999999999999999999999999763
Q ss_pred EcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCCCC
Q 002391 438 VAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKE 517 (928)
Q Consensus 438 i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (928)
|..-... ...
T Consensus 502 --g~~~~~~--------------------------------------------------------------------~~~ 511 (1160)
T KOG0209|consen 502 --GLSADEG--------------------------------------------------------------------ALT 511 (1160)
T ss_pred --cccCCcc--------------------------------------------------------------------ccc
Confidence 2110000 000
Q ss_pred CChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEE
Q 002391 518 PNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597 (928)
Q Consensus 518 ~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 597 (928)
+-++.-.+-...+|.||+...-.++ ..|+|.|.|.+++ .||.+...+.. ....|+ ....+|
T Consensus 512 ~~s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~~v-------~p~~~~--~~~lkI 572 (1160)
T KOG0209|consen 512 PASKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKNSV-------CPREGN--GKKLKI 572 (1160)
T ss_pred chhhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCccc-------CCCcCC--Ccccch
Confidence 0011112456799999998765433 3589999999975 67766543210 111111 235788
Q ss_pred EEeecCCCCCceeEEEEEcCC----CcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHH
Q 002391 598 LNLLDFTSKRKRMSVIVRDED----GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESE 673 (928)
Q Consensus 598 l~~~~F~s~rkrmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e 673 (928)
.+.+.|+|..|||||++.... -++++.+|||||+|.+++.. .+..+.+...+|+++|.|||+++||.+.+--
T Consensus 573 ~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~ 648 (1160)
T KOG0209|consen 573 IQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEIYKRYTRQGSRVLALGYKPLGDMM 648 (1160)
T ss_pred hhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----CchhHHHHHHHHhhccceEEEEecccccccc
Confidence 999999999999999998632 36899999999999999874 5677888899999999999999999987321
Q ss_pred HHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHH
Q 002391 674 YSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF 753 (928)
Q Consensus 674 ~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~ 753 (928)
-++-.+ .+| +.+|.||+|.|++.|.-|||++++++|+.|++++++++|+|||++.||..+|+
T Consensus 649 ~~q~rd----------~~R--------e~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak 710 (1160)
T KOG0209|consen 649 VSQVRD----------LKR--------EDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAK 710 (1160)
T ss_pred hhhhhh----------hhh--------hhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehh
Confidence 111000 233 78899999999999999999999999999999999999999999999999999
Q ss_pred HccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhh----hccC---CCcCcEEEEEcCchhhHhhhHHHH
Q 002391 754 ACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMI----KLER---DPHAAYALIIEGKTLAYALEDDMK 826 (928)
Q Consensus 754 ~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~lvi~G~~l~~~~~~~~~ 826 (928)
++|+......++...+...+.. . ...+.+..+ +... .....+.+.++|..++++...+.
T Consensus 711 ~v~iv~k~~~vl~~~~~~~~~~---~----------~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~- 776 (1160)
T KOG0209|consen 711 EVGIVEKPTLVLDLPEEGDGNQ---L----------EWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQ- 776 (1160)
T ss_pred eeeeeccCceeeccCccCCCce---e----------eEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHH-
Confidence 9999876544444333321100 0 000000000 0000 02234568999999998876652
Q ss_pred HHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCC
Q 002391 827 HHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGV 889 (928)
Q Consensus 827 ~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~ 889 (928)
+.++.. .+.||||+.|+||..++..+++ .|+.|+|||||.||+++|++||||||+-++
T Consensus 777 --l~~l~~--hv~VfARvaP~QKE~ii~tlK~-~Gy~TLMCGDGTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 777 --LRRLIP--HVWVFARVAPKQKEFIITTLKK-LGYVTLMCGDGTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred --HHHhhh--heeEEEeeChhhHHHHHHHHHh-cCeEEEEecCCCcchhhhhhcccceehhcC
Confidence 222222 2459999999999999999998 899999999999999999999999998543
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-65 Score=598.15 Aligned_cols=477 Identities=23% Similarity=0.284 Sum_probs=387.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhc------cceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCC
Q 002391 109 LAIVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (928)
Q Consensus 109 l~~vl~~~~~~~~~~d~~r~k~~~~~n------~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~ 182 (928)
-.+++++..+.+++|++.+.++.+.+. .++++++++||++++|+.++|+|||+|.|++||+||+||+|++
T Consensus 177 aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~---- 252 (713)
T COG2217 177 AAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS---- 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe----
Confidence 345566667788999998888755443 4788787566779999999999999999999999999999999
Q ss_pred CceEEEEeecCCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEe
Q 002391 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (928)
Q Consensus 183 ~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~ 262 (928)
|...||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 253 -G~s~vDeS~iTGEs~PV~k~~Gd~V---------------------------~aGtiN~~G~----------------- 287 (713)
T COG2217 253 -GSSSVDESMLTGESLPVEKKPGDEV---------------------------FAGTVNLDGS----------------- 287 (713)
T ss_pred -CcEEeecchhhCCCCCEecCCCCEE---------------------------eeeEEECCcc-----------------
Confidence 8899999999999999999999887 9999999998
Q ss_pred cCCeEEEEEEEecCccee---eecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCC
Q 002391 263 NTAHVYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (928)
Q Consensus 263 nt~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 339 (928)
+...|+.+|.||.+ .+..+.++..|+++|+..|++..++.+..++++++++++|.++... .|
T Consensus 288 ----l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~----~~------- 352 (713)
T COG2217 288 ----LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG----DW------- 352 (713)
T ss_pred ----EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC----cH-------
Confidence 99999999999965 4555688899999999999999999999999999998876554321 12
Q ss_pred ccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEE
Q 002391 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (928)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~ 419 (928)
...|..++.+++.+|||+|.++.|++.+.+.... .+.|+++|+.+.+|.|+++|+|+
T Consensus 353 -------------~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l~~v~tvv 409 (713)
T COG2217 353 -------------ETALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERLAKVDTVV 409 (713)
T ss_pred -------------HHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhhccCCEEE
Confidence 2478899999999999999999999999999888 89999999999999999999999
Q ss_pred ecCCCceeeceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCcccccc
Q 002391 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (928)
Q Consensus 420 ~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (928)
||||||||+|+|++..+...+. ++
T Consensus 410 FDKTGTLT~G~p~v~~v~~~~~------~e-------------------------------------------------- 433 (713)
T COG2217 410 FDKTGTLTEGKPEVTDVVALDG------DE-------------------------------------------------- 433 (713)
T ss_pred EeCCCCCcCCceEEEEEecCCC------CH--------------------------------------------------
Confidence 9999999999999998864321 00
Q ss_pred CCCcccchhhcccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEE
Q 002391 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (928)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~ 579 (928)
.+++...+. ++..+.||...|++++|+..|..-...
T Consensus 434 ------------------------~~~L~laAa--------------lE~~S~HPiA~AIv~~a~~~~~~~~~~------ 469 (713)
T COG2217 434 ------------------------DELLALAAA--------------LEQHSEHPLAKAIVKAAAERGLPDVED------ 469 (713)
T ss_pred ------------------------HHHHHHHHH--------------HHhcCCChHHHHHHHHHHhcCCCCccc------
Confidence 022222221 123368999999999999876211110
Q ss_pred EEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCC
Q 002391 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (928)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Gl 659 (928)
+++ ..|++..- + -+| ..+.-|++..+.+. +..... .....+.+..+|.
T Consensus 470 ~~~---i~G~Gv~~---------------------~-v~g--~~v~vG~~~~~~~~----~~~~~~-~~~~~~~~~~~G~ 517 (713)
T COG2217 470 FEE---IPGRGVEA---------------------E-VDG--ERVLVGNARLLGEE----GIDLPL-LSERIEALESEGK 517 (713)
T ss_pred eee---eccCcEEE---------------------E-ECC--EEEEEcCHHHHhhc----CCCccc-hhhhHHHHHhcCC
Confidence 110 01111111 1 123 23344887655332 111111 4566778888999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEE
Q 002391 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (928)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~m 739 (928)
.++.++ .|.+++|+++++|++|++++++|++|++.|+++.|
T Consensus 518 t~v~va---------------------------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~m 558 (713)
T COG2217 518 TVVFVA---------------------------------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVM 558 (713)
T ss_pred eEEEEE---------------------------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEE
Confidence 888888 36689999999999999999999999999999999
Q ss_pred EcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhH
Q 002391 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (928)
Q Consensus 740 lTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (928)
+|||+..+|..||+++||..
T Consensus 559 LTGDn~~~A~~iA~~lGId~------------------------------------------------------------ 578 (713)
T COG2217 559 LTGDNRRTAEAIAKELGIDE------------------------------------------------------------ 578 (713)
T ss_pred EcCCCHHHHHHHHHHcChHh------------------------------------------------------------
Confidence 99999999999999999921
Q ss_pred hhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecC-CchhHHHHhC
Q 002391 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG-VEGMQIVLSG 898 (928)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g-~e~~~a~~aa 898 (928)
+++.+.|++|+++|+.+++ .|+.|+|+|||.||+|+|.+|||||||+. ++. |+++|
T Consensus 579 --------------------v~AellPedK~~~V~~l~~-~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~eaA 635 (713)
T COG2217 579 --------------------VRAELLPEDKAEIVRELQA-EGRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEAA 635 (713)
T ss_pred --------------------heccCCcHHHHHHHHHHHh-cCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHhC
Confidence 7888999999999999997 79999999999999999999999999964 666 99999
Q ss_pred ceeccccc----ccccccchhhHHHHhHHhhh
Q 002391 899 HDMRKCIQ----VFAFDIADCSLKIAKFATFC 926 (928)
Q Consensus 899 D~v~~~~~----~~~~~~~~~~~~~i~~~~~~ 926 (928)
|+++.-.+ +.+|++||+|+++||.+.|.
T Consensus 636 DvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~ 667 (713)
T COG2217 636 DVVLMRDDLSAVPEAIDLSRATRRIIKQNLFW 667 (713)
T ss_pred CEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987544 44999999999999998764
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-64 Score=591.20 Aligned_cols=458 Identities=33% Similarity=0.444 Sum_probs=383.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhhhccceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCc
Q 002391 105 MLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (928)
Q Consensus 105 ~~~~l~~vl~~~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G 184 (928)
.++++++.++....+...++..+...+..+++++++|+ |+| ++.|++++|+|||+|.|++||.|||||+|++ |
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~-r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~-----g 75 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVL-RNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS-----G 75 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEE-ECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE-----c
Confidence 34556666666666666777777766666888999999 788 9999999999999999999999999999999 6
Q ss_pred eEEEEeecCCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecC
Q 002391 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (928)
Q Consensus 185 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt 264 (928)
.|.||||+|||||.|+.|.+++.. |+|+.+.+|.
T Consensus 76 ~~~vdes~LTGEs~pv~k~~g~~v---------------------------~~gs~~~~G~------------------- 109 (499)
T TIGR01494 76 SCFVDESNLTGESVPVLKTAGDAV---------------------------FAGTYVFNGT------------------- 109 (499)
T ss_pred cEEEEcccccCCCCCeeeccCCcc---------------------------ccCcEEeccE-------------------
Confidence 799999999999999999997655 8899998888
Q ss_pred CeEEEEEEEecCcceee---ecCCCCCCCccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCc
Q 002391 265 AHVYGSVIFTGHDSKVM---QNATTSPSKRSGIEKKMDKII-FILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (928)
Q Consensus 265 ~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~n~~~-~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 340 (928)
+...|..+|.+|... .........++++++..+++. .++++++++++++.+++|..+.... .
T Consensus 110 --~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~--~---------- 175 (499)
T TIGR01494 110 --LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP--N---------- 175 (499)
T ss_pred --EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc--c----------
Confidence 888999999998543 333344555789999999998 7787778777777776654321100 0
Q ss_pred cccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEe
Q 002391 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (928)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~ 420 (928)
.....|.+++++++.+|||+|+++++++...+...+ .++++++|+++.+|+||+++++||
T Consensus 176 ----------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v~~i~f 235 (499)
T TIGR01494 176 ----------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKVDYICS 235 (499)
T ss_pred ----------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCCcEEEe
Confidence 113588999999999999999999999999998877 788999999999999999999999
Q ss_pred cCCCceeeceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccC
Q 002391 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (928)
Q Consensus 421 DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (928)
|||||||+|+|+|.++++.+.
T Consensus 236 DKTGTLT~~~~~v~~~~~~~~----------------------------------------------------------- 256 (499)
T TIGR01494 236 DKTGTLTKNEMSFKKVSVLGG----------------------------------------------------------- 256 (499)
T ss_pred eCCCccccCceEEEEEEecCC-----------------------------------------------------------
Confidence 999999999999998865321
Q ss_pred CCcccchhhcccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEE
Q 002391 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580 (928)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i 580 (928)
++.++||+|.|++++++..+
T Consensus 257 -----------------------------------------------~~~s~hp~~~ai~~~~~~~~------------- 276 (499)
T TIGR01494 257 -----------------------------------------------EYLSGHPDERALVKSAKWKI------------- 276 (499)
T ss_pred -----------------------------------------------CcCCCChHHHHHHHHhhhcC-------------
Confidence 01247999999999987411
Q ss_pred EecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCe
Q 002391 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLR 660 (928)
Q Consensus 581 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr 660 (928)
+...||++.+++|+++++.+++ .|+||+++.+.+.|.. +.+.++.++.+|+|
T Consensus 277 -----------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g~~ 328 (499)
T TIGR01494 277 -----------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSGLR 328 (499)
T ss_pred -----------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCCCE
Confidence 2357999999999999986433 4789999999988742 23445678899999
Q ss_pred EEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEE
Q 002391 661 TLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740 (928)
Q Consensus 661 ~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~ml 740 (928)
++++|++ -+++|+++++|++|++++++|+.|+++|+++||+
T Consensus 329 ~~~~a~~---------------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~l 369 (499)
T TIGR01494 329 VLAVASK---------------------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIML 369 (499)
T ss_pred EEEEEEC---------------------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEE
Confidence 9999963 2589999999999999999999999999999999
Q ss_pred cCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHh
Q 002391 741 TGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYA 820 (928)
Q Consensus 741 TGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~ 820 (928)
|||+..+|..+|+++|+
T Consensus 370 tGD~~~~a~~ia~~lgi--------------------------------------------------------------- 386 (499)
T TIGR01494 370 TGDNVLTAKAIAKELGI--------------------------------------------------------------- 386 (499)
T ss_pred cCCCHHHHHHHHHHcCc---------------------------------------------------------------
Confidence 99999999999999875
Q ss_pred hhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCce
Q 002391 821 LEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHD 900 (928)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~ 900 (928)
+++++|++|+++|+.+++ .|+.|+|+|||.||++||++|||||+|+ |+.+||+
T Consensus 387 --------------------~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adi 439 (499)
T TIGR01494 387 --------------------FARVTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADI 439 (499)
T ss_pred --------------------eeccCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCe
Confidence 357899999999999997 7899999999999999999999999995 6888999
Q ss_pred eccccc----ccccccchhhHHHHhHHhh
Q 002391 901 MRKCIQ----VFAFDIADCSLKIAKFATF 925 (928)
Q Consensus 901 v~~~~~----~~~~~~~~~~~~~i~~~~~ 925 (928)
++.-.+ ..++++||++.++++.+.+
T Consensus 440 vl~~~~l~~i~~~~~~~r~~~~~i~~~~~ 468 (499)
T TIGR01494 440 VLLDDNLSTIVDALKEGRKTFSTIKSNIF 468 (499)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 987543 3488999999999987654
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-64 Score=542.78 Aligned_cols=584 Identities=20% Similarity=0.217 Sum_probs=447.1
Q ss_pred ccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhccc----CCCCCCcchhhhHHHHHHHHHHHHHHH
Q 002391 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP----LSPFSPVSMLLPLAIVVGVSMAKEALE 123 (928)
Q Consensus 48 ~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~----~~~~~~~~~~~~l~~vl~~~~~~~~~~ 123 (928)
.+|++.||.|.....|-+.+ +.|+..|..|..|..-.++++.... -.|-+|..... +..++++++...+++
T Consensus 43 ~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~g-I~~LLliNsti~Fve 117 (942)
T KOG0205|consen 43 EERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVG-ICCLLLINSTISFIE 117 (942)
T ss_pred HHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhh-hheeeeecceeeeee
Confidence 56788999999999888876 5678889999999999999988754 22345555544 335566788888889
Q ss_pred HHHHhhhhhhhcc---ceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcce
Q 002391 124 DWRRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLK 200 (928)
Q Consensus 124 d~~r~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~ 200 (928)
+++.-..-.++.. .++.|+ |||+|.+++.+.|+|||||.|+.|+.||||++||+.+ .+.||+|.|||||.|+
T Consensus 118 E~nAGn~aa~L~a~LA~KakVl-RDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD----~LkiDQSAlTGESLpv 192 (942)
T KOG0205|consen 118 ENNAGNAAAALMAGLAPKAKVL-RDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD----PLKIDQSALTGESLPV 192 (942)
T ss_pred ccccchHHHHHHhccCcccEEe-ecCeeeeeeccccccCceeeeccCCEecCccceecCC----ccccchhhhcCCcccc
Confidence 8887776555543 678999 8999999999999999999999999999999999955 3899999999999999
Q ss_pred eeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCccee
Q 002391 201 VKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKV 280 (928)
Q Consensus 201 ~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki 280 (928)
.|++++.+ |+|+.+-.|+ +.++|++||..|..
T Consensus 193 tKh~gd~v---------------------------fSgSTcKqGE---------------------~eaVViATg~~TF~ 224 (942)
T KOG0205|consen 193 TKHPGDEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTFF 224 (942)
T ss_pred ccCCCCce---------------------------ecccccccce---------------------EEEEEEEeccceee
Confidence 99999988 9999999998 99999999999987
Q ss_pred eecCC--CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHH
Q 002391 281 MQNAT--TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358 (928)
Q Consensus 281 ~~~~~--~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (928)
++-.. .+.....++++.++-+..++++.+. +.+++-+...++... .-| -...-+
T Consensus 225 GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~-~g~lie~~vmy~~q~----R~~-------------------r~~i~n 280 (942)
T KOG0205|consen 225 GKAAHLVDSTNQVGHFQKVLTGIGNFCICSIA-LGMLIEITVMYPIQH----RLY-------------------RDGIDN 280 (942)
T ss_pred hhhHHhhcCCCCcccHHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhh----hhh-------------------hhhhhh
Confidence 66443 3356678999999988776654332 333222222111110 011 012223
Q ss_pred HHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEE---
Q 002391 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLK--- 435 (928)
Q Consensus 359 ~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~--- 435 (928)
.++++..-+|++||..+++...+++-++ ++++++++...++|+|+.+|++|||||||||.|++.+.+
T Consensus 281 LlvllIGgiPiamPtVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ 350 (942)
T KOG0205|consen 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLI 350 (942)
T ss_pred eheeeecccccccceeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcc
Confidence 4455556699999988888888999988 899999999999999999999999999999999999876
Q ss_pred -EEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCC
Q 002391 436 -CSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNW 514 (928)
Q Consensus 436 -~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (928)
+++.|..
T Consensus 351 ev~v~gv~------------------------------------------------------------------------ 358 (942)
T KOG0205|consen 351 EVFVKGVD------------------------------------------------------------------------ 358 (942)
T ss_pred eeeecCCC------------------------------------------------------------------------
Confidence 2222221
Q ss_pred CCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeE
Q 002391 515 LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVERE 594 (928)
Q Consensus 515 ~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~ 594 (928)
++. ..++.|+| . .. ...+..+.|++...++- +..+..
T Consensus 359 -----~D~-~~L~A~rA--s--r~-----------en~DAID~A~v~~L~dP----------------------Keara~ 395 (942)
T KOG0205|consen 359 -----KDD-VLLTAARA--S--RK-----------ENQDAIDAAIVGMLADP----------------------KEARAG 395 (942)
T ss_pred -----hHH-HHHHHHHH--h--hh-----------cChhhHHHHHHHhhcCH----------------------HHHhhC
Confidence 001 11222222 1 11 13578899998875431 113567
Q ss_pred EEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHH
Q 002391 595 FKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEY 674 (928)
Q Consensus 595 ~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~ 674 (928)
|+.++.+||++..||....+.+++|+.+..+||||+.|++.|.... +.++...+.+++|+++|+|-|++|++..++..-
T Consensus 396 ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~-~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~ 474 (942)
T KOG0205|consen 396 IKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH-DIPERVHSIIDKFAERGLRSLAVARQEVPEKTK 474 (942)
T ss_pred ceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC-cchHHHHHHHHHHHHhcchhhhhhhhccccccc
Confidence 9999999999999999999999999999999999999999998754 478889999999999999999999988765420
Q ss_pred HHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHH
Q 002391 675 SAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (928)
Q Consensus 675 ~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 754 (928)
+.-....+|+|+.-+-||+|.++.++|......|+.|-|+|||...-+...++.
T Consensus 475 --------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrr 528 (942)
T KOG0205|consen 475 --------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR 528 (942)
T ss_pred --------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhh
Confidence 112356889999999999999999999999999999999999999999999999
Q ss_pred ccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhh
Q 002391 755 CSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAV 834 (928)
Q Consensus 755 ~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~ 834 (928)
+|+-.+-.+--..-+...+ -.+.|.+.....+
T Consensus 529 lgmgtnmypss~llG~~~~------------------------------------~~~~~~~v~elie------------ 560 (942)
T KOG0205|consen 529 LGMGTNMYPSSALLGLGKD------------------------------------GSMPGSPVDELIE------------ 560 (942)
T ss_pred hccccCcCCchhhccCCCC------------------------------------CCCCCCcHHHHhh------------
Confidence 9985432110000000000 0011111111111
Q ss_pred ccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceecccccccccccch
Q 002391 835 ECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQVFAFDIAD 914 (928)
Q Consensus 835 ~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~~~~~~~~~ 914 (928)
++.=|+.+-|+||..+|+.+|+ .++.++|.|||+||+|+|+.||+||++.+.-.+ |.-+||+|++.|.+.+|--++
T Consensus 561 --~adgfAgVfpehKy~iV~~Lq~-r~hi~gmtgdgvndapaLKkAdigiava~atda-ar~asdiVltepglSviI~av 636 (942)
T KOG0205|consen 561 --KADGFAGVFPEHKYEIVKILQE-RKHIVGMTGDGVNDAPALKKADIGIAVADATDA-ARSASDIVLTEPGLSVIISAV 636 (942)
T ss_pred --hccCccccCHHHHHHHHHHHhh-cCceecccCCCcccchhhcccccceeeccchhh-hcccccEEEcCCCchhhHHHH
Confidence 2346888999999999999998 799999999999999999999999999876665 889999999999855554444
Q ss_pred hhH
Q 002391 915 CSL 917 (928)
Q Consensus 915 ~~~ 917 (928)
.|.
T Consensus 637 ltS 639 (942)
T KOG0205|consen 637 LTS 639 (942)
T ss_pred HHH
Confidence 433
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-61 Score=577.96 Aligned_cols=472 Identities=20% Similarity=0.200 Sum_probs=378.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhc------cceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCC
Q 002391 110 AIVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYED 183 (928)
Q Consensus 110 ~~vl~~~~~~~~~~d~~r~k~~~~~n------~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~ 183 (928)
++++++..+.+++|.+.++|+.+.++ ..+++|+ |||++++|++++|+|||+|.|++||.|||||+|++
T Consensus 210 ~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vi-r~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~----- 283 (741)
T PRK11033 210 AMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRL-RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS----- 283 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-----
Confidence 34555566778888888877755443 4789999 89999999999999999999999999999999999
Q ss_pred ceEEEEeecCCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEec
Q 002391 184 GICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN 263 (928)
Q Consensus 184 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~n 263 (928)
|.+.||||.|||||.|+.|.+++.. |+|+++.+|.
T Consensus 284 g~~~vdes~lTGEs~Pv~k~~Gd~V---------------------------~aGt~~~~G~------------------ 318 (741)
T PRK11033 284 PFASFDESALTGESIPVERATGEKV---------------------------PAGATSVDRL------------------ 318 (741)
T ss_pred CcEEeecccccCCCCCEecCCCCee---------------------------ccCCEEcCce------------------
Confidence 7799999999999999999998766 8999999998
Q ss_pred CCeEEEEEEEecCcceee---ecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCc
Q 002391 264 TAHVYGSVIFTGHDSKVM---QNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (928)
Q Consensus 264 t~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 340 (928)
+.+.|+.+|.+|.+. +..+.++.+++++|+.+++++.++.+++++++++++++|.++... .|
T Consensus 319 ---~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~----~~-------- 383 (741)
T PRK11033 319 ---VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA----PW-------- 383 (741)
T ss_pred ---EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC----CH--------
Confidence 999999999999654 444577778899999999999999999999999998876433211 12
Q ss_pred cccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEe
Q 002391 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (928)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~ 420 (928)
...+.+++.+++.+|||+|.++.|++...+.... +++++++|+.+.+|.|+++++|||
T Consensus 384 ------------~~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v~~v~f 441 (741)
T PRK11033 384 ------------QEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRVTTVAF 441 (741)
T ss_pred ------------HHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCCCEEEE
Confidence 1357778999999999999999998888877766 789999999999999999999999
Q ss_pred cCCCceeeceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccC
Q 002391 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (928)
Q Consensus 421 DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (928)
|||||||+|+|+|.++...+.. ++
T Consensus 442 DKTGTLT~g~~~v~~~~~~~~~-----~~--------------------------------------------------- 465 (741)
T PRK11033 442 DKTGTLTEGKPQVTDIHPATGI-----SE--------------------------------------------------- 465 (741)
T ss_pred eCCCCCcCCceEEEEEEecCCC-----CH---------------------------------------------------
Confidence 9999999999999987542210 00
Q ss_pred CCcccchhhcccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEE
Q 002391 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580 (928)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i 580 (928)
.+++...+.. +..+.||.+.|+++++++.|..
T Consensus 466 -----------------------~~~l~~aa~~--------------e~~s~hPia~Ai~~~a~~~~~~----------- 497 (741)
T PRK11033 466 -----------------------SELLALAAAV--------------EQGSTHPLAQAIVREAQVRGLA----------- 497 (741)
T ss_pred -----------------------HHHHHHHHHH--------------hcCCCCHHHHHHHHHHHhcCCC-----------
Confidence 0222222211 1125799999999999876532
Q ss_pred EecCCCCCCCceeEEEEEEeecCCCCCceeE-EEEEc-CCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcC
Q 002391 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMS-VIVRD-EDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658 (928)
Q Consensus 581 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrms-viv~~-~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 658 (928)
+||.++++.+. .-++. -+|..+. -|+++.+.+ ..+.+...++++..+|
T Consensus 498 --------------------~~~~~~~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~--------~~~~~~~~~~~~~~~g 547 (741)
T PRK11033 498 --------------------IPEAESQRALAGSGIEGQVNGERVL--ICAPGKLPP--------LADAFAGQINELESAG 547 (741)
T ss_pred --------------------CCCCcceEEEeeEEEEEEECCEEEE--Eecchhhhh--------ccHHHHHHHHHHHhCC
Confidence 24444444442 11221 2343332 378877643 1123445567889999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEE
Q 002391 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (928)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~ 738 (928)
.|++++|+ |.+++|+++++|++|++++++|+.|++.|++++
T Consensus 548 ~~~v~va~---------------------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~ 588 (741)
T PRK11033 548 KTVVLVLR---------------------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGV 588 (741)
T ss_pred CEEEEEEE---------------------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEE
Confidence 99999994 568999999999999999999999999999999
Q ss_pred EEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhh
Q 002391 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (928)
Q Consensus 739 mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 818 (928)
|+|||+..+|..+|+++||.
T Consensus 589 llTGd~~~~a~~ia~~lgi~------------------------------------------------------------ 608 (741)
T PRK11033 589 MLTGDNPRAAAAIAGELGID------------------------------------------------------------ 608 (741)
T ss_pred EEcCCCHHHHHHHHHHcCCC------------------------------------------------------------
Confidence 99999999999999999982
Q ss_pred HhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhC
Q 002391 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSG 898 (928)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aa 898 (928)
.+++..|++|..+|+.+++ +..|+|+|||.||++||+.|||||+|++. ...++++|
T Consensus 609 ---------------------~~~~~~p~~K~~~v~~l~~--~~~v~mvGDgiNDapAl~~A~vgia~g~~-~~~a~~~a 664 (741)
T PRK11033 609 ---------------------FRAGLLPEDKVKAVTELNQ--HAPLAMVGDGINDAPAMKAASIGIAMGSG-TDVALETA 664 (741)
T ss_pred ---------------------eecCCCHHHHHHHHHHHhc--CCCEEEEECCHHhHHHHHhCCeeEEecCC-CHHHHHhC
Confidence 2345789999999999986 35899999999999999999999999643 33388999
Q ss_pred ceeccccc----ccccccchhhHHHHhHHhhh
Q 002391 899 HDMRKCIQ----VFAFDIADCSLKIAKFATFC 926 (928)
Q Consensus 899 D~v~~~~~----~~~~~~~~~~~~~i~~~~~~ 926 (928)
|+++...+ ..++++||++.++||.+.+.
T Consensus 665 divl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 665 DAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred CEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987554 34899999999999988653
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-62 Score=555.40 Aligned_cols=490 Identities=20% Similarity=0.241 Sum_probs=390.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhh------ccceEEEEeCCce-EEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCce
Q 002391 113 VGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGV-FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGI 185 (928)
Q Consensus 113 l~~~~~~~~~~d~~r~k~~~~~------n~~~~~V~~r~g~-~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~ 185 (928)
+.+..+..++|...++|+...+ .+.++.++ .+|+ +++|+.+.|++||+|+|.+|++||+||++++ |.
T Consensus 348 i~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii-~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~-----Gs 421 (951)
T KOG0207|consen 348 ITFITLGRWLESLAKGKTSEALSKLMSLAPSKATII-EDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD-----GS 421 (951)
T ss_pred HHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEe-ecCCcceEeeeeeeccCCEEEECCCCccccccEEEe-----Cc
Confidence 3345567888888888875544 35788888 6876 8999999999999999999999999999999 88
Q ss_pred EEEEeecCCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCC
Q 002391 186 CYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTA 265 (928)
Q Consensus 186 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~ 265 (928)
++||||.+|||+.|+.|++++.+ .+|+++.+|.
T Consensus 422 s~VDEs~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~-------------------- 454 (951)
T KOG0207|consen 422 SEVDESLITGESMPVPKKKGSTV---------------------------IAGSINLNGT-------------------- 454 (951)
T ss_pred eeechhhccCCceecccCCCCee---------------------------eeeeecCCce--------------------
Confidence 99999999999999999999877 7999999998
Q ss_pred eEEEEEEEecCccee---eecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccc
Q 002391 266 HVYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVY 342 (928)
Q Consensus 266 ~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 342 (928)
.+.-++.+|.||.+ .+..++++..++|+|+.+|+++.++.+++++++++++++|.+..... .||-
T Consensus 455 -l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~---~~~~-------- 522 (951)
T KOG0207|consen 455 -LLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIV---FKYP-------- 522 (951)
T ss_pred -EEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccc---ccCc--------
Confidence 99999999999965 45566888899999999999999999999999999999998876533 2321
Q ss_pred cCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecC
Q 002391 343 FNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDK 422 (928)
Q Consensus 343 ~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DK 422 (928)
..........|..++.+++.+|||+|.++.|.+.+.++..- +.+|+++|..+.+|.+.+|++|+|||
T Consensus 523 ---~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGge~LE~~hkv~tVvFDK 589 (951)
T KOG0207|consen 523 ---RSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGGEALEKAHKVKTVVFDK 589 (951)
T ss_pred ---chhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCcHHHHHHhcCCEEEEcC
Confidence 11112234588899999999999999999998888777665 88999999999999999999999999
Q ss_pred CCceeeceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCC
Q 002391 423 TGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGF 502 (928)
Q Consensus 423 TGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (928)
|||||+|++.+.++.+.+.. .
T Consensus 590 TGTLT~G~~~V~~~~~~~~~----~------------------------------------------------------- 610 (951)
T KOG0207|consen 590 TGTLTEGKPTVVDFKSLSNP----I------------------------------------------------------- 610 (951)
T ss_pred CCceecceEEEEEEEecCCc----c-------------------------------------------------------
Confidence 99999999999988654321 0
Q ss_pred cccchhhcccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEe
Q 002391 503 NFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRE 582 (928)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~ 582 (928)
..++++...+.- +..++||...|++++|+..+-. ++..
T Consensus 611 -------------------~~~e~l~~v~a~--------------Es~SeHPig~AIv~yak~~~~~-----~~~~---- 648 (951)
T KOG0207|consen 611 -------------------SLKEALALVAAM--------------ESGSEHPIGKAIVDYAKEKLVE-----PNPE---- 648 (951)
T ss_pred -------------------cHHHHHHHHHHH--------------hcCCcCchHHHHHHHHHhcccc-----cCcc----
Confidence 111233222211 2225899999999999987611 1111
Q ss_pred cCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEE
Q 002391 583 RYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTL 662 (928)
Q Consensus 583 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l 662 (928)
.++..-.|........+.+. +.. .+-|.-+.|. .++....+.+...+++-...|..+.
T Consensus 649 -------------~~~~~~~~pg~g~~~~~~~~---~~~--i~iGN~~~~~----r~~~~~~~~i~~~~~~~e~~g~tvv 706 (951)
T KOG0207|consen 649 -------------GVLSFEYFPGEGIYVTVTVD---GNE--VLIGNKEWMS----RNGCSIPDDILDALTESERKGQTVV 706 (951)
T ss_pred -------------ccceeecccCCCcccceEEe---eeE--EeechHHHHH----hcCCCCchhHHHhhhhHhhcCceEE
Confidence 11111122222211111211 111 3336654442 2333345567778888889999999
Q ss_pred EEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcC
Q 002391 663 ALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTG 742 (928)
Q Consensus 663 ~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTG 742 (928)
++|. |-+++|+++++|++|+++..+|+.||+.||++.|+||
T Consensus 707 ~v~v---------------------------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTG 747 (951)
T KOG0207|consen 707 YVAV---------------------------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTG 747 (951)
T ss_pred EEEE---------------------------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcC
Confidence 9984 6789999999999999999999999999999999999
Q ss_pred CchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhh
Q 002391 743 DKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALE 822 (928)
Q Consensus 743 D~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~ 822 (928)
|+..+|.++|+++|+
T Consensus 748 Dn~~aA~svA~~VGi----------------------------------------------------------------- 762 (951)
T KOG0207|consen 748 DNDAAARSVAQQVGI----------------------------------------------------------------- 762 (951)
T ss_pred CCHHHHHHHHHhhCc-----------------------------------------------------------------
Confidence 999999999999995
Q ss_pred HHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecC-CchhHHHHhCcee
Q 002391 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG-VEGMQIVLSGHDM 901 (928)
Q Consensus 823 ~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g-~e~~~a~~aaD~v 901 (928)
..|+|.+.|+||++.|+.+|+ .+..|+|+|||.||+|+|.+|||||+|+. ++. |.++||++
T Consensus 763 ---------------~~V~aev~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPALA~AdVGIaig~gs~v--AieaADIV 824 (951)
T KOG0207|consen 763 ---------------DNVYAEVLPEQKAEKIKEIQK-NGGPVAMVGDGINDAPALAQADVGIAIGAGSDV--AIEAADIV 824 (951)
T ss_pred ---------------ceEEeccCchhhHHHHHHHHh-cCCcEEEEeCCCCccHHHHhhccceeeccccHH--HHhhCCEE
Confidence 129999999999999999998 68999999999999999999999999954 444 99999999
Q ss_pred ccccc----ccccccchhhHHHHhHHhh
Q 002391 902 RKCIQ----VFAFDIADCSLKIAKFATF 925 (928)
Q Consensus 902 ~~~~~----~~~~~~~~~~~~~i~~~~~ 925 (928)
+.-.+ +.++++||++++.||.+-+
T Consensus 825 Lmrn~L~~v~~ai~LSrkt~~rIk~N~~ 852 (951)
T KOG0207|consen 825 LMRNDLRDVPFAIDLSRKTVKRIKLNFV 852 (951)
T ss_pred EEccchhhhHHHHHHHHHHHhhHHHHHH
Confidence 88554 4599999999999998754
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-59 Score=547.99 Aligned_cols=474 Identities=23% Similarity=0.261 Sum_probs=366.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhh------ccceEEEEeCCc-eEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceE
Q 002391 114 GVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNG-VFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGIC 186 (928)
Q Consensus 114 ~~~~~~~~~~d~~r~k~~~~~------n~~~~~V~~r~g-~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~ 186 (928)
++..+..+++.+.++++.+.+ +...++|+ |+| +++++++++|+|||+|.|++||.|||||+|++ |.+
T Consensus 26 ~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~-r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~-----g~~ 99 (556)
T TIGR01525 26 FLFLLGETLEERAKGRASDALSALLALAPSTARVL-QGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS-----GES 99 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe-----cce
Confidence 333444555555555554433 34679999 674 99999999999999999999999999999999 779
Q ss_pred EEEeecCCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCe
Q 002391 187 YVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAH 266 (928)
Q Consensus 187 ~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~ 266 (928)
.||||.|||||.|+.|.+++.. |+||.+.+|.
T Consensus 100 ~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~g~--------------------- 131 (556)
T TIGR01525 100 EVDESALTGESMPVEKKEGDEV---------------------------FAGTINGDGS--------------------- 131 (556)
T ss_pred EEeehhccCCCCCEecCCcCEE---------------------------eeceEECCce---------------------
Confidence 9999999999999999987654 9999999888
Q ss_pred EEEEEEEecCcceeeecC---CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCcccc
Q 002391 267 VYGSVIFTGHDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYF 343 (928)
Q Consensus 267 ~~gvVv~tG~~Tki~~~~---~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (928)
++++|+.||.+|.+++.. ..+..+++++++.+++++.++.++.++++++.+++|.+...
T Consensus 132 ~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~------------------ 193 (556)
T TIGR01525 132 LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA------------------ 193 (556)
T ss_pred EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------------------
Confidence 999999999999776543 34566789999999999999999999999888877643211
Q ss_pred CCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCC
Q 002391 344 NPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKT 423 (928)
Q Consensus 344 ~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKT 423 (928)
...+..++.+++.+|||+|+++++++...+..++ .++++++|+++.+|.||+++++|||||
T Consensus 194 ---------~~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~~~~le~l~~v~~i~fDKT 254 (556)
T TIGR01525 194 ---------LGALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKGGDALEKLAKVKTVVFDKT 254 (556)
T ss_pred ---------chHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecCchHHHHhhcCCEEEEeCC
Confidence 0467789999999999999999999999998888 789999999999999999999999999
Q ss_pred CceeeceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCc
Q 002391 424 GTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFN 503 (928)
Q Consensus 424 GTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (928)
||||+|+|++.++...+... .
T Consensus 255 GTLT~~~~~v~~~~~~~~~~---~-------------------------------------------------------- 275 (556)
T TIGR01525 255 GTLTTGKPTVVDVEPLDDAS---I-------------------------------------------------------- 275 (556)
T ss_pred CCCcCCceEEEEEEecCCCC---c--------------------------------------------------------
Confidence 99999999999886543210 0
Q ss_pred ccchhhcccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEec
Q 002391 504 FEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRER 583 (928)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~ 583 (928)
...+++...+.+. ..+.||.+.|+++++++.|..... +
T Consensus 276 ------------------~~~~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~~~~~~--~-------- 313 (556)
T TIGR01525 276 ------------------SEEELLALAAALE--------------QSSSHPLARAIVRYAKKRGLELPK--Q-------- 313 (556)
T ss_pred ------------------cHHHHHHHHHHHh--------------ccCCChHHHHHHHHHHhcCCCccc--c--------
Confidence 0012222222111 124799999999999987643211 0
Q ss_pred CCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEE
Q 002391 584 YPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLA 663 (928)
Q Consensus 584 ~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~ 663 (928)
++ ...++ .+.+...+ +|. ..+..|+++.+ + .... ........++.++.+|+|++.
T Consensus 314 -----------~~-~~~~~----~~gi~~~~---~g~-~~~~lg~~~~~-~---~~~~-~~~~~~~~~~~~~~~g~~~~~ 368 (556)
T TIGR01525 314 -----------ED-VEEVP----GKGVEATV---DGQ-EEVRIGNPRLL-E---LAAE-PISASPDLLNEGESQGKTVVF 368 (556)
T ss_pred -----------cC-eeEec----CCeEEEEE---CCe-eEEEEecHHHH-h---hcCC-CchhhHHHHHHHhhCCcEEEE
Confidence 00 00000 11222222 121 12334666544 1 1111 122234566778899999999
Q ss_pred EEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcC-CcEEEEcC
Q 002391 664 LAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAG-LKIWVLTG 742 (928)
Q Consensus 664 ~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aG-Ikv~mlTG 742 (928)
++ .|.+++|.+.++|+++|+++++|+.|+++| ++++|+||
T Consensus 369 v~---------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTg 409 (556)
T TIGR01525 369 VA---------------------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTG 409 (556)
T ss_pred EE---------------------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeC
Confidence 98 356899999999999999999999999999 99999999
Q ss_pred CchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhh
Q 002391 743 DKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALE 822 (928)
Q Consensus 743 D~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~ 822 (928)
|+..++..+++++|+-
T Consensus 410 d~~~~a~~i~~~lgi~---------------------------------------------------------------- 425 (556)
T TIGR01525 410 DNRSAAEAVAAELGID---------------------------------------------------------------- 425 (556)
T ss_pred CCHHHHHHHHHHhCCC----------------------------------------------------------------
Confidence 9999999999999982
Q ss_pred HHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceec
Q 002391 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMR 902 (928)
Q Consensus 823 ~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~ 902 (928)
.+|++..|++|..+++.++. .++.|+|+|||.||++|++.||+||++++ ....++..||++.
T Consensus 426 ----------------~~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~-~~~~~~~~Ad~vi 487 (556)
T TIGR01525 426 ----------------EVHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPALAAADVGIAMGA-GSDVAIEAADIVL 487 (556)
T ss_pred ----------------eeeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHHhhCCEeEEeCC-CCHHHHHhCCEEE
Confidence 16778899999999999997 68899999999999999999999999964 3334888999998
Q ss_pred cccc----ccccccchhhHHHHhHHhh
Q 002391 903 KCIQ----VFAFDIADCSLKIAKFATF 925 (928)
Q Consensus 903 ~~~~----~~~~~~~~~~~~~i~~~~~ 925 (928)
..++ ..++++||++.++|+.+..
T Consensus 488 ~~~~~~~l~~~i~~~r~~~~~i~~nl~ 514 (556)
T TIGR01525 488 LNDDLSSLPTAIDLSRKTRRIIKQNLA 514 (556)
T ss_pred eCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7444 4489999999999887653
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-58 Score=544.33 Aligned_cols=460 Identities=21% Similarity=0.265 Sum_probs=363.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhh------ccceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCc
Q 002391 111 IVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (928)
Q Consensus 111 ~vl~~~~~~~~~~d~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G 184 (928)
+++++..+.+++|++.++++.+.+ ...++++++++|.+++|+.++|+|||+|.|++||.|||||+|++ |
T Consensus 59 ~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~-----g 133 (562)
T TIGR01511 59 MLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE-----G 133 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE-----C
Confidence 344444555777777666654433 34678888556888999999999999999999999999999999 7
Q ss_pred eEEEEeecCCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecC
Q 002391 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (928)
Q Consensus 185 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt 264 (928)
.+.||||.|||||.|+.|.+++.. |+||++.+|.
T Consensus 134 ~~~vdes~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~g~------------------- 167 (562)
T TIGR01511 134 ESEVDESLVTGESLPVPKKVGDPV---------------------------IAGTVNGTGS------------------- 167 (562)
T ss_pred ceEEehHhhcCCCCcEEcCCCCEE---------------------------EeeeEECCce-------------------
Confidence 799999999999999999998766 9999999998
Q ss_pred CeEEEEEEEecCcceeeec---CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCcc
Q 002391 265 AHVYGSVIFTGHDSKVMQN---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (928)
Q Consensus 265 ~~~~gvVv~tG~~Tki~~~---~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 341 (928)
+.+.|+.+|.+|.+.+. ...++.+++++++.+++++.++++++++++++.+++|.
T Consensus 168 --~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-------------------- 225 (562)
T TIGR01511 168 --LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-------------------- 225 (562)
T ss_pred --EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 99999999999976543 44667778999999999999999998888887766542
Q ss_pred ccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEec
Q 002391 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421 (928)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~D 421 (928)
..+.+++.+++.+|||+|+++++++...+...+ +++++++|+.+.+|.|+++++||||
T Consensus 226 ------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 226 ------------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred ------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHHHHHhhCCCEEEEC
Confidence 256779999999999999999999999988888 8999999999999999999999999
Q ss_pred CCCceeeceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCC
Q 002391 422 KTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKG 501 (928)
Q Consensus 422 KTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (928)
||||||+|+|++..+...+.. +
T Consensus 284 KTGTLT~g~~~v~~i~~~~~~-----~----------------------------------------------------- 305 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHVFGDR-----D----------------------------------------------------- 305 (562)
T ss_pred CCCCCcCCCEEEEEEecCCCC-----C-----------------------------------------------------
Confidence 999999999999987542210 0
Q ss_pred CcccchhhcccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEE
Q 002391 502 FNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIR 581 (928)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~ 581 (928)
..+++..++.. +..+.||.+.|+++++++.|.....-
T Consensus 306 ---------------------~~~~l~~aa~~--------------e~~s~HPia~Ai~~~~~~~~~~~~~~-------- 342 (562)
T TIGR01511 306 ---------------------RTELLALAAAL--------------EAGSEHPLAKAIVSYAKEKGITLVEV-------- 342 (562)
T ss_pred ---------------------HHHHHHHHHHH--------------hccCCChHHHHHHHHHHhcCCCcCCC--------
Confidence 01222222211 11246999999999998876432110
Q ss_pred ecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeE
Q 002391 582 ERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRT 661 (928)
Q Consensus 582 ~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~ 661 (928)
..++ .+| .+.+...+ +| ..+..|+++.+.+. +.. +.++..+|.++
T Consensus 343 -----------~~~~---~~~----g~Gi~~~~---~g--~~~~iG~~~~~~~~----~~~--------~~~~~~~g~~~ 387 (562)
T TIGR01511 343 -----------SDFK---AIP----GIGVEGTV---EG--TKIQLGNEKLLGEN----AIK--------IDGKAEQGSTS 387 (562)
T ss_pred -----------CCeE---EEC----CceEEEEE---CC--EEEEEECHHHHHhC----CCC--------CChhhhCCCEE
Confidence 0011 000 12222222 22 22445887665321 111 11245789888
Q ss_pred EEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEc
Q 002391 662 LALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLT 741 (928)
Q Consensus 662 l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlT 741 (928)
+.++ .|.+++|+++++|+++++++++|+.|++.|++++|+|
T Consensus 388 ~~~~---------------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilS 428 (562)
T TIGR01511 388 VLVA---------------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLT 428 (562)
T ss_pred EEEE---------------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEc
Confidence 8877 4778999999999999999999999999999999999
Q ss_pred CCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhh
Q 002391 742 GDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (928)
Q Consensus 742 GD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~ 821 (928)
||+..+|..+++++|+-
T Consensus 429 gd~~~~a~~ia~~lgi~--------------------------------------------------------------- 445 (562)
T TIGR01511 429 GDNRKTAKAVAKELGIN--------------------------------------------------------------- 445 (562)
T ss_pred CCCHHHHHHHHHHcCCc---------------------------------------------------------------
Confidence 99999999999999981
Q ss_pred hHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCcee
Q 002391 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDM 901 (928)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v 901 (928)
++++..|++|..+++.++. .++.|+|+|||.||++|++.||+||+|+... ..++..||++
T Consensus 446 ------------------~~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vgia~g~g~-~~a~~~Advv 505 (562)
T TIGR01511 446 ------------------VRAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALAQADVGIAIGAGT-DVAIEAADVV 505 (562)
T ss_pred ------------------EEccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHhhCCEEEEeCCcC-HHHHhhCCEE
Confidence 4456789999999999997 7889999999999999999999999996432 3388999999
Q ss_pred cc------cccccccccchhhHHHHhHHhh
Q 002391 902 RK------CIQVFAFDIADCSLKIAKFATF 925 (928)
Q Consensus 902 ~~------~~~~~~~~~~~~~~~~i~~~~~ 925 (928)
+. ++. ++++||++.++|+.+.+
T Consensus 506 l~~~~l~~l~~--~i~lsr~~~~~i~qn~~ 533 (562)
T TIGR01511 506 LMRNDLNDVAT--AIDLSRKTLRRIKQNLL 533 (562)
T ss_pred EeCCCHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 85 555 89999999999998654
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-57 Score=530.74 Aligned_cols=466 Identities=20% Similarity=0.224 Sum_probs=359.2
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHhhhhhh---hccceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEE
Q 002391 101 SPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKE---VNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFL 177 (928)
Q Consensus 101 ~~~~~~~~l~~vl~~~~~~~~~~d~~r~k~~~~---~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL 177 (928)
.|+.... +++++++....+.+.+++..+..+. ++..+++|+ |+|+++++++++|+|||+|.|++||.|||||+++
T Consensus 17 ~~~~~~~-i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~-r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii 94 (536)
T TIGR01512 17 EYLEGAL-LLLLFSIGETLEEYASGRARRALKALMELAPDTARVL-RGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVL 94 (536)
T ss_pred hHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEE
Confidence 3444433 3344444444444444444333332 345789999 8999999999999999999999999999999999
Q ss_pred eecCCCceEEEEeecCCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeec
Q 002391 178 SSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLR 257 (928)
Q Consensus 178 ~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~r 257 (928)
+ |.+.||||+|||||.|+.|.+++.. |+||.+.+|.
T Consensus 95 ~-----g~~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~G~------------ 130 (536)
T TIGR01512 95 S-----GTSTVDESALTGESVPVEKAPGDEV---------------------------FAGAINLDGV------------ 130 (536)
T ss_pred e-----CcEEEEecccCCCCCcEEeCCCCEE---------------------------EeeeEECCce------------
Confidence 9 7799999999999999999987654 9999999988
Q ss_pred ccEEecCCeEEEEEEEecCcceeeecC---CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCcccc
Q 002391 258 DSKLRNTAHVYGSVIFTGHDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYL 334 (928)
Q Consensus 258 gs~l~nt~~~~gvVv~tG~~Tki~~~~---~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~ 334 (928)
++++|+.||.+|.+++.. ..++.+++++++.+++++.++.+++++++++.++++++... |
T Consensus 131 ---------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-- 193 (536)
T TIGR01512 131 ---------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR------W-- 193 (536)
T ss_pred ---------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------c--
Confidence 999999999999776544 34566789999999999999999998888877766543211 1
Q ss_pred CCCCCccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhccc
Q 002391 335 KPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQ 414 (928)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~ 414 (928)
...+.+++.+++.+|||+|+++++++...+..++ .++++++|+++.+|.||+
T Consensus 194 ------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~----------~k~gilik~~~~le~l~~ 245 (536)
T TIGR01512 194 ------------------PFWVYRALVLLVVASPCALVISAPAAYLSAISAA----------ARHGILIKGGAALEALAK 245 (536)
T ss_pred ------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH----------HHCCeEEcCcHHHHhhcC
Confidence 1267788999999999999999999999998888 899999999999999999
Q ss_pred ceEEEecCCCceeeceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCc
Q 002391 415 VDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGND 494 (928)
Q Consensus 415 v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (928)
++++|||||||||+|+|++.++...
T Consensus 246 v~~i~fDKTGTLT~~~~~v~~~~~~------------------------------------------------------- 270 (536)
T TIGR01512 246 IKTVAFDKTGTLTTGRPKVVDVVPA------------------------------------------------------- 270 (536)
T ss_pred CCEEEECCCCCCcCCceEEEEeeHH-------------------------------------------------------
Confidence 9999999999999999999876320
Q ss_pred cccccCCCcccchhhcccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEc
Q 002391 495 FKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRT 574 (928)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~ 574 (928)
+++...+.+ +..+.||.+.|+++++++.+ .+
T Consensus 271 ------------------------------~~l~~a~~~--------------e~~~~hp~~~Ai~~~~~~~~-~~---- 301 (536)
T TIGR01512 271 ------------------------------EVLRLAAAA--------------EQASSHPLARAIVDYARKRE-NV---- 301 (536)
T ss_pred ------------------------------HHHHHHHHH--------------hccCCCcHHHHHHHHHHhcC-CC----
Confidence 111121111 11247999999999998754 10
Q ss_pred CCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHH
Q 002391 575 QSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEY 654 (928)
Q Consensus 575 ~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~ 654 (928)
.. . ..+| .+.+...+ +|..+ ..|+++.+.+. + ...+
T Consensus 302 -~~-----------------~---~~~~----g~gi~~~~---~g~~~--~ig~~~~~~~~----~----------~~~~ 337 (536)
T TIGR01512 302 -ES-----------------V---EEVP----GEGVRAVV---DGGEV--RIGNPRSLEAA----V----------GARP 337 (536)
T ss_pred -cc-----------------e---EEec----CCeEEEEE---CCeEE--EEcCHHHHhhc----C----------Ccch
Confidence 00 0 0011 11122211 23322 24776543221 1 0145
Q ss_pred HhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcC
Q 002391 655 GEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAG 734 (928)
Q Consensus 655 ~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aG 734 (928)
..+|.+++.++ .|..++|.+.++|+++++++++|+.|+++|
T Consensus 338 ~~~~~~~~~v~---------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~G 378 (536)
T TIGR01512 338 ESAGKTIVHVA---------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALG 378 (536)
T ss_pred hhCCCeEEEEE---------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcC
Confidence 66787777666 467899999999999999999999999999
Q ss_pred C-cEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEc
Q 002391 735 L-KIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIE 813 (928)
Q Consensus 735 I-kv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~ 813 (928)
+ +++|+|||+..+|..+++++|+..
