Citrus Sinensis ID: 002430
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 923 | 2.2.26 [Sep-21-2011] | |||||||
| Q7XPY2 | 951 | Plasma membrane ATPase OS | yes | no | 0.994 | 0.965 | 0.884 | 0.0 | |
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 0.995 | 0.965 | 0.875 | 0.0 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | yes | no | 0.991 | 0.964 | 0.872 | 0.0 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.994 | 0.965 | 0.861 | 0.0 | |
| P19456 | 948 | ATPase 2, plasma membrane | no | no | 0.992 | 0.966 | 0.865 | 0.0 | |
| P20649 | 949 | ATPase 1, plasma membrane | no | no | 0.991 | 0.964 | 0.862 | 0.0 | |
| Q9M2A0 | 948 | ATPase 8, plasma membrane | no | no | 0.988 | 0.962 | 0.840 | 0.0 | |
| Q42556 | 954 | ATPase 9, plasma membrane | no | no | 1.0 | 0.967 | 0.834 | 0.0 | |
| P20431 | 949 | ATPase 3, plasma membrane | no | no | 0.994 | 0.967 | 0.842 | 0.0 | |
| Q9SH76 | 949 | ATPase 6, plasma membrane | no | no | 0.990 | 0.963 | 0.835 | 0.0 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1655 bits (4287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 818/925 (88%), Positives = 879/925 (95%), Gaps = 7/925 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG LEEIKNE+VDLE IPIEEVFEQLKC+REGL+S+EG R+ +FGPNKLEEKKE
Sbjct: 1 MGG-----LEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKE 55
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVME AAIMAIALANGGG+ PDW+DFVGIIVLLVINSTISFIEEN
Sbjct: 56 SKILKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEEN 115
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMANLAPKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 116 NAGNAAAALMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLK 175
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 176 IDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 235
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQ VLTAIGNFCICSIAVGIV EII+M+P+QHR YR GI+NLLVLLIGGIPIAMPTVLSV
Sbjct: 236 FQTVLTAIGNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSV 295
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGV+K
Sbjct: 296 TMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDK 355
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
+HV+LLAARASRTENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 356 DHVLLLAARASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 415
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+EDV++KVHAVIDK+AERGLRSL VARQE+PEK+KES G
Sbjct: 416 GNWHRASKGAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGG 475
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIR+AL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 476 PWQFVGLLPLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 535
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQ+KDAS+ ALPVDELIEKADGFAGVFPEHKYEIVKRLQE+KHI GMTGDGVNDAPA
Sbjct: 536 ALLGQNKDASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPA 595
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIR
Sbjct: 596 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIR 655
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IVLGF+LIALIWK+DFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATG+V
Sbjct: 656 IVLGFLLIALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIV 715
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LGSYLA+MTV+FFW M KTDFF+D FGVRS+R EMM+ALYLQVSI+SQALIFVTRSR
Sbjct: 716 LGSYLALMTVIFFWAMHKTDFFTDKFGVRSIRNSEHEMMSALYLQVSIVSQALIFVTRSR 775
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSFIERPGLLL TAF++AQLVATF+AVYANW FARI+G GWGWAGVIWLYS+V YFPLD
Sbjct: 776 SWSFIERPGLLLVTAFMLAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYFPLD 835
Query: 841 ILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPE--TNGI 898
I KF IR++LSG+AWD LLENK AFTTKKDYG+EEREAQWA AQRTLHGLQPPE +N +
Sbjct: 836 IFKFFIRFVLSGRAWDNLLENKIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVASNTL 895
Query: 899 FSDKNSYRELSEIAEQAKRRAEVAR 923
F+DK+SYRELSEIAEQAKRRAE+AR
Sbjct: 896 FNDKSSYRELSEIAEQAKRRAEIAR 920
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1648 bits (4267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 805/919 (87%), Positives = 872/919 (94%)
Query: 5 KAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVL 64
KAISLEEIKNE+VDLE+IPIEEVFEQLKC+REGL++DEGA RL +FGPNKLEEK ESK+L
Sbjct: 3 KAISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKIL 62
Query: 65 KFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGN 124
KFLGFMWNPLSWVMEAAA+MAIALANG G+ PDWQDF+GII LLVINSTISFIEENNAGN
Sbjct: 63 KFLGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAGN 122
Query: 125 AAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQS 184
AAAALMA LAPKTKVLRDGRWSEQ+A+ILVPGD+IS+KLGDI+PADARLLEGDPLKIDQS
Sbjct: 123 AAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQS 182
Query: 185 ALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKV 244
ALTGESLPVTKNP DEVFSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTN VGHFQKV
Sbjct: 183 ALTGESLPVTKNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKV 242
Query: 245 LTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304
LTAIGNFCICSIA+G++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI
Sbjct: 243 LTAIGNFCICSIAIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 302
Query: 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVI 364
GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNL+EVFAKGV+KE+V+
Sbjct: 303 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEYVL 362
Query: 365 LLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWH 424
LLAARASR ENQDAIDA +VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID++ NWH
Sbjct: 363 LLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNWH 422
Query: 425 RASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQL 484
RASKGAPEQIL LCN +EDVR+KVH+++DK+AERGLRSL VAR+ +PEK+KESPG W+
Sbjct: 423 RASKGAPEQILDLCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKESPGGRWEF 482
Query: 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 544
VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+SLLG
Sbjct: 483 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG 542
Query: 545 QDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604
QDKD++IA+LP++ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKA
Sbjct: 543 QDKDSAIASLPIEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKA 602
Query: 605 DIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 664
DIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV G
Sbjct: 603 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 662
Query: 665 FMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSY 724
FM IALIWK+DFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y
Sbjct: 663 FMFIALIWKYDFSAFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGGY 722
Query: 725 LAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSF 784
A+MTVVFFW M TDFFSD FGV+SLR +EMM+ALYLQVSIISQALIFVTRSRSWSF
Sbjct: 723 QALMTVVFFWAMHDTDFFSDKFGVKSLRNSDEEMMSALYLQVSIISQALIFVTRSRSWSF 782
Query: 785 IERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKF 844
+ERPG+LL AF+IAQLVAT IAVYANW+FAR++GCGWGWAGVIWLYS++ Y PLDI+KF
Sbjct: 783 LERPGMLLVIAFMIAQLVATLIAVYANWAFARVKGCGWGWAGVIWLYSIIFYLPLDIMKF 842
Query: 845 GIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNS 904
IRYILSGKAW+ LL+NKTAFTTKKDYGKEEREAQWA AQRTLHGLQPPE +F++KNS
Sbjct: 843 AIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATNLFNEKNS 902
Query: 905 YRELSEIAEQAKRRAEVAR 923
YRELSEIAEQAKRRAE+AR
Sbjct: 903 YRELSEIAEQAKRRAEMAR 921
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 1645 bits (4260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 798/915 (87%), Positives = 860/915 (93%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLG 68
L+ IKNESVDL RIP+EEVFE+LKC+++GLT++E +HRL VFGPNKLEEKKESK+LKFLG
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 69 FMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 128
FMWNPLSWVME AA+MAIALANGGGR PDWQDFVGI+ LL+INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 129 LMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
LMA LAPKTKVLRD +WSEQ+ASILVPGDVISIKLGDI+PADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ES+PVTKNP DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI+ E+++MYP+Q R+YRDGIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVD+NL+EVFAKGV KEHV LLAA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
RASR ENQDAIDAAIVGMLADPKEARAGVREVHF PFNPVDKRTALTY+DSDGNWHRASK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL LCNC+EDVR+KVH VIDKFAERGLRSL VARQE+ EK K++PG PWQLVGLL
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
+S+ ALPVDELIEKADGFAGVFPEHKYEIV RLQ+R HICGMTGDGVNDAPALKKADIGI
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
AV DATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM I
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDFSPFMVLIIAILNDGTIMTISKDR+KPSPQPDSWKL++IF+TGVVLG Y A+M
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERP 788
TVVFFW+M+ +DFFS+ FGVR L RP++MMAALYLQVSIISQALIFVTRSRSWS+ E P
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECP 783
Query: 789 GLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 848
GLLL AFVIAQLVATFIAVYANWSFARIEG GWGWAGVIWLYS +TY PLD+LKFGIRY
Sbjct: 784 GLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRY 843
Query: 849 ILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYREL 908
+LSGKAW LLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQP E N IF++KNSY EL
Sbjct: 844 VLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSEL 903
Query: 909 SEIAEQAKRRAEVAR 923
S+IAEQAKRRAEV R
Sbjct: 904 SQIAEQAKRRAEVVR 918
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1609 bits (4167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 797/925 (86%), Positives = 868/925 (93%), Gaps = 7/925 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG LEEI+NE+VDLE IPIEEVFEQLKC+R+GLTSDEGA R+ +FG NKLEEKKE
Sbjct: 1 MGG-----LEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKE 55
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SKVLKFLGFMWNPLSWVME AAIMAIALANGGG+ PDWQDFVGIIVLLVINSTISFIEEN
Sbjct: 56 SKVLKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEEN 115
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMANLAPKTKVLRDGRW EQ+ASILVPGD++SIKLGDIVPADARLLEGDPLK
Sbjct: 116 NAGNAAAALMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLK 175
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQS LTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 176 IDQSGLTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 235
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQ+VLTAIGNFCI SIAVGIV EII+M+P+Q RKYR GI+NLLVLLIGGIPIAMPTVLSV
Sbjct: 236 FQQVLTAIGNFCIVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSV 295
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSH+LSQQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKL+VD+NL+EVFAKGV+K
Sbjct: 296 TMAIGSHKLSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDK 355
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASR ENQDAIDA +VGMLADPKEARAG+REVHFLPFNP DKRTALTYID++
Sbjct: 356 EHVLLLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAE 415
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQI+ LCNC+EDV++KVH+VI+K+AERGLRSL VARQE+PEK+K+SPG
Sbjct: 416 GNWHRASKGAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGG 475
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ +GLLPLFDPPRHDSAETIR+AL LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 476 PWQFIGLLPLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 535
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQ KD S+ +LPVDELIEKADGFAGVFPEHKYEIVKRLQE+KHI GMTGDGVNDAPA
Sbjct: 536 ALLGQSKDGSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPA 595
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIR
Sbjct: 596 LKKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIR 655
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IVLGFMLIALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV
Sbjct: 656 IVLGFMLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVV 715
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG+YLA++TVVFFWL+ KTDFF++ FGV S+R + M+ALYLQVSI+SQALIFVTRSR
Sbjct: 716 LGTYLALVTVVFFWLIHKTDFFTNKFGVESIRNTEFKEMSALYLQVSIVSQALIFVTRSR 775
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPG LL TAF++AQLVAT IAVYANW FARI+G GWGWAGVIWL+S+V YFPLD
Sbjct: 776 SWSFVERPGFLLVTAFLLAQLVATLIAVYANWDFARIKGIGWGWAGVIWLFSIVFYFPLD 835
Query: 841 ILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPE--TNGI 898
I KF IR++LSG+AWD LL+NKTAFTTK++YGK EREAQWA AQRTLHGLQ PE ++ +
Sbjct: 836 IFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTL 895
Query: 899 FSDKNSYRELSEIAEQAKRRAEVAR 923
F+DK+SYRELSEIAEQAKRRAE+AR
Sbjct: 896 FNDKSSYRELSEIAEQAKRRAEIAR 920
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P19456|PMA2_ARATH ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1601 bits (4145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 793/916 (86%), Positives = 846/916 (92%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFL 67
SLE+IKNE+VDLE+IPIEEVF+QLKCSREGLT+ EG R+ +FGPNKLEEKKESK+LKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 68 GFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAA 127
GFMWNPLSWVME AAIMAIALANG GR PDWQDFVGII LLVINSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 128 ALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
ALMA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSIA+G+V EII+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L A
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
A ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID GNWHR S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQIL L D+ KKV ++IDK+AERGLRSL VARQ +PEKTKESPGAPW+ VGL
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607
DA++A++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 608 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
IAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFML
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML 662
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
IALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y AI
Sbjct: 663 IALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 787
MTV+FFW KTDFFSD FGVRS+R E+M A+YLQVSIISQALIFVTRSRSWSF+ER
Sbjct: 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVER 782
Query: 788 PGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847
PG LL AF+IAQL+AT IAVYANW FA+I G GWGWAGVIWLYS+VTYFPLD+ KF IR
Sbjct: 783 PGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIR 842
Query: 848 YILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRE 907
YILSGKAW L ENKTAFT KKDYGKEEREAQWA AQRTLHGLQP E IF +K SYRE
Sbjct: 843 YILSGKAWLNLFENKTAFTMKKDYGKEEREAQWALAQRTLHGLQPKEAVNIFPEKGSYRE 902
Query: 908 LSEIAEQAKRRAEVAR 923
LSEIAEQAKRRAE+AR
Sbjct: 903 LSEIAEQAKRRAEIAR 918
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20649|PMA1_ARATH ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1597 bits (4135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 789/915 (86%), Positives = 852/915 (93%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLG 68
LE+IKNE+VDLE+IPIEEVF+QLKC+REGLT+ EG R+ +FGPNKLEEKKESK+LKFLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 69 FMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 128
FMWNPLSWVMEAAA+MAIALANG R PDWQDFVGII LLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 129 LMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
LMA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI EI++MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSDGNWHR SK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL L N R D+RKKV + IDK+AERGLRSL VARQ +PEKTKESPG PW+ VGLL
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS++LLG DKD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
++IA++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
AVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFMLI
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATG+VLG Y AIM
Sbjct: 664 ALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIM 723
Query: 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERP 788
+V+FFW KTDFFSD FGVRS+R DE+M A+YLQVSIISQALIFVTRSRSWSF+ERP
Sbjct: 724 SVIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERP 783
Query: 789 GLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 848
G LL AFVIAQLVAT IAVYA+W+FA+++G GWGWAGVIW+YS+VTYFP DILKF IRY
Sbjct: 784 GALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRY 843
Query: 849 ILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYREL 908
ILSGKAW +L +N+TAFTTKKDYG EREAQWA AQRTLHGLQP E IF +K SYREL
Sbjct: 844 ILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVNIFPEKGSYREL 903
Query: 909 SEIAEQAKRRAEVAR 923
SEIAEQAKRRAE+AR
Sbjct: 904 SEIAEQAKRRAEIAR 918
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1572 bits (4071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 770/916 (84%), Positives = 840/916 (91%), Gaps = 4/916 (0%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFL 67
S +EIK E+VDLERIP+EEVFEQLKCS+EGL+SDEGA RL +FG NKLEEK E+K LKFL
Sbjct: 6 SWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFL 65
Query: 68 GFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAA 127
GFMWNPLSWVME+AAIMAI LANGGG+ PDWQDF+GI+VLL+INSTISFIEENNAGNAAA
Sbjct: 66 GFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAA 125
Query: 128 ALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
ALMANLAPKTKVLRDG+W EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALT
Sbjct: 126 ALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALT 185
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLP TK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT+
Sbjct: 186 GESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTS 245
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSI +G++ EI+IMYP+QHR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 246 IGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 305
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD++LIEVF K ++ + V+L+A
Sbjct: 306 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMA 365
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
ARASR ENQDAIDA+IVGML DPKEARAG+ EVHFLPFNPVDKRTA+TYID G+WHR+S
Sbjct: 366 ARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSS 425
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQI+ LCN + + ++K H VID FAERGLRSLGVA+Q +PEKTKES G+PW+ VGL
Sbjct: 426 KGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGL 485
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRAL LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS+SLLG K
Sbjct: 486 LPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSK 545
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607
D S+ +P+DELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKKADIG
Sbjct: 546 DESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 605
Query: 608 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML
Sbjct: 606 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 665
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
+ALIW+FDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVVLG+Y+A+
Sbjct: 666 VALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMAL 725
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 787
TV+FFWL TDFFS FGVRS++ +E+MAALYLQVSIISQALIFVTRSRSWSF+ER
Sbjct: 726 TTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFVER 785
Query: 788 PGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847
PG LL AFVIAQLVAT IAVYANW FARI GCGWGWAG IW+YS++TY PLDILKF IR
Sbjct: 786 PGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFIIR 845
Query: 848 YILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRE 907
Y L+GKAWD ++ KTAFTTKKDYGK EREAQWA AQRTLHGL PPE +F+D + E
Sbjct: 846 YALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPE--AMFNDNKN--E 901
Query: 908 LSEIAEQAKRRAEVAR 923
LSEIAEQAKRRAEVAR
Sbjct: 902 LSEIAEQAKRRAEVAR 917
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q42556|PMA9_ARATH ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1571 bits (4069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 770/923 (83%), Positives = 847/923 (91%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M G+K S ++IKNE +DLE+IPIEEV QL+C+REGLTSDEG RL +FGPNKLEEKKE
Sbjct: 1 MAGNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
+KVLKFLGFMWNPLSWVME AAIMAIALANGGGR PDWQDFVGI VLL+INSTISFIEEN
Sbjct: 61 NKVLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDG+WSEQ+A+ILVPGD+ISIKLGDIVPAD RLL+GDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTK+P EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ GH
Sbjct: 181 IDQSALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIA+G++ EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD++++EVF K ++K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
+ +++ AARASR ENQDAIDA IVGML DP+EAR G+ EVHF PFNPVDKRTA+TYID++
Sbjct: 361 DQLLVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDAN 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHR SKGAPEQI+ LCN RED K+ H +IDKFA+RGLRSL V RQ + EK K SPG
Sbjct: 421 GNWHRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGE 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ +GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKD SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQE KHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LK+ADIGIAVADATDAARSASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV+GFML+ALIWKFDFSPFMVLI+AILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVV
Sbjct: 661 IVMGFMLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG+YLA+MTVVFFW TDFFS FGVRS+ P E+ AA+YLQVSI+SQALIFVTRSR
Sbjct: 721 LGTYLAVMTVVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWS++ERPG L +AF +AQL+AT IAVYANW+FARI G GWGWAGVIWLYS+V Y PLD
Sbjct: 781 SWSYVERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFS 900
ILKF IRY LSG+AWD ++ENKTAFT+KKDYGK EREAQWA AQRTLHGLQP +T+ +F+
Sbjct: 841 ILKFIIRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFN 900
Query: 901 DKNSYRELSEIAEQAKRRAEVAR 923
DK++YRELSEIA+QAKRRAEVAR
Sbjct: 901 DKSTYRELSEIADQAKRRAEVAR 923
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20431|PMA3_ARATH ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 773/918 (84%), Positives = 842/918 (91%)
Query: 6 AISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLK 65
A LE+I NE+VDLE+IPIEEVF+QLKCSREGL+ EG +RL +FGPNKLEEKKESK+LK
Sbjct: 2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 61
Query: 66 FLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNA 125
FLGFMWNPLSWVMEAAAIMAIALANGGG+ PDWQDFVGI+ LLVINSTISF+EENNAGNA
Sbjct: 62 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNA 121
Query: 126 AAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA 185
AAALMA LAPKTKVLRDG+WSEQ+ASILVPGD++SIKLGDI+PADARLLEGDPLK+DQSA
Sbjct: 122 AAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSA 181
Query: 186 LTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 245
LTGESLP TK P +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL
Sbjct: 182 LTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 241
Query: 246 TAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305
TAIGNFCICSIAVGI EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 242 TAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 301
Query: 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVIL 365
SH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEV+ KGVEK+ V+L
Sbjct: 302 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLL 361
Query: 366 LAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHR 425
AARASR ENQDAIDAA+VGMLADPKEARAG+RE+HFLPFNPVDKRTALT+IDS+GNWHR
Sbjct: 362 FAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHR 421
Query: 426 ASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLV 485
SKGAPEQIL LCN R D+RK+VH+ IDK+AERGLRSL V+RQ +PEKTKES G+PW+ V
Sbjct: 422 VSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFV 481
Query: 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 545
G+LPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMG+NMYPSSSLLG+
Sbjct: 482 GVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGK 541
Query: 546 DKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605
KD ++A +PV++LIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKKAD
Sbjct: 542 HKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 601
Query: 606 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 665
IGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF
Sbjct: 602 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 661
Query: 666 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYL 725
MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y+
Sbjct: 662 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYM 721
Query: 726 AIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFI 785
AIMTVVFFW KTDFF F VR LR EMM+ALYLQVSI+SQALIFVTRSRSWSF
Sbjct: 722 AIMTVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSFT 781
Query: 786 ERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFG 845
ERPG L AF +AQL+AT IAVY NW FARI+G GWGWAGVIWLYS+V YFPLDI+KF
Sbjct: 782 ERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFA 841
Query: 846 IRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSY 905
IRYIL+G AW +++N+TAFTTK++YG EEREAQWA AQRTLHGLQ ET + ++ Y
Sbjct: 842 IRYILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPERGGY 901
Query: 906 RELSEIAEQAKRRAEVAR 923
RELSEIA QAKRRAE+AR
Sbjct: 902 RELSEIANQAKRRAEIAR 919
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SH76|PMA6_ARATH ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1566 bits (4056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 766/917 (83%), Positives = 844/917 (92%), Gaps = 3/917 (0%)
Query: 7 ISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKF 66
IS +EIK E+VDLE+IP++EVF+QLKCSREGL+S+EG +RL +FG NKLEEK E+K LKF
Sbjct: 5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKF 64
Query: 67 LGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAA 126
LGFMWNPLSWVMEAAAIMAI LANGGGR PDWQDFVGI LL+INSTISFIEENNAGNAA
Sbjct: 65 LGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAA 124
Query: 127 AALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 186
AALMANLAPKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSAL
Sbjct: 125 AALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 187 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 246
TGESLP TK+ DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT
Sbjct: 185 TGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306
AIGNFCICSI +G++ EIIIMYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 307 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILL 366
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF+K V+K++VILL
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILL 364
Query: 367 AARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRA 426
+ARASR ENQDAID +IV ML DPKEARAG+ EVHFLPFNPV+KRTA+TYID++G WHR
Sbjct: 365 SARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRC 424
Query: 427 SKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG 486
SKGAPEQI+ LC+ + + +++ H +IDKFAERGLRSLGVARQ +PEK KES G PW+ VG
Sbjct: 425 SKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVG 484
Query: 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
LLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL ++
Sbjct: 485 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-EN 543
Query: 547 KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606
KD + +PVDELIEKADGFAGVFPEHKYEIV++LQERKHI GMTGDGVNDAPALKKADI
Sbjct: 544 KDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADI 603
Query: 607 GIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 666
GIAV DATDAARSASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM
Sbjct: 604 GIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 663
Query: 667 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLA 726
L+ALIW+FDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG+Y+A
Sbjct: 664 LVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMA 723
Query: 727 IMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE 786
++TVVFFWL T FFSD FGVRSL+ + +E++A LYLQVSIISQALIFVTRSRSWSF+E
Sbjct: 724 LVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFVE 783
Query: 787 RPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGI 846
RPGLLL AF +AQL+AT IA YA+W FARI+GCGWGW GVIW+YS+VTY PLDILKF
Sbjct: 784 RPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFIT 843
Query: 847 RYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYR 906
RY LSGKAW+ ++EN+TAFTTKKDYG+ EREAQWA AQRTLHGL+PPE+ +F D +Y
Sbjct: 844 RYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPES--MFEDTATYT 901
Query: 907 ELSEIAEQAKRRAEVAR 923
ELSEIAEQAK+RAEVAR
Sbjct: 902 ELSEIAEQAKKRAEVAR 918
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 923 | ||||||
| 6759597 | 954 | plasma membrane H+ ATPase [Prunus persic | 1.0 | 0.967 | 0.924 | 0.0 | |
| 392055980 | 954 | plasma membrane H+-ATPase [Malus xiaojin | 1.0 | 0.967 | 0.919 | 0.0 | |
| 224121346 | 955 | autoinhibited H+ ATPase [Populus trichoc | 1.0 | 0.966 | 0.916 | 0.0 | |
| 449499538 | 955 | PREDICTED: LOW QUALITY PROTEIN: plasma m | 1.0 | 0.966 | 0.908 | 0.0 | |
| 356563778 | 951 | PREDICTED: ATPase 5, plasma membrane-typ | 0.996 | 0.967 | 0.916 | 0.0 | |
| 356552575 | 951 | PREDICTED: plasma membrane ATPase 4-like | 0.996 | 0.967 | 0.917 | 0.0 | |
| 225429772 | 954 | PREDICTED: plasma membrane ATPase 4 isof | 1.0 | 0.967 | 0.914 | 0.0 | |
| 224142101 | 954 | predicted protein [Populus trichocarpa] | 1.0 | 0.967 | 0.911 | 0.0 | |
| 225446002 | 954 | PREDICTED: plasma membrane ATPase 4 isof | 1.0 | 0.967 | 0.893 | 0.0 | |
| 147800127 | 954 | hypothetical protein VITISV_014422 [Viti | 1.0 | 0.967 | 0.893 | 0.0 |
| >gi|6759597|emb|CAB69823.1| plasma membrane H+ ATPase [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 1730 bits (4480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 853/923 (92%), Positives = 894/923 (96%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGGDKAISLEEIKNESVDLERIPIEEVFEQLKC+REGLT DEGA+RL VFGPNKLEEKKE
Sbjct: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCTREGLTGDEGANRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAIALANGGGR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKLLKFLGFMWNPLSWVMEAAAVMAIALANGGGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRW+EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWTEQEASILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI+ E+I+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGILIELIVMYPIQKRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEAR G+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARVGIREVHFLPFNPVDKRTALTYIDSD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQILALCNC+ED +K+VHAVIDKFAERGLRSL VARQ++PEKTKESPG
Sbjct: 421 GNWHRASKGAPEQILALCNCKEDFKKRVHAVIDKFAERGLRSLAVARQQVPEKTKESPGT 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDASIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GFM IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATG+V
Sbjct: 661 IVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGIV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG Y+A+MTVVFFWLM+ T FFS+ F VR L RP++MMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYMALMTVVFFWLMKDTKFFSNTFNVRHLGDRPEQMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPGLLL AF++AQLVAT IAVYANW+FARIEGCGWGWAGVIWL+S+VTYFPLD
Sbjct: 781 SWSFVERPGLLLLGAFMVAQLVATLIAVYANWAFARIEGCGWGWAGVIWLFSVVTYFPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFS 900
+LKF IRYILSGKAWD LLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETN +FS
Sbjct: 841 LLKFAIRYILSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNNLFS 900
Query: 901 DKNSYRELSEIAEQAKRRAEVAR 923
+KNSYRELSEIAEQAKRRAEVAR
Sbjct: 901 EKNSYRELSEIAEQAKRRAEVAR 923
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|392055980|gb|AFM52333.1| plasma membrane H+-ATPase [Malus xiaojinensis] | Back alignment and taxonomy information |
|---|
Score = 1719 bits (4453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/923 (91%), Positives = 890/923 (96%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M GDKAISLEEIKNESVDLERIP+EEVFEQLKC+REGLT +EGA+RL VFGPNKLEEKKE
Sbjct: 1 MAGDKAISLEEIKNESVDLERIPVEEVFEQLKCTREGLTGEEGANRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAIALANGGGR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKLLKFLGFMWNPLSWVMEAAALMAIALANGGGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRW+EQDASILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWTEQDASILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDNTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI+ EII+MYP+Q RKYR GIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGILIEIIVMYPIQKRKYRQGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+ED +KKVH VIDKFAERGLRSLGVARQ++PEKTKESPG
Sbjct: 421 GNWHRASKGAPEQILTLCNCKEDFKKKVHGVIDKFAERGLRSLGVARQQVPEKTKESPGT 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQ+KDA+IA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 ALLGQNKDAAIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GFMLIALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATG+V
Sbjct: 661 IVFGFMLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGIV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTVVFFWLM TDFFS+ F VRSLR RP++MMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYLALMTVVFFWLMNDTDFFSEKFHVRSLRDRPEQMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPGLLL AF+IAQLVAT IAVYANW FARI+G GWGWAGVIWLYS+VTY PLD
Sbjct: 781 SWSFVERPGLLLLGAFMIAQLVATLIAVYANWGFARIKGAGWGWAGVIWLYSIVTYVPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFS 900
LKF IRYI SGKAW+ LLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPET+ +F+
Sbjct: 841 FLKFAIRYIQSGKAWNNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNLFN 900
Query: 901 DKNSYRELSEIAEQAKRRAEVAR 923
++NSYRELSEIAEQAKRRAEVAR
Sbjct: 901 ERNSYRELSEIAEQAKRRAEVAR 923
|
Source: Malus xiaojinensis Species: Malus xiaojinensis Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121346|ref|XP_002330804.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222872606|gb|EEF09737.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1712 bits (4433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/924 (91%), Positives = 889/924 (96%), Gaps = 1/924 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M ISLEEIKNESVDLERIP+EEVFEQLKC+REGL++DEGA RL VFGPNKLEEKKE
Sbjct: 1 MSSKGGISLEEIKNESVDLERIPMEEVFEQLKCTREGLSADEGASRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAIALANG GR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKILKFLGFMWNPLSWVMEAAALMAIALANGDGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDASILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDASILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI+AE+I+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGIIAELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD +LIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDTSLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+EDV+KKVH+VIDKFAERGLRSLGVA+QE+PEK+K++ GA
Sbjct: 421 GNWHRASKGAPEQILTLCNCKEDVKKKVHSVIDKFAERGLRSLGVAKQEVPEKSKDAAGA 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQLVGLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQLVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GFM IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIF+TG+V
Sbjct: 661 IVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFSTGIV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG Y+A+MTV+FFW+M+ TDFFSD FGVRSLR +EMMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYMALMTVLFFWIMKDTDFFSDKFGVRSLRNNDEEMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPG LL AFV AQLVAT IAVYANW FARIEGCGWGWAGVIWL+S+VTY PLD
Sbjct: 781 SWSFVERPGFLLLGAFVAAQLVATLIAVYANWGFARIEGCGWGWAGVIWLFSVVTYVPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPET-NGIF 899
ILKF IRYILSGKAWD LLENKTAFTTKKDYGKEEREAQWA AQRTLHGLQPPET + +F
Sbjct: 841 ILKFAIRYILSGKAWDNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQPPETSHNMF 900
Query: 900 SDKNSYRELSEIAEQAKRRAEVAR 923
S+KNSYRELSEIAEQAKRRAE+AR
Sbjct: 901 SEKNSYRELSEIAEQAKRRAEMAR 924
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449499538|ref|XP_004160843.1| PREDICTED: LOW QUALITY PROTEIN: plasma membrane ATPase 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1706 bits (4418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 839/924 (90%), Positives = 881/924 (95%), Gaps = 1/924 (0%)
Query: 1 MGGD-KAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK 59
MGGD KAI+LEEIKNE+VDLE IPIEEVFEQLKC+REGLTS+EGAHRL VFGPNKLEEKK
Sbjct: 1 MGGDHKAITLEEIKNEAVDLEHIPIEEVFEQLKCTREGLTSEEGAHRLQVFGPNKLEEKK 60
Query: 60 ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEE 119
ESK+LKFLGFMWNPLSWVMEAAA+MAI LANGGGR PDWQDFVGII LL INSTISFIEE
Sbjct: 61 ESKLLKFLGFMWNPLSWVMEAAALMAIVLANGGGRPPDWQDFVGIIALLFINSTISFIEE 120
Query: 120 NNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 179
NNAGNAAAALMA LAPKTKVLRDGRWSEQ+A+ILVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 121 NNAGNAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPL 180
Query: 180 KIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG 239
KIDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG
Sbjct: 181 KIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG 240
Query: 240 HFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLS 299
HFQKVLTAIGNFCICSIAVGI+ E+I+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLS
Sbjct: 241 HFQKVLTAIGNFCICSIAVGILIELIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLS 300
Query: 300 VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE 359
VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDR+LIEVF KGVE
Sbjct: 301 VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRSLIEVFVKGVE 360
Query: 360 KEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDS 419
KE+VILLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDS
Sbjct: 361 KEYVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDS 420
Query: 420 DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPG 479
+G WHR SKGAPEQIL LCN REDVR+KVHAVIDKFAERGLRSLGVARQE+ EK K+SPG
Sbjct: 421 NGTWHRVSKGAPEQILNLCNSREDVRRKVHAVIDKFAERGLRSLGVARQEVHEKXKDSPG 480
Query: 480 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 539
PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS
Sbjct: 481 GPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS 540
Query: 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 599
SSLLGQDKD SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP
Sbjct: 541 SSLLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 600
Query: 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659
ALKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI
Sbjct: 601 ALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 660
Query: 660 RIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGV 719
RIV GFM IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIF TG+
Sbjct: 661 RIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFGTGI 720
Query: 720 VLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRS 779
VLG YLA+MTV+FFW ++ T+FFS+ F V+SL+ P+E+MAALYLQVSIISQALIFVTRS
Sbjct: 721 VLGGYLALMTVLFFWAVKDTNFFSEKFNVKSLKDSPEELMAALYLQVSIISQALIFVTRS 780
Query: 780 RSWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPL 839
RSWS++ERPGLLL AF+IAQLVAT IAVYANW FARI+G GWGWAGVIWLYSLVTY PL
Sbjct: 781 RSWSYMERPGLLLVGAFIIAQLVATVIAVYANWGFARIKGMGWGWAGVIWLYSLVTYIPL 840
Query: 840 DILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIF 899
DILKFGIRY SGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPE + +F
Sbjct: 841 DILKFGIRYAHSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPENSNLF 900
Query: 900 SDKNSYRELSEIAEQAKRRAEVAR 923
+K+SYRELSEIAEQAKRRAEVAR
Sbjct: 901 PEKSSYRELSEIAEQAKRRAEVAR 924
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563778|ref|XP_003550136.1| PREDICTED: ATPase 5, plasma membrane-type-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1702 bits (4407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 846/923 (91%), Positives = 887/923 (96%), Gaps = 3/923 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG ISLEEIKNE+VDLERIPIEEVFEQLKCSR GLTS+EG +RL VFGPNKLEEKKE
Sbjct: 1 MGG---ISLEEIKNENVDLERIPIEEVFEQLKCSRAGLTSEEGGNRLQVFGPNKLEEKKE 57
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAAIMAIALANGGGR PDWQDFVGII LLVINSTISFIEEN
Sbjct: 58 SKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLVINSTISFIEEN 117
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRD RWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 118 NAGNAAAALMAGLAPKTKVLRDNRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLS 177
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGST K+GEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 178 VDQSALTGESLPVTKSPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 237
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGIV E+I+MYP+QHR+YRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 238 FQKVLTAIGNFCICSIAVGIVIELIVMYPIQHRRYRDGIDNLLVLLIGGIPIAMPTVLSV 297
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 298 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 357
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
E+VILLAARASRTENQDAIDAAIVGMLADPKEAR+G+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 358 EYVILLAARASRTENQDAIDAAIVGMLADPKEARSGIREVHFLPFNPVDKRTALTYIDSD 417
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQI+ LCNC+EDVR+KVHAVIDKFAERGLRSLGVARQE+PEK+K+SPG
Sbjct: 418 GNWHRASKGAPEQIITLCNCKEDVRRKVHAVIDKFAERGLRSLGVARQEVPEKSKDSPGG 477
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 478 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 537
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASI+ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 538 ALLGQDKDASISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 597
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 598 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 657
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV
Sbjct: 658 IVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVV 717
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LGSY+A+MTVVFFW M+ T+FFS+ FGVR L PD+MMAALYLQVSIISQALIFVTRSR
Sbjct: 718 LGSYMALMTVVFFWAMKDTNFFSNKFGVRPLSDSPDKMMAALYLQVSIISQALIFVTRSR 777
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPGLLL AF IAQLVATFIAVYANWSFARI+G GWGWAGVIWLYS+VTY PLD
Sbjct: 778 SWSFVERPGLLLLGAFFIAQLVATFIAVYANWSFARIKGMGWGWAGVIWLYSVVTYIPLD 837
Query: 841 ILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFS 900
+LKF IRYILSGKAWD LLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPET+ +F+
Sbjct: 838 LLKFAIRYILSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNLFN 897
Query: 901 DKNSYRELSEIAEQAKRRAEVAR 923
DKNSYRELSEIAEQAKRRAEVAR
Sbjct: 898 DKNSYRELSEIAEQAKRRAEVAR 920
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552575|ref|XP_003544641.1| PREDICTED: plasma membrane ATPase 4-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1701 bits (4406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/923 (91%), Positives = 887/923 (96%), Gaps = 3/923 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG ISLEEIKNE+VDLERIPIEEVFEQLKCSR GLTS+EGA+RL VFGPNKLEEKKE
Sbjct: 1 MGG---ISLEEIKNENVDLERIPIEEVFEQLKCSRAGLTSEEGANRLQVFGPNKLEEKKE 57
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAAIMAIALANGGGR PDWQDFVGII LLVINSTISFIEEN
Sbjct: 58 SKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLVINSTISFIEEN 117
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRD RWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 118 NAGNAAAALMAGLAPKTKVLRDNRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLS 177
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGST K+GEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 178 VDQSALTGESLPVTKSPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 237
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI E+I+MYP+QHR+YR+GIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 238 FQKVLTAIGNFCICSIAVGIAIELIVMYPIQHRRYREGIDNLLVLLIGGIPIAMPTVLSV 297
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 298 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 357
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
E+VILLAARASRTENQDAIDAAIVGMLADPKEAR+GVREVHFLPFNPVDKRTALTYIDSD
Sbjct: 358 EYVILLAARASRTENQDAIDAAIVGMLADPKEARSGVREVHFLPFNPVDKRTALTYIDSD 417
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQI+ LCNC+EDVR+KVHAVIDKFAERGLRSLGVARQE+PEK+K+SPG
Sbjct: 418 GNWHRASKGAPEQIITLCNCKEDVRRKVHAVIDKFAERGLRSLGVARQEVPEKSKDSPGG 477
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 478 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 537
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASI+ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 538 ALLGQDKDASISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 597
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 598 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 657
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV
Sbjct: 658 IVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVV 717
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LGSY+A+MTVVFFW M+ T+FFS+ FGVR LR PDEMMAALYLQVSIISQALIFVTRSR
Sbjct: 718 LGSYMALMTVVFFWAMKDTNFFSNKFGVRPLRDSPDEMMAALYLQVSIISQALIFVTRSR 777
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPGLLL AF IAQLVATFIAVYANW FARI+G GWGWAGVIWLYS+VTY PLD
Sbjct: 778 SWSFVERPGLLLLGAFFIAQLVATFIAVYANWGFARIKGMGWGWAGVIWLYSVVTYIPLD 837
Query: 841 ILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFS 900
+LKF IRYILSGKAWD LLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPET+ +F+
Sbjct: 838 LLKFAIRYILSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNLFN 897
Query: 901 DKNSYRELSEIAEQAKRRAEVAR 923
DKNSYRELSEIAEQAKRRAEVAR
Sbjct: 898 DKNSYRELSEIAEQAKRRAEVAR 920
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429772|ref|XP_002282619.1| PREDICTED: plasma membrane ATPase 4 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1701 bits (4404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 844/923 (91%), Positives = 881/923 (95%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M DK+I LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGA RL +FGPNKLEEKKE
Sbjct: 1 MAADKSIGLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGASRLQIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGG+ PDWQDFVGIIVLL+INSTISFIEEN
Sbjct: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGQPPDWQDFVGIIVLLLINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRW+EQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWTEQDAAILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEI+AVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIDAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVG++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF KGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFTKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHVILLAARASR ENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 361 EHVILLAARASRIENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
G WHRASKGAPEQIL LCNC+EDVRKKVH VIDKFAERGLRSL VARQE+PEKTK++PGA
Sbjct: 421 GTWHRASKGAPEQILNLCNCKEDVRKKVHGVIDKFAERGLRSLAVARQEVPEKTKDAPGA 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLL LFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSS
Sbjct: 481 PWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATG+V
Sbjct: 661 IVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGIV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTVVFFW+M+ TDFF + FGV+S+R EMMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYLALMTVVFFWVMKDTDFFPEKFGVKSIRYSEHEMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWS++ERPGLLL AF+ AQLVAT I+VYANW FARI+G GWGWAGVIWLYS+VTY PLD
Sbjct: 781 SWSYVERPGLLLVGAFIAAQLVATVISVYANWGFARIKGTGWGWAGVIWLYSVVTYVPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFS 900
LKF IRYI SGKAWD LLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPET+ IFS
Sbjct: 841 FLKFAIRYIQSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNIFS 900
Query: 901 DKNSYRELSEIAEQAKRRAEVAR 923
DK+ YRELSEIAEQAKRRAEVAR
Sbjct: 901 DKSGYRELSEIAEQAKRRAEVAR 923
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224142101|ref|XP_002324397.1| predicted protein [Populus trichocarpa] gi|222865831|gb|EEF02962.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1700 bits (4402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 841/923 (91%), Positives = 885/923 (95%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M ISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGA RL VFGPNKLEEKKE
Sbjct: 1 MSSKGGISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGATRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAI LANG GR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKILKFLGFMWNPLSWVMEAAALMAIVLANGDGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIA+GI+ EI++MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAIGIIIEIVVMYPIQKRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD++LIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID++
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNN 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+EDV++KVH+VIDKFAERGLRSLGVA+QE+PEK+K++PGA
Sbjct: 421 GNWHRASKGAPEQILTLCNCKEDVKRKVHSVIDKFAERGLRSLGVAKQEVPEKSKDAPGA 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQLVGLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSS
Sbjct: 481 PWQLVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDA+IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDAAIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GFM IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIF+TGVV
Sbjct: 661 IVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFSTGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTV+FFW+M+ TDFFSD FGVRSLR EMMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYLALMTVLFFWIMKDTDFFSDKFGVRSLRDSKYEMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPGLLL +AFV+AQL+AT IAVYANW FA I+GCGWGWAGVIWL+SLVTY PLD
Sbjct: 781 SWSFVERPGLLLVSAFVVAQLIATLIAVYANWGFAHIKGCGWGWAGVIWLFSLVTYLPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFS 900
+LKF IRYILSGKAWD LENKTAFTTKKDYGKEEREAQWA AQRTLHGLQP +TN IFS
Sbjct: 841 VLKFAIRYILSGKAWDNFLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQPAQTNTIFS 900
Query: 901 DKNSYRELSEIAEQAKRRAEVAR 923
DK+SYRELSEIAEQAKRRAE+AR
Sbjct: 901 DKSSYRELSEIAEQAKRRAEMAR 923
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446002|ref|XP_002267501.1| PREDICTED: plasma membrane ATPase 4 isoform 1 [Vitis vinifera] gi|297735422|emb|CBI17862.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1698 bits (4397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 825/923 (89%), Positives = 879/923 (95%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGGDK+ISLEEIKNE+VDLE+IPIEEVFEQLKC++EGLTS EG RL +FGPNKLEEKKE
Sbjct: 1 MGGDKSISLEEIKNETVDLEKIPIEEVFEQLKCTKEGLTSQEGEARLQIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAA+MAI LANG G+ PDWQDFVGI+ LLVINSTISFIEEN
Sbjct: 61 SKFLKFLGFMWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 VDQSALTGESLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVG++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNL+EVFAKGV+K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 361 EHVLLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
G WHRASKGAPEQIL LC C+EDV+KK H++IDKFAERGLRSL V RQE+PEK+KES G+
Sbjct: 421 GKWHRASKGAPEQILDLCKCKEDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKESLGS 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSA 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDASIAALPV+ELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV
Sbjct: 661 IVFGFLFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTV+FFW+M+ TDFF D FGV+S+R P EMMAALYLQVS++SQALIFVTRSR
Sbjct: 721 LGGYLALMTVIFFWVMKDTDFFPDKFGVKSIRDSPHEMMAALYLQVSVVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPGLLL TAF+IAQLVAT IAVYANW FARI+G GWGWAGV+W+YS+V Y PLD
Sbjct: 781 SWSFVERPGLLLVTAFIIAQLVATLIAVYANWGFARIKGMGWGWAGVVWIYSVVFYVPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFS 900
+KF IRYILSGKAW LLENKTAFTTKKDYGKEEREAQWA AQRTLHGLQPPET+ +F+
Sbjct: 841 FIKFFIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSNLFN 900
Query: 901 DKNSYRELSEIAEQAKRRAEVAR 923
DKNSYRELSEIAEQAKRRAEVAR
Sbjct: 901 DKNSYRELSEIAEQAKRRAEVAR 923
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147800127|emb|CAN64375.1| hypothetical protein VITISV_014422 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1697 bits (4396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 825/923 (89%), Positives = 878/923 (95%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGGDK+ISLEEIKNE+VDLE+IPIEEVFEQLKC++EGLTS EG RL +FGPNKLEEKKE
Sbjct: 1 MGGDKSISLEEIKNETVDLEKIPIEEVFEQLKCTKEGLTSQEGEARLQIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAA+MAI LANG G+ PDWQDFVGI+ LLVINSTISFIEEN
Sbjct: 61 SKFLKFLGFMWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 VDQSALTGESLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVG++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNL+EVFAKGV+K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 361 EHVLLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
G WHRASKGAPEQIL LC C+EDV+KK H++IDKFAERGLRSL V RQE+PEK+KES G+
Sbjct: 421 GKWHRASKGAPEQILDLCKCKEDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKESLGS 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSA 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDASIAALPV+ELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV
Sbjct: 661 IVFGFLFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTV+FFW+M+ TDFF D FGV+S+R P EMMAALYLQVS++SQALIFVTRSR
Sbjct: 721 LGGYLALMTVIFFWVMKDTDFFPDKFGVKSIRDSPHEMMAALYLQVSVVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPGLLL TAF+IAQLVAT IAVYANW FARI+G GWGWAGV+W+YS+V Y PLD
Sbjct: 781 SWSFVERPGLLLVTAFIIAQLVATLIAVYANWGFARIKGMGWGWAGVVWIYSVVFYVPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFS 900
+KF IRYILSGKAW LLENKTAFTTKKDYGKEEREAQWA AQRTLHGLQPPET+ +F
Sbjct: 841 FIKFFIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSNLFX 900
Query: 901 DKNSYRELSEIAEQAKRRAEVAR 923
DKNSYRELSEIAEQAKRRAEVAR
Sbjct: 901 DKNSYRELSEIAEQAKRRAEVAR 923
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 923 | ||||||
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.991 | 0.964 | 0.801 | 0.0 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.991 | 0.964 | 0.791 | 0.0 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 1.0 | 0.967 | 0.762 | 0.0 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.994 | 0.967 | 0.769 | 0.0 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.988 | 0.962 | 0.770 | 0.0 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.990 | 0.963 | 0.765 | 0.0 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.996 | 0.962 | 0.753 | 0.0 | |
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.990 | 0.952 | 0.747 | 0.0 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.986 | 0.947 | 0.665 | 0.0 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.979 | 0.954 | 0.676 | 0.0 |
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3814 (1347.7 bits), Expect = 0., P = 0.
Identities = 733/915 (80%), Positives = 793/915 (86%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXG 68
L+ IKNESVDL RIP+EEVFE+LKC+++GLT++E +HRL VFGPN G
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 69 FMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXX 128
FMWNPLSWVME NGGGR PDWQDFVGI+ LL+INSTISFIEE
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 129 XXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
PKTKVLRD +WSEQ+ASILVPGDVISIKLGDI+PADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ES+PVTKNP DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI+ E+++MYP+Q R+YRDGIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVD+NL+EVFAKGV KEHV LLAA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
RASR ENQDAIDAAIVGMLADPKEARAGVREVHF PFNPVDKRTALTY+DSDGNWHRASK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL LCNC+EDVR+KVH VIDKFAERGLRSL VARQE+ EK K++PG PWQLVGLL
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXX 608
+S+ ALPVDELIEKADGFAGVFPEHKYEIV RLQ+R HICGMTGDGVNDAPALKK
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 609 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM I
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDFSPFMVLIIAILNDGTIMTISKDR+KPSPQPDSWKL++IF+TGVVLG Y A+M
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERP 788
TVVFFW+M+ +DFFS+ FGVR L RP++MMAALYLQVSIISQALIFVTRSRSWS+ E P
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECP 783
Query: 789 GLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 848
GLLL AFVIAQLVATFIAVYANWSFARIEG GWGWAGVIWLYS +TY PLD+LKFGIRY
Sbjct: 784 GLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRY 843
Query: 849 ILSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSYREL 908
+LSGKAW LLENKTAFTTKKDYGK TLHGLQP E N IF++KNSY EL
Sbjct: 844 VLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSEL 903
Query: 909 SEIAEQAKRRAEVAR 923
S+IAEQAKRRAEV R
Sbjct: 904 SQIAEQAKRRAEVVR 918
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3756 (1327.2 bits), Expect = 0., P = 0.
Identities = 724/915 (79%), Positives = 785/915 (85%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXG 68
LE+IKNE+VDLE+IPIEEVF+QLKC+REGLT+ EG R+ +FGPN G
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 69 FMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXX 128
FMWNPLSWVME NG R PDWQDFVGII LLVINSTISFIEE
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 129 XXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
PKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI EI++MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSDGNWHR SK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL L N R D+RKKV + IDK+AERGLRSL VARQ +PEKTKESPG PW+ VGLL
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS++LLG DKD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXX 608
++IA++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKK
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 609 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFMLI
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATG+VLG Y AIM
Sbjct: 664 ALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIM 723
Query: 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERP 788
+V+FFW KTDFFSD FGVRS+R DE+M A+YLQVSIISQALIFVTRSRSWSF+ERP
Sbjct: 724 SVIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERP 783
Query: 789 GLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 848
G LL AFVIAQLVAT IAVYA+W+FA+++G GWGWAGVIW+YS+VTYFP DILKF IRY
Sbjct: 784 GALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRY 843
Query: 849 ILSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSYREL 908
ILSGKAW +L +N+TAFTTKKDYG TLHGLQP E IF +K SYREL
Sbjct: 844 ILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVNIFPEKGSYREL 903
Query: 909 SEIAEQAKRRAEVAR 923
SEIAEQAKRRAE+AR
Sbjct: 904 SEIAEQAKRRAEIAR 918
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3692 (1304.7 bits), Expect = 0., P = 0.
Identities = 704/923 (76%), Positives = 780/923 (84%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXX 60
M G+K S ++IKNE +DLE+IPIEEV QL+C+REGLTSDEG RL +FGPN
Sbjct: 1 MAGNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKE 60
Query: 61 XXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEX 120
GFMWNPLSWVME NGGGR PDWQDFVGI VLL+INSTISFIEE
Sbjct: 61 NKVLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEEN 120
Query: 121 XXXXXXXXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
PKTKVLRDG+WSEQ+A+ILVPGD+ISIKLGDIVPAD RLL+GDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTK+P EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ GH
Sbjct: 181 IDQSALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIA+G++ EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD++++EVF K ++K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
+ +++ AARASR ENQDAIDA IVGML DP+EAR G+ EVHF PFNPVDKRTA+TYID++
Sbjct: 361 DQLLVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDAN 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHR SKGAPEQI+ LCN RED K+ H +IDKFA+RGLRSL V RQ + EK K SPG
Sbjct: 421 GNWHRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGE 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ +GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKD SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQE KHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPA 600
Query: 601 LKKXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LK+ VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV+GFML+ALIWKFDFSPFMVLI+AILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVV
Sbjct: 661 IVMGFMLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG+YLA+MTVVFFW TDFFS FGVRS+ P E+ AA+YLQVSI+SQALIFVTRSR
Sbjct: 721 LGTYLAVMTVVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWS++ERPG L +AF +AQL+AT IAVYANW+FARI G GWGWAGVIWLYS+V Y PLD
Sbjct: 781 SWSYVERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFS 900
ILKF IRY LSG+AWD ++ENKTAFT+KKDYGK TLHGLQP +T+ +F+
Sbjct: 841 ILKFIIRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFN 900
Query: 901 DKNSYRELSEIAEQAKRRAEVAR 923
DK++YRELSEIA+QAKRRAEVAR
Sbjct: 901 DKSTYRELSEIADQAKRRAEVAR 923
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3674 (1298.4 bits), Expect = 0., P = 0.
Identities = 706/918 (76%), Positives = 774/918 (84%)
Query: 6 AISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXX 65
A LE+I NE+VDLE+IPIEEVF+QLKCSREGL+ EG +RL +FGPN
Sbjct: 2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 61
Query: 66 XXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXX 125
GFMWNPLSWVME NGGG+ PDWQDFVGI+ LLVINSTISF+EE
Sbjct: 62 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNA 121
Query: 126 XXXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA 185
PKTKVLRDG+WSEQ+ASILVPGD++SIKLGDI+PADARLLEGDPLK+DQSA
Sbjct: 122 AAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSA 181
Query: 186 LTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 245
LTGESLP TK P +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL
Sbjct: 182 LTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 241
Query: 246 TAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305
TAIGNFCICSIAVGI EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 242 TAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 301
Query: 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVIL 365
SH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEV+ KGVEK+ V+L
Sbjct: 302 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLL 361
Query: 366 LAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHR 425
AARASR ENQDAIDAA+VGMLADPKEARAG+RE+HFLPFNPVDKRTALT+IDS+GNWHR
Sbjct: 362 FAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHR 421
Query: 426 ASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLV 485
SKGAPEQIL LCN R D+RK+VH+ IDK+AERGLRSL V+RQ +PEKTKES G+PW+ V
Sbjct: 422 VSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFV 481
Query: 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 545
G+LPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMG+NMYPSSSLLG+
Sbjct: 482 GVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGK 541
Query: 546 DKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXX 605
KD ++A +PV++LIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKK
Sbjct: 542 HKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 601
Query: 606 XXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 665
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF
Sbjct: 602 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 661
Query: 666 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYL 725
MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y+
Sbjct: 662 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYM 721
Query: 726 AIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFI 785
AIMTVVFFW KTDFF F VR LR EMM+ALYLQVSI+SQALIFVTRSRSWSF
Sbjct: 722 AIMTVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSFT 781
Query: 786 ERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFG 845
ERPG L AF +AQL+AT IAVY NW FARI+G GWGWAGVIWLYS+V YFPLDI+KF
Sbjct: 782 ERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFA 841
Query: 846 IRYILSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSY 905
IRYIL+G AW +++N+TAFTTK++YG TLHGLQ ET + ++ Y
Sbjct: 842 IRYILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPERGGY 901
Query: 906 RELSEIAEQAKRRAEVAR 923
RELSEIA QAKRRAE+AR
Sbjct: 902 RELSEIANQAKRRAEIAR 919
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3663 (1294.5 bits), Expect = 0., P = 0.
Identities = 706/916 (77%), Positives = 774/916 (84%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXX 67
S +EIK E+VDLERIP+EEVFEQLKCS+EGL+SDEGA RL +FG N
Sbjct: 6 SWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFL 65
Query: 68 GFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXX 127
GFMWNPLSWVME NGGG+ PDWQDF+GI+VLL+INSTISFIEE
Sbjct: 66 GFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAA 125
Query: 128 XXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
PKTKVLRDG+W EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALT
Sbjct: 126 ALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALT 185
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLP TK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT+
Sbjct: 186 GESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTS 245
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSI +G++ EI+IMYP+QHR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 246 IGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 305
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD++LIEVF K ++ + V+L+A
Sbjct: 306 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMA 365
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
ARASR ENQDAIDA+IVGML DPKEARAG+ EVHFLPFNPVDKRTA+TYID G+WHR+S
Sbjct: 366 ARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSS 425
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQI+ LCN + + ++K H VID FAERGLRSLGVA+Q +PEKTKES G+PW+ VGL
Sbjct: 426 KGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGL 485
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRAL LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS+SLLG K
Sbjct: 486 LPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSK 545
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXX 607
D S+ +P+DELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKK
Sbjct: 546 DESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 605
Query: 608 XXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML
Sbjct: 606 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 665
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
+ALIW+FDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVVLG+Y+A+
Sbjct: 666 VALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMAL 725
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 787
TV+FFWL TDFFS FGVRS++ +E+MAALYLQVSIISQALIFVTRSRSWSF+ER
Sbjct: 726 TTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFVER 785
Query: 788 PGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847
PG LL AFVIAQLVAT IAVYANW FARI GCGWGWAG IW+YS++TY PLDILKF IR
Sbjct: 786 PGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFIIR 845
Query: 848 YILSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSYRE 907
Y L+GKAWD ++ KTAFTTKKDYGK TLHGL PPE +F+D + E
Sbjct: 846 YALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEA--MFNDNKN--E 901
Query: 908 LSEIAEQAKRRAEVAR 923
LSEIAEQAKRRAEVAR
Sbjct: 902 LSEIAEQAKRRAEVAR 917
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3652 (1290.6 bits), Expect = 0., P = 0.
Identities = 702/917 (76%), Positives = 779/917 (84%)
Query: 7 ISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXX 66
IS +EIK E+VDLE+IP++EVF+QLKCSREGL+S+EG +RL +FG N
Sbjct: 5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKF 64
Query: 67 XGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXX 126
GFMWNPLSWVME NGGGR PDWQDFVGI LL+INSTISFIEE
Sbjct: 65 LGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAA 124
Query: 127 XXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 186
PKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSAL
Sbjct: 125 AALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 187 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 246
TGESLP TK+ DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT
Sbjct: 185 TGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306
AIGNFCICSI +G++ EIIIMYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 307 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILL 366
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF+K V+K++VILL
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILL 364
Query: 367 AARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRA 426
+ARASR ENQDAID +IV ML DPKEARAG+ EVHFLPFNPV+KRTA+TYID++G WHR
Sbjct: 365 SARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRC 424
Query: 427 SKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG 486
SKGAPEQI+ LC+ + + +++ H +IDKFAERGLRSLGVARQ +PEK KES G PW+ VG
Sbjct: 425 SKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVG 484
Query: 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
LLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL ++
Sbjct: 485 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-EN 543
Query: 547 KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXX 606
KD + +PVDELIEKADGFAGVFPEHKYEIV++LQERKHI GMTGDGVNDAPALKK
Sbjct: 544 KDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADI 603
Query: 607 XXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 666
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM
Sbjct: 604 GIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 663
Query: 667 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLA 726
L+ALIW+FDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG+Y+A
Sbjct: 664 LVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMA 723
Query: 727 IMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE 786
++TVVFFWL T FFSD FGVRSL+ + +E++A LYLQVSIISQALIFVTRSRSWSF+E
Sbjct: 724 LVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFVE 783
Query: 787 RPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGI 846
RPGLLL AF +AQL+AT IA YA+W FARI+GCGWGW GVIW+YS+VTY PLDILKF
Sbjct: 784 RPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFIT 843
Query: 847 RYILSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSYR 906
RY LSGKAW+ ++EN+TAFTTKKDYG+ TLHGL+PPE+ +F D +Y
Sbjct: 844 RYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPES--MFEDTATYT 901
Query: 907 ELSEIAEQAKRRAEVAR 923
ELSEIAEQAK+RAEVAR
Sbjct: 902 ELSEIAEQAKKRAEVAR 918
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3585 (1267.0 bits), Expect = 0., P = 0.
