Citrus Sinensis ID: 002424

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920----

MAGILKPPGAFAVTPHKVSVCILIQMYAPPAMMSVPFPFSSVAQHNRFGLYLFALTKSCEDILEPKLDELINQLREIGDVLYQWLTDQLISRLSSLSSPDDLFNLFSDLRAILGGTDLSAVDDEQVVLDPNSNLGMFVRRCLLAFNLLCFEGVCHLLTSIGIYCKEALSSCSAYELPCLDDSSNELEALSEYENMDLENIVFEKVNKEIEARKKASEEVSFHLHAPKALFGLVEDIKVSAVSKSQGGDKCREASPSAHAPNDAMREFDSISGAFLRTNWQMQGYLMEQADAIEKHGSSFSLNAFELILRQLQKLAPELHRVHFLRYLNSLYHDDYFAALENLHRYFDYSAGTEGFDFAQPSIGCNSFGRYEIALLCLGMMHFHFGHPKQALDVLTEAVCLSQQHSNDTCLAYTLAAISNLLSEIGISTTTGILGSSYSPITSIGTTLSVQQQLFVLLKESFRRAESLKLKRLVAANHLAMAKFDLTHVQRPLLSFGPKTAMRLRTCPTNVCKELRLASHLISDFVSESSTMTTDGAFSTSWLKNLQKPMGSLVLTQENVSGKDSNAFQFCAQPSSIPGSVLQLVGSSYLLRATAWEAYGSAPLTRVNTLIYATCFSDGSSLSDAALAHVKLIQHLAVFKGYKEAFSALKIAEEKFLSVSKSRILLLKLQLLHERSLHRGHLKLAQKVCDELGVMASSVTGVDMDLKTEASLRHARTLLAANQFSEAAAVAHSLFCMCYKFNLQVENASVLLLLAEIHKKSGNAVLGIPYALASLSFCQLLNLDLLKASATLTLAELWLSFGPNHAKMASNLIQQALPLILGHGGLELRARAFIAEAKCLLSDPSFSVSQNPEAVLDPLRQASEELQVLEDHELAAEAFYLIAIVFDKLGRLAEREEAAALFKEYVLALENENRQDEVDPLLSTP

ccccccccccccccHHHHHHHHHHHHcccccccccccccccHHHHHHcHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHcccccccccccccccccccccccccHHHcccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHcccccHHHHHHHHcccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccccc

********GAFAVTPHKVSVCILIQMYAPPAMMSVPFPFSSVAQHNRFGLYLFALTKSCEDILEPKLDELINQLREIGDVLYQWLTDQLISRLSSLSSPDDLFNLFSDLRAILGGTDLSAVDDEQVVLDPNSNLGMFVRRCLLAFNLLCFEGVCHLLTSIGIYCKEALSSCSAYELPC********EALSEYENMDLENIVFEKVNKEIEA*******VSFHLHAPKALFGLVEDIKV******************************SISGAFLRTNWQMQGYLMEQADAIEKHGSSFSLNAFELILRQLQKLAPELHRVHFLRYLNSLYHDDYFAALENLHRYFDYSAGTEGFDFAQPSIGCNSFGRYEIALLCLGMMHFHFGHPKQALDVLTEAVCLSQQHSNDTCLAYTLAAISNLLSEIGISTTTGILGSSYSPITSIGTTLSVQQQLFVLLKESFRRAESLKLKRLVAANHLAMAKFDLTHVQRPLLSFGPKTAMRLRTCPTNVCKELRLASHLISDFVSES*TMTTDGAFSTSWLKNLQKPMGSLVLT***VSGKDSNAFQFCAQPSSIPGSVLQLVGSSYLLRATAWEAYGSAPLTRVNTLIYATCFSDGSSLSDAALAHVKLIQHLAVFKGYKEAFSALKIAEEKFLSVSKSRILLLKLQLLHERSLHRGHLKLAQKVCDELGVMASSVTGVDMDLKTEASLRHARTLLAANQFSEAAAVAHSLFCMCYKFNLQVENASVLLLLAEIHKKSGNAVLGIPYALASLSFCQLLNLDLLKASATLTLAELWLSFGPNHAKMASNLIQQALPLILGHGGLELRARAFIAEAKCLLSD************LDPLRQASEELQVLEDHELAAEAFYLIAIVFDKLGRLAEREEAAALFKEYVLALE***************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Anaphase-promoting complex subunit 5	Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication.	probable	Q8H1U4

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1HZ4, chain A
Confidence level:confident
Coverage over the Query: 584-904
View the alignment between query and template
View the model in PyMOL

Template: 2KAT, chain A
Confidence level:probable
Coverage over the Query: 307-350,369-422
View the alignment between query and template
View the model in PyMOL