T Consensus 379 i~~v~vvTgd~~~~a~~i~~~lgi~~------------------------------------------------------ 404 (536)
T TIGR01512 379 IEKVVMLTGDRRAVAERVARELGIDE------------------------------------------------------ 404 (536)
T ss_pred CCcEEEEcCCCHHHHHHHHHHcCChh------------------------------------------------------
Confidence 9 999999999999999999999821
Q ss_pred CchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhH
Q 002391 814 GKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQ 893 (928)
Q Consensus 814 G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~ 893 (928)
+|++..|++|..+++.++. .++.|+|+|||.||++|++.||+||+++......
T Consensus 405 --------------------------~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~ 457 (536)
T TIGR01512 405 --------------------------VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPALAAADVGIAMGASGSDV 457 (536)
T ss_pred --------------------------hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHH
Confidence 4567789999999999997 7889999999999999999999999996233334
Q ss_pred HHHhCceeccccc----ccccccchhhHHHHhHHhh
Q 002391 894 IVLSGHDMRKCIQ----VFAFDIADCSLKIAKFATF 925 (928)
Q Consensus 894 a~~aaD~v~~~~~----~~~~~~~~~~~~~i~~~~~ 925 (928)
++.+||+++..++ ..++++||++.++|+.+.+
T Consensus 458 ~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~ 493 (536)
T TIGR01512 458 AIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVV 493 (536)
T ss_pred HHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999984322 3389999999999987754
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-56 Score=552.79 Aligned_cols=474 Identities=20% Similarity=0.231 Sum_probs=376.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhc------cceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCc
Q 002391 111 IVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (928)
Q Consensus 111 ~vl~~~~~~~~~~d~~r~k~~~~~n------~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G 184 (928)
+++++..+.+++|.+.+.|+.+.+. ..+++|+ |+|.+++|+.++|+|||+|.|++||.|||||+|++ |
T Consensus 291 ~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~-~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~-----g 364 (834)
T PRK10671 291 MIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVV-TDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ-----G 364 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE-eCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE-----c
Confidence 4445556678888888877655443 4778999 79999999999999999999999999999999999 7
Q ss_pred eEEEEeecCCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecC
Q 002391 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (928)
Q Consensus 185 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt 264 (928)
.+.||||.|||||.|+.|.+++.. |+||++.+|.
T Consensus 365 ~~~vdeS~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~G~------------------- 398 (834)
T PRK10671 365 EAWLDEAMLTGEPIPQQKGEGDSV---------------------------HAGTVVQDGS------------------- 398 (834)
T ss_pred eEEEeehhhcCCCCCEecCCCCEE---------------------------Eecceeccee-------------------
Confidence 799999999999999999998766 9999999998
Q ss_pred CeEEEEEEEecCcceeee---cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCcc
Q 002391 265 AHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (928)
Q Consensus 265 ~~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 341 (928)
+.+.|+.+|.+|.+.+ ..+.++..++++++.+++++.++++++++++++++++|.+... |
T Consensus 399 --~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~------~--------- 461 (834)
T PRK10671 399 --VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP------A--------- 461 (834)
T ss_pred --EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------c---------
Confidence 9999999999996644 4445666789999999999999999999999888877654211 0
Q ss_pred ccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEec
Q 002391 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421 (928)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~D 421 (928)
......+.+++.+++.+|||+|+++++++...+..++ +++++++|+.+.+|.||+++++|||
T Consensus 462 --------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le~l~~v~~v~fD 523 (834)
T PRK10671 462 --------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQRASTLDTLVFD 523 (834)
T ss_pred --------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHHhhcCCCEEEEc
Confidence 0112467789999999999999999999999998888 8999999999999999999999999
Q ss_pred CCCceeeceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCC
Q 002391 422 KTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKG 501 (928)
Q Consensus 422 KTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (928)
||||||+|+|++..+...+.. ++
T Consensus 524 KTGTLT~g~~~v~~~~~~~~~-----~~---------------------------------------------------- 546 (834)
T PRK10671 524 KTGTLTEGKPQVVAVKTFNGV-----DE---------------------------------------------------- 546 (834)
T ss_pred CCCccccCceEEEEEEccCCC-----CH----------------------------------------------------
Confidence 999999999999887532110 00
Q ss_pred CcccchhhcccCCCCCCChHHHHHHHH-HHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEE
Q 002391 502 FNFEDSRLMDGNWLKEPNVDTLLLFFR-ILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580 (928)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i 580 (928)
.+++. +.+++. .+.||.+.|++++++..... .
T Consensus 547 ----------------------~~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~--~-------- 579 (834)
T PRK10671 547 ----------------------AQALRLAAALEQ---------------GSSHPLARAILDKAGDMTLP--Q-------- 579 (834)
T ss_pred ----------------------HHHHHHHHHHhC---------------CCCCHHHHHHHHHHhhCCCC--C--------
Confidence 01121 222221 14799999999988643210 0
Q ss_pred EecCCCCCCCceeEEEEEEeecCCCCC-ceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCC
Q 002391 581 RERYPPKGQPVEREFKILNLLDFTSKR-KRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (928)
Q Consensus 581 ~~~~~~~~~~~~~~~~il~~~~F~s~r-krmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Gl 659 (928)
...++ ... +.+... .+|. .+..|+++.+.+. + ...+.+...++.+..+|.
T Consensus 580 -----------~~~~~--------~~~g~Gv~~~---~~g~--~~~~G~~~~~~~~----~-~~~~~~~~~~~~~~~~g~ 630 (834)
T PRK10671 580 -----------VNGFR--------TLRGLGVSGE---AEGH--ALLLGNQALLNEQ----Q-VDTKALEAEITAQASQGA 630 (834)
T ss_pred -----------cccce--------EecceEEEEE---ECCE--EEEEeCHHHHHHc----C-CChHHHHHHHHHHHhCCC
Confidence 01111 111 111111 1333 3455998876432 1 112345666778889999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEE
Q 002391 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (928)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~m 739 (928)
+++.+|+ |..++|+++++|++|++++++|+.|++.|++++|
T Consensus 631 ~~v~va~---------------------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~ 671 (834)
T PRK10671 631 TPVLLAV---------------------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVM 671 (834)
T ss_pred eEEEEEE---------------------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEE
Confidence 9999984 4568999999999999999999999999999999
Q ss_pred EcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhH
Q 002391 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (928)
Q Consensus 740 lTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (928)
+|||+..+|..+++++|+..
T Consensus 672 ~Tgd~~~~a~~ia~~lgi~~------------------------------------------------------------ 691 (834)
T PRK10671 672 LTGDNPTTANAIAKEAGIDE------------------------------------------------------------ 691 (834)
T ss_pred EcCCCHHHHHHHHHHcCCCE------------------------------------------------------------
Confidence 99999999999999999821
Q ss_pred hhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCc
Q 002391 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGH 899 (928)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD 899 (928)
++++..|++|.++++.++. .++.|+|+|||.||++|++.||+||+|++. ...++++||
T Consensus 692 --------------------~~~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgia~g~g-~~~a~~~ad 749 (834)
T PRK10671 692 --------------------VIAGVLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPALAQADVGIAMGGG-SDVAIETAA 749 (834)
T ss_pred --------------------EEeCCCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeEEecCC-CHHHHHhCC
Confidence 6777889999999999997 688999999999999999999999999653 334899999
Q ss_pred eeccccc----ccccccchhhHHHHhHHhh
Q 002391 900 DMRKCIQ----VFAFDIADCSLKIAKFATF 925 (928)
Q Consensus 900 ~v~~~~~----~~~~~~~~~~~~~i~~~~~ 925 (928)
+++...+ ..++++||++.++||.+.+
T Consensus 750 ~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~ 779 (834)
T PRK10671 750 ITLMRHSLMGVADALAISRATLRNMKQNLL 779 (834)
T ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987544 4489999999999998765
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-50 Score=429.42 Aligned_cols=483 Identities=19% Similarity=0.257 Sum_probs=358.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhcc----ceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCC
Q 002391 107 LPLAIVVGVSMAKEALEDWRRFMQDKEVNA----RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (928)
Q Consensus 107 ~~l~~vl~~~~~~~~~~d~~r~k~~~~~n~----~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~ 182 (928)
+.|+|.+++.-+-|++.+-|-+.+-..+.. ..+++++.+|.++.+++.+|+.||+|+|+.||.||+||-+++
T Consensus 70 ~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe---- 145 (681)
T COG2216 70 IILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE---- 145 (681)
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe----
Confidence 334455555556677666554444333332 345666456999999999999999999999999999999999
Q ss_pred CceEEEEeecCCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEe
Q 002391 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (928)
Q Consensus 183 ~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~ 262 (928)
|.++||||++||||.|+.|.++...... -. |+.+.
T Consensus 146 -G~asVdESAITGESaPViresGgD~ssV------------------------tG--------------------gT~v~ 180 (681)
T COG2216 146 -GVASVDESAITGESAPVIRESGGDFSSV------------------------TG--------------------GTRVL 180 (681)
T ss_pred -eeeecchhhccCCCcceeeccCCCcccc------------------------cC--------------------CcEEe
Confidence 9999999999999999999997543110 12 22333
Q ss_pred cCCeEEEEEEEecCccee---eecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCC
Q 002391 263 NTAHVYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (928)
Q Consensus 263 nt~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 339 (928)
++|+...++..-.+|.+ ....+.+..+++|-|..++-+..-+.+ +|++++.+..-+..|.. .
T Consensus 181 -SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTl-iFL~~~~Tl~p~a~y~~---------g---- 245 (681)
T COG2216 181 -SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTL-IFLLAVATLYPFAIYSG---------G---- 245 (681)
T ss_pred -eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHH-HHHHHHHhhhhHHHHcC---------C----
Confidence 68899999988888844 456678888889988887765443322 11122221111111110 0
Q ss_pred ccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEE
Q 002391 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (928)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~ 419 (928)
.-..+...+.++++++|..+.-.++-+-..++-++ .+.++++++..++|..|.||+++
T Consensus 246 ------------~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv----------~~~NViA~SGRAVEaaGDvdtli 303 (681)
T COG2216 246 ------------GAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV----------TQFNVIATSGRAVEAAGDVDTLL 303 (681)
T ss_pred ------------CCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHh----------hhhceeecCcchhhhcCCccEEE
Confidence 01244556778889999988877776666666666 78899999999999999999999
Q ss_pred ecCCCceeeceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCcccccc
Q 002391 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (928)
Q Consensus 420 ~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (928)
.|||||+|-|+-.-..+...+.
T Consensus 304 LDKTGTIT~GnR~A~~f~p~~g---------------------------------------------------------- 325 (681)
T COG2216 304 LDKTGTITLGNRQASEFIPVPG---------------------------------------------------------- 325 (681)
T ss_pred ecccCceeecchhhhheecCCC----------------------------------------------------------
Confidence 9999999977644333221110
Q ss_pred CCCcccchhhcccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEE
Q 002391 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (928)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~ 579 (928)
...+++..+..+++-. -+.|....+++.|++.|+....+..
T Consensus 326 ---------------------v~~~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~~~~~~---- 366 (681)
T COG2216 326 ---------------------VSEEELADAAQLASLA--------------DETPEGRSIVELAKKLGIELREDDL---- 366 (681)
T ss_pred ---------------------CCHHHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCCCcccc----
Confidence 0122344444444222 2478889999999999855433110
Q ss_pred EEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCC
Q 002391 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (928)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Gl 659 (928)
. .--...||+.+.|...+-.. ++ .-+-|||.+.|.......+...++.++...++-+..|-
T Consensus 367 -------------~--~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GG 427 (681)
T COG2216 367 -------------Q--SHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGG 427 (681)
T ss_pred -------------c--ccceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCC
Confidence 0 01245799988766665543 33 66789999999999987777788999999999999999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEE
Q 002391 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (928)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~m 739 (928)
.+|+++ .|-.++|++.++|-+++|.+|-+.+||+.|||.+|
T Consensus 428 TPL~V~---------------------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM 468 (681)
T COG2216 428 TPLVVV---------------------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVM 468 (681)
T ss_pred CceEEE---------------------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEE
Confidence 999999 46789999999999999999999999999999999
Q ss_pred EcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhH
Q 002391 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (928)
Q Consensus 740 lTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (928)
+|||++.||..||.+.|+..
T Consensus 469 ~TGDN~~TAa~IA~EAGVDd------------------------------------------------------------ 488 (681)
T COG2216 469 ITGDNPLTAAAIAAEAGVDD------------------------------------------------------------ 488 (681)
T ss_pred EeCCCHHHHHHHHHHhCchh------------------------------------------------------------
Confidence 99999999999999999831
Q ss_pred hhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEe-cCCchhHHHHhC
Q 002391 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGMQIVLSG 898 (928)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~-~g~e~~~a~~aa 898 (928)
..+.++|++|.++++.-|. .|+.|+|+|||.||+|+|.+||||+|| +|+.. ||+++
T Consensus 489 --------------------fiAeatPEdK~~~I~~eQ~-~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqA--AkEAa 545 (681)
T COG2216 489 --------------------FIAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAA 545 (681)
T ss_pred --------------------hhhcCChHHHHHHHHHHHh-cCcEEEEcCCCCCcchhhhhcchhhhhccccHH--HHHhh
Confidence 4567999999999999998 899999999999999999999999999 33443 99999
Q ss_pred cee------cccccccccccchh
Q 002391 899 HDM------RKCIQVFAFDIADC 915 (928)
Q Consensus 899 D~v------~~~~~~~~~~~~~~ 915 (928)
++| +++.+ .++++++
T Consensus 546 NMVDLDS~PTKlie--vV~IGKq 566 (681)
T COG2216 546 NMVDLDSNPTKLIE--VVEIGKQ 566 (681)
T ss_pred cccccCCCccceeh--Hhhhhhh
Confidence 998 34444 5555555
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-31 Score=277.29 Aligned_cols=222 Identities=25% Similarity=0.361 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcc---ce-EEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCc
Q 002391 109 LAIVVGVSMAKEALEDWRRFMQDKEVNA---RK-VSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (928)
Q Consensus 109 l~~vl~~~~~~~~~~d~~r~k~~~~~n~---~~-~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G 184 (928)
++++++++.+.+.++++++++..+.+++ .+ ++|+ |||++++++|++|+|||||+|++||.+||||++|+ +|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~-r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g 76 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVI-RDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEE-ETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SS
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEE-eccccccchHhhccceeeeecccccccccCcccee----cc
Confidence 5677788888899999999999887765 34 8888 89999999999999999999999999999999998 37
Q ss_pred eEEEEeecCCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecC
Q 002391 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (928)
Q Consensus 185 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt 264 (928)
.++||||.||||+.|+.|.+. +++..|++++||.+. +
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~-~ 113 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV-S 113 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-E
T ss_pred ccccccccccccccccccccc------------------------------------------cccccchhhcccccc-c
Confidence 799999999999999999873 467789999999999 8
Q ss_pred CeEEEEEEEecCcceeeecCC---CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCcc
Q 002391 265 AHVYGSVIFTGHDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (928)
Q Consensus 265 ~~~~gvVv~tG~~Tki~~~~~---~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 341 (928)
||++|+|++||.+|+++++.. ..+.+++++++.++++..+++++.++++++++++++++ .....|+
T Consensus 114 g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------- 182 (230)
T PF00122_consen 114 GWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN---DSGISFF-------- 182 (230)
T ss_dssp EEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG---STTCHCC--------
T ss_pred cccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec---ccccccc--------
Confidence 999999999999997655444 55667799999999999999998888888887665553 1111332
Q ss_pred ccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhh
Q 002391 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEE 411 (928)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~ 411 (928)
..|..++.+++.++|++|++++++....++.++ .++++++|+++.+|.
T Consensus 183 ------------~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 183 ------------KSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp ------------HHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred ------------cccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 578889999999999999999999999999998 789999999999884
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-20 Score=196.39 Aligned_cols=97 Identities=29% Similarity=0.506 Sum_probs=90.4
Q ss_pred ccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHh
Q 002391 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKD 785 (928)
Q Consensus 706 dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~ 785 (928)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+++++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 78899999999999999999999999999999999999999999999999992
Q ss_pred hHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEc--ChhhH--HHHHHHHhhcCC
Q 002391 786 NILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRV--SPKQK--ALVTRLVKEGTG 861 (928)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~--~P~qK--~~iV~~l~~~~g 861 (928)
+..+++++ +|++| ..+++.++. .+
T Consensus 168 ---------------------------------------------------~~~v~a~~~~kP~~k~~~~~i~~l~~-~~ 195 (215)
T PF00702_consen 168 ---------------------------------------------------DSIVFARVIGKPEPKIFLRIIKELQV-KP 195 (215)
T ss_dssp ---------------------------------------------------SEEEEESHETTTHHHHHHHHHHHHTC-TG
T ss_pred ---------------------------------------------------cccccccccccccchhHHHHHHHHhc-CC
Confidence 14489999 99999 999999985 45
Q ss_pred CEEEEEcCCcccHHHHHhCC
Q 002391 862 KTTLAIGDGANDVGMIQEAD 881 (928)
Q Consensus 862 ~~vlaiGDG~ND~~mL~~Ad 881 (928)
..|+|+|||.||++|+++||
T Consensus 196 ~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 196 GEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp GGEEEEESSGGHHHHHHHSS
T ss_pred CEEEEEccCHHHHHHHHhCc
Confidence 69999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.49 E-value=3e-14 Score=125.51 Aligned_cols=90 Identities=36% Similarity=0.591 Sum_probs=71.1
Q ss_pred hhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCcee
Q 002391 531 AICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRM 610 (928)
Q Consensus 531 ~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 610 (928)
+|||++....+++....+ ..|+|+|.||+.|+.++|..+.. ...+..|++++.+||+|+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 589999876555333322 56899999999999999754321 1136789999999999999999
Q ss_pred EEEEEcCCCcEEEEEccchhhhHHhhcc
Q 002391 611 SVIVRDEDGQILLLCKGADSIIFDRLSK 638 (928)
Q Consensus 611 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 638 (928)
+||++ .++.+++|+|||||.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3346788999999999999974
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.5e-13 Score=119.37 Aligned_cols=120 Identities=24% Similarity=0.362 Sum_probs=103.1
Q ss_pred cEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhh
Q 002391 707 LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDN 786 (928)
Q Consensus 707 l~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 786 (928)
+...+.++---+|=++++++|+.|++. ++|+++|||..-+....|+-.|+-.
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~--------------------------- 70 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV--------------------------- 70 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce---------------------------
Confidence 457788888889999999999999999 9999999999999999999988631
Q ss_pred HHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEE
Q 002391 787 ILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLA 866 (928)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vla 866 (928)
-.+++...|+.|+.+++.+++ +++.|.|
T Consensus 71 ---------------------------------------------------~rv~a~a~~e~K~~ii~eLkk-~~~k~vm 98 (152)
T COG4087 71 ---------------------------------------------------ERVFAGADPEMKAKIIRELKK-RYEKVVM 98 (152)
T ss_pred ---------------------------------------------------eeeecccCHHHHHHHHHHhcC-CCcEEEE
Confidence 117888999999999999998 7899999
Q ss_pred EcCCcccHHHHHhCCccEEecCCch--hHHHHhCceeccccc
Q 002391 867 IGDGANDVGMIQEADIGIGISGVEG--MQIVLSGHDMRKCIQ 906 (928)
Q Consensus 867 iGDG~ND~~mL~~AdvGIa~~g~e~--~~a~~aaD~v~~~~~ 906 (928)
+|||+||.+||+.||+||..-++|+ ..+.++||++...+.
T Consensus 99 VGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~ 140 (152)
T COG4087 99 VGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIA 140 (152)
T ss_pred ecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHH
Confidence 9999999999999999996544443 335689999987543
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=4e-10 Score=121.96 Aligned_cols=63 Identities=24% Similarity=0.340 Sum_probs=52.4
Q ss_pred EEEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccc
Q 002391 841 CCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKC 904 (928)
Q Consensus 841 ~~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~ 904 (928)
+...+|. .|+..++.+.++.| ..|++||||.||++||+.|++||||+++... +|.+||+|+.-
T Consensus 187 ~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~~A~~vt~~ 254 (270)
T PRK10513 187 FLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPS-VKEVAQFVTKS 254 (270)
T ss_pred eEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHH-HHHhcCeeccC
Confidence 4456664 69999999876644 5799999999999999999999999776554 99999999863
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=3e-10 Score=122.94 Aligned_cols=181 Identities=17% Similarity=0.166 Sum_probs=101.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc----ccCceEEE--------EeCCCcchHHHHHHHHHHh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL----RQGMKQIC--------ITALNSDSVGKAAKEAVKD 785 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii----~~~~~~i~--------~~~~~~~~~~~~~~~~~~~ 785 (928)
.+.+.+.++|++|++.|++++++|||+...+..+.+++++. ..++..+. ....+.+.....+......
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 48899999999999999999999999999999999998863 22333222 2222233333333221111
Q ss_pred hHH---------------HHHHHhhh----hhhc---cCCC-cCcEEEEEcCc--hhhHhhhHHHHHHHHh-hhhccCee
Q 002391 786 NIL---------------MQITNASQ----MIKL---ERDP-HAAYALIIEGK--TLAYALEDDMKHHFLG-LAVECASV 839 (928)
Q Consensus 786 ~~~---------------~~~~~~~~----~~~~---~~~~-~~~~~lvi~G~--~l~~~~~~~~~~~~~~-~~~~~~~~ 839 (928)
+.. ........ .... .... ....-+.+-+. .+.. +...+...+.. +.......
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~-~~~~l~~~~~~~~~~~~s~~ 177 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTR-LQIQLNEALGERAHLCFSAT 177 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHH-HHHHHHHHhcCCEEEEEcCC
Confidence 000 00000000 0000 0000 00011111111 1110 11112222211 11111111
Q ss_pred EEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCce
Q 002391 840 ICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHD 900 (928)
Q Consensus 840 v~~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~ 900 (928)
-+...+|. .|+..++.+.++.| ..|++||||.||++||+.|+.||||+++... +|.+||+
T Consensus 178 ~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~-vK~~A~~ 242 (272)
T PRK15126 178 DCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQ-LRAELPH 242 (272)
T ss_pred cEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHH-HHHhCCC
Confidence 24566676 59999999977644 5799999999999999999999999776544 9999997
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.8e-10 Score=120.87 Aligned_cols=194 Identities=15% Similarity=0.222 Sum_probs=104.7
Q ss_pred eeeeeccc-CCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccc----cCceEEEEe-------CCCcchHHHH
Q 002391 711 GATAVEDK-LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR----QGMKQICIT-------ALNSDSVGKA 778 (928)
Q Consensus 711 G~~~i~D~-lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~----~~~~~i~~~-------~~~~~~~~~~ 778 (928)
|.+.-.+. +.+.+.++|+++++.|++++++|||+...+..+..++++-. .++..+... ..+.+.....
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 33333444 88999999999999999999999999999999999998743 233333222 2222222222
Q ss_pred HHHHHHh-hHHHHHHHhhhhhhcc-C--C------------------CcCc-EEEEEc--CchhhHhhhHHHHHHHHhhh
Q 002391 779 AKEAVKD-NILMQITNASQMIKLE-R--D------------------PHAA-YALIIE--GKTLAYALEDDMKHHFLGLA 833 (928)
Q Consensus 779 ~~~~~~~-~~~~~~~~~~~~~~~~-~--~------------------~~~~-~~lvi~--G~~l~~~~~~~~~~~~~~~~ 833 (928)
.....+. .....+.......... . . .... ..+.+. ...+... ...+...+....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~ 170 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEEL-VEALRKRFPDLG 170 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHH-HHHHhhhccccc
Confidence 2211110 0000000000000000 0 0 0000 000000 1111110 011111111111
Q ss_pred hc-c-CeeEEEEcChh--hHHHHHHHHhhcCCC---EEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 834 VE-C-ASVICCRVSPK--QKALVTRLVKEGTGK---TTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 834 ~~-~-~~~v~~r~~P~--qK~~iV~~l~~~~g~---~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
.. . ....+....|. .|+..++.+.++.|- .|+||||+.||++||+.|+.||||++. ...++..||+++.-.+
T Consensus 171 ~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A~~vt~~n~ 249 (264)
T COG0561 171 LTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVTTSND 249 (264)
T ss_pred eEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhCCcccCCcc
Confidence 00 0 11111444454 699999988776553 599999999999999999999999877 4449999998876544
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.04 E-value=6.3e-10 Score=118.73 Aligned_cols=186 Identities=18% Similarity=0.229 Sum_probs=109.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc------------ccCceEEEEeCCCcchHHHHHHHHHHh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL------------RQGMKQICITALNSDSVGKAAKEAVKD 785 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii------------~~~~~~i~~~~~~~~~~~~~~~~~~~~ 785 (928)
++.+.+.++|++|+++|++++++|||.+..+..+..++++- ....+.+.....+.+.....+......
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 94 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKEH 94 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHHT
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhhc
Confidence 47789999999999999999999999999999999988764 233334444444444444444433332
Q ss_pred hHHHHHHHhhhhhh---------------------------ccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhh-hccC
Q 002391 786 NILMQITNASQMIK---------------------------LERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA-VECA 837 (928)
Q Consensus 786 ~~~~~~~~~~~~~~---------------------------~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~-~~~~ 837 (928)
.+...+......+. .......+.. ......-...+.+++...+.... ....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 95 NISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKIL-FFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEE-EESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred ccccccccceeeecccccccchhhhhhcccccccccccccccccccceeee-ccccchhhhhhhhhhccccCcceeEEEe
Confidence 11000000000000 0000011111 11111111122233444443321 1111
Q ss_pred eeEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceecccc
Q 002391 838 SVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCI 905 (928)
Q Consensus 838 ~~v~~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~ 905 (928)
..-+..++|. .|+..++.+.++.| +.+++|||+.||.+||+.|+.||+|+++... ++.+||+++.-.
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~~ 245 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPSN 245 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESSG
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecCC
Confidence 1223345553 69999998876533 6899999999999999999999999776654 999999997743
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.3e-09 Score=114.53 Aligned_cols=184 Identities=15% Similarity=0.169 Sum_probs=98.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc----ccCceEEEEeCCCcchHHHHHHH-HHHhhHHHHHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL----RQGMKQICITALNSDSVGKAAKE-AVKDNILMQIT 792 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii----~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 792 (928)
.+.+.+.++|++|+++||+++++|||+...+..+++.+|+. ..++..+.............+.. ..........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~- 93 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKT- 93 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhcc-
Confidence 47788999999999999999999999999999999998842 22222222221100000000000 0000000000
Q ss_pred HhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChh--hHHHHHHHHhhcCC---CEEEEE
Q 002391 793 NASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK--QKALVTRLVKEGTG---KTTLAI 867 (928)
Q Consensus 793 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~--qK~~iV~~l~~~~g---~~vlai 867 (928)
..................+......+.. ..+...+......+....+....|. .|...++.+.+..+ ..+++|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~ 171 (225)
T TIGR01482 94 FPFSRLKVQYPRRASLVKMRYGIDVDTV--REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVC 171 (225)
T ss_pred cchhhhccccccccceEEEeecCCHHHH--HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEE
Confidence 0000000000000111111111111111 1111221110001111234455553 68888888866433 579999
Q ss_pred cCCcccHHHHHhCCccEEecCCchhHHHHhCceecccc
Q 002391 868 GDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCI 905 (928)
Q Consensus 868 GDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~ 905 (928)
||+.||++|++.|++||+|++.... +|..||+|+.-.
T Consensus 172 GD~~NDi~m~~~ag~~vam~Na~~~-~k~~A~~vt~~~ 208 (225)
T TIGR01482 172 GDSENDIDLFEVPGFGVAVANAQPE-LKEWADYVTESP 208 (225)
T ss_pred CCCHhhHHHHHhcCceEEcCChhHH-HHHhcCeecCCC
Confidence 9999999999999999999776544 999999998743
|
catalyze the same reaction as SPP. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.8e-09 Score=113.93 Aligned_cols=182 Identities=13% Similarity=0.121 Sum_probs=100.9
Q ss_pred ccc-CCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc----ccCceEEEEeCCCcchHHHHHHHHHHhhHHHH
Q 002391 716 EDK-LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL----RQGMKQICITALNSDSVGKAAKEAVKDNILMQ 790 (928)
Q Consensus 716 ~D~-lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (928)
.|+ +.+.+.++|++|++.|++++++|||+...+..+++.+++- ..++..+.............+.. . ..+...
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~-~-~~~~~~ 94 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEE-C-EKAYSE 94 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHH-H-HHHHHH
Confidence 344 7789999999999999999999999999999999888863 23333333221111100000000 0 000000
Q ss_pred HHHhh----hhhhccCCCcCcEEEE-EcCchhhHhhhHHHHHHHHhhh---hccCeeEEEEcChhh--HHHHHHHHhhcC
Q 002391 791 ITNAS----QMIKLERDPHAAYALI-IEGKTLAYALEDDMKHHFLGLA---VECASVICCRVSPKQ--KALVTRLVKEGT 860 (928)
Q Consensus 791 ~~~~~----~~~~~~~~~~~~~~lv-i~G~~l~~~~~~~~~~~~~~~~---~~~~~~v~~r~~P~q--K~~iV~~l~~~~ 860 (928)
+.... ..+...........+. ....... .....+.... .......+....|.. |+..++.+.++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~ 169 (230)
T PRK01158 95 LKKRFPEASTSLTKLDPDYRKTEVALRRTVPVE-----EVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELM 169 (230)
T ss_pred HHHhccccceeeecCCcccccceeeecccccHH-----HHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHh
Confidence 10000 0000000000000111 1111111 1111111111 011111234566654 988888887653
Q ss_pred C---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceecccc
Q 002391 861 G---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCI 905 (928)
Q Consensus 861 g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~ 905 (928)
+ ..+++|||+.||++|++.|++||+|++.... +|.+||+++.-.
T Consensus 170 ~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~-vk~~a~~v~~~n 216 (230)
T PRK01158 170 GIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEE-LKEAADYVTEKS 216 (230)
T ss_pred CCCHHHEEEECCchhhHHHHHhcCceEEecCccHH-HHHhcceEecCC
Confidence 3 5699999999999999999999999776554 999999998743
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.02 E-value=7e-10 Score=129.57 Aligned_cols=63 Identities=24% Similarity=0.364 Sum_probs=52.4
Q ss_pred EEEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccc
Q 002391 841 CCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKC 904 (928)
Q Consensus 841 ~~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~ 904 (928)
+..+.|. .|+..++.+.++.| ..|++||||.||++||+.|++||||+++... +|.+||+|+.-
T Consensus 498 ~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~ee-VK~~Ad~VT~s 565 (580)
T PLN02887 498 MLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEK-TKAVADVIGVS 565 (580)
T ss_pred EEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHH-HHHhCCEEeCC
Confidence 3455554 69999999977644 5799999999999999999999999776554 99999999863
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.2e-10 Score=119.20 Aligned_cols=62 Identities=24% Similarity=0.281 Sum_probs=51.2
Q ss_pred EEEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCc--eecc
Q 002391 841 CCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGH--DMRK 903 (928)
Q Consensus 841 ~~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD--~v~~ 903 (928)
+....|. .|+..++.+.++.| ..|++||||.||++||+.|+.||||+++... +|.+|| +++.
T Consensus 181 ~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~~A~~~~v~~ 249 (266)
T PRK10976 181 CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQR-LKDLLPELEVIG 249 (266)
T ss_pred eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHH-HHHhCCCCeecc
Confidence 4566665 59999999876644 5799999999999999999999999776554 999988 6765
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.9e-09 Score=108.14 Aligned_cols=177 Identities=15% Similarity=0.205 Sum_probs=99.1
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc----ccCceEEEEeCCCcchHHHHHHHHH-HhhHHHHHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL----RQGMKQICITALNSDSVGKAAKEAV-KDNILMQIT 792 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii----~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 792 (928)
++.+++.++|++|++.|++++++|||++..+..+++.+++- ..++..+........ ......... ........
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~-~~~~~~~~~~~~~~~~~~- 95 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIF-LANMEEEWFLDEEKKKRF- 95 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEE-EecccchhhHHHhhhhhh-
Confidence 48889999999999999999999999999999999988763 223333333211100 000000000 00000000
Q ss_pred HhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcCh--hhHHHHHHHHhhcCC---CEEEEE
Q 002391 793 NASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEGTG---KTTLAI 867 (928)
Q Consensus 793 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P--~qK~~iV~~l~~~~g---~~vlai 867 (928)
....... ........+..++.....+ ...+.. ..+.... ...+..++| ..|+..++.+.+..+ ..+++|
T Consensus 96 -~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~l~~--~~~~~~~-~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~i 169 (215)
T TIGR01487 96 -PRDRLSN-EYPRASLVIMREGKDVDEV-REIIKE--RGLNLVD-SGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAI 169 (215)
T ss_pred -hhhhccc-ccceeEEEEecCCccHHHH-HHHHHh--CCeEEEe-cCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 0000000 0001111222233322211 111111 0111110 112334444 479999998876533 469999
Q ss_pred cCCcccHHHHHhCCccEEecCCchhHHHHhCceecc
Q 002391 868 GDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRK 903 (928)
Q Consensus 868 GDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~ 903 (928)
||+.||.+|++.|++||+|++.... ++..||+++.
T Consensus 170 GDs~ND~~ml~~ag~~vam~na~~~-~k~~A~~v~~ 204 (215)
T TIGR01487 170 GDSENDIDLFRVVGFKVAVANADDQ-LKEIADYVTS 204 (215)
T ss_pred CCCHHHHHHHHhCCCeEEcCCccHH-HHHhCCEEcC
Confidence 9999999999999999999776544 9999999986
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.9e-08 Score=108.82 Aligned_cols=184 Identities=13% Similarity=0.118 Sum_probs=99.9
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc-----ccCceEEEEeC--------------CCcchHHHHH
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL-----RQGMKQICITA--------------LNSDSVGKAA 779 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii-----~~~~~~i~~~~--------------~~~~~~~~~~ 779 (928)
+-+.+.++|++|+++|++++++|||....+..+++++|+- ..++..++... .+.+.....+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 4567899999999999999999999999999999999862 23444343221 1122222222
Q ss_pred HHHHHh-hHH---------HHHHHhhh----hhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHh--hhhccCeeEEEE
Q 002391 780 KEAVKD-NIL---------MQITNASQ----MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLG--LAVECASVICCR 843 (928)
Q Consensus 780 ~~~~~~-~~~---------~~~~~~~~----~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~--~~~~~~~~v~~r 843 (928)
....+. .+. ........ .............+.+.+..- .+ .++...+.. +.... ...+..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~-~~~~iE 180 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDE--RM-AQFTARLAELGLQFVQ-GARFWH 180 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHH--HH-HHHHHHHHHCCCEEEe-cCeeEE
Confidence 221111 100 00000000 000000000111122222110 00 112222221 11111 112446
Q ss_pred cChh--hHHHHHHHHhhcCC------CEEEEEcCCcccHHHHHhCCccEEecCCc-h-hH---HHHhCceeccccc
Q 002391 844 VSPK--QKALVTRLVKEGTG------KTTLAIGDGANDVGMIQEADIGIGISGVE-G-MQ---IVLSGHDMRKCIQ 906 (928)
Q Consensus 844 ~~P~--qK~~iV~~l~~~~g------~~vlaiGDG~ND~~mL~~AdvGIa~~g~e-~-~~---a~~aaD~v~~~~~ 906 (928)
++|. .|+..++.+.++.| ..|++||||.||++||+.|++||||++.. . .+ .+..+||++.-+.
T Consensus 181 i~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~ 256 (271)
T PRK03669 181 VLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREG 256 (271)
T ss_pred EecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCC
Confidence 6664 69998888876533 57999999999999999999999997433 1 11 2347888888655
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.1e-08 Score=110.70 Aligned_cols=56 Identities=21% Similarity=0.313 Sum_probs=46.7
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccc
Q 002391 848 QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKC 904 (928)
Q Consensus 848 qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~ 904 (928)
.|+..++.+.++.| ..+++|||+.||++|++.|++||+|++.. .+++.+||+++.-
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~-~~lk~~Ad~v~~~ 257 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNAD-DAVKARADLVIGD 257 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCch-HHHHHhCCEEEec
Confidence 58888887765544 57999999999999999999999997654 4589999999864
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1e-07 Score=98.16 Aligned_cols=112 Identities=22% Similarity=0.264 Sum_probs=83.7
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhh
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
.++.+++.+.++.++++|.+|+++||-...-+..+|+.+|+...-...+.... .
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-G------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-C-------------------------
Confidence 68999999999999999999999999999999999999999543322222111 0
Q ss_pred hhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCC---CEEEEEcCCccc
Q 002391 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG---KTTLAIGDGAND 873 (928)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g---~~vlaiGDG~ND 873 (928)
..+|. ++.-.+..+.|...++.+.+..| +.+.|+|||.||
T Consensus 130 --------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nD 172 (212)
T COG0560 130 --------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVAYGDSAND 172 (212)
T ss_pred --------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhh
Confidence 12221 12223445778888866654344 469999999999
Q ss_pred HHHHHhCCccEEecCCch
Q 002391 874 VGMIQEADIGIGISGVEG 891 (928)
Q Consensus 874 ~~mL~~AdvGIa~~g~e~ 891 (928)
.|||+.||.+|++.....
T Consensus 173 lpml~~ag~~ia~n~~~~ 190 (212)
T COG0560 173 LPMLEAAGLPIAVNPKPK 190 (212)
T ss_pred HHHHHhCCCCeEeCcCHH
Confidence 999999999999966544
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.3e-08 Score=105.07 Aligned_cols=182 Identities=10% Similarity=0.140 Sum_probs=98.0
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc----cccCceEEEEeC--------------CCcchHHHHHH
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL----LRQGMKQICITA--------------LNSDSVGKAAK 780 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi----i~~~~~~i~~~~--------------~~~~~~~~~~~ 780 (928)
.-+.+.++|++|+++|++++++|||....+..+.+++|+ +..++..++... .+.+.....+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 445689999999999999999999999999999999986 334444443321 11122222222
Q ss_pred HHHHh-hHHHHHHHh------h-------hhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHh--hhhccCeeEEEEc
Q 002391 781 EAVKD-NILMQITNA------S-------QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLG--LAVECASVICCRV 844 (928)
Q Consensus 781 ~~~~~-~~~~~~~~~------~-------~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~--~~~~~~~~v~~r~ 844 (928)
..... +........ . ..............++. ...... .+...+.. +..... ..+..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~s-~~~~ei 170 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW-SEERRE----RFTEALVELGLEVTHG-NRFYHV 170 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-ChHHHH----HHHHHHHHcCCEEEeC-CceEEE
Confidence 11110 000000000 0 00000000011111122 211111 11111111 111111 123344
Q ss_pred Chh--hHHHHHHHHhhcC-----CCEEEEEcCCcccHHHHHhCCccEEecCCch--hHHHHh---Cceeccccc
Q 002391 845 SPK--QKALVTRLVKEGT-----GKTTLAIGDGANDVGMIQEADIGIGISGVEG--MQIVLS---GHDMRKCIQ 906 (928)
Q Consensus 845 ~P~--qK~~iV~~l~~~~-----g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~--~~a~~a---aD~v~~~~~ 906 (928)
.|. .|+..++.+.++. ...+++|||+.||.+|++.|++||+|++... .++|.. +++++.-..
T Consensus 171 ~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~ 244 (256)
T TIGR01486 171 LGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPG 244 (256)
T ss_pred ecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCC
Confidence 443 5888888776552 4579999999999999999999999988652 237775 458886433
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.3e-08 Score=107.25 Aligned_cols=184 Identities=16% Similarity=0.203 Sum_probs=101.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc----ccCceEEE--------EeCCCcchHHHHHHHHHHh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL----RQGMKQIC--------ITALNSDSVGKAAKEAVKD 785 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii----~~~~~~i~--------~~~~~~~~~~~~~~~~~~~ 785 (928)
++.+++.++|++|+++|++++++|||+...+..+..++++- ..++..++ ....+.+.....+....+.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 47889999999999999999999999999999999888753 22333332 2222233333333322221
Q ss_pred hHHHHHHHhhhhhhccC-------------C------------CcCcEEEEEcCchhhHhhhHHHHHHHHh------hhh
Q 002391 786 NILMQITNASQMIKLER-------------D------------PHAAYALIIEGKTLAYALEDDMKHHFLG------LAV 834 (928)
Q Consensus 786 ~~~~~~~~~~~~~~~~~-------------~------------~~~~~~lvi~G~~l~~~~~~~~~~~~~~------~~~ 834 (928)
.+...+......+.... . ......+.+.+..-. .+++...+.. +..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 172 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPED---LDLLIEALNKLELEENVSV 172 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHH---HHHHHHHhhhhhhcCCEEE
Confidence 11000000000000000 0 000000111111000 0111111211 100
Q ss_pred ccCeeEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceecccc
Q 002391 835 ECASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCI 905 (928)
Q Consensus 835 ~~~~~v~~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~ 905 (928)
.....-+....|. .|+..++.+.+..+ ..+++|||+.||++|++.|++|++|++... .++..||+++.-.
T Consensus 173 ~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~-~~k~~a~~~~~~n 247 (256)
T TIGR00099 173 VSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADE-ELKALADYVTDSN 247 (256)
T ss_pred EEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchH-HHHHhCCEEecCC
Confidence 0111123455665 59999999876543 579999999999999999999999976543 4899999998643
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.3e-08 Score=99.23 Aligned_cols=117 Identities=18% Similarity=0.125 Sum_probs=88.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.|++.+.|+.|++.| ++.++||-....+..+++.+|+...-...+..+...
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57999999999999975 999999999999999999999842110001000000
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL 877 (928)
.++|. .. ..+..|..+++.+++ .+..++++|||.||++|+
T Consensus 121 -------------~~tG~------------------------~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs~nDl~ml 160 (203)
T TIGR02137 121 -------------RVVGY------------------------QL--RQKDPKRQSVIAFKS-LYYRVIAAGDSYNDTTML 160 (203)
T ss_pred -------------eeECe------------------------ee--cCcchHHHHHHHHHh-hCCCEEEEeCCHHHHHHH
Confidence 11121 11 346789999999976 677899999999999999
Q ss_pred HhCCccEEecCCchhHHHHhCceecc
Q 002391 878 QEADIGIGISGVEGMQIVLSGHDMRK 903 (928)
Q Consensus 878 ~~AdvGIa~~g~e~~~a~~aaD~v~~ 903 (928)
+.||+||++..++. ++.+||-...
T Consensus 161 ~~Ag~~ia~~ak~~--~~~~~~~~~~ 184 (203)
T TIGR02137 161 SEAHAGILFHAPEN--VIREFPQFPA 184 (203)
T ss_pred HhCCCCEEecCCHH--HHHhCCCCCc
Confidence 99999999988887 7777776644
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.5e-08 Score=105.93 Aligned_cols=124 Identities=23% Similarity=0.215 Sum_probs=88.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.|++.+.|+.|++.|+++.++||.....+..+...+|+...-...+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 57899999999999999999999999988888888888873211111110000
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCC---CEEEEEcCCcccH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG---KTTLAIGDGANDV 874 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g---~~vlaiGDG~ND~ 874 (928)
.++|.... .-+..+.|...++.+.+..| ..|+|||||.||+
T Consensus 234 -------------~ltg~v~g-----------------------~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl 277 (322)
T PRK11133 234 -------------KLTGNVLG-----------------------DIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDL 277 (322)
T ss_pred -------------EEEeEecC-----------------------ccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHH
Confidence 01111000 00234678888888765433 6799999999999
Q ss_pred HHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 875 GMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 875 ~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+|++.||+||++...+. ++..||+++....
T Consensus 278 ~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~~~~ 307 (322)
T PRK11133 278 PMIKAAGLGIAYHAKPK--VNEQAQVTIRHAD 307 (322)
T ss_pred HHHHHCCCeEEeCCCHH--HHhhCCEEecCcC
Confidence 99999999999944443 8999999987554
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.57 E-value=5.6e-07 Score=97.41 Aligned_cols=42 Identities=10% Similarity=0.039 Sum_probs=37.9
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
..+.+++.++|+.|++.|++++++||+....+..+++++|+.
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 346678999999999999999999999999999999999864
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.53 E-value=5.7e-07 Score=95.17 Aligned_cols=62 Identities=23% Similarity=0.281 Sum_probs=50.3
Q ss_pred EcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCc----eecccc
Q 002391 843 RVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGH----DMRKCI 905 (928)
Q Consensus 843 r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD----~v~~~~ 905 (928)
...|. .|...++.+.++.+ ..+++|||+.||.+|++.|++||+|++.... ++..|| +++..+
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~~~~~~v~~~~ 222 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRHQQRIYFANNP 222 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhcCCcEEEcCCC
Confidence 45554 69999998876544 3689999999999999999999999776655 999999 776643
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.51 E-value=6.9e-07 Score=93.43 Aligned_cols=42 Identities=7% Similarity=0.050 Sum_probs=37.8
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
.+..-+++.++|++|+++|++++++|||....+..+..++|+
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~ 54 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGV 54 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 355566899999999999999999999999999999999986
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.47 E-value=6.7e-07 Score=87.69 Aligned_cols=98 Identities=11% Similarity=0.168 Sum_probs=74.9
Q ss_pred HHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCc
Q 002391 726 CIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPH 805 (928)
Q Consensus 726 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (928)
+|+.|++.|+++.|+||++...+..+.+..|+-..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------------------
Confidence 99999999999999999999999999999887310
Q ss_pred CcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCCcccHHHHHhCCc
Q 002391 806 AAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEADI 882 (928)
Q Consensus 806 ~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~---~g~~vlaiGDG~ND~~mL~~Adv 882 (928)
+.. ...|...+..+.+. ....++++||+.||++|++.|++
T Consensus 71 -----------------------------------~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~ 113 (154)
T TIGR01670 71 -----------------------------------YQG--QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGL 113 (154)
T ss_pred -----------------------------------Eec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence 000 02233333333222 33579999999999999999999
Q ss_pred cEEecCCchhHHHHhCceeccccc
Q 002391 883 GIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 883 GIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
++++.+.... ++..+|+++..+.
T Consensus 114 ~~~v~~~~~~-~~~~a~~i~~~~~ 136 (154)
T TIGR01670 114 SVAVADAHPL-LIPRADYVTRIAG 136 (154)
T ss_pred eEecCCcCHH-HHHhCCEEecCCC
Confidence 9999766543 8888999998665
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.46 E-value=2e-06 Score=91.78 Aligned_cols=179 Identities=12% Similarity=0.133 Sum_probs=95.6
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccccc------CceEEEEeCCCc-chH-HHHHHHHHHhhHH
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQ------GMKQICITALNS-DSV-GKAAKEAVKDNIL 788 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~------~~~~i~~~~~~~-~~~-~~~~~~~~~~~~~ 788 (928)
.++.+.+.++|+++++.|++++++|||....+..+..+.++..+ ++..++..+... +.. ...+.........
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 45678899999999999999999999999999999988886544 333333322111 111 0111101010101
Q ss_pred HHHHHhhhhhhccC---CCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeE----EEEcCh--hhHHHHHHHHhhc
Q 002391 789 MQITNASQMIKLER---DPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVI----CCRVSP--KQKALVTRLVKEG 859 (928)
Q Consensus 789 ~~~~~~~~~~~~~~---~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v----~~r~~P--~qK~~iV~~l~~~ 859 (928)
..+........... ....+..+..........+ ..+...+......+..++ +....| ..|...++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVI-KQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHH-HHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 11111001111000 0112222322222211111 112222222111121111 224555 3699899988765
Q ss_pred C---CCEEEEEcCCcccHHHHHh-CCccEEecCCchhHHHHh
Q 002391 860 T---GKTTLAIGDGANDVGMIQE-ADIGIGISGVEGMQIVLS 897 (928)
Q Consensus 860 ~---g~~vlaiGDG~ND~~mL~~-AdvGIa~~g~e~~~a~~a 897 (928)
. ...|+++||+.||++|++. ++.||+|++.... ++..
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~-~k~~ 219 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEE-LLQW 219 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHH-HHHH
Confidence 3 3679999999999999998 6799999776543 5543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.44 E-value=6.8e-07 Score=88.37 Aligned_cols=100 Identities=10% Similarity=0.125 Sum_probs=75.4
Q ss_pred HHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCC
Q 002391 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (928)
Q Consensus 725 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (928)
.+|+.|+++|+++.|+|+.+...+..+...+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 68999999999999999999999999999999831
Q ss_pred cCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcC--hhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCc
Q 002391 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVS--PKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADI 882 (928)
Q Consensus 805 ~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~--P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~Adv 882 (928)
.|.... |+--..+++.+.- ....+++|||+.||++|++.|++
T Consensus 76 -----------------------------------~f~~~kpkp~~~~~~~~~l~~-~~~ev~~iGD~~nDi~~~~~ag~ 119 (169)
T TIGR02726 76 -----------------------------------FHEGIKKKTEPYAQMLEEMNI-SDAEVCYVGDDLVDLSMMKRVGL 119 (169)
T ss_pred -----------------------------------EEecCCCCHHHHHHHHHHcCc-CHHHEEEECCCHHHHHHHHHCCC
Confidence 010111 2222233333322 33579999999999999999999
Q ss_pred cEEecCCchhHHHHhCceeccccc
Q 002391 883 GIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 883 GIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+++|++.... ++.+|++++....
T Consensus 120 ~~am~nA~~~-lk~~A~~I~~~~~ 142 (169)
T TIGR02726 120 AVAVGDAVAD-VKEAAAYVTTARG 142 (169)
T ss_pred eEECcCchHH-HHHhCCEEcCCCC
Confidence 9999776544 9999999986433
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.8e-06 Score=90.32 Aligned_cols=123 Identities=21% Similarity=0.251 Sum_probs=85.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.+++++.|+.|++.|+++.++||.....+..+.+.+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58999999999999999999999999999999999998884311111110000
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEE-cChhhHHHHHHHHhhcCC---CEEEEEcCCccc
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGTG---KTTLAIGDGAND 873 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r-~~P~qK~~iV~~l~~~~g---~~vlaiGDG~ND 873 (928)
.++|. +.++ ..+..|..+++.+.+..+ ..+++|||+.+|
T Consensus 138 -------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D 180 (219)
T TIGR00338 138 -------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGAND 180 (219)
T ss_pred -------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHH
Confidence 00000 1111 112336666665543322 468999999999
Q ss_pred HHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 874 VGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 874 ~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+.|++.||++|++.+.+. +..+||++...++
T Consensus 181 i~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~ 211 (219)
T TIGR00338 181 LSMIKAAGLGIAFNAKPK--LQQKADICINKKD 211 (219)
T ss_pred HHHHHhCCCeEEeCCCHH--HHHhchhccCCCC
Confidence 999999999999977654 7789999977655
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.34 E-value=5.5e-06 Score=86.70 Aligned_cols=38 Identities=16% Similarity=0.213 Sum_probs=34.9
Q ss_pred CChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 721 KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 721 ~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
+.+.++|+.|+++||+++++|||+...+..+.+.+++.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 34889999999999999999999999999999999863
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.8e-06 Score=91.80 Aligned_cols=59 Identities=25% Similarity=0.334 Sum_probs=45.5
Q ss_pred EEEcChh--hHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHhC-CccEEecCCchhHHHHhCcee
Q 002391 841 CCRVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEA-DIGIGISGVEGMQIVLSGHDM 901 (928)
Q Consensus 841 ~~r~~P~--qK~~iV~~l~~~~g~~vlaiGD----G~ND~~mL~~A-dvGIa~~g~e~~~a~~aaD~v 901 (928)
+..+.|. .|+..++.+.+. ...|++||| |.||++||+.| -.|+++++.+.. ++..+..+
T Consensus 179 ~leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~-~~~~~~~~ 244 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDT-IKILKELF 244 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHH-HHHHHHHh
Confidence 3455554 699999999874 688999999 99999999977 577887776664 66665544
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=6.2e-06 Score=96.37 Aligned_cols=39 Identities=8% Similarity=-0.030 Sum_probs=35.3
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
.-+.+.++|+.|+++||+++++|||....+..+++++++
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 345788999999999999999999999999999999885
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.28 E-value=8.9e-06 Score=92.58 Aligned_cols=173 Identities=14% Similarity=0.123 Sum_probs=93.1
Q ss_pred hHHHH-HHHHHcCCcEEEEcCCchhhHHHHHHHccccccC------ceEEEEeCC-Ccch-HHHHHHHHHHhhHHHHHHH
Q 002391 723 VPQCI-DKLAQAGLKIWVLTGDKMETAINIGFACSLLRQG------MKQICITAL-NSDS-VGKAAKEAVKDNILMQITN 793 (928)
Q Consensus 723 ~~~~I-~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~------~~~i~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 793 (928)
...++ +++++.|+.++++|||.+..+..+.++.++..++ +..+..... ..+. ....+..............