Identities = 697/925 (75%), Positives = 767/925 (82%)
Query: 3 GDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXX 62
GDK LE + E+VDLE +PIEEVFE L+CSREGLT++ RL +FG N
Sbjct: 2 GDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKESK 61
Query: 63 XXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXX 122
GFMWNPLSWVME NGGG+ PDWQDFVGII LLVINSTISFIEE
Sbjct: 62 FLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNA 121
Query: 123 XXXXXXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKID 182
PK KVLRDGRW EQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLKID
Sbjct: 122 GNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKID 181
Query: 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 242
QS+LTGESLPVTK P D V+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TN VGHFQ
Sbjct: 182 QSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHFQ 241
Query: 243 KVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302
+VLTAIGNFCICSIAVG++ EI++MYP+QHR YR GIDNLLVLLIGGIPIAMPTVLSVTM
Sbjct: 242 QVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301
Query: 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEH 362
AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF KGV+ +
Sbjct: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADT 361
Query: 363 VILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGN 422
V+L+AA+ASR ENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP DKRTALTYIDSDG
Sbjct: 362 VVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGK 421
Query: 423 WHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPW 482
HR SKGAPEQIL L + R ++ ++VHAVIDKFAERGLRSL VA QE+PE TKES G PW
Sbjct: 422 MHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPW 481
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
Q +GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+L
Sbjct: 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 541
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
LGQ KD SI ALP+D+LIEKADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALK
Sbjct: 542 LGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
Query: 603 KXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
K VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
Query: 663 LGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLG 722
LGFML+ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV G
Sbjct: 662 LGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFG 721
Query: 723 SYLAIMTVVFFWLMRKTDFFSDAFGVRSL-RTRPDE---MMAALYLQVSIISQALIFVTR 778
SY+A+MTV+FFW KTDFF FGV +L +T D+ + +A+YLQVSIISQALIFVTR
Sbjct: 722 SYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVTR 781
Query: 779 SRSWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFP 838
SRSWS++ERPG+LL AF++AQLVAT IAVYANWSFA IEG GWGWAGVIWLY++V Y P
Sbjct: 782 SRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIP 841
Query: 839 LDILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGI 898
LDI+KF IRY LSG+AWD ++E + AFT +KD+GK TLHGLQ P+ +
Sbjct: 842 LDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAK-M 900
Query: 899 FSDKNSYRELSEIAEQAKRRAEVAR 923
F ++ + ELS++AE+AKRRAE+AR
Sbjct: 901 FPERTHFNELSQMAEEAKRRAEIAR 925
|
|
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3546 (1253.3 bits), Expect = 0., P = 0.
Identities = 687/919 (74%), Positives = 765/919 (83%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXG 68
LE + E+VDLE +PIEEVFE L+CS+EGLT+ RL +FG N G
Sbjct: 12 LEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKFLKFLG 71
Query: 69 FMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXX 128
FMWNPLSWVME NGGG+ PDWQDFVGII LLVINSTISFIEE
Sbjct: 72 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 131
Query: 129 XXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
PK KVLRDGRW EQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALTG
Sbjct: 132 LMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 191
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ESLPVTK+ D V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ+GHFQ+VLTAI
Sbjct: 192 ESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQVLTAI 251
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIAVG++ EI++MYP+QHR YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 252 GNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 311
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF KGV+ + V+L+AA
Sbjct: 312 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAA 371
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
RASR ENQDAIDAAIVGMLADPK+ARAG++EVHFLPFNP DKRTALTYID++GN HR SK
Sbjct: 372 RASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSK 431
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL L + + ++ ++VHAVIDKFAERGLRSL VA Q++PE K+S G PWQ VGL+
Sbjct: 432 GAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLM 491
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGV+VKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ+KD
Sbjct: 492 PLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKD 551
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXX 608
SI ALPVDELIEKADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALKK
Sbjct: 552 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 611
Query: 609 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+
Sbjct: 612 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 671
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV GSY+A+M
Sbjct: 672 ALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMM 731
Query: 729 TVVFFWLMRKTDFFSDAFGVRSL-RTRPDE---MMAALYLQVSIISQALIFVTRSRSWSF 784
TV+FFW+ KTDFF FGV +L +T D+ + +A+YLQVSIISQALIFVTRSRSWSF
Sbjct: 732 TVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSF 791
Query: 785 IERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKF 844
+ERPG+ L AF++AQLVAT IAVYANWSFA IEG GWGWAGVIWLY+++ Y PLD +KF
Sbjct: 792 VERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKF 851
Query: 845 GIRYILSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNS 904
IRY LSG+AWD ++E + AFT +KD+GK TLHGLQ P+T +F+D+
Sbjct: 852 FIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTK-MFTDRTH 910
Query: 905 YRELSEIAEQAKRRAEVAR 923
EL+++AE+AKRRAE+AR
Sbjct: 911 VSELNQMAEEAKRRAEIAR 929
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3176 (1123.1 bits), Expect = 0., P = 0.
Identities = 618/929 (66%), Positives = 728/929 (78%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXX 67
+L+ I ES+DLE +P+EEVF+ LKC++EGLTS+E RL +FG N
Sbjct: 6 ALKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKFL 65
Query: 68 GFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXX 127
GFMWNPLSWVME +GGG+ D+ DFVGI+VLL+INSTISF+EE
Sbjct: 66 GFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEENNAGNAAA 125
Query: 128 XXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
PK K +RDG+W+E DA+ LVPGD++SIKLGDI+PADARLLEGDPLKIDQ+ LT
Sbjct: 126 ALMAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDPLKIDQATLT 185
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLPVTKNP V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST VGHFQKVLTA
Sbjct: 186 GESLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTTHVGHFQKVLTA 245
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSIAVG+ EI+++Y +Q R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIG+H
Sbjct: 246 IGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGAH 305
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEVF +G++++ +L+A
Sbjct: 306 RLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLMA 365
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
ARA+R ENQDAID AIV ML+DPKEARAG++E+HFLPF+P ++RTALTY+D +G HR S
Sbjct: 366 ARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRVS 425
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPE+IL + + + ++++KVHA IDKFAERGLRSLG+A QE+P+ + G PW V L
Sbjct: 426 KGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVAL 485
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSA+TI RAL+LGV+VKMITGDQLAI KETGRRLGMGTNMYPSSSLL +
Sbjct: 486 LPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDNN 545
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXX 607
++ VDELIE ADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALKK
Sbjct: 546 TEGVS---VDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADIG 602
Query: 608 XXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+GFML
Sbjct: 603 IAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFML 662
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
+ + W+FDF PFMVL+IAILNDGTIMTISKDRVKPSP PD WKLKEIFATGVVLG+YLAI
Sbjct: 663 LCVFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPTPDCWKLKEIFATGVVLGAYLAI 722
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRP-------------DEMMAALYLQVSIISQALI 774
MTVVFFW +T+FF + F VR+ ++M +A+YLQVS ISQALI
Sbjct: 723 MTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVYLQVSTISQALI 782
Query: 775 FVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLV 834
FVTRSRSWSF+ERPG LL AF+IAQLVA+ I+ ANW FA I GWGW GVIW++++V
Sbjct: 783 FVTRSRSWSFVERPGFLLVIAFLIAQLVASVISAMANWPFAGIRSIGWGWTGVIWIFNIV 842
Query: 835 TYFPLDILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPE 894
TY LD +KF +RY LSGK+WD ++E +TA T KK++G+ T HGL+ +
Sbjct: 843 TYMLLDPIKFLVRYALSGKSWDRMVEGRTALTGKKNFGQEERMAAWATEKRTQHGLETGQ 902
Query: 895 TNGIFSDKNSYRELSEIAEQAKRRAEVAR 923
++ ++NS EL+ +AE+AKRRAE+AR
Sbjct: 903 -KPVY-ERNSATELNNMAEEAKRRAEIAR 929
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3154 (1115.3 bits), Expect = 0., P = 0.
Identities = 618/914 (67%), Positives = 710/914 (77%)
Query: 10 EEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGF 69
+ + +DL +P+EEVFE L+ S +GL S + RL +FGPN GF
Sbjct: 13 DTFNRKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENRFVKFLGF 72
Query: 70 MWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXXX 129
MWNPLSWVME N PDW+DF GI+ LL+IN+TISF EE
Sbjct: 73 MWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFEENNAGNAAAAL 132
Query: 130 XXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 189
KT+VLRDG+W EQDASILVPGD+ISIKLGDI+PADARLLEGDPLKIDQS LTGE
Sbjct: 133 MARLALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSVLTGE 192
Query: 190 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 249
SLPVTK ++VFSGSTCKQGEIEAVVIATG TFFGK A LVDST+ GHFQ+VLT+IG
Sbjct: 193 SLPVTKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDVTGHFQQVLTSIG 252
Query: 250 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 309
NFCICSIAVG+V EIIIM+PVQHR YR GI+NLLVLLIGGIPIAMPTVLSVT+AIGSHRL
Sbjct: 253 NFCICSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRL 312
Query: 310 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 369
SQQGAITKRMTAIEEMAGMDVLC DKTGTLTLN LTVD+NLIEVF ++K+ ++LLA R
Sbjct: 313 SQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGR 372
Query: 370 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 429
ASR ENQDAIDAAIV MLADP+EARA +RE+HFLPFNPVDKRTA+TYIDSDG W+RA+KG
Sbjct: 373 ASRLENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKG 432
Query: 430 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 489
APEQ+L LC + ++ ++V+A+ID+FAE+GLRSL VA QEIPEK+ SPG PW+ GLLP
Sbjct: 433 APEQVLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLP 492
Query: 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 549
LFDPPRHDS ETI RAL+LGV VKMITGDQLAI KETGRRLGMGTNMYPSSSLLG + D
Sbjct: 493 LFDPPRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDE 552
Query: 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXXX 609
A+PVDELIE ADGFAGVFPEHKYEIVK LQE KH+ GMTGDGVNDAPALKK
Sbjct: 553 H-EAIPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIA 611
Query: 610 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669
VLT+PGLSVIISAVLTSRAIFQRM+NYT+YAVSITIRIVLGF L+A
Sbjct: 612 VADATDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLA 671
Query: 670 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 729
LIW++DF PFMVLIIAILNDGTIMTISKDRV+PSP P+SWKL +IFATG+V+G+YLA++T
Sbjct: 672 LIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFATGIVIGTYLALVT 731
Query: 730 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 789
V+F+W++ T FF F V+S+ +++ +A+YLQVSIISQALIFVTRSR WSF ERPG
Sbjct: 732 VLFYWIIVSTTFFEKHFHVKSIANNSEQVSSAMYLQVSIISQALIFVTRSRGWSFFERPG 791
Query: 790 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 849
LL AF++AQL AT IAVYAN SFA+I G GW WAGVIWLYSL+ Y PLD++KF Y
Sbjct: 792 TLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYIPLDVIKFVFHYA 851
Query: 850 LSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSYRELS 909
LSG+AW+ +L+ KTAFT KKDYGK + E G S S
Sbjct: 852 LSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQRSRSA---EELRG------SRSRAS 902
Query: 910 EIAEQAKRRAEVAR 923
IAEQ +RRAE+AR
Sbjct: 903 WIAEQTRRRAEIAR 916
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P19456 | PMA2_ARATH | 3, ., 6, ., 3, ., 6 | 0.8657 | 0.9924 | 0.9662 | no | no |
| P49380 | PMA1_KLULA | 3, ., 6, ., 3, ., 6 | 0.3730 | 0.8710 | 0.8943 | yes | no |
| Q9LV11 | PMA11_ARATH | 3, ., 6, ., 3, ., 6 | 0.8248 | 0.9967 | 0.9623 | no | no |
| P19657 | PMA2_YEAST | 3, ., 6, ., 3, ., 6 | 0.3838 | 0.8602 | 0.8384 | yes | no |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.8759 | 0.9956 | 0.9653 | N/A | no |
| Q58623 | Y1226_METJA | 3, ., 6, ., 3, ., - | 0.4160 | 0.8320 | 0.9540 | yes | no |
| P24545 | PMA1_ZYGRO | 3, ., 6, ., 3, ., 6 | 0.3841 | 0.8049 | 0.8076 | yes | no |
| Q43128 | PMA10_ARATH | 3, ., 6, ., 3, ., 6 | 0.7297 | 0.9794 | 0.9545 | no | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.8209 | 0.9989 | 0.9634 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.8183 | 0.9967 | 0.9623 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.8616 | 0.9945 | 0.9652 | N/A | no |
| Q42556 | PMA9_ARATH | 3, ., 6, ., 3, ., 6 | 0.8342 | 1.0 | 0.9675 | no | no |
| Q9SH76 | PMA6_ARATH | 3, ., 6, ., 3, ., 6 | 0.8353 | 0.9902 | 0.9631 | no | no |
| Q9SJB3 | PMA5_ARATH | 3, ., 6, ., 3, ., 6 | 0.8721 | 0.9913 | 0.9641 | yes | no |
| P09627 | PMA1_SCHPO | 3, ., 6, ., 3, ., 6 | 0.3724 | 0.8472 | 0.8509 | yes | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.8225 | 0.9956 | 0.9612 | N/A | no |
| Q9LY32 | PMA7_ARATH | 3, ., 6, ., 3, ., 6 | 0.7308 | 0.9869 | 0.9479 | no | no |
| Q9M2A0 | PMA8_ARATH | 3, ., 6, ., 3, ., 6 | 0.8406 | 0.9880 | 0.9620 | no | no |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.8193 | 0.9902 | 0.9520 | no | no |
| Q7XPY2 | PMA1_ORYSJ | 3, ., 6, ., 3, ., 6 | 0.8843 | 0.9945 | 0.9652 | yes | no |
| P20431 | PMA3_ARATH | 3, ., 6, ., 3, ., 6 | 0.8420 | 0.9945 | 0.9673 | no | no |
| P20649 | PMA1_ARATH | 3, ., 6, ., 3, ., 6 | 0.8622 | 0.9913 | 0.9641 | no | no |
| P23980 | PMA2_SOLLC | 3, ., 6, ., 3, ., 6 | 0.8160 | 0.7248 | 0.9502 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_1470038 | autoinhibited H+ ATPase (955 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| grail3.0023015401 | SubName- Full=Putative uncharacterized protein; (216 aa) | • | 0.899 | ||||||||
| fgenesh4_pm.C_LG_II000842 | inorganic pyrophosphatase (EC-3.6.1.1) (215 aa) | • | 0.899 | ||||||||
| fgenesh4_pg.C_LG_VII001101 | SubName- Full=Putative uncharacterized protein; (213 aa) | • | 0.899 | ||||||||
| eugene3.00090843 | inorganic pyrophosphatase (EC-3.6.1.1) (298 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pm.C_LG_XIV0223 | SubName- Full=Putative uncharacterized protein; (216 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_LG_XIII0040 | vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_1520062 | SubName- Full=Putative uncharacterized protein; (768 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_1330100 | vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa) | • | 0.899 | ||||||||
| estExt_Genewise1_v1.C_LG_X3050 | vacuolar H+-translocating inorganic pyrophosphatase (636 aa) | • | 0.899 | ||||||||
| estExt_Genewise1_v1.C_LG_I4261 | SubName- Full=Putative uncharacterized protein; (296 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 923 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-113 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-92 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 8e-89 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 5e-79 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 4e-78 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 2e-68 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-63 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 4e-61 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 8e-60 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 6e-58 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 8e-54 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-52 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-40 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 3e-37 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 7e-35 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-33 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 6e-33 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-31 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 1e-28 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 5e-28 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-26 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-26 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 1e-18 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 1e-17 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 2e-13 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 4e-08 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 2e-07 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 3e-07 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 6e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.003 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 0.004 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.004 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 0.004 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 1194 bits (3090), Expect = 0.0
Identities = 453/775 (58%), Positives = 559/775 (72%), Gaps = 23/775 (2%)
Query: 37 GLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96
GLTS E RL +GPN+L EKK S +LKFLGF WNPLSWVMEAAAI+AIAL N
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALEN------ 54
Query: 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPG 156
W DFV I+ LL++N+TI FIEEN AGNA AL +LAPK +VLRDG+W E AS LVPG
Sbjct: 55 -WVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPG 113
Query: 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVV 216
DV+ +K+GDIVPAD RL EGD +++DQ+ALTGESLPVTK D +SGST KQGE EAVV
Sbjct: 114 DVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173
Query: 217 IATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275
ATG++TFFGKAA LV ST GH QK+L+ IG F I I V ++ E+++++ + +
Sbjct: 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233
Query: 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335
R+G+ LVLL+GGIPIAMP VLSVTMA+G+ L+++ AI R+TAIEE+AGMD+LCSDK
Sbjct: 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293
Query: 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARA 395
TGTLTLNKL++D L F G +K+ V+L AA ASR E+QDAID A++G D KEAR
Sbjct: 294 TGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARD 351
Query: 396 GVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHAVIDK 454
G + + F+PF+PVDKRT T D + G + +KGAP+ IL LC+ ++++ +KV +D+
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDE 411
Query: 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKM 514
A RG R+LGVAR W +GLLPLFDPPRHD+ ETI RA +LGV VKM
Sbjct: 412 LASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463
Query: 515 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574
+TGD LAI KET RRLG+GTN+Y + LL D + + E++E ADGFA VFPEHK
Sbjct: 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLP-SGLGEMVEDADGFAEVFPEHK 522
Query: 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 634
YEIV+ LQ+R H+ GMTGDGVNDAPALKKAD+GIAVA ATDAARSA+DIVLTEPGLSVI+
Sbjct: 523 YEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIV 582
Query: 635 SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMT 694
A+L SR IFQRMK+Y IY ++ TIRIV F L+ LI F F P MV+IIAILNDGTIMT
Sbjct: 583 DAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMT 642
Query: 695 ISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTR 754
I+ D VKPS P W L+E+F VLG YL I T + + T FF D FG++ L
Sbjct: 643 IAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTTFFIDKFGLQLL--- 699
Query: 755 PDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVY 809
+ + +YLQVSI A IFVTR+ + + ERPG LL AFVIAQ++ATFIAVY
Sbjct: 700 HGNLQSFIYLQVSISGHATIFVTRTHGFFWSERPGKLLFGAFVIAQIIATFIAVY 754
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 546 bits (1408), Expect = 0.0
Identities = 263/911 (28%), Positives = 416/911 (45%), Gaps = 102/911 (11%)
Query: 20 ERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWV 77
+ E+ +L S GL+ +E RL +GPN+L EEKK S + KFL +P +
Sbjct: 26 LSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIIL 85
Query: 78 MEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKT 137
+ AA+++ + G D + I++++VIN+ + F++E A A AL +PK
Sbjct: 86 LLVAALLSAFV---GDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKA 142
Query: 138 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP 197
KVLRDG++ E AS LVPGD++ ++ GD+VPAD RLLE L++D+SALTGESLPV K
Sbjct: 143 KVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQA 202
Query: 198 YDE--------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV-GHFQ 242
+FSG+T G + +V+ATG T FGK A L+ + +V Q
Sbjct: 203 LPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQ 262
Query: 243 KVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNL------LVLLIGGIPIAMPT 296
+ L +G F + ++A ++ +R G L L L + +P +P
Sbjct: 263 RKLNKLGKF------LLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPA 316
Query: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV---------- 346
V+++ +A+G+ R+++ AI + + AIE + +DV+CSDKTGTLT NK+TV
Sbjct: 317 VVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGK 376
Query: 347 DRNLIEVFAKGVEKEHVILLAARASRTENQ-------DAIDAAIV------GMLADPKEA 393
D + ++ ++ A S T + D + A+V G D
Sbjct: 377 DIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGL 436
Query: 394 RAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALC-------NCREDVRK 446
+ +PF+ KR ++ +G + KGAPE IL C E+ +
Sbjct: 437 EVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLR 496
Query: 447 KVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ----LVGLLPLFDPPRHDSAETI 502
+ + + A GLR L VA +++ K+ + +GL + DPPR D E I
Sbjct: 497 TLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAI 556
Query: 503 RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL--- 559
G+ V MITGD + + G+ + + G + + AL +EL
Sbjct: 557 EELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAE----LDALSDEELAEL 612
Query: 560 IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD-ATDAAR 618
+E+ FA V PE K IV+ LQ+ H+ MTGDGVNDAPALK AD+GIA+ TDAA+
Sbjct: 613 VEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAK 672
Query: 619 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSP 678
A+DIVL + + I+ AV+ R ++ +K + +Y +S + VL +LI ++ F P
Sbjct: 673 EAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVL-TLLIYSLFNLFFLP 731
Query: 679 F---MVLIIAILNDGTI---MTISK------DRVKPSPQPDSWKLKEIFATGVVLGSYLA 726
+L I +L D + + R P+ + K + +++G A
Sbjct: 732 LTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSA 791
Query: 727 IMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE 786
I+ ++ F L L + + + +I L RSR F+
Sbjct: 792 ILFILTFLLYL----LGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLS 847
Query: 787 R-----PGLLLATAFVIA-QLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
L LA +I QL+ F+ F + WL ++ L
Sbjct: 848 SLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQ-----PTPLSLFEWLIAIAVALLLL 902
Query: 841 ILKFGIRYILS 851
+ Y L
Sbjct: 903 YIVVSELYKLK 913
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 358 bits (921), Expect = e-113
Identities = 186/588 (31%), Positives = 285/588 (48%), Gaps = 78/588 (13%)
Query: 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPKTK--VLRDGRWSEQDASILVPGDVISI 161
I+ L+++ + ++ A + +L L VLR+G W E A LVPGDV+ +
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 162 KLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGE 211
K G+ VPAD LL G +D+S LTGES PV K D VF+G+ G
Sbjct: 61 KSGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 212 IEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV 270
+ VV TG+ T G+ A +V + Q + NF I + + ++A + +Y
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENF-IFILFLLLLALAVFLYLF 178
Query: 271 QH----RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 326
+ L++L+ +P A+P ++V +A+G RL+++G + + + A+EE+
Sbjct: 179 IRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELG 238
Query: 327 GMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGM 386
+D LCSDKTGTLT NK+T+ I G E L+A + + D ++ A++
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQGVYI---DGGKEDNSSSLVACDNNYL-SGDPMEKALLKS 294
Query: 387 LADPKEARAGVRE---VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRED 443
+A G +E + PF+ V KR ++ DG+ KGAPE IL CN
Sbjct: 295 AELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCN---- 350
Query: 444 VRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIR 503
+ A +GLR L A +E+ + + +GL+ DP R D+ ETI
Sbjct: 351 ---NYEEKYLELARQGLRVLAFASKELED--------DLEFLGLITFEDPLRPDAKETIE 399
Query: 504 RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563
G+ V MITGD + K + LG+
Sbjct: 400 ELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------- 428
Query: 564 DGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 623
D FA V PE K +IV+ LQ++ HI MTGDGVNDAPALKKAD+GIA+ A++A+DI
Sbjct: 429 DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADI 483
Query: 624 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALI 671
VL + LS I+ AV R IF +K+ +A++ + ++ +L+ +I
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVI 531
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 312 bits (801), Expect = 1e-92
Identities = 225/800 (28%), Positives = 376/800 (47%), Gaps = 105/800 (13%)
Query: 16 SVDLERIPIEEVFEQLKCSRE-GLTS-DEGAHRLHVFGPNKLE-EKKESKVLKFLG-FMW 71
S + +EE +L+ + GL S E +HR G N+ + E+ ES KFL F+
Sbjct: 1 SKQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVK 60
Query: 72 NPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMA 131
NPL ++ A+A++++ + N D V I + ++I T+ F++E + + AL
Sbjct: 61 NPLILLLIASAVISVFMGN-------IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNK 113
Query: 132 NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESL 191
+ P+ ++R+G+ AS LVPGD++ + +GD VPAD R++E L ID+S LTGE+
Sbjct: 114 LVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETT 173
Query: 192 PVTK-------NPYDEV-------FSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ 237
PV+K ++ F G+ + G + +V+ TG +T FG ++ + +
Sbjct: 174 PVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEK 233
Query: 238 VGH-FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPT 296
QK + +G + ++ G++ I ++ Q + + + + L + IP +P
Sbjct: 234 PKTPLQKSMDLLGK-QLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPI 292
Query: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV------DRNL 350
+++VT+A+G R+S++ AI +++ ++E + ++V+CSDKTGTLT N +TV D
Sbjct: 293 IVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLH 352
Query: 351 IEVFAKGVEK-EHVILLAARASRTENQD--------------------------AIDAAI 383
+ A + + VI+ D A+
Sbjct: 353 TMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVAL 412
Query: 384 VGMLA-----DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS-KGAPEQILAL 437
+ +L D +E V EV PF+ K A+ + KGA EQ+L
Sbjct: 413 IELLMKFGLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKY 469
Query: 438 CN-----------CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG 486
C + R + + A GLR + A PEK + + +G
Sbjct: 470 CTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASG--PEKGQLT------FLG 521
Query: 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
L+ + DPPR E + + GV + MITGD RRLGM S S+ G+
Sbjct: 522 LVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP--SKTSQSVSGEK 579
Query: 547 KDA-SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605
DA L +++ K FA PEHK +IVK LQ+R + MTGDGVNDAPALK AD
Sbjct: 580 LDAMDDQQL--SQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLAD 637
Query: 606 IGIAVAD-ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 664
IG+A+ TD A+ A+D++LT+ + I+SA+ + IF +KN+ + +S ++ L
Sbjct: 638 IGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSV-AALS 696
Query: 665 FMLIALIWKFD--FSPFMVLIIAILNDGT------IMTISKDRVKPSPQP--DSWKLKEI 714
+ +A + F + +L I IL DG + + KD ++ P+P D K++
Sbjct: 697 LIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDL 756
Query: 715 FATGVVLGSYLAIMTVVFFW 734
+V + + T+ F
Sbjct: 757 IKKILVSAIIIVVGTLFVFV 776
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 301 bits (773), Expect = 8e-89
Identities = 233/836 (27%), Positives = 395/836 (47%), Gaps = 98/836 (11%)
Query: 23 PIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVMEAA 81
E + +L GLT+ E RL FGPN+ EEKK + + NP +++ A
Sbjct: 19 GKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYIL--A 76
Query: 82 AIMAIALANGGGRDPDWQDFVGIIVLLVINSTI-SFIEENNAGNAAAALMANLAPKTKVL 140
+M ++ D + II L+V+ S + FI+E+ A AA AL + VL
Sbjct: 77 MLMGVSYLT------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVL 130
Query: 141 R------DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVT 194
R +G E LVPGD+I + GDI+PADAR++ L I+QSALTGESLPV
Sbjct: 131 RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVE 190
Query: 195 K----------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 241
K + F G+ G +AVV+ATG T+FG A F
Sbjct: 191 KFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAF 250
Query: 242 QKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT 301
K + ++ I + V +V ++++ + + + L + +G P +P ++S
Sbjct: 251 DKGVKSVSKLLIRFMLV-MVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSN 309
Query: 302 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKE 361
+A G+ +S++ I K ++AI+ MD+LC+DKTGTLT +K+ +++++ + G E
Sbjct: 310 LAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSE 366
Query: 362 HVILLA--ARASRTENQDAIDAAIVGMLAD--PKEARAGVREVHFLPFNPVDKRTALTYI 417
V+ +A +T ++ +D A++ L + ++ + ++V +PF+ +R ++ +
Sbjct: 367 RVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVV-V 425
Query: 418 DSDGNWHR-ASKGAPEQILALCN----------CREDVRKKVHAVIDKFAERGLRSLGVA 466
++ R KGA E++L +C E + ++ + + +G+R + VA
Sbjct: 426 ENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVA 485
Query: 467 RQEIP------EKTKESPGAPWQLV--GLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 518
+ + KT E QL+ G L DPP+ + E I G+NVK++TGD
Sbjct: 486 TKTLKVGEADFTKTDEE-----QLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGD 540
Query: 519 QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL---IEKADGFAGVFPEHKY 575
+ + +G+ N + LLG D I L +EL + K FA + P K
Sbjct: 541 NEIVTARICQEVGIDANDF----LLGAD----IEELSDEELARELRKYHIFARLTPMQKS 592
Query: 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635
I+ L++ H G GDG+NDAPAL+KAD+GI+V A D A+ ASDI+L E L V+
Sbjct: 593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEE 652
Query: 636 AVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFM------VLIIAILND 689
V+ R F + Y S V ++ + F PF+ +LI +L D
Sbjct: 653 GVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASA-----FIPFLPMLSLHLLIQNLLYD 707
Query: 690 GTIMTISKDRVKPS--PQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFG 747
+ +T+ D++ +P W+ K + + +G +I + F LM +F F
Sbjct: 708 FSQLTLPWDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLM----WF--VFS 761
Query: 748 VRSLRTRPDEMMAALYLQVSIISQALIF-VTRSRSWSFIERPG---LLLATAFVIA 799
++ + + + + V ++SQ L+ + R+ FI+ +++AT V+A
Sbjct: 762 ANTVEEQ--ALFQSGWFVVGLLSQTLVVHMIRTEKIPFIQSRAAAPVMIATLLVMA 815
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 275 bits (705), Expect = 5e-79
Identities = 209/703 (29%), Positives = 322/703 (45%), Gaps = 118/703 (16%)
Query: 23 PIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWV-MEA 80
+EE L R+GLT ++ A RL +GPN++ EK +++ L NP +V M
Sbjct: 31 SLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVL 90
Query: 81 AAI---MAIALANGGGRDPDWQDFVGIIVLLV---INSTISFIEENNAGNAAAALMANLA 134
AAI L G + D G+I++L ++ + F +E + AA AL A +
Sbjct: 91 AAISFFTDYWLPLRRGEETDL---TGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVR 147
Query: 135 PKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
VLR + E LVPGD++ + GD++PAD RL+E L I Q+ LTG
Sbjct: 148 TTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTG 207
Query: 189 ESLPVTKNPYDEV-------------------------FSGSTCKQGEIEAVVIATGVHT 223
E+LPV K YD + F G+ G AVV+ATG T
Sbjct: 208 EALPVEK--YDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265
Query: 224 FFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLL 283
+FG A + T F + + S++ ++ +++M PV
Sbjct: 266 YFGSLAKSIVGTRAQTAFDR--------GVNSVSWLLIRFMLVMVPV------------- 304
Query: 284 VLLIGGI--------------------PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIE 323
VLLI G P +P ++S +A G+ ++++ + KR+ AI+
Sbjct: 305 VLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQ 364
Query: 324 EMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTEN--QDAIDA 381
MDVLC+DKTGTLT +++ ++ +L G + E V+ LA S ++ ++ +D
Sbjct: 365 NFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQ 421
Query: 382 AIV--GMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN 439
A+V AG R+V LPF+ V +R ++ D+ G KGA E++LA+
Sbjct: 422 AVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVAT 481
Query: 440 CRED----------VRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESP---GAPWQLV- 485
D R+++ A+ + + G R L VA +EIP + LV
Sbjct: 482 HVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVI 541
Query: 486 -GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 544
G L DPP+ +A I GV VK++TGD + + R +G+ P LLG
Sbjct: 542 RGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLG 597
Query: 545 QDKDASIAALPVDEL---IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601
+ I A+ L +E+ FA + P K ++K LQ H G GDG+NDAPAL
Sbjct: 598 TE----IEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPAL 653
Query: 602 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 644
+ AD+GI+V D A+ ++DI+L E L V+ V+ R F
Sbjct: 654 RDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 272 bits (698), Expect = 4e-78
Identities = 203/699 (29%), Positives = 326/699 (46%), Gaps = 108/699 (15%)
Query: 17 VDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMW----N 72
+ +P EE+++ EGL E G N+L +K L W N
Sbjct: 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHL---WVCYRN 103
Query: 73 PLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINST-ISFIEENNAGNAAAALMA 131
P + ++ ++ A + G+I L+V ST ++FI+E + AA AL A
Sbjct: 104 PFNILLTILGAISYATEDLFA--------AGVIALMVAISTLLNFIQEARSTKAADALKA 155
Query: 132 NLAPKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA 185
++ VLR + W E LVPGD+I + GD++PAD R+L+ L + Q++
Sbjct: 156 MVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQAS 215
Query: 186 LTGESLPVTK----------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232
LTGESLPV K NP + F G+ G +AVVIATG +T+FG+ A V
Sbjct: 216 LTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRV 275
Query: 233 DST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGG-- 289
++ FQ+ I ++ ++ +++M PV VLLI G
Sbjct: 276 SEQDSEPNAFQQ--------GISRVSWLLIRFMLVMAPV-------------VLLINGYT 314
Query: 290 ------------------IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 331
P +P +++ T+A G+ +LS+Q I KR+ AI+ MD+L
Sbjct: 315 KGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDIL 374
Query: 332 CSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARAS--RTENQDAIDAAIVGMLAD 389
C+DKTGTLT +K+ ++ + ++ G E V+ A S +T ++ +D A++ + +
Sbjct: 375 CTDKTGTLTQDKIVLENH-TDIS--GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDE 431
Query: 390 PKEARAGV--REVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-------- 439
+++ +PF+ +R ++ ++ + KGA E+IL +C+
Sbjct: 432 ESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEI 491
Query: 440 --CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ---LVGLLPLFDPP 494
+ + +++ V D +GLR + VA + +P + + A L G + DPP
Sbjct: 492 VPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPP 551
Query: 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554
+ +A ++ GV VK++TGD + + +G+ L+G D I L
Sbjct: 552 KETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGEV----LIGSD----IETL 603
Query: 555 PVDEL---IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611
DEL E+ FA + P HK IV L+ H+ G GDG+NDAPAL+ ADIGI+V
Sbjct: 604 SDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD 663
Query: 612 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 650
A D AR A+DI+L E L V+ V+ R F M Y
Sbjct: 664 GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKY 702
|
Length = 902 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 245 bits (628), Expect = 2e-68
Identities = 184/717 (25%), Positives = 316/717 (44%), Gaps = 87/717 (12%)
Query: 25 EEVFEQLKCS-REGL--TSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVM--- 78
E + +LK EG+ +S R V+G N+L EK FL +W LS
Sbjct: 46 EGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPP---KSFLQIVWAALSDQTLIL 102
Query: 79 -EAAAIMAIALA------NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALM- 130
AA++++ L + W + V I+V +++ ++ + + L
Sbjct: 103 LSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNR 162
Query: 131 ANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGES 190
A K V+R G+ + +V GD++S+ GD+VPAD + G L+ID+S++TGES
Sbjct: 163 EKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGES 222
Query: 191 LPVTKNPYDEVF--SGSTCKQGEIEAVVIATGVHTFFGKAAHLV-----DSTNQVGHFQK 243
P+ K P + F SG+ +G +V A GV++F GK + DST +
Sbjct: 223 DPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSE 282
Query: 244 VLTAIGNF-CICSIAVGIVA---EIIIMYPVQHRKYRDGIDNLLVLLIGGIPI---AMPT 296
+ IG F ++ + +V + + R + L I + I A+P
Sbjct: 283 LAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPE 342
Query: 297 V--LSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352
L+VT+A+ ++ + + + + A E M +CSDKTGTLT N ++V + I
Sbjct: 343 GLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIG 402
Query: 353 VFAKGVEK------EHV--ILLAARA-------------------SRTENQDAIDAAIVG 385
V +HV IL+ + S+TE A+ +
Sbjct: 403 EQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTEC--ALLDFGLL 460
Query: 386 MLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALC----NC- 440
+L D +E RA + V PFN K ++ S G + KGA E +L C +
Sbjct: 461 LLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSN 520
Query: 441 ------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT---KESPGAPWQLVGLLPLF 491
+D + + VI+ A LR++ +A ++ + K+ P L+G++ +
Sbjct: 521 GEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIK 580
Query: 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASI 551
DP R E ++ G+ V+M+TGD + K R G+ T + + S+
Sbjct: 581 DPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILT---FGGLAMEGKEFRSL 637
Query: 552 AALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611
+D ++ K A P K +V L++ + +TGDG NDAPALK AD+G ++
Sbjct: 638 VYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMG 697
Query: 612 DA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY-----TIYAVSITIRIV 662
+ T+ A+ ASDI+L + + I+ AV R ++ ++ + T+ V++ + V
Sbjct: 698 ISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFV 754
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 227 bits (581), Expect = 2e-63
Identities = 161/610 (26%), Positives = 244/610 (40%), Gaps = 104/610 (17%)
Query: 81 AAIMAIALANGGGRDPDWQDFVGIIVLLVINSTIS-FIEE---NNAGNAAAALMANLAPK 136
A I A A + P + + +++ L + ++E A A AL+ LAPK
Sbjct: 156 ATIGAYAYSLYATLFPVYFEEAAMLIFLF---LLGRYLEARAKGRARRAIRALLD-LAPK 211
Query: 137 T--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVT 194
T V DG E + GD++ ++ G+ +P D ++ G +D+S LTGESLPV
Sbjct: 212 TATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVE 270
Query: 195 KNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQVGHFQKVLTAI-GNFC 252
K P DEVF+G+ G + V G T + LV ++ + Q++ + F
Sbjct: 271 KKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFV 330
Query: 253 ICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLS 310
+ + + + + + L +L+ P A+ L+ AI G R +
Sbjct: 331 PVVLVIAALT-FALWPLFGGGDWETALYRALAVLVIACPCAL--GLATPTAILVGIGRAA 387
Query: 311 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARA 370
++G + K A+E +A +D + DKTGTLT K V +V A +++ ++ LAA
Sbjct: 388 RRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEV----TDVVALDGDEDELLALAAAL 443
Query: 371 SRTENQ------DAI-DAAIVGMLADPKEARA----GVREVHFLPFNPVDKRTALTYIDS 419
E AI AA L D ++ GV VD L
Sbjct: 444 ---EQHSEHPLAKAIVKAAAERGLPDVEDFEEIPGRGVEAE-------VDGERVL----- 488
Query: 420 DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPG 479
G L D+ + I+ G + VA
Sbjct: 489 --------VGNAR---LLGEEGIDL-PLLSERIEALESEGKTVVFVAVDG---------- 526
Query: 480 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 539
+LVG++ L D R D+ E I LG+ V M+TGD + + LG
Sbjct: 527 ---KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELG-------- 575
Query: 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 599
+DE+ A + PE K EIV+ LQ M GDG+NDAP
Sbjct: 576 ----------------IDEV------RAELLPEDKAEIVRELQAEGRKVAMVGDGINDAP 613
Query: 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK-NYTIYAVSIT 658
AL AD+GIA+ TD A A+D+VL LS + A+ SRA + +K N
Sbjct: 614 ALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNA 673
Query: 659 IRIVLGFMLI 668
I I L +
Sbjct: 674 IAIPLAAGGL 683
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 217 bits (555), Expect = 4e-61
Identities = 142/581 (24%), Positives = 237/581 (40%), Gaps = 82/581 (14%)
Query: 106 VLLVINSTISFIEENNAGNAAAAL--MANLAPKT--KVLRDGRWSEQDASILVPGDVISI 161
+LL + +EE G A+ AL + LAP T + DG E L GD++ +
Sbjct: 23 LLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIV 82
Query: 162 KLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 221
+ G+ +P D ++ G+ +D+SALTGES+PV K DEVF+G+ G + V G
Sbjct: 83 RPGERIPVDGVVISGESE-VDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGE 141
Query: 222 HTFFGKAAHLV-DSTNQVGHFQKVLTAI-GNFCICSIAVGIVAEIIIMYPVQHRKYRDGI 279
+ + LV ++ + Q++ I + +A+ ++ ++ + +
Sbjct: 142 DSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLT-FVVWLAL---GALGAL 197
Query: 280 DNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 337
L +L+ P A+ L+ +AI +++G + K A+E++A + + DKTG
Sbjct: 198 YRALAVLVVACPCAL--GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTG 255
Query: 338 TLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGV 397
TLT K TV IE E +L A A + + AIV
Sbjct: 256 TLTTGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLARAIV----------RYA 303
Query: 398 REVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILA----LCNCREDVRKKVHAVID 453
++ D + + G A+ E++ + +++
Sbjct: 304 KKRGLELPKQED----VEEVPGKG--VEATVDGGEEVRIGNPRFLELAIEPISASPDLLN 357
Query: 454 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NV 512
+ +G + VA +L+G++ L D R ++ E I G +
Sbjct: 358 EGESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKL 404
Query: 513 KMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572
M+TGD + + LG +DE+ A + PE
Sbjct: 405 VMLTGDNRSAAEAVAAELG------------------------IDEV------HAELLPE 434
Query: 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 632
K IVK LQE + M GDG+NDAPAL AD+GIA+ +D A A+DIVL LS
Sbjct: 435 DKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSS 494
Query: 633 IISAVLTSRAIFQRMK-NYTIYAVSITIRIVLGFMLIALIW 672
+ +A+ SR + +K N + I L + +W
Sbjct: 495 LPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLW 535
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 221 bits (564), Expect = 8e-60
Identities = 190/796 (23%), Positives = 340/796 (42%), Gaps = 150/796 (18%)
Query: 9 LEEIKNE-SVDLERIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKLEEKKES-KVLK 65
L+E+K E +D ++ ++E+ + GL++ A L GPN L + + +K
Sbjct: 6 LDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVK 65
Query: 66 FLGFMWNPLSWVMEAAAIMA-IALANGGGRDPDWQD---FVGII--VLLVINSTISFIEE 119
F ++ S ++ AI+ +A + + Q+ ++G++ +++I S+ +E
Sbjct: 66 FCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQE 125
Query: 120 NNAGNAAAALMANLAPKTK-VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP 178
+ + N+ P+ V+RDG +A +V GD++ +K GD +PAD R++
Sbjct: 126 AKSSKIMESF-KNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG 184
Query: 179 LKIDQSALTGESLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKA 228
K+D S+LTGES P T+ NP + F + C +G +V+ TG T G+
Sbjct: 185 CKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRI 244
Query: 229 AHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGID 280
A L ++ HF ++T + F S + +I+ Y + + +
Sbjct: 245 ASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSF---FILSLILGY-----TWLEAVI 296
Query: 281 NLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 340
L+ +++ +P + ++V + + + R++++ + K + A+E + +CSDKTGTLT
Sbjct: 297 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 356
Query: 341 LNKLTV-----DRNLIE----------VFAKGVEK----EHVILLAARASRTENQDAI-- 379
N++TV D + E F K + L RA Q+ +
Sbjct: 357 QNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPI 416
Query: 380 -------DAAIVGML-------ADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHR 425
DA+ +L E R +V +PFN +K + + D R
Sbjct: 417 LKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPR 476
Query: 426 ---ASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPE 472
KGAPE+IL C+ E++++ + G R LG +P+
Sbjct: 477 HLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPD 536
Query: 473 K---------TKES--PGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 521
+ T + P VGL+ + DPPR + + + + G+ V M+TGD
Sbjct: 537 EQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPI 596
Query: 522 IGKETGRRLGMGTNMYPSSSLLGQDKDASIAA---LPVDELIEKADG------------- 565
K + +G+ + G + IAA +PV ++ +
Sbjct: 597 TAKAIAKGVGIISE--------GNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMT 648
Query: 566 ---------------FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+
Sbjct: 649 SEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 708
Query: 611 ADA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669
A +D ++ A+D++L + + I++ V R IF +K Y ++ I
Sbjct: 709 GIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP--------- 759
Query: 670 LIWKFDFSPFMVLIIA 685
+ +PF++ IIA
Sbjct: 760 -----EITPFLIFIIA 770
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 197 bits (504), Expect = 6e-58
Identities = 76/223 (34%), Positives = 129/223 (57%), Gaps = 4/223 (1%)
Query: 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIK 162
I++L++IN+ + +E A A AL L P V+RDG+ E A LV GD++ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 163 LGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVH 222
GD VPAD R++EG L++D+SALTGESLPV K+ D VF+G+ GE++ +V ATG
Sbjct: 62 PGDRVPADGRIIEGS-LEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 223 TFFGKAAHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDN 281
T GK A LV+ Q++L + + I + + + +++ + + + +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKI-LVPIVLALAILVFLIWFFRGGDFLEALLR 179
Query: 282 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 324
L +L+ P A+P + + +A+G+ RL+++G + K ++A+E
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 8e-54
Identities = 147/587 (25%), Positives = 242/587 (41%), Gaps = 93/587 (15%)
Query: 101 FVGIIVLLVINSTISFIEENNAGNAAAAL--MANLAPKT--KVLRDGRWSEQDASILVPG 156
F +L+ ++E G A+ AL +A L P T + DG E +L PG
Sbjct: 54 FDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQPG 113
Query: 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVV 216
D++ + G+ +P D ++EG+ ++D+S +TGESLPV K D V +G+ G +
Sbjct: 114 DIVRVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRA 172
Query: 217 IATGVHTFFGKAAHLVD----STNQVGHFQKVLTAIGNFCICSIAV-GIVAEIIIMYPVQ 271
ATG T + LV S + + + +IA+ V +I+
Sbjct: 173 TATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLILGADFV 232
Query: 272 HRKYRDGIDNLLVLLIG---GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 328
+ VL+I + +A PTV+ A+ + ++ G + K A+E A +
Sbjct: 233 FALEV----AVTVLIIACPCALGLATPTVI----AVATGLAAKNGVLIKDGDALERAANI 284
Query: 329 DVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLA 388
D + DKTGTLT K TV + VF + E + L AA + +E+ + AIV
Sbjct: 285 DTVVFDKTGTLTQGKPTV--TDVHVFGESDRDELLALAAALEAGSEH--PLAKAIV---- 336
Query: 389 DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKV 448
+ + D + + I +G + L N + +
Sbjct: 337 ------SYAKAKGITLSQVSDFKA-IPGIGVEGTVE-------GHTIQLGNEKLLGENGL 382
Query: 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNL 508
+ G S+ VA +L G+L L D + ++ E I+
Sbjct: 383 KTDGEVEEGGGTTSVLVAVNG-------------ELAGVLALADQLKPEAKEVIQALKRR 429
Query: 509 GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568
G+ M+TGD K + LG IE + A
Sbjct: 430 GIEPVMLTGDNRKTAKAVAKELG----------------------------IE--NVRAE 459
Query: 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 628
V P+ K ++K+LQE+ + M GDG+NDAPAL +AD+GIA+ TD A A+D+VL
Sbjct: 460 VLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRN 519
Query: 629 GLSVIISAVLTSRAIFQRMKN-------YTIYAVSITIRIVLGFMLI 668
L+ + +A+ SR +R+K Y + A+ I ++ ++
Sbjct: 520 DLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYPAGIL 566
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 192 bits (490), Expect = 2e-52
Identities = 167/624 (26%), Positives = 255/624 (40%), Gaps = 111/624 (17%)
Query: 78 MEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKT 137
M AA+ A+A+ ++ + +++L I T+ A A ALM LAP T
Sbjct: 5 MALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDT 56
Query: 138 -KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196
+VLR G E L GDV+ +K G+ VP D +L G +D+SALTGES+PV K
Sbjct: 57 ARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST-VDESALTGESVPVEKA 115
Query: 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQVGHFQKVLTAIGNFCICS 255
P DEVF+G+ G + VV + K +LV ++ ++ Q+ + +
Sbjct: 116 PGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPV 175
Query: 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQG 313
+ +A ++ ++ ++ + LVLL+ P A+ V+S A ++ G
Sbjct: 176 VLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCAL--VISAPAAYLSAISAAARHG 231
Query: 314 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDR-NLIEVF--AKGVEK--EHVILLAA 368
+ K A+E +A + + DKTGTLT + V EV A E+ H + A
Sbjct: 232 ILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPAEVLRLAAAAEQASSHPLARAI 291
Query: 369 RASRTENQDAID-AAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
+ ++ + G GVR V VD I + + A
Sbjct: 292 VDYARKRENVESVEEVPGE---------GVRAV-------VDGGEV--RIGNPRSLEAAV 333
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
PE VH D +G
Sbjct: 334 GARPESAGKTI---------VHVARDG----------------------------TYLGY 356
Query: 488 LPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
+ L D PR D+AE I LG+ V M+TGD+ A+ + R LG
Sbjct: 357 ILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG--------------- 401
Query: 547 KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606
+DE+ A + PE K EIVK L+E+ M GDG+NDAPAL AD+
Sbjct: 402 ---------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADV 446
Query: 607 GIAV-ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK-NYTIYAVSITIRIVLG 664
GIA+ A +D A +D+VL LS + A+ +R + +K N I I + I+L
Sbjct: 447 GIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLA 506
Query: 665 FMLIALIWKFDFSPFMVLIIAILN 688
+ +W ++ ILN
Sbjct: 507 LFGVLPLWLAVLGHEGSTVLVILN 530
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 1e-40
Identities = 104/345 (30%), Positives = 157/345 (45%), Gaps = 54/345 (15%)
Query: 427 SKGAPEQILALCN-----------CREDVRKKVHAVIDKFAER-GLRSLGVARQEIPEKT 474
KGAPE +L C + ++ + +VI + LR L +A ++IP+
Sbjct: 449 VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPR 508
Query: 475 KESPGAPWQ----------LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK 524
+E + +G++ + DPPR + A+ I + G+ V MITGD +
Sbjct: 509 EEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAE 568
Query: 525 ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG-----------FAGVFPEH 573
RR+G + D+D + + E E F+ V P H
Sbjct: 569 AICRRIG----------IFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSH 618
Query: 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633
K E+V+ LQE+ I MTGDGVNDAPALKKADIGIA+ T+ A+ ASD+VL + + I
Sbjct: 619 KSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATI 678
Query: 634 ISAVLTSRAIFQRMKNYTIYAVSITI-RIVLGFMLIALIWKFDFSPFMVLIIAILNDGTI 692
++AV RAI+ MK + Y +S I +V F+ AL P +L + ++ DG
Sbjct: 679 VAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLP 738
Query: 693 MTI------SKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVV 731
T KD + P+ + E TG + YL + V
Sbjct: 739 ATALGFNPPDKDIMWKPPR----RPDEPLITGWLFFRYLVVGVYV 779
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 150 bits (382), Expect = 3e-37
Identities = 173/949 (18%), Positives = 308/949 (32%), Gaps = 264/949 (27%)
Query: 36 EGLTSDEGAHRLHVFGPNKLEEKKES--KVLK------FLGF------MWNPLSWVMEAA 81
GLT+ + A R +G N++E S ++LK F F +W + +
Sbjct: 138 NGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLDEYYYYSL 197
Query: 82 AIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR 141
I+ ++ I L V + + +++ V+R
Sbjct: 198 CIVFMS--------------STSISLSVYQIRKQMQRLRDMVHKPQSVI--------VIR 235
Query: 142 DGRWSEQDASILVPGDVISIKL--GDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD 199
+G+W + LVPGD++SI +P D+ LL G + +++S LTGES+PV K P
Sbjct: 236 NGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCI-VNESMLTGESVPVLKFPIP 294
Query: 200 E------------------VFSG-------STCKQGEIEAVVIATGVHTFFGKAAHLVDS 234
+ +F G A+V+ TG T G+ LV S
Sbjct: 295 DNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQ---LVRS 351
Query: 235 ------TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIG 288
+ + + I +I + + +L ++ I
Sbjct: 352 ILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRP--LGKIILRSLDIITI- 408
Query: 289 GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL---- 344
+P A+P LS+ + RL ++G I +DV C DKTGTLT + L
Sbjct: 409 VVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRG 468
Query: 345 -------------------TVDRNLIEVFA-------------------KGVEKEHVILL 366
+ A K E L
Sbjct: 469 VQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLE 528
Query: 367 AARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTA-LTYIDSDGNWHR 425
S + + D + + F+ +R + + + + +
Sbjct: 529 EDDESAEPTS-----ILAVVRTDDPPQELSI--IRRFQFSSALQRMSVIVSTNDERSPDA 581
Query: 426 ASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT--------KES 477
KGAPE I +LC+ E V V+ + G R L +A +E+P+ T +++
Sbjct: 582 FVKGAPETIQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDA 640
Query: 478 PGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY 537
+ +G + +P + D+ E I+ + MITGD R G+ +
Sbjct: 641 VESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGI---VN 697
Query: 538 PSSSLL-------GQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590
PS++L+ K I +D + + +P + + L R H+ M
Sbjct: 698 PSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLA-M 756
Query: 591 TGD--------------------------------------------------GVNDAPA 600
+G G ND A
Sbjct: 757 SGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGA 816
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LK+AD+GI++++A A A+ +S + + + R A+ + +
Sbjct: 817 LKQADVGISLSEAE--ASVAAPFTSKLASISCVPNVIREGRC-----------ALVTSFQ 863
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
+ L +LI + S + LI + L DG +TI
Sbjct: 864 MFKYMALYSLIQFYSVS-ILYLIGSNLGDGQFLTID------------------------ 898
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQ-ALIFVTRS 779
L ++ V + R + S + RP + ++Y+ S++ Q L +++
Sbjct: 899 ----LLLIFPVALLMSR-----NKPLKKLS-KERPPSNLFSVYILTSVLIQFVLHILSQV 948
Query: 780 RSWSFIER-----------------PGLLLATAFVIA--QLVATFIAVY 809
+ P LL F ++ Q + T I
Sbjct: 949 YLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSFQYLITAIVNS 997
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 7e-35
Identities = 96/303 (31%), Positives = 151/303 (49%), Gaps = 32/303 (10%)
Query: 80 AAAIMAIALANGGGRDPDWQDFVG---IIVLLVINSTISFIEENNAGNAAAALMANLAPK 136
AA ++ LA + FV I+++LV N+ + +E NA A AL +
Sbjct: 15 LAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEH 74
Query: 137 TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196
KVLRDGRWS A LVPGD++ + +GD VPAD R+L L++DQS LTGES+ V K+
Sbjct: 75 AKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKH 134
Query: 197 ----PYDE---------VFSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDSTNQVGHFQ 242
P + +FSG+ G+ VV+ TG+ T GK + + + Q
Sbjct: 135 TESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQ 194
Query: 243 KVLTAIGNFC------ICSIAVGIVAEIIIMYPV-QHRKYRDGIDNLLV---LLIGGIPI 292
K L G IC I V ++ P + I + L + IP
Sbjct: 195 KKLDEFGELLSKVIGLIC-ILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPE 253
Query: 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352
+P V++ +A+G+ +++++ AI +++ ++E + V+CSDKTGTLT N+++V +
Sbjct: 254 GLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSV----CK 309
Query: 353 VFA 355
V A
Sbjct: 310 VVA 312
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 3e-33
Identities = 102/371 (27%), Positives = 166/371 (44%), Gaps = 62/371 (16%)
Query: 36 EGLTSDEGAHRLHVFGPNKLEEKKESKVLK-FLGFMWNPLSWVMEAAAIMAIALANGGGR 94
EGLT DE HRL G N+LE L + N + V+ AA ++ A+
Sbjct: 25 EGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH----- 79
Query: 95 DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILV 154
DW + I ++ +N I FI+E A +L +P V+R+G+ D+ LV
Sbjct: 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLV 137
Query: 155 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY------DEV------- 201
PGD+ +K GD +PAD RL+E D++ LTGESLPV K+ + ++
Sbjct: 138 PGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRIN 197
Query: 202 --FSGSTCKQGEIEAVVIATGVHTFFGKAA---------------------------HLV 232
FS S +G + + IAT +++ G A L
Sbjct: 198 LAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILK 257
Query: 233 DSTNQVGHF---------QKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLL 283
+ G F + L+ + C + I+ II+M + ++ +
Sbjct: 258 VTKKVTGAFLGLNVGTPLHRKLSKLAVILFC---IAIIFAIIVMAAHKFDVDKEVAIYAI 314
Query: 284 VLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 343
L I IP ++ VLS+TMA+G+ +S++ I +++ A+E + ++ +CSDKTGT+T K
Sbjct: 315 CLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGK 374
Query: 344 LTVDRNLIEVF 354
+ + I F
Sbjct: 375 MIARQIWIPRF 385
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 6e-33
Identities = 129/506 (25%), Positives = 212/506 (41%), Gaps = 84/506 (16%)
Query: 138 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP 197
+ DG A+ L GD++ ++ G+I+P+D ++EG +D+SA+TGES PV +
Sbjct: 108 LLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRES 166
Query: 198 ---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCIC 254
+ V G+ ++ + A TF + LV+ + QK I I
Sbjct: 167 GGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAER----QKTPNEIALT-IL 221
Query: 255 SIAVGIVAEIII--MYPVQHRKYRDG----IDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
+ ++ + + +YP Y G + L+ LL+ IP + +LS G R
Sbjct: 222 LSGLTLIFLLAVATLYPFAI--YSGGGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDR 279
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLIEVFAKGVEKEHVILLA 367
++Q I A+E +D L DKTGT+TL N+ + I V GV +E + A
Sbjct: 280 VTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE--FIPV--PGVSEEELADAA 335
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVH----FLPFNPVDKRTALTYIDSDGNW 423
AS ++ +IV LA ++ F+PF +T ++ +D G
Sbjct: 336 QLAS-LADETPEGRSIV-ELAKKLGIELREDDLQSHAEFVPFT---AQTRMSGVDLPGG- 389
Query: 424 HRASKGAPEQILALCNCRE-DVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPW 482
KGA + I R + + + A +D+ + G L V
Sbjct: 390 REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG------------- 436
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYP 538
+++G++ L D + E +G+ MITGD AI E G
Sbjct: 437 RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG----------- 485
Query: 539 SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 598
VD+ I +A PE K ++++ Q + MTGDG NDA
Sbjct: 486 -----------------VDDFIAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDA 522
Query: 599 PALKKADIGIAVADATDAARSASDIV 624
PAL +AD+G+A+ T AA+ A+++V
Sbjct: 523 PALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 1e-31
Identities = 113/444 (25%), Positives = 191/444 (43%), Gaps = 73/444 (16%)
Query: 351 IEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDK 410
I VFAK + H L N++ + + E PF+ K
Sbjct: 482 IHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAE---FPFDSEIK 538
Query: 411 RTALTYIDSDGNWHRA-SKGAPEQILALCNC----------------REDVRKKVHAVID 453
R A Y D+ G + +KGA E+I+ C+ RE + + ++
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESL-- 596
Query: 454 KFAERGLRSLGVARQEI---------------PEKTKESPGAPWQLVGLLPLFDPPRHDS 498
A GLR L A + T ES + +GL+ ++DPPR++S
Sbjct: 597 --AAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESD---LEFLGLIGIYDPPRNES 651
Query: 499 AETIRRALNLGVNVKMITGDQLAIGKETGRRLG-MGTNMYPSSS-------LLGQDKDAS 550
A + + G+NV M+TGD K + +G + N + G DA
Sbjct: 652 AGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA- 710
Query: 551 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610
++ VD+L A P+ K ++++ L RK C MTGDGVND+P+LK A++GIA+
Sbjct: 711 LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770
Query: 611 A-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669
+ +D A+ ASDIVL++ + I++A+ R +F + + ++ ++ + + ++I
Sbjct: 771 GINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAI-LLIIG 829
Query: 670 LIWK-------FDFSPFMVL-IIAILNDGTIMTISKDRVKPS----PQPDS------WKL 711
L ++ F SP +L I I + M + ++ P D+ +L
Sbjct: 830 LAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKEL 889
Query: 712 -KEIFATGVVLG-SYLAIMTVVFF 733
++FA G LG S LA T + +
Sbjct: 890 IIDMFAYGFFLGGSCLASFTGILY 913
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 1e-28
Identities = 152/528 (28%), Positives = 227/528 (42%), Gaps = 91/528 (17%)
Query: 128 ALMANLAPKTKV-LRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 186
ALMA L P+T LRDG E + L PGDVI + G +PAD +LL D+SAL
Sbjct: 236 ALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESAL 293
Query: 187 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ--------V 238
TGES+PV + ++V +G+T + V++ + + HL++ + +
Sbjct: 294 TGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFI 353
Query: 239 GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVL 298
F ++ T + ++ V +V ++ P Q YR L +LLI G P A+ V+
Sbjct: 354 DRFSRIYTPA--IMLVALLVILVPPLLFAAPWQEWIYR----GLTLLLI-GCPCAL--VI 404
Query: 299 SVTMAIGS--HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK 356
S AI S +++GA+ K A+E++ + + DKTGTLT K V I
Sbjct: 405 STPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTD--IHPAT- 461
Query: 357 GVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL-- 414
G+ + ++ LAA A++ LA A VR L + + AL
Sbjct: 462 GISESELLALAA---------AVEQGSTHPLAQAIVREAQVRG---LAIPEAESQRALAG 509
Query: 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT 474
+ I+ N R AP K+ + D FA + + E KT
Sbjct: 510 SGIEGQVNGERVLICAPG--------------KLPPLADAFAGQ------INELESAGKT 549
Query: 475 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534
++GL+ L D R D+ + I LG+ M+TGD
Sbjct: 550 VVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDN--------------- 594
Query: 535 NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594
P ++ A+IA EL D AG+ PE K + V L + + M GDG
Sbjct: 595 ---PRAA-------AAIAG----EL--GIDFRAGLLPEDKVKAVTELNQHAPL-AMVGDG 637
Query: 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA 642
+NDAPA+K A IGIA+ TD A +D LT L + + SRA
Sbjct: 638 INDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 5e-28
Identities = 133/606 (21%), Positives = 255/606 (42%), Gaps = 84/606 (13%)
Query: 72 NPLSWVMEAAAIMAIALA--------NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123
NP+ +V+E ++A+ L R + F+ +++ LV + + E
Sbjct: 32 NPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGK 91
Query: 124 NAAAALMANLAPKT--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKI 181
A AL ++ +DG + DAS L G ++ + G+ +P D ++++G +
Sbjct: 92 AQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATV 150
Query: 182 DQSALTGESLPVTKNP---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV 238
D+SA+TGES PV K +D V G++ +E + + H+F K LV+ +
Sbjct: 151 DESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATR- 209
Query: 239 GHFQKVLTAIGNFCIC-SIAVGIVAEIIIMYPV-QHRKYRDGIDNLLVLLIGGIPIAMPT 296
+K I F + ++ + + I+ MYP+ + + I L+ L + IP +
Sbjct: 210 ---KKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLIPTTIGG 266
Query: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLIEVFA 355
+LS G R++Q + K ++E ++VL DKTGT+T N++ I V +
Sbjct: 267 LLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADA--FIPVKS 324
Query: 356 KGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415
E+ L+ A + D + + LA + ++PF + + +
Sbjct: 325 SSFER----LVKAAYESSIADDTPEGRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGVK 380
Query: 416 YIDSDGNWHRASKGAPEQILA-LCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT 474
+ + KGAP ++ + + + A++ +++G L V
Sbjct: 381 FTTRE-----VYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNE---- 431
Query: 475 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QL---AIGKETGRRL 530
++G++ L D + E R +G+ M TGD +L I KE G
Sbjct: 432 ---------ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG--- 479
Query: 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590
VD + + PE K +++ Q + HI M
Sbjct: 480 -------------------------VDRFVAECK------PEDKINVIREEQAKGHIVAM 508
Query: 591 TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 650
TGDG NDAPAL +A++G+A+ T +A+ A++++ + + ++ VL + + +
Sbjct: 509 TGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSL 568
Query: 651 TIYAVS 656
T ++++
Sbjct: 569 TTFSIA 574
|
Length = 673 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 1e-26
Identities = 139/581 (23%), Positives = 233/581 (40%), Gaps = 89/581 (15%)
Query: 70 MWNPLSWVMEAAAIM----AIALANGGGRDPDWQDFVGII--VLLVINSTISFIEENNAG 123
NP+ +++ +++ IA A+ G + F II +L + +F E G
Sbjct: 30 WRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEG 89
Query: 124 NAAAALMANLAPKTK-------VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176
A A+ TK + DG + A L GD++ ++ GD++P D ++EG
Sbjct: 90 RGKA--QADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG 147
Query: 177 DPLKIDQSALTGESLPVTKNP---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 233
+D+SA+TGES PV K + V G+ + A TF + LV+
Sbjct: 148 VA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVE 206
Query: 234 STNQVGHFQKVLTAIG-NFCICSIAVGIVAEIIIMYPVQHRKYRD---GIDNLLVLLIGG 289
+ +K I + ++ + + ++P Y + L+ LL+
Sbjct: 207 GAQR----RKTPNEIALTILLIALTLVFLLVTATLWPFAA--YGGNAISVTVLVALLVCL 260
Query: 290 IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDR 348
IP + +LS G R+ I A+E +D L DKTGT+TL N+L +
Sbjct: 261 IPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEF 320
Query: 349 NLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPV 408
+ A+GV+++ + A AS + D + + +LA R + F
Sbjct: 321 ----IPAQGVDEKTLADAAQLASLAD--DTPEGKSIVILAKQLGIREDDVQSLHATFVEF 374
Query: 409 DKRTALTYIDSDGNWHRASKGAPEQILALCNCREDV-RKKVHAVIDKFAERGLRSLGVAR 467
+T ++ I+ D N KGA + I + +D+ A +G L V
Sbjct: 375 TAQTRMSGINLD-NGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE 433
Query: 468 QEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIG 523
++ G++ L D + E + +G+ MITGD AI
Sbjct: 434 DN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA 480
Query: 524 KETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE 583
E G VD+ I +A PE K ++++ Q
Sbjct: 481 AEAG----------------------------VDDFIAEAT------PEDKIALIRQEQA 506
Query: 584 RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 507 EGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 2e-26
Identities = 134/537 (24%), Positives = 207/537 (38%), Gaps = 148/537 (27%)
Query: 138 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP 197
K+ G E A+ L GD++ ++ G+I+PAD ++EG +D+SA+TGES PV +
Sbjct: 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRES 166
Query: 198 ---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK----------- 243
+ V G+ I + A +F + LV+ + QK