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 44555 8889999999999999999999999999877663 233333221 1111 1111111111111111100
Q ss_pred hhhhhhc-cCC--CcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccC----eeEEEEcChh--hHHHHHHHHhhcC---C
Q 002391 794 ASQMIKL-ERD--PHAAYALIIEGKTLAYALEDDMKHHFLGLAVECA----SVICCRVSPK--QKALVTRLVKEGT---G 861 (928)
Q Consensus 794 ~~~~~~~-~~~--~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~----~~v~~r~~P~--qK~~iV~~l~~~~---g 861 (928)
....... ... ...+..+..+...+... .+.+...+......+. .-.+..+.|. .|+..++.+.++. |
T Consensus 113 ~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g 191 (413)
T PLN02382 113 KFPELKLQPETEQRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG 191 (413)
T ss_pred cCCCcccCCcccCCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC
Confidence 0000000 000 11122333332222221 1223333322111111 1134566665 5999999887653 3
Q ss_pred ---CEEEEEcCCcccHHHHHhCC-ccEEecCCchhHHHHh
Q 002391 862 ---KTTLAIGDGANDVGMIQEAD-IGIGISGVEGMQIVLS 897 (928)
Q Consensus 862 ---~~vlaiGDG~ND~~mL~~Ad-vGIa~~g~e~~~a~~a 897 (928)
..|++|||+.||++||+.|+ .||+|++.... ++..
T Consensus 192 i~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~~ 230 (413)
T PLN02382 192 KAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQW 230 (413)
T ss_pred CChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHHH
Confidence 57999999999999999999 69999776554 6653
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.7e-06 Score=84.27 Aligned_cols=96 Identities=13% Similarity=0.172 Sum_probs=72.5
Q ss_pred HHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCC
Q 002391 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (928)
Q Consensus 725 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (928)
.+|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 69999999999999999999999999999998731
Q ss_pred cCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCC
Q 002391 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEAD 881 (928)
Q Consensus 805 ~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~---g~~vlaiGDG~ND~~mL~~Ad 881 (928)
+|. ..+.|...++.+.+.. ...+++|||+.||++|++.|+
T Consensus 90 -----------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG 132 (183)
T PRK09484 90 -----------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVG 132 (183)
T ss_pred -----------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCC
Confidence 000 1123434444433222 357999999999999999999
Q ss_pred ccEEecCCchhHHHHhCceecc
Q 002391 882 IGIGISGVEGMQIVLSGHDMRK 903 (928)
Q Consensus 882 vGIa~~g~e~~~a~~aaD~v~~ 903 (928)
++++++..+. .++..+|+++.
T Consensus 133 ~~~~v~~~~~-~~~~~a~~v~~ 153 (183)
T PRK09484 133 LSVAVADAHP-LLLPRADYVTR 153 (183)
T ss_pred CeEecCChhH-HHHHhCCEEec
Confidence 9999865443 36788999985
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.6e-06 Score=81.33 Aligned_cols=111 Identities=22% Similarity=0.355 Sum_probs=77.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCc--eEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGM--KQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (928)
.+-+|+++..+.|++.|.+|.++||--...+..+|.++||-..+- ..+..+.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~-------------------------- 141 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDK-------------------------- 141 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeecc--------------------------
Confidence 467999999999999999999999999999999999999954211 0010000
Q ss_pred hhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc-CCCEEEEEcCCcccH
Q 002391 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG-TGKTTLAIGDGANDV 874 (928)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~-~g~~vlaiGDG~ND~ 874 (928)
+|+-+.. .. --.-+....|+++++.+++. ..+.++|||||+||.
T Consensus 142 -----------------~Gk~~gf----------d~--------~~ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDl 186 (227)
T KOG1615|consen 142 -----------------DGKYLGF----------DT--------NEPTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDL 186 (227)
T ss_pred -----------------CCccccc----------cc--------CCccccCCccHHHHHHHHhCCChheeEEecCCcccc
Confidence 1100000 00 00002234799999999874 336899999999999
Q ss_pred HHHHhCCccEEecCC
Q 002391 875 GMIQEADIGIGISGV 889 (928)
Q Consensus 875 ~mL~~AdvGIa~~g~ 889 (928)
+|+..|+.=||..|.
T Consensus 187 ea~~pa~afi~~~g~ 201 (227)
T KOG1615|consen 187 EAMPPADAFIGFGGN 201 (227)
T ss_pred ccCCchhhhhccCCc
Confidence 999998877776654
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.19 E-value=8.6e-06 Score=83.73 Aligned_cols=118 Identities=21% Similarity=0.181 Sum_probs=79.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.+++.+.|+.|++.|+++.++||-....+..+++.+|+...-...+..+....
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~------------------------- 134 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGF------------------------- 134 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCe-------------------------
Confidence 5899999999999999999999999999999999999886321001111100000
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcC---CCEEEEEcCCcccH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT---GKTTLAIGDGANDV 874 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~---g~~vlaiGDG~ND~ 874 (928)
..+ ..+....|..|..+++.+.+.. ...+++|||+.||+
T Consensus 135 --------------~~p------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~ 176 (201)
T TIGR01491 135 --------------IQP------------------------DGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDL 176 (201)
T ss_pred --------------Eec------------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHH
Confidence 000 0111234566776666654432 35699999999999
Q ss_pred HHHHhCCccEEecCCchhHHHHhCc
Q 002391 875 GMIQEADIGIGISGVEGMQIVLSGH 899 (928)
Q Consensus 875 ~mL~~AdvGIa~~g~e~~~a~~aaD 899 (928)
+|++.||+++++.+... ....++|
T Consensus 177 ~~a~~ag~~~a~~~~~~-~~~~a~~ 200 (201)
T TIGR01491 177 PMFEVADISISLGDEGH-ADYLAKD 200 (201)
T ss_pred HHHHhcCCeEEECCCcc-chhhccc
Confidence 99999999999954332 2455554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.18 E-value=8.8e-06 Score=84.01 Aligned_cols=167 Identities=19% Similarity=0.229 Sum_probs=86.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcc--ccccCceEEEEeCCC-----cchHHHHHHHHHHhhHHHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACS--LLRQGMKQICITALN-----SDSVGKAAKEAVKDNILMQ 790 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~g--ii~~~~~~i~~~~~~-----~~~~~~~~~~~~~~~~~~~ 790 (928)
++.+.+.++|++|++.|++++++|||....+..+...++ ++..++..+...+.. .+.....+... ..+...
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 94 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIK--EEIGAE 94 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhh--hhcCce
Confidence 467889999999999999999999999999999887643 455555544432211 11111111110 000000
Q ss_pred HHHhhhhhhcc--CCCcCcEEEEEcCchhhHhhhHHHHHHHHhhh-------hccCeeEEEEcCh--hhHHHHHHHHhhc
Q 002391 791 ITNASQMIKLE--RDPHAAYALIIEGKTLAYALEDDMKHHFLGLA-------VECASVICCRVSP--KQKALVTRLVKEG 859 (928)
Q Consensus 791 ~~~~~~~~~~~--~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~-------~~~~~~v~~r~~P--~qK~~iV~~l~~~ 859 (928)
+......+... ........+...+..........+........ ..+...-+..+.| ..|...++.+.+.
T Consensus 95 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~ 174 (204)
T TIGR01484 95 LKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKE 174 (204)
T ss_pred eeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHH
Confidence 00000000000 00111111212111000111111222111111 0001112334555 4799999988664
Q ss_pred CC---CEEEEEcCCcccHHHHHhCCccEEe
Q 002391 860 TG---KTTLAIGDGANDVGMIQEADIGIGI 886 (928)
Q Consensus 860 ~g---~~vlaiGDG~ND~~mL~~AdvGIa~ 886 (928)
.+ ..++++||+.||.+|++.|++||+|
T Consensus 175 ~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 175 LNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred hCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 33 5699999999999999999999997
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.16 E-value=3e-05 Score=81.91 Aligned_cols=41 Identities=7% Similarity=-0.013 Sum_probs=37.4
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
+..-+.+.++|++|+++||.|+++||+.......+.+++++
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl 57 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRL 57 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 34567799999999999999999999999999999999987
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=2.3e-05 Score=84.22 Aligned_cols=181 Identities=10% Similarity=0.048 Sum_probs=92.4
Q ss_pred cCCCChHHHHHHHHH-cCCcEEEEcCCchhhHHHHHHHccc--cccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHh
Q 002391 718 KLQKGVPQCIDKLAQ-AGLKIWVLTGDKMETAINIGFACSL--LRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNA 794 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~-aGIkv~mlTGD~~~ta~~ia~~~gi--i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (928)
.+-+++.++|+.|++ .|++++++|||+...+..+...+++ +..++..+.... .. .....+.......+...+...
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~-~~-~~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDIN-GK-THIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCC-CC-eeeccCChhHHHHHHHHHHHH
Confidence 455789999999998 7999999999999999888876653 333332221111 00 000000000111111111111
Q ss_pred hhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhcc------CeeEEEEcChh--hHHHHHHHHhhcCC---CE
Q 002391 795 SQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVEC------ASVICCRVSPK--QKALVTRLVKEGTG---KT 863 (928)
Q Consensus 795 ~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~------~~~v~~r~~P~--qK~~iV~~l~~~~g---~~ 863 (928)
........-......++........ ..+.+......+...+ ...-+..+.|. .|+..++.+.+..+ ..
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~ 192 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRT 192 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCe
Confidence 1000000000111222222211110 0111111111111111 11233344554 79988888765543 67
Q ss_pred EEEEcCCcccHHHHHhC----CccEEecCCchhHHHHhCceeccccc
Q 002391 864 TLAIGDGANDVGMIQEA----DIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 864 vlaiGDG~ND~~mL~~A----dvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+++|||+.||.+|++.+ ++||+|++... .|++.+.-|.
T Consensus 193 v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~~-----~A~~~l~~~~ 234 (266)
T PRK10187 193 PVFVGDDLTDEAGFAVVNRLGGISVKVGTGAT-----QASWRLAGVP 234 (266)
T ss_pred EEEEcCCccHHHHHHHHHhcCCeEEEECCCCC-----cCeEeCCCHH
Confidence 99999999999999999 99999965543 4566655444
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.3e-05 Score=81.76 Aligned_cols=92 Identities=21% Similarity=0.291 Sum_probs=67.8
Q ss_pred CChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhc
Q 002391 721 KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKL 800 (928)
Q Consensus 721 ~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (928)
+++.+.|+.++++|++++|+||.....+.++++.+|+.... ++.....+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~----------------------------- 140 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFD----------------------------- 140 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEEC-----------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeee-----------------------------
Confidence 66669999999999999999999999999999999985321 11100000
Q ss_pred cCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChh-h--HHHHHHHH------hhcCCCEEEEEcCCc
Q 002391 801 ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK-Q--KALVTRLV------KEGTGKTTLAIGDGA 871 (928)
Q Consensus 801 ~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~-q--K~~iV~~l------~~~~g~~vlaiGDG~ 871 (928)
.+ ......+.+|. + |...++.+ +. ....++++|||.
T Consensus 141 ------------~~----------------------~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~-~~~~~~~iGDs~ 185 (192)
T PF12710_consen 141 ------------NG----------------------GGIFTGRITGSNCGGKAEALKELYIRDEEDI-DPDRVIAIGDSI 185 (192)
T ss_dssp ------------TT----------------------CCEEEEEEEEEEESHHHHHHHHHHHHHHHTH-TCCEEEEEESSG
T ss_pred ------------cc----------------------cceeeeeECCCCCCcHHHHHHHHHHHhhcCC-CCCeEEEEECCH
Confidence 00 02244555554 4 99999998 22 578999999999
Q ss_pred ccHHHHH
Q 002391 872 NDVGMIQ 878 (928)
Q Consensus 872 ND~~mL~ 878 (928)
||++|||
T Consensus 186 ~D~~~lr 192 (192)
T PF12710_consen 186 NDLPMLR 192 (192)
T ss_dssp GGHHHHH
T ss_pred HHHHHhC
Confidence 9999997
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=3.8e-05 Score=79.30 Aligned_cols=107 Identities=21% Similarity=0.202 Sum_probs=77.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.|++.+.++.|+++ +++.++||.....+..+...+|+...-...+......
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 4679999999999999 9999999999999999999998732110111110000
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL 877 (928)
.+.|. . -..|..|..+++.++. .+..++|||||.||+.|.
T Consensus 121 -------------~i~~~------------------------~--~~~p~~k~~~l~~~~~-~~~~~v~iGDs~~D~~~~ 160 (205)
T PRK13582 121 -------------MITGY------------------------D--LRQPDGKRQAVKALKS-LGYRVIAAGDSYNDTTML 160 (205)
T ss_pred -------------eEECc------------------------c--ccccchHHHHHHHHHH-hCCeEEEEeCCHHHHHHH
Confidence 00010 0 0236778888887776 678899999999999999
Q ss_pred HhCCccEEecCCch
Q 002391 878 QEADIGIGISGVEG 891 (928)
Q Consensus 878 ~~AdvGIa~~g~e~ 891 (928)
+.|++|+.....+.
T Consensus 161 ~aa~~~v~~~~~~~ 174 (205)
T PRK13582 161 GEADAGILFRPPAN 174 (205)
T ss_pred HhCCCCEEECCCHH
Confidence 99999998755443
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.1e-05 Score=73.72 Aligned_cols=99 Identities=10% Similarity=0.155 Sum_probs=76.4
Q ss_pred HHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCC
Q 002391 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (928)
Q Consensus 725 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (928)
-.|+.|.++||++.++||++-..+..=|+++||-. ++
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~-----~~-------------------------------------- 78 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH-----LY-------------------------------------- 78 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce-----ee--------------------------------------
Confidence 58999999999999999999999999999999821 10
Q ss_pred cCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCCcccHHHHHhCC
Q 002391 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEAD 881 (928)
Q Consensus 805 ~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~---~g~~vlaiGDG~ND~~mL~~Ad 881 (928)
.-.++|....+.+.+. ....|+.+||-.||.|+|+..+
T Consensus 79 ---------------------------------------qG~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vG 119 (170)
T COG1778 79 ---------------------------------------QGISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVG 119 (170)
T ss_pred ---------------------------------------echHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcC
Confidence 0123454444444332 2357999999999999999999
Q ss_pred ccEEecCCchhHHHHhCceeccccc
Q 002391 882 IGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 882 vGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
++++..+.... .+..||||+....
T Consensus 120 ls~a~~dAh~~-v~~~a~~Vt~~~G 143 (170)
T COG1778 120 LSVAVADAHPL-LKQRADYVTSKKG 143 (170)
T ss_pred CcccccccCHH-HHHhhHhhhhccC
Confidence 99999776654 8888999987544
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00017 Score=88.79 Aligned_cols=182 Identities=14% Similarity=0.044 Sum_probs=94.2
Q ss_pred CCCChHHHHHHHHH-cCCcEEEEcCCchhhHHHHHHHcc--ccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhh
Q 002391 719 LQKGVPQCIDKLAQ-AGLKIWVLTGDKMETAINIGFACS--LLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (928)
Q Consensus 719 lr~~~~~~I~~L~~-aGIkv~mlTGD~~~ta~~ia~~~g--ii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (928)
+.+++.++|++|.+ .|+.|+++|||............+ ++..++..+...+..-..... .....++.+...+....
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~-~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEP-VATEWKDAVRPILEEFV 593 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCC-cchhHHHHHHHHHHHHH
Confidence 55788899999999 699999999999998888765444 444554444322111000000 00000111111111111
Q ss_pred hhhhccCCCcCcEEEEEcC----chhhHhhhHHHHHHHHhhhhccCee-----EEEEcCh--hhHHHHHHHHhhc-CCCE
Q 002391 796 QMIKLERDPHAAYALIIEG----KTLAYALEDDMKHHFLGLAVECASV-----ICCRVSP--KQKALVTRLVKEG-TGKT 863 (928)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~G----~~l~~~~~~~~~~~~~~~~~~~~~~-----v~~r~~P--~qK~~iV~~l~~~-~g~~ 863 (928)
..............+...- ..+......++..++.......... -+..+.| -.|+..++.+.+. ....
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 1100000001112222211 1121111122333333322111111 1234445 3799999988764 2368
Q ss_pred EEEEcCCcccHHHHHhC---CccEEecCCchhHHHHhCceeccccc
Q 002391 864 TLAIGDGANDVGMIQEA---DIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 864 vlaiGDG~ND~~mL~~A---dvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
++++||+.||.+|++.+ ++||+|++. ..+|+|.+..+.
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~-----~s~A~~~l~~~~ 714 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVGPG-----ESRARYRLPSQR 714 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEECCC-----CCcceEeCCCHH
Confidence 99999999999999997 577888553 346788777554
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00011 Score=76.49 Aligned_cols=113 Identities=14% Similarity=0.220 Sum_probs=74.0
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhh
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
-+++|++.+.++.|++.|+++.|+||.....+..+....+... . +.-+.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~-i~~n~--------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---R-IYCNE--------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---c-EEece---------------------------
Confidence 4799999999999999999999999999888888887764321 1 11100
Q ss_pred hhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHH
Q 002391 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (928)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~m 876 (928)
+..+|..+...... .| ...+.......|..+++.++. ....++|||||.||..|
T Consensus 118 -------------~~~~~~~~~~~~p~-----------~~-~~~~~~~cg~~K~~~l~~~~~-~~~~~i~iGDg~~D~~~ 171 (214)
T TIGR03333 118 -------------ADFSNEYIHIDWPH-----------PC-DGTCQNQCGCCKPSLIRKLSE-PNDYHIVIGDSVTDVEA 171 (214)
T ss_pred -------------eEeeCCeeEEeCCC-----------CC-ccccccCCCCCHHHHHHHHhh-cCCcEEEEeCCHHHHHH
Confidence 01111111100000 00 000001113579999998876 56778999999999999
Q ss_pred HHhCCccEEe
Q 002391 877 IQEADIGIGI 886 (928)
Q Consensus 877 L~~AdvGIa~ 886 (928)
++.||++++-
T Consensus 172 a~~Ad~~~ar 181 (214)
T TIGR03333 172 AKQSDLCFAR 181 (214)
T ss_pred HHhCCeeEeh
Confidence 9999997764
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.79 E-value=7.8e-05 Score=76.73 Aligned_cols=112 Identities=12% Similarity=0.014 Sum_probs=76.7
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhh
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (928)
..++.+++.+.|+.+++.|++++++||-....+..+++.+|+..--...+......
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 45789999999999999999999999999999999999999832100000000000
Q ss_pred hhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCC---CEEEEEcCCcc
Q 002391 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG---KTTLAIGDGAN 872 (928)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g---~~vlaiGDG~N 872 (928)
..+|.... -.+.++.|...++.+.+..+ ..++++||+.+
T Consensus 141 ---------------~~~g~~~~-----------------------~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~ 182 (202)
T TIGR01490 141 ---------------IYTGNIDG-----------------------NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSIS 182 (202)
T ss_pred ---------------EEeCCccC-----------------------CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcc
Confidence 11121100 01235678776766543233 37899999999
Q ss_pred cHHHHHhCCccEEecCC
Q 002391 873 DVGMIQEADIGIGISGV 889 (928)
Q Consensus 873 D~~mL~~AdvGIa~~g~ 889 (928)
|++|++.|+.++.+...
T Consensus 183 D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 183 DLPLLSLVGHPYVVNPD 199 (202)
T ss_pred cHHHHHhCCCcEEeCCC
Confidence 99999999999988543
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.72 E-value=9.9e-05 Score=70.03 Aligned_cols=43 Identities=21% Similarity=0.274 Sum_probs=39.7
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
..++.+++++.|+.|++.|++++++||.....+....+.+|+.
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 3478999999999999999999999999999999999998874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00012 Score=73.54 Aligned_cols=40 Identities=15% Similarity=0.148 Sum_probs=37.4
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
+++++.+.++.+++.|++++++||.....+..++...|+-
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 6799999999999999999999999999999999998874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00019 Score=72.72 Aligned_cols=114 Identities=15% Similarity=0.161 Sum_probs=74.0
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhh
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-..++ -+...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~-~~~~~------------------------- 124 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIY-SNPAS------------------------- 124 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEe-ccCce-------------------------
Confidence 3789999999999999999999999999999999888888742211111 11100
Q ss_pred hhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEE-cChhhHHHHHHHHhhcC-CCEEEEEcCCcccH
Q 002391 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGT-GKTTLAIGDGANDV 874 (928)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r-~~P~qK~~iV~~l~~~~-g~~vlaiGDG~ND~ 874 (928)
.++.-.... +. ..| ..|.. .....|..+++.++. . ...+++||||.||+
T Consensus 125 ---------------~~~~g~~~~--------~~---~~~--~~~~~~~~g~~K~~~~~~~~~-~~~~~~i~iGD~~~D~ 175 (188)
T TIGR01489 125 ---------------FDNDGRHIV--------WP---HHC--HGCCSCPCGCCKGKVIHKLSE-PKYQHIIYIGDGVTDV 175 (188)
T ss_pred ---------------ECCCCcEEE--------ec---CCC--CccCcCCCCCCHHHHHHHHHh-hcCceEEEECCCcchh
Confidence 000000000 00 000 01111 122358889998876 4 67899999999999
Q ss_pred HHHHhCCccEE
Q 002391 875 GMIQEADIGIG 885 (928)
Q Consensus 875 ~mL~~AdvGIa 885 (928)
.|.+.||+-.|
T Consensus 176 ~aa~~~d~~~a 186 (188)
T TIGR01489 176 CPAKLSDVVFA 186 (188)
T ss_pred chHhcCCcccc
Confidence 99999987543
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00022 Score=74.39 Aligned_cols=110 Identities=13% Similarity=0.185 Sum_probs=71.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
+++||+.+.++.|++.|+++.|+||-....+..+.+.. +.. ..++ .+..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~-~n~~--------------------------- 122 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIY-CNGS--------------------------- 122 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEE-EeEE---------------------------
Confidence 68999999999999999999999999998888888877 522 1111 1100
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEE-EcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICC-RVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~-r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~m 876 (928)
..+|..+...... .....+ ......|..+++.++. ....+++||||.||+.|
T Consensus 123 -------------~~~~~~~~~~kp~-------------p~~~~~~~~~~~~K~~~l~~~~~-~~~~~i~iGDs~~Di~a 175 (219)
T PRK09552 123 -------------DFSGEYITITWPH-------------PCDEHCQNHCGCCKPSLIRKLSD-TNDFHIVIGDSITDLEA 175 (219)
T ss_pred -------------EecCCeeEEeccC-------------CccccccccCCCchHHHHHHhcc-CCCCEEEEeCCHHHHHH
Confidence 1111111000000 000000 0011347788888775 56689999999999999
Q ss_pred HHhCCccEE
Q 002391 877 IQEADIGIG 885 (928)
Q Consensus 877 L~~AdvGIa 885 (928)
.+.||+.++
T Consensus 176 a~~Ag~~~a 184 (219)
T PRK09552 176 AKQADKVFA 184 (219)
T ss_pred HHHCCccee
Confidence 999999776
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00036 Score=73.10 Aligned_cols=41 Identities=17% Similarity=0.420 Sum_probs=38.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.|++.++++.|++.|+++.++||.....+..++..+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999884
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00063 Score=72.16 Aligned_cols=49 Identities=20% Similarity=0.356 Sum_probs=40.1
Q ss_pred EEEcChh--hHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHh-CCccEEecCCch
Q 002391 841 CCRVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQE-ADIGIGISGVEG 891 (928)
Q Consensus 841 ~~r~~P~--qK~~iV~~l~~~~g~~vlaiGD----G~ND~~mL~~-AdvGIa~~g~e~ 891 (928)
+..+.|. .|+..++.++ ....|+|||| |.||.+||+. -=.|+.+++-+.
T Consensus 180 ~iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 180 SFDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 4555654 6999999998 5788999999 8999999997 667889877544
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0016 Score=69.19 Aligned_cols=162 Identities=15% Similarity=0.189 Sum_probs=84.1
Q ss_pred HHHcCCcEEEEcCCchhhHHHHHHHccccccC------ceEEEEeCC-Ccc-hHHHHHHHHHHhhHHHHHHHhhhhh-hc
Q 002391 730 LAQAGLKIWVLTGDKMETAINIGFACSLLRQG------MKQICITAL-NSD-SVGKAAKEAVKDNILMQITNASQMI-KL 800 (928)
Q Consensus 730 L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~------~~~i~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 800 (928)
..+.++.++++|||+...+..+..+.++..++ +..++.... ..+ .-...+..........++......+ ..
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q 110 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGLRPQ 110 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEG
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCcccC
Confidence 44678999999999999999999999875442 233333111 111 1111221111111111111111111 11
Q ss_pred cCC--CcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCee----EEEEcChh--hHHHHHHHHhhcCC---CEEEEEcC
Q 002391 801 ERD--PHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASV----ICCRVSPK--QKALVTRLVKEGTG---KTTLAIGD 869 (928)
Q Consensus 801 ~~~--~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~----v~~r~~P~--qK~~iV~~l~~~~g---~~vlaiGD 869 (928)
... ...+.+..+........+ +++...+......|+.+ -+..+.|. .|...|+.+++..+ ..|+++||
T Consensus 111 ~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aGD 189 (247)
T PF05116_consen 111 PESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVAGD 189 (247)
T ss_dssp GCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEEES
T ss_pred CccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEeC
Confidence 111 122334444444433322 23444333333333221 23445553 69999999987633 46899999
Q ss_pred CcccHHHHHhCCccEEecCCchh
Q 002391 870 GANDVGMIQEADIGIGISGVEGM 892 (928)
Q Consensus 870 G~ND~~mL~~AdvGIa~~g~e~~ 892 (928)
+.||.+||..++-||.+++.+..
T Consensus 190 SgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 190 SGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp SGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCCcHHHHcCcCCEEEEcCCCHH
Confidence 99999999999999999887664
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0025 Score=65.89 Aligned_cols=110 Identities=15% Similarity=0.088 Sum_probs=74.8
Q ss_pred cCCCChHHHHH-HHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhh
Q 002391 718 KLQKGVPQCID-KLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (928)
Q Consensus 718 ~lr~~~~~~I~-~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
.+.|++.++|+ .+++.|++++++|+-....+..+|+..++.... .++..+-.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 47899999996 889899999999999999999999886654321 22221100
Q ss_pred hhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHH
Q 002391 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (928)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~m 876 (928)
+.+|.. +..-.+-.++|..-++..-........+-||+.||.||
T Consensus 147 --------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pm 190 (210)
T TIGR01545 147 --------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPL 190 (210)
T ss_pred --------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHH
Confidence 001100 01112446788766654422123456799999999999
Q ss_pred HHhCCccEEecCCc
Q 002391 877 IQEADIGIGISGVE 890 (928)
Q Consensus 877 L~~AdvGIa~~g~e 890 (928)
|+.||.++++...+
T Consensus 191 L~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 191 LAFCEHRWRVSKRG 204 (210)
T ss_pred HHhCCCcEEECcch
Confidence 99999999995543
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0021 Score=67.17 Aligned_cols=44 Identities=25% Similarity=0.238 Sum_probs=40.4
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~ 759 (928)
...+-+++++++..|+++|++..++|+++...+..+.+..|+..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~ 130 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD 130 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc
Confidence 45688999999999999999999999999999999999998853
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0042 Score=65.97 Aligned_cols=60 Identities=10% Similarity=-0.066 Sum_probs=44.2
Q ss_pred cChhhHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhC--------CccEEecCCchhHHHHhCceeccccc
Q 002391 844 VSPKQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEA--------DIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 844 ~~P~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~A--------dvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
-.+..|...++.+.+..+ ..++++||+.||..|++.+ ..||.|...+ .+..|++++.-+.
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~---~~~~A~~~~~~~~ 233 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS---KKTVAKFHLTGPQ 233 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC---cCCCceEeCCCHH
Confidence 344579888888765433 4799999999999999999 4677774122 4567888887665
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0031 Score=65.97 Aligned_cols=42 Identities=21% Similarity=0.233 Sum_probs=38.2
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
-++.+++.+.++.|++.|++++++||.....+..+.+..|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468899999999999999999999999999888898888873
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0039 Score=72.27 Aligned_cols=40 Identities=18% Similarity=0.135 Sum_probs=38.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
++++++.+.|++++++|++++++|+-....+..+++..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999999999987
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0077 Score=62.39 Aligned_cols=109 Identities=12% Similarity=0.078 Sum_probs=75.4
Q ss_pred cCCCChHHHH-HHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhh
Q 002391 718 KLQKGVPQCI-DKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (928)
Q Consensus 718 ~lr~~~~~~I-~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
.+.|++.+.| +.+++.|++++++|+-...-+..++..+|+.. ...++...-.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4589999999 67888999999999999999999999988632 1122221100
Q ss_pred hhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHH-hhcCCCEEEEEcCCcccHH
Q 002391 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLV-KEGTGKTTLAIGDGANDVG 875 (928)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l-~~~~g~~vlaiGDG~ND~~ 875 (928)
...+|.- ....+..+.|..-++.. .. ......+-||+.||.|
T Consensus 148 -------------~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~-~~~~~~aY~Ds~~D~p 190 (211)
T PRK11590 148 -------------RRYGGWV-----------------------LTLRCLGHEKVAQLERKIGT-PLRLYSGYSDSKQDNP 190 (211)
T ss_pred -------------EEEccEE-----------------------CCccCCChHHHHHHHHHhCC-CcceEEEecCCcccHH
Confidence 0111211 11124567887666644 32 3456679999999999
Q ss_pred HHHhCCccEEecCCc
Q 002391 876 MIQEADIGIGISGVE 890 (928)
Q Consensus 876 mL~~AdvGIa~~g~e 890 (928)
||+.|+.++++....
T Consensus 191 mL~~a~~~~~vnp~~ 205 (211)
T PRK11590 191 LLYFCQHRWRVTPRG 205 (211)
T ss_pred HHHhCCCCEEECccH
Confidence 999999999996544
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0047 Score=63.69 Aligned_cols=41 Identities=27% Similarity=0.322 Sum_probs=37.1
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.++|+.|++.|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 67899999999999999999999999888888888888874
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.019 Score=63.94 Aligned_cols=62 Identities=21% Similarity=0.191 Sum_probs=44.3
Q ss_pred EEcCh---hhHHHHHHHHhhcCC---C---EEEEEcCCcccHHHHHh-----CCccEEecCCchhHHHHhCceeccccc
Q 002391 842 CRVSP---KQKALVTRLVKEGTG---K---TTLAIGDGANDVGMIQE-----ADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 842 ~r~~P---~qK~~iV~~l~~~~g---~---~vlaiGDG~ND~~mL~~-----AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
..+.| -.|...|+.+.+..+ . .+++|||+.||..|++. +++||+|++... .-.|+|-+.-|.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHH
Confidence 34555 389999998876543 1 25899999999999996 589998865332 225677776655
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.03 Score=69.55 Aligned_cols=49 Identities=4% Similarity=-0.018 Sum_probs=37.4
Q ss_pred cCCCChHHHHHHH-HHcCCcEEEEcCCchhhHHHHHHH---ccccccCceEEE
Q 002391 718 KLQKGVPQCIDKL-AQAGLKIWVLTGDKMETAINIGFA---CSLLRQGMKQIC 766 (928)
Q Consensus 718 ~lr~~~~~~I~~L-~~aGIkv~mlTGD~~~ta~~ia~~---~gii~~~~~~i~ 766 (928)
.+-+++.+++++| ++.|+.|+++|||...+....... ++++..++..+.
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir 668 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLR 668 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEE
Confidence 4556888999997 777999999999999998887754 456655554443
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.011 Score=63.97 Aligned_cols=41 Identities=12% Similarity=0.150 Sum_probs=36.3
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
.++.+++.++|+.|++.|++++++||.+...+..+....|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 46789999999999999999999999988888777777776
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.011 Score=62.82 Aligned_cols=45 Identities=13% Similarity=0.248 Sum_probs=40.8
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGM 762 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~ 762 (928)
+++||+.+.++.|++.|+++.++||=....+..+.++.|+...+.
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~ 165 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV 165 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc
Confidence 579999999999999999999999999999999999999865543
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.013 Score=57.50 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=31.5
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHH
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~ 749 (928)
+|.+.+++.+++++++++|++++++|||+...+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999998874
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0093 Score=61.77 Aligned_cols=41 Identities=20% Similarity=0.189 Sum_probs=37.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.++++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 57899999999999999999999999988888888888874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0014 Score=53.52 Aligned_cols=45 Identities=24% Similarity=0.225 Sum_probs=38.2
Q ss_pred ccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhcc
Q 002391 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVT 95 (928)
Q Consensus 48 ~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i 95 (928)
.+++.+||.|.+..++.+.++ +.+++||.+|+.++++++++++++
T Consensus 17 ~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 17 ARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 457789999999988754443 889999999999999999999876
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0011 Score=55.09 Aligned_cols=43 Identities=33% Similarity=0.420 Sum_probs=36.4
Q ss_pred ccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHh
Q 002391 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLS 93 (928)
Q Consensus 48 ~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~ 93 (928)
..|+.+||.|.++..+...++ +.|++||.+|++++++++++++
T Consensus 27 ~~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 27 EERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 456789999999776665554 8999999999999999999885
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.013 Score=60.73 Aligned_cols=41 Identities=17% Similarity=0.041 Sum_probs=37.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+|+.++++.|+++|+++.++||.....+..+....|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 37799999999999999999999999998888888888874
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.02 Score=59.60 Aligned_cols=40 Identities=18% Similarity=0.183 Sum_probs=33.1
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
++.||+.++|+.|+++|+++.++|+.....+...-...|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999877666555555555
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.027 Score=59.12 Aligned_cols=41 Identities=22% Similarity=0.073 Sum_probs=35.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.+.++.|++.|+++.++|+.....+..+-...|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 57899999999999999999999999888777777777763
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.016 Score=60.47 Aligned_cols=42 Identities=19% Similarity=0.179 Sum_probs=38.0
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
-++-+++.++|+.|++.|+++.++||.....+..+.+..|+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 367899999999999999999999999998888888888874
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.019 Score=61.87 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=37.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57799999999999999999999999999999998888874
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.15 Score=56.60 Aligned_cols=73 Identities=16% Similarity=0.227 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhh---------cccEEEeeeeecc--cCCCChHHHHHHHHHcCCcEEE
Q 002391 671 ESEYSAWNSEFQKAKSSIGADREATLEHVSDMME---------KDLILVGATAVED--KLQKGVPQCIDKLAQAGLKIWV 739 (928)
Q Consensus 671 ~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie---------~dl~llG~~~i~D--~lr~~~~~~I~~L~~aGIkv~m 739 (928)
..+|..|..++..|...+ +++..... -|.+|+-++.-.| .+-+++.++|++|. .|+++++
T Consensus 83 ~~~~~~w~~~~psal~~~--------~~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaI 153 (366)
T PLN03017 83 QQQLNSWIMQHPSALEMF--------EQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAI 153 (366)
T ss_pred hhhhhHHHhhCChHHHHH--------HHHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEE
Confidence 467788888887766544 11221111 2333333332233 36788899999999 7899999
Q ss_pred EcCCchhhHHHHH
Q 002391 740 LTGDKMETAINIG 752 (928)
Q Consensus 740 lTGD~~~ta~~ia 752 (928)
+|||....+..+.
T Consensus 154 vSGR~~~~l~~~~ 166 (366)
T PLN03017 154 VTGRCIDKVYNFV 166 (366)
T ss_pred EeCCCHHHHHHhh
Confidence 9999999988874
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.029 Score=57.36 Aligned_cols=43 Identities=21% Similarity=0.111 Sum_probs=38.5
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+++.++++++++.|++.|+++.++||.....+..+.+.+|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4556778899999999999999999999999999999999874
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.014 Score=61.22 Aligned_cols=40 Identities=18% Similarity=0.167 Sum_probs=34.8
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCC----chhhHHHHHHHcccc
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGD----KMETAINIGFACSLL 758 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD----~~~ta~~ia~~~gii 758 (928)
+.+++.+.++.|+++|+++.++|++ ...++..+.+..|+.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 4455999999999999999999999 666888998888883
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.02 Score=59.92 Aligned_cols=40 Identities=18% Similarity=0.186 Sum_probs=34.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCc----hhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK----METAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~----~~ta~~ia~~~gi 757 (928)
.+.+++.+.|+.|++.|+++.++|||. ..++..+.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 467889999999999999999999985 4478888877777
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.036 Score=59.32 Aligned_cols=41 Identities=15% Similarity=0.095 Sum_probs=37.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+|+.++++.|++.|+++.++|+.....+..+-..+|+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 149 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGME 149 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCH
Confidence 56899999999999999999999999999898888888874
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.022 Score=62.55 Aligned_cols=44 Identities=20% Similarity=0.086 Sum_probs=40.2
Q ss_pred ecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 715 i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
..+++.+++.++|+.|++.|++++++||++...+..+...+++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 46789999999999999999999999999999999988888773
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.036 Score=56.73 Aligned_cols=40 Identities=15% Similarity=0.218 Sum_probs=36.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
++.+++.++++.|++.|++++++|+-+...+..+...+|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 4779999999999999999999999888888888888886
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.039 Score=52.34 Aligned_cols=40 Identities=20% Similarity=0.243 Sum_probs=34.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCc--------hhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK--------METAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~--------~~ta~~ia~~~gi 757 (928)
++.+++.++++.|+++|++++++|+.. ...+..+...+|+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 578999999999999999999999988 6666777777776
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.05 Score=56.66 Aligned_cols=42 Identities=19% Similarity=0.163 Sum_probs=38.5
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.++.+|+.+.++.|++.|+++.++||-....+..+.+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 378999999999999999999999999999999988888874
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.097 Score=55.71 Aligned_cols=41 Identities=22% Similarity=0.075 Sum_probs=37.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.|++.++++.|++.|+++.++|+-....+..+....|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 46799999999999999999999999999999888888874
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.15 Score=57.00 Aligned_cols=41 Identities=12% Similarity=0.128 Sum_probs=37.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+.+|+.+.++.|++.|+++.++|+.....+..+-...||.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 46799999999999999999999999999999998888874
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.095 Score=52.15 Aligned_cols=49 Identities=20% Similarity=0.163 Sum_probs=40.5
Q ss_pred EEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCC-chhhHHHHHHHccc
Q 002391 709 LVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGD-KMETAINIGFACSL 757 (928)
Q Consensus 709 llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD-~~~ta~~ia~~~gi 757 (928)
.....+-+-++.+|+.++++.|+++|+++.++|+- ....+..+....|+
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l 85 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEI 85 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCc
Confidence 44444555578899999999999999999999976 78888888877776
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.1 Score=55.69 Aligned_cols=41 Identities=27% Similarity=0.195 Sum_probs=36.8
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++-||+.+.|+.|++.|+++.++||.....+..+.+..|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 46799999999999999999999999999888888887774
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.11 Score=54.21 Aligned_cols=41 Identities=15% Similarity=0.058 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+|+.+.++.|+++|+++.++|+-....+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 57899999999999999999999998888777766667763
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.084 Score=52.18 Aligned_cols=43 Identities=14% Similarity=0.174 Sum_probs=39.4
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
..++.+++.+.++.|++.|++++++|+.....+....+..|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 4578899999999999999999999999999999999999885
|
... |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.12 Score=53.66 Aligned_cols=41 Identities=12% Similarity=0.130 Sum_probs=36.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.++|+.|++.|++++++|+-....+....+.+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 57899999999999999999999998887777777777763
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.1 Score=50.79 Aligned_cols=109 Identities=15% Similarity=0.213 Sum_probs=67.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
+++|+-++.++.+++.+|+++++||-...-..++-...+ ..+ .+..++-.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~iv--gke-~i~~idi~--------------------------- 122 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIV--GKE-RIYCIDIV--------------------------- 122 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhc--ccc-ceeeeEEe---------------------------
Confidence 588999999999999999999999877666666655443 110 00000000
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcC--hhhHHHHHHHHhhcCCCEEEEEcCCcccHH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVS--PKQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~--P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ 875 (928)
.....+-++|.- .+++-.-+ --+|..+|+.+++ +.+.+.+||||..|++
T Consensus 123 -------sn~~~ih~dg~h---------------------~i~~~~ds~fG~dK~~vI~~l~e-~~e~~fy~GDsvsDls 173 (220)
T COG4359 123 -------SNNDYIHIDGQH---------------------SIKYTDDSQFGHDKSSVIHELSE-PNESIFYCGDSVSDLS 173 (220)
T ss_pred -------ecCceEcCCCce---------------------eeecCCccccCCCcchhHHHhhc-CCceEEEecCCccccc
Confidence 000111112210 11111112 2368999999998 7888999999999999
Q ss_pred HHHhCCccEE
Q 002391 876 MIQEADIGIG 885 (928)
Q Consensus 876 mL~~AdvGIa 885 (928)
+-+.+|+=.|
T Consensus 174 aaklsDllFA 183 (220)
T COG4359 174 AAKLSDLLFA 183 (220)
T ss_pred HhhhhhhHhh
Confidence 8777666544
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.12 Score=55.70 Aligned_cols=41 Identities=24% Similarity=0.128 Sum_probs=35.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++-||+.++|+.|++.|+++.++||.....+..+-+..++.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56799999999999999999999999988877776666653
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.57 Score=47.11 Aligned_cols=37 Identities=8% Similarity=0.137 Sum_probs=31.9
Q ss_pred ChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 722 GVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 722 ~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+.+.+..|+++|++|+.+|.-........-+++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999998888777888888753
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.081 Score=53.27 Aligned_cols=38 Identities=21% Similarity=0.262 Sum_probs=30.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
++.|++.++|+.|+++|+++.++|+... +..+.+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 6789999999999999999999997532 3455666665
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.18 Score=50.42 Aligned_cols=40 Identities=23% Similarity=0.228 Sum_probs=30.2
Q ss_pred ccEEEeeeeecc----cCCCChHHHHHHHHHcCCcEEEEcCCch
Q 002391 706 DLILVGATAVED----KLQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (928)
Q Consensus 706 dl~llG~~~i~D----~lr~~~~~~I~~L~~aGIkv~mlTGD~~ 745 (928)
|.++.|-..+.+ ++.|+++++++.|++.|+++.++|+...
T Consensus 12 d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 12 DGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 455544433332 3679999999999999999999998753
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.16 Score=50.90 Aligned_cols=40 Identities=23% Similarity=0.210 Sum_probs=33.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.++++.|++.|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 578999999999999999999999988776 4454446663
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.12 Score=52.09 Aligned_cols=40 Identities=15% Similarity=0.229 Sum_probs=33.4
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
-++.+|+.++|+.|++.|+++.++|+. ..+..+.+..|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 368899999999999999999999987 5566666677763
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.17 Score=55.05 Aligned_cols=38 Identities=24% Similarity=0.278 Sum_probs=32.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (928)
++.||+.+.++.|++.|+++.++|+-....+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998877766555443
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.25 Score=57.74 Aligned_cols=41 Identities=15% Similarity=0.080 Sum_probs=38.1
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.||+.+.|+.|++.|+++.++|+.....+..+...+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 67899999999999999999999999999999998888874
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.17 Score=48.98 Aligned_cols=27 Identities=26% Similarity=0.401 Sum_probs=24.8
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~ 744 (928)
++.+++.++++.|++.|+++.++|...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 468999999999999999999999865
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.2 Score=49.85 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=33.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCc-hhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK-METAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~-~~ta~~ia~~~gi 757 (928)
.+.+++.++++.|++.|++++++|+.+ ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 577999999999999999999999987 4556666666665
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.63 E-value=1.5 Score=48.58 Aligned_cols=74 Identities=20% Similarity=0.230 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhc-c----cEEEeeee----eccc--CCCChHHHHHHHHHcCCcEEEE
Q 002391 672 SEYSAWNSEFQKAKSSIGADREATLEHVSDMMEK-D----LILVGATA----VEDK--LQKGVPQCIDKLAQAGLKIWVL 740 (928)
Q Consensus 672 ~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~-d----l~llG~~~----i~D~--lr~~~~~~I~~L~~aGIkv~ml 740 (928)
.+|..|..++..|...+ +++...... . +.|=|.++ --|. +-+++.++|+.|. .+..|+++
T Consensus 71 ~~~~~w~~~~p~a~~~~--------~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIv 141 (354)
T PLN02151 71 NKQSCWIKEHPSALNMF--------EEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIV 141 (354)
T ss_pred hhHHHHHHhCChHHHHH--------HHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEE
Confidence 57889999988877654 112221111 1 12233333 2232 4567889999999 56899999
Q ss_pred cCCchhhHHHHHHH
Q 002391 741 TGDKMETAINIGFA 754 (928)
Q Consensus 741 TGD~~~ta~~ia~~ 754 (928)
|||.......+..-
T Consensus 142 SGR~~~~l~~~~~~ 155 (354)
T PLN02151 142 SGRCREKVSSFVKL 155 (354)
T ss_pred ECCCHHHHHHHcCC
Confidence 99999988877643
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.36 Score=51.48 Aligned_cols=41 Identities=12% Similarity=0.126 Sum_probs=32.1
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHH---HHHHHccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI---NIGFACSL 757 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~---~ia~~~gi 757 (928)
.++-+++.+.++.|++.|+++.++|++...... ...+..|+
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi 160 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGF 160 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCc
Confidence 457799999999999999999999999855433 33444565
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.32 Score=50.75 Aligned_cols=39 Identities=15% Similarity=0.064 Sum_probs=33.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
++.+++.++++.|+ +|+++.++|+.....+...-...|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 46799999999999 6899999999887777777677776
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.19 E-value=0.26 Score=51.38 Aligned_cols=31 Identities=23% Similarity=0.354 Sum_probs=27.1
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETA 748 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta 748 (928)
++.+|+.++|+.|++.|+++.++||-.....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 5779999999999999999999998765533
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.48 Score=46.03 Aligned_cols=40 Identities=15% Similarity=0.320 Sum_probs=33.3
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (928)
+....+++.+.++.|++.|+++.++|+.....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3345689999999999999999999999988877766553
|
HAD subfamilies caused by an overly broad single model. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.45 Score=47.86 Aligned_cols=27 Identities=30% Similarity=0.363 Sum_probs=24.7
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~ 744 (928)
.+.+|+.++++.|++.|+++.++|...
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 367999999999999999999999876
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.26 Score=55.90 Aligned_cols=40 Identities=13% Similarity=0.043 Sum_probs=33.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHH-Hccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF-ACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~-~~gi 757 (928)
++.+|+.+.++.|++.|+++.|+|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998877766544 4555
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.43 Score=48.02 Aligned_cols=147 Identities=17% Similarity=0.231 Sum_probs=81.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCce--EEEEeCCC-cchHHHHHHHHHHhhHHHHHHHh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMK--QICITALN-SDSVGKAAKEAVKDNILMQITNA 794 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~--~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 794 (928)
++-||+.++++.|++.=-.+++-|. -..-+..+|.-+|+-..+-. .+-++... +++.. ..+...+
T Consensus 83 ~lvPgA~etm~~l~~~~tp~v~STS-Y~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR--------~E~L~~~--- 150 (315)
T COG4030 83 KLVPGAEETMATLQERWTPVVISTS-YTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEER--------EELLSII--- 150 (315)
T ss_pred ccCCChHHHHHHHhccCCceEEecc-HHHHHHHHHHhcCCCccccccccccCccccCChHHH--------HHHHHhc---
Confidence 5679999999999987556666554 33446778888887332211 11111111 11100 0000000
Q ss_pred hhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcCh---------------hhHHHHHHHHhhc
Q 002391 795 SQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP---------------KQKALVTRLVKEG 859 (928)
Q Consensus 795 ~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P---------------~qK~~iV~~l~~~ 859 (928)
...-.++|+.|..-+++ +|.|..| ..|+++++.+-+.
T Consensus 151 ------------~~~~~~~geelfe~lDe----------------~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~el 202 (315)
T COG4030 151 ------------DVIASLSGEELFEKLDE----------------LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCEL 202 (315)
T ss_pred ------------CccccccHHHHHHHHHH----------------HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhh
Confidence 00114556555443332 2233333 3467777766543
Q ss_pred CC--CEEEEEcCCcccHHHHHhCC----ccEEecCCchhHHHHhCceeccccc
Q 002391 860 TG--KTTLAIGDGANDVGMIQEAD----IGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 860 ~g--~~vlaiGDG~ND~~mL~~Ad----vGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
.+ ...+.+||+..|+.||+.+. +.|+..|++= |..-||.+..-|.
T Consensus 203 e~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvisp~ 253 (315)
T COG4030 203 EGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVISPT 253 (315)
T ss_pred cCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEeccc
Confidence 22 23688999999999999885 4456677776 7777787765555
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.74 E-value=0.12 Score=50.23 Aligned_cols=41 Identities=15% Similarity=0.000 Sum_probs=36.3
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
.-+++||+.+.++.|+ .++++.++|.-....+..+...+++
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 3468999999999999 5799999999999999998888776
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.51 Score=48.33 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=31.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
++-+++.++++.|++.|+++.++|+-... +......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 57799999999999999999999985543 4555556665
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.26 Score=46.44 Aligned_cols=39 Identities=10% Similarity=0.064 Sum_probs=32.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCC-chhhHHHHHHHcc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGD-KMETAINIGFACS 756 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD-~~~ta~~ia~~~g 756 (928)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 6666666655544
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=92.52 E-value=0.5 Score=49.01 Aligned_cols=30 Identities=23% Similarity=0.292 Sum_probs=27.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~t 747 (928)
+.-+++.++++.|++.|++|+++|||....
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 566899999999999999999999999755
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.51 Score=46.45 Aligned_cols=26 Identities=35% Similarity=0.542 Sum_probs=23.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCC
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGD 743 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD 743 (928)
++-+++.++|+.|+++|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 45689999999999999999999974
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.46 E-value=0.61 Score=51.90 Aligned_cols=25 Identities=32% Similarity=0.486 Sum_probs=23.7
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcC
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTG 742 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTG 742 (928)
++.|++.++|+.|+++|+++.|+|+
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEEC
Confidence 5789999999999999999999998
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=91.09 E-value=1.1 Score=43.47 Aligned_cols=114 Identities=18% Similarity=0.120 Sum_probs=70.2
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhh
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (928)
+|..++++.+..+.++++|++++-+|+|+.-.|...-.-+.=...++
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~--------------------------------- 71 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQG--------------------------------- 71 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCC---------------------------------
Confidence 37999999999999999999999999999776654322111000000
Q ss_pred hhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc----CCCEEEEEcCCc
Q 002391 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG----TGKTTLAIGDGA 871 (928)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~----~g~~vlaiGDG~ 871 (928)
.....--+..+-..+...+. ..+..+-.-+.|...++.++.. .....+++|...
T Consensus 72 -------~~lP~Gpv~~sP~~l~~al~---------------rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~ 129 (157)
T PF08235_consen 72 -------HNLPDGPVLLSPDSLFSALH---------------REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRS 129 (157)
T ss_pred -------ccCCCCCEEECCcchhhhhh---------------ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcH
Confidence 00000001111111111110 1133444456788888888764 346789999999
Q ss_pred ccHHHHHhCCccE
Q 002391 872 NDVGMIQEADIGI 884 (928)
Q Consensus 872 ND~~mL~~AdvGI 884 (928)
+|+.+-++++|--
T Consensus 130 tDv~aY~~vGip~ 142 (157)
T PF08235_consen 130 TDVIAYKAVGIPK 142 (157)
T ss_pred HHHHHHHHcCCCh
Confidence 9999999888763
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=90.82 E-value=0.77 Score=48.36 Aligned_cols=67 Identities=19% Similarity=0.133 Sum_probs=32.8
Q ss_pred eeEEEEcChhhHHHHHHHHhhcCC------CEEEEEcCCcccHHHHHhCC------ccEEecCCchhHHHHhCceeccc
Q 002391 838 SVICCRVSPKQKALVTRLVKEGTG------KTTLAIGDGANDVGMIQEAD------IGIGISGVEGMQIVLSGHDMRKC 904 (928)
Q Consensus 838 ~~v~~r~~P~qK~~iV~~l~~~~g------~~vlaiGDG~ND~~mL~~Ad------vGIa~~g~e~~~a~~aaD~v~~~ 904 (928)
.+|=.|-.-..|..+|+.+.+..+ ..++++||...|-.|++... +||-++..+.-.-.-+|+|-+..
T Consensus 155 ~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 155 KVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp SEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 344455544569999998876543 36999999999999999855 45545443311133455555443
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=90.78 E-value=0.83 Score=47.41 Aligned_cols=40 Identities=20% Similarity=0.307 Sum_probs=35.8
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.+.++.|++. ++++++|+-....+..+....|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999998888888888888874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.74 E-value=1.1 Score=45.76 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=26.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~t 747 (928)
++.+++.++++.|+++|+++.++|.-+...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 468999999999999999999999976554
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=90.16 E-value=0.84 Score=50.55 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=33.1
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 754 (928)
++.+++.++|+.|++.|+++.++|.-+...|..+.+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3468899999999999999999999999988888776
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.92 E-value=0.78 Score=53.01 Aligned_cols=187 Identities=14% Similarity=0.143 Sum_probs=103.5
Q ss_pred HhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCc-c--h---
Q 002391 701 DMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNS-D--S--- 774 (928)
Q Consensus 701 ~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~-~--~--- 774 (928)
++.-.+-.|.|++...-+.+.+....|+.|-++-|+.+-.+-.+.....-.|+++||-..-.--+.+.++.. . +
T Consensus 809 ~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~p 888 (1354)
T KOG4383|consen 809 DQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGP 888 (1354)
T ss_pred HHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCC
Confidence 334467789999999999999999999999999999999999999999999999998643222222221110 0 0
Q ss_pred -HHHHHH-HHHHhhHHHHHHHhhhh---hhccCCCcCcEEEEEcCchhhHhhh-H----------HHHHHHHhhhhc-cC
Q 002391 775 -VGKAAK-EAVKDNILMQITNASQM---IKLERDPHAAYALIIEGKTLAYALE-D----------DMKHHFLGLAVE-CA 837 (928)
Q Consensus 775 -~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~lvi~G~~l~~~~~-~----------~~~~~~~~~~~~-~~ 837 (928)
..+... +....+...++...+.. ...++.......+--...+.....+ + ....|+.++... --
T Consensus 889 a~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLL 968 (1354)
T KOG4383|consen 889 AHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLL 968 (1354)
T ss_pred CChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCccee
Confidence 000000 00000000011000000 0000000000000000000000000 0 011122111100 01
Q ss_pred eeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHH--HHHhCCccEEecC
Q 002391 838 SVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVG--MIQEADIGIGISG 888 (928)
Q Consensus 838 ~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~--mL~~AdvGIa~~g 888 (928)
+-.|..++|+.-.++++.+|+ .|++|+..|..+|-.. .+-+|||+|++-.
T Consensus 969 V~LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~ 1020 (1354)
T KOG4383|consen 969 VGLFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDD 1020 (1354)
T ss_pred eeeccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEecc
Confidence 236888999999999999999 7999999999988543 4578999998743
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=89.84 E-value=1.2 Score=48.98 Aligned_cols=47 Identities=30% Similarity=0.437 Sum_probs=39.3
Q ss_pred eeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHH---HHccc
Q 002391 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG---FACSL 757 (928)
Q Consensus 711 G~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia---~~~gi 757 (928)
|++.-.+.+=+++.++|+.|++.|++++++|++...+...++ ..+|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 666666777799999999999999999999999988777776 44565
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=89.80 E-value=1.1 Score=44.50 Aligned_cols=27 Identities=26% Similarity=0.431 Sum_probs=23.5
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCch
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~~ 745 (928)
+-+++.++|+.|+++|+++.++|.-..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999996443
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=89.78 E-value=1.7 Score=43.41 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=24.4
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCch
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~~ 745 (928)
+.|++.++|+.|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 578999999999999999999997653
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=89.65 E-value=1.9 Score=44.74 Aligned_cols=39 Identities=18% Similarity=0.214 Sum_probs=32.2
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHH
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 754 (928)
+-++.+++.++++.|+++|+++.++|..+......+...
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 457899999999999999999999999877665555443
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=89.51 E-value=0.72 Score=47.56 Aligned_cols=29 Identities=24% Similarity=0.290 Sum_probs=25.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ 746 (928)
++.+++.++++.|++.|++++++|.....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 57799999999999999999999986543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=88.47 E-value=2.4 Score=44.36 Aligned_cols=41 Identities=15% Similarity=0.154 Sum_probs=36.2
Q ss_pred cCCCChHHHHHHH--HHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKL--AQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L--~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
|+.++.+++++.+ +..|+.+.++|--+..-...+-+.-|+-
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 6789999999999 5589999999999988888888888874
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=87.97 E-value=2.3 Score=45.01 Aligned_cols=48 Identities=10% Similarity=0.127 Sum_probs=36.8
Q ss_pred eeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHH--HHHHHcccc
Q 002391 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI--NIGFACSLL 758 (928)
Q Consensus 711 G~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~--~ia~~~gii 758 (928)
|.+.-...+-|++.++|+.|+++|+++.++|.-....+. .....+|+-
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555556778899999999999999999999995544333 455667763
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.10 E-value=3.4 Score=41.19 Aligned_cols=49 Identities=20% Similarity=0.420 Sum_probs=36.6
Q ss_pred CeeEEEEcChhh--------HHHHHHHHhhc--CCCEEEEEcCCcccHHHHHhCCccEEe
Q 002391 837 ASVICCRVSPKQ--------KALVTRLVKEG--TGKTTLAIGDGANDVGMIQEADIGIGI 886 (928)
Q Consensus 837 ~~~v~~r~~P~q--------K~~iV~~l~~~--~g~~vlaiGDG~ND~~mL~~AdvGIa~ 886 (928)
..+.+|..-|++ ...+.++++++ .-....+|||-..|+.+-..|+++ ++
T Consensus 88 d~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 88 DGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred ceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 456777777764 36677777764 226789999999999999998887 44
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=86.55 E-value=3.1 Score=42.26 Aligned_cols=39 Identities=13% Similarity=0.020 Sum_probs=26.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
++.||+.++++.|++.+ +.+++|.-+.......-..+++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 46899999999999975 5677776544443333344444
|
2 hypothetical protein; Provisional |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.67 E-value=4.6 Score=39.23 Aligned_cols=39 Identities=15% Similarity=0.239 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
.-|++.+=+..++++|+++.++|--+..-+..++..+|+
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 557778888999999999999999888888888988887
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.43 E-value=19 Score=36.32 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=41.8
Q ss_pred cEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHc
Q 002391 707 LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (928)
Q Consensus 707 l~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (928)
+.+-|.+.++|..-|++.|+++.|++++.+|..+|.-..++-..+.+.+
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL 60 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL 60 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH
Confidence 4567999999999999999999999999999999988877766665544
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=83.19 E-value=2.5 Score=44.27 Aligned_cols=30 Identities=17% Similarity=0.277 Sum_probs=26.7
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchh
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ 746 (928)
++.=|++.+.++.+++.|++|+.+|||+..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 345588999999999999999999999876
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=82.66 E-value=1.3 Score=39.86 Aligned_cols=47 Identities=15% Similarity=0.194 Sum_probs=35.5
Q ss_pred eeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHH---HHccc
Q 002391 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG---FACSL 757 (928)
Q Consensus 711 G~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia---~~~gi 757 (928)
|++...+++=|++.++|+.|+++|++++++|-....+...++ +.+|+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 556667788899999999999999999999998866655544 44565
|
... |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.42 E-value=19 Score=38.37 Aligned_cols=166 Identities=7% Similarity=-0.004 Sum_probs=82.1
Q ss_pred cccCCCChHHHHHHHHHc-CCcEEEEcCCchhhHHHHHHHc--cccccCceEE-EEeCCCcchHHHHHHHHHHhhHHHHH
Q 002391 716 EDKLQKGVPQCIDKLAQA-GLKIWVLTGDKMETAINIGFAC--SLLRQGMKQI-CITALNSDSVGKAAKEAVKDNILMQI 791 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~--gii~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (928)
...+-++..+.+++|... ..-+||+||+++........-- ||+..++-.+ ..++.................+-..+
T Consensus 38 ~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l 117 (266)
T COG1877 38 AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAIL 117 (266)
T ss_pred ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHH
Confidence 345667888999999887 4579999999999888876533 3444443333 33333222111111111011111111
Q ss_pred HHhhhhhhccCCCcCcEEEEEcCchhhHhhhH--HHHHHHHhhh------hccCeeEEEEcChhhHHHHHHHHhhcCC--
Q 002391 792 TNASQMIKLERDPHAAYALIIEGKTLAYALED--DMKHHFLGLA------VECASVICCRVSPKQKALVTRLVKEGTG-- 861 (928)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~--~~~~~~~~~~------~~~~~~v~~r~~P~qK~~iV~~l~~~~g-- 861 (928)
...........-....+++.+.=.....-... .+........ ..-+.+|-+|-+-.-|+.+++.+.+..+
T Consensus 118 ~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~ 197 (266)
T COG1877 118 EYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFD 197 (266)
T ss_pred HHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCC
Confidence 11111111000001111111111000000000 0001000000 1224567788777779999997776533
Q ss_pred -CEEEEEcCCcccHHHHHhCC
Q 002391 862 -KTTLAIGDGANDVGMIQEAD 881 (928)
Q Consensus 862 -~~vlaiGDG~ND~~mL~~Ad 881 (928)
..++..||...|-.|++..+
T Consensus 198 ~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 198 GRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred CCcceecCCCCccHHHHHhhc
Confidence 35889999999999999988
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.39 E-value=2.9 Score=43.41 Aligned_cols=38 Identities=8% Similarity=0.114 Sum_probs=30.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.++++++|+.| ++++.++|+.....+...-+..|+.
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 4668999999998 4999999998887777766666663
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=81.61 E-value=4.5 Score=52.18 Aligned_cols=41 Identities=20% Similarity=0.032 Sum_probs=36.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+-+|+.+.++.|+++|++++++|+-....+..+.+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 36799999999999999999999999988888888888873
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=80.60 E-value=5 Score=40.20 Aligned_cols=38 Identities=11% Similarity=-0.018 Sum_probs=31.8
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.++++.|+ .+++++|+-+...+..+....|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 36789999999997 589999998888888888888873
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=80.03 E-value=2.7 Score=44.87 Aligned_cols=47 Identities=17% Similarity=0.251 Sum_probs=36.4
Q ss_pred eeeeeccc----CCCChHHHHHHHHHcCCcEEEEcCCchhh---HHHHHHHccc
Q 002391 711 GATAVEDK----LQKGVPQCIDKLAQAGLKIWVLTGDKMET---AINIGFACSL 757 (928)
Q Consensus 711 G~~~i~D~----lr~~~~~~I~~L~~aGIkv~mlTGD~~~t---a~~ia~~~gi 757 (928)
|.+.-.+. +-+++.++|+.|+++|++++++||++..+ ......++|+
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~ 63 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGF 63 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 44444455 77899999999999999999999988776 4444555676
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 928 | ||||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-10 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 3e-09 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 5e-09 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-04 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-04 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-04 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 5e-04 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 7e-04 |
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 928 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 3e-31 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 2e-26 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 5e-05 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 2e-25 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 7e-05 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 5e-21 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 7e-07 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 2e-20 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 2e-05 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 8e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 1e-06 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 1e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 3e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 5e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 6e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 7e-05 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 3e-31
Identities = 100/493 (20%), Positives = 153/493 (31%), Gaps = 132/493 (26%)
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRES 469
E LG I SDKTGTLT NQM SV +M I +
Sbjct: 341 ETLGCTSVICSDKTGTLTTNQM-----SV-----------------CKMFIIDKVDGDFC 378
Query: 470 ANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRI 529
+ + +GS + E L + ++ D L+ I
Sbjct: 379 SLNEFSITGS---------------------TYAPEGEVLKNDKPIRSGQFDGLVELATI 417
Query: 530 LAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589
A+C+ + + NE G E E A + + ++ ER
Sbjct: 418 CALCNDSSLDFNETKGVYEKVGE-ATETALTTLVEKMNV--FNTEVRNLSKVERANACNS 474
Query: 590 PVEREFKILNLLDFTSKRKRMSVIVRDEDGQI-----LLLCKGADSIIFDRLSK---NGR 641
+ + K L+F+ RK MSV + KGA + DR +
Sbjct: 475 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTT 534
Query: 642 MYE------EATTKLLNEYGEA--GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADRE 693
E ++ E+G LR LALA + +
Sbjct: 535 RVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKR----------------EEMV 578
Query: 694 ATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF 753
E DL VG + D +K V I AG+++ ++TGD TAI I
Sbjct: 579 LDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC- 637
Query: 754 ACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIE 813
++I I N + +A
Sbjct: 638 ---------RRIGIFGENEEVADRA---------------------------------YT 655
Query: 814 GKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVK--EGTGKTTLAIGDGA 871
G+ DD+ A A RV P K +++V+ + + T GDG
Sbjct: 656 GREF-----DDLPLAEQREACRRACCF-ARVEPSHK---SKIVEYLQSYDEITAMTGDGV 706
Query: 872 NDVGMIQEADIGI 884
ND +++A+IGI
Sbjct: 707 NDAPALKKAEIGI 719
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 2e-26
Identities = 83/393 (21%), Positives = 133/393 (33%), Gaps = 87/393 (22%)
Query: 517 EPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAES----PDEAAFLVAAREFGFEFYR 572
+ + +T R+L +C+ A + E A L +
Sbjct: 422 DQSSETWRALCRVLTLCNRA--AFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG 479
Query: 573 RTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDED---GQILLLCKGAD 629
RER+P + +I F S K I ED + +L+ KGA
Sbjct: 480 -------YRERFP-------KVCEI----PFNSTNKFQLSIHTLEDPRDPRHVLVMKGAP 521
Query: 630 SIIFDRLSK---NGR---MYEEATTKLL---NEYGEAGLRTLALAYKQLDESEYSAWNSE 680
+ +R S G+ + E+ G G R L L E +Y +
Sbjct: 522 ERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAF 581
Query: 681 FQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740
D EA + L G ++ D + VP + K AG+++ ++
Sbjct: 582 ----------DVEAM-----NFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMV 626
Query: 741 TGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKL 800
TGD TA I + I + S++V A ++
Sbjct: 627 TGDHPITAKAIA----------ASVGIISEGSETVEDIAAR-------------LRVPVD 663
Query: 801 ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVIC-CRVSPKQKALVTRLVKE- 858
+ + A A +I G L DM L A+ + R SP+QK +V+
Sbjct: 664 QVNRKDARACVINGMQL-----KDMDPSELVEALRTHPEMVFARTSPQQK---LVIVESC 715
Query: 859 -GTGKTTLAIGDGANDVGMIQEADIGI--GISG 888
G GDG ND +++ADIG+ GI+G
Sbjct: 716 QRLGAIVAVTGDGVNDSPALKKADIGVAMGIAG 748
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 5e-05
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSE 449
E LG I SDKTGTLT N+M + +E
Sbjct: 375 ETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTE 414
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-25
Identities = 90/393 (22%), Positives = 137/393 (34%), Gaps = 87/393 (22%)
Query: 517 EPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAES----PDEAAFLVAAREFGFEFYR 572
+ T RI A+C+ A N+ S E+A L
Sbjct: 417 DKTSATWSALSRIAALCNRA--VFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQG 474
Query: 573 RTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGAD 629
+R+R P + +I F S K I +E + + LL+ KGA
Sbjct: 475 -------MRDRNP-------KIVEI----PFNSTNKYQLSIHENEKSSESRYLLVMKGAP 516
Query: 630 SIIFDRLSK---NGR---MYEEATTKLL---NEYGEAGLRTLALAYKQLDESEYSAWNSE 680
I DR S NG + E+ E G G R L + L E +Y
Sbjct: 517 ERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKY------ 570
Query: 681 FQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740
D + + DL VG A+ D + VP + K AG+K+ ++
Sbjct: 571 ----NEGYPFDAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMV 621
Query: 741 TGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKL 800
TGD TA I K + I + ++++ A +
Sbjct: 622 TGDHPITAKAIA----------KGVGIISEGNETIEDIAAR-------------LNIPIG 658
Query: 801 ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVIC-CRVSPKQKALVTRLVKE- 858
+ +P A A ++ G L D+ L + + I R SP+QK +V+
Sbjct: 659 QVNPRDAKACVVHGSDL-----KDLSTEVLDDILHYHTEIVFARTSPQQK---LIIVEGC 710
Query: 859 -GTGKTTLAIGDGANDVGMIQEADIGI--GISG 888
G GDG ND +++ADIG+ GISG
Sbjct: 711 QRQGAIVAVTGDGVNDSPALKKADIGVAMGISG 743
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 7e-05
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSE 449
E LG TI SDKTGTLT N+M + +E
Sbjct: 370 ETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE 409
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 5e-21
Identities = 51/348 (14%), Positives = 106/348 (30%), Gaps = 107/348 (30%)
Query: 541 NEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNL 600
E + +AA + + + ++
Sbjct: 367 RVENQDAI-------DAAMVGMLADPKE----------------------ARAGIREVHF 397
Query: 601 LDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLR 660
L F KR ++ D G + KGA I + L+K + ++++Y E GLR
Sbjct: 398 LPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILE-LAKASNDLSKKVLSIIDKYAERGLR 456
Query: 661 TLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQ 720
+LA+A + + E + VG + D +
Sbjct: 457 SLAVARQVVPEKT--------------------------KESPGAPWEFVGLLPLFDPPR 490
Query: 721 KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAK 780
+ I + G+ + ++TGD++ G +++
Sbjct: 491 HDSAETIRRALNLGVNVKMITGDQLAIGKETG----------RRL--------------- 525
Query: 781 EAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVI 840
+ + +S ++ +D ++ + +E A
Sbjct: 526 -----GMGTNMYPSSALLGTHKD-------------------ANLASIPVEELIEKADGF 561
Query: 841 CCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG 888
V P+ K + + ++E GDG ND +++ADIGI ++
Sbjct: 562 -AGVFPEHKYEIVKKLQE-RKHIVGMTGDGVNDAPALKKADIGIAVAD 607
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 7e-07
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQN 466
EE+ +D + SDKTGTLT N++ K V GV +V L AA MA +E Q+
Sbjct: 318 EEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA--MASRVENQD 372
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 2e-20
Identities = 55/309 (17%), Positives = 99/309 (32%), Gaps = 89/309 (28%)
Query: 583 RYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRM 642
+Y P+ + V ++K+L F K++ +V G+ + KGA + + ++ +
Sbjct: 431 KYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPI 490
Query: 643 YEEATTKLLN---EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHV 699
EE N E+ G R+L +A K+
Sbjct: 491 PEEVDQAYKNKVAEFATRGFRSLGVARKR------------------------------- 519
Query: 700 SDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759
E ++G D + + + + GL I +LTGD + A
Sbjct: 520 ---GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIA----------- 565
Query: 760 QGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819
++ + + L + I + L
Sbjct: 566 ---RETS-----------------------------RQLGLGTN-------IYNAERLGL 586
Query: 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQE 879
DM + VE A V P+ K V ++++ G GDG ND +++
Sbjct: 587 GGGGDMPGSEVYDFVEAADGFA-EVFPQHKYNVVEILQQR-GYLVAMTGDGVNDAPSLKK 644
Query: 880 ADIGIGISG 888
AD GI + G
Sbjct: 645 ADTGIAVEG 653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 2e-05
Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 24/109 (22%)
Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRES 469
E L V+ + SDKTGTLT N++ GV P ++ L A
Sbjct: 367 ESLAGVEILCSDKTGTLTKNKLSLHDPYTVA---GVDPEDLMLTAC-------------L 410
Query: 470 ANAKHKNSGSEIELETVITSNDGNDFKRRIKG--------FNFEDSRLM 510
A ++ K I+ + + K + F+ +++
Sbjct: 411 AASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVV 459
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 8e-16
Identities = 38/179 (21%), Positives = 55/179 (30%), Gaps = 65/179 (36%)
Query: 545 GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLD-- 602
NL + A L E + R+ +D
Sbjct: 33 KNLL-------DTAVLEGTDEESARS---------LASRWQ--------------KIDEI 62
Query: 603 -FTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSK---NGR---MYEEATTKLL---N 652
F +R+RMSV+V + L+CKGA I + S+ NG + + K+ +
Sbjct: 63 PFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTD 122
Query: 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVG 711
GLR +A+A K L E E DLIL G
Sbjct: 123 TLNRQGLRVVAVATKYLPARE-----------------------GDYQRADESDLILEG 158
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.2 bits (150), Expect = 7e-10
Identities = 84/490 (17%), Positives = 158/490 (32%), Gaps = 124/490 (25%)
Query: 2 TRGRIRAKLRRSQLYTFACLRPHVNET-EGSVQGC------PRVIYCNQPHMHKKRPLK- 53
+R + KLR++ L LRP N +G V G V C + K K
Sbjct: 132 SRLQPYLKLRQA-LLE---LRPAKNVLIDG-VLGSGKTWVALDV--CLSYKVQCKMDFKI 184
Query: 54 YCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVV 113
+ +++ N P+ + E + + I + + L I
Sbjct: 185 F---WLNLKNCNS----PETVLEMLQ---KLLYQIDPNWTSRSDHSSNI-----KLRI-- 227
Query: 114 GVSMAKEALEDW-RRFMQDKEVNARKVSVHVGNGVFSYKPWE------KI-------QVG 159
+++ RR ++ K + + V V + K W KI QV
Sbjct: 228 ------HSIQAELRRLLKSKP---YENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT 278
Query: 160 DIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGE-TNLKVK---RAMEATSPLNED- 214
D + L S + E +L + + + + R + T+P
Sbjct: 279 DFLSAATTTHIS--LDHHSMTLTPD----EVKSLLLKYLDCRPQDLPREVLTTNPRRLSI 332
Query: 215 --EAFKEFTGT------VKCENPNPSLYTFVGNIEYD--RELY---AIDPSQILLRDSKL 261
E+ ++ T V C+ + + + +E R+++ ++ P + +
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP-----SAHI 387
Query: 262 RNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFA 321
+ S+I+ + K S +EK+ + + +I + + + +A
Sbjct: 388 --PTILL-SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA 444
Query: 322 V--KI--NYQTPQ---WWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGY-LIPISLYV 373
+ I +Y P+ L P D YF +H+ G+ L I
Sbjct: 445 LHRSIVDHYNIPKTFDSDDLIPPYLDQYF---------YSHI-------GHHLKNIEHPE 488
Query: 374 SIEIVK--FLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDT---ILSDKTGT--- 425
+ + + FL F+ Q I A S LN L Q+ + D
Sbjct: 489 RMTLFRMVFLDFRFLEQKIR----HDSTAWNASGSILN-TLQQLKFYKPYICDNDPKYER 543
Query: 426 LTCNQMDFLK 435
L +DFL
Sbjct: 544 LVNAILDFLP 553
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.6 bits (133), Expect = 8e-08
Identities = 97/717 (13%), Positives = 216/717 (30%), Gaps = 225/717 (31%)
Query: 24 HVNETEGSVQ-GCPRVIYCNQPHMHKKRPLKYCTNY----ISTTKYNFFSYFPKALFEQF 78
H++ G Q ++ + K + +S + +
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI-------DHIIMSK 58
Query: 79 NRVANIYFLIAALLS---------------------VTPLS------------------- 98
+ V+ L LLS ++P+
Sbjct: 59 DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118
Query: 99 ------PFSP--VSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVH--VGNGVF 148
F+ VS L P ++AL + R A+ V + +G+G
Sbjct: 119 LYNDNQVFAKYNVSRLQP------YLKLRQALLELRP--------AKNVLIDGVLGSG-- 162
Query: 149 SYKPWEKIQVGDIVKVEKDQFFPADLLFLS----SSYEDGICYVETMNLDGETNLKVKRA 204
K W + V KV+ + +L+ +S E + ++ + + N +
Sbjct: 163 --KTWVALDVCLSYKVQ--CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 205 MEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPS-QILL--RDSKL 261
+ L E +K P + + N++ + A + S +ILL R ++
Sbjct: 219 HSSNIKLRIHSIQAELRRLLK-SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV 277
Query: 262 RNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGI-EKKMDKIIFILFAILVLIS--LISSI 318
+ + S T H S + T +P + + K +D L ++ + +S I
Sbjct: 278 TD----FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII 333
Query: 319 GFAVKINYQTPQWW--YLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIE 376
+++ T W K T + I S+
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTI---------------------------IE--SSLN 364
Query: 377 IVKF--LQAIFINQDISMYDDESGIPAQART---SNLNEELGQVDTILSDKTGTLTCNQM 431
+++ + +F +S++ + IP + ++ + V +++ ++
Sbjct: 365 VLEPAEYRKMF--DRLSVFPPSAHIPTILLSLIWFDVIKS--DVMVVVNK------LHKY 414
Query: 432 DFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSND 491
++ + + PS + ++L+ + A H+ +++
Sbjct: 415 SLVEKQPKESTISI-PS---------IYLELKVKLENEY-ALHR---------SIV---- 450
Query: 492 GNDFKRRIKGFNFEDSRL--MDGNW-------LKEPNVDTLLLFFRIL---------AIC 533
D K F+ +D +D + LK + FR++ I
Sbjct: 451 --DHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIR 508
Query: 534 HTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593
H + + A +FY+ +I + P +
Sbjct: 509 HDSTA----------WNASGSILNTLQQ------LKFYKP-----YICDNDP------KY 541
Query: 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKL 650
E + +LDF K + L+ K D + ++++ ++EEA ++
Sbjct: 542 ERLVNAILDFLPKI-----------EENLICSKYTDLLRIALMAEDEAIFEEAHKQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 4e-05
Identities = 53/401 (13%), Positives = 119/401 (29%), Gaps = 108/401 (26%)
Query: 494 DFKRRIKGFNFED-------SRLMDGNWLKEPNVD--TLLLFFRILAICHTAIPELNEET 544
F + +D +D + + + TL LF+ +L+ + + EE
Sbjct: 28 AFVDNFDCKDVQDMPKSILSKEEID-HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV 86
Query: 545 GNLTYEAESPDEAAFLVAA----------REFGFEFYR-RTQSSVFIRERYPPKGQPVER 593
+ Y+ FL++ + R R + + + V R
Sbjct: 87 LRINYK--------FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN---QVFAKY--NVSR 133
Query: 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLC--KG-------ADSIIFDRLSK--NGRM 642
L L R+ ++ + +L+ G D + ++ + ++
Sbjct: 134 LQPYLKL------RQ---ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI 184
Query: 643 Y-----EEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLE 697
+ + + + L L Q+D +++ + K I + +
Sbjct: 185 FWLNLKNCNSPETV-------LEMLQKLLYQID-PNWTSRSDHSSNIKLRIHSIQAELRR 236
Query: 698 HVSDMMEKD--LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG--- 752
+ ++ L+L+ V++ + + KI + T K T
Sbjct: 237 LLKSKPYENCLLVLLN---VQN------AKAWNAFN-LSCKILLTTRFKQVTDFLSAATT 286
Query: 753 -------FACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMI-KLERDP 804
+ +L +K + + L+ +E + N +I + RD
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDC-RPQDLPREVLTTNPR-----RLSIIAESIRDG 340
Query: 805 HA-----------AYALIIEGKTLAYALEDDMKHHFLGLAV 834
A IIE +L + + F L+V
Sbjct: 341 LATWDNWKHVNCDKLTTIIE-SSLNVLEPAEYRKMFDRLSV 380
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 844 VSPKQKALVTRLVKEGTG-KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHD 900
K V +L+KE K + IGDGA D+ AD IG G Q V
Sbjct: 153 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAK 210
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 839 VICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGI 884
+ PK++++ + + +A GD ND M+ EA GI
Sbjct: 126 YQLRQKDPKRQSV---IAFKSLYYRVIAAGDSYNDTTMLSEAHAGI 168
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 864 TLAIGDGANDVGMIQEADIGIG 885
T+A+GDGAND+ M ++A + I
Sbjct: 162 TVAVGDGANDISMFKKAGLKIA 183
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 864 TLAIGDGANDVGMIQEADIGIG 885
TL +GDGAND+ M + A I I
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIA 182
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 10/47 (21%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 838 SVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGI 884
C K V + E + + IGD DV + +D+
Sbjct: 141 KGTCSNQCGCCKPSVIHELSE-PNQYIIMIGDSVTDVEAAKLSDLCF 186
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 864 TLAIGDGANDVGMIQEADIGIG 885
T+A+GDGAND+ M+ A +G+
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVA 285
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 6e-05
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 864 TLAIGDGANDVGMIQEADIGIG 885
+A GDGAND+ M++ A GI
Sbjct: 265 IIACGDGANDLPMLEHAGTGIA 286
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 7e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 864 TLAIGDGANDVGMIQEADIGIG 885
T+A+GDGAND+ M+ A +GI
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIA 363
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 928 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.85 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.87 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.82 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.81 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.75 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.71 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.62 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.02 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.02 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.0 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.95 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.91 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.88 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.86 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.85 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.85 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.81 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.81 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.77 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.73 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.72 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.7 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.69 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.68 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.68 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.65 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.6 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.59 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.57 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.54 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.53 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.5 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.48 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.46 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.43 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.42 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.39 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.39 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.38 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.37 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.34 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.32 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.31 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.24 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.24 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.17 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.17 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.12 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.12 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.07 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.05 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.05 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.02 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.02 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.02 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.99 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.98 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 97.98 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 97.97 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.94 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.85 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 97.85 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 97.82 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.77 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.75 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.75 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.73 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.65 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.63 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.6 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.56 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.54 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.53 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.52 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.47 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.47 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.46 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.41 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.4 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.37 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.36 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.34 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.33 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.33 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.33 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.31 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.29 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.29 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.28 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.27 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.25 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.25 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.23 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.17 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.15 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.15 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.06 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.04 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.04 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 96.98 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 96.93 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 96.77 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 96.72 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.71 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 96.7 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 96.66 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.61 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 96.6 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 96.46 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.34 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.32 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.25 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.23 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.15 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.12 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.09 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.88 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.78 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 95.78 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 95.66 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.64 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 95.56 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.34 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.32 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.21 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.13 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.94 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 94.63 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 94.63 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 94.61 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.51 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 94.07 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 93.6 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 93.57 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 93.3 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 92.92 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 92.54 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 92.05 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 91.03 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 90.71 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 89.96 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 88.61 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 86.37 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 86.01 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 84.64 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-90 Score=871.56 Aligned_cols=676 Identities=19% Similarity=0.198 Sum_probs=524.3
Q ss_pred ccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhccc--CC-------CCCCcchhhhHHHHHHHHHH
Q 002391 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LS-------PFSPVSMLLPLAIVVGVSMA 118 (928)
Q Consensus 48 ~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~--~~-------~~~~~~~~~~l~~vl~~~~~ 118 (928)
.+|+.+||.|.++.++...++ +.|++||.++++++++++++++++. +. ....+...++++++++++++
T Consensus 79 ~~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 155 (1034)
T 3ixz_A 79 AELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGC 155 (1034)
T ss_pred HHHHHhhCCCCCCCCCCCCHH---HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHH
Confidence 457889999999988876554 8899999999999999999888753 11 11234556677788899999
Q ss_pred HHHHHHHHHhhhhhhhcc---ceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCC
Q 002391 119 KEALEDWRRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDG 195 (928)
Q Consensus 119 ~~~~~d~~r~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtG 195 (928)
..+++++|..++.+.+++ .+++|+ |||++++|+|++|+|||||.|++||.||||++||++++ +.||||+|||
T Consensus 156 ~~~~qe~ka~~al~~L~~l~~~~a~Vi-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LTG 230 (1034)
T 3ixz_A 156 FGYYQEFKSTNIIASFKNLVPQQATVI-RDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLTG 230 (1034)
T ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEE-ECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecccCC
Confidence 999999999998776654 789999 89999999999999999999999999999999999665 7899999999
Q ss_pred CCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEec
Q 002391 196 ETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTG 275 (928)
Q Consensus 196 Es~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG 275 (928)
||.|+.|.+.... ..|++..|++++||.+.+ |.+.|+|++||
T Consensus 231 ES~pv~K~~~~~~-------------------------------------~~~~~~~n~~f~GT~v~~-G~~~~vVv~tG 272 (1034)
T 3ixz_A 231 ESEPQTRSPECTH-------------------------------------ESPLETRNIAFFSTMCLE-GTAQGLVVNTG 272 (1034)
T ss_pred CCCCeeccCCCcc-------------------------------------ccccccccceecceeEEe-ecceEEEEeeh
Confidence 9999999875422 012233444444444442 33999999999
Q ss_pred Ccceeee---cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhH
Q 002391 276 HDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (928)
Q Consensus 276 ~~Tki~~---~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (928)
.+|.+++ +....+.+++|+++.+++++.++..++++++++.++++.++.. .|
T Consensus 273 ~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~-------------------- 327 (1034)
T 3ixz_A 273 DRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGY-----TF-------------------- 327 (1034)
T ss_pred hhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----hH--------------------
Confidence 9996554 4556677889999999999999998888888877776544221 12
Q ss_pred HHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeE
Q 002391 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (928)
Q Consensus 353 ~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~ 432 (928)
...|.+++.+++.+||++||++++++..+++.++ +++++++|+++++|+||++++||||||||||+|+|+
T Consensus 328 ~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~ 397 (1034)
T 3ixz_A 328 LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMT 397 (1034)
T ss_pred HHHHHHHHHHHHheeccccHHHHHHHHHHHHHHH----------hhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEE
Confidence 3578889999999999999999999999999998 889999999999999999999999999999999999
Q ss_pred EEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhccc
Q 002391 433 FLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDG 512 (928)
Q Consensus 433 v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (928)
|.++++++..|.....+.. .+.
T Consensus 398 v~~~~~~~~~~~~~~~~~~------------------------------------------------~~~---------- 419 (1034)
T 3ixz_A 398 VSHLWFDNHIHSADTTEDQ------------------------------------------------SGQ---------- 419 (1034)
T ss_pred EEEEEECCccccccCcccc------------------------------------------------ccc----------
Confidence 9999998876543211100 000
Q ss_pred CCCCCCChHHHHHHHHHHhhccceeecccCCCC--ceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCC
Q 002391 513 NWLKEPNVDTLLLFFRILAICHTAIPELNEETG--NLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590 (928)
Q Consensus 513 ~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~--~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 590 (928)
...........++.++++||++......+.. .-....++|+|.|+++++...|.....
T Consensus 420 --~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~------------------ 479 (1034)
T 3ixz_A 420 --TFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG------------------ 479 (1034)
T ss_pred --ccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHH------------------
Confidence 0011234566889999999998765332211 123446899999999999987643211
Q ss_pred ceeEEEEEEeecCCCCCceeEEEEEcC---CCcEEEEEccchhhhHHhhcc---------cccccHHHHHHHHHHHHhcC
Q 002391 591 VEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSK---------NGRMYEEATTKLLNEYGEAG 658 (928)
Q Consensus 591 ~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~G 658 (928)
.+..|+.++.+||+|+||||+++++.+ ++++++|+||||+.|+++|+. ..+..++.+.+.+++|+.+|
T Consensus 480 ~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G 559 (1034)
T 3ixz_A 480 YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLG 559 (1034)
T ss_pred HHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcC
Confidence 246788999999999999999888754 378999999999999999974 12234667888999999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEE
Q 002391 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (928)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~ 738 (928)
+|||++|||.++.+++.+|... +++ ..+.+|+||+|+|+++++||+|++++++|++|+++||+||
T Consensus 560 ~RvLa~A~~~l~~~~~~~~~~~----------~~~-----~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vv 624 (1034)
T 3ixz_A 560 ERVLGFCQLYLSEKDYPPGYAF----------DVE-----AMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVI 624 (1034)
T ss_pred cHhheEeEEecChhhccccccc----------chh-----hhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEE
Confidence 9999999999998766544221 111 1245689999999999999999999999999999999999
Q ss_pred EEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhh
Q 002391 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (928)
Q Consensus 739 mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 818 (928)
|+|||++.||.++|+++||..++...+ ... . .. ................+++|..+.
T Consensus 625 miTGd~~~tA~~ia~~lgi~~~~~~~i----------~~~---~------~~----~~~~~~~~~~~~~~~~~~~g~~l~ 681 (1034)
T 3ixz_A 625 MVTGDHPITAKAIAASVGIISEGSETV----------EDI---A------AR----LRVPVDQVNRKDARACVINGMQLK 681 (1034)
T ss_pred EEeCCCHHHHHHHHHHcCCCCCCchHH----------HHH---H------Hh----hCccchhccccccceeEEecHhhh
Confidence 999999999999999999976432110 000 0 00 000000011223345788999888
Q ss_pred HhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhC
Q 002391 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSG 898 (928)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aa 898 (928)
...++++.+ ....+...+|||++|+||..+|+.+++ .|+.|+|||||.||++||+.||+||||+++....||++|
T Consensus 682 ~~~~~~l~~----~~~~~~~~v~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aA 756 (1034)
T 3ixz_A 682 DMDPSELVE----ALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAA 756 (1034)
T ss_pred hCCHHHHHH----HHHhCCceEEEecCHHHHHHHHHHHHH-cCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhc
Confidence 765554433 334456679999999999999999998 799999999999999999999999999755555699999
Q ss_pred ceeccccc----ccccccchhhHHH-HhHHhh
Q 002391 899 HDMRKCIQ----VFAFDIADCSLKI-AKFATF 925 (928)
Q Consensus 899 D~v~~~~~----~~~~~~~~~~~~~-i~~~~~ 925 (928)
|+|+...+ +.+++.||.+.++ .||++|
T Consensus 757 D~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~ 788 (1034)
T 3ixz_A 757 DMILLDDNFASIVTGVEQGRLIFDNLKKSIAY 788 (1034)
T ss_pred CEEeccCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998555 4588888885544 445544
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-92 Score=880.86 Aligned_cols=673 Identities=21% Similarity=0.229 Sum_probs=520.5
Q ss_pred ccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhcccC--C---C----CCCcchhhhHHHHHHHHHH
Q 002391 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPL--S---P----FSPVSMLLPLAIVVGVSMA 118 (928)
Q Consensus 48 ~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~~--~---~----~~~~~~~~~l~~vl~~~~~ 118 (928)
.+|+.+||.|.++.++...++ +.|++||.++++++++++++++++.. . . ...+...++++++++++++
T Consensus 74 ~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 150 (1028)
T 2zxe_A 74 KEILARDGPNSLTPPPTTPEW---IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGC 150 (1028)
T ss_dssp HHHHHHHCCSCCCCCCCCCHH---HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHH
Confidence 456789999999988654433 78999999999999999999988641 1 0 1123445667788899999
Q ss_pred HHHHHHHHHhhhhhhh---ccceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCC
Q 002391 119 KEALEDWRRFMQDKEV---NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDG 195 (928)
Q Consensus 119 ~~~~~d~~r~k~~~~~---n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtG 195 (928)
.+++++++..++.+.+ ...+++|+ |||++++|+|++|+|||||.|++||.|||||+|+++++ |+||||+|||
T Consensus 151 ~~~~qe~ka~~~~~~L~~l~~~~a~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LTG 225 (1028)
T 2zxe_A 151 FSYYQEAKSSRIMDSFKNMVPQQALVI-RDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLTG 225 (1028)
T ss_dssp HHHHHTCCCCCHHHHHHTTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeeEEE-ECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccCC
Confidence 9999999888876654 45789999 89999999999999999999999999999999999543 8999999999
Q ss_pred CCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEec
Q 002391 196 ETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTG 275 (928)
Q Consensus 196 Es~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG 275 (928)
||.|+.|.+++.. ..|++..|++++||.+.+ |+++|+|++||
T Consensus 226 ES~pv~K~~~~~~-------------------------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG 267 (1028)
T 2zxe_A 226 ESEPQTRSPEFSS-------------------------------------ENPLETRNIAFFSTNCVE-GTARGVVVYTG 267 (1028)
T ss_dssp CCSCEECCSSCCC-------------------------------------SSTTTCSSEECTTCEEEE-EEEEEEEEECG
T ss_pred CCcceecccCCCC-------------------------------------CCcccccceEEeCceEEc-ceEEEEEEEec
Confidence 9999999876432 115677899999999985 78999999999
Q ss_pred Ccceeee---cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhH
Q 002391 276 HDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (928)
Q Consensus 276 ~~Tki~~---~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (928)
.+|.+++ +...++.+++++++.+++++.+++++.++++++.++++.+. .. .|+
T Consensus 268 ~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~-~~----~~~------------------- 323 (1028)
T 2zxe_A 268 DRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL-GY----SWL------------------- 323 (1028)
T ss_dssp GGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC----CHH-------------------
T ss_pred cccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cC----cHH-------------------
Confidence 9997654 45567788999999999999999999998888887764432 11 232
Q ss_pred HHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeE
Q 002391 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (928)
Q Consensus 353 ~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~ 432 (928)
..+.+++.+++.+|||+||++++++..+++.++ +++++++|+++.+|+||++++||||||||||+|+|+
T Consensus 324 -~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~ 392 (1028)
T 2zxe_A 324 -EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMT 392 (1028)
T ss_dssp -HHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCE
T ss_pred -HHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH----------hhCCceeccchHhhhhcCceEEeccCCCCCCCCeEE
Confidence 456677888899999999999999999999988 789999999999999999999999999999999999
Q ss_pred EEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhccc
Q 002391 433 FLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDG 512 (928)
Q Consensus 433 v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (928)
|.++++++..|.....+. ..+.
T Consensus 393 v~~~~~~~~~~~~~~~~~------------------------------------------------~~~~---------- 414 (1028)
T 2zxe_A 393 VAHMWFDNQIHEADTTEN------------------------------------------------QSGA---------- 414 (1028)
T ss_dssp EEEEEETTEEEECCCCTT------------------------------------------------CCSC----------
T ss_pred EEEEEECCeeeeccCCCC------------------------------------------------cccc----------
Confidence 999998876653221000 0000
Q ss_pred CCCCCCChHHHHHHHHHHhhccceeecccCCCCc--eEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCC
Q 002391 513 NWLKEPNVDTLLLFFRILAICHTAIPELNEETGN--LTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590 (928)
Q Consensus 513 ~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~--~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 590 (928)
.....+....+++.++++||++..+...+... -.+..++|+|.||+++|+..|.....
T Consensus 415 --~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~------------------ 474 (1028)
T 2zxe_A 415 --AFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQG------------------ 474 (1028)
T ss_dssp --CCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHH------------------
T ss_pred --ccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHH------------------
Confidence 00112345668889999999987753322111 11236899999999999886421100
Q ss_pred ceeEEEEEEeecCCCCCceeEEEEEcC---CCcEEEEEccchhhhHHhhccc---------ccccHHHHHHHHHHHHhcC
Q 002391 591 VEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGEAG 658 (928)
Q Consensus 591 ~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~G 658 (928)
.+..|++++.+||+|.||||+++++.+ ++++++|+||||+.|+++|+.. ++..++.+.+++++|+.+|
T Consensus 475 ~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G 554 (1028)
T 2zxe_A 475 MRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLG 554 (1028)
T ss_dssp HHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcC
Confidence 134578899999999999999999974 5789999999999999999751 1234567888899999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEE
Q 002391 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (928)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~ 738 (928)
+|||++|||+++++++.++.. .+++ ..+.+|+|++|+|+++++|++|++++++|++|+++||+||
T Consensus 555 ~RvL~~A~~~l~~~~~~~~~~----------~~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~ 619 (1028)
T 2zxe_A 555 ERVLGFCHFALPEDKYNEGYP----------FDAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVI 619 (1028)
T ss_dssp CEEEEEEEEECCSTTSCTTCC----------CCTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEE
T ss_pred CEEEEEEEEecCccccccccc----------cchh-----hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEE
Confidence 999999999997654322100 0110 0123578999999999999999999999999999999999
Q ss_pred EEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhh
Q 002391 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (928)
Q Consensus 739 mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 818 (928)
|+|||+..||.++|++|||...+...+ .+ .... ....+ ...........+++|..+.
T Consensus 620 miTGD~~~tA~~ia~~lgi~~~~~~~i----------~~---------~~~~---~~~~~-~~~~~~~~~~~vi~G~~l~ 676 (1028)
T 2zxe_A 620 MVTGDHPITAKAIAKGVGIISEGNETI----------ED---------IAAR---LNIPI-GQVNPRDAKACVVHGSDLK 676 (1028)
T ss_dssp EECSSCHHHHHHHHHHHTSSCTTCCCH----------HH---------HHHH---TTCCG-GGSCGGGCCEEEEEHHHHT
T ss_pred EECCCCHHHHHHHHHHcCCCCCCchhH----------HH---------HHhh---cCcch-hhccccccceEEEEcHHhh
Confidence 999999999999999999986543211 00 0000 00000 0011122346789999988
Q ss_pred HhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhC
Q 002391 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSG 898 (928)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aa 898 (928)
.+.++++.+ +...+..++|||++|+||..+|+.+++ .|+.|+|+|||.||++||++|||||||+.+....|+++|
T Consensus 677 ~~~~~~l~~----~~~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aA 751 (1028)
T 2zxe_A 677 DLSTEVLDD----ILHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAA 751 (1028)
T ss_dssp TCCHHHHHH----HHHHCSEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHC
T ss_pred hCCHHHHHH----HHhhCCcEEEEEcCHHHHHHHHHHHHh-CCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhc
Confidence 765544433 344556689999999999999999998 689999999999999999999999999632333389999
Q ss_pred ceeccccc----ccccccchhhHHHHhH
Q 002391 899 HDMRKCIQ----VFAFDIADCSLKIAKF 922 (928)
Q Consensus 899 D~v~~~~~----~~~~~~~~~~~~~i~~ 922 (928)
|+++..++ +.+++.+|.+.++|+.
T Consensus 752 D~Vl~~~~~~~I~~~i~~gR~i~~ni~k 779 (1028)
T 2zxe_A 752 DMILLDDNFASIVTGVEEGRLIFDNLKK 779 (1028)
T ss_dssp SEEETTCCTHHHHHHHHHHHHHHHHHHH
T ss_pred CEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99987543 3488999997777663
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-89 Score=859.82 Aligned_cols=695 Identities=21% Similarity=0.217 Sum_probs=510.3
Q ss_pred cccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhccc-CCCC------CCcchhhhHHHHHHHHHHH
Q 002391 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPF------SPVSMLLPLAIVVGVSMAK 119 (928)
Q Consensus 47 ~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~-~~~~------~~~~~~~~l~~vl~~~~~~ 119 (928)
..+|+.+||.|.++.+++..++ +.|++||+++++++|++++++++++ +.+. .|+.. +.++++++++++.
T Consensus 30 ~~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~i 105 (995)
T 3ar4_A 30 VKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEP-FVILLILIANAIV 105 (995)
T ss_dssp HHHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHh-HHhhHHHHHHHHH
Confidence 3457788999999998765443 8999999999999999999999876 3221 22222 3344555677777
Q ss_pred HHHHHHHHhhhhh---hhccceEEEEeCCce--EEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCC
Q 002391 120 EALEDWRRFMQDK---EVNARKVSVHVGNGV--FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (928)
Q Consensus 120 ~~~~d~~r~k~~~---~~n~~~~~V~~r~g~--~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~Lt 194 (928)
..+++++..++.+ .+...+++|+ |||. +++|+|++|+|||||.|++||.|||||+|++.+. +.|+||||+||
T Consensus 106 ~~~qe~~a~~al~~L~~~~~~~a~V~-R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LT 182 (995)
T 3ar4_A 106 GVWQERNAENAIEALKEYEPEMGKVY-RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILT 182 (995)
T ss_dssp HHHHHHHCCCHHHHHGGGSCSEEEEE-BTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCeEEEE-eCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEee--ceEEEEccccc
Confidence 8888887766544 4456789999 7876 6999999999999999999999999999987544 56999999999
Q ss_pred CCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEe
Q 002391 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFT 274 (928)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~t 274 (928)
|||.|+.|.+++... + ...+.+..|++++||.+.+ |+++|+|++|
T Consensus 183 GES~pv~K~~~~~~~-------------------~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~t 227 (995)
T 3ar4_A 183 GESVSVIKHTEPVPD-------------------P---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATT 227 (995)
T ss_dssp CCCSCEEECCSCCCC-------------------T---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEEC
T ss_pred CCCcceeccccccCC-------------------c---------------ccCcccccceEecCCEEEc-ceEEEEEEEc
Confidence 999999999864320 0 1124577899999999996 7899999999
Q ss_pred cCcceeeec---CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc-CCCccccCCCCCccccCCCCCch
Q 002391 275 GHDSKVMQN---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQ-TPQWWYLKPKETDVYFNPGKPLV 350 (928)
Q Consensus 275 G~~Tki~~~---~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 350 (928)
|.+|++++. ...++.+++|+|+.+++++.+++++++++|++.++++..+.... ....|+ .
T Consensus 228 G~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~ 291 (995)
T 3ar4_A 228 GVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWI----------------R 291 (995)
T ss_dssp GGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHH----------------H
T ss_pred CcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHH----------------H
Confidence 999977554 45677889999999999999999988888887766543211100 000121 1
Q ss_pred hHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeece
Q 002391 351 PGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQ 430 (928)
Q Consensus 351 ~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~ 430 (928)
.....|..++++++.+|||+||++++++..+++.++ +++++++|+++.+|+||++++||||||||||+|+
T Consensus 292 ~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~ 361 (995)
T 3ar4_A 292 GAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 361 (995)
T ss_dssp HHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCC
T ss_pred HHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHh----------ccCCcEeccchhhhhhcCceEEEecCCCCcccCc
Confidence 223467788999999999999999999999999888 7899999999999999999999999999999999
Q ss_pred eEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhc
Q 002391 431 MDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLM 510 (928)
Q Consensus 431 m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (928)
|+|.++++.+..++..... ......+ .+.++ .+ .. ..
T Consensus 362 m~v~~~~~~~~~~~~~~~~-----------------------------~~~~~~~-------~~~~p--~~-~~----~~ 398 (995)
T 3ar4_A 362 MSVCKMFIIDKVDGDFCSL-----------------------------NEFSITG-------STYAP--EG-EV----LK 398 (995)
T ss_dssp CEEEEEEEEEEEETTEEEE-----------------------------EEEEECC-------SSSSS--CC-CE----EE
T ss_pred eEEEEEEecCcccCccccc-----------------------------ceeeccC-------CCcCC--cc-cc----cc
Confidence 9999998865433210000 0000000 00000 00 00 00
Q ss_pred ccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCC
Q 002391 511 DGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590 (928)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 590 (928)
.+..........+.+++.++++||++....++..+. ....++|+|.||+.+|+++|+ +... ...+...+........
T Consensus 399 ~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~-~~~~g~p~E~Al~~~a~~~g~-~~~~-~~~i~~~~~~~~~~~~ 475 (995)
T 3ar4_A 399 NDKPIRSGQFDGLVELATICALCNDSSLDFNETKGV-YEKVGEATETALTTLVEKMNV-FNTE-VRNLSKVERANACNSV 475 (995)
T ss_dssp TTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTE-EEEESCHHHHHHHHHHHHHCT-TCCC-CTTSCTTTSTTHHHHH
T ss_pred ccccccccccHHHHHHHHHHHHcCCCcccccCCCCc-eeecCCccHHHHHHHHHHcCC-cccc-ccccccccccccchhh
Confidence 000011122345778999999999987654332222 223589999999999999887 2111 0000000000000000
Q ss_pred ceeEEEEEEeecCCCCCceeEEEEEcCCC-----cEEEEEccchhhhHHhhccc---------ccccHHHHHHHHHHH--
Q 002391 591 VEREFKILNLLDFTSKRKRMSVIVRDEDG-----QILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEY-- 654 (928)
Q Consensus 591 ~~~~~~il~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~-- 654 (928)
.+..|++++.+||+|+||||||+++.++| .+.+|+||||+.|+++|+.. .+..++.+.+++++|
T Consensus 476 ~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 555 (995)
T 3ar4_A 476 IRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGT 555 (995)
T ss_dssp HHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHH
T ss_pred hhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHh
Confidence 13579999999999999999999998766 68999999999999999752 123456788889999
Q ss_pred HhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcC
Q 002391 655 GEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAG 734 (928)
Q Consensus 655 ~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aG 734 (928)
+.+|+|||++|||+++..+. ...+ .+. ...+.+|+|++|+|+++++|++|++++++|+.|+++|
T Consensus 556 a~~GlRvLa~A~k~~~~~~~----------~~~~-~~~-----~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~G 619 (995)
T 3ar4_A 556 GRDTLRCLALATRDTPPKRE----------EMVL-DDS-----SRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAG 619 (995)
T ss_dssp STTCCEEEEEEEESSCCCGG----------GCCT-TCG-----GGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTT
T ss_pred hhccceEEEEEEEecCcccc----------cccc-ccc-----hhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcC
Confidence 99999999999999864210 0001 010 1235678999999999999999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcC
Q 002391 735 LKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEG 814 (928)
Q Consensus 735 Ikv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G 814 (928)
|++||+|||+..||.++|++|||...+..+ . ..+++|
T Consensus 620 i~v~miTGD~~~ta~~ia~~lgi~~~~~~i------~-------------------------------------~~~~~g 656 (995)
T 3ar4_A 620 IRVIMITGDNKGTAIAICRRIGIFGENEEV------A-------------------------------------DRAYTG 656 (995)
T ss_dssp CEEEEEESSCHHHHHHHHHHHTSSCTTCCC------T-------------------------------------TTEEEH
T ss_pred CEEEEECCCCHHHHHHHHHHcCcCCCCCcc------c-------------------------------------ceEEEc
Confidence 999999999999999999999997543210 0 015667
Q ss_pred chhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHH
Q 002391 815 KTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQI 894 (928)
Q Consensus 815 ~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a 894 (928)
..+..+.++++.+.+. +..+|||++|+||..+|+.+++ .|+.|+|+|||.||++||++||+||||+ .....|
T Consensus 657 ~~~~~l~~~~~~~~~~------~~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~a 728 (995)
T 3ar4_A 657 REFDDLPLAEQREACR------RACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVA 728 (995)
T ss_dssp HHHHTSCHHHHHHHHH------HCCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHHHHSTEEEEET-TSCHHH
T ss_pred hhhhhCCHHHHHHHHh------hCcEEEEeCHHHHHHHHHHHHH-CCCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHHH
Confidence 6666544433333222 3569999999999999999998 6899999999999999999999999995 322238
Q ss_pred HHhCceeccccc----ccccccchhhHHHHhH
Q 002391 895 VLSGHDMRKCIQ----VFAFDIADCSLKIAKF 922 (928)
Q Consensus 895 ~~aaD~v~~~~~----~~~~~~~~~~~~~i~~ 922 (928)
+++||+++..++ +.++++||++.++|+.