Sbjct: 167 GGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKR----QKTPNEIALTILL 222
Query: 244 -VLTAIGNFCIC-------SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMP 295
LT I F + + G I + L+ LL+ IP +
Sbjct: 223 AGLTII--FLLVVATLPPFAAYSGGALSITV---------------LVALLVCLIPTTIG 265
Query: 296 TVLSVTMAIG---SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLI 351
+LS AIG R+ Q I A+E +D L DKTGT+TL N+ +
Sbjct: 266 GLLS---AIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE---- 318
Query: 352 EVF--AKGVEKEHVILLAARASRTENQDAIDAAIVGMLADP-----------------KE 392
F GV +E + DAA + LAD +E
Sbjct: 319 --FLPVPGVTEE---------------ELADAAQLSSLADETPEGRSIVVLAKQRFNLRE 361
Query: 393 ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAV 451
F+PF+ +T ++ +D DG KGA + I ++ A
Sbjct: 362 RDLQSLHATFVPFS---AQTRMSGVDLDG--REIRKGAVDAIRRYVESNGGHFPAELDAA 416
Query: 452 IDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN 511
+D+ A +G L VA +++G++ L D + E +G+
Sbjct: 417 VDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIK 463
Query: 512 VKMITGD-QL---AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567
MITGD L AI E G VD+ + +A
Sbjct: 464 TVMITGDNPLTAAAIAAEAG----------------------------VDDFLAEAT--- 492
Query: 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
PE K ++++ Q + MTGDG NDAPAL +AD+G+A+ T AA+ A ++V
Sbjct: 493 ---PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 91.3 bits (227), Expect = 1e-18
Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 38/170 (22%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYP 538
+ LL + DP R DS ++R G + M+TGD AI KE G
Sbjct: 640 KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG----------- 688
Query: 539 SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 598
+DE+I AGV P+ K E +KRLQ + M GDG+NDA
Sbjct: 689 -----------------IDEVI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDA 725
Query: 599 PALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
PAL +AD+GIA+ +D A + I L L + A+ SRA + MK
Sbjct: 726 PALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 77.6 bits (192), Expect = 1e-17
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 16 SVDLERIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKLEE-KKESKVLKFLGFMWNP 73
+D + +EEV E+L+ E GL+S+E A RL +GPN+L KK S +L+FL NP
Sbjct: 1 ELDWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNP 60
Query: 74 LSWVMEAAAIMAIAL 88
L +++ AAA+++ L
Sbjct: 61 LIYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 66.0 bits (162), Expect = 2e-13
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 21 RIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVM 78
+ +EEV +L E GLT E RL +GPN+L E+K +S FL +PL ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIIL 62
Query: 79 EAAAIMA 85
AAI++
Sbjct: 63 LIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 4e-08
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 22/224 (9%)
Query: 155 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEA 214
PG ++ + GD VP D + +G+ +D++ LTGE +P K D V +G+ + G +
Sbjct: 343 PGMLLRLTTGDRVPVDGEITQGEAW-LDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLF 401
Query: 215 VVIATGVHTFFGKAAHLV----DSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMY-- 268
A G HT + +V S ++G ++A+ F + + +V+ I +
Sbjct: 402 RASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV--FVPVVVVIALVSAAIWYFFG 459
Query: 269 PVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT--MAI--GSHRLSQQGAITKRMTAIEE 324
P Y LV+ + IA P L + M+I G R ++ G + + A++
Sbjct: 460 PAPQIVYT------LVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQR 513
Query: 325 MAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
+ +D L DKTGTLT K V ++ F GV++ + LAA
Sbjct: 514 ASTLDTLVFDKTGTLTEGKPQVVA--VKTFN-GVDEAQALRLAA 554
|
Length = 834 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 2e-07
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
A +PV+ + FAG PE K +I++ L++R M G+G ND AL++AD+GI
Sbjct: 63 AEFVGIPVERV------FAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGI 116
Query: 609 AV---ADATDAARSASDIVLTEPGLSVIISA 636
+ +D+VL E + +
Sbjct: 117 CTIQQEGVPERLLLTADVVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 3e-07
Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 19/123 (15%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
++GL+ L DP + E ++ G+ + ++TGD R LG+ +
Sbjct: 84 VVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALV----- 138
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
P ++ E A ++ L + M GDGVND PA K
Sbjct: 139 SADLYGLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAK 184
Query: 603 KAD 605
A
Sbjct: 185 AAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 6e-04
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 592 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 628
GD ND + A G+AVA+A + + A+D V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.001
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 557 DELIEKADGFAG------VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADI 606
+ L + G V +K + + L ++ I GDG ND +K A +
Sbjct: 130 NRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGL 189
Query: 607 GIAVADATDAARSASDIVLTEPGLSVIIS 635
GIA +A + +DI + + L+ I+
Sbjct: 190 GIAF-NAKPKLQQKADICINKKDLTDILP 217
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.003
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 573 HKYEIVKRLQERKHICG---MT-GDGVNDAPALKKADIGIAVADATDAARSASDIV 624
K +K L + I + GDG ND L+ A +G+A+ +A+ ++A+D V
Sbjct: 186 SKGTALKALAKHLGIDLEEVIAFGDGENDIEMLELAGLGVAMGNASPEVKAAADYV 241
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 37.2 bits (87), Expect = 0.004
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 377 DAIDAAIVG----MLADPKEARAGVREVHFLPFNPVDKR-TALTYIDSDGNWHRASKGAP 431
D ++A++ + D +E RA V +PFN KR + + ++ D + KGAP
Sbjct: 22 DPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAP 81
Query: 432 EQILALCN 439
E+IL C+
Sbjct: 82 ERILERCS 89
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.004
Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 38/166 (22%)
Query: 401 HFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILA-LCNCREDVRKKVHAVIDKFAERG 459
+ L FN KR ++ + DG KGA I L + V ++ ++ +A G
Sbjct: 513 NVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEG 572
Query: 460 LRSLGVARQEIPEKTKESPGAPWQ-----------------------------LVGLLPL 490
LR+L +A +E+ E+ E W L+G +
Sbjct: 573 LRTLCIAYRELSEEEYEE----WNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAI 628
Query: 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 536
D + ETI G+ + ++TGD++ ET +G +
Sbjct: 629 EDKLQEGVPETIELLRQAGIKIWVLTGDKV----ETAINIGYSCRL 670
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 573 HKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
K ++ L E I GDG+ND L+ A G+A+ +A + ++ +D V
Sbjct: 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYV 243
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 923 | |||
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.61 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.41 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.23 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.22 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.1 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.92 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.85 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.85 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.81 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.67 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.66 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.65 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.62 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.58 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.56 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.55 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.51 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.47 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.46 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.44 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.42 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.4 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.33 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.33 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.31 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.3 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.3 | |
| PLN02887 | 580 | hydrolase family protein | 98.29 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.25 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.22 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.14 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.13 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.07 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.05 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.03 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.96 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.96 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.95 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.84 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.83 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.71 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.67 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.58 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.33 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.3 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.3 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.28 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.14 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.12 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.05 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.05 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.91 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.89 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.87 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.84 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.82 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.68 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.55 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.53 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.5 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.46 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.41 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.39 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.32 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.28 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.25 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.13 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.08 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.03 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.02 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.0 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.98 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.91 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.85 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.64 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.61 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.55 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.51 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.27 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.18 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.18 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.07 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 94.93 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 94.87 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.76 | |
| PRK06769 | 173 | hypothetical protein; Validated | 94.75 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 94.67 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.54 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.4 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.34 | |
| PLN02940 | 382 | riboflavin kinase | 94.31 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 94.28 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 94.25 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.21 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.45 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 93.44 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 93.31 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 93.18 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 92.9 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 92.8 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 92.75 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 92.7 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 91.88 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 91.85 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 91.81 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 91.62 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 91.16 | |
| PLN02811 | 220 | hydrolase | 90.91 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 89.94 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 89.85 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 89.67 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 89.34 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 88.98 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 88.76 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 88.73 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 88.28 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 87.45 | |
| PLN02580 | 384 | trehalose-phosphatase | 86.67 | |
| PLN03017 | 366 | trehalose-phosphatase | 86.44 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 84.43 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 83.98 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 83.69 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 83.4 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 83.3 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 81.86 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 81.26 |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-179 Score=1455.02 Aligned_cols=905 Identities=87% Similarity=1.318 Sum_probs=887.3
Q ss_pred hHHhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 002430 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIAL 88 (923)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l 88 (923)
+++.++|..|.+..|.|+|+++|.|+..|||++|+++|+++||+|+++++|++.+++|+.+||+|+.|+|+++|++++.+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeec
Q 002430 89 ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVP 168 (923)
Q Consensus 89 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IP 168 (923)
.++++.+++|.|+++|++++++|+.++|+||++++++.++|++.++++++|+|||+|.++++++||||||+.++.||+||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEecCCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccCCCCcHHHHHHHH
Q 002430 169 ADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248 (923)
Q Consensus 169 aD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~~~~~~~~~~~~i 248 (923)
||+||++|+.++||+|+|||||.||.|++||.+|+||+|++|++.++|++||.+|++||.+++++++++.+|||+.++.|
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCc
Q 002430 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 328 (923)
Q Consensus 249 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v 328 (923)
+++|++++++.+++.+.++|+.+.+.++..+.+.+++++..||.+||.++++++++|+.||+++|+++|+++++|+|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCC
Q 002430 329 DVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPV 408 (923)
Q Consensus 329 ~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~ 408 (923)
|++|+|||||||.|+++|.+..++.+..+.++++++..|+++++.+++|++|.|+++++.||++++.+|+.++++||||.
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999888788899999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEe
Q 002430 409 DKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488 (923)
Q Consensus 409 ~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i 488 (923)
+||.+..+.+++|+++.++||||+.|+++|+.++++++.+++.+++|+++|+|.|++|++..+++..+..+.+|+|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 489 ~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
.+.||||+|+.++|.+....|++|+|+|||+...+++++|++|+.+|+|++..+.|...++.+.+.++++++++++.||.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHH
Q 002430 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~ 648 (923)
+.|+||+++|+.||++||+|+|+|||+||+||||+||+|||+.+++|+|+.+||+||+++++|.|+.++..+|.+|+||+
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHhcccccccccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 002430 649 NYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728 (923)
Q Consensus 649 ~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~ 728 (923)
+|.+|+++.++.+++.++...+.|.+.|+|++++++.+++|++.|++++|+++|+|.|++|+++++|..++++|.|+++.
T Consensus 648 nytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~~ 727 (942)
T KOG0205|consen 648 NYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAIM 727 (942)
T ss_pred hheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccccccCccccCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHH
Q 002430 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAV 808 (923)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (923)
+..+||..+.+.|++..||+.....+..+.....|+++++.+++++|++|+++|+|.++|+++++.+++.++++++++++
T Consensus 728 tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatliav 807 (942)
T KOG0205|consen 728 TVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIAV 807 (942)
T ss_pred HHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888888889999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhccccccccccCChhHHHHHHHHHhhhhh
Q 002430 809 YANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLH 888 (923)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 888 (923)
|++|.+.+..++.|.|..++|++++..+++.++.|+..||..++++|+..++.+.++.++++|++++|.++|+.+||++|
T Consensus 808 ya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~~~qrt~~ 887 (942)
T KOG0205|consen 808 YANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWALAQRTLH 887 (942)
T ss_pred HheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHHHhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccccCCcchhhhhHHHHHHHhhhhhcC
Q 002430 889 GLQPPETNGIFSDKNSYRELSEIAEQAKRRAEVAR 923 (923)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (923)
+.+.++. ++++++++|++||+|+||
T Consensus 888 ~lq~~~~----------~~~~~~a~~~~~~ae~~r 912 (942)
T KOG0205|consen 888 GLQPPEG----------RELSEIAEEAKRRAEIAR 912 (942)
T ss_pred ccCCCcc----------chhhHHHHHHhhhhhhhh
Confidence 9998862 589999999999999986
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-145 Score=1227.42 Aligned_cols=822 Identities=29% Similarity=0.423 Sum_probs=680.2
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCC
Q 002430 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRD 95 (923)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~ 95 (923)
+.|..+.+|++..+.++ ++|||++|+.+|+++||+|+++... .+.|+++++||.||+..+|+++|++|+++.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 46778999999999998 6799999999999999999998654 899999999999999999999999999997
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEe
Q 002430 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (923)
Q Consensus 96 ~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~ 175 (923)
.|.++++|.+++++|++++++||||++|++++|+++.|+.++|+|+|+.+.++++||||||||.|+-||+||||.||++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEeccccCCCcceecCC--------------CCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-CCCc
Q 002430 176 GDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGH 240 (923)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~ 240 (923)
..++.||||+|||||.||.|.. .|++|+||.|..|.++|+|+.||.+|++|++.+.++..+ .++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9889999999999999999954 257999999999999999999999999999999998874 6999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHhc---c-c---cchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhc
Q 002430 241 FQKVLTAIGNFCICSIAVGIVAEIII--MYPV---Q-H---RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 311 (923)
Q Consensus 241 ~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~---~-~---~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~ 311 (923)
+|+.++.+++.+.-.+.+..+..+++ .|+. . + ..+.+.+..++++.+++||+|||+++++++++|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999988653332222222322 2221 1 2 345567788899999999999999999999999999999
Q ss_pred CCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecc-----------cCC------------------ChH-
Q 002430 312 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA-----------KGV------------------EKE- 361 (923)
Q Consensus 312 ~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-----------~~~------------------~~~- 361 (923)
++++||++.++|+||.+++||||||||||+|+|++.++++.... .++ ..+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999997752110 001 111
Q ss_pred --HHHHHHHHHccc------c-----CcchHHHHHHHhcC-----Chhh--------------hhcCceeEEeecCCCCC
Q 002430 362 --HVILLAARASRT------E-----NQDAIDAAIVGMLA-----DPKE--------------ARAGVREVHFLPFNPVD 409 (923)
Q Consensus 362 --~~l~~a~~~~~~------~-----~~~~~~~ai~~~~~-----~~~~--------------~~~~~~~l~~~~F~s~~ 409 (923)
+++..++.|... . .++|+|.|+...+. +... ....++...++||++++
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 223333333211 1 34688888765541 1110 11223455899999999
Q ss_pred cceEEEEEecCCc--EEEEEcCcHHHHHHhccC------------ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCC--
Q 002430 410 KRTALTYIDSDGN--WHRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-- 473 (923)
Q Consensus 410 k~~sv~~~~~~g~--~~~~~KGa~e~il~~~~~------------~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~-- 473 (923)
|+|++.+.+..|+ +..|+|||+|.|+++|+. ++..++.+.+...+|+++|+|+|++|+++.+..
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999876664 789999999999999953 345688999999999999999999999977631
Q ss_pred ---------CCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCC--CCCCcc
Q 002430 474 ---------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--YPSSSL 542 (923)
Q Consensus 474 ---------~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~--~~~~~l 542 (923)
.+...|.+|+|+|++++.||||++++++|+.|+++||+|+|||||+.+||.+|||++|+..+. .....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 244678999999999999999999999999999999999999999999999999999997543 234567
Q ss_pred cCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-cchHHHhhcc
Q 002430 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSAS 621 (923)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~gtd~A~~aA 621 (923)
+|.+.+ .++++++++.+.+..+|||++|+||.+||++||++|++|||||||+||+||||+|||||||| +|||+||+||
T Consensus 636 TG~efD-~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 636 TGSEFD-DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred chhhhh-cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 777665 88999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCcHHHHHHHHHHhccc-ccccccCC
Q 002430 622 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-IALIWKFDFSPFMVLIIAILNDGT-IMTISKDR 699 (923)
Q Consensus 622 Divl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~-~~~~~~~~~~~~~il~i~l~~d~~-~~~l~~~~ 699 (923)
|+||.||||++|+.||++||.+|+|||+|+.|.++.|++.+..+++ ..+.++.|+.|+|+||+|+++|++ +++|++++
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep 794 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEP 794 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCC
Confidence 9999999999999999999999999999999999999976665554 556789999999999999999987 69999999
Q ss_pred CCCC---CCCCchh----HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCcccc----------CC------CHH
Q 002430 700 VKPS---PQPDSWK----LKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSL----------RT------RPD 756 (923)
Q Consensus 700 ~~~~---~~p~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------~~------~~~ 756 (923)
+++. ++|++++ ...++...+..|+++.+.++..|++.+... .+...++.. .. ...
T Consensus 795 ~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~--~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~ 872 (972)
T KOG0202|consen 795 VDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA--DGKVTYRQLAHYNSCCRDFYGSRCAVFEDM 872 (972)
T ss_pred CChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC--CCCcChhhhcchhhhcccccccchhhhccc
Confidence 8775 2233322 345666667779999998886655443211 111111000 00 001
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCcccc---hhHHHHHHHHHHHHHHHHHHHhhc--ccccccccchhhHHHHHHHH
Q 002430 757 EMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQLVATFIAVYAN--WSFARIEGCGWGWAGVIWLY 831 (923)
Q Consensus 757 ~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 831 (923)
...|+.|..+++...++.+++|+...+.+.. .+.|+++++.++.+... ..+|.+ -..++..+++|.-|++++.+
T Consensus 873 ~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f-~ilYvp~l~~iFq~~~l~~~ew~~vl~~ 951 (972)
T KOG0202|consen 873 CPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHF-LVLYVPPLQRIFQTEPLSLAEWLLVLAI 951 (972)
T ss_pred ccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhh-eEEEechhhhhheecCCcHHHHHHHHHH
Confidence 1237788888999999999999987553322 23388888888876654 446654 12345777777777777899
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 002430 832 SLVTYFPLDILKFGIRYIL 850 (923)
Q Consensus 832 ~~~~~~~~~~~K~~~~~~~ 850 (923)
+..+++++|++|++.|++.
T Consensus 952 s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 952 SSPVIIVDEILKFIARNYF 970 (972)
T ss_pred hhhhhhHHHHHHHHHHhcc
Confidence 9999999999999998765
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-135 Score=1232.77 Aligned_cols=752 Identities=60% Similarity=0.945 Sum_probs=675.0
Q ss_pred CCCHHHHHHHHhhcCCCccCcccccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHH
Q 002430 37 GLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISF 116 (923)
Q Consensus 37 GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 116 (923)
|||++||++|+++||+|++++++++.|+.|+++|++|++|+|+++++++++++ +|.++++|++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999888888999999999999999999999999986 89999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecC
Q 002430 117 IEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196 (923)
Q Consensus 117 ~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~ 196 (923)
+||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|+
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999977999999999999999999
Q ss_pred CCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch
Q 002430 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275 (923)
Q Consensus 197 ~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~ 275 (923)
++|.+|+||.|.+|++.++|++||.+|.+||+++++++++ +++++|+.+++++.+++..+++.+++.+++.+...+.++
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998875 678999999999988766554434333333333256788
Q ss_pred HHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecc
Q 002430 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA 355 (923)
Q Consensus 276 ~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 355 (923)
.+++..++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.++.. ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999998764 22
Q ss_pred cCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEEEEEecC-CcEEEEEcCcHHHH
Q 002430 356 KGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQI 434 (923)
Q Consensus 356 ~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~-g~~~~~~KGa~e~i 434 (923)
.+.+.++++.+++.++....+||+|.|++.++.+....+..++.++++||++.+|+|++++.+.+ |+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 23667788888887765566799999999987665545567888999999999999999887654 77888999999999
Q ss_pred HHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEE
Q 002430 435 LALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKM 514 (923)
Q Consensus 435 l~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~m 514 (923)
+++|++.++.++++++.+++++.+|+|++++|+++ .|++|+|+|+++++||||||++++|++||++||+|+|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998776777888899999999999999999973 2678999999999999999999999999999999999
Q ss_pred EccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCC
Q 002430 515 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594 (923)
Q Consensus 515 lTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG 594 (923)
+||||+.||.++|+++||.++.+..+.+....+.+.++++++++.+++.++|||++|+||+++|+.||++|++|+|||||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 99999999999999999976544333333333344678889999999999999999999999999999999999999999
Q ss_pred ccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 002430 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKF 674 (923)
Q Consensus 595 ~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~ 674 (923)
+||+||||+|||||||++|+|+||++||+||++|||++|+.++++||++|+||+||+.|.++.|+..++.+++..+++++
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~ 623 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF 623 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888777777767778
Q ss_pred CCcHHHHHHHHHHhcccccccccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCccccCCC
Q 002430 675 DFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTR 754 (923)
Q Consensus 675 ~~~~~~il~i~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 754 (923)
+++|+|++|+++++|++.+++++|+++|+++|++|+..+++..+++.|.++++.++.+||+.+...++...++. ...
T Consensus 624 ~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 700 (755)
T TIGR01647 624 YFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL---QLL 700 (755)
T ss_pred chhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc---ccc
Confidence 89999999999999998999999999999999999999999999999999999999888776642222111111 113
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHH
Q 002430 755 PDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAV 808 (923)
Q Consensus 755 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (923)
..+.+|++|+.+++.+.+++|++|+++.+|.++|++++++++++.+++.++++.
T Consensus 701 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 701 HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhh
Confidence 457889999999999999999999999999999999999999998888777754
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-133 Score=1234.82 Aligned_cols=806 Identities=27% Similarity=0.408 Sum_probs=678.1
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-cHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCC
Q 002430 18 DLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96 (923)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~ 96 (923)
..+..+.+++++.|+++.+|||++||++|+++||+|+++.+++ ++|+.|+++|++|++++++++++++++++
T Consensus 48 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------- 120 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------- 120 (902)
T ss_pred HHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------
Confidence 3567899999999999999999999999999999999998774 68899999999999999999999999986
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC------CeEEEEeCCCCCCCcEEEEeCCCeeccc
Q 002430 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGDIVPAD 170 (923)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rd------g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD 170 (923)
+|.++++|+++++++..++++||+|+++++++|+++.+++++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 121 ~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 121 DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 8999999999999999999999999999999999999999999999 7899999999999999999999999999
Q ss_pred eEEEecCCeEEEeccccCCCcceecCCCC-------------cccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-C
Q 002430 171 ARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-N 236 (923)
Q Consensus 171 ~~ll~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~ 236 (923)
|+|++|+++.||||+|||||.||.|.+++ ++|+||.|.+|++.++|++||.+|.+||+++++++. .
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999999874 799999999999999999999999999999999876 5
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCcee
Q 002430 237 QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316 (923)
Q Consensus 237 ~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilv 316 (923)
+++++|+.+++++++++.+.++...+.+++ +.+...+|.+++..++++++++|||+||++++++++.|+.+|+|+|++|
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i-~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilV 359 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLI-NGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIV 359 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhH-HHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 789999999999887654443323222222 2233457888999999999999999999999999999999999999999
Q ss_pred ccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHcccc--CcchHHHHHHHhcCCh--hh
Q 002430 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE--NQDAIDAAIVGMLADP--KE 392 (923)
Q Consensus 317 k~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~ 392 (923)
|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.++... .+||+|.|++.++... ..
T Consensus 360 k~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~ 436 (902)
T PRK10517 360 KRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARS 436 (902)
T ss_pred ecchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhh
Confidence 99999999999999999999999999999987631 12345567777776655432 3699999999876432 22
Q ss_pred hhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC----------ChhHHHHHHHHHHHHHHcCCeE
Q 002430 393 ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRS 462 (923)
Q Consensus 393 ~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~ 462 (923)
....++.++++||+|.+|+|++++.+.++.+.+++||+||.++++|+. +++.++.+.+..++++++|+|+
T Consensus 437 ~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 516 (902)
T PRK10517 437 LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRV 516 (902)
T ss_pred hhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345688899999999999999998877777889999999999999963 2234567778889999999999
Q ss_pred EEEEeeecCCCCC---CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCC
Q 002430 463 LGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 539 (923)
Q Consensus 463 l~~A~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~ 539 (923)
+++||++++..+. ...|++++|+|+++|+||||||++++|++|+++||+|+|+||||+.||.+||+++||.. .
T Consensus 517 lavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~ 592 (902)
T PRK10517 517 VAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----G 592 (902)
T ss_pred EEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----c
Confidence 9999998764322 12377999999999999999999999999999999999999999999999999999953 3
Q ss_pred CcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhh
Q 002430 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARS 619 (923)
Q Consensus 540 ~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~ 619 (923)
.+++|.+.+ .++++++++.+++.+||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|+|+||+
T Consensus 593 ~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAke 671 (902)
T PRK10517 593 EVLIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIARE 671 (902)
T ss_pred CceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHH
Confidence 466666554 7889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcHHHHHHHHHHhcccccccccC
Q 002430 620 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGTIMTISKD 698 (923)
Q Consensus 620 aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~-~~~~~~~il~i~l~~d~~~~~l~~~ 698 (923)
+||+||++|||++|+.++++||++|+||+|++.|.++.|+..++.+++..++++ +|++|+|++|+|+++|.+.+++++|
T Consensus 672 aADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d 751 (902)
T PRK10517 672 AADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFD 751 (902)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCC
Confidence 999999999999999999999999999999999999999988887777666666 6999999999999999878999999
Q ss_pred CCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCccccCCCHHHHHHHHHHHHHHHHHHHhhh
Q 002430 699 RVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFV 776 (923)
Q Consensus 699 ~~~~~~--~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~ 776 (923)
+++++. +|++|+...+...+++.|.+.+++++..|++++.. ++... .......++..|+.+++++.+++|+
T Consensus 752 ~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~F~~~~~~q~~~~~~ 824 (902)
T PRK10517 752 NVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT-PETQTLFQSGWFVVGLLSQTLIVHM 824 (902)
T ss_pred CCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc-hhhHhHHHHHHHHHHHHHHHHHHHh
Confidence 998874 67888888888888888999888887766654321 11110 0011234566799999999999999
Q ss_pred hccCC-CCcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccch--hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 777 TRSRS-WSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCG--WGWAGVIWLYSLVTYFPLDILKFGIRY 848 (923)
Q Consensus 777 ~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~K~~~~~ 848 (923)
+|+++ ++|.+++.+..+++.++.+++..++++..-.+++++.+++ +..|+.+++++.. ++.++.|.+..+
T Consensus 825 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~~ 897 (902)
T PRK10517 825 IRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYSR 897 (902)
T ss_pred hccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 99987 5555555555554444444444333311112344566666 3444443333333 567877765433
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-133 Score=1247.48 Aligned_cols=819 Identities=26% Similarity=0.390 Sum_probs=671.2
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCC
Q 002430 15 ESVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGG 92 (923)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~ 92 (923)
|-.|||..+.+|+.+.|+++ .+|||++||++|+++||+|+++.++ .++|+.|++||++|+.++|+++++++++++
T Consensus 3 ~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--- 79 (1053)
T TIGR01523 3 EFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--- 79 (1053)
T ss_pred CCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh---
Confidence 45689999999999999998 5899999999999999999999875 688999999999999999999999999986
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceE
Q 002430 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (923)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ 172 (923)
+|.++++|++++++|+.++++||+|+++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+
T Consensus 80 ----~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 80 ----DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ----hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEeccccCCCcceecCCC---------------CcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-
Q 002430 173 LLEGDPLKIDQSALTGESLPVTKNPY---------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN- 236 (923)
Q Consensus 173 ll~g~~~~Vdes~LTGEs~pv~K~~~---------------~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~- 236 (923)
|++++++.||||+|||||.||.|.+. |++|+||.|.+|++.++|++||.+|++|||++++++.+
T Consensus 156 Li~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~ 235 (1053)
T TIGR01523 156 LIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGG 235 (1053)
T ss_pred EEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhh
Confidence 99998999999999999999999642 57899999999999999999999999999999886431
Q ss_pred -----------------------------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHH
Q 002430 237 -----------------------------------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDN 281 (923)
Q Consensus 237 -----------------------------------~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (923)
.++|+|+.++++++++.++.+++.++.++..+ . ..+...+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~--~-~~~~~~~~~ 312 (1053)
T TIGR01523 236 LFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK--F-DVDKEVAIY 312 (1053)
T ss_pred ccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh--h-hhhHHHHHH
Confidence 13899999999998755443332222222111 1 112466778
Q ss_pred HHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeee---c----
Q 002430 282 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV---F---- 354 (923)
Q Consensus 282 ~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~---~---- 354 (923)
+++++++++|++||+++++++++|++||+++|++||+++++|+||++++||+|||||||+|+|+|.+++... +
T Consensus 313 av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~ 392 (1053)
T TIGR01523 313 AICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDN 392 (1053)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecC
Confidence 899999999999999999999999999999999999999999999999999999999999999999876421 0
Q ss_pred -ccCC-----------------------------------------C-------hHHHHHHHHHHccc------------
Q 002430 355 -AKGV-----------------------------------------E-------KEHVILLAARASRT------------ 373 (923)
Q Consensus 355 -~~~~-----------------------------------------~-------~~~~l~~a~~~~~~------------ 373 (923)
..++ . ..+++..++.|+..
T Consensus 393 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~ 472 (1053)
T TIGR01523 393 SDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK 472 (1053)
T ss_pred CCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee
Confidence 0000 0 01244444444321
Q ss_pred cCcchHHHHHHHhcCCh----------hhh-------------------hcCceeEEeecCCCCCcceEEEEEecCC-cE
Q 002430 374 ENQDAIDAAIVGMLADP----------KEA-------------------RAGVREVHFLPFNPVDKRTALTYIDSDG-NW 423 (923)
Q Consensus 374 ~~~~~~~~ai~~~~~~~----------~~~-------------------~~~~~~l~~~~F~s~~k~~sv~~~~~~g-~~ 423 (923)
..+||+|.|++.++... .+. ...|++++.+||+|.+|||++++++.++ ++
T Consensus 473 ~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~ 552 (1053)
T TIGR01523 473 AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552 (1053)
T ss_pred eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEE
Confidence 12599999998775210 111 2347889999999999999999987654 47
Q ss_pred EEEEcCcHHHHHHhccC------------ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCC------------CCCCC
Q 002430 424 HRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT------------KESPG 479 (923)
Q Consensus 424 ~~~~KGa~e~il~~~~~------------~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~------------~~~~e 479 (923)
++++|||||.|+++|+. +++.++.+.+.+++|+++|+|||++|||.+++.+ ++..|
T Consensus 553 ~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e 632 (1053)
T TIGR01523 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAE 632 (1053)
T ss_pred EEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhc
Confidence 89999999999999963 2344677888999999999999999999886432 23468
Q ss_pred CCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC--------CCCcccCccccccc
Q 002430 480 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--------PSSSLLGQDKDASI 551 (923)
Q Consensus 480 ~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~--------~~~~l~~~~~~~~~ 551 (923)
++|+|+|+++++||||+|++++|++||++||+|+|+||||+.||.+||+++||.++.. ...+++|.+.+ .+
T Consensus 633 ~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~-~l 711 (1053)
T TIGR01523 633 SDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD-AL 711 (1053)
T ss_pred cCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh-hc
Confidence 8999999999999999999999999999999999999999999999999999964310 12355565443 67
Q ss_pred CcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-cchHHHhhccCEEecCCCc
Q 002430 552 AALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGL 630 (923)
Q Consensus 552 ~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~gtd~A~~aADivl~~~~~ 630 (923)
+++++++++++..||||++|+||.++|+.+|++|++|+|||||+||+||||+|||||||| +|+|+|+++||++|++|+|
T Consensus 712 ~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred CHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCH
Confidence 788899999999999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCCcHHHHHHHHHHhccc-ccccccCCCCCC
Q 002430 631 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIW------KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS 703 (923)
Q Consensus 631 ~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~------~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~~ 703 (923)
++|+.++++||++|+|++|++.|.+++|+..++.++++.++. ++||+|+|++|+|+++|.+ ++++++|++++.
T Consensus 792 ~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~ 871 (1053)
T TIGR01523 792 ASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPD 871 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChh
Confidence 999999999999999999999999999998877776655542 3689999999999999965 799999987654
Q ss_pred -----CCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--------ccCccccCCCHHHHHHHHHHHHHH
Q 002430 704 -----PQP--DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD--------AFGVRSLRTRPDEMMAALYLQVSI 768 (923)
Q Consensus 704 -----~~p--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~~t~~f~~~~~ 768 (923)
|++ ++...++++...+++|+++++.+++.|++.+.. +..+ .++.+ . ....+.+|+.|.++++
T Consensus 872 ~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~-~-~~~~~a~t~~f~~l~~ 948 (1053)
T TIGR01523 872 LMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAHYHAG-C-NDVFKARSAAFATMTF 948 (1053)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccccccccccccc-c-cchhhhHHHHHHHHHH
Confidence 222 122234566667788999999888776654321 1000 01100 0 1234678999999999
Q ss_pred HHHHHhhhhccCCCCccc------------------chhHHHHHHHHHHHHHHHHHHHhhc-c--cccccccchhhHHHH
Q 002430 769 ISQALIFVTRSRSWSFIE------------------RPGLLLATAFVIAQLVATFIAVYAN-W--SFARIEGCGWGWAGV 827 (923)
Q Consensus 769 ~~~~~~~~~r~~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~ 827 (923)
++.+++|++|+.+.+.+. ..+.+++++++++.++.. +.+|.+ . .++++.+++|.|++
T Consensus 949 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~-~~~~~p~~~~~~f~~~~l~~~w~~- 1026 (1053)
T TIGR01523 949 CALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAF-PTIYIPVINDDVFKHKPIGAEWGL- 1026 (1053)
T ss_pred HHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHH-HHHhhhhhhhhhhccCCcchHHHH-
Confidence 999999999997632111 134467777776666543 334543 2 25567777786655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 002430 828 IWLYSLVTYFPLDILKFGIRYI 849 (923)
Q Consensus 828 ~~~~~~~~~~~~~~~K~~~~~~ 849 (923)
+++++++.++..+++|+++|++
T Consensus 1027 ~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 1027 AAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 5778888899999999887655
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-133 Score=1231.14 Aligned_cols=814 Identities=26% Similarity=0.411 Sum_probs=677.6
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHhcC----C
Q 002430 18 DLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG----G 92 (923)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~----~ 92 (923)
..|..+.+++++.|+++.+|||++||++|+++||+|++++++ .++|+.|++||++|+.++|+++++++++++.. .
T Consensus 26 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~ 105 (903)
T PRK15122 26 REAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRR 105 (903)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccC
Confidence 457889999999999999999999999999999999999776 56889999999999999999999999997521 1
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC------CeEEEEeCCCCCCCcEEEEeCCCe
Q 002430 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGDI 166 (923)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rd------g~~~~i~~~~Lv~GDiV~l~~Gd~ 166 (923)
+...+|.++++|++++++++.++++||++++++.++|+++.+++++|+|| |++++|+++||||||+|.|++||+
T Consensus 106 ~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~ 185 (903)
T PRK15122 106 GEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDM 185 (903)
T ss_pred CccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence 22358999999999999999999999999999999999999999999999 489999999999999999999999
Q ss_pred eccceEEEecCCeEEEeccccCCCcceecCC-----------------------CCcccccceeecCeEEEEEEEecchh
Q 002430 167 VPADARLLEGDPLKIDQSALTGESLPVTKNP-----------------------YDEVFSGSTCKQGEIEAVVIATGVHT 223 (923)
Q Consensus 167 IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~-----------------------~~~v~~Gt~v~~G~~~~~V~~tG~~T 223 (923)
|||||+|++|+++.||||+|||||.|+.|.+ +|++|+||.|.+|++.++|++||.+|
T Consensus 186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 9999999999889999999999999999975 26899999999999999999999999
Q ss_pred hHHhHHhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHH
Q 002430 224 FFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 303 (923)
Q Consensus 224 ~~g~i~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~ 303 (923)
++||+++++.+.+.++++|+.++++++++..+..+++.+.+++ ......+|.+++..++++++++|||+||++++++++
T Consensus 266 ~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~-~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La 344 (903)
T PRK15122 266 YFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLI-NGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLA 344 (903)
T ss_pred HhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 9999999998766778999999998876543332222221122 222345788899999999999999999999999999
Q ss_pred HHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccc--cCcchHHH
Q 002430 304 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDA 381 (923)
Q Consensus 304 ~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~~ 381 (923)
.|+.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++.. ..+||+|.
T Consensus 345 ~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~ 421 (903)
T PRK15122 345 KGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQ 421 (903)
T ss_pred HHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHH
Confidence 999999999999999999999999999999999999999999988652 2234456677776654332 23599999
Q ss_pred HHHHhcCCh--hhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC----------ChhHHHHHH
Q 002430 382 AIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVH 449 (923)
Q Consensus 382 ai~~~~~~~--~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~ 449 (923)
|++.++... ......++.++++||++.+|+|++++++.+|+++.++|||||.++++|+. +++.++++.
T Consensus 422 All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 501 (903)
T PRK15122 422 AVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLL 501 (903)
T ss_pred HHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 999887432 12234678899999999999999999877788899999999999999963 233456778
Q ss_pred HHHHHHHHcCCeEEEEEeeecCCCCC-----CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHH
Q 002430 450 AVIDKFAERGLRSLGVARQEIPEKTK-----ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK 524 (923)
Q Consensus 450 ~~i~~~a~~GlR~l~~A~~~~~~~~~-----~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~ 524 (923)
+.+++++.+|+|++++||++++..+. +..|++++|+|+++|+||||||++++|++||++||+|+|+||||+.||.
T Consensus 502 ~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~ 581 (903)
T PRK15122 502 ALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTA 581 (903)
T ss_pred HHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 88899999999999999998765321 2357899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcC
Q 002430 525 ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (923)
Q Consensus 525 ~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~A 604 (923)
+||+++||.. ..+++|.+.+ .++++++.+.+++.+||||++|+||+++|+.||++|++|+|||||+||+||||+|
T Consensus 582 aIA~~lGI~~----~~vi~G~el~-~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~A 656 (903)
T PRK15122 582 KICREVGLEP----GEPLLGTEIE-AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDA 656 (903)
T ss_pred HHHHHcCCCC----CCccchHhhh-hCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhC
Confidence 9999999953 3456666554 7889999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcHHHHHH
Q 002430 605 DIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLI 683 (923)
Q Consensus 605 dVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~-~~~~~~~il~ 683 (923)
|||||||+|||+||++||+||++|||++|+.++++||++|+||+|++.|.++.|+..++.+++..++.+ +|++|+|++|
T Consensus 657 DVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~ 736 (903)
T PRK15122 657 DVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLL 736 (903)
T ss_pred CEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987776666555555 7899999999
Q ss_pred HHHHhcccccccccCCCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCccccCCCHHHHHHH
Q 002430 684 IAILNDGTIMTISKDRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAA 761 (923)
Q Consensus 684 i~l~~d~~~~~l~~~~~~~~~--~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~ 761 (923)
+|+++|.+.+++++|+++++. +|++|+.+.+-..++..|.+.+++++..|++.+.. + . .+. . ......+|.
T Consensus 737 ~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~-~--~~~--~-~~~~~~~t~ 809 (903)
T PRK15122 737 QNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV-F-A--ANS--V-EMQALFQSG 809 (903)
T ss_pred HHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH-h-c--cCc--H-hhhhhhHHH
Confidence 999999888999999998764 67777766555555567777777776655543211 0 0 010 0 001134578
Q ss_pred HHHHHHHHHHHHhhhhccCC-CCcccchhHHHHHHHHHHHHHHHHHHH-hhcccccccccchhhHHHHHHHHHHHHHHHH
Q 002430 762 LYLQVSIISQALIFVTRSRS-WSFIERPGLLLATAFVIAQLVATFIAV-YANWSFARIEGCGWGWAGVIWLYSLVTYFPL 839 (923)
Q Consensus 762 ~f~~~~~~~~~~~~~~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (923)
.|+.+++++.+++|++|+++ ++|.+++.+..+++.++.+++.+++++ .. -.++.+.++++..|++++.++++++++.
T Consensus 810 ~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~ 888 (903)
T PRK15122 810 WFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPL-GAMVGLEPLPWSYFPWLAATLLGYCLVA 888 (903)
T ss_pred HHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHH-HHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999987 444444434434433333333333322 01 1234577778887777788888888888
Q ss_pred HHHHHHHHH
Q 002430 840 DILKFGIRY 848 (923)
Q Consensus 840 ~~~K~~~~~ 848 (923)
++.|.+.++
T Consensus 889 e~~k~~~~r 897 (903)
T PRK15122 889 QGMKRFYIR 897 (903)
T ss_pred HHHHHHHhh
Confidence 988855443
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-134 Score=1239.18 Aligned_cols=780 Identities=32% Similarity=0.508 Sum_probs=662.1
Q ss_pred cccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHhc
Q 002430 15 ESVDLERIPIE--EVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALAN 90 (923)
Q Consensus 15 ~~~~~~~~~~~--~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~ 90 (923)
....||..+.+ ++...+.++ .+|||++|+.+|+++||+|++++.+ .+.|.+|+.||++|+.++|+++++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~- 97 (917)
T COG0474 19 TSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG- 97 (917)
T ss_pred CcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 35578888888 999999887 6799999999999999999999665 688999999999999999999999999987
Q ss_pred CCCCCCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCe
Q 002430 91 GGGRDPDW----QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDI 166 (923)
Q Consensus 91 ~~~~~~~~----~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~ 166 (923)
.| .++..|+.++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+
T Consensus 98 ------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~ 171 (917)
T COG0474 98 ------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDV 171 (917)
T ss_pred ------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCc
Confidence 66 56678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccceEEEecCCeEEEeccccCCCcceecCC--------------CCcccccceeecCeEEEEEEEecchhhHHhHHhhh
Q 002430 167 VPADARLLEGDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232 (923)
Q Consensus 167 IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~ 232 (923)
||||++|+++++++||||+|||||+||.|.+ .|++|+||.+.+|++.++|++||.+|++|+++.++
T Consensus 172 vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~ 251 (917)
T COG0474 172 VPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLL 251 (917)
T ss_pred cccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhh
Confidence 9999999999888999999999999999963 47899999999999999999999999999999999
Q ss_pred hcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhc
Q 002430 233 DST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 311 (923)
Q Consensus 233 ~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~ 311 (923)
... ...+++|+.+++++.+++.+.+++.++.++..++..+..|.+.+..++++++++||++||+++++++++|+++|++
T Consensus 252 ~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 252 PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 988 6899999999999988766555544444444433323448899999999999999999999999999999999999
Q ss_pred CCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCC------h---HHHHHHHHHHcc-cc-------
Q 002430 312 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE------K---EHVILLAARASR-TE------- 374 (923)
Q Consensus 312 ~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~---~~~l~~a~~~~~-~~------- 374 (923)
+++++|+++++|+||++++||||||||||+|+|+|.+++........+ . ..++..++.|+. ..
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~ 411 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQ 411 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCcee
Confidence 999999999999999999999999999999999999998752011111 1 123444444442 22
Q ss_pred CcchHHHHHHHhcC------ChhhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC-------C
Q 002430 375 NQDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-------R 441 (923)
Q Consensus 375 ~~~~~~~ai~~~~~------~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~-------~ 441 (923)
.+||+|.|++..+. +.......+++++++||+|+||||++++++.+|++++++|||||.|+++|+. .
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 46999999998874 3444566678899999999999999999977788999999999999999973 4
Q ss_pred hhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC----CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEcc
Q 002430 442 EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK----ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITG 517 (923)
Q Consensus 442 ~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~----~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTG 517 (923)
++.++.+++..++|+++|||++++|||..+..+. +..|++|+|+|+++|+||||+|++++|+.|++|||+|||+||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 5667899999999999999999999998765543 578999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccC
Q 002430 518 DQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVND 597 (923)
Q Consensus 518 D~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~ND 597 (923)
||+.||++||++||+..+.....+++|.+.+ .++++++.+.+++.+||||+||+||.+||+.||++||+|+|||||+||
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~-~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELD-ALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhh-hcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 9999999999999987653322355666554 677889999999999999999999999999999999999999999999
Q ss_pred hHhhhcCCeeeEec-cchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-C
Q 002430 598 APALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL-IWK-F 674 (923)
Q Consensus 598 apaLk~AdVGIamg-~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~-~~~-~ 674 (923)
|||||+|||||||+ +|+|+||+|||+++++|+|++|+.+|+|||++|+|++|++.|.+++|+..++.++++.+ ..+ +
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999997 89999999999999999999999999999999999999999999999987766666544 344 6
Q ss_pred CCcHHHHHHHHHHhccc-ccccccCCCC-----CC-CCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 002430 675 DFSPFMVLIIAILNDGT-IMTISKDRVK-----PS-PQPDS--WKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDA 745 (923)
Q Consensus 675 ~~~~~~il~i~l~~d~~-~~~l~~~~~~-----~~-~~p~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 745 (923)
||+|+|++|+|+++|++ +++++.++++ ++ ++|.+ |+.+.++.+.+..|...++++++.|.+.+.... ...
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~-~~~ 809 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFI-ANT 809 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccc
Confidence 89999999999999986 6788776532 22 23555 666666666777788888888777666553211 111
Q ss_pred cCccccCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccc---hhHHHHHHHHHHHHHHHHH
Q 002430 746 FGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQLVATFI 806 (923)
Q Consensus 746 ~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~ 806 (923)
.+... .....+++.|+.+++++.++.+..|+.+.+|++. +++.+++++++..++..+.
T Consensus 810 ~~~~~---~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~ 870 (917)
T COG0474 810 LGLDL---FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLI 870 (917)
T ss_pred cchhh---HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHH
Confidence 11100 1556789999999999999999999987555443 4556666666555554444
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-132 Score=1221.35 Aligned_cols=807 Identities=25% Similarity=0.390 Sum_probs=671.5
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCC
Q 002430 18 DLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96 (923)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~ 96 (923)
+.|+.+.+++++.|+++.+|||++||++|+++||+|++++++ .++|+.|+++|++|++++++++++++++++
T Consensus 14 ~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------- 86 (867)
T TIGR01524 14 KESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------- 86 (867)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh-------
Confidence 456889999999999999999999999999999999998876 568899999999999999999999999986
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEe------CCeEEEEeCCCCCCCcEEEEeCCCeeccc
Q 002430 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPAD 170 (923)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R------dg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD 170 (923)
+|.++++|++++++++.++++||+|++++.++|+++.+++++|+| ||++++|+++||||||+|.|++||+||||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 899999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred eEEEecCCeEEEeccccCCCcceecCCCC-------------cccccceeecCeEEEEEEEecchhhHHhHHhhhhccCC
Q 002430 171 ARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ 237 (923)
Q Consensus 171 ~~ll~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~~ 237 (923)
|+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|.+||+++++++.++
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 246 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRG 246 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCC
Confidence 99999988999999999999999998874 69999999999999999999999999999999988667
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceec
Q 002430 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (923)
Q Consensus 238 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 317 (923)
++++|+.++++++++..+.++...+.++ .+.+...+|.+++..++++++++|||+||++++++++.|+++|+|+|+++|
T Consensus 247 ~t~lq~~~~~i~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk 325 (867)
T TIGR01524 247 QTAFDKGVKSVSKLLIRFMLVMVPVVLM-INGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVK 325 (867)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhee-hHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEc
Confidence 7899999999998865544432322222 222334578889999999999999999999999999999999999999999
Q ss_pred cCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHcccc--CcchHHHHHHHhcCCh--hhh
Q 002430 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE--NQDAIDAAIVGMLADP--KEA 393 (923)
Q Consensus 318 ~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~~ 393 (923)
+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.++... .+||+|.|++.++.+. ...
T Consensus 326 ~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~ 402 (867)
T TIGR01524 326 ELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQT 402 (867)
T ss_pred cchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhH
Confidence 9999999999999999999999999999988642 22345566777776554422 3599999999877532 223
Q ss_pred hcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC----------ChhHHHHHHHHHHHHHHcCCeEE
Q 002430 394 RAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSL 463 (923)
Q Consensus 394 ~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~l 463 (923)
...++.++.+||+|.+|+|++++++.++.+++++||+||.++++|+. +++.++++++.+++++++|+|++
T Consensus 403 ~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 482 (867)
T TIGR01524 403 ASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVI 482 (867)
T ss_pred hhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 45678899999999999999998766666789999999999999963 23445678888999999999999
Q ss_pred EEEeeecCCCCC---CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCC
Q 002430 464 GVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540 (923)
Q Consensus 464 ~~A~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~ 540 (923)
++||++++..+. +..|++|+|+|+++++||||||++++|++||++||+|+|+||||+.||.+||+++||.+ ..
T Consensus 483 avA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~ 558 (867)
T TIGR01524 483 AVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----ND 558 (867)
T ss_pred EEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CC
Confidence 999998765432 12478899999999999999999999999999999999999999999999999999963 24
Q ss_pred cccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhc
Q 002430 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 620 (923)
Q Consensus 541 ~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~a 620 (923)
.++|.+.+ .++++++.+.+++.++|||++|+||+++|+.||++|++|+|||||+||+||||+||||||||+|+|+||++
T Consensus 559 v~~g~~l~-~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~a 637 (867)
T TIGR01524 559 FLLGADIE-ELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEA 637 (867)
T ss_pred eeecHhhh-hCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHh
Confidence 56665543 67888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcHHHHHHHHHHhcccccccccCC
Q 002430 621 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGTIMTISKDR 699 (923)
Q Consensus 621 ADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~-~~~~~~~il~i~l~~d~~~~~l~~~~ 699 (923)
||+||++|||++|+.++++||++|+||+|++.|.++.|+..++.+++..++.+ +|++|+|++|+|+++|.+++++++|+
T Consensus 638 ADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~~ 717 (867)
T TIGR01524 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWDK 717 (867)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999988777766665555 79999999999999997789999999
Q ss_pred CCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCccccCCCHHHHHHHHHHHHHHHHHHHhhhh
Q 002430 700 VKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVT 777 (923)
Q Consensus 700 ~~~~~--~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~ 777 (923)
++++. +|++|+.+.+...+++.|++.+++++..|++.+.... .... ......++..|+.+++++.+++|++
T Consensus 718 ~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~t~~f~~~~~~~~~~~~~~ 790 (867)
T TIGR01524 718 MDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFS------ANTV-EEQALFQSGWFVVGLLSQTLVVHMI 790 (867)
T ss_pred CChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc------ccch-hhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 98873 5666877777777788899888777766655432110 0000 0122356888999999999999999
Q ss_pred ccCC-CCcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccchhhH--HHHHHHHHHHHHHHHHHHHHHHHHh
Q 002430 778 RSRS-WSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGW--AGVIWLYSLVTYFPLDILKFGIRYI 849 (923)
Q Consensus 778 r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~K~~~~~~ 849 (923)
|+++ ++|.+++.+..+++.++.+++.++++..+-..++.+.++++.| |+.++++++ .++.++.|.+..+.