T Consensus 729 k~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k 760 (995)
T 3ar4_A 729 KTASEMVLADDNFSTIVAAVEEGRAIYNNMKQ 760 (995)
T ss_dssp HHTCSEEETTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCEEECCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999987544 3378999997666653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-87 Score=813.82 Aligned_cols=585 Identities=19% Similarity=0.211 Sum_probs=465.7
Q ss_pred ccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 002391 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127 (928)
Q Consensus 48 ~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~~~~~~~~~~~~~l~~vl~~~~~~~~~~d~~r 127 (928)
.+|+.+||.|.++.+++++| +.|++||..+++++++++++++++. ..|... ..++++++++++.+++++++.
T Consensus 94 ~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~---g~~~~~-~~i~~vv~i~~~i~~~qe~~a 165 (920)
T 1mhs_A 94 VQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGL---EDWVDF-GVICGLLLLNAVVGFVQEFQA 165 (920)
T ss_dssp HHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTC---SCSSHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHH---HhHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 44677899999999998877 6788999999999999999998873 344444 445677788999999999999
Q ss_pred hhhhhhhcc---ceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcceeeec
Q 002391 128 FMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRA 204 (928)
Q Consensus 128 ~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~ 204 (928)
.++.+.+++ .+++|+ |||++++|++++|+|||||.|++||.|||||+|++++ +.+.||||+|||||.|+.|.+
T Consensus 166 ~~a~~~L~~l~~~~a~V~-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~---~~l~VDES~LTGES~PV~K~~ 241 (920)
T 1mhs_A 166 GSIVDELKKTLALKAVVL-RDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDD---AFLQVDQSALTGESLAVDKHK 241 (920)
T ss_dssp HHHHHTTTTCCCSSCEEE-CSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEES---SCCEEBCTTTSSCCCCEECCS
T ss_pred HHHHHHhhccCCCEEEEE-ECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecC---ceeeeeccccCCCCcceEecC
Confidence 998777664 789999 8999999999999999999999999999999999954 226999999999999999987
Q ss_pred ccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcceeeecC
Q 002391 205 MEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNA 284 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~~~~ 284 (928)
++.. |+||++.+|. +.++|++||.+|.+++..
T Consensus 242 gd~v---------------------------~sGT~v~~G~---------------------~~~~V~~tG~~T~~g~I~ 273 (920)
T 1mhs_A 242 GDQV---------------------------FASSAVKRGE---------------------AFVVITATGDNTFVGRAA 273 (920)
T ss_dssp SCEE---------------------------CSCBCCSCCC---------------------EEEEEEECSTTCSTTTTT
T ss_pred CCee---------------------------ecCceEecce---------------------EEEEEEEeCCcCHHHHHH
Confidence 6433 6777766666 999999999999877654
Q ss_pred ---CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHH
Q 002391 285 ---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALI 361 (928)
Q Consensus 285 ---~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 361 (928)
..++.+++++++.++++..++++++++++++.++.++ +.. ......|.++++
T Consensus 274 ~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~-----------~~~--------------~~~~~~l~~av~ 328 (920)
T 1mhs_A 274 ALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSF-----------YRS--------------NPIVQILEFTLA 328 (920)
T ss_dssp SSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----------TTT--------------CCHHHHHHHHHH
T ss_pred HHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------hcC--------------CcHHHHHHHHHH
Confidence 4566778999999999999888777766655543221 100 012357778999
Q ss_pred HhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEEEEcCc
Q 002391 362 LYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGT 441 (928)
Q Consensus 362 ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~i~~~ 441 (928)
+++.+|||+|+++++++..+++.++ +++++++|+++.+|+||++++||||||||||+|+|+|.+++..+.
T Consensus 329 llV~aiP~aLp~~vti~la~g~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g 398 (920)
T 1mhs_A 329 ITIIGVPVGLPAVVTTTMAVGAAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG 398 (920)
T ss_dssp HHHHHSCCCHHHHHHHHHHHHHHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC
T ss_pred HHHHhCchhHHHHHHHHHHHHHHHH----------HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC
Confidence 9999999999999999999999988 788999999999999999999999999999999999987643110
Q ss_pred ccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCCCCCChH
Q 002391 442 AYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVD 521 (928)
Q Consensus 442 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (928)
+ .+
T Consensus 399 -~-------------------------------------------------------------------------~~--- 401 (920)
T 1mhs_A 399 -V-------------------------------------------------------------------------DP--- 401 (920)
T ss_dssp -C-------------------------------------------------------------------------CC---
T ss_pred -C-------------------------------------------------------------------------CH---
Confidence 0 00
Q ss_pred HHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEee
Q 002391 522 TLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLL 601 (928)
Q Consensus 522 ~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~ 601 (928)
.+++.+.++|+.... ..+||+|.|+++++++.+..- .....|++++.+
T Consensus 402 --~~ll~~a~l~~~~~~-----------~~~~P~e~Al~~~~~~~~~~~-------------------~~~~~~~~~~~~ 449 (920)
T 1mhs_A 402 --EDLMLTACLAASRKK-----------KGIDAIDKAFLKSLKYYPRAK-------------------SVLSKYKVLQFH 449 (920)
T ss_dssp --THHHHHHHHSCCCSS-----------CSCCSHHHHHHHHHHHSSSCC-------------------GGGSCCCEEEEE
T ss_pred --HHHHHHHHHhcCCcc-----------cCCChHHHHHHHHHHhcccch-------------------hhccccceeEEe
Confidence 034456677765311 024999999999998866310 013457889999
Q ss_pred cCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhccc---ccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHH
Q 002391 602 DFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---GRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWN 678 (928)
Q Consensus 602 ~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~ 678 (928)
||+|.||||+++++.++|+.++|+||||+.|+++|... .+..++.+.+++++|+.+|+||+++|+|..
T Consensus 450 pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~--------- 520 (920)
T 1mhs_A 450 PFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG--------- 520 (920)
T ss_dssp EEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS---------
T ss_pred eccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc---------
Confidence 99999999999999888888999999999999999752 223456778889999999999999998731
Q ss_pred HHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 679 SEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 679 ~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
|.+++|+|+++++|++|++++++|+.|+++||++||+|||++.||.+||+++||.
T Consensus 521 -------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~ 575 (920)
T 1mhs_A 521 -------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLG 575 (920)
T ss_dssp -------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred -------------------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999999999999999999999999999996
Q ss_pred ccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCe
Q 002391 759 RQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECAS 838 (928)
Q Consensus 759 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~ 838 (928)
.... +... ++++|.. .+.++++ .+.. .+.
T Consensus 576 ~~~~-----~~~~--------------------------------------~~~~g~~--~~~~~el----~~~~--~~~ 604 (920)
T 1mhs_A 576 TNIY-----NAER--------------------------------------LGLGGGG--DMPGSEV----YDFV--EAA 604 (920)
T ss_dssp CSCC-----CSSS--------------------------------------SSSCBCC--CGGGGGG----GTTT--TTT
T ss_pred cccc-----Cccc--------------------------------------eeecCcc--cCCHHHH----HHHH--hhC
Confidence 3210 0000 0111110 0001111 1111 124
Q ss_pred eEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc----ccccccch
Q 002391 839 VICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ----VFAFDIAD 914 (928)
Q Consensus 839 ~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~----~~~~~~~~ 914 (928)
.+|+|++|+||..+|+.+++ .|+.|+|+|||.||+|||++|||||||++. ...|+++||+++..++ +.++++||
T Consensus 605 ~V~arv~P~~K~~iV~~Lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~g-td~ak~aADiVl~~~~~~~I~~ai~~gR 682 (920)
T 1mhs_A 605 DGFAEVFPQHKYNVVEILQQ-RGYLVAMTGDGVNDAPSLKKADTGIAVEGS-SDAARSAADIVFLAPGLGAIIDALKTSR 682 (920)
T ss_dssp SCEESCCSTHHHHHHHHHHT-TTCCCEECCCCGGGHHHHHHSSEEEEETTS-CHHHHHSSSEEESSCCSHHHHHHHHHHH
T ss_pred eEEEEeCHHHHHHHHHHHHh-CCCeEEEEcCCcccHHHHHhCCcCcccccc-cHHHHHhcCeEEcCCCHHHHHHHHHHHH
Confidence 58999999999999999998 699999999999999999999999999743 2338999999987555 34899999
Q ss_pred hhHHHHhHH
Q 002391 915 CSLKIAKFA 923 (928)
Q Consensus 915 ~~~~~i~~~ 923 (928)
++.++|+.+
T Consensus 683 ~~~~ni~k~ 691 (920)
T 1mhs_A 683 QIFHRMYAY 691 (920)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 977777643
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-86 Score=808.98 Aligned_cols=594 Identities=18% Similarity=0.187 Sum_probs=458.0
Q ss_pred cccCCCCCCCceeecCCCcchhhhHHHHHHHHhhHHHHHHHHHHHHhcccCC----CCCCcchhhhHHHHHHHHHHHHHH
Q 002391 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLS----PFSPVSMLLPLAIVVGVSMAKEAL 122 (928)
Q Consensus 47 ~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~~~~~l~~~il~~i~~~----~~~~~~~~~~l~~vl~~~~~~~~~ 122 (928)
..+|+.+||.|.++.+++++| +.|++||.+|++++++++++++++... +..|+..+ .++++++++.+.+++
T Consensus 38 ~~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~-~I~~~v~i~~~l~~~ 112 (885)
T 3b8c_A 38 GEDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFV-GIICLLVINSTISFI 112 (885)
T ss_dssp HHHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHH-HHHHHTTTTTTTTTT
T ss_pred HHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHH-HHHHHHHHHHHHHHH
Confidence 345788999999999987776 567789999999999999999987511 12454444 455666777778888
Q ss_pred HHHHHhhhhhhh---ccceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcc
Q 002391 123 EDWRRFMQDKEV---NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNL 199 (928)
Q Consensus 123 ~d~~r~k~~~~~---n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~ 199 (928)
++++..++.+.+ ...+++|+ |||++++|++++|+|||||.|++||.|||||+|+++++ ++||||+|||||.|
T Consensus 113 qe~ka~~al~~L~~~~~~~a~V~-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~P 187 (885)
T 3b8c_A 113 EENNAGNAAAALMAGLAPKTKVL-RDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLP 187 (885)
T ss_dssp TTTTTTTHHHHTTTSCSCCCCCC-CSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSC
T ss_pred HHHHHHHHHHHHhccCCCeEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcc
Confidence 888887776654 45789999 89999999999999999999999999999999999442 58999999999999
Q ss_pred eeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcce
Q 002391 200 KVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSK 279 (928)
Q Consensus 200 ~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tk 279 (928)
+.|.+++.. |+||.+.+|. ++++|++||.+|.
T Consensus 188 v~K~~g~~v---------------------------~~GT~v~~G~---------------------~~~~V~~tG~~T~ 219 (885)
T 3b8c_A 188 VTKHPGQEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTF 219 (885)
T ss_dssp CCBSSCCCC---------------------------CSCCCCCSCC---------------------CCCBCCSCTTTTT
T ss_pred eEecCCCcc---------------------------ccCeEEeeeE---------------------EEEEEEEcCcccH
Confidence 999886543 6777766666 9999999999998
Q ss_pred eeecCC--CCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHH
Q 002391 280 VMQNAT--TSPSKRSGIEKKMDKIIFILFA-ILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356 (928)
Q Consensus 280 i~~~~~--~~~~k~s~l~~~~n~~~~~~~~-~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (928)
+++... ....+++++|+.++++..++++ ++++++++.++.+.+. . ..|. ..|
T Consensus 220 ~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~--------------------~~~ 274 (885)
T 3b8c_A 220 FGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQ-R----RKYR--------------------DGI 274 (885)
T ss_dssp STTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTTT-C----SCST--------------------THH
T ss_pred HHHHHHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-c----CcHH--------------------HHH
Confidence 765433 1256789999999999877443 2222333222221110 0 0121 357
Q ss_pred HHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEE
Q 002391 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKC 436 (928)
Q Consensus 357 ~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~ 436 (928)
.+++++++.+|||+||++++++..+++.++ +++++++|+++.+|+||++++||||||||||+|+|+|.++
T Consensus 275 ~~~v~llv~aiP~aLp~~vti~la~g~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~ 344 (885)
T 3b8c_A 275 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKN 344 (885)
T ss_dssp HHHHHHTTTTCCSSTTTHHHHTTTHHHHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEE
Confidence 789999999999999999999999998888 8999999999999999999999999999999999998632
Q ss_pred EEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccCCCcccchhhcccCCCC
Q 002391 437 SVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLK 516 (928)
Q Consensus 437 ~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (928)
.+. .++.+.
T Consensus 345 ~~~--~~~~~~--------------------------------------------------------------------- 353 (885)
T 3b8c_A 345 LVE--VFCKGV--------------------------------------------------------------------- 353 (885)
T ss_dssp CCC--SSCSST---------------------------------------------------------------------
T ss_pred EEe--ccCCCC---------------------------------------------------------------------
Confidence 210 010000
Q ss_pred CCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEE
Q 002391 517 EPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFK 596 (928)
Q Consensus 517 ~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 596 (928)
...+++...++|+... ++||.|.|+++++.+.. . .+..|+
T Consensus 354 -----~~~~ll~~aa~~~~~~-------------~~~p~~~Al~~~~~~~~---------~-------------~~~~~~ 393 (885)
T 3b8c_A 354 -----EKDQVLLFAAMASRVE-------------NQDAIDAAMVGMLADPK---------E-------------ARAGIR 393 (885)
T ss_dssp -----THHHHHHHHHHHCCSS-------------SCCSHHHHHHHTTCCTT---------C-------------CCCSSC
T ss_pred -----CHHHHHHHHHHHhCCC-------------CCCchHHHHHHHhhchh---------h-------------HhhcCc
Confidence 0124566777887531 37999999998764210 0 123467
Q ss_pred EEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHH
Q 002391 597 ILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSA 676 (928)
Q Consensus 597 il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~ 676 (928)
+++.+||+|.||||+++++..+|+.++|+||||+.|+++|+... ..++.+.+++++|+.+|+||+++|+|++++.+
T Consensus 394 ~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~-~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~--- 469 (885)
T 3b8c_A 394 EVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASN-DLSKKVLSIIDKYAERGLRSLAVARQVVPEKT--- 469 (885)
T ss_dssp CBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCS-TTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS---
T ss_pred eeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCch-hhHHHHHHHHHHHHhCCCeEEEEEEecccccc---
Confidence 78899999999999999988788889999999999999997432 24456778899999999999999999886532
Q ss_pred HHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcc
Q 002391 677 WNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACS 756 (928)
Q Consensus 677 ~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~g 756 (928)
+ +..|++++|+|+++++|++|++++++|+.|+++||+++|+|||+..||.++|+++|
T Consensus 470 ---------------~--------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lG 526 (885)
T 3b8c_A 470 ---------------K--------ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 526 (885)
T ss_dssp ---------------S--------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTT
T ss_pred ---------------c--------cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhC
Confidence 1 24578999999999999999999999999999999999999999999999999999
Q ss_pred ccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhh-HHHHHHHHhhhhc
Q 002391 757 LLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALE-DDMKHHFLGLAVE 835 (928)
Q Consensus 757 ii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~-~~~~~~~~~~~~~ 835 (928)
|..+... .. +++|..++..+. .++.+...
T Consensus 527 i~~~~~~-----~~----------------------------------------~l~g~~~~~~~~~~~l~~~~~----- 556 (885)
T 3b8c_A 527 MGTNMYP-----SS----------------------------------------ALLGTHKDANLASIPVEELIE----- 556 (885)
T ss_dssp CTTCCST-----TS----------------------------------------SCCBGGGGTTSCCSCHHHHHH-----
T ss_pred CccccCC-----cc----------------------------------------eeeccccccccchhHHHHHHh-----
Confidence 9542100 00 112222221111 01111111
Q ss_pred cCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc----ccccc
Q 002391 836 CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ----VFAFD 911 (928)
Q Consensus 836 ~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~----~~~~~ 911 (928)
+..+|+|++|+||..+|+.+++ .|+.|+|+|||.||+|||++|||||||++ ....|+++||+++..++ +.+++
T Consensus 557 -~~~v~arv~P~~K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~-gtd~ak~aADivl~~~~~~~I~~ai~ 633 (885)
T 3b8c_A 557 -KADGFAGVFPEHKYEIVKKLQE-RKHIVGMTGDGVNDAPALKKADIGIAVAD-ATDAARGASDIVLTEPGLSVIISAVL 633 (885)
T ss_dssp -TSCCEECCCHHHHHHHHHHHHH-TTCCCCBCCCSSTTHHHHHHSSSCCCCSS-SHHHHGGGCSSCCSSCSHHHHTHHHH
T ss_pred -hCcEEEEECHHHHHHHHHHHHH-CCCeEEEEcCCchhHHHHHhCCEeEEeCC-ccHHHHHhcceeeccCchhHHHHHHH
Confidence 2358999999999999999998 69999999999999999999999999964 33338899999987655 34899
Q ss_pred cchhhHHHHhHHh
Q 002391 912 IADCSLKIAKFAT 924 (928)
Q Consensus 912 ~~~~~~~~i~~~~ 924 (928)
+||++.++||.+.
T Consensus 634 ~gR~~~~ni~~~i 646 (885)
T 3b8c_A 634 TSRAIFQRMKNYT 646 (885)
T ss_dssp THHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999888877543
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-70 Score=654.16 Aligned_cols=481 Identities=19% Similarity=0.225 Sum_probs=395.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhc------cceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecC
Q 002391 108 PLAIVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSY 181 (928)
Q Consensus 108 ~l~~vl~~~~~~~~~~d~~r~k~~~~~n------~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~ 181 (928)
...+++++..+.+++|.+.++++.+.++ ..+++|+++||++++|++++|+|||+|+|++||.|||||+|++
T Consensus 190 ~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~--- 266 (736)
T 3rfu_A 190 AAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE--- 266 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECS---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEE---
Confidence 3445556777888999999888765543 4778888569999999999999999999999999999999998
Q ss_pred CCceEEEEeecCCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEE
Q 002391 182 EDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKL 261 (928)
Q Consensus 182 ~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l 261 (928)
|.++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 267 --G~~~VDES~LTGES~Pv~K~~gd~v---------------------------~~Gt~~~~G~---------------- 301 (736)
T 3rfu_A 267 --GRSFVDESMVTGEPIPVAKEASAKV---------------------------IGATINQTGS---------------- 301 (736)
T ss_dssp --SCEEEECSSSTTCSSCEEECTTCEE---------------------------CTTCEEESCC----------------
T ss_pred --CceEeeecccCCccccEEeccCCcC---------------------------CCceEeccce----------------
Confidence 8899999999999999999987755 7888888777
Q ss_pred ecCCeEEEEEEEecCccee---eecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCC
Q 002391 262 RNTAHVYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKE 338 (928)
Q Consensus 262 ~nt~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~ 338 (928)
+++.|++||.+|.+ .++...++.+++++|+.+|+++.++++++++++++++++|+++.... .|
T Consensus 302 -----~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~---~~------ 367 (736)
T 3rfu_A 302 -----FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP---AL------ 367 (736)
T ss_dssp -----CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS---ST------
T ss_pred -----EEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc---hH------
Confidence 99999999999954 45555677788999999999999999999999999998877654311 12
Q ss_pred CccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEE
Q 002391 339 TDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTI 418 (928)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I 418 (928)
...|.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||++++|
T Consensus 368 --------------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 368 --------------SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG----------AQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp --------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH----------HHTTEEESCHHHHHHHTSCCEE
T ss_pred --------------HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH----------hhcceeechHHHHHHhcCCCEE
Confidence 2478889999999999999999999999999988 7899999999999999999999
Q ss_pred EecCCCceeeceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccc
Q 002391 419 LSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRR 498 (928)
Q Consensus 419 ~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (928)
|||||||||+|+|+|.++...+.. +
T Consensus 424 ~fDKTGTLT~g~~~v~~i~~~~~~------~------------------------------------------------- 448 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIVTDDFV------E------------------------------------------------- 448 (736)
T ss_dssp EECCBTTTBCSSCEEEEEEESSSC------H-------------------------------------------------
T ss_pred EEeCCCCCcCCceEEEEEEecCCC------H-------------------------------------------------
Confidence 999999999999999998743211 0
Q ss_pred cCCCcccchhhcccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeE
Q 002391 499 IKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSV 578 (928)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~ 578 (928)
.+++...+.+ ++.++||.+.|++++|++.|+.+.
T Consensus 449 -------------------------~~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~~~------- 482 (736)
T 3rfu_A 449 -------------------------DNALALAAAL--------------EHQSEHPLANAIVHAAKEKGLSLG------- 482 (736)
T ss_dssp -------------------------HHHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCCCC-------
T ss_pred -------------------------HHHHHHHHHH--------------hhcCCChHHHHHHHHHHhcCCCcc-------
Confidence 0112111111 122579999999999998775431
Q ss_pred EEEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcC
Q 002391 579 FIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658 (928)
Q Consensus 579 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 658 (928)
...+|++.+++... .. .+|+ .+.+|+++.+.+.... .....+.+++++.+|
T Consensus 483 --------------------~~~~f~~~~g~gv~-~~-~~g~--~~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~G 533 (736)
T 3rfu_A 483 --------------------SVEAFEAPTGKGVV-GQ-VDGH--HVAIGNARLMQEHGGD-----NAPLFEKADELRGKG 533 (736)
T ss_dssp --------------------CCSCCCCCTTTEEE-EC-SSSS--CEEEESHHHHHHHCCC-----CHHHHHHHHHHHHTT
T ss_pred --------------------CcccccccCCceEE-EE-ECCE--EEEEcCHHHHHHcCCC-----hhHHHHHHHHHHhcC
Confidence 23467776665432 22 2333 2445999877543221 234567788999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEE
Q 002391 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (928)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~ 738 (928)
+|++++|+ |.+++|+++++|++|++++++|+.|+++||+++
T Consensus 534 ~~vl~va~---------------------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~ 574 (736)
T 3rfu_A 534 ASVMFMAV---------------------------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIV 574 (736)
T ss_dssp CEEEEEEE---------------------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEE
T ss_pred CeEEEEEE---------------------------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEE
Confidence 99999994 568999999999999999999999999999999
Q ss_pred EEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhh
Q 002391 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (928)
Q Consensus 739 mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 818 (928)
|+|||+..+|..+|+++|+..
T Consensus 575 mlTGd~~~~a~~ia~~lgi~~----------------------------------------------------------- 595 (736)
T 3rfu_A 575 MLTGDSKRTAEAVAGTLGIKK----------------------------------------------------------- 595 (736)
T ss_dssp EECSSCHHHHHHHHHHHTCCC-----------------------------------------------------------
T ss_pred EECCCCHHHHHHHHHHcCCCE-----------------------------------------------------------
Confidence 999999999999999999831
Q ss_pred HhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhC
Q 002391 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSG 898 (928)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aa 898 (928)
++++++|++|..+|+.+++ .++.|+|+|||.||++||+.||+||||++. ...|+++|
T Consensus 596 ---------------------v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg~g-~d~a~~~A 652 (736)
T 3rfu_A 596 ---------------------VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMGTG-TDVAIESA 652 (736)
T ss_dssp ---------------------EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEESSS-CSHHHHHC
T ss_pred ---------------------EEEecCHHHHHHHHHHHHh-cCCEEEEEECChHhHHHHHhCCEEEEeCCc-cHHHHHhC
Confidence 7889999999999999998 689999999999999999999999999643 23399999
Q ss_pred ceeccccc----ccccccchhhHHHHhHHhh
Q 002391 899 HDMRKCIQ----VFAFDIADCSLKIAKFATF 925 (928)
Q Consensus 899 D~v~~~~~----~~~~~~~~~~~~~i~~~~~ 925 (928)
|+++...+ ..++++||++.++||.+.|
T Consensus 653 D~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~ 683 (736)
T 3rfu_A 653 GVTLLHGDLRGIAKARRLSESTMSNIRQNLF 683 (736)
T ss_dssp SEEECSCCSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99986433 3489999999999998765
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-67 Score=630.17 Aligned_cols=473 Identities=19% Similarity=0.227 Sum_probs=382.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhh------ccceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCC
Q 002391 110 AIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYED 183 (928)
Q Consensus 110 ~~vl~~~~~~~~~~d~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~ 183 (928)
++++++..+.+++|++.++|+.+.+ ...+++|+ |||++++|++++|+|||+|.|++||.|||||+|++
T Consensus 100 ~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~----- 173 (645)
T 3j08_A 100 VLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE----- 173 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE-----
Confidence 3445555778899999988865443 34789999 89999999999999999999999999999999999
Q ss_pred ceEEEEeecCCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEec
Q 002391 184 GICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN 263 (928)
Q Consensus 184 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~n 263 (928)
|.|+||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 174 G~~~VdeS~LTGES~Pv~K~~g~~v---------------------------~~Gt~~~~g~------------------ 208 (645)
T 3j08_A 174 GESYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV------------------ 208 (645)
T ss_dssp CCEEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC------------------
T ss_pred CcEEEEcccccCCCCceecCCCCEe---------------------------eccEEEecCc------------------
Confidence 7899999999999999999887544 6677666655
Q ss_pred CCeEEEEEEEecCcc---eeeecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCc
Q 002391 264 TAHVYGSVIFTGHDS---KVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (928)
Q Consensus 264 t~~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 340 (928)
+.+.|++||.+| ++.++.+.++.+++++++.+|+++.+++++++++++++++.|.++... +|.
T Consensus 209 ---~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~----~~~------- 274 (645)
T 3j08_A 209 ---LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA----PLL------- 274 (645)
T ss_dssp ---EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSC----SCC-------
T ss_pred ---EEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----cHH-------
Confidence 999999999999 455666788888999999999999999999999998888765443211 121
Q ss_pred cccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEe
Q 002391 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (928)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~ 420 (928)
..+..++.+++.+|||+|+++++++...+..++ +++++++|+++.+|+||++++|||
T Consensus 275 -------------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~f 331 (645)
T 3j08_A 275 -------------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVIF 331 (645)
T ss_dssp -------------CTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTCCCCSSTTHHHHGGGCCEEEE
T ss_pred -------------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HHCCeEecCchHHHHhhCCCEEEE
Confidence 245567889999999999999999999999888 789999999999999999999999
Q ss_pred cCCCceeeceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCccccccC
Q 002391 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (928)
Q Consensus 421 DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (928)
|||||||+|+|+|.++...+..
T Consensus 332 DKTGTLT~~~~~v~~~~~~~~~---------------------------------------------------------- 353 (645)
T 3j08_A 332 DKTGTLTKGKPEVTDLVPLNGD---------------------------------------------------------- 353 (645)
T ss_dssp EGGGTSSSSCCEEEEEEESSSC----------------------------------------------------------
T ss_pred cCcccccCCCeEEEEEEeCCCC----------------------------------------------------------
Confidence 9999999999999999765311
Q ss_pred CCcccchhhcccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEE
Q 002391 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580 (928)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i 580 (928)
..+++...+.|+. .+.||++.|+++++++.|+.+...
T Consensus 354 ----------------------~~~~l~~aa~~e~--------------~s~hPla~Aiv~~a~~~g~~~~~~------- 390 (645)
T 3j08_A 354 ----------------------ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEP------- 390 (645)
T ss_dssp ----------------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSC-------
T ss_pred ----------------------HHHHHHHHHHHhh--------------cCCChhHHHHHHHHHhcCCCcCCc-------
Confidence 0133344444432 257999999999999988754221
Q ss_pred EecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCe
Q 002391 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLR 660 (928)
Q Consensus 581 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr 660 (928)
..++ +...+. +.. ..+++|+++.+.+. +....+.+..++++++.+|+|
T Consensus 391 ------------~~~~--------~~~g~g-~~~-------~~v~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~ 438 (645)
T 3j08_A 391 ------------EKVE--------VIAGEG-VVA-------DGILVGNKRLMEDF----GVAVSNEVELALEKLEREAKT 438 (645)
T ss_dssp ------------CCCE--------EETTTE-EEE-------TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHTTTCC
T ss_pred ------------cceE--------EecCCc-eEE-------EEEEECCHHHHHhc----CCCccHHHHHHHHHHHhcCCe
Confidence 0010 000000 000 12445887665432 222345677888999999999
Q ss_pred EEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEE
Q 002391 661 TLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740 (928)
Q Consensus 661 ~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~ml 740 (928)
++++|+ |++++|+++++|++|++++++|+.|+++|++++|+
T Consensus 439 ~l~va~---------------------------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~ 479 (645)
T 3j08_A 439 AVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMI 479 (645)
T ss_dssp CEEEEE---------------------------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEE---------------------------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEE
Confidence 999994 67899999999999999999999999999999999
Q ss_pred cCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHh
Q 002391 741 TGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYA 820 (928)
Q Consensus 741 TGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~ 820 (928)
|||+..+|..+|+++|+.
T Consensus 480 TGd~~~~a~~ia~~lgi~-------------------------------------------------------------- 497 (645)
T 3j08_A 480 TGDNWRSAEAISRELNLD-------------------------------------------------------------- 497 (645)
T ss_dssp CSSCHHHHHHHHHHHTCS--------------------------------------------------------------
T ss_pred eCCCHHHHHHHHHHcCCC--------------------------------------------------------------
Confidence 999999999999999982
Q ss_pred hhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCce
Q 002391 821 LEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHD 900 (928)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~ 900 (928)
.++++++|++|..+++.+++ . +.|+|+|||.||++||+.||+||+|++. ...|+++||+
T Consensus 498 ------------------~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g-~~~a~~~AD~ 556 (645)
T 3j08_A 498 ------------------LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSG-SDVAVESGDI 556 (645)
T ss_dssp ------------------EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEECCC-SCCSSCCSSS
T ss_pred ------------------EEEEeCCHHhHHHHHHHHhh-C-CeEEEEeCCHhHHHHHHhCCEEEEeCCC-cHHHHHhCCE
Confidence 28899999999999999998 4 8899999999999999999999999643 2338999999
Q ss_pred eccccc----ccccccchhhHHHHhHHhh
Q 002391 901 MRKCIQ----VFAFDIADCSLKIAKFATF 925 (928)
Q Consensus 901 v~~~~~----~~~~~~~~~~~~~i~~~~~ 925 (928)
++...+ ..++++||++.++||.+.+
T Consensus 557 vl~~~~~~~i~~~i~~~r~~~~~i~~nl~ 585 (645)
T 3j08_A 557 VLIRDDLRDVVAAIQLSRKTMSKIKQNIF 585 (645)
T ss_dssp EESSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 986433 3488999999999987644
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-67 Score=638.57 Aligned_cols=474 Identities=19% Similarity=0.233 Sum_probs=383.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhc------cceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCC
Q 002391 109 LAIVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (928)
Q Consensus 109 l~~vl~~~~~~~~~~d~~r~k~~~~~n------~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~ 182 (928)
.++++++..+.+++|++.++++.+.++ ..+++|+ |||++++|+|++|+|||+|.|++||.|||||+|++
T Consensus 177 ~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~---- 251 (723)
T 3j09_A 177 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---- 251 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE----
Confidence 334555667888999999888755443 4689999 89999999999999999999999999999999999
Q ss_pred CceEEEEeecCCCCCcceeeecccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEe
Q 002391 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (928)
Q Consensus 183 ~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~ 262 (928)
|.++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 252 -G~~~VdeS~LTGES~pv~K~~g~~v---------------------------~~Gt~~~~g~----------------- 286 (723)
T 3j09_A 252 -GESYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV----------------- 286 (723)
T ss_dssp -CCEEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC-----------------
T ss_pred -CCeEEecccccCCCcceeecCCCee---------------------------ccceEEecCc-----------------
Confidence 8899999999999999999887544 6666666555
Q ss_pred cCCeEEEEEEEecCcc---eeeecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCC
Q 002391 263 NTAHVYGSVIFTGHDS---KVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (928)
Q Consensus 263 nt~~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~n~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 339 (928)
+.+.|++||.+| ++.++.+.++.+++++++.+|+++.++++++++++++++++|.++... +|.
T Consensus 287 ----~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~----~~~------ 352 (723)
T 3j09_A 287 ----LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA----PLL------ 352 (723)
T ss_dssp ----EEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTC----TTC------
T ss_pred ----EEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----cHH------
Confidence 999999999999 455666788888999999999999999999999998887765443211 121
Q ss_pred ccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEE
Q 002391 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (928)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~ 419 (928)
..|.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||++++||
T Consensus 353 --------------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~ 408 (723)
T 3j09_A 353 --------------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVI 408 (723)
T ss_dssp --------------CSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHGGGCCEEE
T ss_pred --------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH----------HHCCeEEeChHHHHHhhcCCEEE
Confidence 357778999999999999999999999999888 78999999999999999999999
Q ss_pred ecCCCceeeceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCCCCcccchhhhcccCCCCcccccc
Q 002391 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (928)
Q Consensus 420 ~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (928)
||||||||+|+|+|.++...+.. +
T Consensus 409 fDKTGTLT~g~~~v~~~~~~~~~------~-------------------------------------------------- 432 (723)
T 3j09_A 409 FDKTGTLTKGKPEVTDLVPLNGD------E-------------------------------------------------- 432 (723)
T ss_dssp EEHHHHTSCSCCEEEEEEESSSC------H--------------------------------------------------
T ss_pred EcCCCccccCceEEEEEEeCCCC------H--------------------------------------------------
Confidence 99999999999999999765311 0
Q ss_pred CCCcccchhhcccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEE
Q 002391 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (928)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~ 579 (928)
.+++...+.|.. .+.||++.|+++++++.|+.+...
T Consensus 433 ------------------------~~~l~~aa~~e~--------------~s~hP~~~Ai~~~a~~~~~~~~~~------ 468 (723)
T 3j09_A 433 ------------------------RELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEP------ 468 (723)
T ss_dssp ------------------------HHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSC------
T ss_pred ------------------------HHHHHHHHHHhc--------------cCCCchhHHHHHHHHhcCCCcCCc------
Confidence 123333343322 257999999999999988654221
Q ss_pred EEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCC
Q 002391 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (928)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Gl 659 (928)
..++ +...+ .+.. ..+.+|+++.+.+. +....+.+..++++++.+|+
T Consensus 469 -------------~~~~--------~~~g~-g~~~-------~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~g~ 515 (723)
T 3j09_A 469 -------------EKVE--------VIAGE-GVVA-------DGILVGNKRLMEDF----GVAVSNEVELALEKLEREAK 515 (723)
T ss_dssp -------------CCCE--------EETTT-EEEE-------TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHTTTC
T ss_pred -------------cceE--------EecCC-ceEE-------EEEEECCHHHHHhc----CCCccHHHHHHHHHHHhcCC
Confidence 0111 00000 0000 12445887665432 22234567788899999999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCChHHHHHHHHHcCCcEEE
Q 002391 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (928)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~m 739 (928)
|++++|+ |++++|+++++|++|++++++|+.|+++||+++|
T Consensus 516 ~~~~va~---------------------------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~ 556 (723)
T 3j09_A 516 TAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGM 556 (723)
T ss_dssp EEEEEEE---------------------------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEE
T ss_pred eEEEEEE---------------------------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEE
Confidence 9999994 6789999999999999999999999999999999
Q ss_pred EcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhH
Q 002391 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (928)
Q Consensus 740 lTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (928)
+|||+..+|..+|+++|+.
T Consensus 557 ~TGd~~~~a~~ia~~lgi~------------------------------------------------------------- 575 (723)
T 3j09_A 557 ITGDNWRSAEAISRELNLD------------------------------------------------------------- 575 (723)
T ss_dssp ECSSCHHHHHHHHHHHTCS-------------------------------------------------------------
T ss_pred ECCCCHHHHHHHHHHcCCc-------------------------------------------------------------
Confidence 9999999999999999982
Q ss_pred hhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCc
Q 002391 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGH 899 (928)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD 899 (928)
.++++++|++|..+++.+++ . +.|+|+|||.||++||+.||+||||++. ...|+++||
T Consensus 576 -------------------~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g-~~~a~~~AD 633 (723)
T 3j09_A 576 -------------------LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSG-SDVAVESGD 633 (723)
T ss_dssp -------------------EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECCCC-SCCSSCCSS
T ss_pred -------------------EEEccCCHHHHHHHHHHHhc-C-CeEEEEECChhhHHHHhhCCEEEEeCCC-cHHHHHhCC
Confidence 28899999999999999998 4 8899999999999999999999999643 233899999
Q ss_pred eeccccc----ccccccchhhHHHHhHHhh
Q 002391 900 DMRKCIQ----VFAFDIADCSLKIAKFATF 925 (928)
Q Consensus 900 ~v~~~~~----~~~~~~~~~~~~~i~~~~~ 925 (928)
+++...+ ..++++||++.++||.+.+
T Consensus 634 ~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~ 663 (723)
T 3j09_A 634 IVLIRDDLRDVVAAIQLSRKTMSKIKQNIF 663 (723)
T ss_dssp EECSSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9986433 3488999999999986654
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.3e-26 Score=243.93 Aligned_cols=136 Identities=19% Similarity=0.240 Sum_probs=113.9
Q ss_pred ccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHh
Q 002391 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKD 785 (928)
Q Consensus 706 dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~ 785 (928)
+-.+.|.+.+.|+++|++.++|+.|++.|++++|+|||+..++..+++.+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 445789999999999999999999999999999999999999999999988721
Q ss_pred hHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEE
Q 002391 786 NILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTL 865 (928)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vl 865 (928)
+|..+.|+.|..+++.++. .+..++
T Consensus 178 ------------------------------------------------------~f~~~~p~~k~~~~~~l~~-~~~~~~ 202 (263)
T 2yj3_A 178 ------------------------------------------------------YYSNLSPEDKVRIIEKLKQ-NGNKVL 202 (263)
Confidence 3444559999999999986 677899
Q ss_pred EEcCCcccHHHHHhCCccEEecCCchhHHHHhCceec--cccc--ccccccchhhHHHHhHH
Q 002391 866 AIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMR--KCIQ--VFAFDIADCSLKIAKFA 923 (928)
Q Consensus 866 aiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~--~~~~--~~~~~~~~~~~~~i~~~ 923 (928)
|||||.||++|++.||+||+++.. ...+...+|++. .... +.++++||++.++||.+
T Consensus 203 ~VGD~~~D~~aa~~Agv~va~g~~-~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 203 MIGDGVNDAAALALADVSVAMGNG-VDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 999999999999999999998543 233677889887 3111 33899999999999864
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.87 E-value=7.3e-21 Score=206.28 Aligned_cols=270 Identities=22% Similarity=0.293 Sum_probs=188.2
Q ss_pred CCCCeEEecccchhhcccceEEEecCCCceeeceeEEEEEEEcCcccCCCchHHHHHHHHHhhhchhhhhhhhhhcccCC
Q 002391 397 SGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476 (928)
Q Consensus 397 ~~~~~~vr~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (928)
+++++++|+++.+|.|+++++|+||||||||.+.+.+..+...+. ++
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~------~~--------------------------- 60 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------DE--------------------------- 60 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS------CH---------------------------
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC------CH---------------------------
Confidence 789999999999999999999999999999999999988765431 00
Q ss_pred CCcccchhhhcccCCCCccccccCCCcccchhhcccCCCCCCChHHHHHHHHHHhhccceeecccCCCCceEEecCChhH
Q 002391 477 SGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDE 556 (928)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e 556 (928)
.+++. +|..+ + ..+.||.+
T Consensus 61 -----------------------------------------------~~~l~---~~~~~--e---------~~s~hp~~ 79 (287)
T 3a1c_A 61 -----------------------------------------------RELLR---LAAIA--E---------RRSEHPIA 79 (287)
T ss_dssp -----------------------------------------------HHHHH---HHHHH--T---------TTCCSHHH
T ss_pred -----------------------------------------------HHHHH---HHHHH--h---------hcCCCHHH
Confidence 01111 22222 1 12579999
Q ss_pred HHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhhhHHhh
Q 002391 557 AAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRL 636 (928)
Q Consensus 557 ~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~ 636 (928)
.|+.++++.+|+..... ..+..+ . .. ++. . . .+.+|.++.+.+.
T Consensus 80 ~a~~~~~~~~g~~~~~~-------------------~~~~~~---~----G~--~~~--~--~---~~~~g~~~~~~~~- 123 (287)
T 3a1c_A 80 EAIVKKALEHGIELGEP-------------------EKVEVI---A----GE--GVV--A--D---GILVGNKRLMEDF- 123 (287)
T ss_dssp HHHHHHHHHTTCCCCCC-------------------SCEEEE---T----TT--EEE--E--T---TEEEECHHHHHHT-
T ss_pred HHHHHHHHhcCCCcccc-------------------ccceee---c----CC--CeE--E--E---EEEECCHHHHHhc-
Confidence 99999999988653110 011100 0 00 000 0 1 1234554433221
Q ss_pred cccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeec
Q 002391 637 SKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVE 716 (928)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~ 716 (928)
+...++.+...++.+..+|.+++++++ |..+++.+...
T Consensus 124 ---~~~~~~~~~~~~~~~~~~g~~~i~~~~---------------------------------------d~~~~~~~~~~ 161 (287)
T 3a1c_A 124 ---GVAVSNEVELALEKLEREAKTAVIVAR---------------------------------------NGRVEGIIAVS 161 (287)
T ss_dssp ---TCCCCHHHHHHHHHHHHTTCEEEEEEE---------------------------------------TTEEEEEEEEE
T ss_pred ---CCCccHHHHHHHHHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEec
Confidence 111112345567788889999999984 45688999999
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhh
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
++++|++.++|+.|+++|++++++||++...+..++..+|+..
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------------------- 204 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------------------------------------- 204 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------------------------------------
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce-------------------------------------
Confidence 9999999999999999999999999999999999999888721
Q ss_pred hhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHH
Q 002391 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (928)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~m 876 (928)
.|..+.|..|..+++.+.. . ..++||||+.||+.|
T Consensus 205 -------------------------------------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~ 239 (287)
T 3a1c_A 205 -------------------------------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPA 239 (287)
T ss_dssp -------------------------------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHH
T ss_pred -------------------------------------------eeeecChHHHHHHHHHHhc-C-CeEEEEECCHHHHHH
Confidence 3344558899999999987 5 889999999999999
Q ss_pred HHhCCccEEecCCchhHHHHhCceec--cccc--ccccccchhhHHHHh
Q 002391 877 IQEADIGIGISGVEGMQIVLSGHDMR--KCIQ--VFAFDIADCSLKIAK 921 (928)
Q Consensus 877 L~~AdvGIa~~g~e~~~a~~aaD~v~--~~~~--~~~~~~~~~~~~~i~ 921 (928)
.+.||+||++.+... .++..+|++. .... +.+++.+|++.++||
T Consensus 240 a~~ag~~v~~~~~~~-~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 240 LAQADLGIAVGSGSD-VAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHHSSEEEEECCCSC-CSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHHCCeeEEeCCCCH-HHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 999999999964322 2556789887 3211 337889999988875
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.82 E-value=5e-21 Score=174.22 Aligned_cols=100 Identities=23% Similarity=0.258 Sum_probs=89.9
Q ss_pred hhhhhccceEEEEeCCceEEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcceeeecccccC
Q 002391 130 QDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATS 209 (928)
Q Consensus 130 ~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~ 209 (928)
+...+...+++|+ |+|+++++++++|+|||+|.|++||.|||||+|++ |.++||||+|||||.|+.|.+++..
T Consensus 5 ~L~~l~p~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~-----g~~~vdeS~LTGEs~pv~k~~g~~v- 77 (113)
T 2hc8_A 5 KLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-----GESYVDESMISGEPVPVLKSKGDEV- 77 (113)
T ss_dssp HHHHHSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----CCEEEECHHHHCCSSCEEECTTCEE-
T ss_pred HHhcCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ceEEEEccccCCCCccEEECCCCEE-
Confidence 3455667889999 79999999999999999999999999999999999 7799999999999999999987644
Q ss_pred CCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcceeeec
Q 002391 210 PLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQN 283 (928)
Q Consensus 210 ~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~~~ 283 (928)
|+|+++.+|. +.++|++||.+|.+++.
T Consensus 78 --------------------------~aGt~~~~G~---------------------~~~~V~~~g~~T~~~~i 104 (113)
T 2hc8_A 78 --------------------------FGATINNTGV---------------------LKIRATRVGGETLLAQI 104 (113)
T ss_dssp --------------------------CTTCEECSSC---------------------EEEEEEECGGGSHHHHH
T ss_pred --------------------------EeCCEEeece---------------------EEEEEEEecCcCHHHHH
Confidence 8898888888 99999999999976543
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=7e-19 Score=189.48 Aligned_cols=136 Identities=23% Similarity=0.253 Sum_probs=109.5
Q ss_pred ccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHh
Q 002391 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKD 785 (928)
Q Consensus 706 dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~ 785 (928)
+..++|.+.+.+++++++.++++.|++.|+++.++||+....+..+++.+|+..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 185 (280)
T 3skx_A 132 NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD-------------------------- 185 (280)
T ss_dssp TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------
T ss_pred CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh--------------------------
Confidence 456899999999999999999999999999999999999999999999988731
Q ss_pred hHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEE
Q 002391 786 NILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTL 865 (928)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vl 865 (928)
.|..+.|.+|...++.+.+ . ..++
T Consensus 186 ------------------------------------------------------~f~~~~~~~k~~~~k~~~~-~-~~~~ 209 (280)
T 3skx_A 186 ------------------------------------------------------YFAEVLPHEKAEKVKEVQQ-K-YVTA 209 (280)
T ss_dssp ------------------------------------------------------EECSCCGGGHHHHHHHHHT-T-SCEE
T ss_pred ------------------------------------------------------HhHhcCHHHHHHHHHHHHh-c-CCEE
Confidence 4455678899999998876 3 3679
Q ss_pred EEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc----ccccccchhhHHHHhHHh
Q 002391 866 AIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ----VFAFDIADCSLKIAKFAT 924 (928)
Q Consensus 866 aiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~----~~~~~~~~~~~~~i~~~~ 924 (928)
||||+.||++|++.||+||+|++... .++..||+++...+ ..+++++|++.++++.+.
T Consensus 210 ~vGD~~nDi~~~~~Ag~~va~~~~~~-~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~ 271 (280)
T 3skx_A 210 MVGDGVNDAPALAQADVGIAIGAGTD-VAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLS 271 (280)
T ss_dssp EEECTTTTHHHHHHSSEEEECSCCSS-SCCCSSSEECSSCCTHHHHHHHHHHHTCCC------
T ss_pred EEeCCchhHHHHHhCCceEEecCCcH-HHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999965433 27788999984333 337888999888887653
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.5e-19 Score=165.11 Aligned_cols=98 Identities=21% Similarity=0.236 Sum_probs=86.0
Q ss_pred hhhhccceEEEEeCCce------EEEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcceeeec
Q 002391 131 DKEVNARKVSVHVGNGV------FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRA 204 (928)
Q Consensus 131 ~~~~n~~~~~V~~r~g~------~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~ 204 (928)
...+....++|+ |+|. ++.|++++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.+
T Consensus 12 L~~l~p~~a~v~-r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~-----g~~~vdeS~LTGEs~pv~k~~ 85 (124)
T 2kij_A 12 LISLQATEATIV-TLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIE-----GHSMVDESLITGEAMPVAKKP 85 (124)
T ss_dssp HHHTCCSEEEEE-ECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECS-----CCCEEECTTTTCCSSCEECCT
T ss_pred HhccCCCEEEEE-ECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEE-----ccEEEEeccccCCCccEEeCC
Confidence 344567889999 6553 7899999999999999999999999999999 667999999999999999998
Q ss_pred ccccCCCCchhhhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcceeee
Q 002391 205 MEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ 282 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~~ 282 (928)
++.. |+||++.+|. +.+.|+.||.+|.+.+
T Consensus 86 g~~v---------------------------~aGt~~~~G~---------------------~~~~v~~~g~~T~~~~ 115 (124)
T 2kij_A 86 GSTV---------------------------IAGSINQNGS---------------------LLICATHVGADTTLSQ 115 (124)
T ss_dssp TEEE---------------------------CTTCEEESSC---------------------CEEEECSCTTTCHHHH
T ss_pred CCEE---------------------------EcCCEEeeeE---------------------EEEEEEEecccCHHHH
Confidence 7654 8888888887 9999999999997654
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-18 Score=169.77 Aligned_cols=125 Identities=26% Similarity=0.331 Sum_probs=99.3
Q ss_pred CChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchhh
Q 002391 552 ESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSI 631 (928)
Q Consensus 552 ~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~ 631 (928)
++|+|.|+++++...++.- ....|+++..+||+|.|||||++++.++|..++|+|||||.
T Consensus 33 ~n~~d~Ail~~~~~~~~~~--------------------~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~ 92 (170)
T 3gwi_A 33 KNLLDTAVLEGTDEESARS--------------------LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQE 92 (170)
T ss_dssp CCHHHHHHHHTSCHHHHHH--------------------HHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHH
T ss_pred CChHHHHHHHHHHhcChhh--------------------hhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHH
Confidence 6999999999875432100 13568899999999999999999998888899999999999
Q ss_pred hHHhhccc---------ccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHh
Q 002391 632 IFDRLSKN---------GRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDM 702 (928)
Q Consensus 632 i~~~~~~~---------~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ 702 (928)
|+++|+.. .+..++.+.+.+++|+.+|+|||++|||+++..+.. ....
T Consensus 93 IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~-----------------------~~~~ 149 (170)
T 3gwi_A 93 ILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD-----------------------YQRA 149 (170)
T ss_dssp HHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC-----------------------CCGG
T ss_pred HHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc-----------------------cCcc
Confidence 99999851 223567888999999999999999999998753200 0123
Q ss_pred hhcccEEEeeeeecccC
Q 002391 703 MEKDLILVGATAVEDKL 719 (928)
Q Consensus 703 ie~dl~llG~~~i~D~l 719 (928)
.|+||+|+|++||-|.-
T Consensus 150 ~E~~L~f~G~~g~~~~~ 166 (170)
T 3gwi_A 150 DESDLILEGYIAFLDHH 166 (170)
T ss_dssp GSCSEEEEEEEEEEC--
T ss_pred ccCCcEEEehhcccccc
Confidence 58999999999998863
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2.1e-16 Score=172.06 Aligned_cols=138 Identities=12% Similarity=0.090 Sum_probs=100.6
Q ss_pred ecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHh
Q 002391 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNA 794 (928)
Q Consensus 715 i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (928)
..++++++++++++.|+++|+++.|+|||...++.++++++|+...+..++. +....+
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~-n~l~~~--------------------- 195 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVS-NFMDFD--------------------- 195 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEE-ECEEEC---------------------
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEe-eeEEEc---------------------
Confidence 3579999999999999999999999999999999999999998765544332 111100
Q ss_pred hhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccH
Q 002391 795 SQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDV 874 (928)
Q Consensus 795 ~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~ 874 (928)
.......+.++. ...+++..|.+|...+..+++ .+..|+|+|||.||+
T Consensus 196 ----------~~~~~~~~~~~~---------------------i~~~~k~~~~~k~~~~~~~~~-~~~~v~~vGDGiNDa 243 (297)
T 4fe3_A 196 ----------ENGVLKGFKGEL---------------------IHVFNKHDGALKNTDYFSQLK-DNSNIILLGDSQGDL 243 (297)
T ss_dssp ----------TTSBEEEECSSC---------------------CCTTCHHHHHHTCHHHHHHTT-TCCEEEEEESSGGGG
T ss_pred ----------ccceeEeccccc---------------------cchhhcccHHHHHHHHHHhhc-cCCEEEEEeCcHHHH
Confidence 000111112211 113556778888877887776 688999999999999
Q ss_pred HHHH---hCCccEEec--C----CchhHHHHhCceeccccc
Q 002391 875 GMIQ---EADIGIGIS--G----VEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 875 ~mL~---~AdvGIa~~--g----~e~~~a~~aaD~v~~~~~ 906 (928)
+|++ .||+||+|+ + .....+++++|+|+..++
T Consensus 244 ~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~ 284 (297)
T 4fe3_A 244 RMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEE 284 (297)
T ss_dssp GTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCC
T ss_pred HHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCC
Confidence 9955 999999985 1 222236899999998777
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.7e-09 Score=116.29 Aligned_cols=187 Identities=12% Similarity=0.123 Sum_probs=106.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc----cccCc-------eEEEEeCCCcchHHHHHHHHHHh-
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL----LRQGM-------KQICITALNSDSVGKAAKEAVKD- 785 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi----i~~~~-------~~i~~~~~~~~~~~~~~~~~~~~- 785 (928)
.+-+.+.++|++|+++|++++++|||+...+..+...+++ +..++ +.+.....+.+.....+....+.