T Consensus 791 R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~--~~~~e~~k~~~~~~ 863 (867)
T TIGR01524 791 RTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGY--MATMQLVKTFYIRR 863 (867)
T ss_pred CcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHH--HHHHHHHHHHHHHh
Confidence 9987 4444434333333333333332222211001233455443332 333333333 36678888664443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-128 Score=1202.55 Aligned_cols=831 Identities=23% Similarity=0.367 Sum_probs=677.3
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHhcC-
Q 002430 15 ESVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG- 91 (923)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~- 91 (923)
...|||..+.+++++.|+++ .+|||++||++|+++||+|+++.++ .+.|+.|+++|++|++++++++++++++....
T Consensus 13 ~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 13 VEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred ccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 37789999999999999998 6799999999999999999998755 67889999999999999999999998875321
Q ss_pred -----CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCe
Q 002430 92 -----GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDI 166 (923)
Q Consensus 92 -----~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~ 166 (923)
.....+|.++++|++++++++.++++||+|+++++++|+++.+++++|+|||++++|+++||||||+|.|++||+
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~ 172 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDR 172 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCE
Confidence 112347899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccceEEEecCCeEEEeccccCCCcceecCCCC----------cccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-
Q 002430 167 VPADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 235 (923)
Q Consensus 167 IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~----------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~- 235 (923)
|||||+|++|+.+.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|.+|++++++++.
T Consensus 173 IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 252 (997)
T TIGR01106 173 IPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLE 252 (997)
T ss_pred EeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcc
Confidence 999999999977999999999999999998864 699999999999999999999999999999998776
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCce
Q 002430 236 NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (923)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~il 315 (923)
.+++++++.++++++++..+++++.++.+ +.+...+.+|.+.+..++++++++|||+||++++++++.++++|+++|++
T Consensus 253 ~~~~pl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~il 331 (997)
T TIGR01106 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFF-ILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCL 331 (997)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcE
Confidence 46799999999998876554433222222 22233456788888999999999999999999999999999999999999
Q ss_pred eccCchhhhccCceEEEecCCCccccCcceeeeeeeeecc---cC--------CCh-----HHHHHHHHHHccc------
Q 002430 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---KG--------VEK-----EHVILLAARASRT------ 373 (923)
Q Consensus 316 vk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~---~~--------~~~-----~~~l~~a~~~~~~------ 373 (923)
+|+++++|+||++++||||||||||+|+|+|.++++.... .+ .+. +.++..++.|+..
T Consensus 332 vk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~ 411 (997)
T TIGR01106 332 VKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQ 411 (997)
T ss_pred ecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeecccc
Confidence 9999999999999999999999999999999988642110 00 111 2345555554321
Q ss_pred ---------cCcchHHHHHHHhcC----ChhhhhcCceeEEeecCCCCCcceEEEEEec---CCcEEEEEcCcHHHHHHh
Q 002430 374 ---------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS---DGNWHRASKGAPEQILAL 437 (923)
Q Consensus 374 ---------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~---~g~~~~~~KGa~e~il~~ 437 (923)
..+||+|.|++.++. +..+.+..++.++.+||+|+||||++++... ++++++++|||||.|+++
T Consensus 412 ~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~ 491 (997)
T TIGR01106 412 ENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILER 491 (997)
T ss_pred CCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHH
Confidence 125899999998753 3445567789999999999999999887632 246789999999999999
Q ss_pred ccC----------ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-----------CCCCCCceEEEEeccCCCCCc
Q 002430 438 CNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQLVGLLPLFDPPRH 496 (923)
Q Consensus 438 ~~~----------~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~-----------~~~e~~l~llG~i~i~D~lr~ 496 (923)
|+. +++.++.+.+.+++++++|+||+++||+.+++++. +..|++|+|+|+++++||||+
T Consensus 492 c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~ 571 (997)
T TIGR01106 492 CSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRA 571 (997)
T ss_pred hhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChH
Confidence 962 23456778889999999999999999998864321 123789999999999999999
Q ss_pred cHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCC----------------------CCcccCcccccccCcc
Q 002430 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSLLGQDKDASIAAL 554 (923)
Q Consensus 497 ~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~----------------------~~~l~~~~~~~~~~~~ 554 (923)
|++++|++|+++||+|+|+|||++.||.++|+++|+.++... ..+++|.+. +.++++
T Consensus 572 ~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l-~~l~~~ 650 (997)
T TIGR01106 572 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDL-KDMTSE 650 (997)
T ss_pred HHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHh-hhCCHH
Confidence 999999999999999999999999999999999999643210 124445444 356778
Q ss_pred hHHHHhhhcC--eEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-cchHHHhhccCEEecCCCch
Q 002430 555 PVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLS 631 (923)
Q Consensus 555 ~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~gtd~A~~aADivl~~~~~~ 631 (923)
++++.+++.+ ||||++|+||++||+.+|++|++|+|+|||+||+||||+|||||||| +|+|+|+++||++|+||||+
T Consensus 651 el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~ 730 (997)
T TIGR01106 651 QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 730 (997)
T ss_pred HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHH
Confidence 8889888765 99999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCcHHHHHHHHHHhccc-ccccccCCCCCC---CCC
Q 002430 632 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALI-WKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQP 706 (923)
Q Consensus 632 ~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~-~~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~~---~~p 706 (923)
+|+.++++||++|+|+++++.|.++.|+..++..+++.++ .+.|++|+|++|+|+++|.+ ++++++|++++. ++|
T Consensus 731 ~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P 810 (997)
T TIGR01106 731 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCC
Confidence 9999999999999999999999999999877766665544 55689999999999999985 799999887654 123
Q ss_pred Cchh-----HHH-HHHHHHHHHHHHHHHHHHHHHHHHh-cccccc-ccCc---------cccCCC-------------HH
Q 002430 707 DSWK-----LKE-IFATGVVLGSYLAIMTVVFFWLMRK-TDFFSD-AFGV---------RSLRTR-------------PD 756 (923)
Q Consensus 707 ~~~~-----~~~-~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~g~---------~~~~~~-------------~~ 756 (923)
.+++ .+. ++.+.+..|+++++..++.|++.+. .+|... .++. .+..+. ..
T Consensus 811 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (997)
T TIGR01106 811 RNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEF 890 (997)
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhh
Confidence 3221 122 3334456688999888876665442 122110 0110 000000 01
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCC-c-ccchhHHHHHHHHHHHHHHHHHHHhhc--ccccccccchhhHHHHHHHHH
Q 002430 757 EMMAALYLQVSIISQALIFVTRSRSWS-F-IERPGLLLATAFVIAQLVATFIAVYAN--WSFARIEGCGWGWAGVIWLYS 832 (923)
Q Consensus 757 ~~~t~~f~~~~~~~~~~~~~~r~~~~~-~-~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 832 (923)
+.+|++|..+++++.++++++|+.+.+ | ...++++++.++++.+++..++ .|.+ ..++++.++++.+|+.+++++
T Consensus 891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~ 969 (997)
T TIGR01106 891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTWWFCAFPYS 969 (997)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHHHHHHHHHH
Confidence 468999999999999999999997643 2 2234556666666665554443 3432 234567778888888888888
Q ss_pred HHHHHHHHHHHHHHHH
Q 002430 833 LVTYFPLDILKFGIRY 848 (923)
Q Consensus 833 ~~~~~~~~~~K~~~~~ 848 (923)
++.++..++.|+++|+
T Consensus 970 ~~~~~~~~~~k~~~r~ 985 (997)
T TIGR01106 970 LLIFVYDEIRKLIIRR 985 (997)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8888889999988765
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-126 Score=1178.97 Aligned_cols=800 Identities=27% Similarity=0.398 Sum_probs=672.7
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHhhcCCCccCccc-ccHHHHHHHHh-hchHHHHHHHHHHHHHHHhcCC
Q 002430 17 VDLERIPIEEVFEQLKCS-REGLT-SDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFM-WNPLSWVMEAAAIMAIALANGG 92 (923)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~-~~GLs-~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~-~~~~~~~l~~~ail~~~l~~~~ 92 (923)
-+||.++.+++++.|+++ .+||| ++|+++|+++||+|+++.++ .++|+.|+++| ++|++++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 369999999999999998 56999 99999999999999999765 67899999999 9999999999999999986
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceE
Q 002430 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (923)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ 172 (923)
+|.+++.|++++++++.++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEeccccCCCcceecCCCC--------------cccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-CC
Q 002430 173 LLEGDPLKIDQSALTGESLPVTKNPYD--------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQ 237 (923)
Q Consensus 173 ll~g~~~~Vdes~LTGEs~pv~K~~~~--------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~~ 237 (923)
|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|.+||+++++++. .+
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 999977999999999999999999863 799999999999999999999999999999999876 46
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceec
Q 002430 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (923)
Q Consensus 238 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 317 (923)
++++|+.++++++++..+.++.+++.+++.| +.+.++.+.+..++++++++|||+||++++++++.++++|+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 8999999999998765443332222223333 345678889999999999999999999999999999999999999999
Q ss_pred cCchhhhccCceEEEecCCCccccCcceeeeeeeeec-c---cC--C-------------------ChHHHHHHHHHHcc
Q 002430 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF-A---KG--V-------------------EKEHVILLAARASR 372 (923)
Q Consensus 318 ~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~-~---~~--~-------------------~~~~~l~~a~~~~~ 372 (923)
+++++|+||++|+||||||||||+|+|+|.+++.... . .+ + ...+++..++.|+.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 9999999999999999999999999999998764210 0 00 0 01234555544433
Q ss_pred c--------cCcchHHHHHHHhcCC--hhhhhcCceeEEeecCCCCCcceEEEEEec-CCcEEEEEcCcHHHHHHhccC-
Q 002430 373 T--------ENQDAIDAAIVGMLAD--PKEARAGVREVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNC- 440 (923)
Q Consensus 373 ~--------~~~~~~~~ai~~~~~~--~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~~~~- 440 (923)
. ..+||+|.|++.++.. .+..+..++.++++||+|.+|||+++++.. +++++.++|||||.|+.+|+.
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 2 1247999999987642 223345688899999999999999988753 567899999999999999963
Q ss_pred ----------ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC
Q 002430 441 ----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV 510 (923)
Q Consensus 441 ----------~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI 510 (923)
+++.++.+++.+++++++|+|++++||+++ +.+|+|+|+++++||||||++++|++||++||
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 133456778889999999999999999975 45799999999999999999999999999999
Q ss_pred EEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEE
Q 002430 511 NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590 (923)
Q Consensus 511 ~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m 590 (923)
+++|+|||++.||.++|+++||..+. ...++|.+. +.++++++++.+++..||||++|+||.++|+.+|++|++|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~l-~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSKT--SQSVSGEKL-DAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHHh-HhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 99999999999999999999997542 334555544 367888999999999999999999999999999999999999
Q ss_pred EcCCccChHhhhcCCeeeEec-cchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 002430 591 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI- 668 (923)
Q Consensus 591 ~GDG~NDapaLk~AdVGIamg-~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~- 668 (923)
||||+||+||||+|||||||| +|+|+|+++||++|++|||++|+.++++||++|+|+++++.|.++.|+..++.+++.
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 702 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALAT 702 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999998 799999999999999999999999999999999999999999999999776655443
Q ss_pred HHhhcCCCcHHHHHHHHHHhccc-ccccccCCCCCC---CCCCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002430 669 ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSW----KLKEIFATGVVLGSYLAIMTVVFFWLMRKTD 740 (923)
Q Consensus 669 ~~~~~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~~---~~p~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 740 (923)
.+..+.|++|+|++|+|+++|++ ++++++|++++. ++|+++ ..+..+...++.|+++++++++.|++.+..
T Consensus 703 ~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 781 (884)
T TIGR01522 703 LMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD- 781 (884)
T ss_pred HHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 34467899999999999999987 589999887654 123322 234556667788988888877666543311
Q ss_pred ccccccCccccCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCccc---chhHHHHHHHHHHHHHHHHHHHhhc--cccc
Q 002430 741 FFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVYAN--WSFA 815 (923)
Q Consensus 741 ~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~ 815 (923)
+ ....+.+|++|..+++++.++.|++|+.+.+++. ..+.++++++++..++..++ +|.+ -.++
T Consensus 782 ------~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~p~~~~~f 849 (884)
T TIGR01522 782 ------G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLV-IYFPPLQSVF 849 (884)
T ss_pred ------C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 1 0234567999999999999999999997654332 23446666666665554333 4432 2344
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 816 RIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 848 (923)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~ 848 (923)
.+.+++|..|+.+++++++.+++.++.|+++|.
T Consensus 850 ~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 850 QTEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 567788888888888999999999999988764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-126 Score=1183.04 Aligned_cols=814 Identities=22% Similarity=0.341 Sum_probs=665.2
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHhhcCCCccCcccc-cHHHHHHHHhhchHHHHHHHHHHHHHHHhc------CC
Q 002430 23 PIEEVFEQLKCS-REGLT--SDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALAN------GG 92 (923)
Q Consensus 23 ~~~~~~~~l~~~-~~GLs--~~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~~l~~~ail~~~l~~------~~ 92 (923)
..+++++.|+++ ++||| ++||++|+++||+|+++.++. ++|+.|+++|++|++++|+++++++++++. ..
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 688999999998 66999 999999999999999998865 778999999999999999999999999762 12
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccce
Q 002430 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMAN-LAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADA 171 (923)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~-~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~ 171 (923)
++..+|.++++|+++++++.++++++|++++++.++|++. .+++++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3345899999999999999999999999999999999864 477999999999999999999999999999999999999
Q ss_pred EEEecCCeEEEeccccCCCcceecCCCCc--ccccceeecCeEEEEEEEecchhhHHhHHhhhhccCCCCcHHHHHHHHH
Q 002430 172 RLLEGDPLKIDQSALTGESLPVTKNPYDE--VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 249 (923)
Q Consensus 172 ~ll~g~~~~Vdes~LTGEs~pv~K~~~~~--v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~~~~~~~~~~~~i~ 249 (923)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.|.+|++.++|++||.+|.+||++++++.+++++++++.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999889999999999999999998765 9999999999999999999999999999999987767789999999988
Q ss_pred HHHHHHHHHHHHHHHHH---HHhcc---c---------cchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCc
Q 002430 250 NFCICSIAVGIVAEIII---MYPVQ---H---------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (923)
Q Consensus 250 ~~~~~~i~~~~~~~~~~---~~~~~---~---------~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (923)
+++...+++..++.+++ .|... . .++.+.+..++++++++|||+||++++++++.++++|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 77543332222211111 11111 1 246677888999999999999999999999999999999999
Q ss_pred eeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecc---cC----CC--hHHHHHHH-HHHcccc----------
Q 002430 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---KG----VE--KEHVILLA-ARASRTE---------- 374 (923)
Q Consensus 315 lvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~---~~----~~--~~~~l~~a-~~~~~~~---------- 374 (923)
++|+++++|+||++++||||||||||+|+|+|.+++..... .+ .+ ..+++..+ .+++...
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 99999999999999999999999999999999987653210 00 00 12223322 3322211
Q ss_pred -CcchHHHHHHHhcC----ChhhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCC--------
Q 002430 375 -NQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-------- 441 (923)
Q Consensus 375 -~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-------- 441 (923)
.+||+|.|++.++. +..+.+..++.++.+||+|.+|||+++++..++++++++|||||.++++|+.-
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 25899999998763 33344556778889999999999999998767778999999999999999631
Q ss_pred --hhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC---CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEc
Q 002430 442 --EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 516 (923)
Q Consensus 442 --~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlT 516 (923)
.+.++.+++.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||||++++|++||++||+|+|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0135678888999999999999999998864332 23478999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCcc
Q 002430 517 GDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVN 596 (923)
Q Consensus 517 GD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~N 596 (923)
|||+.||.+||++|||.++. ..+++|.+.+ .++++++++++++.+||||++|+||+++|+.||++|++|+|||||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~~--~~vi~G~~~~-~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTFG--GLAMEGKEFR-RLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCCC--ceEeeHHHhh-hCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 99999999999999997531 2455565543 67788999999999999999999999999999999999999999999
Q ss_pred ChHhhhcCCeeeEec-cchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcC
Q 002430 597 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKF 674 (923)
Q Consensus 597 DapaLk~AdVGIamg-~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~-~~~~~~ 674 (923)
|+||||+|||||||| +|+|+|+++||++|++|+|++|+.++++||++|+|+++++.|.+++|+..++..++. .+..+.
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 999999999999999999999999999999999999999999999999766655544 444677
Q ss_pred CCcHHHHHHHHHHhccc-ccccccCCCCCC---CCCCchh----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 002430 675 DFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSWK----LKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAF 746 (923)
Q Consensus 675 ~~~~~~il~i~l~~d~~-~~~l~~~~~~~~---~~p~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 746 (923)
|++|+|++|+|+++|.+ ++++++|++.+. .+|.+|+ .+..+...+..|+++++++++.|++... ++.. .
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~-~ 836 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDV-S 836 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcc-c
Confidence 99999999999999975 799999887654 2333332 3456666778899988888876665432 1100 0
Q ss_pred Cccc-cCCCHHHHHHHHHHHHHHHHHHHhhhhccCCC--Cc---ccchhHHHHHHHHHHHHHHHHHHHhhcccccccccc
Q 002430 747 GVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRSW--SF---IERPGLLLATAFVIAQLVATFIAVYANWSFARIEGC 820 (923)
Q Consensus 747 g~~~-~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~--~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (923)
+... ........+|+.|.++++++.++.+++|+.+. +| +.|+ +++.++++..++..++..++ ..++++.++
T Consensus 837 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~--~~~~~~~~~~~l~~~~~~~~-~~~f~~~~l 913 (941)
T TIGR01517 837 GPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNR--IFVTIMGFTFGFQVIIVEFG-GSFFSTVSL 913 (941)
T ss_pred CcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccH--HHHHHHHHHHHHHHHHHHHH-HHHhcccCC
Confidence 1000 00123457899999999999999999998653 22 3343 55555555555554443333 234466777
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Q 002430 821 GWGWAGVIWLYSLVTYFPLDILKFG 845 (923)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~K~~ 845 (923)
+|..|+.+++++++.+++.++.|++
T Consensus 914 ~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 914 SIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888888888888888888888875
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-127 Score=1078.72 Aligned_cols=813 Identities=23% Similarity=0.339 Sum_probs=643.8
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHhhcCCCccCcccc-cHHHHHHHHhhchHHHHHHHHHHHHHHHhcC-CCCCCc
Q 002430 23 PIEEVFEQLKCS-REGLTS--DEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANG-GGRDPD 97 (923)
Q Consensus 23 ~~~~~~~~l~~~-~~GLs~--~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~-~~~~~~ 97 (923)
-.+.+.+.|+++ ..||+. +|..+|++.||.|.+|++++ ++|...++.|.+.-..+|.++|++|+.++.. .+.+..
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 378899999998 679987 89999999999999999885 5666678999999999999999999999873 344679
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEec
Q 002430 98 WQDFVGIIVLLVINSTISFIEENNAGNAAAALMA-NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (923)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~-~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 176 (923)
|++++.|++.+++..++....+|+.++....|.+ ....+..|+|||+.++|+..|||||||+.|+.||.|||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999998876655555555555555555555543 335578999999999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcceecCC--CCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHHHHHH
Q 002430 177 DPLKIDQSALTGESLPVTKNP--YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCI 253 (923)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~--~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~ 253 (923)
+++.||||++||||.++.|.+ ..++++||++.+|.+.++|+++|.+|..|++..++.... +++|+|-.+++++..+.
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 457999999999999999999999999999999998875 88999999888765421
Q ss_pred ---HHHHHHHHHHHHHHHhcc-----cc---ch--------HHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCc
Q 002430 254 ---CSIAVGIVAEIIIMYPVQ-----HR---KY--------RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (923)
Q Consensus 254 ---~~i~~~~~~~~~~~~~~~-----~~---~~--------~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (923)
..++...++.++..|+.. +. .+ .+.+..++.++++++|+|||+++++++++++++|.++++
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 112221222223333321 11 11 122333455677899999999999999999999999999
Q ss_pred eeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccC--------CChH--HHHHHH-HHHccc----------
Q 002430 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG--------VEKE--HVILLA-ARASRT---------- 373 (923)
Q Consensus 315 lvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~--------~~~~--~~l~~a-~~~~~~---------- 373 (923)
+||+++|+|+||+.++||+|||||||.|+|+|.+.++....+. .++. +++..+ +.++..
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 9999999999999999999999999999999999876432211 1111 112111 111110
Q ss_pred ---cCcchHHHHHHHhc----CChhhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC------
Q 002430 374 ---ENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC------ 440 (923)
Q Consensus 374 ---~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~------ 440 (923)
..++|++.|++++. .|.++.+...+.++++||+|.+|+|+++++.++|..+.++|||.|.|+++|+.
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 12479999998865 46777888889999999999999999999988777349999999999999974
Q ss_pred -----ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCC-------C-CCCCCCCceEEEEeccCCCCCccHHHHHHHHHh
Q 002430 441 -----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-------T-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALN 507 (923)
Q Consensus 441 -----~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~-------~-~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~ 507 (923)
+++.++.+++.++.||++|+|++|+||++..+. + .+..+.+|+++|+++|+||+|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 345566889999999999999999999984322 1 245788999999999999999999999999999
Q ss_pred CCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCE
Q 002430 508 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHI 587 (923)
Q Consensus 508 aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~ 587 (923)
|||+|.|+||||..||++||.+|||.++..+-..+.|.+. ..+++++.++++++.+|+||.+|.||+.+|+.|+++||+
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eF-r~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEF-RELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhh-hhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 9999999999999999999999999876443344555544 488999999999999999999999999999999999999
Q ss_pred EEEEcCCccChHhhhcCCeeeEec-cchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 002430 588 CGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR-IVLGF 665 (923)
Q Consensus 588 V~m~GDG~NDapaLk~AdVGIamg-~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~-~~~~~ 665 (923)
||+||||.||+||||+||||.||| .|||+|||+|||||+||||++|+.+++|||..|+||+||++|+++.|+. +++.+
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999984 44555
Q ss_pred HHHHHhhcCCCcHHHHHHHHHHhccc-ccccccCCCCCC---C----CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 666 MLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---P----QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMR 737 (923)
Q Consensus 666 ~~~~~~~~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~~---~----~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 737 (923)
..+...-..|++++|+||+|+++|.+ ++++++|++.+. + +..+...+..|...+.+.+|+.++.+.+.+...
T Consensus 821 v~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~ 900 (1034)
T KOG0204|consen 821 VSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK 900 (1034)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 55555566899999999999999977 799999987653 1 233445566777888899999888876554433
Q ss_pred hccccccccCcc-ccCCCHHHHHHHHHHHHHHHHHHHhhhhccCC---CC--cccchhHHHHHHHHHHHHHHHHHHHhhc
Q 002430 738 KTDFFSDAFGVR-SLRTRPDEMMAALYLQVSIISQALIFVTRSRS---WS--FIERPGLLLATAFVIAQLVATFIAVYAN 811 (923)
Q Consensus 738 ~~~~~~~~~g~~-~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~---~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 811 (923)
. . |+.. ..+....+..|++|.+++++|.++-++.|+-. .| .++|+ ++++++...++..++.+..-
T Consensus 901 ~--i----f~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~---~F~~ii~~T~v~QviIveF~ 971 (1034)
T KOG0204|consen 901 S--I----FGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNR---LFCVIITITVVSQVIIVEFG 971 (1034)
T ss_pred h--h----hccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCc---eEEEEeeeeeehhhhhhhhc
Confidence 1 1 2211 11112445569999999999999999999855 11 22333 23333333333333333322
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002430 812 WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFG 845 (923)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 845 (923)
..++...+++|.-|++++.+.++.+..-.+.|.+
T Consensus 972 g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 972 GAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred CcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 3445677888887777777666655555544433
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-117 Score=1098.62 Aligned_cols=779 Identities=27% Similarity=0.367 Sum_probs=625.5
Q ss_pred HHHHhhchHHHHHHHHHHHHHHHhcC---CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Q 002430 66 FLGFMWNPLSWVMEAAAIMAIALANG---GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD 142 (923)
Q Consensus 66 ~l~~~~~~~~~~l~~~ail~~~l~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rd 142 (923)
+++||++|++++|+++++++++++.. .....+|.++++|++++++++.++++||+|+++++++|++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 47899999999999999999998632 222358999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC-------------Ccccccceeec
Q 002430 143 GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQ 209 (923)
Q Consensus 143 g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~-------------~~v~~Gt~v~~ 209 (923)
|++++|+++||||||+|.|++||.|||||+|++|+++.||||+|||||.|+.|.++ |++|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999997899999999999999999875 78999999999
Q ss_pred CeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-c----ccch----HHHH
Q 002430 210 GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV-Q----HRKY----RDGI 279 (923)
Q Consensus 210 G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~----~~~~----~~~~ 279 (923)
|++.++|++||.+|++||++++++.. .+++++|+.+++++.++..++++.+++.+++.+.. . ..+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999988776 47899999999998876543333222222221111 1 1122 2344
Q ss_pred HHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeec-----
Q 002430 280 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF----- 354 (923)
Q Consensus 280 ~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~----- 354 (923)
..++++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 466788999999999999999999999999999999999999999999999999999999999999998764210
Q ss_pred ------ccCCC-------------------hHHHHHHHHHHccc------------cCcchHHHHHHHhcCCh----h--
Q 002430 355 ------AKGVE-------------------KEHVILLAARASRT------------ENQDAIDAAIVGMLADP----K-- 391 (923)
Q Consensus 355 ------~~~~~-------------------~~~~l~~a~~~~~~------------~~~~~~~~ai~~~~~~~----~-- 391 (923)
..+++ .+.++..++.|+.. ..+||.|.|++.++.+. .
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00010 12234444444431 12599999998765211 0
Q ss_pred --------------hhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC-----------ChhHHH
Q 002430 392 --------------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-----------REDVRK 446 (923)
Q Consensus 392 --------------~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~ 446 (923)
..+..++.++.+||+|.+|||++++++ ++++.+++|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 124567789999999999999999875 467899999999999999963 134567
Q ss_pred HHHHHHHHHHH-cCCeEEEEEeeecCCCC----------CCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEE
Q 002430 447 KVHAVIDKFAE-RGLRSLGVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515 (923)
Q Consensus 447 ~~~~~i~~~a~-~GlR~l~~A~~~~~~~~----------~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~ml 515 (923)
++.+++++|++ +|+||+++|||.+++++ .+..|++|+|+|+++++||||+|++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986432 24468899999999999999999999999999999999999
Q ss_pred ccCChHHHHHHHHHhCCCCCCCC--CCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcC
Q 002430 516 TGDQLAIGKETGRRLGMGTNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 593 (923)
Q Consensus 516 TGD~~~tA~~ia~~~Gi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GD 593 (923)
|||+..||.++|+++|+..+..+ ...++|.+. +.+++++..+.+.+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l-~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREF-DEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHH-hhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999753211 123444443 356677788888888999999999999999999999999999999
Q ss_pred CccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh
Q 002430 594 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL-IW 672 (923)
Q Consensus 594 G~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~-~~ 672 (923)
|+||+||||+||||||||+|+++|+++||+++.+|||++|+.++++||++|+|+++++.|.+++|+..++..+++.+ .+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987776666543 45
Q ss_pred cCCCcHHHHHHHHHHhccc-ccccccCCCCCCC---CCC----chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccc
Q 002430 673 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPSP---QPD----SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKT-DFFS 743 (923)
Q Consensus 673 ~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~~~---~p~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 743 (923)
+.||+|+|++|+|+++|.+ +++++.+++++.. +|+ +...++.+..+++.|+++++++++.|++.+.. ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6799999999999999965 6889988876541 121 22234566677788999998877666554321 2211
Q ss_pred c--cc--Cccc---c----CCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCccc---chhHHHHHHHHHHHHHHHHHHHh
Q 002430 744 D--AF--GVRS---L----RTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVY 809 (923)
Q Consensus 744 ~--~~--g~~~---~----~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 809 (923)
. .. +..+ . .....+.+|+.|.++++++.++.|++|+.+.+++. ..+.++++++++..++..++ .|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~-~~ 877 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLI-LY 877 (917)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHH-HH
Confidence 0 00 0000 0 00134567999999999999999999997644322 12346666666555554333 44
Q ss_pred hc--ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 810 AN--WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847 (923)
Q Consensus 810 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~ 847 (923)
.+ -.++++.+++|..|+++++++++.++..++.|+++|
T Consensus 878 v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 878 VPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33 234567788899898889999999999999998753
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-120 Score=1026.19 Aligned_cols=845 Identities=24% Similarity=0.405 Sum_probs=698.0
Q ss_pred ccccchHHhhcc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHH
Q 002430 4 DKAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEA 80 (923)
Q Consensus 4 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~ 80 (923)
.+..+++++++| .+|.|++|.+|+.++++++ .+|||.+++.+++.+-|+|.+++++ .+.|.+|++|+++.+.+++++
T Consensus 23 ~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~ 102 (1019)
T KOG0203|consen 23 KKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWI 102 (1019)
T ss_pred chhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHH
Confidence 345578899999 9999999999999999998 7899999999999999999998877 567999999999999999999
Q ss_pred HHHHHHHHhc-----CCCC-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCC
Q 002430 81 AAIMAIALAN-----GGGR-DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILV 154 (923)
Q Consensus 81 ~ail~~~l~~-----~~~~-~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv 154 (923)
+++++++... ...+ ....+-+.++..++++..+..|+||.+..+.+++.+++.|+.+.|+|||+...+.++|||
T Consensus 103 ~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelV 182 (1019)
T KOG0203|consen 103 GAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELV 182 (1019)
T ss_pred HHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcc
Confidence 9999997431 1111 122333445556677888899999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC----------CcccccceeecCeEEEEEEEecchhh
Q 002430 155 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIEAVVIATGVHTF 224 (923)
Q Consensus 155 ~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~----------~~v~~Gt~v~~G~~~~~V~~tG~~T~ 224 (923)
|||+|.++-||+||||.|++++..+++|+|+|||||.|..+++. |+.|.+|.+.+|.+.++|++||.+|.
T Consensus 183 vGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv 262 (1019)
T KOG0203|consen 183 VGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTV 262 (1019)
T ss_pred cccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceE
Confidence 99999999999999999999999999999999999999999773 67899999999999999999999999
Q ss_pred HHhHHhhhhc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHH
Q 002430 225 FGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 303 (923)
Q Consensus 225 ~g~i~~l~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~ 303 (923)
+|+|+.+... ...++++++.++++..+.....++ +.++++......++.|.+++.+++.++++.+|++|+..+++.++
T Consensus 263 ~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Lt 341 (1019)
T KOG0203|consen 263 MGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLT 341 (1019)
T ss_pred EeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHH
Confidence 9999998766 467889999998887664332222 22222222223477888998889999999999999999999999
Q ss_pred HHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeeccc----------------CCChHHHHHHH
Q 002430 304 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK----------------GVEKEHVILLA 367 (923)
Q Consensus 304 ~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~----------------~~~~~~~l~~a 367 (923)
.-++||+++++++|++.++|+||+.++||+|||||||+|.|+|.+.+.+..-. ...-.++++.+
T Consensus 342 ltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~ 421 (1019)
T KOG0203|consen 342 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIA 421 (1019)
T ss_pred HHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877531100 01112455555
Q ss_pred HHHccc---------------cCcchHHHHHHHhc----CChhhhhcCceeEEeecCCCCCcceEEEEEecC---CcEEE
Q 002430 368 ARASRT---------------ENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSD---GNWHR 425 (923)
Q Consensus 368 ~~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~---g~~~~ 425 (923)
..|++. ..+|+.+.|+++++ ++.++.++..+.+.++||+|.+|+.-.++...+ .+..+
T Consensus 422 ~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l 501 (1019)
T KOG0203|consen 422 TLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLL 501 (1019)
T ss_pred HHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCcccee
Confidence 555432 13588899999876 455778888999999999999999988877544 57889
Q ss_pred EEcCcHHHHHHhccC----------ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-----------CCCCCCceE
Q 002430 426 ASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQL 484 (923)
Q Consensus 426 ~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~-----------~~~e~~l~l 484 (923)
..|||||.++++|+. ++...+.+++...++...|-||++++++.+++++. +.+..+|.|
T Consensus 502 ~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~F 581 (1019)
T KOG0203|consen 502 VMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRF 581 (1019)
T ss_pred eecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccc
Confidence 999999999999973 44567788888999999999999999999886542 234578999
Q ss_pred EEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCC----------------------CCcc
Q 002430 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSL 542 (923)
Q Consensus 485 lG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~----------------------~~~l 542 (923)
+|++++.||||..+|+++.+||.|||||+|+||||+.||++||++.||..+..+ ..++
T Consensus 582 lGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~Vi 661 (1019)
T KOG0203|consen 582 LGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVI 661 (1019)
T ss_pred cchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEE
Confidence 999999999999999999999999999999999999999999999997542110 0123
Q ss_pred cCcccccccCcchHHHHhhhcC--eEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-cchHHHhh
Q 002430 543 LGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARS 619 (923)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~gtd~A~~ 619 (923)
+|.+. ..++.+++++++++.. ||||.||+||+.||+.+|++|.+|++||||+||+||||+|||||||| .|+|++|+
T Consensus 662 hG~eL-~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKq 740 (1019)
T KOG0203|consen 662 HGSEL-PDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 740 (1019)
T ss_pred ecccc-cccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHh
Confidence 34433 3678889999998765 99999999999999999999999999999999999999999999999 99999999
Q ss_pred ccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcHHHHHHHHHHhccc-cccccc
Q 002430 620 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKFDFSPFMVLIIAILNDGT-IMTISK 697 (923)
Q Consensus 620 aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~-~~~~~~~~~~~~il~i~l~~d~~-~~~l~~ 697 (923)
|||++|+||||++|+..|++||-+|+|+||.+.|.+++|++.+..++.+ ++..|+|+.++++|+|.+.+|+. +++++|
T Consensus 741 AADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAY 820 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAY 820 (1019)
T ss_pred hcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhc
Confidence 9999999999999999999999999999999999999999877766554 45688999999999999999987 699999
Q ss_pred CCCCCC-----CC-C--CchhHHHHHHH-HHHHHHHHHHHHHHHHH-HHHhcccccccc----------CccccCCCHHH
Q 002430 698 DRVKPS-----PQ-P--DSWKLKEIFAT-GVVLGSYLAIMTVVFFW-LMRKTDFFSDAF----------GVRSLRTRPDE 757 (923)
Q Consensus 698 ~~~~~~-----~~-p--~~~~~~~~~~~-~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~----------g~~~~~~~~~~ 757 (923)
|.++.. || | ++.-..+++.+ ++..|+++++..|+.|+ ++...||+|... +++++.|++++
T Consensus 821 E~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQ 900 (1019)
T KOG0203|consen 821 EKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQ 900 (1019)
T ss_pred cCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccc
Confidence 987543 21 2 23333454444 46779999999996655 445566765431 12333333322
Q ss_pred -------------HHHHHHHHHHHHHHHHhhhhccCCCC--cccchhHHHHHHHHHHHHHHHHHHHhhc-ccccccccch
Q 002430 758 -------------MMAALYLQVSIISQALIFVTRSRSWS--FIERPGLLLATAFVIAQLVATFIAVYAN-WSFARIEGCG 821 (923)
Q Consensus 758 -------------~~t~~f~~~~~~~~~~~~~~r~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 821 (923)
++|..|.++++.|.+..+.+.+++-+ -....||.+++++++-.+++.++++-.. ...+.+.++.
T Consensus 901 eWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~ 980 (1019)
T KOG0203|consen 901 EWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLK 980 (1019)
T ss_pred cccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCC
Confidence 56888999999999988877776643 3456777888998888887777653321 1234577889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002430 822 WGWAGVIWLYSLVTYFPLDILKFGIRYIL 850 (923)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 850 (923)
|.||++.+.++++.++.+|+.|++.|.+-
T Consensus 981 ~~~wl~a~P~~ilIfvydE~Rk~~IR~~P 1009 (1019)
T KOG0203|consen 981 FQWWLVAFPFGILIFVYDEVRKLFIRRYP 1009 (1019)
T ss_pred cEEEEecccceeeeeeHHHHHhHhhhhCC
Confidence 99999999999999999999999988763
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-114 Score=1083.35 Aligned_cols=751 Identities=21% Similarity=0.262 Sum_probs=592.1
Q ss_pred CCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHH
Q 002430 35 REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTI 114 (923)
Q Consensus 35 ~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 114 (923)
.+|||++|+++|+++||+|+++.+++++|..|++++++|++++++++++++++. .+|.+++.|+++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999998889999999999999988877775555442 3789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEe--CCCeeccceEEEecCCeEEEeccccCCCcc
Q 002430 115 SFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQSALTGESLP 192 (923)
Q Consensus 115 ~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~--~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~p 192 (923)
++++++|+.++++++.. .++.++|+|||+|++|+++||||||+|.|+ +||.|||||+|++| ++.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999998888644 567999999999999999999999999999 99999999999999 699999999999999
Q ss_pred eecCCC------------------Ccccccceeec-------CeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHH
Q 002430 193 VTKNPY------------------DEVFSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLT 246 (923)
Q Consensus 193 v~K~~~------------------~~v~~Gt~v~~-------G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~ 246 (923)
+.|.+. +++|+||.|.+ |.+.++|++||.+|..|++.+++... ...+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 25999999985 78999999999999999999988665 45678888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhcc
Q 002430 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 326 (923)
Q Consensus 247 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg 326 (923)
++..+++++.++++++. +..+...+.++...+..++.+++++||++||++++++++.|+.||+|+|++||+++++|++|
T Consensus 368 ~~~~~l~~~a~i~~i~~-~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIYT-IIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 77655433332222221 11122235678888999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCCccccCcceeeeeeeeecccC----------CChHHHHHHHHHHcc------ccCcchHHHHHHHhcCCh
Q 002430 327 GMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----------VEKEHVILLAARASR------TENQDAIDAAIVGMLADP 390 (923)
Q Consensus 327 ~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~----------~~~~~~l~~a~~~~~------~~~~~~~~~ai~~~~~~~ 390 (923)
++|++|||||||||+|+|+|.++........ .....++...+.|+. ...+||+|.|++.+.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999998764211100 011122222222221 123699999999876421
Q ss_pred ----hh--h-------------hcCceeEEeecCCCCCcceEEEEEecC-CcEEEEEcCcHHHHHHhccCChhHHHHHHH
Q 002430 391 ----KE--A-------------RAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHA 450 (923)
Q Consensus 391 ----~~--~-------------~~~~~~l~~~~F~s~~k~~sv~~~~~~-g~~~~~~KGa~e~il~~~~~~~~~~~~~~~ 450 (923)
.+ . ...+++++.+||+|.+|||+++++..+ +++++++|||||.|+++|+. +..++.+++
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 00 0 245788999999999999999998654 56789999999999999984 345778889
Q ss_pred HHHHHHHcCCeEEEEEeeecCCC--------CCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHH
Q 002430 451 VIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 522 (923)
Q Consensus 451 ~i~~~a~~GlR~l~~A~~~~~~~--------~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t 522 (923)
.+++|+++|+||||+|||++++. ++++.|++|+|+|+++|+||+|||++++|++|+++||+|+|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998642 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCC---------------------------------------------------CcccCcccc--c
Q 002430 523 GKETGRRLGMGTNMYPS---------------------------------------------------SSLLGQDKD--A 549 (923)
Q Consensus 523 A~~ia~~~Gi~~~~~~~---------------------------------------------------~~l~~~~~~--~ 549 (923)
|.+||++|||.++.... .+++|.+.+ .
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 99999999996532100 011111110 0
Q ss_pred ccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCC
Q 002430 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (923)
Q Consensus 550 ~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~ 629 (923)
.++++++.+++.+..||||++|+||.++|+.||+.|++|+|||||+||+||||+|||||||+++ |++ .|||+++.+|+
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 1233467778889999999999999999999999999999999999999999999999999864 555 79999999999
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHhccc-ccccccCCCCCC---CC
Q 002430 630 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQ 705 (923)
Q Consensus 630 ~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~~---~~ 705 (923)
|++++.+|++||+++.|+++.+.|.+.+++..++..++ ....+.+|+++|++|++++++.+ .++++.+++.+. .+
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999998866554433 33466899999999999999977 688888877553 22
Q ss_pred C-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCccc-cCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 002430 706 P-DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRSWS 783 (923)
Q Consensus 706 p-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~ 783 (923)
| .+...+..+...+.+++++.++.+..|++....+|+......+. -........|++| .++.++++..+..++.+..
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~p 1001 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPP 1001 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcc
Confidence 3 22333445555667778888777777766665555421111000 0011233468888 5666777777777776643
Q ss_pred c----ccchhHHHHHHHHHHHHH
Q 002430 784 F----IERPGLLLATAFVIAQLV 802 (923)
Q Consensus 784 ~----~~~~~~~l~~~~~~~~~~ 802 (923)
+ +.|+ ++++++++..++
T Consensus 1002 f~~~~~~N~--~~~~~~~~~~~~ 1022 (1054)
T TIGR01657 1002 FREPIYKNK--PFVYLLITGLGL 1022 (1054)
T ss_pred hhhhHHHhH--HHHHHHHHHHHH
Confidence 3 3343 445555444333
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-103 Score=993.81 Aligned_cols=787 Identities=18% Similarity=0.222 Sum_probs=582.1
Q ss_pred cCCCccCcccccHH----HHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 50 FGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNA 125 (923)
Q Consensus 50 ~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~ 125 (923)
|..|.+.+.|+++| +.|++||++|++++|+++++++++...... ..+...++++++++++++.+++++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~--~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT--YRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC--CccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999998875 789999999999999999999998643322 234455667777779999999999999998
Q ss_pred HHHHhhcCCCcEEEEeC-CeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCC----eEEEeccccCCCcceecCCC--
Q 002430 126 AAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP----LKIDQSALTGESLPVTKNPY-- 198 (923)
Q Consensus 126 ~~~l~~~~~~~~~V~Rd-g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~Vdes~LTGEs~pv~K~~~-- 198 (923)
.++. ..++++|+|| |++++++|+||+|||+|.|++||.||||++|+++++ |+||||+|||||+|+.|.+.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 8764 4578999997 899999999999999999999999999999998544 99999999999999988641
Q ss_pred ----------------------------------------------Ccccccceeec-CeEEEEEEEecchhhHHhHHhh
Q 002430 199 ----------------------------------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 231 (923)
Q Consensus 199 ----------------------------------------------~~v~~Gt~v~~-G~~~~~V~~tG~~T~~g~i~~l 231 (923)
|.+++||.+++ |.+.|+|++||.+|++++..
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~-- 233 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNA-- 233 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcC--
Confidence 46789999999 89999999999999887532
Q ss_pred hhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----cch---------------HHHHHHHHHHHHhhccC
Q 002430 232 VDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH----RKY---------------RDGIDNLLVLLIGGIPI 292 (923)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~lli~~iP~ 292 (923)
.....+.+++++.++++..+++++.++.+++..++.+.+.. ..| ...+..+++++..++|+
T Consensus 234 ~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 234 TQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred CCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 12235789999999999877554433323222222211111 011 12567788999999999
Q ss_pred chhHHHHHHHHHHH------hhhhcC----CceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCC----
Q 002430 293 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGV---- 358 (923)
Q Consensus 293 ~L~~~~~~~~~~~~------~~l~~~----~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~---- 358 (923)
+||+++++++++++ .+|.++ ++++|+.+++|+||+|++||+|||||||+|+|+++++.+....++.
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 788864 5999999999999999999999999999999999998763211100
Q ss_pred -----------------------------C----------------hHHHHHHHHHHccc-------c-------CcchH
Q 002430 359 -----------------------------E----------------KEHVILLAARASRT-------E-------NQDAI 379 (923)
Q Consensus 359 -----------------------------~----------------~~~~l~~a~~~~~~-------~-------~~~~~ 379 (923)
+ ..+.+..++.|+.. . .++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 01223333333211 0 25899
Q ss_pred HHHHHHhcCCh---------h---------hhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC-
Q 002430 380 DAAIVGMLADP---------K---------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC- 440 (923)
Q Consensus 380 ~~ai~~~~~~~---------~---------~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~- 440 (923)
|.|++.++... . .....|++++.+||+|.||||++++++++|++++++|||||.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 99999875321 1 0124688899999999999999999988888999999999999999984
Q ss_pred ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-------------------------CCCCCCceEEEEeccCCCCC
Q 002430 441 REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQLVGLLPLFDPPR 495 (923)
Q Consensus 441 ~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~-------------------------~~~e~~l~llG~i~i~D~lr 495 (923)
+++.++.+.+++++|+.+|+|||++|+|.+++++. +.+|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 34567788999999999999999999999875421 34689999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCC-----------------------------------
Q 002430 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS----------------------------------- 540 (923)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~----------------------------------- 540 (923)
+|++++|+.||+|||+|||+|||+++||.+||++|||.++.....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 999999999999999999999999999999999999975421100
Q ss_pred ----cccCcccccccCc---chHHHHhhhcC--eEEecChhhHHHHHHHHhhC-CCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 541 ----SLLGQDKDASIAA---LPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 541 ----~l~~~~~~~~~~~---~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~-g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
++.|...+..+++ ..+.+++.+++ ||||++|+||+++|+.+|+. |++|+|||||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 1222221111111 12344555555 99999999999999999998 99999999999999999999999998
Q ss_pred -c-cchHHHhhccCEEecCCCchhHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CCcHHHHHH
Q 002430 611 -A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKF----DFSPFMVLI 683 (923)
Q Consensus 611 -g-~gtd~A~~aADivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~----~~~~~~il~ 683 (923)
| +|. .|+.|||++|.+ |..+..++ .|||++|+|+++++.|.+++|+.+++..+++.++..+ ++.+++++|
T Consensus 794 ~g~eg~-qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 870 (1057)
T TIGR01652 794 SGKEGM-QAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVL 870 (1057)
T ss_pred cChHHH-HHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 4 444 466799999975 99999987 7999999999999999999999888877777665433 578889999
Q ss_pred HHHHhccc-ccccccCCCCCC-----CCCC--------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCcc
Q 002430 684 IAILNDGT-IMTISKDRVKPS-----PQPD--------SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVR 749 (923)
Q Consensus 684 i~l~~d~~-~~~l~~~~~~~~-----~~p~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 749 (923)
+|++.+.+ +++++....+++ ..|. .....+.|..+++.|++++++++++.++.+...... ..|
T Consensus 871 ~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g-- 947 (1057)
T TIGR01652 871 YNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSG-- 947 (1057)
T ss_pred HHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCC--
Confidence 99999875 577764322221 1222 111233455567789999998886655544321111 112
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHhh-c---ccccccccchhhHH
Q 002430 750 SLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYA-N---WSFARIEGCGWGWA 825 (923)
Q Consensus 750 ~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~ 825 (923)
...+.....+..|+.+++..++.++. .++.|+|...... ++++++..+...++..+. . ++.......++.+|
T Consensus 948 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~wt~~~~~~~--~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~ 1023 (1057)
T TIGR01652 948 -SLDDFSSVGVIVFTALVVIVNLKIAL-EINRWNWISLITI--WGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFW 1023 (1057)
T ss_pred -cccchhhHHHHHHHHHHHHHHHHHHH-HHhHhHHHHHHHH--HHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHH
Confidence 11234456677888777777666532 3445554332211 122221111111111110 0 01111111245567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 002430 826 GVIWLYSLVTYFPLDILKFGIRYILSGK 853 (923)
Q Consensus 826 ~~~~~~~~~~~~~~~~~K~~~~~~~~~~ 853 (923)
+.+++..++.++++.++|.+++.+.|+.
T Consensus 1024 l~~ll~~~~~l~p~~~~~~~~~~~~P~~ 1051 (1057)
T TIGR01652 1024 LVLLVIVLISLLPRFTYKAIQRLFRPPD 1051 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 7777888888899999999999888754
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-99 Score=945.13 Aligned_cols=782 Identities=16% Similarity=0.169 Sum_probs=568.7
Q ss_pred hhcCCCccCcccccHH----HHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 48 HVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123 (923)
Q Consensus 48 ~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~ 123 (923)
.+|..|.+.+.|+++| +.+++||..+.|++|+++++++++..... ...+...+++++++++.++.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~--~~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAV--FGRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCccc--CCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4699999999999875 67889999999999999999999864332 22456778888999999999999999999
Q ss_pred HHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecC----CeEEEeccccCCCcceecCCC-
Q 002430 124 NAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNPY- 198 (923)
Q Consensus 124 ~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~~~- 198 (923)
++.++. ++..++|+|+|++++++|++|+|||+|.|++||.||||++|++++ .|+||||+|||||+|+.|.++
T Consensus 163 k~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 988765 357899999999999999999999999999999999999999843 499999999999999999753
Q ss_pred --------------------------------------------CcccccceeecC-eEEEEEEEecchhhHHhHHhhhh
Q 002430 199 --------------------------------------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 233 (923)
Q Consensus 199 --------------------------------------------~~v~~Gt~v~~G-~~~~~V~~tG~~T~~g~i~~l~~ 233 (923)
|.+++||.+++. .+.|+|++||.+|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 345667777776 49999999999997421 1112
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhccc-c---------------------c---h----HHHHHHH
Q 002430 234 STNQVGHFQKVLTAIGNFCICSIAVGIVAEIII--MYPVQH-R---------------------K---Y----RDGIDNL 282 (923)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~~~-~---------------------~---~----~~~~~~~ 282 (923)
...+.+++++.+|++..+++++.++.+++..+. .|.... . + + ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 224789999999998876544333322222222 121100 0 0 0 1123334
Q ss_pred HHHHHhhccCchhHHHHHHHHHHHhhhhcCC----------ceeccCchhhhccCceEEEecCCCccccCcceeeeeeee
Q 002430 283 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352 (923)
Q Consensus 283 ~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~----------ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 352 (923)
++++...||++|++++++++..++..+.++. +.||+.+.+|+||+|++||+|||||||+|+|+++++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 5677799999999999999988888887765 789999999999999999999999999999999999873
Q ss_pred ecccC-----------------------------------------CC-h-----HHHHH-HHHHHcccc----------
Q 002430 353 VFAKG-----------------------------------------VE-K-----EHVIL-LAARASRTE---------- 374 (923)
Q Consensus 353 ~~~~~-----------------------------------------~~-~-----~~~l~-~a~~~~~~~---------- 374 (923)
+..++ .+ + .+.+. ++.|++...
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 21110 00 0 11223 333332211
Q ss_pred -------CcchHHHHHHHhcCC----------------hhhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcH
Q 002430 375 -------NQDAIDAAIVGMLAD----------------PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAP 431 (923)
Q Consensus 375 -------~~~~~~~ai~~~~~~----------------~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~ 431 (923)
..+|.|.|++.++.+ ....+..|++++.+||+|+|||||+++++++|++++++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 126899999887632 122456789999999999999999999988888999999999
Q ss_pred HHHHHhccCC--hhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-------------------------CCCCCCceE
Q 002430 432 EQILALCNCR--EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQL 484 (923)
Q Consensus 432 e~il~~~~~~--~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~-------------------------~~~e~~l~l 484 (923)
|.|+++|+.. +..++++++++++|+++|+|||++|||.+++++. +.+|.+|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999742 3567788999999999999999999999975421 346899999
Q ss_pred EEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcc----------------------
Q 002430 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL---------------------- 542 (923)
Q Consensus 485 lG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l---------------------- 542 (923)
+|+++++||||++++++|++|+++||+|||+|||+.+||++||++|||.++....-.+
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999997643211011
Q ss_pred -------------------------cCcccccccC---cchHHHHhhhcC--eEEecChhhHHHHHHHHhhC-CCEEEEE
Q 002430 543 -------------------------LGQDKDASIA---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMT 591 (923)
Q Consensus 543 -------------------------~~~~~~~~~~---~~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~-g~~V~m~ 591 (923)
.|...+..++ .+.+.+++.+++ ||||++|+||+++|+.+|++ +++|+||
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 1110000001 123445555555 79999999999999999997 6899999
Q ss_pred cCCccChHhhhcCCeeeEe-c-cchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 592 GDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669 (923)
Q Consensus 592 GDG~NDapaLk~AdVGIam-g-~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~ 669 (923)
|||+||+||||+|||||++ | +|.+|++ |||+++.++++..-+.++ |||+.|+|+.+.+.|.+++|+.+++..+++.
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~qA~~-aSDfaI~~Fr~L~rLLlv-HGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~ 955 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQAVM-ASDFAMGQFRFLVPLLLV-HGHWNYQRMGYMILYNFYRNAVFVLVLFWYV 955 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHHHHH-hhccchhhhHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 5 6777666 999999888776665555 9999999999999999999999999999988
Q ss_pred HhhcCC----CcHHHHHHHHHHh-cccccccc-cCCCCCC----CCC---------CchhHHHHHHHHHHHHHHHHHHHH
Q 002430 670 LIWKFD----FSPFMVLIIAILN-DGTIMTIS-KDRVKPS----PQP---------DSWKLKEIFATGVVLGSYLAIMTV 730 (923)
Q Consensus 670 ~~~~~~----~~~~~il~i~l~~-d~~~~~l~-~~~~~~~----~~p---------~~~~~~~~~~~~~~~g~~~~~~~~ 730 (923)
++.+|. +.++.+.+.|++. .++++.++ +|+.-+. ..| ..++ .+.|+.+++.|+++++++|
T Consensus 956 ~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n-~~~F~~w~~~~i~qs~iif 1034 (1178)
T PLN03190 956 LFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYN-SKLFWLTMIDTLWQSAVVF 1034 (1178)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccC-HHHHHHHHHHHHHHHHHHH
Confidence 876654 4455555555544 44455553 4443221 112 2222 3456667888999999888
Q ss_pred HHHHHHHhccccccccCccccCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHh-
Q 002430 731 VFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVY- 809 (923)
Q Consensus 731 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~- 809 (923)
++.++.+.... .+ .....+++++.++++.++.++ ..+++|.|...... ++++++..+...++...
T Consensus 1035 f~~~~~~~~~~----~~-------~~~~~~~~~~~~v~~vnl~i~-~~~~~wt~~~~~~i--~~Si~~~~i~~~~~~~~~ 1100 (1178)
T PLN03190 1035 FVPLFAYWAST----ID-------GSSIGDLWTLAVVILVNLHLA-MDIIRWNWITHAAI--WGSIVATFICVIVIDAIP 1100 (1178)
T ss_pred HHHHHHhcCCC----cC-------ceeEhHhhhhHHHHHHHHHHH-HHHhhhhHHHHHHH--HHHHHHHHHHHHHHHhcc
Confidence 66555442211 01 001224445555555555433 34445655433322 22222111111111100
Q ss_pred --hc-ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Q 002430 810 --AN-WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKA 854 (923)
Q Consensus 810 --~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~ 854 (923)
.. +.+..+ ...+.+|+.+++..++.++++.++|++++.++|...
T Consensus 1101 ~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~ 1147 (1178)
T PLN03190 1101 TLPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDV 1147 (1178)
T ss_pred cchhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 00 111111 123557777788888889999999999999988663
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-98 Score=877.61 Aligned_cols=546 Identities=22% Similarity=0.341 Sum_probs=453.5
Q ss_pred HHhhchHHHHHHHHHHHHHHHhcCCC--CCCch--hhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhcCCC-cEE
Q 002430 68 GFMWNPLSWVMEAAAIMAIALANGGG--RDPDW--QDFVGIIVLLVINSTISFIE----ENNAGNAAAALMANLAP-KTK 138 (923)
Q Consensus 68 ~~~~~~~~~~l~~~ail~~~l~~~~~--~~~~~--~~~~~i~~~~~~~~~~~~~~----e~~~~~~~~~l~~~~~~-~~~ 138 (923)
.+|+||+.|+++++++++++++.... ....| .+.+.|.++++++.+++.++ |+|+++++++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 46899999999999999998763110 01112 45677778888888888777 78999999999998886 776
Q ss_pred -EEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC---CcccccceeecCeEEE
Q 002430 139 -VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEA 214 (923)
Q Consensus 139 -V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~---~~v~~Gt~v~~G~~~~ 214 (923)
|.|||++++|++++|+|||+|.|++||+|||||++++| ...||||+|||||.|+.|++| +.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 78999999999999999999999999999999999999 579999999999999999999 8899999999999999
Q ss_pred EEEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCc
Q 002430 215 VVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIA 293 (923)
Q Consensus 215 ~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~ 293 (923)
+|+++|.+|++||+.++++.++ +++|+|.....+...+.++++ +++.++..+ ....++...+...+++++++|||+
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l--~~~~~~~~~-~~~~~~~~~~~~~val~V~~IP~a 263 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFL--VVILTMYPL-AKFLNFNLSIAMLIALAVCLIPTT 263 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHH--HHHHHHHHH-HhhccHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999998874 788998766554432221111 111111111 111234456677888889999999
Q ss_pred hhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccc
Q 002430 294 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT 373 (923)
Q Consensus 294 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~ 373 (923)
||..++++.+.|+++|+|+|+++|+++++|++|++|++|||||||||+|++.+.+... ..+.+.++++..++.++..