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 4778999999999999999999999999999998887764 22222 23333333433333333322221
Q ss_pred --------------------hHHHHHHHhhhh-------hhccCCCcCcEEEEE-cCchhhHhhhHHHHHHHHh-hhhcc
Q 002391 786 --------------------NILMQITNASQM-------IKLERDPHAAYALII-EGKTLAYALEDDMKHHFLG-LAVEC 836 (928)
Q Consensus 786 --------------------~~~~~~~~~~~~-------~~~~~~~~~~~~lvi-~G~~l~~~~~~~~~~~~~~-~~~~~ 836 (928)
.....+...... +..-.........+. +........ +.+...+.. +....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~~~-~~l~~~~~~~~~~~~ 197 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEELCT-PVFIPAWNKKAHLAA 197 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHHHT-TTHHHHHTTTEEEEE
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHHHH-HHHHHHhcCCEEEEE
Confidence 011111100000 000000111112222 222222211 122233321 11111
Q ss_pred CeeEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 837 ASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 837 ~~~v~~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
....+....|. .|+..++.+.++.| ..|++|||+.||++|++.|++||+|++.... ++.+||+++.-..
T Consensus 198 s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~-~k~~A~~v~~s~~ 271 (283)
T 3dao_A 198 AGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQE-VIAAAKHTCAPYW 271 (283)
T ss_dssp ETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHH-HHHHSSEEECCGG
T ss_pred ecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHH-HHHhcCeECCCCC
Confidence 11123344554 59988888876544 5699999999999999999999999776554 9999999987444
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.02 E-value=5.6e-10 Score=119.73 Aligned_cols=188 Identities=15% Similarity=0.217 Sum_probs=104.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc-------cc---------CceEEEEeCCCcchHHHHHHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL-------RQ---------GMKQICITALNSDSVGKAAKE 781 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii-------~~---------~~~~i~~~~~~~~~~~~~~~~ 781 (928)
.+.+.+.++|++|+++|++++++|||+...+..+...+|+. .. +.+.+.....+.+.....+..
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~~ 101 (279)
T 4dw8_A 22 EISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYEC 101 (279)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHHH
Confidence 46788999999999999999999999999999999998862 11 122233333344444444333
Q ss_pred HHHhhHH------------------HHHHHhhhhhh--------ccCCCcCcEEEEEcCchhhHhhhHHHHHHHHh-hhh
Q 002391 782 AVKDNIL------------------MQITNASQMIK--------LERDPHAAYALIIEGKTLAYALEDDMKHHFLG-LAV 834 (928)
Q Consensus 782 ~~~~~~~------------------~~~~~~~~~~~--------~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~-~~~ 834 (928)
.....+. ........... ..........++.+.......+.+.+...+.. +..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (279)
T 4dw8_A 102 ARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINV 181 (279)
T ss_dssp HHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTCEE
T ss_pred HHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCEEE
Confidence 2221100 00000000000 00000011112222211111111112211111 111
Q ss_pred ccCeeEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 835 ECASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 835 ~~~~~v~~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
......+....|. .|...++.+.+..| ..|++|||+.||++|++.|++||+|++.... ++.+||+++.-..
T Consensus 182 ~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~~~ 257 (279)
T 4dw8_A 182 FRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEP-VKKAADYITLTND 257 (279)
T ss_dssp EEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCSEECCCGG
T ss_pred EEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHH-HHHhCCEEcCCCC
Confidence 1111123355565 68888888766533 5799999999999999999999999765544 9999999987444
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.00 E-value=3e-10 Score=121.83 Aligned_cols=186 Identities=13% Similarity=0.108 Sum_probs=96.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccccc-------C--------ceEEEEeCCCcchHHHHHHHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQ-------G--------MKQICITALNSDSVGKAAKEA 782 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~-------~--------~~~i~~~~~~~~~~~~~~~~~ 782 (928)
.+.+.+.++|++|++.|++++++|||+...+..+...+|+..+ + .+.+.....+.+.....+...
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~~ 101 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAWA 101 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHHH
Confidence 4678899999999999999999999999999999999886431 1 122222233333333333322
Q ss_pred HHhh-------------------HHHHHHHhhhhhh-------ccCCCcCcEEEEEcCch--hhHhhhHHHHHHHHh-hh
Q 002391 783 VKDN-------------------ILMQITNASQMIK-------LERDPHAAYALIIEGKT--LAYALEDDMKHHFLG-LA 833 (928)
Q Consensus 783 ~~~~-------------------~~~~~~~~~~~~~-------~~~~~~~~~~lvi~G~~--l~~~~~~~~~~~~~~-~~ 833 (928)
.+.. ............. .-........+.+.+.. +..+ .+.+...+.. +.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~-~~~l~~~~~~~~~ 180 (279)
T 3mpo_A 102 RKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQV-KANMPQDFKDRFS 180 (279)
T ss_dssp HHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHH-HHHCCHHHHHHEE
T ss_pred HHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHH-HHHHHHHhCCCEE
Confidence 2210 0000000000000 00000111112222211 1111 1111111111 11
Q ss_pred hccCeeEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceecccc
Q 002391 834 VECASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCI 905 (928)
Q Consensus 834 ~~~~~~v~~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~ 905 (928)
.......+....|. .|...++.+.+..| ..+++|||+.||++|++.|++||+|++.... ++.+||+++.-.
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~~ 256 (279)
T 3mpo_A 181 VVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDE-VKEAAQAVTLTN 256 (279)
T ss_dssp EECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCH-HHHHCSCBC---
T ss_pred EEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHH-HHHhcceeccCC
Confidence 11112233455554 59888888876544 5799999999999999999999999765544 999999998743
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.95 E-value=6.9e-10 Score=119.73 Aligned_cols=59 Identities=22% Similarity=0.258 Sum_probs=49.1
Q ss_pred hhHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 847 KQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 847 ~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+|++.... ++.+||+++.-..
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~s~~ 262 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPE-IKRKADWVTRSND 262 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHSSEECCCTT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHH-HHHhcCEECCCCC
Confidence 469888888876544 5799999999999999999999999776554 9999999986433
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.91 E-value=2.3e-09 Score=111.18 Aligned_cols=175 Identities=13% Similarity=0.076 Sum_probs=97.7
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccc----cCceEEEE-eCCCcchHHHHHHHHHHhhHHHH
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR----QGMKQICI-TALNSDSVGKAAKEAVKDNILMQ 790 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~----~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~ 790 (928)
...+.+++.++|++|+++|++++++|||+...+..+++.+|+-. .++..+.. ++.... ....+ .. -..+ ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~-~~~~l-~~-~~~i-~~ 95 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKK-FFSNE-GT-NKFL-EE 95 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEE-SSCSH-HH-HHHH-HH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEE-EeccH-HH-HHHH-HH
Confidence 34578889999999999999999999999999999999988632 22222221 111000 00000 00 0001 11
Q ss_pred HHHhhhhhhccCC------CcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccC---eeEEEEcCh--hhHHHHHHHHhhc
Q 002391 791 ITNASQMIKLERD------PHAAYALIIEGKTLAYALEDDMKHHFLGLAVECA---SVICCRVSP--KQKALVTRLVKEG 859 (928)
Q Consensus 791 ~~~~~~~~~~~~~------~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~---~~v~~r~~P--~qK~~iV~~l~~~ 859 (928)
+.. .+ .... ....... + +. ..+++....+.... ... ...+....| ..|...++.+.+.
T Consensus 96 ~~~---~~-~~~~~~~~~~~~~~~~~-~----~~-~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~ 164 (227)
T 1l6r_A 96 MSK---RT-SMRSILTNRWREASTGF-D----ID-PEDVDYVRKEAESR-GFVIFYSGYSWHLMNRGEDKAFAVNKLKEM 164 (227)
T ss_dssp HTT---TS-SCBCCGGGGGCSSSEEE-B----CC-GGGHHHHHHHHHTT-TEEEEEETTEEEEEETTCSHHHHHHHHHHH
T ss_pred HHH---Hh-cCCccccccceecccce-E----Ee-cCCHHHHHHHHHhc-CEEEEecCcEEEEecCCCCHHHHHHHHHHH
Confidence 100 00 0000 0000000 0 00 01111111111111 111 111234445 5799888888764
Q ss_pred CC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 860 TG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 860 ~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
.+ ..+++|||+.||++|++.|++||+|++... .++..||+++.-+.
T Consensus 165 ~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~-~~k~~a~~v~~~~~ 213 (227)
T 1l6r_A 165 YSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD-NIKAVSDFVSDYSY 213 (227)
T ss_dssp TTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCH-HHHHHCSEECSCCT
T ss_pred hCcCHHHEEEECCcHHhHHHHHHcCceEEecCchH-HHHHhCCEEecCCC
Confidence 33 579999999999999999999999976544 48889999987544
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.3e-09 Score=118.62 Aligned_cols=59 Identities=17% Similarity=0.230 Sum_probs=49.4
Q ss_pred hhHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 847 KQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 847 ~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
..|+..++.+.++.| ..+++|||+.||++|++.|++||+|++.... ++.+||+++.-..
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~~~~ 288 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKN-VKAAANYQAKSND 288 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHH-HHHHCSEECCCGG
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHH-HHHhccEEcCCCC
Confidence 469988888876544 5699999999999999999999999766554 9999999987543
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.86 E-value=2.7e-09 Score=104.79 Aligned_cols=109 Identities=13% Similarity=0.066 Sum_probs=82.6
Q ss_pred ccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHH--HccccccCceEEEEeCCCcchHHHHHHHHH
Q 002391 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF--ACSLLRQGMKQICITALNSDSVGKAAKEAV 783 (928)
Q Consensus 706 dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~--~~gii~~~~~~i~~~~~~~~~~~~~~~~~~ 783 (928)
+...++.+.++|. .+|+.|++.|+++.|+||+ ..+..+++ .+|+.
T Consensus 30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 3455667777777 3899999999999999999 67777887 44541
Q ss_pred HhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcC---
Q 002391 784 KDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT--- 860 (928)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~--- 860 (928)
++ ..+++|...++.+.+..
T Consensus 77 --------------------------------------------------------~~--~g~~~K~~~l~~~~~~~gi~ 98 (168)
T 3ewi_A 77 --------------------------------------------------------TE--VSVSDKLATVDEWRKEMGLC 98 (168)
T ss_dssp --------------------------------------------------------EE--CSCSCHHHHHHHHHHHTTCC
T ss_pred --------------------------------------------------------EE--ECCCChHHHHHHHHHHcCcC
Confidence 00 12346777777665543
Q ss_pred CCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 861 GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 861 g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
...+++|||+.||++|++.|+++++|.+... .++..||+++....
T Consensus 99 ~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~-~~k~~Ad~v~~~~~ 143 (168)
T 3ewi_A 99 WKEVAYLGNEVSDEECLKRVGLSAVPADACS-GAQKAVGYICKCSG 143 (168)
T ss_dssp GGGEEEECCSGGGHHHHHHSSEEEECTTCCH-HHHTTCSEECSSCT
T ss_pred hHHEEEEeCCHhHHHHHHHCCCEEEeCChhH-HHHHhCCEEeCCCC
Confidence 3679999999999999999999999966544 39999999998543
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.85 E-value=2e-09 Score=115.83 Aligned_cols=182 Identities=18% Similarity=0.197 Sum_probs=98.3
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc----ccCc--------eEEEEeCCCcchHHHHHHHHHHh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL----RQGM--------KQICITALNSDSVGKAAKEAVKD 785 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii----~~~~--------~~i~~~~~~~~~~~~~~~~~~~~ 785 (928)
.+-+.+.++|++|++.|++++++|||+...+..+...+|+- ..++ +.+.....+.+.....+......
T Consensus 38 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~~ 117 (285)
T 3pgv_A 38 FLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRND 117 (285)
T ss_dssp CCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTTC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhhc
Confidence 47778999999999999999999999999999999988863 2222 22222222322222221100000
Q ss_pred -hHHHHHHHhhhhhhc----------------------cC-CCcC-cEEEEEcCch-hhHhhhHHHHHHHHh-hhhccCe
Q 002391 786 -NILMQITNASQMIKL----------------------ER-DPHA-AYALIIEGKT-LAYALEDDMKHHFLG-LAVECAS 838 (928)
Q Consensus 786 -~~~~~~~~~~~~~~~----------------------~~-~~~~-~~~lvi~G~~-l~~~~~~~~~~~~~~-~~~~~~~ 838 (928)
.....+......+.. .. .... ...++.++.. -...+.+.+...+.. +......
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~ 197 (285)
T 3pgv_A 118 PKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFST 197 (285)
T ss_dssp TTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEESS
T ss_pred CCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 000000000000000 00 0000 1112221211 101111222222221 1111111
Q ss_pred eEEEEcCh--hhHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCce
Q 002391 839 VICCRVSP--KQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHD 900 (928)
Q Consensus 839 ~v~~r~~P--~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~ 900 (928)
..+....| ..|+..++.+.+..| ..+++|||+.||++|++.|++||||++.... +|.+||+
T Consensus 198 ~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~-vk~~A~~ 263 (285)
T 3pgv_A 198 LTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQR-LKDLHPE 263 (285)
T ss_dssp TTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCTT
T ss_pred CceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHH-HHHhCCC
Confidence 22344555 359988888876544 5799999999999999999999999776554 9999995
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.85 E-value=4.9e-09 Score=105.42 Aligned_cols=126 Identities=13% Similarity=0.144 Sum_probs=92.4
Q ss_pred EEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHH
Q 002391 709 LVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNIL 788 (928)
Q Consensus 709 llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
.++.+.++|.+ +|+.|+++|+++.|+||+....+..+++.+|+..
T Consensus 43 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~----------------------------- 87 (189)
T 3mn1_A 43 EIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH----------------------------- 87 (189)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE-----------------------------
T ss_pred EeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH-----------------------------
Confidence 44445555443 9999999999999999999999999999999831
Q ss_pred HHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc---CCCEEE
Q 002391 789 MQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTL 865 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~---~g~~vl 865 (928)
+|.. +..|...++.+.+. ....++
T Consensus 88 ---------------------------------------------------~f~~--~~~K~~~~~~~~~~~g~~~~~~~ 114 (189)
T 3mn1_A 88 ---------------------------------------------------LFQG--REDKLVVLDKLLAELQLGYEQVA 114 (189)
T ss_dssp ---------------------------------------------------EECS--CSCHHHHHHHHHHHHTCCGGGEE
T ss_pred ---------------------------------------------------HhcC--cCChHHHHHHHHHHcCCChhHEE
Confidence 1111 15566666655543 246799
Q ss_pred EEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc--------ccccccchhhHHHHhHH
Q 002391 866 AIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ--------VFAFDIADCSLKIAKFA 923 (928)
Q Consensus 866 aiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~--------~~~~~~~~~~~~~i~~~ 923 (928)
+|||+.||++|++.|++|+++++... .++..||+++..+. ...+..++.+.+.|+..
T Consensus 115 ~vGD~~nDi~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~ 179 (189)
T 3mn1_A 115 YLGDDLPDLPVIRRVGLGMAVANAAS-FVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSV 179 (189)
T ss_dssp EEECSGGGHHHHHHSSEEEECTTSCH-HHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHT
T ss_pred EECCCHHHHHHHHHCCCeEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHH
Confidence 99999999999999999999966443 38899999987642 22455566666666543
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.81 E-value=5.2e-09 Score=110.78 Aligned_cols=58 Identities=24% Similarity=0.330 Sum_probs=47.4
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 848 QKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 848 qK~~iV~~l~~~~---g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
.|+..++.+.+.. ...|++|||+.||++|++.|++||+|++.. .+++..||+++.-..
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~-~~~k~~A~~v~~~~~ 243 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAH-EEVKRVADFVTKPVD 243 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCC-HHHHHTCSEEECCGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCc-HHHHHhCCEEeCCCC
Confidence 5888888876543 357999999999999999999999996544 459999999986444
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.81 E-value=5.5e-09 Score=105.45 Aligned_cols=99 Identities=15% Similarity=0.133 Sum_probs=77.6
Q ss_pred HHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCC
Q 002391 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (928)
Q Consensus 725 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (928)
.+|+.|+++|++++|+||++...+..+++.+|+..
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--------------------------------------------- 93 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL--------------------------------------------- 93 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------------------------
Confidence 44999999999999999999999999999999831
Q ss_pred cCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCCcccHHHHHhCC
Q 002391 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEAD 881 (928)
Q Consensus 805 ~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~---~g~~vlaiGDG~ND~~mL~~Ad 881 (928)
++... +.|...++.+.+. ....+++|||+.||++|++.|+
T Consensus 94 -----------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag 136 (195)
T 3n07_A 94 -----------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVA 136 (195)
T ss_dssp -----------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSS
T ss_pred -----------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCC
Confidence 11111 3455555554432 3467999999999999999999
Q ss_pred ccEEecCCchhHHHHhCceeccccc
Q 002391 882 IGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 882 vGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+|++|.+.... ++..||+++.-+.
T Consensus 137 ~~va~~na~~~-~~~~ad~v~~~~~ 160 (195)
T 3n07_A 137 LRVCVADGHPL-LAQRANYVTHIKG 160 (195)
T ss_dssp EEEECTTSCHH-HHHHCSEECSSCT
T ss_pred CEEEECChHHH-HHHhCCEEEcCCC
Confidence 99999765443 8999999987654
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.77 E-value=8.7e-09 Score=109.89 Aligned_cols=59 Identities=25% Similarity=0.336 Sum_probs=48.3
Q ss_pred hhHHHHHHHHhhc---CCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 847 KQKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 847 ~qK~~iV~~l~~~---~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
..|...++.+.+. ....+++|||+.||++|++.|++||+|++.... ++.+||+++.-..
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~~~ 260 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQ-LKDIATSICEDIF 260 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHH-HHHHCSEEECCGG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHH-HHHhhhheeCCCc
Confidence 3588888877654 346799999999999999999999999766544 9999999987444
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.4e-08 Score=103.72 Aligned_cols=109 Identities=12% Similarity=0.162 Sum_probs=83.7
Q ss_pred EEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHH
Q 002391 709 LVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNIL 788 (928)
Q Consensus 709 llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
.+....+.|.+ +|+.|+++|+++.|+||+....+..+++.+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34444555544 9999999999999999999999999999999831
Q ss_pred HHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc---CCCEEE
Q 002391 789 MQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTL 865 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~---~g~~vl 865 (928)
++... +.|..+++.+.+. ....++
T Consensus 118 ---------------------------------------------------~f~~~--k~K~~~l~~~~~~lg~~~~~~~ 144 (211)
T 3ij5_A 118 ---------------------------------------------------LYQGQ--SDKLVAYHELLATLQCQPEQVA 144 (211)
T ss_dssp ---------------------------------------------------EECSC--SSHHHHHHHHHHHHTCCGGGEE
T ss_pred ---------------------------------------------------hhccc--CChHHHHHHHHHHcCcCcceEE
Confidence 11111 4566666665543 346899
Q ss_pred EEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 866 AIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 866 aiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+|||+.||++|++.|++++++.+.... ++..||+++..+.
T Consensus 145 ~vGDs~nDi~~~~~ag~~~a~~~~~~~-~~~~Ad~v~~~~~ 184 (211)
T 3ij5_A 145 YIGDDLIDWPVMAQVGLSVAVADAHPL-LLPKAHYVTRIKG 184 (211)
T ss_dssp EEECSGGGHHHHTTSSEEEECTTSCTT-TGGGSSEECSSCT
T ss_pred EEcCCHHHHHHHHHCCCEEEeCCccHH-HHhhCCEEEeCCC
Confidence 999999999999999999999664433 7889999988663
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=2e-08 Score=100.05 Aligned_cols=105 Identities=12% Similarity=0.035 Sum_probs=80.4
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhh
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMI 798 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (928)
+.+++.++|+.|+++|++++++||++...+..+++.+|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 34456799999999999999999999999999999988731
Q ss_pred hccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCCcccHH
Q 002391 799 KLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDVG 875 (928)
Q Consensus 799 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~---~g~~vlaiGDG~ND~~ 875 (928)
.+.. ...|...++.+.+. ....+++|||+.||++
T Consensus 77 -----------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 113 (180)
T 1k1e_A 77 -----------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLP 113 (180)
T ss_dssp -----------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred -----------------------------------------eecC--CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 1111 13455555544332 2367999999999999
Q ss_pred HHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 876 MIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 876 mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
|++.|++++++.+... .++..||+++.-+.
T Consensus 114 ~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~ 143 (180)
T 1k1e_A 114 AFAACGTSFAVADAPI-YVKNAVDHVLSTHG 143 (180)
T ss_dssp HHHHSSEEEECTTSCH-HHHTTSSEECSSCT
T ss_pred HHHHcCCeEEeCCccH-HHHhhCCEEecCCC
Confidence 9999999999965443 37889999987653
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.70 E-value=1e-07 Score=101.26 Aligned_cols=59 Identities=22% Similarity=0.330 Sum_probs=49.3
Q ss_pred hhHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 847 KQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 847 ~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
..|+..++.+.++.| ..+++|||+.||++|++.|++||+|++.... ++.+||+++.-..
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~~~~ 254 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEK-VQSVADFVTDTVD 254 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHTCSEECCCTT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHH-HHHhcCEeeCCCC
Confidence 369888888876544 5699999999999999999999999776554 9999999987543
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.69 E-value=2.1e-08 Score=107.76 Aligned_cols=64 Identities=20% Similarity=0.267 Sum_probs=50.3
Q ss_pred EEcChh--hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 842 CRVSPK--QKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 842 ~r~~P~--qK~~iV~~l~~~~---g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
....|. .|...++.+.+.. ...+++|||+.||++|++.|++||+|++... .++..||+++.-+.
T Consensus 190 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~-~~~~~a~~v~~~~~ 258 (282)
T 1rkq_A 190 LEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIP-SVKEVANFVTKSNL 258 (282)
T ss_dssp EEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCCTT
T ss_pred EEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcH-HHHhhCCEEecCCC
Confidence 445554 7988888886542 3579999999999999999999999976543 48889999986443
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.68 E-value=4.8e-08 Score=96.91 Aligned_cols=97 Identities=12% Similarity=0.155 Sum_probs=76.9
Q ss_pred HHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCc
Q 002391 726 CIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPH 805 (928)
Q Consensus 726 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (928)
+|+.|+++|+++.++||+....+..+++.+|+.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------------------------- 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------------------------- 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----------------------------------------------
Confidence 999999999999999999999999999999872
Q ss_pred CcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCCcccHHHHHhCCc
Q 002391 806 AAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEADI 882 (928)
Q Consensus 806 ~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~---~g~~vlaiGDG~ND~~mL~~Adv 882 (928)
+++. .+.|...++.+.+. ....+++|||+.||++|++.|++
T Consensus 80 ----------------------------------~~~~--~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~ 123 (176)
T 3mmz_A 80 ----------------------------------VLHG--IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGW 123 (176)
T ss_dssp ----------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred ----------------------------------eEeC--CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCC
Confidence 1111 14566566555443 23679999999999999999999
Q ss_pred cEEecCCchhHHHHhCceeccccc
Q 002391 883 GIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 883 GIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
|+++.+... .++..||+++..+.
T Consensus 124 ~v~~~~~~~-~~~~~ad~v~~~~~ 146 (176)
T 3mmz_A 124 PVAVASAHD-VVRGAARAVTTVPG 146 (176)
T ss_dssp EEECTTCCH-HHHHHSSEECSSCT
T ss_pred eEECCChhH-HHHHhCCEEecCCC
Confidence 999965443 38889999987644
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.68 E-value=2.2e-08 Score=104.70 Aligned_cols=175 Identities=10% Similarity=0.024 Sum_probs=94.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHc-cccccCceEEEEeCCCcc----hHHHHHHHHHHhhHHHHHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC-SLLRQGMKQICITALNSD----SVGKAAKEAVKDNILMQIT 792 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~-gii~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 792 (928)
.+.+.+.++|++|+++| +++++|||+...+..+...+ .++..++..+..++.... .....+.......+...+.
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 101 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVS 101 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHHh
Confidence 46678999999999999 99999999999988887654 334444444433221100 1111111111111111111
Q ss_pred HhhhhhhccCCCcCcEEEEEcCchhhHhhh---HHHHHHHHhhhh--ccCeeEEEEcChh--hHHHHHHHHhhcCCCEEE
Q 002391 793 NASQMIKLERDPHAAYALIIEGKTLAYALE---DDMKHHFLGLAV--ECASVICCRVSPK--QKALVTRLVKEGTGKTTL 865 (928)
Q Consensus 793 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~---~~~~~~~~~~~~--~~~~~v~~r~~P~--qK~~iV~~l~~~~g~~vl 865 (928)
... ...... ........-..+..... ..+...+..... .....-+..+.|. .|+..++.+.+..+ |+
T Consensus 102 ~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g--vi 175 (239)
T 1u02_A 102 DFP-GLRIYR---KNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP--AI 175 (239)
T ss_dssp HST-TCEEEE---ETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC--EE
T ss_pred hCC-CcEEEe---cCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC--eE
Confidence 100 000000 00001110000000000 111111111100 0111123455565 79999999987666 99
Q ss_pred EEcCCcccHHHHHhC--CccEEecCCchhHHHHhCceeccc
Q 002391 866 AIGDGANDVGMIQEA--DIGIGISGVEGMQIVLSGHDMRKC 904 (928)
Q Consensus 866 aiGDG~ND~~mL~~A--dvGIa~~g~e~~~a~~aaD~v~~~ 904 (928)
+|||+.||.+||+.| ++||+|++. +..||+++.-
T Consensus 176 a~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 176 IAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp EEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred EEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 999999999999999 999999765 4678988765
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.65 E-value=5.7e-08 Score=102.20 Aligned_cols=63 Identities=14% Similarity=0.106 Sum_probs=48.9
Q ss_pred EcCh-hhHHHHHHHHhhc----CCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceecccc
Q 002391 843 RVSP-KQKALVTRLVKEG----TGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCI 905 (928)
Q Consensus 843 r~~P-~qK~~iV~~l~~~----~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~ 905 (928)
.+.| -.|+..++.+.+. ....|++|||+.||++||+.|++||+|++......+..||+++.-+
T Consensus 173 ei~~g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~~ 240 (249)
T 2zos_A 173 TVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVLE 240 (249)
T ss_dssp EEECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHHH
T ss_pred EEeCCCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEeccc
Confidence 3444 4598888888764 3367999999999999999999999997765333677889887644
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.60 E-value=4.9e-08 Score=103.92 Aligned_cols=64 Identities=19% Similarity=0.306 Sum_probs=50.0
Q ss_pred EEcChh--hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 842 CRVSPK--QKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 842 ~r~~P~--qK~~iV~~l~~~~---g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
....|. .|...++.+.+.. ...+++|||+.||++|++.|++||+|++... .++..||+++.-..
T Consensus 182 ~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~~~ 250 (268)
T 1nf2_A 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIE-KVKEASDIVTLTNN 250 (268)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCH-HHHHHCSEECCCTT
T ss_pred EEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCH-HHHhhCCEEEccCC
Confidence 345554 6988888876542 3579999999999999999999999976543 47888999987543
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.59 E-value=1.2e-07 Score=104.48 Aligned_cols=124 Identities=21% Similarity=0.228 Sum_probs=85.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.+++.++++.|+++|+++.|+||+....+..++..+|+...-...+.+...
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~--------------------------- 230 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSG--------------------------- 230 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCC---------------------------
Confidence 68899999999999999999999999999999999999984211111111000
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCCcccH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDV 874 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~---~g~~vlaiGDG~ND~ 874 (928)
.++|.... --..++.|...++.+.+. ....++|||||.||+
T Consensus 231 -------------~~tg~~~~-----------------------~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi 274 (335)
T 3n28_A 231 -------------KLTGQVLG-----------------------EVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDL 274 (335)
T ss_dssp -------------EEEEEEES-----------------------CCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred -------------eeeeeecc-----------------------cccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHH
Confidence 00110000 001234455555544332 346799999999999
Q ss_pred HHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 875 GMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 875 ~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+|++.||+||+|.+.+. ++..||+++...+
T Consensus 275 ~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~ 304 (335)
T 3n28_A 275 VMMAAAGLGVAYHAKPK--VEAKAQTAVRFAG 304 (335)
T ss_dssp HHHHHSSEEEEESCCHH--HHTTSSEEESSSC
T ss_pred HHHHHCCCeEEeCCCHH--HHhhCCEEEecCC
Confidence 99999999999944443 8899999987655
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.57 E-value=4.8e-08 Score=105.90 Aligned_cols=64 Identities=13% Similarity=0.176 Sum_probs=50.7
Q ss_pred EEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceecc-ccc
Q 002391 842 CRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRK-CIQ 906 (928)
Q Consensus 842 ~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~-~~~ 906 (928)
....|. .|...++.+.+..| ..+++|||+.||++|++.|++||+|++... .++..||+++. -..
T Consensus 216 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~~~ 285 (301)
T 2b30_A 216 AEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLPVSHR 285 (301)
T ss_dssp EEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECSSCTT
T ss_pred eEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcH-HHHhhCCEEEccCCC
Confidence 344454 69988888876543 479999999999999999999999976544 38889999987 443
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.54 E-value=8.9e-08 Score=96.30 Aligned_cols=99 Identities=13% Similarity=0.113 Sum_probs=75.7
Q ss_pred HHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCc
Q 002391 726 CIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPH 805 (928)
Q Consensus 726 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (928)
+|+.|+++|+++.++||++...+..+++.+|+..
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~---------------------------------------------- 87 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH---------------------------------------------- 87 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc----------------------------------------------
Confidence 3999999999999999999999999999998832
Q ss_pred CcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEc--ChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCcc
Q 002391 806 AAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRV--SPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIG 883 (928)
Q Consensus 806 ~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~--~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvG 883 (928)
++... .|+-...+++.+.- ....+++|||+.||++|++.|+++
T Consensus 88 ----------------------------------~~~~~kpk~~~~~~~~~~~~~-~~~~~~~vGD~~~Di~~~~~ag~~ 132 (191)
T 3n1u_A 88 ----------------------------------YYKGQVDKRSAYQHLKKTLGL-NDDEFAYIGDDLPDLPLIQQVGLG 132 (191)
T ss_dssp ----------------------------------EECSCSSCHHHHHHHHHHHTC-CGGGEEEEECSGGGHHHHHHSSEE
T ss_pred ----------------------------------ceeCCCChHHHHHHHHHHhCC-CHHHEEEECCCHHHHHHHHHCCCE
Confidence 11111 22333344444443 456799999999999999999999
Q ss_pred EEecCCchhHHHHhCceeccccc
Q 002391 884 IGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 884 Ia~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+++.+... .++..||+++.-+.
T Consensus 133 ~~~~~~~~-~~~~~ad~v~~~~~ 154 (191)
T 3n1u_A 133 VAVSNAVP-QVLEFADWRTERTG 154 (191)
T ss_dssp EECTTCCH-HHHHHSSEECSSCT
T ss_pred EEeCCccH-HHHHhCCEEecCCC
Confidence 99966543 38899999988654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.53 E-value=3.7e-07 Score=97.24 Aligned_cols=59 Identities=19% Similarity=0.154 Sum_probs=48.1
Q ss_pred hhHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 847 KQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 847 ~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
..|...++.+.+..| ..+++|||+.||++|++.|++||+|++... .++..||+++.-..
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~~ 251 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAE-NIKQIARYATDDNN 251 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccH-HHHHhCCeeCcCCC
Confidence 378888888765433 579999999999999999999999976544 38899999987544
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=4.1e-07 Score=96.18 Aligned_cols=56 Identities=13% Similarity=0.157 Sum_probs=46.5
Q ss_pred hhHHHHHHHHhhcCC-----CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 847 KQKALVTRLVKEGTG-----KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 847 ~qK~~iV~~l~~~~g-----~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
..|...++.+.+..+ ..+++|||+.||++|++.|++||+|++... + .+++++..+.
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~~~ 235 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPAPG 235 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSSCH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCCCC
Confidence 588888888876544 679999999999999999999999987665 3 7788887544
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.48 E-value=1.1e-06 Score=94.44 Aligned_cols=64 Identities=19% Similarity=0.282 Sum_probs=49.9
Q ss_pred EEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 842 CRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 842 ~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
....|. .|+..++.+.+..| ..+++|||+.||++|++.|++||+|++... .++..||+++.-..
T Consensus 208 lei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~-~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 208 FELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARE-DIKSIADAVTLTND 276 (288)
T ss_dssp EEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred EEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCH-HHHhhCceeecCCC
Confidence 344443 68888888876543 579999999999999999999999976543 48889999987544
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=8.4e-07 Score=85.11 Aligned_cols=107 Identities=16% Similarity=0.311 Sum_probs=77.2
Q ss_pred cCChhHHHHHHHHHHC-CcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccch
Q 002391 551 AESPDEAAFLVAAREF-GFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGAD 629 (928)
Q Consensus 551 ~~sp~e~Al~~~a~~~-g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 629 (928)
++||...|++++|+.. |+.... .... .....+|++..++..|.+ +| ..+.+|++
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~------------------~~~~--~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~ 103 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERD------------------VQSL--HATFVPFTAQSRMSGINI---DN--RMIRKGSV 103 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCC------------------HHHH--TCEEEEEETTTTEEEEEE---TT--EEEEEEEH
T ss_pred CCCHHHHHHHHHHHHhcCCCccc------------------cccc--ccceeeccccCCCCeEEE---CC--EEEEEeCc
Confidence 5799999999999976 643211 0000 012357888877777744 45 45778999
Q ss_pred hhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEE
Q 002391 630 SIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLIL 709 (928)
Q Consensus 630 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~l 709 (928)
..|...+...+-.....+.+.+++++.+|.+++++| .|..+
T Consensus 104 ~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA---------------------------------------~d~~l 144 (156)
T 1svj_A 104 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRV 144 (156)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEE---------------------------------------ETTEE
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEE---------------------------------------ECCEE
Confidence 888777765443344457788899999999999999 35679
Q ss_pred EeeeeecccCCC
Q 002391 710 VGATAVEDKLQK 721 (928)
Q Consensus 710 lG~~~i~D~lr~ 721 (928)
+|++++.|++|+
T Consensus 145 ~GvIalaD~iK~ 156 (156)
T 1svj_A 145 LGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEecCCCC
Confidence 999999999986
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=4.6e-07 Score=91.73 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=81.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.+++.++++.|++.|+++.++||+....+..+...+|+...-...+.... .
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------------------- 128 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKD-G-------------------------- 128 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET-T--------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEEC-C--------------------------
Confidence 5678999999999999999999999998888777777776210000000000 0
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEE-cChhhHHHHHHHHhhcC---CCEEEEEcCCccc
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGT---GKTTLAIGDGAND 873 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r-~~P~qK~~iV~~l~~~~---g~~vlaiGDG~ND 873 (928)
.++|. +... ..+..|...+..+.+.. ...+++|||+.||
T Consensus 129 -------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~D 171 (211)
T 1l7m_A 129 -------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGAND 171 (211)
T ss_dssp -------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred -------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHEEEEecChhH
Confidence 00000 0001 12356766665554332 3569999999999
Q ss_pred HHHHHhCCccEEecCCchhHHHHhCceeccc
Q 002391 874 VGMIQEADIGIGISGVEGMQIVLSGHDMRKC 904 (928)
Q Consensus 874 ~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~ 904 (928)
++|++.|+++++|.+.+ ..+..||+++.-
T Consensus 172 i~~~~~ag~~~~~~~~~--~~~~~a~~v~~~ 200 (211)
T 1l7m_A 172 ISMFKKAGLKIAFCAKP--ILKEKADICIEK 200 (211)
T ss_dssp HHHHHHCSEEEEESCCH--HHHTTCSEEECS
T ss_pred HHHHHHCCCEEEECCCH--HHHhhcceeecc
Confidence 99999999999997433 367889998764
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=4.6e-07 Score=88.43 Aligned_cols=98 Identities=16% Similarity=0.035 Sum_probs=75.4
Q ss_pred HHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCc
Q 002391 726 CIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPH 805 (928)
Q Consensus 726 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (928)
+|+.|+++|+++.++||++...+..+++.+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999998831
Q ss_pred CcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCCcccHHHHHhCCc
Q 002391 806 AAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEADI 882 (928)
Q Consensus 806 ~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~---~g~~vlaiGDG~ND~~mL~~Adv 882 (928)
.+... +.|...++.+.+. ....+++|||+.||++|++.|++
T Consensus 73 ----------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~ 116 (164)
T 3e8m_A 73 ----------------------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGI 116 (164)
T ss_dssp ----------------------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSE
T ss_pred ----------------------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence 11111 3344444443332 34679999999999999999999
Q ss_pred cEEecCCchhHHHHhCceeccccc
Q 002391 883 GIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 883 GIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
++++.+... .++..||+++..+.
T Consensus 117 ~~~~~~~~~-~~~~~ad~v~~~~~ 139 (164)
T 3e8m_A 117 AGVPASAPF-YIRRLSTIFLEKRG 139 (164)
T ss_dssp EECCTTSCH-HHHTTCSSCCCCCT
T ss_pred eEEcCChHH-HHHHhCcEEeccCC
Confidence 999955443 38899999987654
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.39 E-value=9.2e-07 Score=100.39 Aligned_cols=131 Identities=20% Similarity=0.281 Sum_probs=93.7
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.+++.+.++.|++.|+++.++||.....+..+++.+|+-..-...+.+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~------------------------------ 305 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEI------------------------------ 305 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEE------------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEE------------------------------
Confidence 78999999999999999999999999999999999999983211000000
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEE-----cChhhHHHHHHHHhhcC---CCEEEEEcC
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-----VSPKQKALVTRLVKEGT---GKTTLAIGD 869 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r-----~~P~qK~~iV~~l~~~~---g~~vlaiGD 869 (928)
.+| .+..+ ..++.|..+++.+.+.. ...+++|||
T Consensus 306 --------------~dg------------------------~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD 347 (415)
T 3p96_A 306 --------------VDG------------------------TLTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGD 347 (415)
T ss_dssp --------------ETT------------------------EEEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEEC
T ss_pred --------------eCC------------------------EEEeeEccCCCCCcchHHHHHHHHHHcCcChhhEEEEEC
Confidence 111 01111 12556776666665432 357999999
Q ss_pred CcccHHHHHhCCccEEecCCchhHHHHhCceeccccc----ccccccchhhHH
Q 002391 870 GANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ----VFAFDIADCSLK 918 (928)
Q Consensus 870 G~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~----~~~~~~~~~~~~ 918 (928)
|.||++|++.||+|+++.+.+. ++..||++...+. +.++.+++....
T Consensus 348 ~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~~~l~~ll~~l~~~~~~~~ 398 (415)
T 3p96_A 348 GANDIDMLAAAGLGIAFNAKPA--LREVADASLSHPYLDTVLFLLGVTRGEIE 398 (415)
T ss_dssp SGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECSSCTTHHHHHTTCCHHHHH
T ss_pred CHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEccCCHHHHHHHhCCCHHHHH
Confidence 9999999999999999944433 8889999977555 335566665443
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.39 E-value=8.2e-07 Score=90.55 Aligned_cols=124 Identities=17% Similarity=0.178 Sum_probs=86.0
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhh
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
-++.+++.+.++.|++.|++++++|+.....+..+...+|+...-...+.....
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND-------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC--------------------------
Confidence 358899999999999999999999999999998898888874311111111000
Q ss_pred hhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEE-cChhhHHHHHHHHhhc---CCCEEEEEcCCcc
Q 002391 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEG---TGKTTLAIGDGAN 872 (928)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r-~~P~qK~~iV~~l~~~---~g~~vlaiGDG~N 872 (928)
.++| .+... .....|..+++.+.+. ....+++|||+.|
T Consensus 128 --------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~ 169 (217)
T 3m1y_A 128 --------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGAN 169 (217)
T ss_dssp --------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGG
T ss_pred --------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHH
Confidence 0000 01111 1234566666655443 3467999999999
Q ss_pred cHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 873 DVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 873 D~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
|++|++.|++++++.+.+. .+..||+++..++
T Consensus 170 Di~~a~~aG~~~~~~~~~~--l~~~ad~v~~~~d 201 (217)
T 3m1y_A 170 DLSMFKHAHIKIAFNAKEV--LKQHATHCINEPD 201 (217)
T ss_dssp GHHHHTTCSEEEEESCCHH--HHTTCSEEECSSB
T ss_pred HHHHHHHCCCeEEECccHH--HHHhcceeecccC
Confidence 9999999999999933333 8899999987555
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.38 E-value=3.8e-07 Score=91.61 Aligned_cols=110 Identities=18% Similarity=0.217 Sum_probs=82.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.+++.+.++.|++.|++++++||.....+..+ +.+|+-.. ...+....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~---------------------------- 128 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFED---------------------------- 128 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEET----------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeC----------------------------
Confidence 7889999999999999999999999998888777 77776322 11111100
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL 877 (928)
+ ........|..|...++.+ ....+++|||+.||+.|+
T Consensus 129 ----------------~-----------------------~~~~~~~~~~~k~~~l~~l---~~~~~i~iGD~~~Di~~~ 166 (201)
T 4ap9_A 129 ----------------G-----------------------KFQGIRLRFRDKGEFLKRF---RDGFILAMGDGYADAKMF 166 (201)
T ss_dssp ----------------T-----------------------EEEEEECCSSCHHHHHGGG---TTSCEEEEECTTCCHHHH
T ss_pred ----------------C-----------------------ceECCcCCccCHHHHHHhc---CcCcEEEEeCCHHHHHHH
Confidence 0 0011345567898888877 356799999999999999
Q ss_pred HhCCccEEecCCchhHHHHhCceeccc
Q 002391 878 QEADIGIGISGVEGMQIVLSGHDMRKC 904 (928)
Q Consensus 878 ~~AdvGIa~~g~e~~~a~~aaD~v~~~ 904 (928)
+.|++||+|.+... .||+++..
T Consensus 167 ~~ag~~v~~~~~~~-----~ad~v~~~ 188 (201)
T 4ap9_A 167 ERADMGIAVGREIP-----GADLLVKD 188 (201)
T ss_dssp HHCSEEEEESSCCT-----TCSEEESS
T ss_pred HhCCceEEECCCCc-----cccEEEcc
Confidence 99999999966543 78888763
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=6.4e-07 Score=93.83 Aligned_cols=64 Identities=19% Similarity=0.352 Sum_probs=49.3
Q ss_pred EEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHh-------Cceeccccc
Q 002391 842 CRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLS-------GHDMRKCIQ 906 (928)
Q Consensus 842 ~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~a-------aD~v~~~~~ 906 (928)
....|. .|...++.+.+..+ ..+++|||+.||++|++.|++||+|++... .++.. ||+++.-+.
T Consensus 154 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~-~~k~~a~~~~~~a~~v~~~~~ 229 (244)
T 1s2o_A 154 VDLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQP-ELLHWYDQWGDSRHYRAQSSH 229 (244)
T ss_dssp EEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCH-HHHHHHHHHCCTTEEECSSCH
T ss_pred EEeccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcH-HHHHHHhcccccceeecCCcc
Confidence 344554 69888888876543 579999999999999999999999966543 37774 889987544
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.34 E-value=4.6e-06 Score=86.37 Aligned_cols=174 Identities=16% Similarity=0.132 Sum_probs=94.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccc----cCceEEEEeCC-----CcchHHHHHHHHHHhhHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR----QGMKQICITAL-----NSDSVGKAAKEAVKDNIL 788 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~----~~~~~i~~~~~-----~~~~~~~~~~~~~~~~~~ 788 (928)
.+.+.+.++|++|+++|++++++|||+...+..+...+|+-. .++..+..++. ..+.....+.....
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~---- 95 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRK---- 95 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHH----
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHH----
Confidence 467788999999999999999999999999999988887521 12211111110 00111111111100
Q ss_pred HHHHHhhhhhhc---cCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCee---EEEEcCh--hhHHHHHHHHhhcC
Q 002391 789 MQITNASQMIKL---ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASV---ICCRVSP--KQKALVTRLVKEGT 860 (928)
Q Consensus 789 ~~~~~~~~~~~~---~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~---v~~r~~P--~qK~~iV~~l~~~~ 860 (928)
. ...+.. ....... +.+.+... ..+...............+ .+....| ..|...++.+.+..
T Consensus 96 ----~-~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~ 165 (231)
T 1wr8_A 96 ----R-FPNARTSYTMPDRRAG--LVIMRETI---NVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFL 165 (231)
T ss_dssp ----H-CTTCCBCTTGGGCSSC--EEECTTTS---CHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHH
T ss_pred ----h-CCCceEEecCCCceee--EEEECCCC---CHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHc
Confidence 0 000000 0000001 12212000 0111111111111111111 1223334 36888887776542
Q ss_pred ---CCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 861 ---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 861 ---g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
...+++|||+.||++|++.|++||+|++... .++..||+++.-+.
T Consensus 166 ~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~-~~~~~a~~v~~~~~ 213 (231)
T 1wr8_A 166 GIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPK-ILKENADYVTKKEY 213 (231)
T ss_dssp TSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHTTCSEECSSCH
T ss_pred CCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCH-HHHhhCCEEecCCC
Confidence 3579999999999999999999999966543 37888999987543
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.5e-06 Score=94.52 Aligned_cols=123 Identities=17% Similarity=0.164 Sum_probs=84.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.+++.++++.|++.|+++.++||.....+..+++.+|+...-...+.....
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg--------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN--------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------------------
Confidence 48899999999999999999999999999999999999984211111111000
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEE-EcChhhHHHHHHHHhhc---CCCEEEEEcCCccc
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICC-RVSPKQKALVTRLVKEG---TGKTTLAIGDGAND 873 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~-r~~P~qK~~iV~~l~~~---~g~~vlaiGDG~ND 873 (928)
..+|. +.. -..++.|..+++.+.+. ....+++|||+.||
T Consensus 232 -------------~~tg~------------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~D 274 (317)
T 4eze_A 232 -------------VLTDN------------------------ITLPIMNAANKKQTLVDLAARLNIATENIIACGDGAND 274 (317)
T ss_dssp -------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred -------------eeeee------------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHH
Confidence 00000 000 01234565555554332 33679999999999
Q ss_pred HHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 874 VGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 874 ~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
++|++.||+|+++.+.+. .+..+|.+....+
T Consensus 275 i~aa~~AG~~va~~~~~~--~~~~a~~~i~~~~ 305 (317)
T 4eze_A 275 LPMLEHAGTGIAWKAKPV--VREKIHHQINYHG 305 (317)
T ss_dssp HHHHHHSSEEEEESCCHH--HHHHCCEEESSSC
T ss_pred HHHHHHCCCeEEeCCCHH--HHHhcCeeeCCCC
Confidence 999999999999944333 7788898876555
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=9.7e-07 Score=88.40 Aligned_cols=99 Identities=9% Similarity=0.130 Sum_probs=73.8
Q ss_pred HHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCC
Q 002391 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (928)
Q Consensus 725 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (928)
.+|+.|+++|++++++||++...+..+++.+|+..
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~--------------------------------------------- 94 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH--------------------------------------------- 94 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce---------------------------------------------
Confidence 38999999999999999999999999999888731
Q ss_pred cCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCCcccHHHHHhCC
Q 002391 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEAD 881 (928)
Q Consensus 805 ~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~---~g~~vlaiGDG~ND~~mL~~Ad 881 (928)
++.. .+.|...++.+.+. ....+++|||+.||+.|++.|+
T Consensus 95 -----------------------------------~~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag 137 (188)
T 2r8e_A 95 -----------------------------------LYQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVG 137 (188)
T ss_dssp -----------------------------------EECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSS
T ss_pred -----------------------------------eecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCC
Confidence 1111 12334444444322 2357999999999999999999
Q ss_pred ccEEecCCchhHHHHhCceeccccc
Q 002391 882 IGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 882 vGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+++++.+... .++..||+++..+.
T Consensus 138 ~~~~~~~~~~-~~~~~ad~v~~~~~ 161 (188)
T 2r8e_A 138 LSVAVADAHP-LLIPRADYVTRIAG 161 (188)
T ss_dssp EEEECTTSCT-TTGGGSSEECSSCT
T ss_pred CEEEecCcCH-HHHhcCCEEEeCCC
Confidence 9999864332 36778999988764
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.24 E-value=1.7e-06 Score=92.25 Aligned_cols=40 Identities=8% Similarity=0.087 Sum_probs=36.3
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
.+-+.+.++|++|+++|++++++|||....+..+...+++
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 65 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 65 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 3557899999999999999999999999999999998875
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.24 E-value=2.8e-07 Score=97.53 Aligned_cols=58 Identities=21% Similarity=0.329 Sum_probs=46.4
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 848 QKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 848 qK~~iV~~l~~~~---g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
.|...++.+.+.. ...+++|||+.||++|++.|++||+|++... .++..||+++.-..
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~~~ 247 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKE-DVKAAADYVTAPID 247 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCCGG
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccH-HHHhhCCEEeccCc
Confidence 6887777776543 3579999999999999999999999966544 47889999987544
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.17 E-value=5.7e-06 Score=80.38 Aligned_cols=104 Identities=12% Similarity=0.084 Sum_probs=76.4
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhh
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMI 798 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (928)
+.+++.++|+.|++.|++++++||+....+..+.+.+|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 34667899999999999999999999999999999888731
Q ss_pred hccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHH----HHHHhhcCCCEEEEEcCCcccH
Q 002391 799 KLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALV----TRLVKEGTGKTTLAIGDGANDV 874 (928)
Q Consensus 799 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~i----V~~l~~~~g~~vlaiGDG~ND~ 874 (928)
.+.. +..|... ++.+.- ....+++|||+.||+
T Consensus 78 -----------------------------------------~~~~--~kp~~~~~~~~~~~~~~-~~~~~~~vGD~~~Di 113 (162)
T 2p9j_A 78 -----------------------------------------IYTG--SYKKLEIYEKIKEKYSL-KDEEIGFIGDDVVDI 113 (162)
T ss_dssp -----------------------------------------EEEC--C--CHHHHHHHHHHTTC-CGGGEEEEECSGGGH
T ss_pred -----------------------------------------hccC--CCCCHHHHHHHHHHcCC-CHHHEEEECCCHHHH
Confidence 0101 1122222 333322 345799999999999
Q ss_pred HHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 875 GMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 875 ~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
.|.+.|++++++.+... ..+..||+++.-+.
T Consensus 114 ~~a~~ag~~~~~~~~~~-~~~~~a~~v~~~~~ 144 (162)
T 2p9j_A 114 EVMKKVGFPVAVRNAVE-EVRKVAVYITQRNG 144 (162)
T ss_dssp HHHHHSSEEEECTTSCH-HHHHHCSEECSSCS
T ss_pred HHHHHCCCeEEecCccH-HHHhhCCEEecCCC
Confidence 99999999998854433 37778999987554
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.17 E-value=6.6e-06 Score=83.43 Aligned_cols=126 Identities=17% Similarity=0.213 Sum_probs=78.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
.+.+++.+.++.|++.|++++++||.....+..+.+.+|+.... .+..
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~------------------------------ 129 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFAV------------------------------ 129 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEEE------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEEe------------------------------
Confidence 37899999999999999999999999999999999988873211 1100
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL 877 (928)
.++.++.... ..+......|..|...+..........+++|||+.||++|+
T Consensus 130 -----------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~ 180 (219)
T 3kd3_A 130 -----------ETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLY 180 (219)
T ss_dssp -----------EEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHH
T ss_pred -----------eeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHH
Confidence 0011000000 00011113345565555544222568899999999999999
Q ss_pred Hh--CCccEEec-CCchhHHHHhCceeccc
Q 002391 878 QE--ADIGIGIS-GVEGMQIVLSGHDMRKC 904 (928)
Q Consensus 878 ~~--AdvGIa~~-g~e~~~a~~aaD~v~~~ 904 (928)
++ +.+||+++ +......+..+|+++..
T Consensus 181 ~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~ 210 (219)
T 3kd3_A 181 EKGYATKFIAYMEHIEREKVINLSKYVARN 210 (219)
T ss_dssp HHTSCSEEEEECSSCCCHHHHHHCSEEESS
T ss_pred hCCCCcEEEeccCccccHHHHhhcceeeCC
Confidence 75 22344442 22333367889998764
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=5.1e-07 Score=95.65 Aligned_cols=60 Identities=15% Similarity=0.200 Sum_probs=46.9
Q ss_pred EcChh--hHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHhCC-ccEEecCCchhHHHHhCceecc
Q 002391 843 RVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEAD-IGIGISGVEGMQIVLSGHDMRK 903 (928)
Q Consensus 843 r~~P~--qK~~iV~~l~~~~g~~vlaiGD----G~ND~~mL~~Ad-vGIa~~g~e~~~a~~aaD~v~~ 903 (928)
.+.|. .|+..++.+.......|++||| |.||++||+.|+ +|++|++. ...++..||+++.