T Consensus 264 L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~~ 340 (673)
T PRK14010 264 IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSIA 340 (673)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999998777665431 2244556677776666654
Q ss_pred cCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCCh-hHHHHHHHHH
Q 002430 374 ENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKVHAVI 452 (923)
Q Consensus 374 ~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~~i 452 (923)
. .||++.|++.++..... .......+++||++.+|+|++.+ +|+ .+.||+|+.++++|+... ..+..+++.+
T Consensus 341 s-~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 341 D-DTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred C-CChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 4 49999999987642110 00011235689999999999864 343 466999999999997421 2234466777
Q ss_pred HHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCC
Q 002430 453 DKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532 (923)
Q Consensus 453 ~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi 532 (923)
++++++|+|+++++. +++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||
T Consensus 414 ~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 414 KGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred HHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 889999999999874 3489999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEecc
Q 002430 533 GTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (923)
Q Consensus 533 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~ 612 (923)
. ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||||+
T Consensus 481 ~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 481 D------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred c------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 4 2699999999999999999999999999999999999999999999999
Q ss_pred chHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 613 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL 670 (923)
Q Consensus 613 gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~ 670 (923)
|||+||++||+||+||||++|++++++||++|.|+++++.|.++.|+..++..+...|
T Consensus 531 GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987766554443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-94 Score=848.31 Aligned_cols=538 Identities=24% Similarity=0.320 Sum_probs=452.9
Q ss_pred HHHhhchHHHHHHHHHHHHHHHhcCC----C---CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-cEE
Q 002430 67 LGFMWNPLSWVMEAAAIMAIALANGG----G---RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KTK 138 (923)
Q Consensus 67 l~~~~~~~~~~l~~~ail~~~l~~~~----~---~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~-~~~ 138 (923)
-.||+||+.++++++++++++++... + ....|...+.+++.+++...++.++|+|+++++++|++..+. +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 35899999999999999999986311 1 112344445555666677777889999999999999998875 799
Q ss_pred EEeCCe-EEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCc---ccccceeecCeEEE
Q 002430 139 VLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIEA 214 (923)
Q Consensus 139 V~Rdg~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~---v~~Gt~v~~G~~~~ 214 (923)
|+|||+ +++|++++|+|||+|.|++||.|||||++++| ...||||+|||||.||.|++|+. +|+||.|.+|++.+
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 99999999999999999999999999999999 58999999999999999999988 99999999999999
Q ss_pred EEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCc
Q 002430 215 VVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIA 293 (923)
Q Consensus 215 ~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~ 293 (923)
+|+++|.+|++||+.++++.+ .+++|+|..++.+...+..++++.++..+.+.++ .+.. .++..++++++++|||+
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~a 263 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTT 263 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccch
Confidence 999999999999999999887 4678999887776655433222222221112221 1222 36788899999999999
Q ss_pred hhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccc
Q 002430 294 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT 373 (923)
Q Consensus 294 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~ 373 (923)
|+..++++...|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|.+.++.. ..+.+.++++..++.++..
T Consensus 264 lg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~ 340 (679)
T PRK01122 264 IGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLA 340 (679)
T ss_pred hhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999988652 2356677788877777665
Q ss_pred cCcchHHHHHHHhcCCh---hhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCC-hhHHHHHH
Q 002430 374 ENQDAIDAAIVGMLADP---KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVH 449 (923)
Q Consensus 374 ~~~~~~~~ai~~~~~~~---~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 449 (923)
.+ ||.+.|++.++... ......++..+++||++.++++++.+ +| ..++||++|.+++.|+.. ...+++++
T Consensus 341 s~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~ 414 (679)
T PRK01122 341 DE-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELD 414 (679)
T ss_pred CC-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHH
Confidence 54 89999998876431 11111245677899999988887643 35 578999999999999642 23456778
Q ss_pred HHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH
Q 002430 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (923)
Q Consensus 450 ~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~ 529 (923)
+.+++++++|+|++++|++ ++++|+++++||+|||++++|++||++||+++|+||||+.||.+||++
T Consensus 415 ~~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e 481 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE 481 (679)
T ss_pred HHHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 8889999999999999974 389999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE
Q 002430 530 LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (923)
Q Consensus 530 ~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa 609 (923)
+||+ ++|||++||||+++|+.+|++|++|+|||||+||+|||++||||||
T Consensus 482 lGId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIA 531 (679)
T PRK01122 482 AGVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVA 531 (679)
T ss_pred cCCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9984 2699999999999999999999999999999999999999999999
Q ss_pred eccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 002430 610 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660 (923)
Q Consensus 610 mg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~ 660 (923)
||+|||+||++||+||+||||++|++++++||++.-.--....|++..-+.
T Consensus 532 MgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~ 582 (679)
T PRK01122 532 MNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVA 582 (679)
T ss_pred eCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHH
Confidence 999999999999999999999999999999999984444556666654443
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-91 Score=797.07 Aligned_cols=702 Identities=22% Similarity=0.332 Sum_probs=523.5
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHH
Q 002430 26 EVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGII 105 (923)
Q Consensus 26 ~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~ 105 (923)
+.........+||+.+++.+|+..||+|.+..+.++.+..++++..+|+ +++.+..+.-|... .+++.+..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~d------~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLAD------SYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhcc------cchhhhhHHH
Confidence 3344444457899999999999999999999999999999999999999 66776666655532 2555666677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeC-CCeeccceEEEecCCeEEEec
Q 002430 106 VLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL-GDIVPADARLLEGDPLKIDQS 184 (923)
Q Consensus 106 ~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~-Gd~IPaD~~ll~g~~~~Vdes 184 (923)
++.+.+...+.+|.++..+.+..+-+ ....++|+|||.|++|+++|||||||+.+.+ |-..|||++|++| +|.||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeecc
Confidence 77788888899999999888877543 4468999999999999999999999999998 8999999999999 6999999
Q ss_pred cccCCCcceecCCC-------------------Ccccccceeec------CeEEEEEEEecchhhHHhHHhhhhccCCCC
Q 002430 185 ALTGESLPVTKNPY-------------------DEVFSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQVG 239 (923)
Q Consensus 185 ~LTGEs~pv~K~~~-------------------~~v~~Gt~v~~------G~~~~~V~~tG~~T~~g~i~~l~~~~~~~~ 239 (923)
+|||||.||.|.+. +.+|+||.+.+ |.+.++|++||.+|..|++.+.+-.++ +.
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPk-P~ 378 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPK-PV 378 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCC-Cc
Confidence 99999999999874 46899999986 569999999999999998887665543 22
Q ss_pred cHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceec
Q 002430 240 HFQKVLTAI--GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (923)
Q Consensus 240 ~~~~~~~~i--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 317 (923)
+++-.-+.+ ..++.++.+++.+. .++.+...+.+....+..++.++.+.+|+|||.++++....+..||.|+||+|-
T Consensus 379 ~fkfyrds~~fi~~l~~ia~~gfiy-~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCi 457 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVIIALIGFIY-TAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCI 457 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHH-HhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEc
Confidence 333222322 22222222221221 112223456788889999999999999999999999999999999999999999
Q ss_pred cCchhhhccCceEEEecCCCccccCcceeeeeeeeecc---c---------------------CCCh--HHHHHHHHHHc
Q 002430 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---K---------------------GVEK--EHVILLAARAS 371 (923)
Q Consensus 318 ~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~---~---------------------~~~~--~~~l~~a~~~~ 371 (923)
+++.+...|++|++|||||||||++.+.+..+....-+ . ...+ .....+|.|++
T Consensus 458 sP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHS 537 (1140)
T KOG0208|consen 458 SPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHS 537 (1140)
T ss_pred CccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhce
Confidence 99999999999999999999999999998765531100 0 0001 11222233332
Q ss_pred cc-----cCcchHHHHHHHhcC------------------------Chhh--------hh-cCceeEEeecCCCCCcceE
Q 002430 372 RT-----ENQDAIDAAIVGMLA------------------------DPKE--------AR-AGVREVHFLPFNPVDKRTA 413 (923)
Q Consensus 372 ~~-----~~~~~~~~ai~~~~~------------------------~~~~--------~~-~~~~~l~~~~F~s~~k~~s 413 (923)
.. -.+||+|..+.+..+ +|.+ .. ..+.+++.+||+|.-+|||
T Consensus 538 L~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMS 617 (1140)
T KOG0208|consen 538 LTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMS 617 (1140)
T ss_pred eEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEE
Confidence 11 135777655443221 1111 01 1477889999999999999
Q ss_pred EEEEec-CCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCC--------CCCCCCCCceE
Q 002430 414 LTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQL 484 (923)
Q Consensus 414 v~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~--------~~~~~e~~l~l 484 (923)
|++.++ +.+..+|+|||||.|.+.|+ .+.+++.+++.+++|+.+|+|++|+|+|.++.. .++..|.+|+|
T Consensus 618 VIv~~~~e~~~~~ftKGaPE~I~~ic~-p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~F 696 (1140)
T KOG0208|consen 618 VIVSTGGEDKMMVFTKGAPESIAEICK-PETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEF 696 (1140)
T ss_pred EEEecCCCCceEeeccCCHHHHHHhcC-cccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhcccee
Confidence 999875 46789999999999999998 467788999999999999999999999999876 36788999999
Q ss_pred EEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCC----------Cc-------------
Q 002430 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS----------SS------------- 541 (923)
Q Consensus 485 lG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~----------~~------------- 541 (923)
+|++.||+++|++++.+|++|++|.||++|+||||..||..+||+|||....... ..
T Consensus 697 lGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~ 776 (1140)
T KOG0208|consen 697 LGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQT 776 (1140)
T ss_pred eEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCcc
Confidence 9999999999999999999999999999999999999999999999996521100 00
Q ss_pred -ccC----------cc----------cccccCc-----------chHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEE
Q 002430 542 -LLG----------QD----------KDASIAA-----------LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICG 589 (923)
Q Consensus 542 -l~~----------~~----------~~~~~~~-----------~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~ 589 (923)
..+ .. -.-.+++ +.+++++.+.+|||||+|+||.++|+.||+.|+.|+
T Consensus 777 ~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vg 856 (1140)
T KOG0208|consen 777 QFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVG 856 (1140)
T ss_pred ccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEE
Confidence 000 00 0001222 235667778899999999999999999999999999
Q ss_pred EEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 590 MTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669 (923)
Q Consensus 590 m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~ 669 (923)
|||||+||+.|||+|||||+++++. |.-||.+.---++.+.+++.|++||..+..--..+.|...+.+..++..++ +
T Consensus 857 fCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~-L 933 (1140)
T KOG0208|consen 857 FCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVF-L 933 (1140)
T ss_pred ecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhe-e
Confidence 9999999999999999999998543 445788887778999999999999998777666777766555443332221 1
Q ss_pred HhhcCCCcHHHHHHHHHHhccc-cccccc----CCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 002430 670 LIWKFDFSPFMVLIIAILNDGT-IMTISK----DRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFF 742 (923)
Q Consensus 670 ~~~~~~~~~~~il~i~l~~d~~-~~~l~~----~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 742 (923)
..-+..++.+|.+++.++-..+ +..++. ++..+.|+|.+.-.++.+.--+.+-++..++-+..+++....+|+
T Consensus 934 Y~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~ 1011 (1140)
T KOG0208|consen 934 YLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWY 1011 (1140)
T ss_pred eeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhhhhHHHHHHHHHHHHhhheeeccccce
Confidence 2235678888999888876544 334433 233334444443333333332222222333333333444444554
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-89 Score=806.54 Aligned_cols=542 Identities=23% Similarity=0.323 Sum_probs=454.4
Q ss_pred HHhhchHHHHHHHHHHHHHHHhcC----C--CCCCchhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-cE
Q 002430 68 GFMWNPLSWVMEAAAIMAIALANG----G--GRDPDWQDF---VGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KT 137 (923)
Q Consensus 68 ~~~~~~~~~~l~~~ail~~~l~~~----~--~~~~~~~~~---~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~-~~ 137 (923)
.||.||+.++++++++++++++.. + +....|++. +.+++.+++...++.++|+|++++.++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 478999999999999999997531 1 111246654 3344456777788889999999999999998877 48
Q ss_pred EEEe-CCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCc---ccccceeecCeEE
Q 002430 138 KVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIE 213 (923)
Q Consensus 138 ~V~R-dg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~---v~~Gt~v~~G~~~ 213 (923)
+|+| ||++++|++++|+|||+|.|++||+|||||++++| .+.||||+|||||.||.|++|+. +|+||.+.+|++.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 99999999999999999999999999999999999 68999999999999999999975 8999999999999
Q ss_pred EEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccC
Q 002430 214 AVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 292 (923)
Q Consensus 214 ~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~ 292 (923)
++|+++|.+|++||+.++++.+ .+++|+|..++.+..++.+++++..+. +..+..+. .....+...+++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCch
Confidence 9999999999999999999887 467899988877665543322221111 11111111 1223567778999999999
Q ss_pred chhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHcc
Q 002430 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (923)
Q Consensus 293 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~ 372 (923)
+|+...+.....|+.+|+++|+++|++.++|+||++|+||||||||||+|+|++.++.. ..+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcC
Confidence 88877777777899999999999999999999999999999999999999999988752 235667788888877766
Q ss_pred ccCcchHHHHHHHhcCChh--hhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCC-hhHHHHHH
Q 002430 373 TENQDAIDAAIVGMLADPK--EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVH 449 (923)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~--~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 449 (923)
.. .||.+.|++.++.... .....++..++.||++.++++++.+. +| ..++||+||.+++.|+.. ...++.++
T Consensus 341 ~s-~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 AD-DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred CC-CCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 54 4899999988764211 11112345678999999877765432 45 578999999999988532 23346678
Q ss_pred HHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH
Q 002430 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (923)
Q Consensus 450 ~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~ 529 (923)
+.+++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+|||+..||.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88899999999999999853 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE
Q 002430 530 LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (923)
Q Consensus 530 ~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa 609 (923)
+|+. +++||++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 483 lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9984 2699999999999999999999999999999999999999999999
Q ss_pred eccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 610 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 664 (923)
Q Consensus 610 mg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 664 (923)
|++|+++|+++||++++||||++|+.++++||+++-+......|+++.++.-++.
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~ 587 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFA 587 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHH
Confidence 9999999999999999999999999999999999999999999998887765443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-92 Score=851.23 Aligned_cols=791 Identities=18% Similarity=0.208 Sum_probs=580.7
Q ss_pred HHhhcCCCccCcccccHH----HHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 002430 46 RLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121 (923)
Q Consensus 46 r~~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~ 121 (923)
+..+|-.|.+.+.|++++ +.+++||.++.|++|++.++++++. .. +...|...+++++++.++++.+.+++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~--~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS--PFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc--ccCccceeeceeeeehHHHHHHHHhhhh
Confidence 556999999999998764 7889999999999999999999986 22 4457788889999999999999999999
Q ss_pred HHHHHHHHhhcCCCcEEEEeCCe-EEEEeCCCCCCCcEEEEeCCCeeccceEEEecC----CeEEEeccccCCCcceecC
Q 002430 122 AGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKN 196 (923)
Q Consensus 122 ~~~~~~~l~~~~~~~~~V~Rdg~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~ 196 (923)
+++....++ ..++.|.|++. +++..|++|++||+|++..++.+|||.+|++++ .|+|++++|+||++++.|+
T Consensus 105 R~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 999887654 47889998644 899999999999999999999999999999653 4999999999999999886
Q ss_pred CC-----------------------------------------------CcccccceeecCe-EEEEEEEecchhhHHhH
Q 002430 197 PY-----------------------------------------------DEVFSGSTCKQGE-IEAVVIATGVHTFFGKA 228 (923)
Q Consensus 197 ~~-----------------------------------------------~~v~~Gt~v~~G~-~~~~V~~tG~~T~~g~i 228 (923)
.. +++++|+++++++ +.++|+.||++|++++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 41 3577889998886 79999999999987643
Q ss_pred HhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhcc---c--------c-----chHHHHHHHHHHHHhhc
Q 002430 229 AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIM--YPVQ---H--------R-----KYRDGIDNLLVLLIGGI 290 (923)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~--~~~~---~--------~-----~~~~~~~~~~~lli~~i 290 (923)
... ...+.+.+++.++.+...++++++..+++..+.. |... . . .....+..+++++...+
T Consensus 262 ~~~--~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 SGK--PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred cCC--CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 222 3357788899888876654443333222222111 1110 0 0 01123566788899999
Q ss_pred cCchhHHHHHHHHHHHhhhh----------cCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCCh
Q 002430 291 PIAMPTVLSVTMAIGSHRLS----------QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360 (923)
Q Consensus 291 P~~L~~~~~~~~~~~~~~l~----------~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~ 360 (923)
|++|++.+++....++..+. ...+.+|+.+..|+||+|++|++|||||||+|.|++.+|.+.+..++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 99999999999999884443 35789999999999999999999999999999999999998654333211
Q ss_pred H--------------------------------------------HHH-HHHHHHcccc------------CcchHHHHH
Q 002430 361 E--------------------------------------------HVI-LLAARASRTE------------NQDAIDAAI 383 (923)
Q Consensus 361 ~--------------------------------------------~~l-~~a~~~~~~~------------~~~~~~~ai 383 (923)
+ +.. .+|.+++..+ .+.|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 0 112 2222222111 125667777
Q ss_pred HHhcCCh---------h-------hhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhcc-CChhHHH
Q 002430 384 VGMLADP---------K-------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-CREDVRK 446 (923)
Q Consensus 384 ~~~~~~~---------~-------~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~-~~~~~~~ 446 (923)
+..+.+. + .....|+.++.++|+|.||||||++++++|+..++||||+.+|++++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 7655321 0 013578999999999999999999999999999999999999999998 5567788
Q ss_pred HHHHHHHHHHHcCCeEEEEEeeecCCCCC-------------------------CCCCCCceEEEEeccCCCCCccHHHH
Q 002430 447 KVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQLVGLLPLFDPPRHDSAET 501 (923)
Q Consensus 447 ~~~~~i~~~a~~GlR~l~~A~~~~~~~~~-------------------------~~~e~~l~llG~i~i~D~lr~~~~~~ 501 (923)
+.++++++||.+|+||||+|||+++++++ +.+|++|+++|.+++||++|+|||++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 89999999999999999999999987652 35799999999999999999999999
Q ss_pred HHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCccc--------------------------------------
Q 002430 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-------------------------------------- 543 (923)
Q Consensus 502 I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~-------------------------------------- 543 (923)
|+.|++||||+||+|||+.+||.+||.+|++.++.+..-.+.
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 999999999999999999999999999999976533211111
Q ss_pred -------CcccccccCcch---HHHHhh--hcCeEEecChhhHHHHHHHHhhC-CCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 544 -------GQDKDASIAALP---VDELIE--KADGFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 544 -------~~~~~~~~~~~~---~~~~~~--~~~vfar~sP~~K~~iV~~lq~~-g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
|......+++++ +-++.. +..+|||++|.||+.+|+..++. +.+++++|||+||++|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 000000111111 112221 34699999999999999999854 89999999999999999999999999
Q ss_pred c--cchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC----cHHHHHHH
Q 002430 611 A--DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDF----SPFMVLII 684 (923)
Q Consensus 611 g--~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~----~~~~il~i 684 (923)
+ +|.+|++ +||+.+.+++|...+.+| ||||.|.|+.+++.|.+++|+.+.+..+++.++.+|.. .++.+.+.
T Consensus 820 sG~EGmQAvm-sSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhhh-cccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 4 7887777 999999999999988877 99999999999999999999999999999988766533 33333333
Q ss_pred HHHh-cccccccccCCCCCC--------------CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCcc
Q 002430 685 AILN-DGTIMTISKDRVKPS--------------PQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVR 749 (923)
Q Consensus 685 ~l~~-d~~~~~l~~~~~~~~--------------~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 749 (923)
|++. ..+++.++.-..+.+ +....++ .+.|+.+++.|+++++++|++++..+... .....|
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~-~~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~~~~G-- 973 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFN-WKRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AVTSNG-- 973 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccc-hHHHHHHHHHHHHhheeeeeeeHhhheee-eeccCC--
Confidence 3333 333455543222211 1112233 34566677889999999998777666422 111111
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHhhc-----------ccccccc
Q 002430 750 SLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYAN-----------WSFARIE 818 (923)
Q Consensus 750 ~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 818 (923)
...+.....+.+|+.+++...+. ....+.+|.|.+... +++.++...++++ +|.. .++....
T Consensus 974 -~~~d~~~~G~~~~T~~Vivv~~~-iaL~~~ywT~i~~i~---i~gSi~~~f~f~~--iy~~~~~~~~~~~~~~~~~~~~ 1046 (1151)
T KOG0206|consen 974 -LTADYWTLGTTVFTIIVIVVNLK-IALETSYWTWINHIV---IWGSILLWFVFLF--IYSELTPAISTPDPFYGVAEHL 1046 (1151)
T ss_pred -CcCChhhccceEEEEEEEEEEee-eeeeehheeHHHHHH---HHHHHHHHHHHHH--HHhccccccCCCccHHHHHHHH
Confidence 11122223344454444433333 223334566554432 2222222222111 2210 1112233
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhh
Q 002430 819 GCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDT 857 (923)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~ 857 (923)
..+..+|+++++.+++.++++.++|.+++.++|.+....
T Consensus 1047 ~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i 1085 (1151)
T KOG0206|consen 1047 LSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDII 1085 (1151)
T ss_pred hcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHH
Confidence 345568888899999999999999999999999985443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-86 Score=777.51 Aligned_cols=505 Identities=28% Similarity=0.395 Sum_probs=440.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEe-CCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEe
Q 002430 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (923)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R-dg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~ 175 (923)
+|.+++++++++++...++.+...|+++++++|++..|.++++++ ||++++||.++|+|||+|.|++||+||+||++++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 347788888999999999999999999999999999999997776 5669999999999999999999999999999999
Q ss_pred cCCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHH
Q 002430 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCIC 254 (923)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~ 254 (923)
| ...||||+|||||.||.|.+||.|++||.+.+|.....|+++|.+|.+++|.++++++ .++++.|+..++++.+++.
T Consensus 253 G-~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 G-SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred C-cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 9 5689999999999999999999999999999999999999999999999999999988 4889999999999999887
Q ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEec
Q 002430 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (923)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~D 334 (923)
.+++..++.++++++....+|..++..++++++++|||+|.+++|++...|..+.+++|+++|+.+++|.++++|+++||
T Consensus 332 ~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFD 411 (713)
T COG2217 332 VVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFD 411 (713)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEe
Confidence 55554555555343344468889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEE
Q 002430 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (923)
Q Consensus 335 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv 414 (923)
||||||+|+++|.++.. .. + ++++++.+++..+..++ ||+..||++++.+.. ....+..+.+|- +....
T Consensus 412 KTGTLT~G~p~v~~v~~--~~-~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G----~Gv~~ 480 (713)
T COG2217 412 KTGTLTEGKPEVTDVVA--LD-G-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPG----RGVEA 480 (713)
T ss_pred CCCCCcCCceEEEEEec--CC-C-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeecc----CcEEE
Confidence 99999999999998763 22 3 77889999988877766 999999999664321 111222333331 11111
Q ss_pred EEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCC
Q 002430 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (923)
Q Consensus 415 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~l 494 (923)
..+| ..+..|++..+.+.-. +... ..+..+.+.++|..++.++... +++|+++++|++
T Consensus 481 ---~v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~ 538 (713)
T COG2217 481 ---EVDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADEL 538 (713)
T ss_pred ---EECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCC
Confidence 1256 4667799998764221 1111 4566778888999988898875 899999999999
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhH
Q 002430 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (923)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K 574 (923)
|||++++|++||+.|+++.|+||||..+|.+||+++||+. ++|.+.||||
T Consensus 539 R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------------------v~AellPedK 588 (713)
T COG2217 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------------------VRAELLPEDK 588 (713)
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh------------------------------heccCCcHHH
Confidence 9999999999999999999999999999999999999942 6999999999
Q ss_pred HHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHH
Q 002430 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (923)
Q Consensus 575 ~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 654 (923)
.++|+.||++|++|+|+|||+||+|||++||||||||+|||+|+++||++|++++++.++.+++.+|+++++||+|+.|+
T Consensus 589 ~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A 668 (713)
T COG2217 589 AEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWA 668 (713)
T ss_pred HHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002430 655 VSITIRIVLGF 665 (923)
Q Consensus 655 ~~~ni~~~~~~ 665 (923)
+.+|...+...
T Consensus 669 ~~yn~~~iplA 679 (713)
T COG2217 669 FGYNAIAIPLA 679 (713)
T ss_pred HHHHHHHHHHH
Confidence 99998655543
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-81 Score=758.29 Aligned_cols=499 Identities=26% Similarity=0.363 Sum_probs=437.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEec
Q 002430 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (923)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 176 (923)
.|.++++++++++++..++.++++|+++.+++|+++.|++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 68888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHHH
Q 002430 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 255 (923)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~~ 255 (923)
...||||+|||||.|+.|++||.+|+||.+.+|.+.++|+++|.+|.+|||.++++++ .+++++|+.+++++.+++..
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999887 47899999999999998766
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecC
Q 002430 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (923)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DK 335 (923)
++++.++.+++++.+.+.+|..++..++++++++|||+|.+++|++...+..+++|+|+++|+.+++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 66545544444434456678888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEEE
Q 002430 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (923)
Q Consensus 336 TGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv~ 415 (923)
|||||+|+|+|.++.. ..+.++++++.+++..+.. ..||++.|+++++... +. .+||.+..+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~-s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQG-STHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999988753 2346677888877665544 4599999999876421 11 24666666554321
Q ss_pred -EE-ecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCC
Q 002430 416 -YI-DSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (923)
Q Consensus 416 -~~-~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~ 493 (923)
++ ..+|+. +..|+|+.+.+ ..+.+.+.++++..+|+|+++++++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 11 235643 44589988754 11334555678899999999999854 89999999999
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhh
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 573 (923)
+|||++++|++|+++|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999983 267789999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHH
Q 002430 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (923)
Q Consensus 574 K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 653 (923)
|.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|+++++++||++++++++..++.++++||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 002430 654 AVSITIRIVL 663 (923)
Q Consensus 654 ~~~~ni~~~~ 663 (923)
++.+|+..+.
T Consensus 697 a~~~n~~~i~ 706 (741)
T PRK11033 697 ALGLKAIFLV 706 (741)
T ss_pred HHHHHHHHHH
Confidence 9999975443
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-81 Score=719.17 Aligned_cols=535 Identities=24% Similarity=0.330 Sum_probs=450.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCe-EEEEeCCCCCCCcEEEEeCCCeeccceEEEecCC
Q 002430 100 DFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDP 178 (923)
Q Consensus 100 ~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~ 178 (923)
...+++.++.+...++.....|+..++..|++..|.++.++.+|+ .++||.+.|++||+|.|++|++||+||++++| +
T Consensus 343 t~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~G-s 421 (951)
T KOG0207|consen 343 TSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDG-S 421 (951)
T ss_pred ccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeC-c
Confidence 445566677777788888888888999999999999999999997 89999999999999999999999999999999 5
Q ss_pred eEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHHHHHHHHHH
Q 002430 179 LKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIA 257 (923)
Q Consensus 179 ~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~ 257 (923)
++||||.+|||+.||.|++|+.|.+||.+.+|.....++++|.+|.+++|.+++++++ .+.|.|+.+|+++.+++..++
T Consensus 422 s~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi 501 (951)
T KOG0207|consen 422 SEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVI 501 (951)
T ss_pred eeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhh
Confidence 8999999999999999999999999999999999999999999999999999999985 889999999999999876666
Q ss_pred HHHHHHHHHHHhccc----------cchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccC
Q 002430 258 VGIVAEIIIMYPVQH----------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 327 (923)
Q Consensus 258 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~ 327 (923)
+..++.++++..+.. ..+..++..++++++++|||+|.++.|++...|....+++|+++|..+++|.+.+
T Consensus 502 ~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hk 581 (951)
T KOG0207|consen 502 VLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHK 581 (951)
T ss_pred HHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhc
Confidence 545444444333222 3455678888999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCC
Q 002430 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (923)
Q Consensus 328 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s 407 (923)
++++.||||||||+|++.|.++.. .....+..+++.+++..+... .||+..|++.++.........-..+++..|..
T Consensus 582 v~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~S-eHPig~AIv~yak~~~~~~~~~~~~~~~~~pg 658 (951)
T KOG0207|consen 582 VKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGS-EHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPG 658 (951)
T ss_pred CCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCC-cCchHHHHHHHHHhcccccCccccceeecccC
Confidence 999999999999999999998774 333356666776666555444 49999999999864332111112223333333
Q ss_pred CCcceEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEE
Q 002430 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (923)
Q Consensus 408 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~ 487 (923)
..+...+. .+|+. ++-|.-+.+... .....+.++..+++....|..+.+++... +++|+
T Consensus 659 ~g~~~~~~---~~~~~--i~iGN~~~~~r~---~~~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l~gv 717 (951)
T KOG0207|consen 659 EGIYVTVT---VDGNE--VLIGNKEWMSRN---GCSIPDDILDALTESERKGQTVVYVAVNG-------------QLVGV 717 (951)
T ss_pred CCcccceE---EeeeE--EeechHHHHHhc---CCCCchhHHHhhhhHhhcCceEEEEEECC-------------EEEEE
Confidence 33221111 23433 677888887652 22234457777888889999999999987 89999
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002430 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
+.++|++|||+..+|+.||+.||++.|+||||..+|+++|+++|+. +|||
T Consensus 718 ~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------~V~a 767 (951)
T KOG0207|consen 718 FALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------NVYA 767 (951)
T ss_pred EEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------eEEe
Confidence 9999999999999999999999999999999999999999999963 3799
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHH
Q 002430 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 647 (923)
Q Consensus 568 r~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i 647 (923)
.+.|+||.++|+.+|++++.|+|+|||+||+|||.+|||||+|+.|+++|.++||+||+.+++..++.++..+|++..|+
T Consensus 768 ev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rI 847 (951)
T KOG0207|consen 768 EVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRI 847 (951)
T ss_pred ccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHhc
Q 002430 648 KNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILND 689 (923)
Q Consensus 648 ~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~d 689 (923)
|.|+.|++.+|+..++...+.++.|++.++|++--....++.
T Consensus 848 k~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SS 889 (951)
T KOG0207|consen 848 KLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASS 889 (951)
T ss_pred HHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhh
Confidence 999999999999777766666666666678776554444443
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-80 Score=682.93 Aligned_cols=762 Identities=21% Similarity=0.258 Sum_probs=531.5
Q ss_pred HHHhhcCCCccCcccccHH----HHHHHHhhchHHHHHHHHHHHHHHHhcCCCC-CCchhhHHHHHHHHHHHHHHHHHHH
Q 002430 45 HRLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGR-DPDWQDFVGIIVLLVINSTISFIEE 119 (923)
Q Consensus 45 ~r~~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~e 119 (923)
.++++|.+|.+...|++++ ..+++||+..+++++++.++.+++.....+. ..+|...++++.+.++-..++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6778899999999887653 5677899999999999988888875433222 1244444444444444444444444
Q ss_pred HHHHHHHHHHhhcCCCcEEEE-eCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecC----CeEEEeccccCCCccee
Q 002430 120 NNAGNAAAALMANLAPKTKVL-RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVT 194 (923)
Q Consensus 120 ~~~~~~~~~l~~~~~~~~~V~-Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~~~Vdes~LTGEs~pv~ 194 (923)
+++.+ .++ ..+.+++ |||...+ |++++++||+|.+..+++||||.++|+.+ +|.|-+-.|+||+..+.
T Consensus 154 ~~rd~---~~N---se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDR---ELN---SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhh---hhh---hhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 44443 332 2444444 7776655 99999999999999999999999999532 69999999999998776
Q ss_pred cCC-----------------------------------------------CCcccccceeecCeEEEEEEEecchhhHHh
Q 002430 195 KNP-----------------------------------------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGK 227 (923)
Q Consensus 195 K~~-----------------------------------------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~ 227 (923)
|-| .|+++++|.+.+|.+.|+|++||.+|.-
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 644 1579999999999999999999999962
Q ss_pred HHhhhhcc---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHH
Q 002430 228 AAHLVDST---NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (923)
Q Consensus 228 i~~l~~~~---~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~ 304 (923)
.++.+ .+.+.++..+|.+.+++.+.+++..++ ++.....+.+|...+..++.++...||++|-+.+.+++.+
T Consensus 305 ---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 305 ---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred ---HhccCCcccccceeeeecccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 34433 366778888999888866554442222 2233345678888899999999999999999999999999
Q ss_pred HHhhhhcC----CceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCCh--------------------
Q 002430 305 GSHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK-------------------- 360 (923)
Q Consensus 305 ~~~~l~~~----~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~-------------------- 360 (923)
-++.+.++ |.++|..+.-|+||.++++.+|||||||+|+|.+++++.....++.+.
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 98888775 678999999999999999999999999999999999887533222111
Q ss_pred ---------------HHHHHHHHHHccccCcchHHHHHHHhcCChhhh-----------------------------hcC
Q 002430 361 ---------------EHVILLAARASRTENQDAIDAAIVGMLADPKEA-----------------------------RAG 396 (923)
Q Consensus 361 ---------------~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~-----------------------------~~~ 396 (923)
+.+..+|.|++..+.-+ .|..+...+.+|+|. ...
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e-~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~ 538 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFE-DDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELN 538 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccC-CCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCccee
Confidence 12233333333222100 000111223334331 247
Q ss_pred ceeEEeecCCCCCcceEEEEEec-CCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC
Q 002430 397 VREVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK 475 (923)
Q Consensus 397 ~~~l~~~~F~s~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~ 475 (923)
|++++.+||+|++|||.++++++ .|++..|.|||+-++....+. .+++++...+||++|+|||.+|.|.++++++
T Consensus 539 yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~ey 614 (1051)
T KOG0210|consen 539 YQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEY 614 (1051)
T ss_pred EEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHH
Confidence 89999999999999999999986 689999999999998876654 3577888899999999999999999987652
Q ss_pred C--------------------------CCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH
Q 002430 476 E--------------------------SPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (923)
Q Consensus 476 ~--------------------------~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~ 529 (923)
+ .+|.+++++|+++.||++|+|++.+++.||+|||||||+|||+.+||+.||++
T Consensus 615 e~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkS 694 (1051)
T KOG0210|consen 615 EAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKS 694 (1051)
T ss_pred HHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehh
Confidence 2 36899999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCccc---Ccc-------------c-ccccCcc-----------hHHHHhh--hcCeEEecChhhHHHHHH
Q 002430 530 LGMGTNMYPSSSLL---GQD-------------K-DASIAAL-----------PVDELIE--KADGFAGVFPEHKYEIVK 579 (923)
Q Consensus 530 ~Gi~~~~~~~~~l~---~~~-------------~-~~~~~~~-----------~~~~~~~--~~~vfar~sP~~K~~iV~ 579 (923)
.++......-.++. ... . .--++++ ++.++.. .+.|+||++|+||+++++
T Consensus 695 s~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~ 774 (1051)
T KOG0210|consen 695 SRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVR 774 (1051)
T ss_pred ccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHH
Confidence 99865322111110 000 0 0012332 3334333 345899999999999999
Q ss_pred HHhhC-CCEEEEEcCCccChHhhhcCCeeeEe-c-cchHHHhhccCEEecCCCchhHHHHHH-HhHHHHHHHHHHHHHHH
Q 002430 580 RLQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAV 655 (923)
Q Consensus 580 ~lq~~-g~~V~m~GDG~NDapaLk~AdVGIam-g-~gtd~A~~aADivl~~~~~~~i~~~i~-~gR~~~~~i~~~i~~~~ 655 (923)
.+|++ |..|+.+|||.||+.|+++||+||++ | +|.+|+. |||+.+++ |+.+-.++. |||..|+|-.+.-+|.+
T Consensus 775 llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL-AADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfVi 851 (1051)
T KOG0210|consen 775 LLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL-AADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVI 851 (1051)
T ss_pred HHHHhhCceEEEEcCCCccchheeecccceeeecccccccch-hccccHHH--HHHHHHHhhccccchHHHHHHHHHHHH
Confidence 99986 89999999999999999999999999 6 6766655 99999976 555555443 89999999999888876
Q ss_pred HHHHHHHHHHHHHHHh-hcCCCcH----HHHHHHHHHhcccccccccCCCCCC----CCCC---------chhHHHHHHH
Q 002430 656 SITIRIVLGFMLIALI-WKFDFSP----FMVLIIAILNDGTIMTISKDRVKPS----PQPD---------SWKLKEIFAT 717 (923)
Q Consensus 656 ~~ni~~~~~~~~~~~~-~~~~~~~----~~il~i~l~~d~~~~~l~~~~~~~~----~~p~---------~~~~~~~~~~ 717 (923)
-....+..+..++... +-.|.+- +++.+..+.+-.+..++-.|+.-.+ ..|+ ....+ -|..
T Consensus 852 HRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYK-tF~i 930 (1051)
T KOG0210|consen 852 HRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYK-TFFI 930 (1051)
T ss_pred hhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchh-hhhh
Confidence 6555444433333221 1111111 2333344444445566666654322 1122 22223 3445
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccCccccCCCHHHHHHHHHHHHHHHHHHH-hhhhccCCCCcccchhHHHHHHH
Q 002430 718 GVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQAL-IFVTRSRSWSFIERPGLLLATAF 796 (923)
Q Consensus 718 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~ 796 (923)
++++++|++.+.+..+++.+.+.|+ ...++.|..+++..... ++.+++ |.| .++.+-
T Consensus 931 wvLISiYQG~vim~g~~~l~~~ef~--------------~ivaisFtaLi~tELiMVaLtv~t--w~~------~m~vae 988 (1051)
T KOG0210|consen 931 WVLISIYQGSVIMYGALLLFDTEFI--------------HIVAISFTALILTELIMVALTVRT--WHW------LMVVAE 988 (1051)
T ss_pred hhhHHHHcccHHHHHHHHHhhhhhe--------------EeeeeeeHHHHHHHHHHHhhhhhh--hhH------HHHHHH
Confidence 5666888888877655555433321 22355666666666554 334444 322 333343
Q ss_pred HHHHHHHHHH----HHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchh
Q 002430 797 VIAQLVATFI----AVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAW 855 (923)
Q Consensus 797 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~ 855 (923)
++++.+..+. --|....| -.+|.+++.+.++.++..+|..+.|.++|++.|++.-
T Consensus 989 ~lsL~~Yivsl~~l~~yfd~~f----~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYa 1047 (1051)
T KOG0210|consen 989 LLSLALYIVSLAFLHEYFDRYF----ILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYA 1047 (1051)
T ss_pred HHHHHHHHHHHHHHHhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchh
Confidence 3333221111 11111111 2356666666777888888999999999999888743
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-79 Score=716.46 Aligned_cols=475 Identities=36% Similarity=0.538 Sum_probs=417.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEE
Q 002430 105 IVLLVINSTISFIEENNAGNAAAALMA--NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKID 182 (923)
Q Consensus 105 ~~~~~~~~~~~~~~e~~~~~~~~~l~~--~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vd 182 (923)
+++++++..++.+++++++++.+.|++ ..+++++|+||| +++|++++|+|||+|.+++||.|||||+|++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 356678889999999999999999998 788899999999 99999999999999999999999999999999 79999
Q ss_pred eccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHH-HHHHHHHHHHH
Q 002430 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIG-NFCICSIAVGI 260 (923)
Q Consensus 183 es~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~-~~~~~~i~~~~ 260 (923)
||+|||||.|+.|.+|+.+++||.+.+|+..+.|+.+|.+|..+++..++.... .++++++..+++. .+++..++++.
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998775 4788899999998 55444433323
Q ss_pred HHHHHHHHhcccc--chHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCc
Q 002430 261 VAEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 338 (923)
Q Consensus 261 ~~~~~~~~~~~~~--~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGT 338 (923)
++.++.++..... +|..++..++++++++|||+||+++++++..+..+|+++|+++|+++++|+||+++++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 3222222222112 37788999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEEEEEe
Q 002430 339 LTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYID 418 (923)
Q Consensus 339 LT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~ 418 (923)
||+|+|+|.++... . + ....+||++.|+++++.. +.++..||++.+++|++++..
T Consensus 241 LT~~~~~v~~~~~~--~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSVL--G-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEec--C-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 99999999987642 1 0 123459999999987642 123567999999999998875
Q ss_pred cCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccH
Q 002430 419 SDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDS 498 (923)
Q Consensus 419 ~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~ 498 (923)
.++ .++||+++.+.+.|.. +.+.+++++.+|+|++++|++. +++|++.++|++|+|+
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4789999999998752 3344556888999999999876 7999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHH
Q 002430 499 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIV 578 (923)
Q Consensus 499 ~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV 578 (923)
+++|+.|+++|++++|+|||+..+|..+|+++|| +||++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 6889999999999
Q ss_pred HHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 002430 579 KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 658 (923)
Q Consensus 579 ~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n 658 (923)
+.+|+.|+.|+|+|||+||+|||++|||||||+ |+++||++|+++++..++.++.+||++++++++++.|++++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 002430 659 IRIVLGFML 667 (923)
Q Consensus 659 i~~~~~~~~ 667 (923)
+..++..++
T Consensus 475 ~~~~~~a~~ 483 (499)
T TIGR01494 475 LILIPLAAL 483 (499)
T ss_pred HHHHHHHHH
Confidence 875554443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-76 Score=702.70 Aligned_cols=517 Identities=26% Similarity=0.371 Sum_probs=436.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCC-eEEEEeCCCCCC
Q 002430 77 VMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG-RWSEQDASILVP 155 (923)
Q Consensus 77 ~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg-~~~~i~~~~Lv~ 155 (923)
++.++++++++++ .|.++.+|+++++++..+++++++|+++.+++|.+..+++++|+||| ++++|++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 4456667777776 89999999999999999999999999999999999999999999996 999999999999
Q ss_pred CcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc
Q 002430 156 GDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (923)
Q Consensus 156 GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~ 235 (923)
||+|.+++||.|||||+|++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|.+|++.++++.+
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 999999999999999999999 5799999999999999999999999999999999999999999999999999999776
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCc
Q 002430 236 -NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (923)
Q Consensus 236 -~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (923)
.+++++++.+++++.+++..++++.++.+++++. .... .++..++++++++|||+||++++++++.+..+++++|+
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~-~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gi 232 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA-LGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGI 232 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCc
Confidence 5789999999999988766555544443333332 2222 78889999999999999999999999999999999999
Q ss_pred eeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCC--hHHHHHHHHHHccccCcchHHHHHHHhcCChhh
Q 002430 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE--KEHVILLAARASRTENQDAIDAAIVGMLADPKE 392 (923)
Q Consensus 315 lvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~ 392 (923)
++|+++++|+||++|++|||||||||+|+|+|.++... .+.+ +++++.+++..+.. ..||++.|++.++.....
T Consensus 233 lvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---~~~~~~~~~~l~~a~~~e~~-~~hp~~~Ai~~~~~~~~~ 308 (556)
T TIGR01525 233 LIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPL---DDASISEEELLALAAALEQS-SSHPLARAIVRYAKKRGL 308 (556)
T ss_pred eecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEec---CCCCccHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999987631 2233 66777776655544 459999999988743210
Q ss_pred hhcCce-eEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecC
Q 002430 393 ARAGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIP 471 (923)
Q Consensus 393 ~~~~~~-~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~ 471 (923)
.... + ..+++| .+..... .+|. ..+..|+++.+ + .. ..+ ....++.+++++++|+|+++++.+.
T Consensus 309 ~~~~-~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~~-~-~~-~~~-~~~~~~~~~~~~~~g~~~~~v~~~~-- 373 (556)
T TIGR01525 309 ELPK-QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRLL-E-LA-AEP-ISASPDLLNEGESQGKTVVFVAVDG-- 373 (556)
T ss_pred Cccc-ccCeeEec----CCeEEEE---ECCe-eEEEEecHHHH-h-hc-CCC-chhhHHHHHHHhhCCcEEEEEEECC--
Confidence 0000 1 111111 1122221 2342 34567888876 2 11 111 1223455677889999999999754
Q ss_pred CCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCC-CEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccc
Q 002430 472 EKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDAS 550 (923)
Q Consensus 472 ~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aG-I~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~ 550 (923)
+++|.+.++|++|||++++|++|+++| ++++|+|||+..++..+++++|+..
T Consensus 374 -----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------- 426 (556)
T TIGR01525 374 -----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------- 426 (556)
T ss_pred -----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe----------------
Confidence 899999999999999999999999999 9999999999999999999999832
Q ss_pred cCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCc
Q 002430 551 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL 630 (923)
Q Consensus 551 ~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~ 630 (923)
+|+++.|++|.++++.+|+.++.|+|+|||.||+||+++|||||++|++++.++++||+++.++++
T Consensus 427 --------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~ 492 (556)
T TIGR01525 427 --------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDL 492 (556)
T ss_pred --------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 631 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 664 (923)
Q Consensus 631 ~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 664 (923)
+.++.++++||++++||++++.|++.+|+..+..
T Consensus 493 ~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~ 526 (556)
T TIGR01525 493 SSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPL 526 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999865543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-76 Score=699.59 Aligned_cols=499 Identities=30% Similarity=0.414 Sum_probs=428.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCC
Q 002430 76 WVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVP 155 (923)
Q Consensus 76 ~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~ 155 (923)
.++.++++++++++ +|.++.+|+++++++..+++++++|+++.+++|++..+++++|+|||+++++++++|+|
T Consensus 3 ~l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 3 LLMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCC
Confidence 34566778888876 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc
Q 002430 156 GDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (923)
Q Consensus 156 GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~ 235 (923)
||+|.+++||+|||||++++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|.+||+.++++..
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~ 154 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEA 154 (536)
T ss_pred CCEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHH
Confidence 999999999999999999999 5799999999999999999999999999999999999999999999999999999876
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCc
Q 002430 236 -NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (923)
Q Consensus 236 -~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (923)
.+++++|+.+++++++++..++++.++.+++++... .+..++..++++++++|||+||+++++++..+..+++++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gi 232 (536)
T TIGR01512 155 QSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGI 232 (536)
T ss_pred hhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCe
Confidence 478899999999998877666554444444333222 23337888999999999999999999999999999999999
Q ss_pred eeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhh
Q 002430 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEAR 394 (923)
Q Consensus 315 lvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~ 394 (923)
++|+++++|++|+++++|||||||||+|+|++.++.. .+++.+++..+. ...||++.|+++++.+..
T Consensus 233 lik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~--- 299 (536)
T TIGR01512 233 LIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQ-ASSHPLARAIVDYARKRE--- 299 (536)
T ss_pred EEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhc-cCCCcHHHHHHHHHHhcC---
Confidence 9999999999999999999999999999999987642 256777665443 445999999998764321
Q ss_pred cCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCC
Q 002430 395 AGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT 474 (923)
Q Consensus 395 ~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~ 474 (923)
.....+.+|. +.... ..+|+. +..|+++.+.+.. .+.+..+|.+++.++.+.
T Consensus 300 -~~~~~~~~~g----~gi~~---~~~g~~--~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~----- 351 (536)
T TIGR01512 300 -NVESVEEVPG----EGVRA---VVDGGE--VRIGNPRSLEAAV-------------GARPESAGKTIVHVARDG----- 351 (536)
T ss_pred -CCcceEEecC----CeEEE---EECCeE--EEEcCHHHHhhcC-------------CcchhhCCCeEEEEEECC-----
Confidence 1222222221 11111 124543 4468887653311 014566788888877543
Q ss_pred CCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC-EEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCc
Q 002430 475 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAA 553 (923)
Q Consensus 475 ~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI-~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~ 553 (923)
+++|.+.++|++|||++++|++|+++|+ +++|+|||+..+|..+++++|+..
T Consensus 352 --------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~------------------- 404 (536)
T TIGR01512 352 --------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE------------------- 404 (536)
T ss_pred --------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-------------------
Confidence 8999999999999999999999999999 999999999999999999999842
Q ss_pred chHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-cchHHHhhccCEEecCCCchh
Q 002430 554 LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSV 632 (923)
Q Consensus 554 ~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~gtd~A~~aADivl~~~~~~~ 632 (923)
+|+++.|++|.++++.++++++.|+|+|||.||+||+++||+||++| +|++.++++||+++.+++++.
T Consensus 405 -----------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~ 473 (536)
T TIGR01512 405 -----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSR 473 (536)
T ss_pred -----------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHH
Confidence 48889999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 633 IISAVLTSRAIFQRMKNYTIYAVSITIRIVL 663 (923)
Q Consensus 633 i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~ 663 (923)
+.+++.+||++++|+++++.|++.+|+..+.
T Consensus 474 l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~ 504 (536)
T TIGR01512 474 LPQAIRLARRTRRIVKQNVVIALGIILLLIL 504 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999975444
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-76 Score=695.32 Aligned_cols=506 Identities=26% Similarity=0.386 Sum_probs=424.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC-CeEEEEeCCCCCCCcEEEEeCCCeeccceEEEe
Q 002430 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (923)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rd-g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~ 175 (923)
+|....+++++++++..++.+.++|+++++++|++..|.+++++|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4455666677778888889889999999999999999999999985 677999999999999999999999999999999
Q ss_pred cCCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHH
Q 002430 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCIC 254 (923)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~ 254 (923)
| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|+++|.+|.+||+.++++++ .+++++|+..++++++++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 5799999999999999999999999999999999999999999999999999999877 4789999999999988766
Q ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEec
Q 002430 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (923)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~D 334 (923)
.+++..++.+ +.| ..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 212 ~v~~~a~~~~-~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALITF-VIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHH-HHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 5554333322 222 24788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEE
Q 002430 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (923)
Q Consensus 335 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv 414 (923)
||||||+|+|++.++.. . .+.++++++.+++..+...+ ||++.|++.++.............+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~~--~-~~~~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV--F-GDRDRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec--C-CCCCHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 99999999999998753 2 24566788888776665544 9999999987642211001111222222 122222
Q ss_pred EEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCC
Q 002430 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (923)
Q Consensus 415 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~l 494 (923)
. .+| ..+..|+++.+.+... . +.++.++|.+++.++... +++|.+.++|++
T Consensus 356 ~---~~g--~~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEG--TKIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECC--EEEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 2 245 3467799998643211 1 112456899999888754 899999999999
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhH
Q 002430 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (923)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K 574 (923)
|||++++|++|++.|++++|+|||+..++..+++++|+. +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999982 4788899999
Q ss_pred HHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHH
Q 002430 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (923)
Q Consensus 575 ~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 654 (923)
.++++.+|++++.|+|+|||.||+||+++|||||+||.|++.++++||+++.++++..++.+++.||+++++|++++.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcHH
Q 002430 655 VSITIRIVLGFMLIALIWKFDFSPF 679 (923)
Q Consensus 655 ~~~ni~~~~~~~~~~~~~~~~~~~~ 679 (923)
+.+|+..+...+...+.+++.++|+
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999876655444444444445553
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-75 Score=717.90 Aligned_cols=520 Identities=24% Similarity=0.311 Sum_probs=436.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCC
Q 002430 99 QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP 178 (923)
Q Consensus 99 ~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~ 178 (923)
..+.++++++.+...++.+.+.|+.+++++|+++.|++++++|||++++|+.++|+|||+|.|++||+|||||+|++| .
T Consensus 287 ~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g-~ 365 (834)
T PRK10671 287 EASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG-E 365 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc-e
Confidence 446778888899999999999999999999999999999999999999999999999999999999999999999999 6
Q ss_pred eEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHHHHH
Q 002430 179 LKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIA 257 (923)
Q Consensus 179 ~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~ 257 (923)
+.||||+|||||.|+.|++||.+|+||.+.+|.+.++|+++|.+|.+||+.++++++ .+++++|+..++++.+++.+++
T Consensus 366 ~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~ 445 (834)
T PRK10671 366 AWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVV 445 (834)
T ss_pred EEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999877 4788999999999988766555
Q ss_pred HHHHHHHHHHHhccc-cchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCC
Q 002430 258 VGIVAEIIIMYPVQH-RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 336 (923)
Q Consensus 258 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKT 336 (923)
++.++.+++++.... ..+..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+++++|++|||||
T Consensus 446 ~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKT 525 (834)
T PRK10671 446 VIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKT 525 (834)
T ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCC
Confidence 434333333332211 1255678889999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEEEE
Q 002430 337 GTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTY 416 (923)
Q Consensus 337 GTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv~~ 416 (923)
||||+|+|+|.+... ..+.++++++.+++..+... .||++.|+++++.+.. .... .+|.....+ .+..
T Consensus 526 GTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s-~hp~a~Ai~~~~~~~~--~~~~-----~~~~~~~g~-Gv~~ 593 (834)
T PRK10671 526 GTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGS-SHPLARAILDKAGDMT--LPQV-----NGFRTLRGL-GVSG 593 (834)
T ss_pred CccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHhhCC--CCCc-----ccceEecce-EEEE
Confidence 999999999987652 22456777787777666544 4999999988764210 0111 122222211 1111
Q ss_pred EecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCc
Q 002430 417 IDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRH 496 (923)
Q Consensus 417 ~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~ 496 (923)
..+|+ .+.+|+++.+.+... ..+.+.+.++++.++|.+++.++++. +++|++.+.|++||
T Consensus 594 -~~~g~--~~~~G~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~r~ 653 (834)
T PRK10671 594 -EAEGH--ALLLGNQALLNEQQV----DTKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPLRS 653 (834)
T ss_pred -EECCE--EEEEeCHHHHHHcCC----ChHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcchh
Confidence 12554 456799998754221 12345666778889999999999865 79999999999999
Q ss_pred cHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHH
Q 002430 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYE 576 (923)
Q Consensus 497 ~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~ 576 (923)
|++++|++|++.|+++.|+|||+..+|..+++++||.. +|+++.|++|.+
T Consensus 654 ~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------------------~~~~~~p~~K~~ 703 (834)
T PRK10671 654 DSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------------------VIAGVLPDGKAE 703 (834)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------------------EEeCCCHHHHHH
Confidence 99999999999999999999999999999999999842 589999999999
Q ss_pred HHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHH
Q 002430 577 IVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 656 (923)
Q Consensus 577 iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~ 656 (923)
+++.+|++++.|+|+|||.||+|||++||+||+||+|++.++++||++++++++..|+.++++||+++++|++|+.|++.
T Consensus 704 ~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~ 783 (834)
T PRK10671 704 AIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFI 783 (834)
T ss_pred HHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-hcCCCcHHHH
Q 002430 657 ITIRIVLGFMLIALI-WKFDFSPFMV 681 (923)
Q Consensus 657 ~ni~~~~~~~~~~~~-~~~~~~~~~i 681 (923)
+|+..+...++.+.. +++.++|+.-
T Consensus 784 yn~~~i~~a~g~~~p~~g~~l~p~~a 809 (834)
T PRK10671 784 YNSLGIPIAAGILWPFTGTLLNPVVA 809 (834)
T ss_pred HHHHHHHHHHhchhhhhhcccCHHHH
Confidence 998665544322211 2334666543
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-74 Score=642.05 Aligned_cols=571 Identities=25% Similarity=0.300 Sum_probs=428.9
Q ss_pred CCHHHHHHHcCCCCCCCCH-HHHHHHHhhcCCCccCcccccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhh
Q 002430 22 IPIEEVFEQLKCSREGLTS-DEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQD 100 (923)
Q Consensus 22 ~~~~~~~~~l~~~~~GLs~-~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~ 100 (923)
.+.++.+..++. .+|++. +|++.-.++||.|+.....+++-..|.+.-..|+ ++|.+..+..|.+. .+|+.
T Consensus 148 fp~~~~~g~~~k-~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCLD------eyWYy 219 (1160)
T KOG0209|consen 148 FPTDEPFGYFQK-STGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCLD------EYWYY 219 (1160)
T ss_pred cCcCCcchhhhh-ccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHhH------HHHHH
Confidence 344443333332 256663 4444555569999999999999889999999999 66666666667764 47887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeC---CCeeccceEEEecC
Q 002430 101 FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL---GDIVPADARLLEGD 177 (923)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~---Gd~IPaD~~ll~g~ 177 (923)
.+.-+++++..-.--..|+.+.-+.... +...+..+.|+|+++|+.+..+||.|||+|.+.. ...||||.+|+.|
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G- 297 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG- 297 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-
Confidence 7776666555444344455544433332 2334567899999999999999999999999987 6789999999999
Q ss_pred CeEEEeccccCCCcceecCCC-----------------Ccccccceeec-------------CeEEEEEEEecchhhHHh
Q 002430 178 PLKIDQSALTGESLPVTKNPY-----------------DEVFSGSTCKQ-------------GEIEAVVIATGVHTFFGK 227 (923)
Q Consensus 178 ~~~Vdes~LTGEs~pv~K~~~-----------------~~v~~Gt~v~~-------------G~~~~~V~~tG~~T~~g~ 227 (923)
+|.|||++|||||.|..|.+- ..+|.||.+++ |-+.+.|++||.+|..|+
T Consensus 298 sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 298 SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCc
Confidence 689999999999999999762 36899999876 569999999999999998
Q ss_pred HHhhhhc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------cchHHHHHHHHHHHHhhccCchhHHHHH
Q 002430 228 AAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH------RKYRDGIDNLLVLLIGGIPIAMPTVLSV 300 (923)
Q Consensus 228 i~~l~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~lli~~iP~~L~~~~~~ 300 (923)
+.+.+-- +++.+.-.+ +.+ .++..+++ ++....+|.+.. ++-...+.-+..++...+|..||+-+++
T Consensus 378 LvRtilf~aervTaNn~--Etf--~FILFLlV--FAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSm 451 (1160)
T KOG0209|consen 378 LVRTILFSAERVTANNR--ETF--IFILFLLV--FAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSM 451 (1160)
T ss_pred eeeeEEecceeeeeccH--HHH--HHHHHHHH--HHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhH
Confidence 8775543 233221111 111 11111111 111122332221 1222345566777888999999999999
Q ss_pred HHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecc-------cCCChHHHHHHHHHHccc
Q 002430 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA-------KGVEKEHVILLAARASRT 373 (923)
Q Consensus 301 ~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-------~~~~~~~~l~~a~~~~~~ 373 (923)
+.-.+...|+|.+++|..+-.+.-.|+||+.|||||||||+..|.|..+.-.... ...+.+.+..+|++++..
T Consensus 452 AVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv 531 (1160)
T KOG0209|consen 452 AVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLV 531 (1160)
T ss_pred HHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999875421001 011234555666665432
Q ss_pred -----cCcchHHHHHHHhcCChhh----------hhcCceeEEeecCCCCCcceEEEEEecC----CcEEEEEcCcHHHH
Q 002430 374 -----ENQDAIDAAIVGMLADPKE----------ARAGVREVHFLPFNPVDKRTALTYIDSD----GNWHRASKGAPEQI 434 (923)
Q Consensus 374 -----~~~~~~~~ai~~~~~~~~~----------~~~~~~~l~~~~F~s~~k~~sv~~~~~~----g~~~~~~KGa~e~i 434 (923)
-.+||++.|.+..++..-+ ...+.++.+.+.|.|.-|||+++..... -+++..+|||||+|
T Consensus 532 ~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi 611 (1160)
T KOG0209|consen 532 LLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVI 611 (1160)
T ss_pred HhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHH
Confidence 2469999999988743211 1124677888999999999999876321 36889999999999
Q ss_pred HHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCC--------CCCCCCCCCceEEEEeccCCCCCccHHHHHHHHH
Q 002430 435 LALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPE--------KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRAL 506 (923)
Q Consensus 435 l~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~--------~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~ 506 (923)
.++.. ++++.+++...+++++|.||||++||+++. -.+++.|++|+|.|++.|.-|+|+|++++|+.|+
T Consensus 612 ~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~ 688 (1160)
T KOG0209|consen 612 QEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELN 688 (1160)
T ss_pred HHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHh
Confidence 99876 567788888999999999999999999873 2367899999999999999999999999999999
Q ss_pred hCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCc---------------------------------------ccCccc
Q 002430 507 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSS---------------------------------------LLGQDK 547 (923)
Q Consensus 507 ~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~---------------------------------------l~~~~~ 547 (923)
+.+.+|+||||||+.||.++|+++||..+..+.-. ++|...
T Consensus 689 ~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l 768 (1160)
T KOG0209|consen 689 NSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSAL 768 (1160)
T ss_pred ccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHH
Confidence 99999999999999999999999999654110000 011111
Q ss_pred ccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec
Q 002430 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611 (923)
Q Consensus 548 ~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg 611 (923)
+.-...+.+.+++.++.||||+.|.||..++..|++.|+.++|||||.||+.|||+||||||+-
T Consensus 769 ~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL 832 (1160)
T KOG0209|consen 769 DHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL 832 (1160)
T ss_pred HHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh
Confidence 1111122455667788899999999999999999999999999999999999999999999984
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-63 Score=538.03 Aligned_cols=520 Identities=25% Similarity=0.371 Sum_probs=404.7
Q ss_pred HhhchHHHHHHHHHHHHHHHh----cCCCCCCchhhHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhcC-CCcEEE
Q 002430 69 FMWNPLSWVMEAAAIMAIALA----NGGGRDPDWQDFVGIIVLLVINSTI----SFIEENNAGNAAAALMANL-APKTKV 139 (923)
Q Consensus 69 ~~~~~~~~~l~~~ail~~~l~----~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~e~~~~~~~~~l~~~~-~~~~~V 139 (923)
+.+||..++-++.++++.++. .-++...++.....|.+++.+..++ +.+.|-|.+...++|++.. ...+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 467888888777777776322 1111112333333344444444443 4445555555556666533 335677
Q ss_pred EeC-CeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC---CcccccceeecCeEEEE
Q 002430 140 LRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEAV 215 (923)
Q Consensus 140 ~Rd-g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~---~~v~~Gt~v~~G~~~~~ 215 (923)
+++ |.++.+++.+|+.||+|.++.||.||+||.++|| ..+||||++||||-||.|.+| +.+-.||.+.+..++..
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 776 8999999999999999999999999999999999 579999999999999999998 67999999999999999
Q ss_pred EEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccchHHHHHHHHHHHHhhccC
Q 002430 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQ--HRKYRDGIDNLLVLLIGGIPI 292 (923)
Q Consensus 216 V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~lli~~iP~ 292 (923)
+++.-.+|++.|+..+++.++ +++|-+-.++-+..-+ .+++++ .....|.+. ...-...+...++++++.||-
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~L---TliFL~-~~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPT 263 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGL---TLIFLL-AVATLYPFAIYSGGGAASVTVLVALLVCLIPT 263 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHH---HHHHHH-HHHhhhhHHHHcCCCCcCHHHHHHHHHHHhcc
Confidence 999999999999999998874 6666444333321111 111111 111122111 101113456778899999999
Q ss_pred chhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHcc
Q 002430 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (923)
Q Consensus 293 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~ 372 (923)
...--++-.-..|+.|+.+.|++.++..++|..|.+|++..|||||+|-|.=.-.++.. ..+.+.+++...+..++.
T Consensus 264 TIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p---~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 264 TIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIP---VPGVSEEELADAAQLASL 340 (681)
T ss_pred cHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheec---CCCCCHHHHHHHHHHhhh
Confidence 88887877777899999999999999999999999999999999999998766555542 457888888887777665
Q ss_pred ccCcchHHHHHHHhcCChh-hhh-cCce-eEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCCh-hHHHHH
Q 002430 373 TENQDAIDAAIVGMLADPK-EAR-AGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKV 448 (923)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~-~~~-~~~~-~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~ 448 (923)
..+ .|...+++..+.... +.+ +... ..+++||+.+.+++.+-. +++ ..+.|||.+.+.+..+... ..++.+
T Consensus 341 ~De-TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 ADE-TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred ccC-CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 433 555566665543211 111 1111 357899998876655432 233 5788999999999876433 367888
Q ss_pred HHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHH
Q 002430 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR 528 (923)
Q Consensus 449 ~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~ 528 (923)
++..++-++.|-..|+++... +++|++.++|-++||.+|-+.+||+.|||.+|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 999999999999999999866 8999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeee
Q 002430 529 RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (923)
Q Consensus 529 ~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGI 608 (923)
+.|.++ ..|+++||+|.++|+.-|.+|+.|+|||||.||+|||.+||||+
T Consensus 483 EAGVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~ 532 (681)
T COG2216 483 EAGVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532 (681)
T ss_pred HhCchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhh
Confidence 999853 37899999999999999999999999999999999999999999
Q ss_pred EeccchHHHhhccCEEecCCCchhHHHHHHHhHHHH
Q 002430 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 644 (923)
Q Consensus 609 amg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~ 644 (923)
||.+||++||||+.+|=+|.|-..+++.++.|++..
T Consensus 533 AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 533 AMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hhccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999999999999999999999864
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=315.13 Aligned_cols=222 Identities=36% Similarity=0.508 Sum_probs=194.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-EEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEE
Q 002430 103 GIIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKI 181 (923)
Q Consensus 103 ~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~-~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~V 181 (923)
+|+++++++..+++++++|+++.++++++..+++ ++|+|||++++++++||+|||+|.|++||.+||||++++.+.+.|
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~v 80 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccccc
Confidence 3677888899999999999999999999988887 999999999999999999999999999999999999999337999
Q ss_pred EeccccCCCcceecC-----CCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHHHHHHHH
Q 002430 182 DQSALTGESLPVTKN-----PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (923)
Q Consensus 182 des~LTGEs~pv~K~-----~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~ 255 (923)
|||.||||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|..|++.+...... +++++++.++++..+++.+
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999999999999999999999999999987765 5689999999999887655
Q ss_pred HHHHHHHHHHHHHh-ccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhh
Q 002430 256 IAVGIVAEIIIMYP-VQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 324 (923)
Q Consensus 256 i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~ 324 (923)
++++.++.+++.+. ....++...+..++++++.+||++||+++++++..++++|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 55444433332222 2456778889999999999999999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-26 Score=241.61 Aligned_cols=211 Identities=32% Similarity=0.414 Sum_probs=151.4
Q ss_pred ceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCC
Q 002430 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (923)
Q Consensus 328 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s 407 (923)
|++||||||||||+|+|.+ . . .+...++..+....... .||+..++..+....... .. ..+|..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~---~~~~~~~~~~~~~~~~s-~~p~~~~~~~~~~~~~~~-~~-----~~~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P---PSNEAALAIAAALEQGS-EHPIGKAIVEFAKNHQWS-KS-----LESFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S---CSHHHHHHHHHHHHCTS-TSHHHHHHHHHHHHHHHH-SC-----CEEEEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e---ccHHHHHHHHHHhhhcC-CCcchhhhhhhhhhccch-hh-----hhhhee
Confidence 6899999999999999999 1 1 34455565555444433 499999988876543221 11 112222
Q ss_pred CCcceEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEE
Q 002430 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (923)
Q Consensus 408 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~ 487 (923)
...++..... ++. +. |+++.+.+..... . ...........+|...+.++. +++++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV--I--SPDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--H--HHHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc--c--ccchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 2222221111 222 22 8888877654321 1 111122223445555665554 3489999
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002430 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
+.+.|++|||++++|+.|+++|++++|+|||+..+|.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999832 23799
Q ss_pred ec--ChhhH--HHHHHHHhhCCCEEEEEcCCccChHhhhcCC
Q 002430 568 GV--FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (923)
Q Consensus 568 r~--sP~~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~Ad 605 (923)
++ +|++| .++++.||.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.4e-15 Score=135.24 Aligned_cols=123 Identities=26% Similarity=0.394 Sum_probs=106.9
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhh
Q 002430 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (923)
Q Consensus 483 ~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 562 (923)
...+.++---++=++++++|++|++. ++|.+.|||...+-...|.-.||+.+
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 45677777778889999999999999 99999999999999999999998642
Q ss_pred cCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe-c--cchHHHhhccCEEecCCCchhHHHH
Q 002430 563 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISA 636 (923)
Q Consensus 563 ~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam-g--~gtd~A~~aADivl~~~~~~~i~~~ 636 (923)
++||..-|+.|.++++.|++++++|.|+|||+||.+||++||+||.. + +..+-+.++||+++-+ ...+++.
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 47999999999999999999999999999999999999999999987 4 4566678999999853 4444443
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.9e-13 Score=113.15 Aligned_cols=67 Identities=37% Similarity=0.553 Sum_probs=61.4
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCc-ccccHHHHHHHHhhchHHHHHHHHHHHH
Q 002430 19 LERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEE-KKESKVLKFLGFMWNPLSWVMEAAAIMA 85 (923)
Q Consensus 19 ~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~-~~~~~~~~~l~~~~~~~~~~l~~~ail~ 85 (923)
||.++.+++++.|+++ .+|||++||++|+++||+|++++ ++.++|..|+++|++|+.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7999999999999965 88999999999999999999965 4578899999999999999999999986
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.8e-09 Score=118.00 Aligned_cols=209 Identities=18% Similarity=0.210 Sum_probs=143.0
Q ss_pred CceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC-----------CCCcc-------
Q 002430 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----------PSSSL------- 542 (923)
Q Consensus 481 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~-----------~~~~l------- 542 (923)
+-.|.|++...-++|++....|+.|-++-|+.+-.+-.+....+-.|.++||..... |....
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 347899999999999999999999999999999999999999999999999954211 11000
Q ss_pred cCc---------------cccc---------------ccC--------cchHHHH-----------------hhhcCeEE
Q 002430 543 LGQ---------------DKDA---------------SIA--------ALPVDEL-----------------IEKADGFA 567 (923)
Q Consensus 543 ~~~---------------~~~~---------------~~~--------~~~~~~~-----------------~~~~~vfa 567 (923)
.++ .+.. .++ +.+..++ -.-+..|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 000 0000 000 0001110 00122588
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCh--HhhhcCCeeeEecc-------------chHH-HhhccC---------
Q 002430 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDA--PALKKADIGIAVAD-------------ATDA-ARSASD--------- 622 (923)
Q Consensus 568 r~sP~~K~~iV~~lq~~g~~V~m~GDG~NDa--paLk~AdVGIamg~-------------gtd~-A~~aAD--------- 622 (923)
.++|+.--++++.+|++|++|+.+|.-.|-. --.-+|||+|++.. ++.. -.+|+|
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 9999999999999999999999999999844 34468999999842 1111 011233
Q ss_pred --------EEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCcHHHHHHHHHHhc
Q 002430 623 --------IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-IALIWKFDFSPFMVLIIAILND 689 (923)
Q Consensus 623 --------ivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~-~~~~~~~~~~~~~il~i~l~~d 689 (923)
+-+-...+-+|..+|+..|....-+|+.++|.+.......+..+. .+++.+..|+--+++|...|--
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~ 1129 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCI 1129 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHH
Confidence 223233345678888899999999999999998887755554444 4445566677777777776653
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.22 E-value=2e-10 Score=117.20 Aligned_cols=166 Identities=16% Similarity=0.178 Sum_probs=112.2
Q ss_pred cCCCcHHHHHHHHHHhccc-ccccccCCCCCC-----CCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 002430 673 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----PQP--DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD 744 (923)
Q Consensus 673 ~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~~-----~~p--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 744 (923)
|.|++|+|+||+|+++|.+ ++++++|+++++ |++ ++.-.++.+...+..|+++++++++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 4689999999999999987 799999998764 221 122235567777888999999999888776541
Q ss_pred ccCccc--cCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCccc----chhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 002430 745 AFGVRS--LRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE----RPGLLLATAFVIAQLVATFIAVYAN--WSFAR 816 (923)
Q Consensus 745 ~~g~~~--~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 816 (923)
+|.+. ...+..+.+|+.|+.+++++.++.+++|+.+...+. +.+++++.+++++.++..++ +|.+ -..++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i-~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILI-VYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHH-HHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHH-hcchhhHhhhc
Confidence 22211 111345689999999999999999999996532211 23456777777666554433 4543 22345
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002430 817 IEGCGWGWAGVIWLYSLVTYFPLDILKFG 845 (923)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 845 (923)
+.+.++..|+.+++++++.++..|++|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 66778877888899999999999999974
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.6e-10 Score=96.26 Aligned_cols=60 Identities=42% Similarity=0.689 Sum_probs=53.9
Q ss_pred HcCCCC-CCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHh
Q 002430 30 QLKCSR-EGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALA 89 (923)
Q Consensus 30 ~l~~~~-~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~ 89 (923)
.|+++. +|||++|+++|+++||+|+++.++ .++|+.|+++|++|+.++|+++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 366774 499999999999999999998876 788999999999999999999999999864
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.3e-09 Score=107.67 Aligned_cols=131 Identities=15% Similarity=0.110 Sum_probs=97.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..- +........ ....++. --..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~-~an~l~~~~--~g~~tG~------------~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDD--SDRVVGY------------QLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchh-hceeeEEec--CCeeECe------------eecCcc
Confidence 57999999999999975 9999999999999999999998632 111111000 0000110 114588
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHh
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~g 640 (923)
+|..+++.+++.|..+.|+|||.||.||++.|++||++.....+.+.+-|+-.. .+++.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 999999999988888999999999999999999999998666666655555444 4577777777654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1e-08 Score=113.26 Aligned_cols=131 Identities=21% Similarity=0.274 Sum_probs=97.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+..... ..+.- .+..+.+.... + -+..+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~a--n~lei--~dg~ltg~v~g------~---iv~~k 247 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVA--NELEI--MDGKLTGNVLG------D---IVDAQ 247 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEE--eEEEE--ECCEEEeEecC------c---cCCcc
Confidence 478999999999999999999999999888889999999853110 00000 00000000000 0 02346
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
.|.+.++.+.++ | +.|.++|||.||.+|++.|++|||+ ++.+..++.||.++...++..++..+
T Consensus 248 ~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 248 YKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred cHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 899988888654 3 5699999999999999999999999 78888999999999988988887665
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.1e-08 Score=107.66 Aligned_cols=129 Identities=21% Similarity=0.284 Sum_probs=93.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe-cCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar-~sP 571 (923)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..- +....... +....+ .+.+. ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE---CCEEEE----------EecCcccCC
Confidence 5899999999999999999999999999999999999998531 11100000 000000 00111 123
Q ss_pred hhHHHHHHHHhhCC----CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHH
Q 002430 572 EHKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (923)
Q Consensus 572 ~~K~~iV~~lq~~g----~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~ 636 (923)
..|..+++.+.++. ..+.|+||+.||.+|+++|+++++++ +.+..+++||++|.+++|..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 44777777665542 35889999999999999999999985 467788899999999999887653
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.81 E-value=8.9e-09 Score=92.02 Aligned_cols=65 Identities=32% Similarity=0.470 Sum_probs=54.2
Q ss_pred CcchHHHHHHHhcC------ChhhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC
Q 002430 375 NQDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC 440 (923)
Q Consensus 375 ~~~~~~~ai~~~~~------~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~ 440 (923)
.++|.|.|++.++. +....+..+++++.+||+|++|||+++++ .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 45899999988763 24567788999999999999999999998 3345777999999999999973
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.9e-07 Score=98.91 Aligned_cols=153 Identities=24% Similarity=0.295 Sum_probs=103.6
Q ss_pred EEeccCCC-CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC-CC-Ccc-c---Ccc------------
Q 002430 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PS-SSL-L---GQD------------ 546 (923)
Q Consensus 486 G~i~i~D~-lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~-~~-~~l-~---~~~------------ 546 (923)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.....+..+.+++|+..... .. ..+ . +..
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33443444 67899999999999999999999999999999999999853110 00 000 0 000
Q ss_pred -----------------cccc--------cCc---chHHHHhhhcC--e-------EEecChhh--HHHHHHHHhhC-C-
Q 002430 547 -----------------KDAS--------IAA---LPVDELIEKAD--G-------FAGVFPEH--KYEIVKRLQER-K- 585 (923)
Q Consensus 547 -----------------~~~~--------~~~---~~~~~~~~~~~--v-------far~sP~~--K~~iV~~lq~~-g- 585 (923)
.+.. ... +++.+.+++.. + +..+.|.. |..-++.+.+. |
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 0000 000 11222222211 1 22344443 77777777653 2
Q ss_pred --CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 586 --HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 586 --~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.-+.++||+.||.+|++.|++|+||+++.+..|++||+|..+++=..+..+++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 45899999999999999999999999999999999999998777777777764
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.66 E-value=9.9e-08 Score=95.40 Aligned_cols=100 Identities=19% Similarity=0.268 Sum_probs=79.9
Q ss_pred HHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEec--ChhhHHHH
Q 002430 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV--FPEHKYEI 577 (923)
Q Consensus 500 ~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~--sP~~K~~i 577 (923)
.+|+.|++.|+++.++|+.+...+..+.+.+|+..- |... .|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 689999999999999999999999999999998521 1111 23333444
Q ss_pred HHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCC
Q 002430 578 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (923)
Q Consensus 578 V~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~ 629 (923)
++.++-...-|+|+||+.||.+|++.|++++||+++.+..+.+||+|...++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 4444333456999999999999999999999999999999999999986544
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.1e-07 Score=99.82 Aligned_cols=143 Identities=20% Similarity=0.261 Sum_probs=97.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC-C-CCcccCc-c-------ccc-------------
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-P-SSSLLGQ-D-------KDA------------- 549 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~-~-~~~l~~~-~-------~~~------------- 549 (923)
++.+++.++|++|++.|+++.+.||.....+..+++++++..... . ...+... . ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 378899999999999999999999999999999999999853211 0 0000000 0 000
Q ss_pred --------------ccCc---chHHHHhhhcC--e-----EEecCh--hhHHHHHHHHhhC-C---CEEEEEcCCccChH
Q 002430 550 --------------SIAA---LPVDELIEKAD--G-----FAGVFP--EHKYEIVKRLQER-K---HICGMTGDGVNDAP 599 (923)
Q Consensus 550 --------------~~~~---~~~~~~~~~~~--v-----far~sP--~~K~~iV~~lq~~-g---~~V~m~GDG~NDap 599 (923)
..+. +.+.+.+.+.. + +..++| ..|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000 11122222211 1 122333 4788888887653 3 34899999999999
Q ss_pred hhhcCCeeeEeccchHHHhhccCEEecCCCchhHHH
Q 002430 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 600 aLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~ 635 (923)
|++.|+.|+||+++.+.+|+.||+|..+++-..+..
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~ 213 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVE 213 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhh
Confidence 999999999999999999999999987655545443
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.62 E-value=1e-07 Score=94.29 Aligned_cols=105 Identities=26% Similarity=0.381 Sum_probs=81.4
Q ss_pred HHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHH
Q 002430 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (923)
Q Consensus 501 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 580 (923)
+|++|++.|+++.++||+....+..+.+++|+..- |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 99999999999999999999999999999998531 1111 234444444
Q ss_pred Hhh----CCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCC----chhHHHHH
Q 002430 581 LQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAV 637 (923)
Q Consensus 581 lq~----~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~----~~~i~~~i 637 (923)
+.+ ....|.|+||+.||.+|++.|+++++|.++.+..+..||+++..+. |..+.+.+
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCELL 148 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 332 3456999999999999999999999999888889999999997553 44444443
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.8e-07 Score=98.06 Aligned_cols=154 Identities=23% Similarity=0.236 Sum_probs=107.0
Q ss_pred EEeccCCC-CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC---------CCCcc-------------
Q 002430 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY---------PSSSL------------- 542 (923)
Q Consensus 486 G~i~i~D~-lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~---------~~~~l------------- 542 (923)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... ..+.+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444554 88999999999999999999999999999999999999964100 00000
Q ss_pred --------------cCcc------cc--------------------c----------ccCcchHHHHh---hh-----cC
Q 002430 543 --------------LGQD------KD--------------------A----------SIAALPVDELI---EK-----AD 564 (923)
Q Consensus 543 --------------~~~~------~~--------------------~----------~~~~~~~~~~~---~~-----~~ 564 (923)
.... .. . ....+.+.+.. .+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0000 00 0 00001111111 11 11
Q ss_pred eE-------EecCh--hhHHHHHHHHhhC-CCE---EEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCch
Q 002430 565 GF-------AGVFP--EHKYEIVKRLQER-KHI---CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 631 (923)
Q Consensus 565 vf-------ar~sP--~~K~~iV~~lq~~-g~~---V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~ 631 (923)
.+ ..+.| .+|..-++.+.+. |.. |+++||+.||.+||+.|+.||||+++.+.+++.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 22 23333 3688888888763 543 99999999999999999999999999999999999888888888
Q ss_pred hHHHHHHH
Q 002430 632 VIISAVLT 639 (923)
Q Consensus 632 ~i~~~i~~ 639 (923)
.+..++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 88888754
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.7e-07 Score=98.46 Aligned_cols=66 Identities=23% Similarity=0.222 Sum_probs=54.8
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.|..-++.|.+. | .-|+++|||.||.+||+.|++|+||++|.+.+|++||+|..+++=..+..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 466666655543 2 45899999999999999999999999999999999999998777777777764
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.6e-07 Score=96.12 Aligned_cols=118 Identities=20% Similarity=0.188 Sum_probs=84.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe-cC
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 570 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar-~s 570 (923)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...... .+...+ ...++ .+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an--~l~~~d--G~ltG----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVAN--ELEIDD--GKLTG----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheee--EEEEeC--CEEec----------eeeeeecC
Confidence 67899999999999999999999999999999999999999653211 110000 00111 12333 34
Q ss_pred hhhHHHHHHHHhhC-CC---EEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEE
Q 002430 571 PEHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624 (923)
Q Consensus 571 P~~K~~iV~~lq~~-g~---~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADiv 624 (923)
.+.|...++.+.+. |. .+.++|||.||.|||+.|+.+|++.......+ .|+..
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~-~a~~~ 198 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRA-LADVR 198 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHH-HHHHh
Confidence 57899888666653 54 48899999999999999999999974433333 44443
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.51 E-value=6.9e-07 Score=94.25 Aligned_cols=140 Identities=22% Similarity=0.303 Sum_probs=95.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC--CCCcc-cCc--------ccc-------------
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSSL-LGQ--------DKD------------- 548 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~--~~~~l-~~~--------~~~------------- 548 (923)
.+.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... ....+ ... ...
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 377889999999999999999999999999999999999643110 00000 000 000
Q ss_pred --c----c-------------cCcchHHHHhhhcC---------eEEecCh--hhHHHHHHHHhhC-C---CEEEEEcCC
Q 002430 549 --A----S-------------IAALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQER-K---HICGMTGDG 594 (923)
Q Consensus 549 --~----~-------------~~~~~~~~~~~~~~---------vfar~sP--~~K~~iV~~lq~~-g---~~V~m~GDG 594 (923)
. . .+.+.+.+++++.. .+..+.| ..|..-++.+.++ | ..|.++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 0 00011122222211 1223334 3788888877653 3 458999999
Q ss_pred ccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchh
Q 002430 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 632 (923)
Q Consensus 595 ~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~ 632 (923)
.||.+|++.|++|+||+++.+..|+.||+|..+++-..
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G 212 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEG 212 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCc
Confidence 99999999999999999999999999999987666656
|
catalyze the same reaction as SPP. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=5.3e-07 Score=98.20 Aligned_cols=66 Identities=18% Similarity=0.181 Sum_probs=54.3
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCE--EecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADi--vl~~~~~~~i~~~i~ 638 (923)
.|..-++.|.+. | .-|+++|||-||.+||+.|+.||||++|.+.+|++||. |..+++-..+..+++
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 477777777654 3 35899999999999999999999999999999999996 666666667776663
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=8.6e-07 Score=92.14 Aligned_cols=127 Identities=20% Similarity=0.223 Sum_probs=90.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|+++ +++.++|+-....+..+.+++|+..- +.. .+...+.. ...+ +.-..|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~-f~~-~~~~~~~~-~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTL-FCH-SLEVDEDG-MITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchh-hcc-eEEECCCC-eEEC------------ccccccc
Confidence 4689999999999999 99999999999999999999998531 111 11000000 0000 0012478
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCE-EecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADi-vl~~~~~~~i~~~i 637 (923)
.|...++.++..+..+.|+|||.||.+|.+.|++|+..+.+.+.....++. ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 899999999988899999999999999999999999887544444455665 43 4566655444
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=9.3e-07 Score=95.91 Aligned_cols=66 Identities=20% Similarity=0.227 Sum_probs=52.8
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccC--EEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aAD--ivl~~~~~~~i~~~i~ 638 (923)
.|..-++.+.+. | .-|+++|||-||.+||+.|+.|+||++|.+.+|++|| .|..+++=..+..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466666665543 2 3489999999999999999999999999999999988 6776666667766663
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.1e-06 Score=89.65 Aligned_cols=108 Identities=23% Similarity=0.287 Sum_probs=82.1
Q ss_pred HHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHH
Q 002430 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (923)
Q Consensus 500 ~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~ 579 (923)
.+|+.|++.|+++.++||.....+..+++++|+..- |. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 699999999999999999999999999999997421 11 1234545544
Q ss_pred HHh-hCC---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCC----CchhHHHHHHH
Q 002430 580 RLQ-ERK---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP----GLSVIISAVLT 639 (923)
Q Consensus 580 ~lq-~~g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~----~~~~i~~~i~~ 639 (923)
.+. +.| .-|+|+||+.||.+|++.|+++++++++.+..+..||+++-.+ .+..+.+.+..
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 443 333 4699999999999999999999999888888888999998532 23444444433
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.40 E-value=9.9e-07 Score=91.20 Aligned_cols=117 Identities=26% Similarity=0.386 Sum_probs=84.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+.. .+....... + .... +-+.+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~-~-~g~~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFD-E-KGFI----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEc-C-CCeE----------ecceeeEEccc
Confidence 589999999999999999999999999999999999999743 111111100 0 0000 00122334577
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccC
Q 002430 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 622 (923)
Q Consensus 573 ~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aAD 622 (923)
.|..+++.+.++ ...+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 788787776543 23589999999999999999999999755555666666
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.3e-06 Score=93.14 Aligned_cols=146 Identities=18% Similarity=0.229 Sum_probs=99.0
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC-CCCccc---------------------------
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL--------------------------- 543 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~-~~~~l~--------------------------- 543 (923)
..+.+.+.++|++++++|+++.+.||.....+..+..++++..... ....+.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 4467899999999999999999999999999999999999852100 000000
Q ss_pred ---------------Ccc--ccc------------------------------ccCcchHHHH-------hhhcCe----
Q 002430 544 ---------------GQD--KDA------------------------------SIAALPVDEL-------IEKADG---- 565 (923)
Q Consensus 544 ---------------~~~--~~~------------------------------~~~~~~~~~~-------~~~~~v---- 565 (923)
... ... ..+.+.+.++ ......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 000 000 0001111111 111101
Q ss_pred ---EEecCh--hhHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHH
Q 002430 566 ---FAGVFP--EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (923)
Q Consensus 566 ---far~sP--~~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~ 636 (923)
+-.++| ..|..-++.+.+. ...+.++||+.||.+||+.|+.|+||+++++..+..||++....+=..+.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 223444 5798888888753 3568899999999999999999999999999999999999987655666654
Q ss_pred H
Q 002430 637 V 637 (923)
Q Consensus 637 i 637 (923)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 3
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.5e-06 Score=88.30 Aligned_cols=135 Identities=13% Similarity=0.067 Sum_probs=86.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccC-cccccccCcchHHHHhhhcCeE--Ee
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG-QDKDASIAALPVDELIEKADGF--AG 568 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~vf--ar 568 (923)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.....+......+ .......+ ....+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p---------~~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWP---------HPCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCC---------CCCcccccc
Confidence 46899999999999999999999999999888888888754332221111111 10000000 00000 00
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHh--hccCEEecCCCchhHHHHH
Q 002430 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~--~aADivl~~~~~~~i~~~i 637 (923)
-....|..+++.++.....|.|+|||.||.+|++.||+++|=+.-.+-.+ .-+.+.+ ++|..+...+
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l 208 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKEL 208 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHH
Confidence 01357999999998887888999999999999999999777542111111 1122222 5677776665
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.31 E-value=0.00014 Score=84.86 Aligned_cols=100 Identities=15% Similarity=0.202 Sum_probs=74.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
|++|++.+.++++++.|+++.++|+-+...+..+++++|+.+. +.+.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------Vigsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------VFASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE------EEeCCC------------------ccccCCc
Confidence 5789999999999999999999999999999999999997321 111111 1135677
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAA 617 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A 617 (923)
.|.+.++.....+ -+.++||..||.|+++.|+-.++++.+...+
T Consensus 128 ~K~~~l~~~l~~~-~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~ 171 (479)
T PRK08238 128 AKAAALVEAFGER-GFDYAGNSAADLPVWAAARRAIVVGASPGVA 171 (479)
T ss_pred hHHHHHHHHhCcc-CeeEecCCHHHHHHHHhCCCeEEECCCHHHH
Confidence 7866544322222 2578999999999999999999998554443
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.3e-06 Score=91.84 Aligned_cols=66 Identities=24% Similarity=0.343 Sum_probs=54.0
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.|..-++.+.++ | .-|+++||+.||.+|++.|++|+||+++.+..+++||++..+++=..+..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466655555432 3 35899999999999999999999999888888999999998877778877774
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.30 E-value=9.6e-07 Score=90.52 Aligned_cols=92 Identities=24% Similarity=0.297 Sum_probs=71.0
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh-h-
Q 002430 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE-H- 573 (923)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~-~- 573 (923)
+++.+.|+.++++|++++++||+....+..+++.+|+.... +.+.+... -. +.....+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-----v~~~~~~~-~~---------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-----VIGNELFD-NG---------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-----EEEEEEEC-TT---------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-----EEEEeeee-cc---------cceeeeeECCCCCC
Confidence 88889999999999999999999999999999999996421 11111100 00 12246666666 5
Q ss_pred -HHHHHHHH------hhCCCEEEEEcCCccChHhhh
Q 002430 574 -KYEIVKRL------QERKHICGMTGDGVNDAPALK 602 (923)
Q Consensus 574 -K~~iV~~l------q~~g~~V~m~GDG~NDapaLk 602 (923)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999996
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.1e-06 Score=100.22 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=47.5
Q ss_pred EEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 587 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 587 ~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
-|.++|||.||.+||+.|+.||||++|.+.+|++||+|..+++=..+..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4889999999999999999999999999999999999988777777777774
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.6e-06 Score=83.57 Aligned_cols=109 Identities=23% Similarity=0.223 Sum_probs=76.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhh
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 573 (923)
+-|++++.++.||+.|.+|.++||--...+..+|.++||+........+.=. .+....+ ++.. -.-+...-
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd-~~Gk~~g--fd~~------~ptsdsgg 159 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFD-KDGKYLG--FDTN------EPTSDSGG 159 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeec-cCCcccc--cccC------CccccCCc
Confidence 4689999999999999999999999999999999999997532222221000 0000000 0000 00112357
Q ss_pred HHHHHHHHhhC--CCEEEEEcCCccChHhhhcCCeeeEec
Q 002430 574 KYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA 611 (923)
Q Consensus 574 K~~iV~~lq~~--g~~V~m~GDG~NDapaLk~AdVGIamg 611 (923)
|.+++..+++. -..++|+|||+||.+|+.-||-=|+.+
T Consensus 160 Ka~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 160 KAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 99999999985 457899999999999999977666654
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.22 E-value=5.9e-06 Score=89.11 Aligned_cols=63 Identities=24% Similarity=0.284 Sum_probs=53.1
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~ 635 (923)
.|..-++.+.+. | ..++++||+.||.+|++.|+.|+||+++.+..++.||++..+++-..+..
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhh
Confidence 588888877664 2 46899999999999999999999999999999999999998766555544
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.8e-05 Score=85.30 Aligned_cols=66 Identities=20% Similarity=0.207 Sum_probs=51.1
Q ss_pred hHHHHHHHHhhC------CCEEEEEcCCccChHhhhcCCeeeEeccch---HHHhhc--c-CEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~------g~~V~m~GDG~NDapaLk~AdVGIamg~gt---d~A~~a--A-Divl~~~~~~~i~~~i~ 638 (923)
.|..-++.+.+. ...|.++||+.||.+|++.|+.||||+++. +..|+. | ++|...++-..+..+++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 566666655443 456999999999999999999999999887 467775 4 58777777777777764
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.13 E-value=2e-05 Score=83.09 Aligned_cols=131 Identities=21% Similarity=0.290 Sum_probs=83.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC-CCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +.+........ +....+... .... ..+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~--~g~~~g~~~------~~~~--~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGD--SGEYAGFDE------NEPT--SRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcC--CCcEECccC------CCcc--cCC
Confidence 378999999999999999999999999999999999999863 22111000000 000000000 0000 112
Q ss_pred hhHHHHHHHHhhC-C-CEEEEEcCCccChHhhhc--CCeeeEeccc--hHHHhhccCEEecCCCchhHHH
Q 002430 572 EHKYEIVKRLQER-K-HICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 572 ~~K~~iV~~lq~~-g-~~V~m~GDG~NDapaLk~--AdVGIamg~g--td~A~~aADivl~~~~~~~i~~ 635 (923)
..|.+.++.+.++ | ..+.|+||+.||..|.+. ++++++.+.+ .+.....+|+++. ++..+..
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 4477777777654 2 468899999999999777 5776666532 2333456899984 4555544
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.3e-05 Score=81.70 Aligned_cols=113 Identities=16% Similarity=0.074 Sum_probs=75.8
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcch-HHHHhhhcCeEEe-c
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALP-VDELIEKADGFAG-V 569 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~vfar-~ 569 (923)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+.... ..++ +.+... ++.. +.-...+..++.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~~--~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIY-SNPASF--DNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEe-ccCceE--CCCCcEEEecCCCCccCcCC
Confidence 378999999999999999999999999999999999999885321 0111 111100 0000 0000000001111 1
Q ss_pred ChhhHHHHHHHHhhC-CCEEEEEcCCccChHhhhcCCeeeE
Q 002430 570 FPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIA 609 (923)
Q Consensus 570 sP~~K~~iV~~lq~~-g~~V~m~GDG~NDapaLk~AdVGIa 609 (923)
....|.++++.++++ ...+.|+|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123599999999887 8889999999999999999987554
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.2e-05 Score=76.69 Aligned_cols=113 Identities=24% Similarity=0.401 Sum_probs=86.5
Q ss_pred HHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHH
Q 002430 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (923)
Q Consensus 500 ~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~ 579 (923)
-.|+.+.++||+|.+|||.+......-|+++||..- ..| -++|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~------~qG--------------------------~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL------YQG--------------------------ISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee------eec--------------------------hHhHHHHHH
Confidence 478999999999999999999999999999998421 111 256766666
Q ss_pred HHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCC----chhHHHHHHHhHHHH
Q 002430 580 RLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIF 644 (923)
Q Consensus 580 ~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~----~~~i~~~i~~gR~~~ 644 (923)
.|.++ -.-|+++||-.||-|+|++...++|+.++..-.++.||+|+...+ +..+.+.|...+..+
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~ 162 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKL 162 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcH
Confidence 55543 346899999999999999999999999998888999999986543 334444444444433
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.03 E-value=4.3e-05 Score=83.16 Aligned_cols=67 Identities=21% Similarity=0.150 Sum_probs=50.4
Q ss_pred hHHHHHHHHhh-------CCCEEEEEcCCccChHhhhcCCeeeEeccch-H---H--HhhccCEEecCCCchhHHHHHHH
Q 002430 573 HKYEIVKRLQE-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-D---A--ARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 573 ~K~~iV~~lq~-------~g~~V~m~GDG~NDapaLk~AdVGIamg~gt-d---~--A~~aADivl~~~~~~~i~~~i~~ 639 (923)
.|..-++.|.+ ....|.++|||-||.+||+.|++||||+++. + + -+..+|++....+-..+..++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~ 266 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDH 266 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHH
Confidence 56666665544 2346899999999999999999999998443 2 1 34478999888877788877753
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.4e-05 Score=80.79 Aligned_cols=100 Identities=23% Similarity=0.278 Sum_probs=70.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhh
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 573 (923)
++|++.+.++.+++.|+++.++||.....+..+++.+|+.. .+... +... .+....+. ...-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~-~~~~-~~g~~~g~--------~~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANR-LEFD-DNGLLTGP--------IEGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeee-EEEC-CCCEEeCc--------cCCcccCCcch
Confidence 68999999999999999999999999999999999999853 11111 1000 00000000 00001245688
Q ss_pred HHHHHHHHhhC----CCEEEEEcCCccChHhhhcC
Q 002430 574 KYEIVKRLQER----KHICGMTGDGVNDAPALKKA 604 (923)
Q Consensus 574 K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~A 604 (923)
|..+++.++++ ...+.++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99999887654 34589999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=7.6e-05 Score=81.32 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=50.3
Q ss_pred hHHHHHHHHhh----CC-CEEEEEcCCccChHhhhcCCeeeEeccchHHHh----hcc-CEEe--cCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQE----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~----~g-~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~----~aA-Divl--~~~~~~~i~~~i~ 638 (923)
.|..-++.+.+ .. .-|+++||+.||.+|++.|++|++|++|.+..| .+| +.+. ..++=..+..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56666665553 24 789999999999999999999999999999888 666 6666 3444556666653
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.9e-05 Score=80.67 Aligned_cols=133 Identities=12% Similarity=0.079 Sum_probs=83.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCC-CCCCC-cccCcccccccCcchHHHHhhhcCe--EEe
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN-MYPSS-SLLGQDKDASIAALPVDELIEKADG--FAG 568 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~-~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~v--far 568 (923)
+++||+.+.++.|++.|+++.++||-....+..+.+++ +... .+... ...+.......+. ... +..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~---------p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPH---------PCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccC---------Cccccccc
Confidence 58999999999999999999999999998899988887 6431 11000 0111100000000 000 000
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHH--hhccCEEecCCCchhHHHHH
Q 002430 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAA--RSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A--~~aADivl~~~~~~~i~~~i 637 (923)
-....|..+++.++.....|.|+|||.||.+|.+.||+.++-+.-.+.+ +.-+.+.+ ++|..+...+
T Consensus 144 ~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 0013488899988877778999999999999999999977733111221 22233333 4566666655
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=8.9e-05 Score=78.13 Aligned_cols=125 Identities=17% Similarity=0.180 Sum_probs=87.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
.++.||+.+.++.|++.|+++.++||........+.++.|+.... . .+.+.+. +.+..|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~--~~~~~~~------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF-S--VVIGGDS------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-c--EEEcCCC------------------CCCCCc
Confidence 458899999999999999999999999999999999999985321 1 1111100 111222
Q ss_pred --hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEecc----chHHHhhccCEEecCCCchhHHHHHHH
Q 002430 572 --EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 572 --~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~----gtd~A~~aADivl~~~~~~~i~~~i~~ 639 (923)
+--..+.+.++.....+.|+||+.||+.|.+.|++ +|++.. ..+.....+|+++ +++..+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 22234445555455678999999999999999999 666642 2344455788888 678888877654
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.83 E-value=4.5e-05 Score=79.01 Aligned_cols=109 Identities=16% Similarity=0.079 Sum_probs=77.0
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecC
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~s 570 (923)
..+++|++.+.|+.+++.|+++.++||-....+..+++.+|+.. .......... +....+... --.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~--~g~~~g~~~---------~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESE--DGIYTGNID---------GNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcC--CCEEeCCcc---------CCCCC
Confidence 34689999999999999999999999999999999999999853 1111111000 000000000 01234
Q ss_pred hhhHHHHHHHHhh-CCC---EEEEEcCCccChHhhhcCCeeeEec
Q 002430 571 PEHKYEIVKRLQE-RKH---ICGMTGDGVNDAPALKKADIGIAVA 611 (923)
Q Consensus 571 P~~K~~iV~~lq~-~g~---~V~m~GDG~NDapaLk~AdVGIamg 611 (923)
++.|...++.+.+ .+. .+.++||+.||.|+++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 6788887876654 342 6889999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.71 E-value=7.7e-05 Score=71.00 Aligned_cols=118 Identities=15% Similarity=0.051 Sum_probs=77.0
Q ss_pred ccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 489 ~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
.-..++++++.+.+++|++.|++++++||.....+....+++|+... ....+........ ..............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIY-YPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhh-cccccccccccccccCC
Confidence 34458999999999999999999999999999999999999987321 0111100000000 00000000111123345
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhc-CCeeeE
Q 002430 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKK-ADIGIA 609 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~-AdVGIa 609 (923)
-.|+.+..+.+.++.....+.++||+.||..|.+. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 56667777777776666789999999999999998 554544
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00022 Score=75.09 Aligned_cols=126 Identities=18% Similarity=0.208 Sum_probs=91.6
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecC
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~s 570 (923)
...+-|+++++++.|+++|++..++|++....+..+.+..|+..-. ..+.|.+.. -...-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~~----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDV----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCCC----------------CCCCcC
Confidence 4567899999999999999999999999999999999999986431 111111100 011124
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCC---eeeEecc--chHHHhhccCEEecCCCchhHHHHH
Q 002430 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 571 P~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~Ad---VGIamg~--gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
|+......+.+....+.+.||||..||..|=|+|+ ||+..|. +.......+|+++ +++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 55666666666555447999999999999999998 6666662 4566777799998 5566666554
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00029 Score=73.21 Aligned_cols=124 Identities=18% Similarity=0.172 Sum_probs=82.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++.|+++.++||.....+...-+..|+.... + ..+ +.+.. ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-~-~i~-~~~~~----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-D-HVI-GSDEV----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-e-eEE-ecCcC----------------CCCCCChH
Confidence 67899999999999999999999999988888888888885311 0 111 10000 01111232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE-e--c--cchHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--A--DATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa-m--g--~gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
-=..+++.++-....+.|+||+.+|..+-++|++... + | +..+..+..+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 2234444444345669999999999999999998643 3 3 22344567899988 4555665543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00091 Score=72.79 Aligned_cols=125 Identities=16% Similarity=0.160 Sum_probs=80.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
.++.|++.++++.|++.|+++.++||-....+..+..+.|+.... + .+.+.+.. ....-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-~--~i~~~d~~----------------~~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-R--WIIGGDTL----------------PQKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-e--EEEecCCC----------------CCCCCCc
Confidence 468899999999999999999999999988888888888874311 0 11111000 0000111
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEecc----chHHHhhccCEEecCCCchhHHHHH
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~----gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
+-=..+.+.+.-....+.|+||+.||..|.++|++ .+++.. ..+.....+|+++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 11122333332234568999999999999999997 345432 2333455799988 4576666544
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00091 Score=71.82 Aligned_cols=147 Identities=16% Similarity=0.165 Sum_probs=93.2
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCC--C-C-CCcc-cCc-c-c-----------------
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--Y-P-SSSL-LGQ-D-K----------------- 547 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~--~-~-~~~l-~~~-~-~----------------- 547 (923)
.+..|...++|+++++.|+.++..||-.....+.+.+++++.... . . ...+ ... . .
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456789999999999999999999999999999999988875420 0 0 0000 000 0 0
Q ss_pred ----------------cc-------ccCcch----H---HHHhhhc--Ce---EE-----ecCh--hhHHHHHHHHhhC-
Q 002430 548 ----------------DA-------SIAALP----V---DELIEKA--DG---FA-----GVFP--EHKYEIVKRLQER- 584 (923)
Q Consensus 548 ----------------~~-------~~~~~~----~---~~~~~~~--~v---fa-----r~sP--~~K~~iV~~lq~~- 584 (923)
.. ....+. + .+.+.+. .+ ++ .+.| ..|..-++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 00 000001 1 1111111 11 11 3344 4788888888664
Q ss_pred ---CCEEEEEcCCccChHhhhc-CCeeeEeccchHHHhhccC-------EEecCCCchhHHHHHH
Q 002430 585 ---KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 638 (923)
Q Consensus 585 ---g~~V~m~GDG~NDapaLk~-AdVGIamg~gtd~A~~aAD-------ivl~~~~~~~i~~~i~ 638 (923)
...|.++||+.||.+|++. ++.|++|+++.+..++.+| ++-....-..+..+++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3568999999999999998 7799999998887775443 4333334455555553
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00093 Score=70.52 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=38.5
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 533 (923)
.+..-+++.++|++|++.|+++++.||-....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4555667999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.001 Score=69.55 Aligned_cols=124 Identities=18% Similarity=0.131 Sum_probs=81.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|++.|+++.++||.....+..+-+..|+..-. .. +.+.+.. -...-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~-i~~~~~~----------------~~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DV-VITLDDV----------------EHAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eE-EEecCcC----------------CCCCCCcH
Confidence 36799999999999999999999999999999888999985321 11 1111100 00111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeee---Eeccc--hHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI---AVADA--TDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGI---amg~g--td~A~~aADivl~~~~~~~i~~~i 637 (923)
-=.++.+.++-....+.|+||..+|..|-++|++-. .-+.+ .+.....+|+++ +++..++..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 233444444434456899999999999999999843 22311 223445688887 4677776654
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0013 Score=68.57 Aligned_cols=119 Identities=16% Similarity=0.171 Sum_probs=77.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh-
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP- 571 (923)
++.|++.++++.|++.|+++.++|+-....+..+.++.|+.... + .+.+.+. ..+..|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~--~~~~~~~------------------~~~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-S--VLIGGDS------------------LAQRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-c--EEEecCC------------------CCCCCCC
Confidence 57899999999999999999999999999999999999985321 1 1111110 011122
Q ss_pred -hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe-ccc----hHHHhhccCEEecCCCchhHH
Q 002430 572 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADA----TDAARSASDIVLTEPGLSVII 634 (923)
Q Consensus 572 -~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam-g~g----td~A~~aADivl~~~~~~~i~ 634 (923)
+-=....+.+.-....+.|+||..||..|.++|++-... ..| .......+|+++ +++..+.
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~ 210 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP 210 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence 111222333332335689999999999999999986543 221 123334688887 4455544
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.00051 Score=73.08 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=54.3
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccC----EEecCCCchhHHHHHH
Q 002430 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVL 638 (923)
Q Consensus 572 ~~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aAD----ivl~~~~~~~i~~~i~ 638 (923)
..|...++.+.++ | .-|+++||+.||.+|++.|+.||+|+++.+..++.|| +|...++=..+..++.
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 3788888887654 3 2478999999999999999999999999999999999 7765555556777664
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0039 Score=67.54 Aligned_cols=131 Identities=11% Similarity=0.112 Sum_probs=81.0
Q ss_pred CCCccHHHHHHHHHh-CCCEEEEEccCChHHHHHHHHHhCCC--C-C---CC--CCC----ccc----------------
Q 002430 493 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMG--T-N---MY--PSS----SLL---------------- 543 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~-aGI~v~mlTGD~~~tA~~ia~~~Gi~--~-~---~~--~~~----~l~---------------- 543 (923)
.+-+++.++|++|++ .|+.++++||..........+.+++. . + .. ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 79999999999999888887766641 1 1 00 000 000
Q ss_pred ---Ccccc----------cccC--cchHHHHh----hhcC--------eEEecChh--hHHHHHHHHhhC----CCEEEE
Q 002430 544 ---GQDKD----------ASIA--ALPVDELI----EKAD--------GFAGVFPE--HKYEIVKRLQER----KHICGM 590 (923)
Q Consensus 544 ---~~~~~----------~~~~--~~~~~~~~----~~~~--------vfar~sP~--~K~~iV~~lq~~----g~~V~m 590 (923)
|...+ ...+ .+.+.++. +... .+-.+.|. +|..-++.+.+. ...|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00000 0000 01111111 1111 12334443 788888776543 356889
Q ss_pred EcCCccChHhhhcC----CeeeEeccchHHHhhccCEEecC
Q 002430 591 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTE 627 (923)
Q Consensus 591 ~GDG~NDapaLk~A----dVGIamg~gtd~A~~aADivl~~ 627 (923)
+||+.||.+|++.+ +.||+||++. ..|++.|.+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~ 232 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG 232 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC
Confidence 99999999999999 9999999764 457788754
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0038 Score=65.63 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=35.5
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002430 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (923)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 533 (923)
+.+.++|+++++.|+++.++||-....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0086 Score=64.46 Aligned_cols=132 Identities=11% Similarity=0.077 Sum_probs=83.4
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe---
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar--- 568 (923)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+..... .+......-.-+ .+...
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~---~IvSN~L~f~~d-----------GvltG~~~ 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV---KVVSNFMDFDED-----------GVLKGFKG 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc---eEEeeeEEECCC-----------CeEeCCCC
Confidence 4679999999999999999999999999999999999999853210 110000000000 00111
Q ss_pred --cChhhHHHHHHH-----Hh--hCCCEEEEEcCCccChHhhhcC---CeeeEec--c-c----hHHHhhccCEEecCCC
Q 002430 569 --VFPEHKYEIVKR-----LQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--D-A----TDAARSASDIVLTEPG 629 (923)
Q Consensus 569 --~sP~~K~~iV~~-----lq--~~g~~V~m~GDG~NDapaLk~A---dVGIamg--~-g----td~A~~aADivl~~~~ 629 (923)
+....|.+.+.. ++ .....|.|+|||.||++|-.-. +--+.+| + - -+.=+++=||||.+|.
T Consensus 186 P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~ 265 (277)
T TIGR01544 186 PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDE 265 (277)
T ss_pred CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCC
Confidence 011346554432 22 1235688999999999996544 2233333 2 1 2335678999999987
Q ss_pred chhHHHHH
Q 002430 630 LSVIISAV 637 (923)
Q Consensus 630 ~~~i~~~i 637 (923)
=-.++.+|
T Consensus 266 t~~v~~~i 273 (277)
T TIGR01544 266 TLEVANSI 273 (277)
T ss_pred CchHHHHH
Confidence 66777665
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0031 Score=66.41 Aligned_cols=119 Identities=14% Similarity=0.151 Sum_probs=76.8
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
-++.||+.++++.|++.|+++.++|+........+.++.|+..-. ...+.+ +. .....|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~-~~------------------~~~~Kp 149 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASA-EK------------------LPYSKP 149 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEc-cc------------------CCCCCC
Confidence 357899999999999999999999999999999999999985421 111111 00 001112
Q ss_pred hhHHHHHHHHhhCC---CEEEEEcCCccChHhhhcCCeeeEe-ccc---hHHHhhccCEEecCCCchhHH
Q 002430 572 EHKYEIVKRLQERK---HICGMTGDGVNDAPALKKADIGIAV-ADA---TDAARSASDIVLTEPGLSVII 634 (923)
Q Consensus 572 ~~K~~iV~~lq~~g---~~V~m~GDG~NDapaLk~AdVGIam-g~g---td~A~~aADivl~~~~~~~i~ 634 (923)
.-. -+-+.+++.| ..|.|+||..||+.|-++|++.... ..+ .+.-...+|+++ .+|..+.
T Consensus 150 ~~~-~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 150 HPE-VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred CHH-HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 111 2333344333 4589999999999999999987554 322 212223577776 3455543
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.007 Score=65.81 Aligned_cols=118 Identities=11% Similarity=0.095 Sum_probs=79.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++.|+++.++|+.....+..+-+.+|+.... . .++.+ ...+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~-----------------------~~~~~ 196 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAG-----------------------TPILS 196 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEec-----------------------CCCCC
Confidence 56799999999999999999999999999999999999985321 1 11111 00011
Q ss_pred hHHHHHHHHhh---CCCEEEEEcCCccChHhhhcCCeeeEe-ccc--h--HHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIGIAV-ADA--T--DAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~---~g~~V~m~GDG~NDapaLk~AdVGIam-g~g--t--d~A~~aADivl~~~~~~~i~~~i 637 (923)
.+.-+.+.+++ ....++|+||+.+|..|-++|++-... ..| + +.....+|+++ +++..+...+
T Consensus 197 k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 197 KRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 12222233333 235689999999999999999886432 222 2 23344689988 5677776654
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0044 Score=65.04 Aligned_cols=121 Identities=18% Similarity=0.197 Sum_probs=78.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC-CCCCCCcccCcccccccCcchHHHHhhhcCeEEecC
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~s 570 (923)
.++.||+.+.++.|++.|+++.++||-....+..+-+..|+.. +..+ ..+... . ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~-~i~~~~-~------------------~~~~K 145 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD-AVVCPS-D------------------VAAGR 145 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC-EEEcCC-c------------------CCCCC
Confidence 4789999999999999999999999999999999999999851 1111 111111 0 00112
Q ss_pred hhhHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeee--Eeccch----HHHhhccCEEecCCCchhHHH
Q 002430 571 PEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGI--AVADAT----DAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 571 P~~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGI--amg~gt----d~A~~aADivl~~~~~~~i~~ 635 (923)
|... .+-+.+++. ...+.|+||+.+|..|-++|++.. ++..|. ......+|.++ +++..+..
T Consensus 146 P~p~-~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 146 PAPD-LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred CCHH-HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 3211 222333332 256999999999999999999986 343321 22234578777 45555544
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0043 Score=65.72 Aligned_cols=123 Identities=15% Similarity=0.125 Sum_probs=80.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+.... ..+.+.+.. ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f---~~i~~~~~~----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC---AVLIGGDTL----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc---cEEEecCcC----------------CCCCCCHH
Confidence 57899999999999999999999999988888888888875321 111111100 01111232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeee-Eeccc----h-HHHhhccCEEecCCCchhHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADA----T-DAARSASDIVLTEPGLSVIISA 636 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGI-amg~g----t-d~A~~aADivl~~~~~~~i~~~ 636 (923)
-=..+.+.+.-...-+.|+||+.||..|-++|++-. ++..| . ......+|+++ +++..+...
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~ 223 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNP 223 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHH
Confidence 223445555444566999999999999999998874 33221 1 12234689988 455555543
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0076 Score=62.96 Aligned_cols=107 Identities=13% Similarity=0.044 Sum_probs=74.7
Q ss_pred CCCccHHHHH-HHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I-~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+.. ...+.+.+.+....+. . .-..+.-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~----~~~~i~t~l~~~~tg~--------~-~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP----RVNLIASQMQRRYGGW--------V-LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc----cCceEEEEEEEEEccE--------E-CCccCCC
Confidence 4589999999 57888999999999999999999999999621 0111222211110000 0 0123567
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCccChHhhhcCCeeeEecc
Q 002430 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (923)
Q Consensus 572 ~~K~~iV~~l-q~~g~~V~m~GDG~NDapaLk~AdVGIamg~ 612 (923)
+.|.+-++.. .......-+-||..||.|+|+.|+-.+++..