T Consensus 190 eI~~~~vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA-~~~~k~~a~~v~~ 256 (262)
T 2fue_A 190 DVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSP-QDTVQRCREIFFP 256 (262)
T ss_dssp EEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSH-HHHHHHHHHHHCT
T ss_pred EEecCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCC-CHHHHHhhheeCC
Confidence 44443 5988888882114478999999 999999999999 59999554 4459999999875
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.12 E-value=8.8e-06 Score=83.91 Aligned_cols=109 Identities=15% Similarity=0.048 Sum_probs=75.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
.+.+++.+.|+.|++.|+++.++||.....+..+++.+|+..--...+.....
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------------------------- 144 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDG--------------------------- 144 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETT---------------------------
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECC---------------------------
Confidence 57899999999999999999999999999999999999983100000000000
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEE-EEcChhhHHHHHHHHhhcCC------CEEEEEcCC
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVIC-CRVSPKQKALVTRLVKEGTG------KTTLAIGDG 870 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~-~r~~P~qK~~iV~~l~~~~g------~~vlaiGDG 870 (928)
..+|. +. ....+..|...++.+.+..+ ..+++|||+
T Consensus 145 -------------~~~g~------------------------~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs 187 (232)
T 3fvv_A 145 -------------RYTGR------------------------IEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDS 187 (232)
T ss_dssp -------------EEEEE------------------------EESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECC
T ss_pred -------------EEeee------------------------ecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCC
Confidence 00010 00 01224567666655543233 689999999
Q ss_pred cccHHHHHhCCccEEecCCc
Q 002391 871 ANDVGMIQEADIGIGISGVE 890 (928)
Q Consensus 871 ~ND~~mL~~AdvGIa~~g~e 890 (928)
.||++|++.|++++++....
T Consensus 188 ~~D~~~~~~ag~~~~~~~~~ 207 (232)
T 3fvv_A 188 VNDVPLLEAVTRPIAANPSP 207 (232)
T ss_dssp GGGHHHHHHSSEEEEESCCH
T ss_pred HhhHHHHHhCCCeEEECcCH
Confidence 99999999999999995443
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.07 E-value=7.5e-06 Score=89.87 Aligned_cols=59 Identities=17% Similarity=0.142 Sum_probs=46.5
Q ss_pred hhhHHHHHHHHhhc-CCCEEEEEcCCcccHHHHHhC----CccEEecCCchhHHHHhCceeccccc
Q 002391 846 PKQKALVTRLVKEG-TGKTTLAIGDGANDVGMIQEA----DIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 846 P~qK~~iV~~l~~~-~g~~vlaiGDG~ND~~mL~~A----dvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+.+|+..++-+... ....|++||||.||++|++.| ++||+| +... .++.+||+++.-++
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~-~lk~~Ad~v~~~~~ 268 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNE-YALKHADVVIISPT 268 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCH-HHHTTCSEEEECSS
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCH-HHHhhCcEEecCCC
Confidence 56798888866531 114499999999999999999 999999 6543 48999999987543
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=4.4e-06 Score=84.41 Aligned_cols=113 Identities=13% Similarity=0.036 Sum_probs=77.7
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccC--ceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQG--MKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (928)
.+.+++.+.++.|++.|++++++|+.....+..+...+|+...- ..
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~-------------------------------- 117 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD-------------------------------- 117 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG--------------------------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce--------------------------------
Confidence 56799999999999999999999999998888888888873211 00
Q ss_pred hhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcCh--hhHHHHHHHHhhcCCCEEEEEcCCccc
Q 002391 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEGTGKTTLAIGDGAND 873 (928)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P--~qK~~iV~~l~~~~g~~vlaiGDG~ND 873 (928)
++++.. ....| .--..+.+.+.- ....+++|||+.||
T Consensus 118 ---------------i~~~~~-------------------------~~~kp~~~~~~~~~~~~g~-~~~~~i~iGD~~~D 156 (205)
T 3m9l_A 118 ---------------VLGRDE-------------------------APPKPHPGGLLKLAEAWDV-SPSRMVMVGDYRFD 156 (205)
T ss_dssp ---------------EECTTT-------------------------SCCTTSSHHHHHHHHHTTC-CGGGEEEEESSHHH
T ss_pred ---------------EEeCCC-------------------------CCCCCCHHHHHHHHHHcCC-CHHHEEEECCCHHH
Confidence 000000 00111 111223333322 34679999999999
Q ss_pred HHHHHhCCc-cEEecCCchhHHHHhCceeccc
Q 002391 874 VGMIQEADI-GIGISGVEGMQIVLSGHDMRKC 904 (928)
Q Consensus 874 ~~mL~~Adv-GIa~~g~e~~~a~~aaD~v~~~ 904 (928)
+.|.+.||+ +|+|.+... ..+..||+++..
T Consensus 157 i~~a~~aG~~~i~v~~~~~-~~~~~ad~v~~~ 187 (205)
T 3m9l_A 157 LDCGRAAGTRTVLVNLPDN-PWPELTDWHARD 187 (205)
T ss_dssp HHHHHHHTCEEEECSSSSC-SCGGGCSEECSS
T ss_pred HHHHHHcCCEEEEEeCCCC-cccccCCEEeCC
Confidence 999999999 999965433 256779998763
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=4.2e-06 Score=87.62 Aligned_cols=49 Identities=20% Similarity=0.318 Sum_probs=40.2
Q ss_pred hHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHhCC-ccEEecCCchhHHHHhC
Q 002391 848 QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEAD-IGIGISGVEGMQIVLSG 898 (928)
Q Consensus 848 qK~~iV~~l~~~~g~~vlaiGD----G~ND~~mL~~Ad-vGIa~~g~e~~~a~~aa 898 (928)
.|+..++.+.+ ....|+|||| |.||.+||+.|+ +|++|++.+.. ++..+
T Consensus 187 ~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~-~~~~~ 240 (246)
T 3f9r_A 187 DKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDT-IAEVE 240 (246)
T ss_dssp SGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHH-HHHHH
T ss_pred CHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHH-HHHHH
Confidence 69999999987 7789999999 799999999996 89999765443 44443
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.02 E-value=1.9e-05 Score=80.41 Aligned_cols=117 Identities=11% Similarity=0.053 Sum_probs=76.1
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
.+.+++.+.++.|++.|++++++|+.....+..+....|+...-...+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~-------------------------------- 141 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALA-------------------------------- 141 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEE--------------------------------
Confidence 456899999999999999999999998887777777777632111111
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL 877 (928)
.+.... ...-.|.--..+.+.+.- ....+++|||+.||+.|+
T Consensus 142 ---------------~~~~~~----------------------~~kp~~~~~~~~~~~~~i-~~~~~i~iGD~~nDi~~a 183 (226)
T 1te2_A 142 ---------------SAEKLP----------------------YSKPHPQVYLDCAAKLGV-DPLTCVALEDSVNGMIAS 183 (226)
T ss_dssp ---------------ECTTSS----------------------CCTTSTHHHHHHHHHHTS-CGGGEEEEESSHHHHHHH
T ss_pred ---------------eccccC----------------------CCCCChHHHHHHHHHcCC-CHHHeEEEeCCHHHHHHH
Confidence 000000 000012222333444432 446799999999999999
Q ss_pred HhCCccEEe----cCCchhHHHHhCceecccc
Q 002391 878 QEADIGIGI----SGVEGMQIVLSGHDMRKCI 905 (928)
Q Consensus 878 ~~AdvGIa~----~g~e~~~a~~aaD~v~~~~ 905 (928)
+.|++++++ .+... ..+..||+++.-.
T Consensus 184 ~~aG~~~~~~~~~~~~~~-~~~~~a~~v~~~~ 214 (226)
T 1te2_A 184 KAARMRSIVVPAPEAQND-PRFVLANVKLSSL 214 (226)
T ss_dssp HHTTCEEEECCCTTTTTC-GGGGGSSEECSCG
T ss_pred HHcCCEEEEEcCCCCccc-ccccccCeEECCH
Confidence 999999988 32222 2567889887643
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.5e-05 Score=81.94 Aligned_cols=115 Identities=15% Similarity=0.131 Sum_probs=71.8
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.+++.+.++.|++.|+++.++|+... +..+...+|+...-..
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~---------------------------------- 135 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA---------------------------------- 135 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE----------------------------------
Confidence 4789999999999999999999999754 6667777776321111
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL 877 (928)
++.+... -...-.|.--..+.+.+.- ....+++|||+.||+.|.
T Consensus 136 -------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~lgi-~~~~~i~vGDs~~Di~~a 179 (233)
T 3nas_A 136 -------------IVDPTTL----------------------AKGKPDPDIFLTAAAMLDV-SPADCAAIEDAEAGISAI 179 (233)
T ss_dssp -------------ECCC-------------------------------CCHHHHHHHHHTS-CGGGEEEEECSHHHHHHH
T ss_pred -------------EeeHhhC----------------------CCCCCChHHHHHHHHHcCC-CHHHEEEEeCCHHHHHHH
Confidence 1111000 0000111112334444443 456799999999999999
Q ss_pred HhCCccEEecCCchhHHHHhCceeccccc
Q 002391 878 QEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 878 ~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+.||+++++.+.... .+ .||+++.-..
T Consensus 180 ~~aG~~~~~~~~~~~-~~-~ad~v~~s~~ 206 (233)
T 3nas_A 180 KSAGMFAVGVGQGQP-ML-GADLVVRQTS 206 (233)
T ss_dssp HHTTCEEEECC---------CSEECSSGG
T ss_pred HHcCCEEEEECCccc-cc-cCCEEeCChH
Confidence 999999998665432 44 8999987544
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.02 E-value=9.5e-06 Score=83.76 Aligned_cols=118 Identities=19% Similarity=0.220 Sum_probs=78.9
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhh
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
..+.+++.+.++.|++.|++++++|+.....+..+...+|+...-..
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 149 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--------------------------------- 149 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee---------------------------------
Confidence 35789999999999999999999999999888888888887422111
Q ss_pred hhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHH
Q 002391 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (928)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~m 876 (928)
++.+..... ..-.|+--..+++.+.- ....+++|||+.||+.|
T Consensus 150 --------------~~~~~~~~~----------------------~kp~~~~~~~~~~~lg~-~~~~~i~vGD~~~Di~~ 192 (237)
T 4ex6_A 150 --------------IAGDDSVER----------------------GKPHPDMALHVARGLGI-PPERCVVIGDGVPDAEM 192 (237)
T ss_dssp --------------EECTTTSSS----------------------CTTSSHHHHHHHHHHTC-CGGGEEEEESSHHHHHH
T ss_pred --------------EEeCCCCCC----------------------CCCCHHHHHHHHHHcCC-CHHHeEEEcCCHHHHHH
Confidence 111111000 00011222333444432 45679999999999999
Q ss_pred HHhCCc---cEEecCCchhHHHH-hCceeccc
Q 002391 877 IQEADI---GIGISGVEGMQIVL-SGHDMRKC 904 (928)
Q Consensus 877 L~~Adv---GIa~~g~e~~~a~~-aaD~v~~~ 904 (928)
++.||+ +|++++......+. .+|+++.-
T Consensus 193 a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~ 224 (237)
T 4ex6_A 193 GRAAGMTVIGVSYGVSGPDELMRAGADTVVDS 224 (237)
T ss_dssp HHHTTCEEEEESSSSSCHHHHHHTTCSEEESS
T ss_pred HHHCCCeEEEEecCCCCHHHHHhcCCCEEECC
Confidence 999999 77776444333554 78998753
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.99 E-value=7.7e-06 Score=91.04 Aligned_cols=40 Identities=5% Similarity=0.157 Sum_probs=38.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
.+.|++.+.|+.|+++|++|+|+||.....+..+|.++|+
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 4789999999999999999999999999999999999987
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.98 E-value=1.9e-06 Score=90.27 Aligned_cols=59 Identities=24% Similarity=0.303 Sum_probs=44.5
Q ss_pred EcChh--hHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHhCCc-cEEecCCchhHHHHhCceec
Q 002391 843 RVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEADI-GIGISGVEGMQIVLSGHDMR 902 (928)
Q Consensus 843 r~~P~--qK~~iV~~l~~~~g~~vlaiGD----G~ND~~mL~~Adv-GIa~~g~e~~~a~~aaD~v~ 902 (928)
.+.|. .|+..++.+.......|++||| |.||++||+.|+. |++|++.... +|..||||+
T Consensus 181 eI~~~~~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~-vk~~A~~v~ 246 (246)
T 2amy_A 181 DVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDT-RRICELLFS 246 (246)
T ss_dssp EEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHH-HHHHHHHCC
T ss_pred EEecCCCchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHH-HHHHHhhcC
Confidence 34444 6888888882114578999999 9999999999987 9999765544 999999985
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.98 E-value=1.5e-05 Score=81.51 Aligned_cols=112 Identities=16% Similarity=0.122 Sum_probs=77.7
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
.+.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 131 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDA---------------------------------- 131 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheee----------------------------------
Confidence 5789999999999999999999999988888888888887422111
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcCh--hhHHHHHHHHhhc---CCCEEEEEcCCcc
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEG---TGKTTLAIGDGAN 872 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P--~qK~~iV~~l~~~---~g~~vlaiGDG~N 872 (928)
++.+...+ +-|..+++.+.+. ....+++|||+.|
T Consensus 132 -----------------------------------------~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~ 170 (226)
T 3mc1_A 132 -----------------------------------------IVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREY 170 (226)
T ss_dssp -----------------------------------------EEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHH
T ss_pred -----------------------------------------eeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHH
Confidence 12222111 2233444433322 3458999999999
Q ss_pred cHHHHHhCCc---cEEecCCchhHH-HHhCceeccc
Q 002391 873 DVGMIQEADI---GIGISGVEGMQI-VLSGHDMRKC 904 (928)
Q Consensus 873 D~~mL~~Adv---GIa~~g~e~~~a-~~aaD~v~~~ 904 (928)
|+.|.+.||+ +|+++.....+. +..+|+++.-
T Consensus 171 Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s 206 (226)
T 3mc1_A 171 DVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNS 206 (226)
T ss_dssp HHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESS
T ss_pred HHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECC
Confidence 9999999999 555544333323 5788998763
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=97.97 E-value=3.7e-05 Score=77.55 Aligned_cols=113 Identities=18% Similarity=0.153 Sum_probs=82.1
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.+++.+.++.|++. ++++++|+.....+..+.+.+|+...-...+..
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~------------------------------ 117 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEI------------------------------ 117 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEE------------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEE------------------------------
Confidence 5789999999999999 999999999999999999998874210000110
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEE--EcChhhHHHHHHHHhhcCCCEEEEEcCCcccHH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICC--RVSPKQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~--r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ 875 (928)
+.. ..... .-.|..|..+++.+.. .+..+++|||+.||+.
T Consensus 118 ----------------~~~---------------------~~~~~~~~p~p~~~~~~l~~l~~-~~~~~~~iGD~~~Di~ 159 (206)
T 1rku_A 118 ----------------DDS---------------------DRVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDSYNDTT 159 (206)
T ss_dssp ----------------CTT---------------------SCEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECSSTTHH
T ss_pred ----------------cCC---------------------ceEEeeecCCCchHHHHHHHHHh-cCCEEEEEeCChhhHH
Confidence 000 00111 1457789999998876 5789999999999999
Q ss_pred HHHhCCccEEecCCchhHHHHhCcee
Q 002391 876 MIQEADIGIGISGVEGMQIVLSGHDM 901 (928)
Q Consensus 876 mL~~AdvGIa~~g~e~~~a~~aaD~v 901 (928)
|.+.||+++++...+. .+..++.+
T Consensus 160 ~a~~aG~~~~~~~~~~--~~~~~~~~ 183 (206)
T 1rku_A 160 MLSEAHAGILFHAPEN--VIREFPQF 183 (206)
T ss_dssp HHHHSSEEEEESCCHH--HHHHCTTS
T ss_pred HHHhcCccEEECCcHH--HHHHHhhh
Confidence 9999999999843332 45555443
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.94 E-value=1.4e-05 Score=81.28 Aligned_cols=41 Identities=10% Similarity=0.020 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+.+++.+.++.|++.|++++++|+.....+......+|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 34689999999999999999999999888888777777763
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.85 E-value=2.1e-05 Score=79.97 Aligned_cols=113 Identities=12% Similarity=0.040 Sum_probs=73.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
.+.+++.+.++.|++.|+++.++|+. ..+..+...+|+...-..
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~---------------------------------- 134 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDA---------------------------------- 134 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcce----------------------------------
Confidence 46799999999999999999999998 445556666665321110
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcCh--hhHHHHHHHHhhcCCCEEEEEcCCcccHH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P--~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ 875 (928)
++.+.... ...| .--..+.+.+.- ....+++|||+.||+.
T Consensus 135 -------------~~~~~~~~------------------------~~Kp~~~~~~~~~~~lgi-~~~~~i~iGD~~nDi~ 176 (221)
T 2wf7_A 135 -------------IADPAEVA------------------------ASKPAPDIFIAAAHAVGV-APSESIGLEDSQAGIQ 176 (221)
T ss_dssp -------------ECCTTTSS------------------------SCTTSSHHHHHHHHHTTC-CGGGEEEEESSHHHHH
T ss_pred -------------EeccccCC------------------------CCCCChHHHHHHHHHcCC-ChhHeEEEeCCHHHHH
Confidence 11110000 0111 111223333332 3467999999999999
Q ss_pred HHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 876 MIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 876 mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
|++.||++++|.+... +.+ .||+++....
T Consensus 177 ~a~~aG~~~~~~~~~~-~~~-~a~~v~~~~~ 205 (221)
T 2wf7_A 177 AIKDSGALPIGVGRPE-DLG-DDIVIVPDTS 205 (221)
T ss_dssp HHHHHTCEEEEESCHH-HHC-SSSEEESSGG
T ss_pred HHHHCCCEEEEECCHH-Hhc-cccchhcCHH
Confidence 9999999999976543 355 8999876444
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=97.85 E-value=3.1e-05 Score=79.32 Aligned_cols=121 Identities=19% Similarity=0.217 Sum_probs=80.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.|++.++|+.|+++|++++++||.....+..+.+.+|+... ..+...
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--~~f~~~----------------------------- 134 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFANR----------------------------- 134 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEEC-----------------------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcc--cEEeee-----------------------------
Confidence 6889999999999999999999999999999999999998421 011000
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEE-c-----ChhhHHHHHHHHhhcCC-CEEEEEcCC
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-V-----SPKQKALVTRLVKEGTG-KTTLAIGDG 870 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r-~-----~P~qK~~iV~~l~~~~g-~~vlaiGDG 870 (928)
+..+. ...+.+. . .+..|..+++.+.+..| ..+++|||+
T Consensus 135 ------------~~~~~----------------------~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs 180 (225)
T 1nnl_A 135 ------------LKFYF----------------------NGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG 180 (225)
T ss_dssp ------------EEECT----------------------TSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESS
T ss_pred ------------EEEcC----------------------CCcEecCCCCCcccCCCchHHHHHHHHHHcCCCcEEEEeCc
Confidence 00000 0001111 1 12356556665543323 679999999
Q ss_pred cccHHHHHhCCccEEecCCc-hhHHHHhCceecc
Q 002391 871 ANDVGMIQEADIGIGISGVE-GMQIVLSGHDMRK 903 (928)
Q Consensus 871 ~ND~~mL~~AdvGIa~~g~e-~~~a~~aaD~v~~ 903 (928)
.||+.|.+.||++|+++... .......+|++..
T Consensus 181 ~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~ 214 (225)
T 1nnl_A 181 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT 214 (225)
T ss_dssp HHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES
T ss_pred HHhHHHHHhCCeEEEecCccccHHHHhcCCeeec
Confidence 99999999999988885432 1224456787754
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.82 E-value=3.1e-05 Score=79.37 Aligned_cols=41 Identities=22% Similarity=0.134 Sum_probs=36.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+.+++.+.++.|++.|++++++|+.....+..+....|+.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh
Confidence 46799999999999999999999999988888888888874
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.75 E-value=5.4e-05 Score=78.30 Aligned_cols=42 Identities=17% Similarity=0.117 Sum_probs=37.6
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
-++.+++.+.++.|++.|++++++|+.....+..+...+|+.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDID 150 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcH
Confidence 357899999999999999999999999888888888888874
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.75 E-value=2.9e-05 Score=81.79 Aligned_cols=40 Identities=28% Similarity=0.274 Sum_probs=34.3
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
.+.+++.+.++.|++.|+++.++|+.....+..+...+|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999988877777666655
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00012 Score=78.41 Aligned_cols=66 Identities=18% Similarity=0.157 Sum_probs=50.3
Q ss_pred EEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 840 ICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 840 v~~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
.+....|. .|...++.+.+..| ..+++|||+.||++|++.|++||+|++.... ++..||+++.-+.
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~-~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQE-AKNLHNLITDSEY 271 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHH-HHHHCCCBCSSCH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHH-HHHhCCEEcCCCC
Confidence 34444443 57777777655433 5699999999999999999999999765443 8889999987655
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.65 E-value=5.5e-05 Score=75.56 Aligned_cols=39 Identities=13% Similarity=0.154 Sum_probs=33.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
.+.+++.+.++.|++.|++++++|+....... .....|+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~ 123 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGV 123 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTC
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCc
Confidence 46799999999999999999999999887766 6666665
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.63 E-value=9.8e-05 Score=74.23 Aligned_cols=115 Identities=12% Similarity=0.077 Sum_probs=76.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 135 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIV--------------------------------- 135 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeE---------------------------------
Confidence 57899999999999999999999999998888888888874321111
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL 877 (928)
+.+..... ..-.|.--..+.+.+.- ....+++|||+.||+.|.
T Consensus 136 --------------~~~~~~~~----------------------~kp~~~~~~~~~~~~~~-~~~~~~~iGD~~~Di~~a 178 (214)
T 3e58_A 136 --------------LSGEEFKE----------------------SKPNPEIYLTALKQLNV-QASRALIIEDSEKGIAAG 178 (214)
T ss_dssp --------------EEGGGCSS----------------------CTTSSHHHHHHHHHHTC-CGGGEEEEECSHHHHHHH
T ss_pred --------------eecccccC----------------------CCCChHHHHHHHHHcCC-ChHHeEEEeccHhhHHHH
Confidence 11110000 00011122334444433 456799999999999999
Q ss_pred HhCCccEEecCC--chhHHHHhCceecc
Q 002391 878 QEADIGIGISGV--EGMQIVLSGHDMRK 903 (928)
Q Consensus 878 ~~AdvGIa~~g~--e~~~a~~aaD~v~~ 903 (928)
+.||+++.+.+. ... .+..+|++..
T Consensus 179 ~~aG~~~~~~~~~~~~~-~~~~a~~~~~ 205 (214)
T 3e58_A 179 VAADVEVWAIRDNEFGM-DQSAAKGLLD 205 (214)
T ss_dssp HHTTCEEEEECCSSSCC-CCTTSSEEES
T ss_pred HHCCCEEEEECCCCccc-hhccHHHHHH
Confidence 999998876432 221 2356777765
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00011 Score=76.39 Aligned_cols=42 Identities=19% Similarity=0.201 Sum_probs=37.9
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
-++.+++.++++.|++.|++++++|+.....+..+...+|+.
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 357799999999999999999999999998888898888874
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00012 Score=74.92 Aligned_cols=41 Identities=24% Similarity=0.277 Sum_probs=36.7
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 136 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLT 136 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCG
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 57899999999999999999999999988888888887774
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00014 Score=74.56 Aligned_cols=41 Identities=20% Similarity=0.173 Sum_probs=36.3
Q ss_pred cCCCChHHHHHHHHHc-CCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQA-GLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+.+++.+.++.|++. |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 4679999999999999 9999999999988888888877764
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=9.2e-05 Score=78.80 Aligned_cols=41 Identities=22% Similarity=0.270 Sum_probs=36.6
Q ss_pred cCCCChHHHHHHHHHcCC--cEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGL--KIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGI--kv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.++++.|++.|+ +++++|+.....+..+...+|+.
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~ 184 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIA 184 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCT
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcc
Confidence 467899999999999999 99999999988888888888874
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00011 Score=75.46 Aligned_cols=42 Identities=10% Similarity=0.011 Sum_probs=37.4
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
-++.+++.++++.|++.|++++++|+.....+..+...+|+.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 139 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMS 139 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCT
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcH
Confidence 356799999999999999999999999998888888888874
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0003 Score=71.98 Aligned_cols=41 Identities=15% Similarity=0.172 Sum_probs=37.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 143 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLT 143 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCch
Confidence 46899999999999999999999999988888888888874
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00021 Score=75.24 Aligned_cols=41 Identities=24% Similarity=0.153 Sum_probs=36.1
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 56799999999999999999999999988888887777764
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00016 Score=73.89 Aligned_cols=42 Identities=21% Similarity=0.216 Sum_probs=37.5
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
-++.+++.++++.|++.|++++++|+.....+..+...+|+.
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 123 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS 123 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH
Confidence 357899999999999999999999999888888888888874
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0002 Score=73.17 Aligned_cols=41 Identities=15% Similarity=0.096 Sum_probs=35.1
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCc---hhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK---METAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~---~~ta~~ia~~~gii 758 (928)
.+.+++.+.++.|++.|++++++|+.. ...+..+....|+.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~ 142 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLM 142 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcH
Confidence 357999999999999999999999998 77777777777764
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00029 Score=69.97 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=37.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCc-hhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK-METAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~-~~ta~~ia~~~gii 758 (928)
++.+++.++|+.|++.|++++++||.. ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 578999999999999999999999998 68888888888873
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0002 Score=74.87 Aligned_cols=41 Identities=12% Similarity=0.042 Sum_probs=36.5
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
-.+.+++.+.++.|++.|++++++|+.....+..+.+..|+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 149 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGL 149 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcCh
Confidence 35679999999999999999999999998888888888776
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00029 Score=72.23 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=36.8
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH
Confidence 57799999999999999999999999988888888888874
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0001 Score=74.39 Aligned_cols=40 Identities=13% Similarity=0.241 Sum_probs=35.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.+.++.|++. ++++++|+.....+..+.+.+|+.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~ 122 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFM 122 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGG
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChH
Confidence 4689999999999999 999999999988888888887763
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00034 Score=71.24 Aligned_cols=41 Identities=24% Similarity=0.241 Sum_probs=35.2
Q ss_pred cCCCChHHHHHHHHHcC-CcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAG-LKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aG-Ikv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+.+++.+.++.|++.| +++.++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~ 146 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLS 146 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCG
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcH
Confidence 56799999999999999 999999988887777777777763
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0003 Score=72.73 Aligned_cols=111 Identities=14% Similarity=0.208 Sum_probs=73.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
++.|++.++|+.|+++|++++++|+.....+..+.. |+... ..++......
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~-------------------------- 127 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASF-------------------------- 127 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEEC--------------------------
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEE--------------------------
Confidence 688999999999999999999999999888888777 66432 2222211100
Q ss_pred hhccCCCcCcEEEEEcCchhhHh-hhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYA-LEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~-~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~m 876 (928)
.+..+... ..+ ....+.+.....|..+++.+.. ....+++|||+.+|+.|
T Consensus 128 ---------------~~~~~~~~~~kp-------------~p~~~~~~~~~~K~~~~~~~~~-~~~~~~~vGDs~~Di~~ 178 (236)
T 2fea_A 128 ---------------DNDYIHIDWPHS-------------CKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGDSVTDVEA 178 (236)
T ss_dssp ---------------SSSBCEEECTTC-------------CCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEECCGGGHHH
T ss_pred ---------------cCCceEEecCCC-------------CccccccccCCcHHHHHHHHhc-cCCeEEEEeCChHHHHH
Confidence 00000000 000 0000111135578888888865 57889999999999999
Q ss_pred HHhCCccEEe
Q 002391 877 IQEADIGIGI 886 (928)
Q Consensus 877 L~~AdvGIa~ 886 (928)
.+.||+.++.
T Consensus 179 a~~aG~~~~~ 188 (236)
T 2fea_A 179 AKLSDLCFAR 188 (236)
T ss_dssp HHTCSEEEEC
T ss_pred HHhCCeeeec
Confidence 9999998864
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00034 Score=72.37 Aligned_cols=40 Identities=18% Similarity=0.123 Sum_probs=34.7
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 3569999999999999999999999888777777777775
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00015 Score=75.41 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=28.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAIN 750 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ 750 (928)
.+.+++.+.++.|++.|+++.++|+.....+..
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~ 144 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDM 144 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHH
Confidence 578999999999999999999999988665443
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00042 Score=70.07 Aligned_cols=40 Identities=13% Similarity=0.234 Sum_probs=35.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.|++.+.++.|++ |+++.++|+.....+..+.+.+|+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~ 123 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIH 123 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCch
Confidence 467999999999999 9999999998888888887888874
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00053 Score=67.65 Aligned_cols=38 Identities=16% Similarity=0.299 Sum_probs=31.5
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
+.+++.+.++.|++.|++++++|+... .+..+...+|+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 679999999999999999999999764 45566666665
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00041 Score=71.64 Aligned_cols=40 Identities=18% Similarity=0.243 Sum_probs=31.2
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
-++.+++.+.++.|++.|++++++|+.....+...... |+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 146 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NF 146 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hH
Confidence 46789999999999999999999999887666665555 65
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00041 Score=70.93 Aligned_cols=40 Identities=18% Similarity=0.172 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+.+++.+.++.|++. +++.++|+.....+..+...+|+.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~ 139 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIK 139 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcH
Confidence 4669999999999999 999999999988888888888774
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00037 Score=71.88 Aligned_cols=41 Identities=20% Similarity=0.147 Sum_probs=37.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57799999999999999999999999988888888888874
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00042 Score=71.03 Aligned_cols=113 Identities=14% Similarity=0.092 Sum_probs=74.3
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
.+.+++.++++.|+ .|++++++|+.....+..+...+|+...-..++
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~-------------------------------- 153 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKII-------------------------------- 153 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEE--------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEE--------------------------------
Confidence 56799999999999 999999999998888887777777643211111
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCCc-cc
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGA-ND 873 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~---~g~~vlaiGDG~-ND 873 (928)
.+.... ..+-|..+++.+.+. ....+++|||+. ||
T Consensus 154 ---------------~~~~~~--------------------------~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~D 192 (240)
T 3qnm_A 154 ---------------LSEDLG--------------------------VLKPRPEIFHFALSATQSELRESLMIGDSWEAD 192 (240)
T ss_dssp ---------------EGGGTT--------------------------CCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTT
T ss_pred ---------------EeccCC--------------------------CCCCCHHHHHHHHHHcCCCcccEEEECCCchHh
Confidence 110000 011122333333222 346899999995 99
Q ss_pred HHHHHhCCccEEecCCchh-HHHHhCceeccc
Q 002391 874 VGMIQEADIGIGISGVEGM-QIVLSGHDMRKC 904 (928)
Q Consensus 874 ~~mL~~AdvGIa~~g~e~~-~a~~aaD~v~~~ 904 (928)
+.|.+.||+++++.+.... .....+|+++.-
T Consensus 193 i~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~s 224 (240)
T 3qnm_A 193 ITGAHGVGMHQAFYNVTERTVFPFQPTYHIHS 224 (240)
T ss_dssp HHHHHHTTCEEEEECCSCCCCCSSCCSEEESS
T ss_pred HHHHHHcCCeEEEEcCCCCCCcCCCCceEECC
Confidence 9999999999988554331 244567887663
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00043 Score=71.55 Aligned_cols=40 Identities=18% Similarity=0.168 Sum_probs=33.1
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
-.+.+++.+.++.|++.|+++.++|+.....+...... |+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 147 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NF 147 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hH
Confidence 35779999999999999999999999887766655555 55
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00042 Score=68.11 Aligned_cols=28 Identities=25% Similarity=0.217 Sum_probs=26.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCch
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~ 745 (928)
++.+++.++|+.|+++|+++.++|+...
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSG 54 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTT
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCc
Confidence 4779999999999999999999999875
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00045 Score=73.20 Aligned_cols=40 Identities=15% Similarity=-0.075 Sum_probs=34.7
Q ss_pred cCCCChHHHHHHHHHc-CCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQA-GLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
.+.+++.+.++.|++. |+++.++|+.....+..+....|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 3579999999999999 999999999988877777777665
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0017 Score=67.01 Aligned_cols=41 Identities=12% Similarity=0.125 Sum_probs=36.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 46799999999999999999999998888888888888864
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0015 Score=68.73 Aligned_cols=42 Identities=7% Similarity=0.065 Sum_probs=34.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcC---CchhhHHHHHHHccccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTG---DKMETAINIGFACSLLR 759 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gii~ 759 (928)
.+-+++.++|++|+++|++++++|| +..........++|+..
T Consensus 22 ~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 22 EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 3446799999999999999999988 66677777778888743
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0014 Score=67.03 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+.+++.++++.|++. +++.++|+.....+......+|+.
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 142 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLF 142 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChH
Confidence 5779999999999999 999999999888888888887774
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0011 Score=67.45 Aligned_cols=38 Identities=13% Similarity=0.107 Sum_probs=30.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.+.++.|+. +++++|+.....+..+...+|+.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~ 124 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLK 124 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCG
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChH
Confidence 456888888888764 99999999888888888887764
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0015 Score=66.11 Aligned_cols=28 Identities=21% Similarity=0.387 Sum_probs=26.3
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCch
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~ 745 (928)
++.+++.++|+.|+++|+++.++|+...
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~ 77 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSG 77 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTH
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCC
Confidence 6789999999999999999999999984
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0018 Score=67.12 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
.+.+++.+.++.|+ .|++++++|+.....+......+|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l 150 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGL 150 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCc
Confidence 46799999999999 9999999999887777777666665
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.00064 Score=70.53 Aligned_cols=39 Identities=8% Similarity=0.069 Sum_probs=33.8
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
++.+++.+.++.|++. ++++++|+.....+..+...+|+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~ 158 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGL 158 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTC
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCC
Confidence 4578999999999985 99999999988888888887776
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0011 Score=68.56 Aligned_cols=39 Identities=5% Similarity=0.022 Sum_probs=34.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
++.+++.++++.|++. +++.++|+.....+..+...+|+
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~ 154 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGI 154 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTC
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCC
Confidence 5679999999999997 99999999998888888888776
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0015 Score=65.15 Aligned_cols=40 Identities=13% Similarity=0.007 Sum_probs=35.1
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+.+++.+.++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 36799999999999999 99999999988888888877764
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0018 Score=64.65 Aligned_cols=39 Identities=10% Similarity=0.169 Sum_probs=34.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.+ ++.|++. +++.++|+.....+..+...+|+.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 112 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLL 112 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcH
Confidence 56799999 9999999 999999999988888888888874
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0028 Score=65.86 Aligned_cols=39 Identities=21% Similarity=0.219 Sum_probs=35.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.++++.|+ |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 57899999999999 9999999999988888888888874
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0014 Score=65.97 Aligned_cols=36 Identities=11% Similarity=0.074 Sum_probs=30.7
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 754 (928)
++.+++.+.++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 467899999999999 999999999887777666665
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0022 Score=67.32 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=33.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.++++.|++.|+++.++|+... .+..+...+|+.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~ 145 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLR 145 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCG
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcH
Confidence 4679999999999999999999999665 456777777764
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0014 Score=66.95 Aligned_cols=36 Identities=8% Similarity=-0.021 Sum_probs=30.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 754 (928)
++.+++.++++.|++ |+++.++|+.....+..+...
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~ 134 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK 134 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh
Confidence 578999999999999 899999999887766666554
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0016 Score=68.38 Aligned_cols=45 Identities=13% Similarity=0.005 Sum_probs=36.4
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcC---CchhhHHHHHHHcccccc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTG---DKMETAINIGFACSLLRQ 760 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gii~~ 760 (928)
.+.+-+++.++|++|+++|++++++|| +...........+|+...
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 455567899999999999999999999 666667777778887533
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.012 Score=58.17 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=36.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCch---hhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKM---ETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~---~ta~~ia~~~gii 758 (928)
++.+++.++++.|+++|++++++|+... ..+..+...+|+.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 5789999999999999999999998876 7788888888874
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0021 Score=59.59 Aligned_cols=40 Identities=10% Similarity=-0.022 Sum_probs=34.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
++.|++.++++.|++.|++++++|+.....+..+.+.+|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 4668899999999999999999999988887777777665
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0042 Score=65.27 Aligned_cols=42 Identities=12% Similarity=0.082 Sum_probs=37.4
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEc---CCchhhHHHHHHHcccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLT---GDKMETAINIGFACSLL 758 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gii 758 (928)
.++-+++.++|++|++.|++++++| |+.........+.+|+-
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5677899999999999999999999 88888888888888874
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0015 Score=65.21 Aligned_cols=31 Identities=23% Similarity=0.303 Sum_probs=26.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETA 748 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta 748 (928)
++.+++.+.++.|++.|++++++|+.....+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~ 121 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 121 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHH
Confidence 5678999999999999999999999765543
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.12 E-value=0.01 Score=60.14 Aligned_cols=29 Identities=21% Similarity=0.221 Sum_probs=26.8
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCch
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~ 745 (928)
.++.+++.++|+.|+++|+++.++|+...
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCC
Confidence 46789999999999999999999999987
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0074 Score=61.90 Aligned_cols=40 Identities=15% Similarity=0.176 Sum_probs=31.7
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEc---CCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLT---GDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi 757 (928)
+.-+.+.++++.|++.|++++++| |+............|+
T Consensus 19 ~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~ 61 (250)
T 2c4n_A 19 VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGV 61 (250)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTC
T ss_pred EeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCC
Confidence 333455889999999999999999 8887777776666666
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.0089 Score=61.98 Aligned_cols=43 Identities=5% Similarity=0.085 Sum_probs=35.5
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchh----hHHHHHHHcccc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKME----TAINIGFACSLL 758 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~----ta~~ia~~~gii 758 (928)
+.++.|++.+.|+.|++.|+++.++||++.. .+..-.+.+||-
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 3578899999999999999999999999764 555556667773
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.78 E-value=0.016 Score=60.70 Aligned_cols=42 Identities=12% Similarity=0.197 Sum_probs=36.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEc---CCchhhHHHHHHHcccccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLT---GDKMETAINIGFACSLLRQ 760 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gii~~ 760 (928)
.+ +++.++|++|+++|++++++| |+..........++|+...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 45 899999999999999999999 8888888888888888543
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=95.78 E-value=0.06 Score=52.90 Aligned_cols=39 Identities=13% Similarity=0.235 Sum_probs=24.6
Q ss_pred EEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEE
Q 002391 623 LLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALA 665 (928)
Q Consensus 623 l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A 665 (928)
.+.-|....|.+. +-...+.....+.++..+|..++.+|
T Consensus 133 ~v~iGn~~~m~~~----gi~i~~~~~~~~~~~~~~G~T~V~va 171 (185)
T 2kmv_A 133 KVLIGNREWMIRN----GLVINNDVNDFMTEHERKGRTAVLVA 171 (185)
T ss_dssp EEEEECHHHHHHH----TCCCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEECCHHHHHHc----CCCCCHHHHHHHHHHHhCCCeEEEEE
Confidence 4455887766432 11122344556778888999888888
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.04 Score=55.26 Aligned_cols=42 Identities=17% Similarity=0.161 Sum_probs=38.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~ 759 (928)
++.|++.++++.|++.|+++.++|+-....+..+.+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 457999999999999999999999999999999988888853
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.64 E-value=0.026 Score=61.00 Aligned_cols=41 Identities=15% Similarity=0.281 Sum_probs=37.2
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACS 756 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~g 756 (928)
...+.+++.+.|+.|+++|++|||+||-....+..+|..++
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~ 181 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPR 181 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGG
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcc
Confidence 34578899999999999999999999999999999998863
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.56 E-value=0.038 Score=57.44 Aligned_cols=40 Identities=13% Similarity=0.096 Sum_probs=35.0
Q ss_pred CCCChHHHHHHHHHcCCcEEEEc---CCchhhHHHHHHHcccc
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLT---GDKMETAINIGFACSLL 758 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gii 758 (928)
+-+++.++++.|++.|++++++| |+...........+|+-
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 56889999999999999999999 99988888887777763
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=95.34 E-value=0.013 Score=59.74 Aligned_cols=34 Identities=9% Similarity=0.013 Sum_probs=29.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG 752 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia 752 (928)
++.+++.++++.|++. +++.++|+.....+..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHH
Confidence 3568999999999999 999999999888777665
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.21 E-value=0.0082 Score=58.77 Aligned_cols=40 Identities=23% Similarity=0.277 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCC---------------chhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGD---------------KMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD---------------~~~ta~~ia~~~gi 757 (928)
++.|++.++|+.|++.|++++++|+- ....+..+....|+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 96 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGV 96 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCC
Confidence 57799999999999999999999997 44556666777776
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.13 E-value=0.015 Score=60.42 Aligned_cols=43 Identities=12% Similarity=0.061 Sum_probs=35.1
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchh----hHHHHHHHcccc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKME----TAINIGFACSLL 758 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~----ta~~ia~~~gii 758 (928)
+.++.|++.+.++.|++.|+++.++||++.. .+..-.+.+||-
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 4678899999999999999999999999764 455555666773
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.94 E-value=0.034 Score=59.41 Aligned_cols=32 Identities=25% Similarity=0.267 Sum_probs=28.5
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhh
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~t 747 (928)
++++.+++.++++.|+++|+++.++||.....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 45678999999999999999999999998653
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=94.63 E-value=0.038 Score=55.02 Aligned_cols=34 Identities=12% Similarity=0.175 Sum_probs=29.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINI 751 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~i 751 (928)
++.+++.++++.|+++|+++.++||.....+..+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~ 69 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPL 69 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh
Confidence 5679999999999999999999999887766433
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=94.63 E-value=0.04 Score=55.68 Aligned_cols=44 Identities=11% Similarity=-0.010 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCc-ccHHHHHhCCccEEecC---CchhHHHHhCceeccc
Q 002391 860 TGKTTLAIGDGA-NDVGMIQEADIGIGISG---VEGMQIVLSGHDMRKC 904 (928)
Q Consensus 860 ~g~~vlaiGDG~-ND~~mL~~AdvGIa~~g---~e~~~a~~aaD~v~~~ 904 (928)
....+++|||+. ||+.|.+.||+++.+-. .... ....+|++...
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~-~~~~~~~~~~~ 218 (230)
T 3vay_A 171 DASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWD-ADRLPDAEIHN 218 (230)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCC-SSSCCSEEESS
T ss_pred CchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCc-ccCCCCeeECC
Confidence 446799999998 99999999999986622 2111 14456766553
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=94.61 E-value=0.066 Score=55.79 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=35.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.++++.|++ |+++.++|+.....+..+...+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 567999999999998 5999999999988888888888874
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.51 E-value=0.028 Score=58.68 Aligned_cols=42 Identities=12% Similarity=0.119 Sum_probs=33.0
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhh---HHHHHHHcccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMET---AINIGFACSLL 758 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~t---a~~ia~~~gii 758 (928)
.++-|++.++|+.|++.|+++.++||+.... +......+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 4677999999999999999999999998543 33344555663
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=94.07 E-value=0.12 Score=53.34 Aligned_cols=112 Identities=13% Similarity=0.197 Sum_probs=72.0
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhh
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
.++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-..
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~--------------------------------- 159 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF--------------------------------- 159 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE---------------------------------
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce---------------------------------
Confidence 4578999999999999999999888764 35566777777432111
Q ss_pred hhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcCh--hhHHHHHHHHhhcCCCEEEEEcCCcccH
Q 002391 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEGTGKTTLAIGDGANDV 874 (928)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P--~qK~~iV~~l~~~~g~~vlaiGDG~ND~ 874 (928)
++++.... +..| +-=..+++.+.- ....+++|||..+|+
T Consensus 160 --------------i~~~~~~~------------------------~~KP~p~~~~~a~~~lg~-~p~e~l~VGDs~~Di 200 (250)
T 4gib_A 160 --------------IADAGKCK------------------------NNKPHPEIFLMSAKGLNV-NPQNCIGIEDASAGI 200 (250)
T ss_dssp --------------ECCGGGCC------------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEESSHHHH
T ss_pred --------------eecccccC------------------------CCCCcHHHHHHHHHHhCC-ChHHeEEECCCHHHH
Confidence 11111110 0112 222334444443 456799999999999
Q ss_pred HHHHhCCc-cEEecCCchhHHHHhCceecccc
Q 002391 875 GMIQEADI-GIGISGVEGMQIVLSGHDMRKCI 905 (928)
Q Consensus 875 ~mL~~Adv-GIa~~g~e~~~a~~aaD~v~~~~ 905 (928)
.+-+.||+ .|++.+.+. ...||++....
T Consensus 201 ~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l 229 (250)
T 4gib_A 201 DAINSANMFSVGVGNYEN---LKKANLVVDST 229 (250)
T ss_dssp HHHHHTTCEEEEESCTTT---TTTSSEEESSG
T ss_pred HHHHHcCCEEEEECChhH---hccCCEEECCh
Confidence 99999997 567755443 23578876543
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=93.60 E-value=0.056 Score=59.68 Aligned_cols=42 Identities=19% Similarity=0.182 Sum_probs=37.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~ 759 (928)
++.||+.++++.|+++|+++.++|+.....+..+....|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999988888888888753
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=93.57 E-value=0.33 Score=49.14 Aligned_cols=39 Identities=13% Similarity=0.145 Sum_probs=35.3
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
++.|++.++++.|++.| ++.++|+.....+..+...+|+
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 68899999999999999 9999999988888888887776
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=93.30 E-value=0.065 Score=54.02 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=33.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+++.++++.|+++|+++.++|+.... +..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcH
Confidence 57799999999999999999999998764 66777777763
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=92.92 E-value=0.11 Score=55.39 Aligned_cols=43 Identities=14% Similarity=0.136 Sum_probs=35.2
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEc---CCchhhHHHHHHHcccc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLT---GDKMETAINIGFACSLL 758 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gii 758 (928)
.+++-+++.++|+.|++.|++++++| |+.........+.+|+-
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45677899999999999999999999 57776666666777764
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=92.54 E-value=0.35 Score=49.72 Aligned_cols=43 Identities=12% Similarity=0.166 Sum_probs=30.6
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEc---CCchhhHHHHHHHcccc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLT---GDKMETAINIGFACSLL 758 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gii 758 (928)
.+++-+++.++++.|++.|++++++| |+............|+-
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 44555789999999999999999999 55555555555566663
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=92.05 E-value=0.29 Score=50.88 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=32.6
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHH
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 754 (928)
-++.+++.++++.|+++|+++.++|+-+...+..+...
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~ 166 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH 166 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh
Confidence 36889999999999999999999999888777666553
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=91.03 E-value=0.18 Score=47.05 Aligned_cols=39 Identities=15% Similarity=0.070 Sum_probs=33.1
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCc---hhhHHHHHHHccc
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDK---METAINIGFACSL 757 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~---~~ta~~ia~~~gi 757 (928)
+-+++.++|++|+++|++++++|||+ ...+...+.+.|+
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi 66 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL 66 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCC
Confidence 35789999999999999999999998 4566677777776
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=90.71 E-value=0.26 Score=50.44 Aligned_cols=40 Identities=15% Similarity=0.097 Sum_probs=32.3
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.++.+++.+.++.|++.|+++.++|+... +..+...+|+.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~ 133 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELR 133 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhc
Confidence 35789999999999999999999998653 44556667764
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=89.96 E-value=0.15 Score=51.26 Aligned_cols=29 Identities=24% Similarity=0.256 Sum_probs=25.5
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCchhh
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~~~t 747 (928)
+.+++.+.++.|+++|+++.++||.....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 45689999999999999999999997653
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=88.61 E-value=2.2 Score=40.70 Aligned_cols=38 Identities=11% Similarity=0.160 Sum_probs=22.6
Q ss_pred EEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEE
Q 002391 624 LCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALA 665 (928)
Q Consensus 624 ~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A 665 (928)
+.=|....|.+. +-.........+..+..+|..++.+|
T Consensus 115 v~iGn~~~m~~~----gi~~~~~~~~~~~~~~~~G~T~v~va 152 (165)
T 2arf_A 115 VLIGNREWLRRN----GLTISSDVSDAMTDHEMKGQTAILVA 152 (165)
T ss_dssp EEEECHHHHHHH----HCSSCHHHHHHHHHHHTTTSEEEEEE
T ss_pred EEEcCHHHHHhc----CCCCCHHHHHHHHHHHhCCCeEEEEE
Confidence 334887665431 11122234455667788999888888
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=86.37 E-value=0.78 Score=51.24 Aligned_cols=26 Identities=27% Similarity=0.500 Sum_probs=24.4
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCc
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDK 744 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~ 744 (928)
+-+++.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=86.01 E-value=0.93 Score=46.75 Aligned_cols=42 Identities=7% Similarity=0.160 Sum_probs=33.9
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHH----cccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA----CSLL 758 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~----~gii 758 (928)
++.-+++.++++.|++.|+++.++||+...+...++.. +|+-
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 33336888999999999999999999998877776664 6663
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=84.64 E-value=0.73 Score=52.84 Aligned_cols=26 Identities=23% Similarity=0.298 Sum_probs=24.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCC
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGD 743 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD 743 (928)
++.+++.++|+.|+++|+++.++|+-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 57799999999999999999999995
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 928 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 7e-29 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-20 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 6e-13 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 1e-06 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 4e-06 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 6e-04 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 7e-04 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 0.003 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 113 bits (284), Expect = 7e-29
Identities = 42/230 (18%), Positives = 66/230 (28%), Gaps = 35/230 (15%)
Query: 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFL 560
+ E L + ++ D L+ I A+C+ + + NE G E A
Sbjct: 28 TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEK-VGEATETALT 86
Query: 561 VAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQ 620
+ S ER + + K L+F+ RK MSV
Sbjct: 87 TLVEKMNVFNTEVRNLSKV--ERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSS 144
Query: 621 -----ILLLCKGADSIIFDRLSKNG---------RMYEEATTKLLNEYGEA--GLRTLAL 664
+ KGA + DR + +E ++ E+G LR LAL
Sbjct: 145 RAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL 204
Query: 665 AYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATA 714
A + + + E DL VG
Sbjct: 205 ATRDTPPKREEMVLDDSSRF----------------MEYETDLTFVGVVG 238
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 88.8 bits (219), Expect = 2e-20
Identities = 34/214 (15%), Positives = 58/214 (27%), Gaps = 46/214 (21%)
Query: 517 EPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAE--SPDEAAFLVAAREFGFEFYRRT 574
+ T RI +C+ A+ + +E +++ E+A L
Sbjct: 28 DKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSV---- 83
Query: 575 QSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDE--DGQILLLCKGADSII 632
+ + + + F S K I E +L+ KGA I
Sbjct: 84 --------------RKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERI 129
Query: 633 FDRLS---KNGRMYE------EATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQK 683
DR S G+ +A E G G R L L ++
Sbjct: 130 LDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTD 189
Query: 684 AKSSIGADREATLEHVSDMMEKDLILVGATAVED 717
+ + L VG ++ D
Sbjct: 190 ELNFP---------------TEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 69.1 bits (168), Expect = 6e-13
Identities = 41/415 (9%), Positives = 94/415 (22%), Gaps = 108/415 (26%)
Query: 477 SGSEIELETVITSND-GNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535
+ L + I ++ + I+ F+ ++++ N + +LF I+ H
Sbjct: 32 DKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLF--IVFSIHL 89
Query: 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREF 595
++ + + AF+ + I
Sbjct: 90 I---------DILKKLSHDEIEAFMYQDEPVELKLQN-------ISTNLADCFN------ 127
Query: 596 KILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYG 655
L+ + + + ++ L + A + + + + L
Sbjct: 128 -----LNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDAT-----LFSLKGALWTLA 177
Query: 656 EAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAV 715
+ + L K ++ E + + G
Sbjct: 178 QEVYQEWYLGSKLYEDVE---------------------------KKIARTTFKTGYIYQ 210
Query: 716 EDKLQK--GVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD 773
E L+ V ++ L AG ++ + TG + LL TA +
Sbjct: 211 EIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVL 270
Query: 774 SVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA 833
+A P+ L
Sbjct: 271 EAENMYPQARP----------------LGKPNP-----------------FSYIAAL--- 294
Query: 834 VECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADI-GIGIS 887
+ + + +GD D+ Q+ IG
Sbjct: 295 ------YGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTL 342
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 47.1 bits (111), Expect = 1e-06
Identities = 33/207 (15%), Positives = 60/207 (28%), Gaps = 55/207 (26%)
Query: 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQI 765
D T D +K V I AG+++ ++TGD TAI I
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC------------- 54
Query: 766 CITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDM 825
+ I + + G+ +
Sbjct: 55 ------------------------------RRIGIFGENEEVADRAYTGREFDDLPLAEQ 84
Query: 826 KHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIG 885
+ + RV P K+ + ++ T GDG ND +++A+IGI
Sbjct: 85 REAC------RRACCFARVEPSHKSKIVEYLQSYDEI-TAMTGDGVNDAPALKKAEIGIA 137
Query: 886 ISG-----VEGMQIVLSGHDMRKCIQV 907
+ ++VL+ + +
Sbjct: 138 MGSGTAVAKTASEMVLADDNFSTIVAA 164
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.5 bits (109), Expect = 4e-06
Identities = 18/86 (20%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Query: 817 LAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876
A L+ + G + + ++ L ++ K + IGDGA D+
Sbjct: 127 FANRLKFYFNGEYAGFDETQPTAESG----GKGKVIKLLKEKFHFKKIIMIGDGATDMEA 182
Query: 877 IQEADIGIGISGVEGMQIVLSGHDMR 902
AD IG G Q V
Sbjct: 183 CPPADAFIGFGGNVIRQQVKDNAKWY 208
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 38.9 bits (90), Expect = 6e-04
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Query: 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETA------INIGFACSLLR 759
D D L++ + +L + G+K+ ++TGD +A +N+ + +
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL 68
Query: 760 QGMKQICITALNSDSV 775
K + L + V
Sbjct: 69 PHQKSEEVKKLQAKEV 84
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 40.0 bits (92), Expect = 7e-04
Identities = 24/178 (13%), Positives = 55/178 (30%), Gaps = 12/178 (6%)
Query: 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINI----GFACSLLRQGMKQICITALN 771
+ + + I + G+ I ++TG+ ++ A G + ++ + I
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 772 SDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLG 831
+ + + I + NA + L+I +T+ ++ +
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDRR---AGLVIMRETINVETVREIINELNL 133
Query: 832 LAVECASVICCRVSPKQKALVTRLVKEG-----TGKTTLAIGDGANDVGMIQEADIGI 884
V S V + + K K +GDG ND+ + +
Sbjct: 134 NLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKV 191
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 37.8 bits (86), Expect = 0.003
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 864 TLAIGDGANDVGMIQEADIGIGISG 888
TL +GDG ND +++ D + + G
Sbjct: 206 TLGLGDGPNDAPLLEVMDYAVIVKG 230
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 928 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.93 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.91 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.88 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.84 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.83 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.81 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.29 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.05 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.03 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.03 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.99 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.93 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.91 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.86 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.84 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.81 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.8 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.78 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.65 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.59 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.54 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.42 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.37 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.29 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.27 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.95 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.25 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 96.74 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.51 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 96.32 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.31 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.14 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.13 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.08 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.01 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.73 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 95.4 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 95.07 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 94.75 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 94.35 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.2 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 93.6 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 93.54 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 93.42 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 92.62 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 91.43 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 90.81 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 90.34 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 88.13 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 85.32 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 85.1 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 84.45 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 83.21 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.93 E-value=2.8e-26 Score=222.89 Aligned_cols=139 Identities=20% Similarity=0.258 Sum_probs=115.2
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhh
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
||+|++++++|+.|+++||+|||+|||+..||.++|+++||+..+..+.