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 8898877644 3334455678999999999999999999974
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0028 Score=65.34 Aligned_cols=94 Identities=17% Similarity=0.081 Sum_probs=66.5
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecC
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~s 570 (923)
.+++.+++.++++.|++.|+++.++||-....+..+-+++|+..-. ...+ +.+. +..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~-~~~~-----------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQI-WMED-----------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEE-eecC-----------------CCCCcC
Confidence 4557788899999999999999999999999999999999985321 1111 1100 111333
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcC
Q 002430 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (923)
Q Consensus 571 P~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~A 604 (923)
|+--..+.+.+.-...-|.|+||+.+|+.|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 4444555555555556799999999999887664
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.016 Score=62.49 Aligned_cols=42 Identities=7% Similarity=-0.004 Sum_probs=38.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~ 534 (923)
..-+.+.++|++|++.||.+++.||-.......+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455679999999999999999999999999999999999853
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.016 Score=62.97 Aligned_cols=93 Identities=15% Similarity=0.071 Sum_probs=62.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..-.. ..+.+.+. ..+..|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~--d~i~~~~~------------------~~~~KP- 159 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP--DHVVTTDD------------------VPAGRP- 159 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc--eEEEcCCc------------------CCCCCC-
Confidence 467999999999999999999999999888877777777643110 11111110 001122
Q ss_pred hHHHHHHHHhhCC----CEEEEEcCCccChHhhhcCCe
Q 002430 573 HKYEIVKRLQERK----HICGMTGDGVNDAPALKKADI 606 (923)
Q Consensus 573 ~K~~iV~~lq~~g----~~V~m~GDG~NDapaLk~AdV 606 (923)
+..-+.+.+++.| .-+.|+||..+|..|-++|++
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 1223344444433 458999999999999999997
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.012 Score=63.43 Aligned_cols=120 Identities=18% Similarity=0.109 Sum_probs=76.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+..-. ..++.+.+.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 46899999999999999999999999999999998899985321 1111111100 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeee-Ee-ccchHHHhhccCEEecCCCchhH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTEPGLSVI 633 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGI-am-g~gtd~A~~aADivl~~~~~~~i 633 (923)
-=....+.+.-....+.|+||..+|..|-++|++-. ++ +.........+|+++ ++++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 112333333333456899999999999999999843 33 322222333578887 345444
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.011 Score=61.77 Aligned_cols=106 Identities=12% Similarity=0.028 Sum_probs=73.6
Q ss_pred CCCccHHHHHH-HHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~-~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
.++|++.++|+ .+++.|++++++|+=....+..+|+..|+... ..+.+.+.+.. ++- .. .=..|.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~t~le~~-~gg-------~~-~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIASQIERG-NGG-------WV-LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEEEEeEEe-CCc-------eE-cCccCCC
Confidence 46899999996 78889999999999999999999998665221 11112211100 000 00 0123567
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCccChHhhhcCCeeeEec
Q 002430 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVA 611 (923)
Q Consensus 572 ~~K~~iV~~l-q~~g~~V~m~GDG~NDapaLk~AdVGIamg 611 (923)
++|.+-++.. .......-+=||..||.|||+.||-.+++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 8898877644 323344568899999999999999999996
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.017 Score=62.00 Aligned_cols=94 Identities=17% Similarity=0.130 Sum_probs=65.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|++.|+++.++||.....+..+-++.|+..... ..+.+.+. ..+-.|.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~--d~ii~~~~------------------~~~~KP~ 158 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP--DYNVTTDD------------------VPAGRPA 158 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC--ceEEcccc------------------CCCCCCC
Confidence 467999999999999999999999999999988888888754211 11111111 0011231
Q ss_pred hHHHHHHHHhhCC----CEEEEEcCCccChHhhhcCCee
Q 002430 573 HKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 573 ~K~~iV~~lq~~g----~~V~m~GDG~NDapaLk~AdVG 607 (923)
...+.+++++.| +.+.|+||..+|..|-+.|++-
T Consensus 159 -p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 159 -PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred -HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 223344444433 4589999999999999999964
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.012 Score=69.22 Aligned_cols=123 Identities=11% Similarity=0.070 Sum_probs=80.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
+|.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ...+.+.+ +-..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~------------------v~~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQ------------------INSLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCC------------------CCCCCCcH
Confidence 67899999999999999999999999999999999999985321 11111110 00011232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEecc--chHHHhhccCEEecCCCchhHHHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD--ATDAARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~--gtd~A~~aADivl~~~~~~~i~~~i~~ 639 (923)
-=....+.++ -..+.|+||..+|+.|-++|++ .|++.. +.+.....+|+++ ++++.+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 1112222222 2469999999999999999997 444532 2222234588888 567777766643
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0059 Score=70.31 Aligned_cols=70 Identities=24% Similarity=0.276 Sum_probs=50.1
Q ss_pred ecChh--hHHHHHHHHhhC----C---CEEEEEcCCccChHhhhcCC-eeeEeccchHHHhhcc--------CEEecC-C
Q 002430 568 GVFPE--HKYEIVKRLQER----K---HICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLTE-P 628 (923)
Q Consensus 568 r~sP~--~K~~iV~~lq~~----g---~~V~m~GDG~NDapaLk~Ad-VGIamg~gtd~A~~aA--------Divl~~-~ 628 (923)
.+.|. .|..-++.|.++ | ..|.++||+.||.+||+.|+ .||+|+++.+..++.+ |++..+ .
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~ 247 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATER 247 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCC
Confidence 44443 588878777654 3 47899999999999999999 6999999988887643 555443 2
Q ss_pred CchhHHHHH
Q 002430 629 GLSVIISAV 637 (923)
Q Consensus 629 ~~~~i~~~i 637 (923)
+-..|..++
T Consensus 248 ~~~GI~~al 256 (413)
T PLN02382 248 CAAGIIQAI 256 (413)
T ss_pred CccHHHHHH
Confidence 334455554
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.022 Score=68.01 Aligned_cols=48 Identities=10% Similarity=0.074 Sum_probs=39.7
Q ss_pred EEeccCCC-CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002430 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (923)
Q Consensus 486 G~i~i~D~-lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 533 (923)
|.+.-.|. .-+.+.++|++|+++|+.+++.||....-...+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 54444333 3357899999999999999999999999999999999973
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.029 Score=60.11 Aligned_cols=117 Identities=12% Similarity=0.125 Sum_probs=77.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++.|+++.++|+-....+..+-+++|+.... ..++.+.+.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46799999999999999999999999999999999999985321 1111111100 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE-eccc---hHHHhhccCEEecCC
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADA---TDAARSASDIVLTEP 628 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa-mg~g---td~A~~aADivl~~~ 628 (923)
-=....+.++-....+.|+||..+|..|=++|++-.. +..| .+.....+|+++.+.
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 3334444444444668999999999999999987533 2222 122234688888543
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.01 Score=62.85 Aligned_cols=88 Identities=20% Similarity=0.230 Sum_probs=61.1
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccC----ChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEec
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD----~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 569 (923)
+.+++.+.++.+++.|+++.++|+- ...++..+.+.+|+... . ..+.+.+.. ..-
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-f--~~i~~~d~~------------------~~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-N--PVIFAGDKP------------------GQY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-e--eEEECCCCC------------------CCC
Confidence 4455999999999999999999997 66789999999999531 1 112111110 001
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 570 sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
.| +|. ..+++.| ++.|+||..||..+-++|.+-
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 12 233 3455555 478999999999999988764
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.026 Score=59.14 Aligned_cols=112 Identities=13% Similarity=0.130 Sum_probs=71.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh-
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP- 571 (923)
++.||+.++++.|++.|+++.++|+.....+...-+..|+.. . ...+ +.+. ..+..|
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~--~-~~i~-~~~~------------------~~~~KP~ 140 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA--P-EVFV-TAER------------------VKRGKPE 140 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC--c-cEEE-EHHH------------------hcCCCCC
Confidence 478999999999999999999999988776666556667631 1 1111 1100 011123
Q ss_pred -hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee-eEeccch-HHHhhccCEEec
Q 002430 572 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLT 626 (923)
Q Consensus 572 -~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG-Iamg~gt-d~A~~aADivl~ 626 (923)
+-=....+.+.-....+.|+||..+|+.|-++|++- |++..+. ......+|+++.
T Consensus 141 p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 141 PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 222223333333346799999999999999999984 5554332 223346788764
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.057 Score=67.21 Aligned_cols=170 Identities=19% Similarity=0.189 Sum_probs=98.1
Q ss_pred HHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEecc--CCCCCccHHHHHHHHHh-CCCEEEEEccCChHHHHH
Q 002430 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPL--FDPPRHDSAETIRRALN-LGVNVKMITGDQLAIGKE 525 (923)
Q Consensus 449 ~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i--~D~lr~~~~~~I~~l~~-aGI~v~mlTGD~~~tA~~ 525 (923)
+...+.|...-.|.+++-+.. +++....- ...+.+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344455555556777776643 33332111 12366899999999999 699999999999888777
Q ss_pred HHHHhCCC---CCC---C-CCCc---ccC----------------------cccc---cc------cCcch--------H
Q 002430 526 TGRRLGMG---TNM---Y-PSSS---LLG----------------------QDKD---AS------IAALP--------V 556 (923)
Q Consensus 526 ia~~~Gi~---~~~---~-~~~~---l~~----------------------~~~~---~~------~~~~~--------~ 556 (923)
.....++. .+. . +... ... ...+ .. ..+.+ +
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 65544431 000 0 0000 000 0000 00 00011 1
Q ss_pred HHHhhh----c--Ce-----EEecCh--hhHHHHHHHHhhC--CCEEEEEcCCccChHhhhcC---CeeeEeccchHHHh
Q 002430 557 DELIEK----A--DG-----FAGVFP--EHKYEIVKRLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAAR 618 (923)
Q Consensus 557 ~~~~~~----~--~v-----far~sP--~~K~~iV~~lq~~--g~~V~m~GDG~NDapaLk~A---dVGIamg~gtd~A~ 618 (923)
.+.+.. . .+ +-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 0 11 123344 4799999888874 25799999999999999986 578888864 5
Q ss_pred hccCEEecCCCchhHHHHH
Q 002430 619 SASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 619 ~aADivl~~~~~~~i~~~i 637 (923)
.+|++.|.+. ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 6888998654 3444433
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.021 Score=59.04 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhC
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 531 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~G 531 (923)
++.+++.++|++|++.|+++.++||-.......+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999998888754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.013 Score=61.92 Aligned_cols=87 Identities=23% Similarity=0.305 Sum_probs=62.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccC----ChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD----~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
.|.+++.+.++.+++.|+++.++||- ...|+..+.+..|+....+.. .+ ++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~-vi-----------------------l~g 169 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNP-VI-----------------------FAG 169 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCccccee-EE-----------------------EcC
Confidence 36788999999999999999999994 466899999999994221111 11 111
Q ss_pred cCh--hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 569 VFP--EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 569 ~sP--~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
-++ .+|.. .+++.| .+.|+||..+|..|-++|++-
T Consensus 170 d~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 170 DKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 111 34544 344444 488999999999999999874
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.02 Score=60.01 Aligned_cols=97 Identities=16% Similarity=0.140 Sum_probs=64.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++.|+++.++|+-+...+...-+++|+.... ..++.+.+ ..+..|.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc-------------------CCCCCCC
Confidence 47899999999999999999999998887777778888874311 11111100 1112232
Q ss_pred hHHHHHHHHhhC---CCEEEEEcCCc-cChHhhhcCCe-eeEec
Q 002430 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADI-GIAVA 611 (923)
Q Consensus 573 ~K~~iV~~lq~~---g~~V~m~GDG~-NDapaLk~AdV-GIamg 611 (923)
.. -+-+.+++. ...+.|+||.. +|+.+-++|++ .|.+.
T Consensus 153 ~~-~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PK-IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HH-HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 22 223333433 35689999998 99999999987 44454
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.015 Score=57.22 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=67.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
.++|+-++.++.+++.+|.++++|+--.-....+=..++=...++......... .....-.-.++-. .-...-.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~---~ih~dg~h~i~~~---~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND---YIHIDGQHSIKYT---DDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc---eEcCCCceeeecC---CccccCC
Confidence 368999999999999999999999876555555444444111111011110000 0000000000000 0122346
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa 609 (923)
+|...|+.+++..+.+-|+|||+.|..|-+.+|+=.|
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 8999999999999999999999999988877776554
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.028 Score=62.04 Aligned_cols=108 Identities=13% Similarity=0.069 Sum_probs=75.7
Q ss_pred cCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEec
Q 002430 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 569 (923)
..+++.+++.++++.|++.|+++.++||.....+..+.+.+|+....+ ..+.+.+. ....+... .--+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~--------~~~~~~~~-~~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPP--------DMHFQREQ-GDKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcc--------hhhhcccC-CCCCC
Confidence 568899999999999999999999999999999999999998853111 11111110 00000000 01234
Q ss_pred ChhhHHHHHHHHhh-CCCEEEEEcCCccChHhhhcCCeee
Q 002430 570 FPEHKYEIVKRLQE-RKHICGMTGDGVNDAPALKKADIGI 608 (923)
Q Consensus 570 sP~~K~~iV~~lq~-~g~~V~m~GDG~NDapaLk~AdVGI 608 (923)
.|+-|....+.+-. .-..+.|+||..||+-+-+.|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 46677777766533 2367999999999999999998874
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.062 Score=54.55 Aligned_cols=127 Identities=20% Similarity=0.104 Sum_probs=69.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChH---------------HHHHHHHHhCCCCCCCCCCcccCcccccccCcchHH
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~---------------tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 557 (923)
++.||+.+++++|++.|+++.++|..... ....+-++.|+.-. ..+..... ..++
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~----~~~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHH----PEDG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCC----CCCC--
Confidence 36799999999999999999999987621 11112233444100 00000000 0000
Q ss_pred HHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE-eccchH---HHhhcc--CEEecCCCch
Q 002430 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADATD---AARSAS--DIVLTEPGLS 631 (923)
Q Consensus 558 ~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa-mg~gtd---~A~~aA--Divl~~~~~~ 631 (923)
....+-.|+--..+.+.+.-..+.+.|+||..+|+.+-++|++-.- +..|.. .....+ |+++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 0011112332234444444445679999999999999999997422 223321 112235 7776 4566
Q ss_pred hHHHHH
Q 002430 632 VIISAV 637 (923)
Q Consensus 632 ~i~~~i 637 (923)
.+...+
T Consensus 171 el~~~l 176 (181)
T PRK08942 171 DLPQAL 176 (181)
T ss_pred HHHHHH
Confidence 666554
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.09 Score=53.48 Aligned_cols=141 Identities=19% Similarity=0.222 Sum_probs=92.1
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccC------ccc----------ccccCcchHH
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG------QDK----------DASIAALPVD 557 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~------~~~----------~~~~~~~~~~ 557 (923)
+-||+.++.+.|++. ...+++|---..-+..+|..+|++........+.- .++ .+.+++++
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee-- 160 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEE-- 160 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHH--
Confidence 458999999988775 45666777777788999999998542211111100 000 01122222
Q ss_pred HHhhhc-CeEEecChhhHHHHHHHHh---------------hC---CCEEEEEcCCccChHhhhcCC--eeeEec-cchH
Q 002430 558 ELIEKA-DGFAGVFPEHKYEIVKRLQ---------------ER---KHICGMTGDGVNDAPALKKAD--IGIAVA-DATD 615 (923)
Q Consensus 558 ~~~~~~-~vfar~sP~~K~~iV~~lq---------------~~---g~~V~m~GDG~NDapaLk~Ad--VGIamg-~gtd 615 (923)
+.++. .+|.|..|..-.+|++..+ +. ....+.+||.+.|..||+.+. =|+|++ +|.+
T Consensus 161 -lfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 161 -LFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred -HHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 22222 1588888865545544444 32 334678999999999999875 247777 8888
Q ss_pred HHhhccCEEecCCCchhHHHHHH
Q 002430 616 AARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 616 ~A~~aADivl~~~~~~~i~~~i~ 638 (923)
-|..-||+.+..++.......|+
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 88889999999999888877774
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.034 Score=57.26 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=63.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++.|+++.++|+-+......+.+++|+.... ..++...+ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhh-------------------cCCCCCC
Confidence 47899999999999999999999998888888888889974311 11111100 0111232
Q ss_pred hH--HHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 573 ~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
-. ..+.+.+.-.-..+.|+||+.+|+.+-++|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 11 223333333345688999999999998888765
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.054 Score=59.39 Aligned_cols=114 Identities=18% Similarity=0.138 Sum_probs=68.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCC-CcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-SSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
++.||+.+.++.|++.|+++.++|+-.......+-+..+... .... ..+ +.+. +.+..|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v-~~~~------------------~~~~KP 203 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVF-AGDD------------------VPKKKP 203 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEE-eccc------------------cCCCCC
Confidence 578999999999999999999999988776665555443211 0000 011 1000 111122
Q ss_pred h--hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe-ccch--HHHhhccCEEec
Q 002430 572 E--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADAT--DAARSASDIVLT 626 (923)
Q Consensus 572 ~--~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam-g~gt--d~A~~aADivl~ 626 (923)
+ -=..+.+.+.-....+.|+||+.+|..|-++|++.... ..|. .-....+|+++.
T Consensus 204 ~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 204 DPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred CHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 2 22333344433345699999999999999999977554 2322 111235788873
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.027 Score=57.15 Aligned_cols=91 Identities=9% Similarity=0.038 Sum_probs=57.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|+++|+++.++|+... +...-+++|+.... ...+.+.+ ..+..|.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~-------------------~~~~kp~ 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAE-------------------IKKGKPD 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhh-------------------cCCCCCC
Confidence 5789999999999999999999997532 35566777774321 11111100 1111232
Q ss_pred hHHHHHHHHhhC---CCEEEEEcCCccChHhhhcCCee
Q 002430 573 HKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 573 ~K~~iV~~lq~~---g~~V~m~GDG~NDapaLk~AdVG 607 (923)
..-+-+.+++. ...+.|+||..+|+.+-++|++-
T Consensus 144 -p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 144 -PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred -hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 22222333333 34588999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.065 Score=51.24 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=61.2
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCC--------hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhc
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~--------~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 563 (923)
-++.|++.++++.|+++|+++.++|+.. ......+.+++|+.... ....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~--~---------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP--H---------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC--C----------------
Confidence 3678999999999999999999999988 66777788888874210 00000 0
Q ss_pred CeEEecChhhHHHHHHHHh-hCCCEEEEEcC-CccChHhhhcCCe
Q 002430 564 DGFAGVFPEHKYEIVKRLQ-ERKHICGMTGD-GVNDAPALKKADI 606 (923)
Q Consensus 564 ~vfar~sP~~K~~iV~~lq-~~g~~V~m~GD-G~NDapaLk~AdV 606 (923)
+.+-.|+-=..+.+.++ -....+.|+|| -.+|..+-++|++
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 00111221123344442 33466999999 5899999988865
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.018 Score=57.22 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=66.1
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
.++.|++.+.++.|++.|++++++|+-.........+++|+..- ....+...+.. ...-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~-----------------~~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG-----------------SRKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS-----------------SSTTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh-----------------hhhhHH
Confidence 35789999999999999999999999999999999999998521 11121111100 000011
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
+-=..+.+.+.-....+.|+||..+|..+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 111334444444456699999999999999988764
|
... |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.06 Score=56.38 Aligned_cols=119 Identities=12% Similarity=0.087 Sum_probs=73.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|++. +++.++|+-....+..+-+++|+..-. ..++...+ .....|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~-------------------~~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSED-------------------AGIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCc-------------------cCCCCCC
Confidence 5789999999999999 999999998888888888888885321 11111100 0011232
Q ss_pred hH--HHHHHHH-hhCCCEEEEEcCCc-cChHhhhcCCe-eeEec--cchHHHhhccCEEecCCCchhHHH
Q 002430 573 HK--YEIVKRL-QERKHICGMTGDGV-NDAPALKKADI-GIAVA--DATDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 573 ~K--~~iV~~l-q~~g~~V~m~GDG~-NDapaLk~AdV-GIamg--~gtd~A~~aADivl~~~~~~~i~~ 635 (923)
.. ....+.+ .-....+.|+||.. +|+.+=+++++ +|.+. ..+......+|.++ ++++.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 21 2333333 22234589999998 89999999997 33443 22212223466666 44555443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.11 Score=58.66 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=77.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||..-. ..++ +.+. +.+-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv-~sdd------------------v~~~KP~ 274 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIV-AAED------------------VYRGKPD 274 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEE-ecCc------------------CCCCCCC
Confidence 46799999999999999999999999999999999999985321 1111 1110 0111222
Q ss_pred --hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe-ccchHHH-hhccCEEecCCCchhH
Q 002430 573 --HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADATDAA-RSASDIVLTEPGLSVI 633 (923)
Q Consensus 573 --~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam-g~gtd~A-~~aADivl~~~~~~~i 633 (923)
-=....+.+.-....+.|+||..+|+.|-+.|++-... ..+.+.. ...||+++ +++..+
T Consensus 275 Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 275 PEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 22334444444456799999999999999999985433 3332222 23588887 445444
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.075 Score=53.58 Aligned_cols=94 Identities=16% Similarity=0.168 Sum_probs=60.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ..++.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988776 5555557874311 111111000 00111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV 606 (923)
-=..+.+.+.-....+.|+||...|+.+-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 2233344443345678999999999998888876
|
HAD subfamilies caused by an overly broad single model. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.075 Score=53.61 Aligned_cols=99 Identities=9% Similarity=-0.029 Sum_probs=57.4
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChH--------HHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCe
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG 565 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~--------tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 565 (923)
+.||+.+++++|++.|+++.++|+.... .....-+..|+..-. .. .....+.. -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~-~~~~~~~~----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIY-LC-PHKHGDGC----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEE-EC-cCCCCCCC----------------C
Confidence 6799999999999999999999987531 122223344542110 00 00000000 0
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 566 far~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
..+-.|+-=..+.+.+.-.-+-+.|+||..+|+.|=++|++-...
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 111122222344444433345699999999999999999886543
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.063 Score=56.61 Aligned_cols=99 Identities=11% Similarity=0.024 Sum_probs=64.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|++.|+++.++|+-+...+...-+..|+.... ..++.+.+ +.+-.|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeee-------------------CCCCCCC
Confidence 57899999999999999999999998888877777778874311 11111100 1111221
Q ss_pred --hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee--eEecc
Q 002430 573 --HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAVAD 612 (923)
Q Consensus 573 --~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG--Iamg~ 612 (923)
-=....+.+.-....+.|+||..+|+.+-++|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 11122222322345699999999999999999995 45543
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.091 Score=52.90 Aligned_cols=109 Identities=6% Similarity=-0.050 Sum_probs=68.3
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccC-ChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcC
Q 002430 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKAD 564 (923)
Q Consensus 486 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD-~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 564 (923)
....-+-++.||+.++++.|+++|+++.++|+- ....+..+-..+|+.... . -..+..... ..
T Consensus 38 ~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~---~------------~~~~~~~Fd-~i 101 (174)
T TIGR01685 38 DKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAG---K------------TVPMHSLFD-DR 101 (174)
T ss_pred eCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCC---C------------cccHHHhce-ee
Confidence 333444567899999999999999999999965 888888888888874100 0 000001110 00
Q ss_pred eEEecChhhH--HHHHHHHhhC------CCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 565 GFAGVFPEHK--YEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 565 vfar~sP~~K--~~iV~~lq~~------g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
+.+.-.+..| ..+.+.+.+. -..+.|+||...|+.|-++|.+-...
T Consensus 102 v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 102 IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 1111111112 2344544432 25699999999999999988876554
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.055 Score=54.81 Aligned_cols=92 Identities=13% Similarity=0.133 Sum_probs=58.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++.|+++.++|+- ..+..+-+++|+..-. ..++ +.+. ..+..|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~-~~~~------------------~~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIV-DADE------------------VKEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEee-ehhh------------------CCCCCCC
Confidence 68899999999999999999999986 5566777778874211 1111 1100 0112232
Q ss_pred hH--HHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 573 ~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
.. ..+.+.+.-....+.|+||..+|+.+-++|++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 21 122222222235588999999999999998774
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.31 Score=47.73 Aligned_cols=109 Identities=15% Similarity=0.160 Sum_probs=75.6
Q ss_pred HHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHh
Q 002430 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (923)
Q Consensus 451 ~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~ 530 (923)
..+.+..+|.|.+.+-..+ +++..= ....-|++.+=+++++.+|+++.++|.-++.-+...+..+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 3567888999998775543 333321 1235578888899999999999999999999999999999
Q ss_pred CCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe-cChhhHHHHHHHHhhC---CCEEEEEcCCc-cChHhhhcCC
Q 002430 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFPEHKYEIVKRLQER---KHICGMTGDGV-NDAPALKKAD 605 (923)
Q Consensus 531 Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar-~sP~~K~~iV~~lq~~---g~~V~m~GDG~-NDapaLk~Ad 605 (923)
|+.- ..| ..|-- ..+-+++++. -+-|+|+||-. .|+-+=+.|+
T Consensus 84 ~v~f-------------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 84 GVPF-------------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred CCce-------------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 9842 111 12222 2455666665 45799999985 5766655554
Q ss_pred e
Q 002430 606 I 606 (923)
Q Consensus 606 V 606 (923)
+
T Consensus 132 ~ 132 (175)
T COG2179 132 M 132 (175)
T ss_pred c
Confidence 3
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.1 Score=59.58 Aligned_cols=112 Identities=20% Similarity=0.181 Sum_probs=69.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHH-HhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~-~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
++.||+.+.++.|++.|+++.++|+-....+...-. ..|+.... ..++ +.+. +.+..|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii-~~d~------------------v~~~KP 151 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIV-GGDE------------------VEKGKP 151 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEE-ehhh------------------cCCCCC
Confidence 467999999999999999999999998877766554 56763211 0111 1000 111123
Q ss_pred --hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE-eccc--hHHHhhccCEEe
Q 002430 572 --EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADA--TDAARSASDIVL 625 (923)
Q Consensus 572 --~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa-mg~g--td~A~~aADivl 625 (923)
+-=..+.+.+.-..+.|.|+||..+|+.|-++|++-.. +..+ .......+|.++
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 21123333333334669999999999999999998743 3332 222333566665
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.034 Score=59.56 Aligned_cols=58 Identities=26% Similarity=0.373 Sum_probs=48.2
Q ss_pred ecCh--hhHHHHHHHHhhCCCEEEEEcC----CccChHhhhcC-CeeeEeccchHHHhhccCEEe
Q 002430 568 GVFP--EHKYEIVKRLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 625 (923)
Q Consensus 568 r~sP--~~K~~iV~~lq~~g~~V~m~GD----G~NDapaLk~A-dVGIamg~gtd~A~~aADivl 625 (923)
.+.| -+|..-++.|.+...-|+++|| |-||.+||+.| -.|++++++++..+..+.+++
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4444 4799999999887778999999 99999999987 788999899999987776543
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.25 Score=48.99 Aligned_cols=102 Identities=15% Similarity=0.190 Sum_probs=65.2
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHH---HHHHHh---C--CCCCCCCCCcccCcccccccCcchHHHHhhh
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~---~ia~~~---G--i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 562 (923)
+|.+.|+++++++++++.|+++..+||.....+. ....++ | ++. ...+. .. +..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~-~~------g~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLL-SP------DRLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEE-cC------Ccchhh-hhc
Confidence 4678899999999999999999999999987764 334442 2 321 01110 00 000000 000
Q ss_pred cCeEEecChh-hHHHHHHHHhh-----CCCEEEEEcCCccChHhhhcCCe
Q 002430 563 ADGFAGVFPE-HKYEIVKRLQE-----RKHICGMTGDGVNDAPALKKADI 606 (923)
Q Consensus 563 ~~vfar~sP~-~K~~iV~~lq~-----~g~~V~m~GDG~NDapaLk~AdV 606 (923)
.+. .-.|+ .|...++.+++ ....++..||+.+|+.+-++++|
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 111 22343 48888887776 35778889999999999987755
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.13 Score=53.92 Aligned_cols=120 Identities=15% Similarity=0.123 Sum_probs=73.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|+ .|+++.++|......+...-++.|+..-. ..++.+.+ .....|.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~-------------------~~~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQ-------------------VGVAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECc-------------------cCCCCCC
Confidence 46899999999999 68999999998888877777778874211 01111000 0011232
Q ss_pred hHHHHHHHHhhCC----CEEEEEcCCc-cChHhhhcCCee-eEec-cchH-HHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERK----HICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g----~~V~m~GDG~-NDapaLk~AdVG-Iamg-~gtd-~A~~aADivl~~~~~~~i~~~i 637 (923)
..-+-..+++.| ..+.|+||.. +|+.+=++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 153 -p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 153 -VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred -HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 122223333332 4699999998 799999999985 4443 2221 1112467877 4566665543
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.45 E-value=0.16 Score=51.14 Aligned_cols=85 Identities=13% Similarity=0.114 Sum_probs=59.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCC-hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecC
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~-~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~s 570 (923)
..+-|++.++++.|++.|+++.++|+-+ ...+..+.+.+|+... +....
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~------------------------------~~~~K 91 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL------------------------------PHAVK 91 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE------------------------------cCCCC
Confidence 3578999999999999999999999987 5667777777776310 00012
Q ss_pred hhhHHHHHHHHhh---CCCEEEEEcCCc-cChHhhhcCCee
Q 002430 571 PEHKYEIVKRLQE---RKHICGMTGDGV-NDAPALKKADIG 607 (923)
Q Consensus 571 P~~K~~iV~~lq~---~g~~V~m~GDG~-NDapaLk~AdVG 607 (923)
|... .+-..+++ ....+.|+||.. .|..+=++|++-
T Consensus 92 P~p~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 92 PPGC-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred CChH-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 2211 22223333 234599999998 799999999874
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.14 Score=50.16 Aligned_cols=97 Identities=19% Similarity=0.141 Sum_probs=57.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCCh---------------HHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHH
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~---------------~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 557 (923)
++.||+.++++.|++.|+++.++|..+. .....+.+++|+.....-.. ..+....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC-PHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC-CCCCCCC---------
Confidence 4789999999999999999999998652 34455667777742100000 0000000
Q ss_pred HHhhhcCeEEecChhhH--HHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 558 ELIEKADGFAGVFPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 558 ~~~~~~~vfar~sP~~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
...+ .|+-+ ..+.+.+.-..+-+.|+||...|..+-+.|++-
T Consensus 97 -------~~~~-KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 -------CSCR-KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -------CCCC-CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 0000 23211 122222222235699999999999988888764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.35 Score=48.87 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=23.9
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCC
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQ 519 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~ 519 (923)
+.|++.++++.|+++|+++.++|.-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999999999999999765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.26 Score=52.04 Aligned_cols=103 Identities=21% Similarity=0.280 Sum_probs=67.5
Q ss_pred CCCccHHHHHHHH--HhCCCEEEEEccCChHHHHHHHHHhCCCCC---CCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002430 493 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTN---MYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 493 ~lr~~~~~~I~~l--~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
|+.|+.++.++.+ ++.|+.+.++|.=|..--..+=+.-|+... ++........ ...+ .+... ..+-|.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~--~G~l---~v~py--h~h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDA--DGRL---RVRPY--HSHGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecC--CceE---EEeCc--cCCCCC
Confidence 5678999999999 568999999999998888888888887532 1111110000 0000 00000 012355
Q ss_pred ecCh-hhHHHHHHHHhhC----C---CEEEEEcCCccCh-Hhhh
Q 002430 568 GVFP-EHKYEIVKRLQER----K---HICGMTGDGVNDA-PALK 602 (923)
Q Consensus 568 r~sP-~~K~~iV~~lq~~----g---~~V~m~GDG~NDa-paLk 602 (923)
++.| .=|..+++.+++. | ..|.++|||.||- |+++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 6655 4799999988875 4 6899999999996 5543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.11 Score=50.91 Aligned_cols=88 Identities=23% Similarity=0.339 Sum_probs=55.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhh
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 573 (923)
..+|+.+.++.|++.|+++.++|+-....+...-+.. +... . . .+.+.+. +. ..|.
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~-~i~~~~~------------------~~-~Kp~- 120 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-D-LILGSDE------------------FG-AKPE- 120 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-c-EEEecCC------------------CC-CCcC-
Confidence 4579999999999999999999999888887777664 3221 1 0 1111100 01 1221
Q ss_pred HHHHHHHHhhCCC--EEEEEcCCccChHhhhcCC
Q 002430 574 KYEIVKRLQERKH--ICGMTGDGVNDAPALKKAD 605 (923)
Q Consensus 574 K~~iV~~lq~~g~--~V~m~GDG~NDapaLk~Ad 605 (923)
..-+.+.+++.|. .+.|+||..+|..|-++|+
T Consensus 121 ~~~~~~~~~~~~~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 121 PEIFLAALESLGLPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHcc
Confidence 1222222333221 6899999999998877763
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=92.80 E-value=0.5 Score=50.94 Aligned_cols=87 Identities=14% Similarity=0.086 Sum_probs=58.6
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHH---HHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t---A~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
..++-|++.+.++.+++.|+++.++|+-.... +...-++.|+.... .+ .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~--~d-----------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD--EE-----------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC--cc-----------------------eEEe
Confidence 35577999999999999999999999976433 33445667775311 01 1222
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhh
Q 002430 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602 (923)
Q Consensus 568 r~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk 602 (923)
|-....|..-.+.+.+.-.+++++||-.+|.....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 22223455566666666678999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=92.75 E-value=0.22 Score=51.37 Aligned_cols=91 Identities=13% Similarity=0.101 Sum_probs=56.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++-||+.++++.|++.|+++.++|+-... ....-+++|+.... ..++...+ +....|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~-------------------~~~~KP~ 162 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYE-------------------VGAEKPD 162 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeecc-------------------cCCCCCC
Confidence 57799999999999999999999975543 45666777763211 01110000 0001222
Q ss_pred hHHHHHHHHhhC---CCEEEEEcCCc-cChHhhhcCCe
Q 002430 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADI 606 (923)
Q Consensus 573 ~K~~iV~~lq~~---g~~V~m~GDG~-NDapaLk~AdV 606 (923)
..-+-+.+++. ...+.|+||.. +|+.+=++|++
T Consensus 163 -~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 163 -PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred -HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 12223333333 35689999997 89988888765
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=92.70 E-value=1.1 Score=47.62 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=59.2
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHH--HHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhc
Q 002430 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (923)
Q Consensus 486 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~--~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 563 (923)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. ...+++|+..+.. ..++... .
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~~Ii~s~---------~-------- 78 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-EMIISSG---------E-------- 78 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-ceEEccH---------H--------
Confidence 556666788999999999999999999999995544333 4557778753110 1111100 0
Q ss_pred CeEEecChhhHHHHHHHHhh---CCCEEEEEcCCccChHhhhcCC
Q 002430 564 DGFAGVFPEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKAD 605 (923)
Q Consensus 564 ~vfar~sP~~K~~iV~~lq~---~g~~V~m~GDG~NDapaLk~Ad 605 (923)
....-+.+.+++ .+..+.|+||+.+|...+..++
T Consensus 79 --------~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 79 --------IAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred --------HHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 001122222233 2466999999999998886543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.88 E-value=0.27 Score=52.60 Aligned_cols=66 Identities=21% Similarity=0.204 Sum_probs=46.8
Q ss_pred ecChhhHHHHHHHHhhC----CCEEEEEcCCccChHhhhcC--------CeeeEeccchHHHhhccCEEecCCCchhHHH
Q 002430 568 GVFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 568 r~sP~~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~A--------dVGIamg~gtd~A~~aADivl~~~~~~~i~~ 635 (923)
+-.+.+|...++.+.++ ...++|+||+.||.+|++.+ ..||+|+.|. .+..|++++. +...+..
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~ 237 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLE 237 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHH
Confidence 33456788877776553 34689999999999999998 4788885443 3567899884 4555544
Q ss_pred HH
Q 002430 636 AV 637 (923)
Q Consensus 636 ~i 637 (923)
.+
T Consensus 238 ~L 239 (244)
T TIGR00685 238 FL 239 (244)
T ss_pred HH
Confidence 44
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.85 E-value=0.4 Score=53.83 Aligned_cols=97 Identities=12% Similarity=0.057 Sum_probs=56.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccC---------------ChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchH
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV 556 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD---------------~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~ 556 (923)
-+|.|++.++++.|++.|+++.++|+= ....+..+.+..|+.-+ ..+.+... ..+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~~----~sd-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPHF----PED-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCCc----Ccc--
Confidence 367899999999999999999999982 12334555666665310 01000000 000
Q ss_pred HHHhhhcCeEEecChhhHHHHHHHH-hh---CCCEEEEEcCCccChHhhhcCCeee
Q 002430 557 DELIEKADGFAGVFPEHKYEIVKRL-QE---RKHICGMTGDGVNDAPALKKADIGI 608 (923)
Q Consensus 557 ~~~~~~~~vfar~sP~~K~~iV~~l-q~---~g~~V~m~GDG~NDapaLk~AdVGI 608 (923)
+..+| .|+ -.++..+ ++ ....+.|+||+.+|..+-+.|++-.
T Consensus 99 -------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 -------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred -------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 00111 232 2233222 22 2367999999999999988887753
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=91.81 E-value=0.23 Score=49.40 Aligned_cols=98 Identities=13% Similarity=0.078 Sum_probs=57.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCC---------------hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHH
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~---------------~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 557 (923)
++-|++.+++++|++.|+++.++|.-. ......+-+++|+.- . ..+.+.... .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---D-DVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---e-EEEECCCCC----CC---
Confidence 456899999999999999999999742 334555666677631 0 011000000 00
Q ss_pred HHhhhcCeEEecChhhHHHHHHH-HhhC---CCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 558 ELIEKADGFAGVFPEHKYEIVKR-LQER---KHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 558 ~~~~~~~vfar~sP~~K~~iV~~-lq~~---g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
+ +....|. ..+++. +++. ...+.|+||+.+|..+-++|++-...
T Consensus 98 ------~-~~~~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 ------N-CDCRKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ------C-CCCCCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0 0001232 222222 2222 24589999999999999998876543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=91.62 E-value=0.25 Score=48.46 Aligned_cols=93 Identities=17% Similarity=0.011 Sum_probs=63.6
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
-++||++.+.++.|+ .++++.+.|.=....+..+-+.+|+.... ...++ +.+. +.+..|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-f~~i~-~~~d------------------~~~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-GYRRL-FRDE------------------CVFVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-eeeEE-ECcc------------------ccccCC
Confidence 357999999999999 57999999999999999999998874311 11111 1111 111123
Q ss_pred hhHHHHHHHHhh---CCCEEEEEcCCccChHhhhcCCeeeE
Q 002430 572 EHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIGIA 609 (923)
Q Consensus 572 ~~K~~iV~~lq~---~g~~V~m~GDG~NDapaLk~AdVGIa 609 (923)
. +.+.+++ ....|.|+||..+|..|-++|.|-|.
T Consensus 103 ~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 103 K----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred e----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 2 4444443 34679999999999998877755543
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.3 Score=52.33 Aligned_cols=45 Identities=29% Similarity=0.347 Sum_probs=35.5
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHH
Q 002430 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDA 616 (923)
Q Consensus 572 ~~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~ 616 (923)
..|..-|+.|+++ + +.|..+||..||.+||..++-||.++++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 4798999988875 2 3466789999999999999999999977665
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=90.91 E-value=0.41 Score=50.17 Aligned_cols=98 Identities=14% Similarity=0.125 Sum_probs=56.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHH-HHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~-ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
++.||+.+.|+.|++.|+++.++||-+...... ..+..|+.. .. ...+.+.+.+ +.+..|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~f-~~i~~~~~~~-----------------~~~~KP 138 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-LM-HHVVTGDDPE-----------------VKQGKP 138 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-hC-CEEEECChhh-----------------ccCCCC
Confidence 467999999999999999999999977543322 222223321 00 0011100000 011112
Q ss_pred h--hHHHHHHHHh---hCCCEEEEEcCCccChHhhhcCCeeeE
Q 002430 572 E--HKYEIVKRLQ---ERKHICGMTGDGVNDAPALKKADIGIA 609 (923)
Q Consensus 572 ~--~K~~iV~~lq---~~g~~V~m~GDG~NDapaLk~AdVGIa 609 (923)
+ -=...++.+. -...-+.|+||...|+.|-++|++-..
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 2 1123333332 223569999999999999999998543
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=89.94 E-value=0.55 Score=49.28 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=62.2
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhC---CCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~G---i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
+-++.||+.+++++|+++|+++.++|..+....+.+-+..+ +..- + +.... ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f--------------~~~fd-~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------F--------------SGYFD-TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------c--------------ceEEE-eCccc
Confidence 35689999999999999999999999988776666554442 2110 0 00000 00111
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 568 r~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
.-.|+-=..+.+.+.-...-++|+||...|+.|-++|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1112211334444433345689999999999999999986544
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=89.85 E-value=1.4 Score=57.19 Aligned_cols=124 Identities=15% Similarity=0.180 Sum_probs=78.6
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhh
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 573 (923)
+-||+.+.++.|+++|+++.++|+-....+..+-++.|+...... ..+...+ +.+..|+.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~-------------------~~~~KP~P 221 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADA-------------------FENLKPAP 221 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECcc-------------------cccCCCCH
Confidence 579999999999999999999999988888888888888421111 1111100 11222322
Q ss_pred H--HHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEeccc---hHHHhhccCEEecCCCchhHHHHH
Q 002430 574 K--YEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADA---TDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 574 K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~g---td~A~~aADivl~~~~~~~i~~~i 637 (923)
. ....+.+.-...-+.|+||..+|+.|-++|++ -|++..+ .+.....+|+++.+..--++...+
T Consensus 222 e~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~ 291 (1057)
T PLN02919 222 DIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDIL 291 (1057)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHH
Confidence 1 23334443334668999999999999999988 3444322 333445788888544322333433
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.67 E-value=1.7 Score=44.53 Aligned_cols=112 Identities=16% Similarity=0.215 Sum_probs=67.1
Q ss_pred CCCccHHHHHHHHHhCCC-EEEEEccCChHHHHHHHHHhCCCC---CCCCCC-cccCcccccccCcchHHHHhhhcCeEE
Q 002430 493 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGT---NMYPSS-SLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI-~v~mlTGD~~~tA~~ia~~~Gi~~---~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
|.-|+..++|+.+++.|- .++++|--|.---..+-+..|+.+ .+++.. .+... ..+.-.... .-+-|.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~---G~L~v~pyH----~~hsC~ 156 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDAS---GRLLVRPYH----TQHSCN 156 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCC---CcEEeecCC----CCCccC
Confidence 567899999999999997 999999988776667777777631 000000 00000 000000000 011244
Q ss_pred ecChh-hHHHHHHHHhhCC-------CEEEEEcCCccCh-HhhhcCCeeeEec
Q 002430 568 GVFPE-HKYEIVKRLQERK-------HICGMTGDGVNDA-PALKKADIGIAVA 611 (923)
Q Consensus 568 r~sP~-~K~~iV~~lq~~g-------~~V~m~GDG~NDa-paLk~AdVGIamg 611 (923)
++-|. =|..++..++..+ ..+.++|||.||. |.++...--+||-
T Consensus 157 ~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 157 LCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred cCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 54332 4777777766432 2788999999994 8877766666663
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=89.34 E-value=1.1 Score=42.62 Aligned_cols=39 Identities=5% Similarity=0.034 Sum_probs=34.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccC-ChHHHHHHHHHhC
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLG 531 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD-~~~tA~~ia~~~G 531 (923)
++.+|+.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777666666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=88.98 E-value=1.9 Score=45.25 Aligned_cols=87 Identities=20% Similarity=0.253 Sum_probs=53.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHH---HHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET---GRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~i---a~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
-|+-|++.+.++.+++.|++|+++||........+ =++.|...- ..+.-+..+ +. ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~----~~LiLR~~~----d~------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW----KHLILRGLE----DS------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc----CeeeecCCC----CC------------Cc
Confidence 47789999999999999999999999986542222 234565420 111111000 00 00
Q ss_pred cChhhHHHHHHHHhhCC-CEEEEEcCCccCh
Q 002430 569 VFPEHKYEIVKRLQERK-HICGMTGDGVNDA 598 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g-~~V~m~GDG~NDa 598 (923)
..-+-|.+.=+.+.+.| .+++.+||-.+|-
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 01122667666777666 4678899998885
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=88.76 E-value=2.2 Score=53.78 Aligned_cols=67 Identities=7% Similarity=0.063 Sum_probs=44.6
Q ss_pred HHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHH-HhCCCEEEEEccCChHHHHHHHH
Q 002430 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETGR 528 (923)
Q Consensus 450 ~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l-~~aGI~v~mlTGD~~~tA~~ia~ 528 (923)
..++.|.....|.+++-|.. +|+-.....-.|-+++.+++++| ++.|+.|.++||.+..+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 34455555566777665543 33322212235667899999997 77899999999999988776654
Q ss_pred H
Q 002430 529 R 529 (923)
Q Consensus 529 ~ 529 (923)
.
T Consensus 653 ~ 653 (854)
T PLN02205 653 P 653 (854)
T ss_pred C
Confidence 3
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=88.73 E-value=0.41 Score=49.73 Aligned_cols=95 Identities=13% Similarity=0.018 Sum_probs=54.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHH--HHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEec
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t--A~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 569 (923)
-++.|++.+.++.|++.|+++.++|...... ........|+.... + .++ +... ....
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-d-~v~-~s~~------------------~~~~ 151 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-D-AVV-ESCL------------------EGLR 151 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-C-EEE-Eeee------------------cCCC
Confidence 3578999999999999999999999865432 22222223332110 0 000 0000 0001
Q ss_pred ChhhH--HHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 570 FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 570 sP~~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
.|+-. ..+.+.+.-....++|+||...|+.+=++|++-
T Consensus 152 KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 152 KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 23221 222333332335588999999999999999874
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=88.28 E-value=1.2 Score=44.50 Aligned_cols=40 Identities=8% Similarity=-0.006 Sum_probs=31.2
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChH------------HHHHHHHHhCCC
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMG 533 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~------------tA~~ia~~~Gi~ 533 (923)
+-||+.++++.|+++|+++.++|.-... ....+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 3489999999999999999999975431 345566777763
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=87.45 E-value=1.9 Score=43.10 Aligned_cols=102 Identities=18% Similarity=0.197 Sum_probs=71.6
Q ss_pred HHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC--EEEEEccC-------ChHHHHH
Q 002430 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV--NVKMITGD-------QLAIGKE 525 (923)
Q Consensus 455 ~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI--~v~mlTGD-------~~~tA~~ 525 (923)
+...|.|.+.+-... ++ ...=++.+-|+..+.+++|++.+. +|.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 667888888775433 11 113457788999999999999987 49999986 3678999
Q ss_pred HHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhC-----CCEEEEEcCCc-cChH
Q 002430 526 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGV-NDAP 599 (923)
Q Consensus 526 ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~-----g~~V~m~GDG~-NDap 599 (923)
+.+.+|+.. + .+..-.|.-..++.+.++.+ -+-++|+||-. -|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999741 0 12234676667788888755 45699999963 3443
Q ss_pred h
Q 002430 600 A 600 (923)
Q Consensus 600 a 600 (923)
+
T Consensus 152 ~ 152 (168)
T PF09419_consen 152 M 152 (168)
T ss_pred H
Confidence 3
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=86.67 E-value=1.2 Score=50.34 Aligned_cols=67 Identities=25% Similarity=0.232 Sum_probs=46.9
Q ss_pred EecChh---hHHHHHHHHhhC-C-----C-EEEEEcCCccChHhhhc-----CCeeeEeccchHHHhhccCEEecCCCch
Q 002430 567 AGVFPE---HKYEIVKRLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLS 631 (923)
Q Consensus 567 ar~sP~---~K~~iV~~lq~~-g-----~-~V~m~GDG~NDapaLk~-----AdVGIamg~gtd~A~~aADivl~~~~~~ 631 (923)
-.+.|. +|..-|+.+-+. | . .+.++||+.||-.|++. +++||+|++|.+ ...|++.|.+ -.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~--~t~A~y~L~d--p~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK--ESNAFYSLRD--PS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC--CccceEEcCC--HH
Confidence 455553 898888877654 2 1 35899999999999995 689999987654 2367888854 34
Q ss_pred hHHHHH
Q 002430 632 VIISAV 637 (923)
Q Consensus 632 ~i~~~i 637 (923)
.+...+
T Consensus 368 eV~~~L 373 (384)
T PLN02580 368 EVMEFL 373 (384)
T ss_pred HHHHHH
Confidence 444444
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=86.44 E-value=13 Score=42.05 Aligned_cols=44 Identities=11% Similarity=0.004 Sum_probs=33.8
Q ss_pred eEEEEeccCC--CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH
Q 002430 483 QLVGLLPLFD--PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 527 (923)
Q Consensus 483 ~llG~i~i~D--~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia 527 (923)
+|+-++.-.| .+-++..++|++|. .|+.+.++||..........
T Consensus 121 TL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 121 TLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 4444443333 36789999999999 78999999999998888773
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.43 E-value=1.7 Score=44.62 Aligned_cols=95 Identities=12% Similarity=0.047 Sum_probs=54.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH-HHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia-~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
++.|++.++++.|++.|+++.++|.-+.......- +..++.... ..++...+ +....|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f--d~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA--DHIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc--CEEEEecc-------------------cCCCCC
Confidence 47899999999999999999999987655433221 112321100 00000000 001122
Q ss_pred hhH--HHHHHHHhhCCCEEEEEcCCccChHhhhcCCeee
Q 002430 572 EHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (923)
Q Consensus 572 ~~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGI 608 (923)
.-. ..+.+.+.-...-+.|+||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 111 2233333333456899999999999999888853
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.98 E-value=1.5 Score=45.77 Aligned_cols=97 Identities=12% Similarity=0.130 Sum_probs=59.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.| ++++.++|+.....+...=++.|+.... +...+.+.+.. ..+-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 4999999999887777776777775321 11111111000 0001111
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
-=....+.+.-...-|+|+||..+|..+=++|++-...
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 11222223322234589999999999999999987653
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=83.69 E-value=1.9 Score=44.10 Aligned_cols=93 Identities=12% Similarity=0.125 Sum_probs=53.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+|+..-. +. .. + ..+.++..+.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-~~-~f--------------~-----~i~~~~~~~~ 131 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-PG-AF--------------S-----EVLMCGHDES 131 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-CC-cc--------------c-----EEEEeccCcc
Confidence 36899999999999985 56667764444433344556653110 00 00 0 0011111111
Q ss_pred hHHHHHH-HHhhCC-CEEEEEcCCccChHhhhcC--Ceee
Q 002430 573 HKYEIVK-RLQERK-HICGMTGDGVNDAPALKKA--DIGI 608 (923)
Q Consensus 573 ~K~~iV~-~lq~~g-~~V~m~GDG~NDapaLk~A--dVGI 608 (923)
|-+++. ++++.| ..++|+||..+|+.|-++| ++-.