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~------------------------------- 67 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA------------------------------- 67 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCT-------------------------------
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccc-------------------------------
Confidence 9999999999999999999999999999999999999999987654310
Q ss_pred hhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHH
Q 002391 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (928)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~m 876 (928)
...++|..+......+..+.... ..+|+|++|+||..+|+.+++ .|++|+|+|||.||++|
T Consensus 68 ------------~~~~~~~~~~~~~~~~~~~~~~~------~~v~ar~~p~~K~~lv~~l~~-~g~~Va~vGDG~nD~~A 128 (168)
T d1wpga2 68 ------------DRAYTGREFDDLPLAEQREACRR------ACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPA 128 (168)
T ss_dssp ------------TTEEEHHHHHHSCHHHHHHHHHH------CCEEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHH
T ss_pred ------------cccccccccchhhHHHHhhhhhh------hhhhhccchhHHHHHHHHHHh-cccceeEEecCCCCHHH
Confidence 01455666655544444444333 459999999999999999998 79999999999999999
Q ss_pred HHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 877 IQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 877 L~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
|+.|||||+|+... .-|+++||+++.-++
T Consensus 129 L~~AdvGIa~~~gt-~~a~~aAdivl~~~~ 157 (168)
T d1wpga2 129 LKKAEIGIAMGSGT-AVAKTASEMVLADDN 157 (168)
T ss_dssp HHHSSEEEEETTSC-HHHHHTCSEEETTCC
T ss_pred HHhCCEEEEecccc-HHHHHhCCEEEccCC
Confidence 99999999996433 338999999988665
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.91 E-value=1.8e-25 Score=228.00 Aligned_cols=170 Identities=21% Similarity=0.208 Sum_probs=123.8
Q ss_pred hHHHHHHHHHHhhccceeecccCCCCc--eEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEE
Q 002391 520 VDTLLLFFRILAICHTAIPELNEETGN--LTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597 (928)
Q Consensus 520 ~~~~~~~~~~l~lc~~~~~~~~~~~~~--~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 597 (928)
+..+..++.++++||++....+..... -....|+|+|.||+.+|.+.|+.... .+..|++
T Consensus 31 ~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~------------------~r~~~~~ 92 (214)
T d1q3ia_ 31 SPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK------------------MRDRNPK 92 (214)
T ss_dssp SHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHH------------------HHHTSCE
T ss_pred CHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHH------------------HHhhCcE
Confidence 456778999999999987654332110 01125899999999999988765422 2456788
Q ss_pred EEeecCCCCCceeEEEEEcC--CCcEEEEEccchhhhHHhhcc---------cccccHHHHHHHHHHHHhcCCeEEEEEE
Q 002391 598 LNLLDFTSKRKRMSVIVRDE--DGQILLLCKGADSIIFDRLSK---------NGRMYEEATTKLLNEYGEAGLRTLALAY 666 (928)
Q Consensus 598 l~~~~F~s~rkrmsviv~~~--~~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~Glr~l~~A~ 666 (928)
+..+||+|.||||+++++.+ ++.+++|+|||||.|+++|+. -.+..++.+.+.+++|+.+|+|||++||
T Consensus 93 v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~ 172 (214)
T d1q3ia_ 93 VAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQ 172 (214)
T ss_dssp EEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred eeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEEE
Confidence 99999999999999999975 467999999999999999985 1234578899999999999999999999
Q ss_pred EeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCCC
Q 002391 667 KQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKG 722 (928)
Q Consensus 667 k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~~ 722 (928)
|+++.+++..|.. .+.+ ..+.+|+||+|+|++||+||+|+.
T Consensus 173 k~l~~~~~~~~~~----------~~~~-----~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 173 LNLPSGKFPRGFK----------FDTD-----ELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEECTTTSCTTCC----------CCTT-----TTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EecCccccccccc----------cChh-----hhhhhcCCCEEEEEEEEEeCCCCC
Confidence 9999877654422 1111 114567999999999999999974
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=3.1e-23 Score=192.96 Aligned_cols=119 Identities=24% Similarity=0.311 Sum_probs=100.8
Q ss_pred cccEEEeeeeecccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHH
Q 002391 705 KDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVK 784 (928)
Q Consensus 705 ~dl~llG~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~ 784 (928)
-|.+..+.++++|++|++++++|+.|+++||++||+|||+..+|.++|++|||-
T Consensus 8 ~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~-------------------------- 61 (135)
T d2b8ea1 8 FDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-------------------------- 61 (135)
T ss_dssp EECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--------------------------
T ss_pred ECCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh--------------------------
Confidence 355567789999999999999999999999999999999999999999999982
Q ss_pred hhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEE
Q 002391 785 DNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTT 864 (928)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~v 864 (928)
.++++++|++|..+++.++. +..|
T Consensus 62 ------------------------------------------------------~v~~~~~p~~k~~~v~~~q~--~~~v 85 (135)
T d2b8ea1 62 ------------------------------------------------------LVIAEVLPHQKSEEVKKLQA--KEVV 85 (135)
T ss_dssp ------------------------------------------------------EEECSCCHHHHHHHHHHHTT--TSCE
T ss_pred ------------------------------------------------------hhccccchhHHHHHHHHHHc--CCEE
Confidence 17899999999999999986 5789
Q ss_pred EEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 865 LAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 865 laiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+|+|||.||++||++|||||+|++.... ++.+||+++.-.+
T Consensus 86 ~~vGDg~nD~~aL~~Advgia~~~~~~~-~~~aADivl~~~~ 126 (135)
T d2b8ea1 86 AFVGDGINDAPALAQADLGIAVGSGSDV-AVESGDIVLIRDD 126 (135)
T ss_dssp EEEECSSSSHHHHHHSSEEEEECCC---------SEEESSCC
T ss_pred EEEeCCCCcHHHHHhCCeeeecCccCHH-HHHhCCEEEECCC
Confidence 9999999999999999999999654433 8999999988665
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.84 E-value=8.6e-22 Score=204.23 Aligned_cols=178 Identities=23% Similarity=0.246 Sum_probs=125.6
Q ss_pred ChHHHHHHHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEE
Q 002391 519 NVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598 (928)
Q Consensus 519 ~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il 598 (928)
..+.+.+++.++++||++....+...+. ....++|+|.||+.+|.++|+........... +.........+..|+++
T Consensus 46 ~~~~l~~ll~~~~LCn~a~l~~~~~~~~-~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v 122 (239)
T d1wpga3 46 QFDGLVELATICALCNDSSLDFNETKGV-YEKVGEATETALTTLVEKMNVFNTEVRNLSKV--ERANACNSVIRQLMKKE 122 (239)
T ss_dssp GCHHHHHHHHHHHHSCSCEEEEETTTTE-EEEESCHHHHHHHHHHHHHCTTCCCCSSSCHH--HHTTHHHHHHHHHEEEE
T ss_pred ccHHHHHHHHHHHhcCCCEeeecCCCCe-EEEcCCCCcHHHHHHHHHhCCChHHhhccchh--hhhccchhhhhhhCeEE
Confidence 3456788999999999998765554443 34569999999999999999765331100000 00000000013579999
Q ss_pred EeecCCCCCceeEEEEEcCCC-----cEEEEEccchhhhHHhhcc---------cccccHHHHHHHHHHH--HhcCCeEE
Q 002391 599 NLLDFTSKRKRMSVIVRDEDG-----QILLLCKGADSIIFDRLSK---------NGRMYEEATTKLLNEY--GEAGLRTL 662 (928)
Q Consensus 599 ~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~~~~~--~~~Glr~l 662 (928)
+.+||+|.||||||+++.+++ .+++|+|||||.|+++|+. -....++.+.+.+++| +.+|+|||
T Consensus 123 ~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvL 202 (239)
T d1wpga3 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 202 (239)
T ss_dssp EEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred EEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEE
Confidence 999999999999999998664 4789999999999999975 1223456677777776 67999999
Q ss_pred EEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEEeeeee
Q 002391 663 ALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAV 715 (928)
Q Consensus 663 ~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~llG~~~i 715 (928)
++|||+++..+...+.. +.. ..+.+|+||+|+|++||
T Consensus 203 a~A~k~~~~~~~~~~~~-----------~~~-----~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 203 ALATRDTPPKREEMVLD-----------DSS-----RFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEEESSCCCGGGCCTT-----------CGG-----GHHHHTCSEEEEEEEEE
T ss_pred EEEEEECCccccccccc-----------chh-----hHHHhcCCCEEEEEECC
Confidence 99999998654322111 110 12567999999999986
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.83 E-value=9.9e-26 Score=250.84 Aligned_cols=269 Identities=12% Similarity=0.039 Sum_probs=177.6
Q ss_pred HHHHHhhccceeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCC
Q 002391 526 FFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTS 605 (928)
Q Consensus 526 ~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s 605 (928)
+....++|+.+.... ..++|++.+++..++..+..+.. ....|.....+||++
T Consensus 80 l~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~i~f~~ 132 (380)
T d1qyia_ 80 MLFIVFSIHLIDILK---------KLSHDEIEAFMYQDEPVELKLQN------------------ISTNLADCFNLNEQL 132 (380)
T ss_dssp HHHHHHHHHHHHHHT---------TSCHHHHHHHHHCSSCHHHHHTT------------------SGGGCSSCCCCCTTT
T ss_pred HHHHHHHHHHHHHHh---------hcCCCcHHHHHHHHhhccchHHH------------------HHHhccccccCCcch
Confidence 445555676553221 13678888888754432221111 123444456789999
Q ss_pred CCceeEEEEEcCCCcEEEEEccchhhhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Q 002391 606 KRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAK 685 (928)
Q Consensus 606 ~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~ 685 (928)
.+|+|+++....++.+.++.||+++.+.. .. .....+...+..++.+|+|++++|++..+..+
T Consensus 133 ~~k~~~~~~~~~~~~~~~~~~~a~~~~~~----~~-~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~------------ 195 (380)
T d1qyia_ 133 PLQFLDNVKVGKNNIYAALEEFATTELHV----SD-ATLFSLKGALWTLAQEVYQEWYLGSKLYEDVE------------ 195 (380)
T ss_dssp THHHHTTCCSSHHHHHHHHHHHHHHHTTC----SC-CGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHH------------
T ss_pred HHHHHhhhcccccchhHhhhhccHhhcCC----cH-HHHHHHHhHHHHHHHHHHHHHHHhhhcccccc------------
Confidence 99999988765555566667777765421 11 12334556778899999999998876443221
Q ss_pred hhhhhcHHHHHHHHHHhhhcccEEEeeeeecccCCC--ChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCce
Q 002391 686 SSIGADREATLEHVSDMMEKDLILVGATAVEDKLQK--GVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMK 763 (928)
Q Consensus 686 ~~l~~~r~~~l~~~~~~ie~dl~llG~~~i~D~lr~--~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~ 763 (928)
.....+....|+++.+++++| +++++|+.|+++||+++|+|||+..+|..+++++||...-..
T Consensus 196 ---------------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~ 260 (380)
T d1qyia_ 196 ---------------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA 260 (380)
T ss_dssp ---------------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCG
T ss_pred ---------------cccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCc
Confidence 122345566899999999776 999999999999999999999999999999999999642211
Q ss_pred EEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCCcCcEEEEEcCchhhHhh----------hHHHHHHHHhhh
Q 002391 764 QICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL----------EDDMKHHFLGLA 833 (928)
Q Consensus 764 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~----------~~~~~~~~~~~~ 833 (928)
.. +++|.+..... .+ ....+..
T Consensus 261 ~~---------------------------------------------i~~~~d~~~~~~~~~~~~~~~KP-~p~~~~~-- 292 (380)
T d1qyia_ 261 DF---------------------------------------------IATASDVLEAENMYPQARPLGKP-NPFSYIA-- 292 (380)
T ss_dssp GG---------------------------------------------EECHHHHHHHHHHSTTSCCCCTT-STHHHHH--
T ss_pred ce---------------------------------------------EEecchhhhhhhhccccccccCC-ChHHHHH--
Confidence 00 11111110000 00 0011111
Q ss_pred hccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCC---ccEEec--CCchhH--HHHhCceeccccc
Q 002391 834 VECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEAD---IGIGIS--GVEGMQ--IVLSGHDMRKCIQ 906 (928)
Q Consensus 834 ~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~Ad---vGIa~~--g~e~~~--a~~aaD~v~~~~~ 906 (928)
+..++|.+|.+|..+++.++. .+..|+|+|||.||++|++.|| |||+|+ |.+..+ ....||++..-+.
T Consensus 293 ----~~~~~~~~~~~k~~iv~~~~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~ 367 (380)
T d1qyia_ 293 ----ALYGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLG 367 (380)
T ss_dssp ----HHHCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGG
T ss_pred ----HHHHcCCCHHHHHHHHHHhCC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHH
Confidence 225778999999999999987 7889999999999999999999 899774 333311 1236999986433
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.81 E-value=8.8e-21 Score=170.00 Aligned_cols=108 Identities=21% Similarity=0.196 Sum_probs=87.5
Q ss_pred eEEEEeCCceE--EEeecccCCcCcEEEeccCCcCCceEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCchh
Q 002391 138 KVSVHVGNGVF--SYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDE 215 (928)
Q Consensus 138 ~~~V~~r~g~~--~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~ 215 (928)
.++|+ |+|++ ++|++++|+|||||.|++|+.+||||+||+... +.++||||+|||||.|+.|.+.+...
T Consensus 2 ~~kV~-R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~--~~l~vdes~lTGEs~pv~K~~~~~~~------ 72 (115)
T d1wpga1 2 MGKVY-RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGESVSVIKHTEPVPD------ 72 (115)
T ss_dssp EEEEE-BSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCCEEECHHHHSCCSCEECCCSCCCC------
T ss_pred ceEEE-ECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeec--cceEEEEeecccceEEEEeecccccc------
Confidence 57899 78874 789999999999999999999999999997543 45899999999999999998754321
Q ss_pred hhccCcEEEEecCCCCCcceEEEEEEECCeeeecCCCCeeecccEEecCCeEEEEEEEecCcceeeec
Q 002391 216 AFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQN 283 (928)
Q Consensus 216 ~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~gvVv~tG~~Tki~~~ 283 (928)
+.....+..|++|+||.+. .|+++++|++||.+|.+++.
T Consensus 73 ----------------------------~~~~~~~~~n~lf~GT~V~-~G~~~~~V~~tG~~T~~G~i 111 (115)
T d1wpga1 73 ----------------------------PRAVNQDKKNMLFSGTNIA-AGKALGIVATTGVSTEIGKI 111 (115)
T ss_dssp ----------------------------TTCCGGGCTTEECTTCEEE-ECEEEEEEEECGGGSHHHHH
T ss_pred ----------------------------cccccccccceEEeccEEE-eeeEEEEEEEEccccHHHHH
Confidence 1112234578888888887 47799999999999977653
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.29 E-value=7.7e-13 Score=150.07 Aligned_cols=73 Identities=18% Similarity=0.021 Sum_probs=67.6
Q ss_pred HHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhhcccccccCCCCCeEEecccchhhcccceEEEecCC--Cceeece
Q 002391 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKT--GTLTCNQ 430 (928)
Q Consensus 353 ~~~~~~~i~ll~~~iP~sL~v~l~~~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~E~Lg~v~~I~~DKT--GTLT~n~ 430 (928)
+..|..++++.+.++|++||+.++++..+++.+| ++++++||+...+|++|+..++|+||| +|||.|.
T Consensus 178 ~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rm----------ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~ 247 (472)
T d1wpga4 178 IYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNV 247 (472)
T ss_dssp GGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHH----------HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhH
Confidence 4577889999999999999999999999999999 899999999999999999999999998 9999998
Q ss_pred eEEEE
Q 002391 431 MDFLK 435 (928)
Q Consensus 431 m~v~~ 435 (928)
+.+..
T Consensus 248 ~~v~~ 252 (472)
T d1wpga4 248 GEVVC 252 (472)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87643
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.05 E-value=1.1e-10 Score=118.58 Aligned_cols=179 Identities=14% Similarity=0.111 Sum_probs=98.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccc----cCceEEEEeCC-----CcchHHHHHHHHHHhhHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR----QGMKQICITAL-----NSDSVGKAAKEAVKDNIL 788 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~----~~~~~i~~~~~-----~~~~~~~~~~~~~~~~~~ 788 (928)
.+.+.+.++|++|+++|++++++|||+...+..++..+++-. .++..+..... ...... . ..
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~-~--------~~ 89 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEW-I--------LW 89 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHH-H--------HH
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHH-H--------HH
Confidence 477889999999999999999999999999999998887632 12222211111 111000 0 00
Q ss_pred HHHHHhhhhhhcc-CCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcC--hhhHHHHHHHHhhc---CCC
Q 002391 789 MQITNASQMIKLE-RDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVS--PKQKALVTRLVKEG---TGK 862 (928)
Q Consensus 789 ~~~~~~~~~~~~~-~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~--P~qK~~iV~~l~~~---~g~ 862 (928)
..+.......... ........+.+.......-.-.++.+++...........+.... ...|...++.+.+. ...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~ 169 (230)
T d1wr8a_ 90 NEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPK 169 (230)
T ss_dssp HHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGG
T ss_pred HHHHHhcccccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchh
Confidence 1111110000000 00111111222222111100011112211111000111122233 34788888877654 346
Q ss_pred EEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 863 TTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 863 ~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
.|++||||.||++||+.||+||+|++.... ++.+||+|+..+.
T Consensus 170 ~~~~iGD~~NDi~ml~~ag~~vav~na~~~-~k~~A~~v~~~~~ 212 (230)
T d1wr8a_ 170 EVAHVGDGENDLDAFKVVGYKVAVAQAPKI-LKENADYVTKKEY 212 (230)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHTTCSEECSSCH
T ss_pred heeeeecCccHHHHHHHCCeEEEECCCCHH-HHHhCCEEECCCC
Confidence 799999999999999999999999766544 9999999987554
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=1.2e-10 Score=121.88 Aligned_cols=188 Identities=14% Similarity=0.104 Sum_probs=104.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCC----------------CcchHHHHHHH
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL----------------NSDSVGKAAKE 781 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~----------------~~~~~~~~~~~ 781 (928)
++.+.+.++|++|+++||+++++|||++..+..+.+++++..+....+..++. +.+........
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~~ 100 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKL 100 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHHH
Confidence 47788999999999999999999999999999999999876554333322221 11111111111
Q ss_pred HHHhhH-------------------HHHHHHhhhhhh-----c---cCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhh-
Q 002391 782 AVKDNI-------------------LMQITNASQMIK-----L---ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA- 833 (928)
Q Consensus 782 ~~~~~~-------------------~~~~~~~~~~~~-----~---~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~- 833 (928)
...... ............ . .........+.++......-....+...+....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (271)
T d1rkqa_ 101 SREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 180 (271)
T ss_dssp HHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHEE
T ss_pred HHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcceE
Confidence 110000 000000000000 0 000111222333332222111111222222111
Q ss_pred hccCeeEEEEcChh--hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 834 VECASVICCRVSPK--QKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 834 ~~~~~~v~~r~~P~--qK~~iV~~l~~~~---g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
.......+...+|. .|+..++.+.+.. ...+++||||.||++||+.|+.||+|++... +++..||+++.-..
T Consensus 181 ~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~-~lk~~a~~i~~~~~ 257 (271)
T d1rkqa_ 181 VLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIP-SVKEVANFVTKSNL 257 (271)
T ss_dssp EEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCCTT
T ss_pred EEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCH-HHHHhCCEEcCCCC
Confidence 00011113445555 6999999887642 3569999999999999999999999977654 49999999987433
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.03 E-value=1e-09 Score=115.26 Aligned_cols=65 Identities=18% Similarity=0.248 Sum_probs=53.4
Q ss_pred EEEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 841 CCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 841 ~~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+...+|. .|+..++.+.+..| ..|++||||.||.+||+.|+.||+|++.... ++..||+++.-..
T Consensus 204 ~ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~-~k~~A~~v~~~~~ 273 (285)
T d1nrwa_ 204 NFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARED-IKSIADAVTLTND 273 (285)
T ss_dssp EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHH-HHHHCSEECCCGG
T ss_pred EEEEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHH-HHHhCCEEcCCCC
Confidence 3456665 79999999976544 5799999999999999999999999776543 9999999987433
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.99 E-value=4.6e-10 Score=117.12 Aligned_cols=65 Identities=17% Similarity=0.123 Sum_probs=53.1
Q ss_pred EEEcChh--hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 841 CCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 841 ~~r~~P~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+..++|. .|+..++.+.+..| ..|++||||.||++||+.|+.||+|++... ++|..||+++.-..
T Consensus 181 ~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~-~lk~~A~~v~~~~~ 250 (269)
T d1rlma_ 181 FIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAE-NIKQIARYATDDNN 250 (269)
T ss_dssp EEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred eEEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCH-HHHHhCCEEcCCCC
Confidence 3566675 59999998876533 569999999999999999999999977654 39999999987544
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.93 E-value=2.6e-10 Score=115.79 Aligned_cols=179 Identities=14% Similarity=0.074 Sum_probs=99.1
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccc----cCceEEEEeCCCcchHHHHHHHHHHhhHHHHH
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR----QGMKQICITALNSDSVGKAAKEAVKDNILMQI 791 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (928)
+..+.+++.++++.|++.|++++++|||+...+..++...|+-. .++..+............ .+.+...+
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~------~~~~~~~~ 91 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFS------NEGTNKFL 91 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSC------SHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecC------hHHHHHHH
Confidence 34577899999999999999999999999999888888887632 122222111111000000 00000000
Q ss_pred HHhhhhhh-----ccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhh-hccCeeEEEEcCh--hhHHHHHHHHhhcC---
Q 002391 792 TNASQMIK-----LERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA-VECASVICCRVSP--KQKALVTRLVKEGT--- 860 (928)
Q Consensus 792 ~~~~~~~~-----~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~-~~~~~~v~~r~~P--~qK~~iV~~l~~~~--- 860 (928)
........ .............+...+..+. ....... ....+-.++...| ..|...++.+.+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~ 166 (225)
T d1l6ra_ 92 EEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVR-----KEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLE 166 (225)
T ss_dssp HHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHH-----HHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCC
T ss_pred HHHHHhcCcceeecccceeeeeccccCHHHHHHHH-----HHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccc
Confidence 00000000 0000111222222222222221 1111100 0000111233344 37988888775543
Q ss_pred CCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 861 GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 861 g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
...|++||||.||.+|++.|++||+|++.... ++..||+++.-+.
T Consensus 167 ~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~-~k~~ad~v~~~~~ 211 (225)
T d1l6ra_ 167 YDEILVIGDSNNDMPMFQLPVRKACPANATDN-IKAVSDFVSDYSY 211 (225)
T ss_dssp GGGEEEECCSGGGHHHHTSSSEEEECTTSCHH-HHHHCSEECSCCT
T ss_pred hhheeeecCCcchHHHHHHCCeEEEECCCcHH-HHHhCCEEECCCC
Confidence 35699999999999999999999999766554 9999999988776
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.91 E-value=5.6e-10 Score=116.41 Aligned_cols=64 Identities=19% Similarity=0.285 Sum_probs=52.0
Q ss_pred EEEcChh--hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceecccc
Q 002391 841 CCRVSPK--QKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCI 905 (928)
Q Consensus 841 ~~r~~P~--qK~~iV~~l~~~~---g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~ 905 (928)
+..++|. .|+..++.+.++. ...|++||||.||++||+.||+||+|++.... ++..||+++.-.
T Consensus 181 ~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~-~k~~A~~i~~~~ 249 (267)
T d1nf2a_ 181 YLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEK-VKEASDIVTLTN 249 (267)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHH-HHHHCSEECCCT
T ss_pred eeeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHH-HHHhCCEEcCCC
Confidence 3456665 6999999886653 35699999999999999999999999766544 999999998633
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.86 E-value=2.9e-09 Score=107.15 Aligned_cols=127 Identities=19% Similarity=0.264 Sum_probs=88.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
+++|++.+.|+.|+++|++++++||.....+.++++.+|+-..+ ++. +..
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~a-n~~--------------------------- 131 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFA-NRL--------------------------- 131 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEE-ECE---------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eee-eee---------------------------
Confidence 47899999999999999999999999999999999999984321 110 000
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc-CCCEEEEEcCCcccHHH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG-TGKTTLAIGDGANDVGM 876 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~-~g~~vlaiGDG~ND~~m 876 (928)
....+|....... .-....+..|+.+++.+++. ....++++|||.||++|
T Consensus 132 -----------~~~~~G~~~g~~~------------------~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~ 182 (217)
T d1nnla_ 132 -----------KFYFNGEYAGFDE------------------TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEA 182 (217)
T ss_dssp -----------EECTTSCEEEECT------------------TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTT
T ss_pred -----------eeeehhcccccee------------------eeeeeccchHHHHHHHHHhccCccccEEEEeCHhhHHH
Confidence 0000111000000 00013456799999998754 33579999999999999
Q ss_pred HHhCCccEEecCC-chhHHHHhCceecc
Q 002391 877 IQEADIGIGISGV-EGMQIVLSGHDMRK 903 (928)
Q Consensus 877 L~~AdvGIa~~g~-e~~~a~~aaD~v~~ 903 (928)
++.||+|||+.+. ...+++..+|++..
T Consensus 183 ~~~ag~~va~~~~~~~~~~~~~ad~~i~ 210 (217)
T d1nnla_ 183 CPPADAFIGFGGNVIRQQVKDNAKWYIT 210 (217)
T ss_dssp TTTSSEEEEECSSCCCHHHHHHCSEEES
T ss_pred HHhCCceEEECCCHHHHHHHHhCCCEeC
Confidence 9999999999754 33446778887643
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.84 E-value=9.1e-10 Score=115.41 Aligned_cols=57 Identities=12% Similarity=0.163 Sum_probs=47.6
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceecccc
Q 002391 848 QKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCI 905 (928)
Q Consensus 848 qK~~iV~~l~~~~---g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~ 905 (928)
.|...++.+.+.. ...|++||||.||.+||+.||+||+|++.... ++.+||+++...
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~-~k~~a~~v~~~~ 266 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDS-AKSHAKCVLPVS 266 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHH-HHHHSSEECSSC
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHH-HHHhCCEEECCc
Confidence 5888888776543 35799999999999999999999999776554 999999998754
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.81 E-value=4.8e-09 Score=101.23 Aligned_cols=99 Identities=13% Similarity=0.072 Sum_probs=78.1
Q ss_pred HHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhhhhccCCC
Q 002391 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (928)
Q Consensus 725 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (928)
.+|+.|+..|+.+.++||+....+...+.++++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 48999999999999999999999999998888731
Q ss_pred cCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCCcccHHHHHhCC
Q 002391 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEAD 881 (928)
Q Consensus 805 ~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~---~g~~vlaiGDG~ND~~mL~~Ad 881 (928)
++ .....|...++.+.+. ....|+++|||.||.+||+.|+
T Consensus 74 -----------------------------------~~--~~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g 116 (177)
T d1k1ea_ 74 -----------------------------------FF--LGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACG 116 (177)
T ss_dssp -----------------------------------EE--ESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS
T ss_pred -----------------------------------cc--cccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCC
Confidence 11 1233454444444332 3478999999999999999999
Q ss_pred ccEEecCCchhHHHHhCceeccccc
Q 002391 882 IGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 882 vGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+|++++++... ++..||||+.-..
T Consensus 117 ~siap~nA~~~-vk~~A~~Vt~~~G 140 (177)
T d1k1ea_ 117 TSFAVADAPIY-VKNAVDHVLSTHG 140 (177)
T ss_dssp EEEECTTSCHH-HHTTSSEECSSCT
T ss_pred eEEEcCCccHH-HHHhCCEEeCCCC
Confidence 99999877655 9999999998544
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.80 E-value=3.7e-09 Score=107.89 Aligned_cols=43 Identities=9% Similarity=0.014 Sum_probs=38.5
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+...+.+.++|++|+++|++++++|||+...+..+.+.+++-
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 4555678999999999999999999999999999999999763
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.78 E-value=7.3e-09 Score=107.27 Aligned_cols=64 Identities=22% Similarity=0.335 Sum_probs=52.0
Q ss_pred EEcChh--hHHHHHHHHhhc---CCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 842 CRVSPK--QKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 842 ~r~~P~--qK~~iV~~l~~~---~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
..+.|. .|+..++.+.++ ....+++||||.||++||+.|+.||+|++.... ++..||+++.-..
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~-lk~~A~~vt~~~~ 246 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKED-VKAAADYVTAPID 246 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHSSEECCCGG
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHH-HHHhCCEEeCCCC
Confidence 445554 699999888765 336799999999999999999999999776544 9999999987543
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=1.9e-07 Score=93.80 Aligned_cols=40 Identities=8% Similarity=0.087 Sum_probs=37.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (928)
.+.+.+.++|++|+++|++++++|||+...+..+..++++
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~ 60 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 60 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhcc
Confidence 4778999999999999999999999999999999999886
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.59 E-value=1.2e-07 Score=93.36 Aligned_cols=118 Identities=18% Similarity=0.063 Sum_probs=80.2
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
+..++....++.+ ..+.++.++|+.............++.......+......
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------- 121 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc--------------------------
Confidence 4556777777665 5789999999998888888888877643221111111100
Q ss_pred hhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHH
Q 002391 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (928)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL 877 (928)
.........+..+...++.++. ....|+|||||.||++||
T Consensus 122 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~i-~~~eviaiGDg~NDi~Ml 161 (206)
T d1rkua_ 122 ---------------------------------------RVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDSYNDTTML 161 (206)
T ss_dssp ---------------------------------------CEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECSSTTHHHH
T ss_pred ---------------------------------------ccccccccchhhHHHHHHHhcc-cccceEEecCCccCHHHH
Confidence 0112223344445566677765 688999999999999999
Q ss_pred HhCCccEEecCCchhHHHHhCceecc
Q 002391 878 QEADIGIGISGVEGMQIVLSGHDMRK 903 (928)
Q Consensus 878 ~~AdvGIa~~g~e~~~a~~aaD~v~~ 903 (928)
+.||+|||| +....-.++++||++.
T Consensus 162 ~~Ag~gIAm-na~~~v~~~~~~~~~~ 186 (206)
T d1rkua_ 162 SEAHAGILF-HAPENVIREFPQFPAV 186 (206)
T ss_dssp HHSSEEEEE-SCCHHHHHHCTTSCEE
T ss_pred HhCCccEEE-CCCHHHHHhCCCceee
Confidence 999999999 5544435677888864
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.54 E-value=1.6e-07 Score=95.72 Aligned_cols=56 Identities=18% Similarity=0.300 Sum_probs=46.3
Q ss_pred hhHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceecc
Q 002391 847 KQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRK 903 (928)
Q Consensus 847 ~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~ 903 (928)
..|+..++.+.+..| ..|+++|||.||.+||+.||.||+|++.... ++..||.+..
T Consensus 161 ~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~-lk~~a~~~~~ 219 (244)
T d1s2oa1 161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPE-LLHWYDQWGD 219 (244)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHH-HHHHHHHHCC
T ss_pred cchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHH-HHHHhhcccc
Confidence 469999998876544 5699999999999999999999999776655 8888885443
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.42 E-value=2.4e-07 Score=91.48 Aligned_cols=123 Identities=16% Similarity=0.121 Sum_probs=82.0
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCceEEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhh
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
.++.+++.+.++.++..|..+.++||.....+.......++...-...+......
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 128 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK------------------------- 128 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE-------------------------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc-------------------------
Confidence 4678999999999999999999999999988888888776642211111110000
Q ss_pred hhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEE--cChhhHHHHHHHHhhc---CCCEEEEEcCCc
Q 002391 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR--VSPKQKALVTRLVKEG---TGKTTLAIGDGA 871 (928)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r--~~P~qK~~iV~~l~~~---~g~~vlaiGDG~ 871 (928)
. ...... ..+..|...+..+.+. ....++|||||.
T Consensus 129 -------------------~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~ 168 (210)
T d1j97a_ 129 -------------------L---------------------TGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGA 168 (210)
T ss_dssp -------------------E---------------------EEEEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSG
T ss_pred -------------------c---------------------cccccccccccccccchhhhHHHHhcccccceEEecCCc
Confidence 0 000000 1112233333333221 346799999999
Q ss_pred ccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 872 NDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 872 ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
||++|++.||+||||.+.+. .+..||+++..++
T Consensus 169 nDi~m~~~ag~~va~na~~~--lk~~Ad~vi~~~d 201 (210)
T d1j97a_ 169 NDISMFKKAGLKIAFCAKPI--LKEKADICIEKRD 201 (210)
T ss_dssp GGHHHHHHCSEEEEESCCHH--HHTTCSEEECSSC
T ss_pred ChHHHHHHCCCCEEECCCHH--HHHhCCEEEcCCC
Confidence 99999999999999944443 8899999998665
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.37 E-value=2.4e-07 Score=92.81 Aligned_cols=61 Identities=16% Similarity=0.077 Sum_probs=45.4
Q ss_pred EEEcChh--hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCccEEecCCchhHHHHhCceeccccc
Q 002391 841 CCRVSPK--QKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQIVLSGHDMRKCIQ 906 (928)
Q Consensus 841 ~~r~~P~--qK~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~AdvGIa~~g~e~~~a~~aaD~v~~~~~ 906 (928)
+....|. .|+..++.+.+ ...+++|||+.||.+||+.|+.|++|+..+ ++..|+|.+.-+.
T Consensus 150 ~idi~p~g~~Kg~al~~l~~--~~~~i~~GDs~ND~~Mf~~~~~~~av~~g~---~~~~A~~~~~~~~ 212 (229)
T d1u02a_ 150 IIELRVPGVNKGSAIRSVRG--ERPAIIAGDDATDEAAFEANDDALTIKVGE---GETHAKFHVADYI 212 (229)
T ss_dssp EEEEECTTCCHHHHHHHHHT--TSCEEEEESSHHHHHHHHTTTTSEEEEESS---SCCCCSEEESSHH
T ss_pred EEEEecCCCCHHHHHHHHhc--cccceeecCCCChHHHHhccCCeEEEEeCC---CCccCeEEcCCHH
Confidence 4556665 69999999986 357899999999999999998887774322 2346777766443
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.29 E-value=5.7e-07 Score=90.25 Aligned_cols=113 Identities=13% Similarity=0.099 Sum_probs=81.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCce-EEEEeCCCcchHHHHHHHHHHhhHHHHHHHhhh
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMK-QICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
++.|++.+.++.|++.|+++.++||-....+..+.+.+|+...-.. .+.......
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~------------------------ 130 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYI------------------------ 130 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBC------------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcc------------------------
Confidence 4789999999999999999999999999999999998887432100 000000000
Q ss_pred hhhccCCCcCcEEEEEcCchhhHhhhHHHHHHHHhhhhccCeeEEEEcChhhHHHHHHHHhhcCCCEEEEEcCCcccHHH
Q 002391 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (928)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~~v~~r~~P~qK~~iV~~l~~~~g~~vlaiGDG~ND~~m 876 (928)
...+... ....++...|..|..+++.++. .+..|++|||+.||++|
T Consensus 131 --------------~~~~~~~-------------------~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iGDs~~Dl~~ 176 (226)
T d2feaa1 131 --------------HIDWPHS-------------------CKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGDSVTDVEA 176 (226)
T ss_dssp --------------EEECTTC-------------------CCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEECCGGGHHH
T ss_pred --------------eeccccc-------------------cccccccCCHHHHHHHHHHhcC-CCceEEEEeCchhhHHH
Confidence 0000000 0112334678889999999887 78899999999999999
Q ss_pred HHhCCccEEecC
Q 002391 877 IQEADIGIGISG 888 (928)
Q Consensus 877 L~~AdvGIa~~g 888 (928)
++.||+++++.+
T Consensus 177 a~~A~~~~a~~~ 188 (226)
T d2feaa1 177 AKLSDLCFARDY 188 (226)
T ss_dssp HHTCSEEEECHH
T ss_pred HHHCCEEEEecc
Confidence 999999999854
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.27 E-value=2.8e-07 Score=92.99 Aligned_cols=59 Identities=15% Similarity=0.236 Sum_probs=48.6
Q ss_pred EcChh--hHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHhCC-ccEEecCCchhHHHHhCceec
Q 002391 843 RVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEAD-IGIGISGVEGMQIVLSGHDMR 902 (928)
Q Consensus 843 r~~P~--qK~~iV~~l~~~~g~~vlaiGD----G~ND~~mL~~Ad-vGIa~~g~e~~~a~~aaD~v~ 902 (928)
.++|. .|+..++.+.+.....|++||| |.||.+||+.|+ .|++|++.+.. ++..+|+++
T Consensus 178 ei~~~~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~-~k~~~~~~~ 243 (244)
T d2fuea1 178 DVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT-VQRCREIFF 243 (244)
T ss_dssp EEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH-HHHHHHHHC
T ss_pred eecchhccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHH-HHHHHHhcC
Confidence 44454 5999999997766689999999 569999999998 69999877665 899988875
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.95 E-value=4e-06 Score=84.28 Aligned_cols=52 Identities=23% Similarity=0.296 Sum_probs=40.1
Q ss_pred hHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHhCC-ccEEecCCchhHHHHhCcee
Q 002391 848 QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEAD-IGIGISGVEGMQIVLSGHDM 901 (928)
Q Consensus 848 qK~~iV~~l~~~~g~~vlaiGD----G~ND~~mL~~Ad-vGIa~~g~e~~~a~~aaD~v 901 (928)
.|+..++.+.+.....|++||| |.||.+||+.|+ .|+++++.+. +++.++.+
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~--~~~~~~~l 241 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED--TRRICELL 241 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH--HHHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH--HHHHHHHH
Confidence 6988888887656688999999 889999999998 6888866544 77766654
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.25 E-value=0.00011 Score=66.82 Aligned_cols=107 Identities=16% Similarity=0.262 Sum_probs=74.7
Q ss_pred cCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceeEEEEEcCCCcEEEEEccchh
Q 002391 551 AESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADS 630 (928)
Q Consensus 551 ~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~ 630 (928)
+.||..+|++++|++.+...... ..+.-...++|+...+...+.+ +| ..+..|++.
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~g~~~---~g--~~v~~G~~~ 84 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERD-------------------VQSLHATFVPFTAQSRMSGINI---DN--RMIRKGSVD 84 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCC-------------------TTTTTCEEEEEETTTTEEEEEE---TT--EEEEEECHH
T ss_pred CCchHHHHHHHHHHHhcCCCccc-------------------cccccccccccccccceEEEEE---CC--EEEEecHHH
Confidence 68999999999999765332110 0011112345555554444333 23 356679998
Q ss_pred hhHHhhcccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcccEEE
Q 002391 631 IIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILV 710 (928)
Q Consensus 631 ~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~l~~~r~~~l~~~~~~ie~dl~ll 710 (928)
.|...+...+......+...++++..+|.+++.+| .|-.++
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va---------------------------------------~d~~~~ 125 (136)
T d2a29a1 85 AIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRVL 125 (136)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEE---------------------------------------ETTEEE
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEE---------------------------------------ECCEEE
Confidence 88777766555567788899999999999999999 466899
Q ss_pred eeeeecccCC
Q 002391 711 GATAVEDKLQ 720 (928)
Q Consensus 711 G~~~i~D~lr 720 (928)
|++++.|++|
T Consensus 126 G~i~l~D~iK 135 (136)
T d2a29a1 126 GVIALKDIVK 135 (136)
T ss_dssp EEEEEEESSC
T ss_pred EEEEEEeecC
Confidence 9999999986
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.74 E-value=0.00096 Score=68.26 Aligned_cols=46 Identities=15% Similarity=0.298 Sum_probs=41.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccccCce
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMK 763 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~~~~~ 763 (928)
+||+|+++.++.|++.|+++.++||--...+.+++++.|+..++..
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~ 180 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVK 180 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCce
Confidence 4899999999999999999999999999999999999998655433
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=96.51 E-value=0.0031 Score=61.33 Aligned_cols=41 Identities=15% Similarity=0.162 Sum_probs=38.0
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.|++.++|+.|++.|+++.++||.....+..+.+..|+.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~ 128 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR 128 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 34699999999999999999999999999999999999984
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=96.32 E-value=0.0028 Score=61.83 Aligned_cols=42 Identities=19% Similarity=0.202 Sum_probs=38.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~ 759 (928)
++.++++++++.|++.|++++++||.....+..+.+.+||..
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~ 136 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH 136 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchh
Confidence 467999999999999999999999999999999999999853
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.31 E-value=0.0012 Score=60.47 Aligned_cols=31 Identities=23% Similarity=0.249 Sum_probs=28.4
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchh
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ 746 (928)
++++.+++.+.++.|+++|++++++||++..
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~ 64 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESG 64 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHH
Confidence 5788999999999999999999999999754
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.14 E-value=0.0046 Score=60.66 Aligned_cols=42 Identities=19% Similarity=0.176 Sum_probs=37.5
Q ss_pred cCCCChHHHHHHHHHcC-CcEEEEcCCchhhHHHHHHHccccc
Q 002391 718 KLQKGVPQCIDKLAQAG-LKIWVLTGDKMETAINIGFACSLLR 759 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aG-Ikv~mlTGD~~~ta~~ia~~~gii~ 759 (928)
++-||+.++++.|++.| +++.++||.....+..+.+..||..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~ 133 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 133 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc
Confidence 45689999999999987 8999999999999999999999853
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.13 E-value=0.0034 Score=60.43 Aligned_cols=40 Identities=15% Similarity=0.175 Sum_probs=33.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+.|++.++++.|++.|+++.++|+... .+..+.+..|+.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~ 121 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVE 121 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCG
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccc
Confidence 4679999999999999999999998654 556677777874
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.08 E-value=0.0086 Score=55.50 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=30.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCch-hhHHHHHHHccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKM-ETAINIGFACSL 757 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~-~ta~~ia~~~gi 757 (928)
++.|++.++++.|+++|+++.++|+-+. ..+....+..++
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~ 86 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDL 86 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccc
Confidence 5789999999999999999999997554 334444444443
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.01 E-value=0.0073 Score=58.13 Aligned_cols=42 Identities=12% Similarity=0.199 Sum_probs=36.4
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~ 759 (928)
-++.+++.+.++.|+..+ ++.++|+-....+..+....|+..
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~ 124 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHH 124 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGG
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccc
Confidence 357799999999999775 899999999999999999998853
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.73 E-value=0.0088 Score=56.60 Aligned_cols=40 Identities=15% Similarity=0.270 Sum_probs=32.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.+.+|+++.|+.|++.|++++++|+.+... ..+.+..++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccc
Confidence 467999999999999999999999976544 4566777764
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=95.40 E-value=0.015 Score=54.74 Aligned_cols=45 Identities=13% Similarity=0.154 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCcccHHHHHhCCcc--EEec-CC-chhHHHHhCceeccc
Q 002391 860 TGKTTLAIGDGANDVGMIQEADIG--IGIS-GV-EGMQIVLSGHDMRKC 904 (928)
Q Consensus 860 ~g~~vlaiGDG~ND~~mL~~AdvG--Ia~~-g~-e~~~a~~aaD~v~~~ 904 (928)
....++||||..+|+.|=+.|+++ +.+. |. ........||++...
T Consensus 124 ~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~ 172 (182)
T d2gmwa1 124 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS 172 (182)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC
T ss_pred ccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECC
Confidence 346799999999999999999996 3342 32 122255679998653
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=95.07 E-value=0.007 Score=60.49 Aligned_cols=41 Identities=27% Similarity=0.255 Sum_probs=37.7
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.+|+.++++.|++.|+++.++||.+...+..+.+..|+.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~ 139 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 139 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc
Confidence 57899999999999999999999999999999888888874
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=94.75 E-value=0.0093 Score=57.34 Aligned_cols=41 Identities=12% Similarity=0.222 Sum_probs=35.7
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~ 759 (928)
++.|++.++++.|+ +++++.++|+.....+..+.+..|+..
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~ 122 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMM 122 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGG
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccc
Confidence 35689999999997 479999999999999999999988753
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.35 E-value=0.0037 Score=62.63 Aligned_cols=36 Identities=8% Similarity=0.172 Sum_probs=31.0
Q ss_pred CCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHc
Q 002391 720 QKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (928)
Q Consensus 720 r~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (928)
=+++.++|+.|+++|++++++|+....+...++..+
T Consensus 20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 378899999999999999999998877777776654
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.20 E-value=0.032 Score=53.06 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=33.1
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCch----hhHHHHHHHccccc
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDKM----ETAINIGFACSLLR 759 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~~----~ta~~ia~~~gii~ 759 (928)
+.+++.+.++.+++.|++|+.+|||.. .|+.++-+.+|+-.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~ 131 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA 131 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCc
Confidence 347999999999999999999999975 35666666677743
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=93.60 E-value=0.05 Score=53.08 Aligned_cols=43 Identities=14% Similarity=0.183 Sum_probs=37.9
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
.-.+.|++.+++++|++.|+++.++|+............+|+.
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~ 167 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 167 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence 3456899999999999999999999999998888888888864
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.54 E-value=0.055 Score=52.51 Aligned_cols=40 Identities=15% Similarity=0.106 Sum_probs=34.9
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHcccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii 758 (928)
++.|++.++++.|+ +|++++++|+-.......+.+.+|+.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~ 139 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIK 139 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCG
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccc
Confidence 46799999999996 58999999998888888888888874
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=93.42 E-value=0.063 Score=51.57 Aligned_cols=26 Identities=23% Similarity=0.339 Sum_probs=23.5
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCC
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGD 743 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD 743 (928)
++-|++.++|+.|+++|+++.++|..
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred EecccHHHHHHHHHhhCCeEEEeccc
Confidence 46799999999999999999999963
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.62 E-value=0.091 Score=51.37 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=34.9
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccc
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~ 759 (928)
+-+++.++++.|+ .|++++++|+..........+.+|+..
T Consensus 110 ~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~ 149 (247)
T d2gfha1 110 LADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQS 149 (247)
T ss_dssp CCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred cCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccc
Confidence 5689999999998 589999999998888888888888753
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=91.43 E-value=0.65 Score=45.21 Aligned_cols=47 Identities=13% Similarity=0.129 Sum_probs=33.2
Q ss_pred eeeecccCCCChHHHHHHHHHcCCcEEEEcC---CchhhHHHHHHHcccc
Q 002391 712 ATAVEDKLQKGVPQCIDKLAQAGLKIWVLTG---DKMETAINIGFACSLL 758 (928)
Q Consensus 712 ~~~i~D~lr~~~~~~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gii 758 (928)
.+.-.+++=+++.++|+.|+++|++++++|+ +........-+++|+-
T Consensus 13 TL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 13 VLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred eeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 3333444447999999999999999999985 4445554545567763
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=90.81 E-value=0.088 Score=50.47 Aligned_cols=42 Identities=17% Similarity=0.119 Sum_probs=34.4
Q ss_pred cccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccc
Q 002391 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (928)
Q Consensus 716 ~D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~ 759 (928)
..++-+++.+.++.|++.|+++.++|+... +..+....|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 356789999999999999999999999754 566777777753
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=90.34 E-value=0.12 Score=47.30 Aligned_cols=26 Identities=31% Similarity=0.455 Sum_probs=23.6
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCC
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGD 743 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD 743 (928)
++-|++.++|+.|++.|++++++|..
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 45689999999999999999999975
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=88.13 E-value=4.6 Score=38.81 Aligned_cols=42 Identities=12% Similarity=0.141 Sum_probs=31.0
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCc---hhhHHHHHHHcccc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDK---METAINIGFACSLL 758 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~---~~ta~~ia~~~gii 758 (928)
+++=+++.++|+.|+++|++++++|+.. ...........|+-
T Consensus 22 ~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~ 66 (261)
T d1vjra_ 22 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 66 (261)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccc
Confidence 3444899999999999999999999654 44444445566763
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=85.32 E-value=0.8 Score=43.08 Aligned_cols=42 Identities=19% Similarity=0.247 Sum_probs=36.4
Q ss_pred cCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHccccc
Q 002391 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (928)
Q Consensus 718 ~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gii~ 759 (928)
.+.+++.++++.|++.|+++.++|+-....+.......++..
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~ 134 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD 134 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccc
Confidence 456899999999999999999999998888888887777654
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.10 E-value=0.16 Score=48.28 Aligned_cols=28 Identities=18% Similarity=0.262 Sum_probs=24.6
Q ss_pred CCCChHHHHHHHHHcCCcEEEEcCCchh
Q 002391 719 LQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (928)
Q Consensus 719 lr~~~~~~I~~L~~aGIkv~mlTGD~~~ 746 (928)
+.+++.+.++.|++.|++++++|+....
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~ 127 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLD 127 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred CCccHHHHHHHHHhccCccccccccchh
Confidence 5689999999999999999999976544
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=84.45 E-value=1.3 Score=42.98 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=29.9
Q ss_pred ccCCCChHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHc
Q 002391 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (928)
Q Consensus 717 D~lr~~~~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (928)
+.+=+++.++|+.|+++|++++++|+....+...+++.+
T Consensus 17 ~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l 55 (253)
T d1wvia_ 17 KDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEML 55 (253)
T ss_dssp TEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 333488999999999999999999986665555555543
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=83.21 E-value=0.44 Score=45.05 Aligned_cols=37 Identities=8% Similarity=0.140 Sum_probs=28.0
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCc-cEEec
Q 002391 850 ALVTRLVKEGTGKTTLAIGDGANDVGMIQEADI-GIGIS 887 (928)
Q Consensus 850 ~~iV~~l~~~~g~~vlaiGDG~ND~~mL~~Adv-GIa~~ 887 (928)
..+++.+.- ....++||||...|+.+-+.||+ +|.+.
T Consensus 164 ~~~~~~~~v-~p~~~l~IgD~~~Di~~A~~aG~~ti~V~ 201 (222)
T d1cr6a1 164 NFLLDTLKA-KPNEVVFLDDFGSNLKPARDMGMVTILVH 201 (222)
T ss_dssp HHHHHHHTS-CTTSEEEEESSSTTTHHHHHHTCEEEECC
T ss_pred HHHHHHhCC-CcceEEEEECCHHHHHHHHHcCCEEEEEC
Confidence 344555553 45679999999999999999997 56663
|