T Consensus 132 -kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 132 -KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred -cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 223332 333334 4578999999999999999 8854
|
2 hypothetical protein; Provisional |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.40 E-value=7.5 Score=40.03 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=31.4
Q ss_pred cHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002430 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (923)
Q Consensus 497 ~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 533 (923)
.+.+.+.+|+++|++|+..|--...--...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999988777667777788875
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=83.30 E-value=2.5 Score=46.97 Aligned_cols=47 Identities=19% Similarity=0.258 Sum_probs=38.9
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH---HHhCC
Q 002430 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGM 532 (923)
Q Consensus 486 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia---~~~Gi 532 (923)
|.+--.+.+=|++.++|++|++.|++++++|+....+...++ +++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 555555677799999999999999999999999977777777 45665
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=81.86 E-value=1.2 Score=40.43 Aligned_cols=48 Identities=21% Similarity=0.278 Sum_probs=36.1
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH---HHhCCC
Q 002430 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (923)
Q Consensus 486 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia---~~~Gi~ 533 (923)
|++.-.+.+=|++.++|+.|+++|++++.+|.....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 555667788899999999999999999999998866655555 456664
|
... |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=81.26 E-value=3 Score=46.47 Aligned_cols=91 Identities=11% Similarity=0.069 Sum_probs=65.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH----hCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~----~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
++.+++.++++.|++.|+++.++|.-+...|..+-++ +|+.... .+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 4578999999999999999999999999999888877 6653210 0111
Q ss_pred cChhhHHHHHHHH-hh---CCCEEEEEcCCccChHhhhcCCeeeEec
Q 002430 569 VFPEHKYEIVKRL-QE---RKHICGMTGDGVNDAPALKKADIGIAVA 611 (923)
Q Consensus 569 ~sP~~K~~iV~~l-q~---~g~~V~m~GDG~NDapaLk~AdVGIamg 611 (923)
..+.-|...++.+ ++ .-.-++|+||...|..+.+++..++.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 2233344444333 22 2367899999999999999998887553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 923 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-117 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 3e-39 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-38 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 9e-38 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 7e-37 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-23 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-23 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-23 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-23 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 3e-19 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 3e-19 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 5e-11 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-05 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 5e-08 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 5e-08 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 5e-06 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 1e-05 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 2e-04 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 4e-04 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 923 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-142 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-140 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-130 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 4e-45 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-44 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 6e-30 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 3e-29 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 6e-29 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 5e-25 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 8e-18 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-16 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 2e-15 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 7e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 4e-06 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 1e-05 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 1e-05 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 1e-05 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 2e-05 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 2e-05 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 2e-05 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 3e-05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 3e-05 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 4e-05 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 6e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 2e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 3e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 3e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 5e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 1258 bits (3258), Expect = 0.0
Identities = 760/881 (86%), Positives = 811/881 (92%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFL 67
SLE+IKNE+VDLE+IPIEEVF+QLKCSREGLT+ EG R+ +FGPNKLEEKKESK+LKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 68 GFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAA 127
GFMWNPLSWVME AAIMAIALANG GR PDWQDFVGII LLVINSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 128 ALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
ALMA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSIA+G+V EII+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L A
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
A ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID GNWHR S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQIL L D+ KKV ++IDK+AERGLRSL VARQ +PEKTKESPGAPW+ VGL
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607
DA++A++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 608 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
IAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFML
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML 662
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
IALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y AI
Sbjct: 663 IALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 787
MTV+FFW KTDFFSD FGVRS+R E+M A+YLQVSIISQALIFVTRSRSWSF+ER
Sbjct: 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVER 782
Query: 788 PGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847
PG LL AF+IAQL+AT IAVYANW FA+I G GWGWAGVIWLYS+VTYFPLD+ KF IR
Sbjct: 783 PGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIR 842
Query: 848 YILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLH 888
YILSGKAW L ENKTAFT KKDYGKEEREAQW H
Sbjct: 843 YILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRGSHHHH 883
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 1103 bits (2855), Expect = 0.0
Identities = 305/892 (34%), Positives = 481/892 (53%), Gaps = 45/892 (5%)
Query: 4 DKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKV 63
D + EE + + R+ E++ + +R GLTS+E R +G N+++E+KE+
Sbjct: 56 DGHDAEEEEEEATPGGGRVVPEDMLQ--TDTRVGLTSEEVVQRRRKYGLNQMKEEKENHF 113
Query: 64 LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123
LKFLGF P+ +VME AA++A L DW DF I LL++N+ + F++E AG
Sbjct: 114 LKFLGFFVGPIQFVMEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQEFQAG 166
Query: 124 NAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP-LKID 182
+ L LA K VLRDG E +A +VPGD++ ++ G I+PAD R++ D L++D
Sbjct: 167 SIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVD 226
Query: 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHF 241
QSALTGESL V K+ D+VF+ S K+GE V+ ATG +TF G+AA LV++ GHF
Sbjct: 227 QSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHF 286
Query: 242 QKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT 301
+VL IG + + ++ + + + ++ L + I G+P+ +P V++ T
Sbjct: 287 TEVLNGIGTILLILVIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGLPAVVTTT 345
Query: 302 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKE 361
MA+G+ L+++ AI ++++AIE +AG+++LCSDKTGTLT NKL++ GV+ E
Sbjct: 346 MAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPE 402
Query: 362 HVILLAARASRTENQ--DAIDAAIVGMLADPKEARAGVRE---VHFLPFNPVDKRTALTY 416
++L A A+ + + DAID A + L A++ + + + F PF+PV K+
Sbjct: 403 DLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVV 462
Query: 417 IDSDGNWHRASKGAPEQILALCN----CREDVRKKVHAVIDKFAERGLRSLGVARQEIPE 472
G KGAP +L E+V + + +FA RG RSLGVAR+
Sbjct: 463 ESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-- 520
Query: 473 KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532
W+++G++P DPPRHD+ +T+ A LG+++KM+TGD + I +ET R+LG+
Sbjct: 521 ------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL 574
Query: 533 GTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTG 592
GTN+Y + L + V + +E ADGFA VFP+HKY +V+ LQ+R ++ MTG
Sbjct: 575 GTNIYNAERLGLGGGGD-MPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTG 633
Query: 593 DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 652
DGVNDAP+LKKAD GIAV ++DAARSA+DIV PGL II A+ TSR IF RM Y +
Sbjct: 634 DGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVV 693
Query: 653 YAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLK 712
Y ++++I + + L I + +V+ IAI D + I+ D S P W L
Sbjct: 694 YRIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLP 753
Query: 713 EIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQA 772
+++ V+LG LA+ T + M + M L+LQ+S+
Sbjct: 754 KLWGMSVLLGVVLAVGTWITVTTMYAQ------GENGGIVQNFGNMDEVLFLQISLTENW 807
Query: 773 LIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYS 832
LIF+TR+ + P L+ A + ++AT ++ + + IW++S
Sbjct: 808 LIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWGWFEHSDT---SIVAVVRIWIFS 864
Query: 833 LVTYFPLDILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQ 884
+ + + + ++ + +D L+ K+ +K E+
Sbjct: 865 FGIFCIMGGVYYILQDSV---GFDNLMHGKSPKGNQKQRSLEDFVVSLQRVS 913
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 447 bits (1152), Expect = e-142
Identities = 223/1007 (22%), Positives = 378/1007 (37%), Gaps = 181/1007 (17%)
Query: 2 GGDKAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEE-K 58
GG + LE +K E ++ ++ + E+ ++ + S +GL++ A L GPN L +
Sbjct: 35 GGKRKEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPR 94
Query: 59 KESKVLKFLGFMWNPLSWVMEAAAIMAIALA---NGGGRDPDWQDFVGIIVLL---VINS 112
+ +KF + L +M AA + + G + + L+ V+
Sbjct: 95 GTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTG 154
Query: 113 TISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172
+ +E + N A+ + + V+RDG + +A LV GD++ +K GD VPAD R
Sbjct: 155 CFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIR 214
Query: 173 LLEGDPLKIDQSALTGESLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVH 222
+L+ K+D S+LTGES P T+ +P + F + C +G + +V+ TG
Sbjct: 215 ILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDR 274
Query: 223 TFFGKAAHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRK 274
T G+ A L ++ HF ++ +A+ A I+
Sbjct: 275 TIIGRIASLASGVENEKTPIAIEIEHFVDIIAG--------LAILFGATFFIVAMCIGYT 326
Query: 275 YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334
+ + + +++ +P + ++V +++ + RL+ + + K + A+E + V+CSD
Sbjct: 327 FLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSD 386
Query: 335 KTGTLTLNKLTV-----DRNLIEVFAKGVEKEHVI--------------LLAARASRTEN 375
KTGTLT N++TV D ++ + L RA+
Sbjct: 387 KTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSG 446
Query: 376 QDAIDAAIVGMLADPKEA------------RAGVRE----VHFLPFNPVDKR--TALTYI 417
QDA+ ++ D E G RE V +PFN +K + T
Sbjct: 447 QDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLE 506
Query: 418 DSDGNWHRA-SKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVA 466
D H KGAPE++L C+ E R+ G R LG
Sbjct: 507 DPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFC 566
Query: 467 RQEIPEKTKESPGAPWQ-----------LVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515
+ + EK A GL+ + DPPR + + + G+ V M+
Sbjct: 567 QLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMV 626
Query: 516 TGDQ----LAIGKETG--------RRLGMGTNMYPSSSLLGQDKDAS------IAALPVD 557
TGD AI G P + +D A + +
Sbjct: 627 TGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPS 686
Query: 558 ELIEKADG-----FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612
EL+E FA P+ K IV+ Q I +TGDGVND+PALKKADIG+A+
Sbjct: 687 ELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGI 746
Query: 613 A-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--------AVSITIRIVL 663
A +DAA++A+D++L + + I++ V R IF +K Y I I +
Sbjct: 747 AGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITV 806
Query: 664 GFMLIALIWKFDFSPFMVLIIAILNDGT-------------IMTISKDRVKPSPQPDSWK 710
L +L I + D IM + R + +
Sbjct: 807 SVPLP-------LGCITILFIELCTDIFPSVSLAYEKAESDIMH-LRPRNPKRDRLVNEP 858
Query: 711 L--KEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSL----------------- 751
L F G + A T F + ++ F G+R
Sbjct: 859 LAAYSYFQIGAIQS--FAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEW 916
Query: 752 ----RTRPDEMMAALYLQVSIISQ-ALIFVTRSRSWSFIER-----PGLLLATAFVIA-Q 800
R ++ + Q A + + ++R S ++ L++A F +
Sbjct: 917 TFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIG 976
Query: 801 LVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847
+ N F + W V + L+ + +I K G+R
Sbjct: 977 CFLCYCPGMPNI-F-NFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVR 1021
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 444 bits (1143), Expect = e-140
Identities = 209/1008 (20%), Positives = 380/1008 (37%), Gaps = 186/1008 (18%)
Query: 3 GDKAISLEEIKNE-SVDLERIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKLEE-KK 59
DK L+E+K E S+D ++ ++E+ + GLT+ L GPN L
Sbjct: 31 IDKKRDLDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPT 90
Query: 60 ESKVLKFLGFMWNPLSWVMEAAAIMAIAL------ANGGGRDPDWQDFVGIIVLLVINST 113
+ +KF ++ S ++ AI+ + + V + ++++
Sbjct: 91 TPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGC 150
Query: 114 ISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARL 173
S+ +E + + + + V+RDG S +A +V GD++ +K GD +PAD R+
Sbjct: 151 FSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRI 210
Query: 174 LEGDPLKIDQSALTGESLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVHT 223
+ K+D S+LTGES P T+ NP + F + C +G VV+ TG T
Sbjct: 211 ISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRT 270
Query: 224 FFGKAAHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275
G+ A L ++ HF ++T +AV + I+ + +
Sbjct: 271 VMGRIATLASGLEVGRTPIAIEIEHFIHIITG--------VAVFLGVSFFILSLILGYSW 322
Query: 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335
+ + L+ +++ +P + ++V + + + R++++ + K + A+E + +CSDK
Sbjct: 323 LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDK 382
Query: 336 TGTLTLNKLTV-----DRNLIEVFAKGVEKE--------------HVILLAARASRTENQ 376
TGTLT N++TV D + E + + L RA Q
Sbjct: 383 TGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQ 442
Query: 377 ------------DAIDAAIVGM----LADPKEARAGVREVHFLPFNPVDKR--TALTYID 418
DA ++A++ + R ++ +PFN +K +
Sbjct: 443 DNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEK 502
Query: 419 SDGNWHRA-SKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVAR 467
S + + KGAPE+IL C+ +ED+++ + G R LG
Sbjct: 503 SSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCH 562
Query: 468 QEIPEKT--------KESPGAPWQ---LVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 516
+PE + P P VGL+ + DPPR + + + + G+ V M+T
Sbjct: 563 FALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVT 622
Query: 517 GDQ----LAIGKETG--------RRLGMGTNMYPSSSLLGQDKDAS------IAALPVDE 558
GD AI K G P + +D A + L +
Sbjct: 623 GDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEV 682
Query: 559 LIEKADG-----FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA 613
L + FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+ +
Sbjct: 683 LDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIS 742
Query: 614 -TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--------AVSITIRIVLG 664
+D ++ A+D++L + + I++ V R IF +K Y + I+
Sbjct: 743 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGN 802
Query: 665 FMLIALIWKFDFSPFMVLIIAILNDGT-------------IMTISKDRVKPSPQPDSWKL 711
L +L I + D IM + P + KL
Sbjct: 803 VPLP-------LGTVTILCIDLGTDMVPAISLAYEQAESDIMK------RQPRNPKTDKL 849
Query: 712 KEIFATGVVLGSYLAIMTV----VFFWLMRK--------------------TDFFSDAFG 747
+ G I + +F ++ + +D
Sbjct: 850 VNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQ 909
Query: 748 VRSLRTRPDEMMAA--LYLQVSIISQ-ALIFVTRSRSWSFIER----PGLLLATAFVIA- 799
+ R + ++ Q A + + ++R S ++ L+ A
Sbjct: 910 QWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETAL 969
Query: 800 QLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847
++ + + R+ W + YSL+ + ++ +F IR
Sbjct: 970 AAFLSYCPG-TDVAL-RMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIR 1015
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 416 bits (1072), Expect = e-130
Identities = 228/977 (23%), Positives = 373/977 (38%), Gaps = 194/977 (19%)
Query: 23 PIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVMEA 80
EE S GLT D+ L +G N+L E+ +S + + L ++
Sbjct: 9 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLL 68
Query: 81 AAIMAIALA---NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKT 137
AA ++ LA G + + I+++L+ N+ + +E NA NA AL
Sbjct: 69 AACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMG 128
Query: 138 KVLRDGRWSEQ--DASILVPGDVISIKLGDIVPADARLL--EGDPLKIDQSALTGESLPV 193
KV R R S Q A +VPGD++ + +GD VPAD R+L + L++DQS LTGES+ V
Sbjct: 129 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 188
Query: 194 TKNP---YDE----------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN---- 236
K+ D +FSG+ G+ +V TGV T GK + +T
Sbjct: 189 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKT 248
Query: 237 ----QVGHFQKVLT-AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIG--- 288
++ F + L+ I C+ + I PV + G + +
Sbjct: 249 PLQQKLDEFGEQLSKVISLICVAVWLINI---GHFNDPVHGGSWIRGAIYYFKIAVALAV 305
Query: 289 -GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD 347
IP +P V++ +A+G+ R++++ AI + + ++E + V+CSDKTGTLT N+++V
Sbjct: 306 AAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVC 365
Query: 348 R--------------NLIEVFAKGVEKEHVILLAARASRTENQDAIDA-AIVGMLA---- 388
+ N + E +L + R+ D + A + L
Sbjct: 366 KMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSS 425
Query: 389 --------------DPKEA-------RAGVREVHF------------------------- 402
+ E + V
Sbjct: 426 LDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFT 485
Query: 403 LPFNPVDKRTALTYIDSDGNWHRAS-----KGAPEQILALCNC----------REDVRKK 447
L F+ K ++ + + KGAPE ++ CN V++K
Sbjct: 486 LEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEK 545
Query: 448 VHAVIDKF--AERGLRSLGVARQEIPEKTKESPGAPWQ----------LVGLLPLFDPPR 495
+ +VI ++ LR L +A ++ P K +E VG++ + DPPR
Sbjct: 546 ILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPR 605
Query: 496 HDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQDKDASI 551
+ +I+ + G+ V MITGD +AI + G + + G++
Sbjct: 606 KEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIG--IFGENEEVADRAYTGRE----F 659
Query: 552 AALPVDELIEKADG---FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
LP+ E E FA V P HK +IV+ LQ I MTGDGVNDAPALKKA+IGI
Sbjct: 660 DDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGI 719
Query: 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--------AVSITIR 660
A+ T A++AS++VL + S I++AV RAI+ MK + Y V I +
Sbjct: 720 AMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLT 779
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGT-------------IMTISKDRVKPSPQPD 707
LG P +L + ++ DG IM P +
Sbjct: 780 AALGLPEA-------LIPVQLLWVNLVTDGLPATALGFNPPDLDIM-----DRPPRSPKE 827
Query: 708 SWKLKEIFATGVVLGSYLAIMTV-VFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQV 766
+F + +G Y+ TV W + D GV + +
Sbjct: 828 PLISGWLFFRYMAIGGYVGAATVGAAAWWFM---YAEDGPGVTYHQLTHFMQCTEDHPHF 884
Query: 767 SIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCG--WGW 824
+ + + + + V ++ ++ N S R+ W
Sbjct: 885 EGLDCEIFEAPEPMTMAL---------SVLVTIEMCNALNSLSENQSLMRMPPWVNIWLL 935
Query: 825 AGVIW---LYSLVTYFP 838
+ L+ L+ Y
Sbjct: 936 GSICLSMSLHFLILYVD 952
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 4e-45
Identities = 134/549 (24%), Positives = 219/549 (39%), Gaps = 119/549 (21%)
Query: 121 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 179
G A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+
Sbjct: 197 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY 255
Query: 180 KIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 227
+D+S ++GE +PV K+ DEVF + G ++ G T K
Sbjct: 256 -VDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 314
Query: 228 A--AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLV 284
L D +V +F + + +I+ I I P+ L+
Sbjct: 315 PPIQRLAD---KVVAYFIPTVLLV------AISAFIYWYFIAHAPLLF-----AFTTLIA 360
Query: 285 LLIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 340
+L+ P A PT L+V G + ++ G + K A+E + + DKTGTLT
Sbjct: 361 VLVVACPCAFGLATPTALTV----GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLT 416
Query: 341 LNKLTVDRNLIEVFAKGVEKEHVILLAARA-SRTENQDAIDAAIVGMLADPKEARAGVRE 399
K V ++ ++ ++ LAA A R+E+ A AIV K+A
Sbjct: 417 KGKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALE---- 460
Query: 400 VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR------EDVRKKVHAVID 453
H + +K + G +G + + N R V +V ++
Sbjct: 461 -HGIELGEPEKVEVIA-----G------EGVVADGILVGNKRLMEDFGVAVSNEVELALE 508
Query: 454 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVK 513
K ++ VAR ++ G++ + D + + ++ +G+ V
Sbjct: 509 KLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVG 555
Query: 514 MITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573
MITGD + R L +D +I A V P
Sbjct: 556 MITGDNWRSAEAISRELN------------------------LDLVI------AEVLPHQ 585
Query: 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633
K E VK+LQ K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +
Sbjct: 586 KSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDV 644
Query: 634 ISAVLTSRA 642
++A+ SR
Sbjct: 645 VAAIQLSRK 653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 2e-44
Identities = 134/555 (24%), Positives = 224/555 (40%), Gaps = 119/555 (21%)
Query: 121 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 179
G A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+
Sbjct: 119 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 176
Query: 180 KIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 227
+D+S ++GE +PV K+ DEVF + G ++ G T K
Sbjct: 177 YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 236
Query: 228 A--AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLV 284
L D +V +F + T + +I+ I I P+ L+
Sbjct: 237 PPIQRLAD---KVVAYF--IPTVLL----VAISAFIYWYFIAHAPLLF-----AFTTLIA 282
Query: 285 LLIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 340
+L+ P A PT ++T+ +G + ++ G + K A+E + + DKTGTLT
Sbjct: 283 VLVVACPCAFGLATPT--ALTVGMG--KGAELGILIKNADALEVAEKVTAVIFDKTGTLT 338
Query: 341 LNKLTVDRNLIEVFAKGVEKEHVILLAARA-SRTENQDAIDAAIVGMLADPKEARAGVRE 399
K V ++ ++ ++ LAA A R+E+ A AIV K+A
Sbjct: 339 KGKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALE---- 382
Query: 400 VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR------EDVRKKVHAVID 453
H + +K + +G + + N R V +V ++
Sbjct: 383 -HGIELGEPEKVEVIA-----------GEGVVADGILVGNKRLMEDFGVAVSNEVELALE 430
Query: 454 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVK 513
K ++ VAR ++ G++ + D + + ++ +G+ V
Sbjct: 431 KLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVG 477
Query: 514 MITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573
MITGD + R L +D +I A V P
Sbjct: 478 MITGDNWRSAEAISRELN------------------------LDLVI------AEVLPHQ 507
Query: 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633
K E VK+LQ K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +
Sbjct: 508 KSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDV 566
Query: 634 ISAVLTSRAIFQRMK 648
++A+ SR ++K
Sbjct: 567 VAAIQLSRKTMSKIK 581
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 6e-30
Identities = 76/335 (22%), Positives = 130/335 (38%), Gaps = 71/335 (21%)
Query: 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVI-LLAARASRTEN 375
+ A E + + DKTGTLT + V ++ ++ ++ + A+ +R+E+
Sbjct: 2 RDRQAFERAKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAASLEARSEH 57
Query: 376 QDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQIL 435
A AAIV +EA V++ A+ G +
Sbjct: 58 PIA--AAIV------EEAEK-----RGFGLTEVEEFRAIP-----GKGVEGIVN--GRRY 97
Query: 436 ALCNCR--EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493
+ + ++ K ++K ++G + + + ++ G++ L D
Sbjct: 98 MVVSPGYIRELGIKTDESVEKLKQQGKTVVFILKNG-------------EVSGVIALADR 144
Query: 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAA 553
R +S E I + +G+ M+TGD + K LG
Sbjct: 145 IRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG---------------------- 182
Query: 554 LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA 613
+D+ A V P K E VK +Q++ M GDGVNDAPAL +AD+GIA+
Sbjct: 183 --LDDYF------AEVLPHEKAEKVKEVQQKYVT-AMVGDGVNDAPALAQADVGIAIGAG 233
Query: 614 TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
TD A +DIVL + + V SR + +
Sbjct: 234 TDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 3e-29
Identities = 33/166 (19%), Positives = 72/166 (43%), Gaps = 30/166 (18%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
+ + + D PR + + + + N G+ + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
+ E + + PE K I+++L++ + M GDGVNDA AL
Sbjct: 175 -------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 603 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
AD+ +A+ + D +++ +DI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 6e-29
Identities = 87/349 (24%), Positives = 139/349 (39%), Gaps = 87/349 (24%)
Query: 311 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARA 370
+ G + K A+E + + DKTGTLT K V ++ ++ ++ LAA A
Sbjct: 15 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAIA 70
Query: 371 -SRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 429
R+E+ A AIV K+A H + +K + G +G
Sbjct: 71 ERRSEHPIA--EAIV------KKALE-----HGIELGEPEKVEVIA-----G------EG 106
Query: 430 APEQILALCNCR------EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ 483
+ + N R V +V ++K ++ VAR +
Sbjct: 107 VVADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNG-------------R 153
Query: 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPS 539
+ G++ + D + + ++ +G+ V MITGD AI +E
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN------------ 201
Query: 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 599
+D +I A V P K E VK+LQ K + GDG+NDAP
Sbjct: 202 ----------------LDLVI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAP 238
Query: 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
AL +AD+GIAV +D A + DIVL L +++A+ SR ++K
Sbjct: 239 ALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 5e-25
Identities = 51/167 (30%), Positives = 72/167 (43%), Gaps = 33/167 (19%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
+ V LL + DP + + ETI G+ + M+TGD + LG
Sbjct: 544 KTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG----------- 592
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
+ +++ A + PE K IV L+++ I M GDGVNDAPAL
Sbjct: 593 -------------IKKVV------AEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALA 633
Query: 603 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 649
KADIGIA+ TD A ++ + L L I A S + M N
Sbjct: 634 KADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSEST---MSN 677
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 8e-18
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 123 GNAAAALMANLAPKT--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
G+A AL+ L P++ ++ DG E + GD++ ++ G+ +P D + EG
Sbjct: 213 GSAIRALL-KLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF- 270
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD----STN 236
+D+S +TGE +PV K +V + + G + G T + +V S
Sbjct: 271 VDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRA 330
Query: 237 QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMP- 295
+ ++ F I V +++ I+ G+ + +LI IA P
Sbjct: 331 PIQRLADTVSGW--FVPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLI----IACPC 384
Query: 296 -----TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNL 350
T +S+ + +G + +Q G + K A+E M ++ L DKTGTLT +
Sbjct: 385 ALGLATPMSIMVGVG--KGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKL---- 438
Query: 351 IEVFAKGVEKEHVILLAA 368
+ +++ + LAA
Sbjct: 439 TRIVTDDFVEDNALALAA 456
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 75.2 bits (186), Expect = 2e-16
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 125 AAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQ 183
A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+ +D+
Sbjct: 2 AIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 59
Query: 184 SALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 221
S ++GE +PV K+ DEVF + G + + AT V
Sbjct: 60 SMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV 95
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 2e-15
Identities = 29/159 (18%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 355 AKGVEKEHVILLAARASRTENQ--DAIDAAIV--GMLADPKEARAGVREVHFLPFNPVDK 410
G E V+ A S + + +D A++ + + +++ +PF+ +
Sbjct: 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR 69
Query: 411 RTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGL 460
R ++ ++ + KGA ++IL +C+ + + +K+ V D +GL
Sbjct: 70 RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGL 129
Query: 461 RSLGVARQEIPEKTKE-SPGAPWQLV--GLLPLFDPPRH 496
R + VA + +P + + L+ G + D H
Sbjct: 130 RVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHHHH 168
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 7e-15
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 121 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVP------GDVISIKLGDIVPADARL 173
A A L+ +L ++ + + V GD+I + G P D R+
Sbjct: 4 TMSEALAKLI-SLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRV 62
Query: 174 LEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 221
+EG +D+S +TGE++PV K P V +GS + G + ++ AT V
Sbjct: 63 IEGHS-MVDESLITGEAMPVAKKPGSTVIAGSINQNGSL--LICATHV 107
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.0 bits (147), Expect = 2e-09
Identities = 100/626 (15%), Positives = 172/626 (27%), Gaps = 202/626 (32%)
Query: 445 RKKVHAVIDKFA--------ERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRH 496
+ + D F + +S+ ++++EI + G L LF
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQDMPKSI-LSKEEIDHIIMS----KDAVSGTLRLFWTLLS 73
Query: 497 DSAETIRRALN--LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554
E +++ + L +N K + I E R+ M T MY
Sbjct: 74 KQEEMVQKFVEEVLRINYKFLMS---PIKTEQ-RQPSMMTRMYIEQ-------------- 115
Query: 555 PVDELIEKADGFAGVF---PEHKYEIVKRLQERKH-----ICGMTGDG--------VNDA 598
D L FA + ++ + L E + I G+ G G
Sbjct: 116 -RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSY 174
Query: 599 PALKKADIGI---AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 655
K D I + + S ++ L I TSR+ N +
Sbjct: 175 KVQCKMDFKIFWLNLKN----CNSPETVLEMLQKLLYQIDPNWTSRS--DHSSNIKLRIH 228
Query: 656 SITIRIVLGFM-------LIAL-------IWK-FDFS-PFMVL-----IIAILNDGTIMT 694
SI + L+ L W F+ S ++ + L+ T
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTH 288
Query: 695 ISKDRVKPSPQPDSWKLKEIFA--TG---------VVLGSYLAIMTVVF----------F 733
IS D + PD ++K + V+ + + +
Sbjct: 289 ISLDHHSMTLTPD--EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346
Query: 734 WLMRKTDFFSDAFGVRSLRT-RPDEMMAALYLQVSI------ISQALI------------ 774
W D + SL P E ++ ++S+ I L+
Sbjct: 347 WKHVNCDKLTTIIES-SLNVLEPAE-YRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDV 404
Query: 775 --FVTRSRSWSFIER---------PGLLLATAFVIAQLVA---TFIAVYA------NWSF 814
V + +S +E+ P + L + A + + Y +
Sbjct: 405 MVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL 464
Query: 815 ARIEGCGWGWAGVIWLYSLVTY-------------FP---LDILKF---GIRYILSGKAW 855
+ YS + + F LD +F IR+ AW
Sbjct: 465 IPPYLDQ-------YFYSHIGHHLKNIEHPERMTLFRMVFLD-FRFLEQKIRH--DSTAW 514
Query: 856 -------DTL--LENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYR 906
+TL L+ + D E L L E N I S Y
Sbjct: 515 NASGSILNTLQQLKFYKPYICDNDPKYERLVNAI------LDFLPKIEENLICSK---YT 565
Query: 907 EL---------SEIAEQAKRRAEVAR 923
+L I E+A + +V R
Sbjct: 566 DLLRIALMAEDEAIFEEAHK--QVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.7 bits (128), Expect = 2e-07
Identities = 104/708 (14%), Positives = 202/708 (28%), Gaps = 226/708 (31%)
Query: 24 IEEVFEQ-----LKCS------REGLTSDEGAHRLHVFGPNK----------LEEKKESK 62
I VFE C + L+ +E H + + L K+E
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS--KDAVSGTLRLFWTLLSKQEEM 78
Query: 63 VLKFLGFMWNP-LSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121
V KF+ + ++M I R P T +IE+
Sbjct: 79 VQKFVEEVLRINYKFLMS-----PIKTEQ---RQPS-------------MMTRMYIEQ-- 115
Query: 122 AGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDV--------ISIKLGDIVPADARL 173
RD ++ D + +V + L ++ PA L
Sbjct: 116 -------------------RDRLYN--DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL 154
Query: 174 LEGDPLKIDQSALTGESL---PVTKNPYDEVF--SGSTCKQGEIEAVVIATGVHTFFGKA 228
++G L ++ + + V ++F + C E ++ ++
Sbjct: 155 IDGV-LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213
Query: 229 AHLVD-STNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLI 287
D S+N + + ++ + Y + LLVLL
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRL------------------LKSKPYENC---LLVLL- 251
Query: 288 GGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK---- 343
+ + + L +T R + D L + T ++L+
Sbjct: 252 ---NVQNAKAWNA-FNLSCKIL-----LTTRFKQV-----TDFLSAATTTHISLDHHSMT 297
Query: 344 LTVDRNLIEVFAKGVEKE--------------HVILLAAR----ASRTEN-----QDAID 380
LT D + K ++ + ++A + +N D +
Sbjct: 298 LTPDEVK-SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT 356
Query: 381 AAIVGMLA--DPKEARAGVREVHFLPFN--PVDKRTALTYIDSDGNWHRASKGAPEQILA 436
I L +P E R F + P +I P +L+
Sbjct: 357 TIIESSLNVLEPAEYRK-----MFDRLSVFPPS-----AHI-------------PTILLS 393
Query: 437 L--CNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494
L + + V V++K + L V +Q P+++ S + +
Sbjct: 394 LIWFDVIKSD---VMVVVNKLHKYSL----VEKQ--PKESTIS------IPSIYLELKVK 438
Query: 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAA- 553
+ R + D I K + S L+ D +
Sbjct: 439 LENEYALHRSIV-----------DHYNIPKT-----------FDSDDLIPPYLDQYFYSH 476
Query: 554 ----LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609
L E E+ F VF + ++ + ++++ +G +N LK I
Sbjct: 477 IGHHLKNIEHPERMTLFRMVFLDFRF-LEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC 535
Query: 610 VADATDAARSASDIV--LTEPGLSVIIS--AVLTSRAIFQRMKNYTIY 653
D R + I+ L + ++I S L A+ ++ I+
Sbjct: 536 DNDPKY-ERLVNAILDFLPKIEENLICSKYTDLLRIALMA--EDEAIF 580
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 4e-06
Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K V ++ + G+ V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 628 PG 629
G
Sbjct: 142 SG 143
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
+ K +K+ E + I G+ VND P +AVA A D R A+ V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 628 PG 629
PG
Sbjct: 145 PG 146
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
+K L E+ I GD + D P ++K + +AVADA +D V
Sbjct: 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159
Query: 628 PG 629
G
Sbjct: 160 AG 161
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K + L I GD +NDA LK+ I A A R S I L +
Sbjct: 78 VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEK 137
Query: 628 PG 629
G
Sbjct: 138 RG 139
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K EI ++++E+ + G GD V D +KK +AV +A + R + +
Sbjct: 83 YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142
Query: 628 PG 629
G
Sbjct: 143 NG 144
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} Length = 52 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 2e-05
Identities = 12/21 (57%), Positives = 19/21 (90%)
Query: 903 NSYRELSEIAEQAKRRAEVAR 923
++ EL+++AE+AKRRAE+AR
Sbjct: 1 TNFNELNQLAEEAKRRAEIAR 21
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K + L++ + GD + D P +++ +G+AV++A +D
Sbjct: 93 VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTER 152
Query: 628 PG 629
G
Sbjct: 153 TG 154
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 28/128 (21%)
Query: 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 561
I+ + GV +I+G + AI + + LG+ +++ DK + L D+L+
Sbjct: 55 IKMLIASGVTTAIISGRKTAIVERRAKSLGI-EHLFQGRE----DK---LVVL--DKLLA 104
Query: 562 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 621
+ + E GD + D P +++ +G+AVA+A R +
Sbjct: 105 E----LQLGYEQ--------------VAYLGDDLPDLPVIRRVGLGMAVANAASFVREHA 146
Query: 622 DIVLTEPG 629
+ G
Sbjct: 147 HGITRAQG 154
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 13/62 (20%), Positives = 19/62 (30%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K L GD + D P + + + +AVADA + V
Sbjct: 123 SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRI 182
Query: 628 PG 629
G
Sbjct: 183 KG 184
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 4e-05
Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 28/128 (21%)
Query: 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 561
I+ ++ + V +++G I + LG+ + +K A +L++
Sbjct: 44 IKMLMDADIQVAVLSGRDSPILRRRIADLGI-KLFFLGKL----EK---ETAC--FDLMK 93
Query: 562 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 621
+ AGV E GD D PA AVADA ++A
Sbjct: 94 Q----AGVTAEQ--------------TAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAV 135
Query: 622 DIVLTEPG 629
D VL+ G
Sbjct: 136 DHVLSTHG 143
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 6e-05
Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 36/132 (27%)
Query: 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 561
++ +N G+ + +ITG + + R+ AL + +
Sbjct: 61 VKALMNAGIEIAIITGRR---SQIVENRM---------------------KALGISLI-- 94
Query: 562 KADGFAGVFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 617
+ G + K + + ++ I G GD + D P ++K + + VAD
Sbjct: 95 ----YQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLL 148
Query: 618 RSASDIVLTEPG 629
++ V G
Sbjct: 149 AQRANYVTHIKG 160
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 31/196 (15%), Positives = 54/196 (27%), Gaps = 25/196 (12%)
Query: 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSL-GVARQEIPEK 473
T +D + AP + +AL ++ V K ++ + L ++EI
Sbjct: 16 TITMNDNIINIMKTFAPPEWMAL---KDGVLSKTLSIKEGVGRM-FGLLPSSLKEEITSF 71
Query: 474 TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533
E R E + + +I+G +
Sbjct: 72 VLEDA--------------KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK 117
Query: 534 TNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 593
+Y + + D G K ++ L E M GD
Sbjct: 118 DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC------KPSVIHELSEPNQYIIMIGD 171
Query: 594 GVNDAPALKKADIGIA 609
V D A K +D+ A
Sbjct: 172 SVTDVEAAKLSDLCFA 187
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+F K E++ LQ +I + GDG ND K A I IA +A + + +
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 625 LTEPGLSVII 634
+ EP L++I
Sbjct: 197 INEPDLALIK 206
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 3e-04
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ K EI++++ + + I GDG ND KKA + IA A + +DI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 625 LTEPGLSVII 634
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
V + K +I+ L ++ + GDG ND + A +G+A A + +
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 625 LTEPGLSVII 634
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 5e-04
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ +K + + L R +I GDG ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 625 LTEPGLSVII 634
+ G +++
Sbjct: 301 INYHGFELLL 310
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 923 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.95 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.95 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.95 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.94 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.93 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.89 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.79 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.38 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.25 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.16 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.12 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.12 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.04 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.03 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.02 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.91 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.87 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.86 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.8 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.74 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.67 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.63 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.62 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.6 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.59 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.54 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.53 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.46 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.43 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.41 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.41 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.41 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.4 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.37 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.37 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.35 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.34 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.26 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.22 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.21 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.2 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.2 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.12 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.12 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.08 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.05 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.01 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.96 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.96 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.95 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 97.95 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.95 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 97.94 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.92 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.9 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.88 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.88 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.87 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.86 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.83 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.82 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.82 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.81 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.81 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.8 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.8 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.79 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.76 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.75 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.75 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.7 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.69 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.68 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.67 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.64 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.64 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.53 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.51 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.49 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.48 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.48 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.46 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.44 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.44 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.44 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.44 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.43 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.43 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.43 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.42 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.41 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.4 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.4 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.4 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.38 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.34 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.34 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.3 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.28 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.25 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.22 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.19 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.15 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.9 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 96.87 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.69 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.59 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.58 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 96.54 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.52 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.31 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.27 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.26 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.25 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.23 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.19 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.08 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.99 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.76 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.71 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.65 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.59 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 95.57 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 95.45 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.24 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.11 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.07 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 94.48 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 94.36 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.0 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 93.59 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 93.24 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 93.0 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 92.22 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 92.14 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 90.93 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 90.31 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 90.24 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 87.21 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 85.87 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 85.7 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 85.05 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 83.54 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-148 Score=1369.23 Aligned_cols=876 Identities=87% Similarity=1.329 Sum_probs=740.7
Q ss_pred chHHhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHhhchHHHHHHHHHHHHHH
Q 002430 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIA 87 (923)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~ 87 (923)
.+++..++..|+|+++.+|+++.|+++.+|||++|+++|+++||+|++++++++.|+.|++||++|++++|+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~ 82 (885)
T 3b8c_A 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIA 82 (885)
T ss_dssp ---------CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGG
T ss_pred chhhhhhcchhhHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36777788899999999999999999989999999999999999999999888899999999999999999999999999
Q ss_pred HhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCee
Q 002430 88 LANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (923)
Q Consensus 88 l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~I 167 (923)
++...+.+.+|.++++|+++++++..++++||+|+++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|
T Consensus 83 l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~I 162 (885)
T 3b8c_A 83 LANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDII 162 (885)
T ss_dssp SSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCC
T ss_pred HHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEE
Confidence 87555556689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecCCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccCCCCcHHHHHHH
Q 002430 168 PADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247 (923)
Q Consensus 168 PaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~~~~~~~~~~~~ 247 (923)
||||+|++|+.++||||+|||||.|+.|.+||.+|+||.+.+|++.++|++||.+|.+||+++++++..+++++|+.+++
T Consensus 163 PaDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~ 242 (885)
T 3b8c_A 163 PADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242 (885)
T ss_dssp SSCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHH
T ss_pred eeceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHH
Confidence 99999999987899999999999999999999999999999999999999999999999999999877788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccC
Q 002430 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 327 (923)
Q Consensus 248 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~ 327 (923)
++.+++..+++++++.+++.|...+.+|.+++..++++++++|||+||+++++++++|+.+|+++|+++|+++++|+||+
T Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~ 322 (885)
T 3b8c_A 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 322 (885)
T ss_dssp HHHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhC
Confidence 98875544443233323334444456788899999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCC
Q 002430 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (923)
Q Consensus 328 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s 407 (923)
+|+||||||||||+|+|+|.+..+..+..+.++++++.+++.++...++||++.|++.++.++.+.+..++.++++||+|
T Consensus 323 v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s 402 (885)
T 3b8c_A 323 MDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNP 402 (885)
T ss_dssp CCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCT
T ss_pred CCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCc
Confidence 99999999999999999998654333444667788888888888765679999999999887766667788999999999
Q ss_pred CCcceEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEE
Q 002430 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (923)
Q Consensus 408 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~ 487 (923)
.+|||++++++.+|+.+.++|||||.++++|+.+++.++.+.+.+++++++|+|++++|++++++.+.+..|++++|+|+
T Consensus 403 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGl 482 (885)
T 3b8c_A 403 VDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482 (885)
T ss_dssp TTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEE
T ss_pred ccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEE
Confidence 99999998877778888999999999999998666666778888999999999999999999887777788999999999
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002430 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
++++||||||++++|++||++||+|+|+||||+.||.+||+++||..+..+...+.|.+.+..+++.++++++++.++||
T Consensus 483 i~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~a 562 (885)
T 3b8c_A 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFA 562 (885)
T ss_dssp EEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEE
T ss_pred EEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEE
Confidence 99999999999999999999999999999999999999999999987666667777877766688889999999999999
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHH
Q 002430 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 647 (923)
Q Consensus 568 r~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i 647 (923)
|++|+||.++|+.||++|++|+|+|||+||+||||+|||||||++|+|+|+++||+|+++++|++|+.++++||++|+||
T Consensus 563 rv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni 642 (885)
T 3b8c_A 563 GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRM 642 (885)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHH
T ss_pred EECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHhcccccccccCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 002430 648 KNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727 (923)
Q Consensus 648 ~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~ 727 (923)
++|+.|++++|+..++.+++..++++++++|+|++|+++++|++++++++|+.+|+++|++|..++++..+++.|+++++
T Consensus 643 ~~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il~i~l~~d~~~l~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~ 722 (885)
T 3b8c_A 643 KNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722 (885)
T ss_dssp HHHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHHHHHHHHHTTTCCCCCCCCCCSSCCCSTTTTTTTTTHHHHHSSTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcCcCHHHHHHHHHHHHHHHHhhcccccCcccCCcchhHHHHHHHHHHHHHHHHH
Confidence 99999999999976666666666788999999999999999999999999999999999999988888888899999999
Q ss_pred HHHHHHHHHHhccccccccCccccCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccchhHHHHHHHHHHHHHHHHHH
Q 002430 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIA 807 (923)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 807 (923)
.++++|++.+..++++..++.+...++..+.++.+|+..+++.++++|++|+++++++++|++++++++++..++.++++
T Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (885)
T 3b8c_A 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIATLIA 802 (885)
T ss_dssp HHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGGTTCSSSCTTTSTTSTTTTTSGGGSSTTTTTTSSS
T ss_pred HHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccCccHHHHHHHHHHHHHHHHHH
Confidence 99887776654444443344322211234566777776666677789999999988888887777766666655656666
Q ss_pred HhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhccccccccccCChhHHHHHHHHH
Q 002430 808 VYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAA 883 (923)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (923)
+|.++.+..+.+++|.||+++|+++++++++.|+.|++.|+.+...+|...++++..+.+++++++++|+.+|+.+
T Consensus 803 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (885)
T 3b8c_A 803 VYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRG 878 (885)
T ss_dssp SSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC----------------------------------
T ss_pred HhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHhhhhccccccccchhccccccccccccc
Confidence 7766666668899999999999999999999999999999999889999999999999999999999999999765
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-135 Score=1246.07 Aligned_cols=826 Identities=37% Similarity=0.598 Sum_probs=702.8
Q ss_pred HHcCCC-CCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHH
Q 002430 29 EQLKCS-REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVL 107 (923)
Q Consensus 29 ~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~ 107 (923)
+.|+++ .+|||++|+++|+++||+|++++++++.|..|++||++|++++|+++++++++++ +|.++++|+++
T Consensus 78 ~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g-------~~~~~~~i~~v 150 (920)
T 1mhs_A 78 DMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLE-------DWVDFGVICGL 150 (920)
T ss_dssp TTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------CSSHHHHHHHH
T ss_pred HHhCCCcCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hHHHHHHHHHH
Confidence 457776 5799999999999999999999888999999999999999999999999998875 89999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCC-eEEEeccc
Q 002430 108 LVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP-LKIDQSAL 186 (923)
Q Consensus 108 ~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~-~~Vdes~L 186 (923)
++++++++++||+|+++++++|+++.+++++|+|||++++|++++|||||+|.|++||+|||||+|++|+. +.||||+|
T Consensus 151 v~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~L 230 (920)
T 1mhs_A 151 LLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSAL 230 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999974 89999999
Q ss_pred cCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 187 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEII 265 (923)
Q Consensus 187 TGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~ 265 (923)
||||.||.|.+||.+|+||.+.+|.+.++|++||.+|++||++++++++. +++++|+.+++++.++++++++.+++.++
T Consensus 231 TGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~ 310 (920)
T 1mhs_A 231 TGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWV 310 (920)
T ss_dssp SSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998774 78999999999998766554443332222
Q ss_pred HHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcce
Q 002430 266 IMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT 345 (923)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~ 345 (923)
.+...+.++.+.+.+++++++++|||+||++++++++.|+.+|+++|+++|+++++|+||++++||||||||||+|+|+
T Consensus 311 -~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~ 389 (920)
T 1mhs_A 311 -SSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLS 389 (920)
T ss_dssp -TTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSC
T ss_pred -HHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCcccccee
Confidence 2223456788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeecccCCChHHHHHHHHHHccccCc--chHHHHHHHhcC---ChhhhhcCceeEEeecCCCCCcceEEEEEecC
Q 002430 346 VDRNLIEVFAKGVEKEHVILLAARASRTENQ--DAIDAAIVGMLA---DPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420 (923)
Q Consensus 346 v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~--~~~~~ai~~~~~---~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~ 420 (923)
|.++.. ..+.++++++..++.++..... ||++.|++.++. ........++.++++||+|.+|+|++++++.+
T Consensus 390 v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~ 466 (920)
T 1mhs_A 390 LHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQ 466 (920)
T ss_dssp CCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCSS
T ss_pred EEEEee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeCC
Confidence 998763 2345566666666665544444 999999998652 11223456889999999999999999988777
Q ss_pred CcEEEEEcCcHHHHHHhccC----ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCc
Q 002430 421 GNWHRASKGAPEQILALCNC----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRH 496 (923)
Q Consensus 421 g~~~~~~KGa~e~il~~~~~----~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~ 496 (923)
|+.+.++|||||.++++|+. +++.++.+.+.+++++++|+|++++|++.. |++|+|+|+++++|||||
T Consensus 467 g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~--------e~~l~~lGli~i~Dp~R~ 538 (920)
T 1mhs_A 467 GERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG--------EGSWEILGIMPCMDPPRH 538 (920)
T ss_dssp SSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS--------SCSCCCCBBCCCCCCCCH
T ss_pred CcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc--------ccccEEEEEEEEeccccc
Confidence 88889999999999999975 344567788899999999999999999841 568999999999999999
Q ss_pred cHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCC--cccCcccccccCcchHHHHhhhcCeEEecChhhH
Q 002430 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS--SLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (923)
Q Consensus 497 ~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K 574 (923)
|++++|++||++||+|+|+||||+.||.+||+++||..+.++.. .+.|. +.++++++.+.+++.++|||++|+||
T Consensus 539 ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~~el~~~~~~~~V~arv~P~~K 615 (920)
T 1mhs_A 539 DTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPGSEVYDFVEAADGFAEVFPQHK 615 (920)
T ss_dssp HHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGGGGGGTTTTTTSCEESCCSTHH
T ss_pred cHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc---ccCCHHHHHHHHhhCeEEEEeCHHHH
Confidence 99999999999999999999999999999999999975332222 23333 35677888889999999999999999
Q ss_pred HHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHH
Q 002430 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (923)
Q Consensus 575 ~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 654 (923)
.++|+.||++|++|+|||||+||+||||+||||||||+|+|+|+++||+|+++++|++|+.++++||++|+||++++.|.
T Consensus 616 ~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~ 695 (920)
T 1mhs_A 616 YNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYR 695 (920)
T ss_dssp HHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHhcccccccccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 655 VSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFW 734 (923)
Q Consensus 655 ~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 734 (923)
++.|+.....+......++++++|.+++|+++++|++++++++|+.+++++|++|+.++++..+++.|+++++.+++.|+
T Consensus 696 l~~n~~~~~~~~~~~~~~~~~l~~~~il~~~l~~d~~~lal~~e~~~~~~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 775 (920)
T 1mhs_A 696 IALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMSVLLGVVLAVGTWITVT 775 (920)
T ss_dssp HHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHHTTHHHHCCCCCSGGGGSCCCCCSSSCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhhhhcccCcccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998764444444455677899999999999999988999999988888888888777777777889999988876665
Q ss_pred HHHhccccccccCccccCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHhhcccc
Q 002430 735 LMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYANWSF 814 (923)
Q Consensus 735 ~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 814 (923)
+.+..+ ...+ ...+..+.+|++|+.+++++.+++|++|+.+++|.+.+++++++++++.+++.+++++++ +
T Consensus 776 ~~~~~~---~~~~---~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 846 (920)
T 1mhs_A 776 TMYAQG---ENGG---IVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG---W 846 (920)
T ss_dssp HHTTTT---TTCC---SSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSS---S
T ss_pred HHHHhc---cccc---ccchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHHHHHHHHHHhh---h
Confidence 543210 0011 011234578999999999999999999998887777788888888888877776665432 5
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhccccccccccCChhHHHHHHHHHhhhhhcCCC
Q 002430 815 ARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQP 892 (923)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (923)
+...+++|.+|+.+|+++++++++.++.|++.++. ..|++.++.+..+++++++ +-..+.++.|+.+.+|+
T Consensus 847 f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~---~~fd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 917 (920)
T 1mhs_A 847 FEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDS---VGFDNLMHGKSPKGNQKQR----SLEDFVVSLQRVSTQHE 917 (920)
T ss_dssp TTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCC---CTTHHHHHHHSTTTHHHHH----HHHHHHHHHGGGHHHHH
T ss_pred hccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh---HHHHHHhccCccccccccc----cchHHHHHHHHHHhhhc
Confidence 56788999999999999999999999999765543 3556666666654444432 22336666666654443
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-126 Score=1201.23 Aligned_cols=840 Identities=23% Similarity=0.361 Sum_probs=684.3
Q ss_pred cchHHhhcc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHH
Q 002430 7 ISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAI 83 (923)
Q Consensus 7 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ai 83 (923)
.+++++++| ..+||.++.+|+++.|+++ .+|||++||++|+++||+|++++++ .+.|++|++||++|++++++++++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~ 119 (1034)
T 3ixz_A 40 EKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAA 119 (1034)
T ss_pred hhHHHHhhhcCcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHH
Confidence 357788888 8899999999999999998 5799999999999999999998766 578999999999999999999999
Q ss_pred HHHHHhc---CC---CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCc
Q 002430 84 MAIALAN---GG---GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGD 157 (923)
Q Consensus 84 l~~~l~~---~~---~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GD 157 (923)
++++.+. .. ....+|.++++|++++++|++++++||+|+++++++|+++.+++++|+|||++++|+++||||||
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GD 199 (1034)
T 3ixz_A 120 ICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGD 199 (1034)
T ss_pred HHHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCc
Confidence 9987541 11 11235788889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC----------CcccccceeecCeEEEEEEEecchhhHHh
Q 002430 158 VISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIEAVVIATGVHTFFGK 227 (923)
Q Consensus 158 iV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~----------~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~ 227 (923)
||.|++||+|||||+|++|+++.||||+|||||.||.|.++ |++|+||.+.+|++.++|++||.+|.+||
T Consensus 200 iV~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~Gk 279 (1034)
T 3ixz_A 200 LVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGR 279 (1034)
T ss_pred EEEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhH
Confidence 99999999999999999998899999999999999999875 56899999999999999999999999999
Q ss_pred HHhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHH
Q 002430 228 AAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (923)
Q Consensus 228 i~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~ 306 (923)
++++++.. .+++|+|+.+++++.++..+++++.++. ++.+...+.+|.+++..++++++++|||+||+++++++++++
T Consensus 280 I~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~ 358 (1034)
T 3ixz_A 280 IASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATF-FIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTA 358 (1034)
T ss_pred HHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHH
Confidence 99999876 5789999999999887654444322222 223334567888999999999999999999999999999999
Q ss_pred hhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccC-----------C--C---hHHHHHHHHHH
Q 002430 307 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG-----------V--E---KEHVILLAARA 370 (923)
Q Consensus 307 ~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~-----------~--~---~~~~l~~a~~~ 370 (923)
++|+++|++||+++++|+||++++||||||||||+|+|+|.++++...... . . ...++..++.|
T Consensus 359 ~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc 438 (1034)
T 3ixz_A 359 KRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLC 438 (1034)
T ss_pred HHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999875321100 0 0 01344444444
Q ss_pred ccc---------------cCcchHHHHHHHhcC----ChhhhhcCceeEEeecCCCCCcceEEEEEec---CCcEEEEEc
Q 002430 371 SRT---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS---DGNWHRASK 428 (923)
Q Consensus 371 ~~~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~---~g~~~~~~K 428 (923)
+.. ..+||.|.|++.++. +....+..++.++.+||+|.+|+|++++... +|++.+++|
T Consensus 439 ~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~K 518 (1034)
T 3ixz_A 439 NRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMK 518 (1034)
T ss_pred ccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEe
Confidence 321 124789999887652 4455677889999999999999998887643 367899999
Q ss_pred CcHHHHHHhccC----------ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-----------CCCCCCceEEEE
Q 002430 429 GAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQLVGL 487 (923)
Q Consensus 429 Ga~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~-----------~~~e~~l~llG~ 487 (923)
||||.|+++|+. +++.++.+.+.+++++.+|+|||++|++.+++.+. +..|++|+|+|+
T Consensus 519 GApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGl 598 (1034)
T 3ixz_A 519 GAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGL 598 (1034)
T ss_pred CChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEE
Confidence 999999999963 34567788999999999999999999998865421 235789999999
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCC----------------------CCcccCc
Q 002430 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSLLGQ 545 (923)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~----------------------~~~l~~~ 545 (923)
++++||||++++++|++|+++||+|+|+|||++.||.++|+++||..+... ...+.|.
T Consensus 599 v~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~ 678 (1034)
T 3ixz_A 599 VSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGM 678 (1034)
T ss_pred EeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecH
Confidence 999999999999999999999999999999999999999999999643110 0112222
Q ss_pred ccccccCcchHHHHhhhcC--eEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-cchHHHhhccC
Q 002430 546 DKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASD 622 (923)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~gtd~A~~aAD 622 (923)
+. ..++++++.+.+.+.. +|||++|+||.++|+.+|+.|++|+|+|||+||+||||+||+||||| +|+|+||++||
T Consensus 679 ~l-~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD 757 (1034)
T 3ixz_A 679 QL-KDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAAD 757 (1034)
T ss_pred hh-hhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcC
Confidence 22 2445566777776654 99999999999999999999999999999999999999999999999 99999999999
Q ss_pred EEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCCcHHHHHHHHHHhccc-ccccccCCC
Q 002430 623 IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIWKFDFSPFMVLIIAILNDGT-IMTISKDRV 700 (923)
Q Consensus 623 ivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~-~~~~~~~~~~~il~i~l~~d~~-~~~l~~~~~ 700 (923)
+|+.++++++|+.++++||++|+|++|++.|.+++|+..++.++++. +..+.|++|+|++|+|+++|++ ++++++|++
T Consensus 758 ~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~ 837 (1034)
T 3ixz_A 758 MILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKA 837 (1034)
T ss_pred EEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999998777665544 4467899999999999999985 799999998
Q ss_pred CCC---CCCCch-----hHHHHHHH-HHHHHHHHHHHHHHHHHHHHh-cccccc-ccCcc---------ccCC-------
Q 002430 701 KPS---PQPDSW-----KLKEIFAT-GVVLGSYLAIMTVVFFWLMRK-TDFFSD-AFGVR---------SLRT------- 753 (923)
Q Consensus 701 ~~~---~~p~~~-----~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~g~~---------~~~~------- 753 (923)
++. ++|+++ ..++++.. .+..|+++++.+++.|++.+. .++.+. .+|.. ...+
T Consensus 838 ~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1034)
T 3ixz_A 838 ESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWT 917 (1034)
T ss_pred ChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccc
Confidence 654 122221 22334443 345688888888876665442 232211 01110 0000
Q ss_pred ------CHHHHHHHHHHHHHHHHHHHhhhhccCCCCccc---chhHHHHHHHHHHHHHHHHHHHhhc--ccccccccchh
Q 002430 754 ------RPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVYAN--WSFARIEGCGW 822 (923)
Q Consensus 754 ------~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 822 (923)
.....+|++|.++++++.+++|++|+++.+.+. ..|+++++++++.+++..++ .|.+ -.+++..+++|
T Consensus 918 ~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~ 996 (1034)
T 3ixz_A 918 FGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFL-CYCPGMPNIFNFMPIRF 996 (1034)
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHH-HHhhhHHHHhcCCCCCH
Confidence 012367999999999999999999997643222 23446666766665554333 4433 23456778899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002430 823 GWAGVIWLYSLVTYFPLDILKFGIRYI 849 (923)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~K~~~~~~ 849 (923)
.+|++++++++++++++++.|++.|++
T Consensus 997 ~~w~~~~~~~~~~~~~~e~~K~~~r~~ 1023 (1034)
T 3ixz_A 997 QWWLVPMPFGLLIFVYDEIRKLGVRCC 1023 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999998865
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-126 Score=1200.53 Aligned_cols=838 Identities=23% Similarity=0.367 Sum_probs=683.7
Q ss_pred hHHhhcc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHH
Q 002430 9 LEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMA 85 (923)
Q Consensus 9 ~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~ 85 (923)
+++++++ .++||.++.+++++.|+++ .+|||++|+++|+++||+|+++.++ .+.|+.|++||++|++++|+++++++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls 116 (1028)
T 2zxe_A 37 LDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILC 116 (1028)
T ss_dssp CCTTTTSCCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHH
T ss_pred HHHHhhhcCcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4556555 7799999999999999998 6899999999999999999999874 78899999999999999999999999
Q ss_pred HHHhc-----CC-CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEE
Q 002430 86 IALAN-----GG-GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVI 159 (923)
Q Consensus 86 ~~l~~-----~~-~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV 159 (923)
++++. +. ....+|+++++|+++++++++++++||+|+++++++|+++.+++++|+|||++++|+++||||||||
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV 196 (1028)
T 2zxe_A 117 FLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLV 196 (1028)
T ss_dssp HHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEE
T ss_pred HHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEE
Confidence 88642 11 1123677888899999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCC----------cccccceeecCeEEEEEEEecchhhHHhHH
Q 002430 160 SIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAA 229 (923)
Q Consensus 160 ~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~----------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~ 229 (923)
.|++||+|||||+|++|++|.||||+|||||+||.|.+++ ++|+||.+.+|.+.++|++||.+|.+||++
T Consensus 197 ~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~ 276 (1028)
T 2zxe_A 197 EVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIA 276 (1028)
T ss_dssp EEETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHH
T ss_pred EECCCCEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHH
Confidence 9999999999999999977999999999999999999886 499999999999999999999999999999
Q ss_pred hhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhh
Q 002430 230 HLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308 (923)
Q Consensus 230 ~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~ 308 (923)
+++..+ .+++++|+.+++++.++..++++..++.+++. .+.+.+|..++.+++++++++|||+||+++++++++++.+
T Consensus 277 ~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~ 355 (1028)
T 2zxe_A 277 TLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILS-LILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 355 (1028)
T ss_dssp HHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHH
Confidence 999876 57899999999999876555443333322222 2345678888999999999999999999999999999999
Q ss_pred hhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeee--cc-cC-----------CCh--HHHHHHHHHHcc
Q 002430 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV--FA-KG-----------VEK--EHVILLAARASR 372 (923)
Q Consensus 309 l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~--~~-~~-----------~~~--~~~l~~a~~~~~ 372 (923)
|+++|++||+++++|+||++++||||||||||+|+|+|.+++... +. .+ .++ +.++..++.|+.
T Consensus 356 mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~ 435 (1028)
T 2zxe_A 356 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNR 435 (1028)
T ss_dssp HHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCC
T ss_pred HhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999986521 10 00 011 245555555431
Q ss_pred c---------------cCcchHHHHHHHhcC----ChhhhhcCceeEEeecCCCCCcceEEEEEec---CCcEEEEEcCc
Q 002430 373 T---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS---DGNWHRASKGA 430 (923)
Q Consensus 373 ~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~---~g~~~~~~KGa 430 (923)
. ..+||+|.|++.++. +....+..++.++++||+|.+|||+++++.. +|++++++|||
T Consensus 436 ~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA 515 (1028)
T 2zxe_A 436 AVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGA 515 (1028)
T ss_dssp CEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEEC
T ss_pred CeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCC
Confidence 1 124889999988763 3444566789999999999999999999863 57889999999
Q ss_pred HHHHHHhccC----------ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-----------CCCCCCceEEEEec
Q 002430 431 PEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQLVGLLP 489 (923)
Q Consensus 431 ~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~-----------~~~e~~l~llG~i~ 489 (923)
||.|+++|.. +++.++.+.+.+++++++|+|||++|++++++.++ +..|.+++|+|+++
T Consensus 516 ~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~ 595 (1028)
T 2zxe_A 516 PERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMA 595 (1028)
T ss_dssp HHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEE
T ss_pred cHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeec
Confidence 9999999963 34556788889999999999999999998865321 23478999999999
Q ss_pred cCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCC----------------------CCcccCccc
Q 002430 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSLLGQDK 547 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~----------------------~~~l~~~~~ 547 (923)
++||||||++++|++|+++||+|+|+|||++.||.++|++|||..+... ..++.|.+.
T Consensus 596 i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l 675 (1028)
T 2zxe_A 596 MIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDL 675 (1028)
T ss_dssp EECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHH
T ss_pred cCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHh
Confidence 9999999999999999999999999999999999999999999743110 011222222
Q ss_pred ccccCcchHHHHhhhcC--eEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-cchHHHhhccCEE
Q 002430 548 DASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIV 624 (923)
Q Consensus 548 ~~~~~~~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~gtd~A~~aADiv 624 (923)
..++++++++++.+.+ +|||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+|+++||+|
T Consensus 676 -~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~V 754 (1028)
T 2zxe_A 676 -KDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMI 754 (1028)
T ss_dssp -TTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEE
T ss_pred -hhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEE
Confidence 2345667788887776 99999999999999999999999999999999999999999999999 7999999999999
Q ss_pred ecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCCcHHHHHHHHHHhccc-ccccccCCCCC
Q 002430 625 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKP 702 (923)
Q Consensus 625 l~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~-~~~~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~ 702 (923)
+.+++|++|+.++++||++|+|+++++.|.+++|+..++.++++. +..+.|++|+|++|+|+++|++ ++++++|++++
T Consensus 755 l~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~ 834 (1028)
T 2zxe_A 755 LLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAES 834 (1028)
T ss_dssp ETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSS
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccch
Confidence 999999999999999999999999999999999998776665544 3467899999999999999975 68999998765
Q ss_pred C---CCCCch-----hHHHHHHH-HHHHHHHHHHHHHHHHHHHHh-cccccc--------ccC--ccccC----C-----
Q 002430 703 S---PQPDSW-----KLKEIFAT-GVVLGSYLAIMTVVFFWLMRK-TDFFSD--------AFG--VRSLR----T----- 753 (923)
Q Consensus 703 ~---~~p~~~-----~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~-~~~~~~--------~~g--~~~~~----~----- 753 (923)
. ++|+++ ..++.+.. ++..|+++++++++.|++.+. .++.+. ++. ..... .
T Consensus 835 ~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1028)
T 2zxe_A 835 DIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYE 914 (1028)
T ss_dssp CGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHH
T ss_pred hhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchh
Confidence 3 223322 22343333 456799999988876665432 122100 000 00000 0
Q ss_pred ----CHHHHHHHHHHHHHHHHHHHhhhhccCCCCcc--cchhHHHHHHHHHHHHHHHHHHHhhc--ccccccccchhhHH
Q 002430 754 ----RPDEMMAALYLQVSIISQALIFVTRSRSWSFI--ERPGLLLATAFVIAQLVATFIAVYAN--WSFARIEGCGWGWA 825 (923)
Q Consensus 754 ----~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 825 (923)
...+.+|++|+.+++++.+++|++|+++.+++ ..+++++++++++.+++..++ +|.+ ..++.+.+++|.+|
T Consensus 915 ~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w 993 (1028)
T 2zxe_A 915 QRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFL-SYCPGTDVALRMYPLKPSWW 993 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHH-HHSTTHHHHTCCCCCCGGGG
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHH-HHhhhHHhhhcCCCCCHHHH
Confidence 01257899999999999999999999765322 235557777777666665444 4433 23446777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 002430 826 GVIWLYSLVTYFPLDILKFGIRYI 849 (923)
Q Consensus 826 ~~~~~~~~~~~~~~~~~K~~~~~~ 849 (923)
+++++++++.+++.++.|++.|++
T Consensus 994 ~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 994 FCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp GTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc
Confidence 888889999999999999887653
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-122 Score=1166.68 Aligned_cols=830 Identities=27% Similarity=0.351 Sum_probs=666.3
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCC---
Q 002430 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGG--- 92 (923)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~--- 92 (923)
+||.++.+++++.|+++ .+|||++|+++|+++||+|++++++ +++|+.|++||++|++++++++++++++++...
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~ 83 (995)
T 3ar4_A 4 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 83 (995)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred hhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 58999999999999997 5799999999999999999999865 688999999999999999999999999986422
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCe--EEEEeCCCCCCCcEEEEeCCCeeccc
Q 002430 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR--WSEQDASILVPGDVISIKLGDIVPAD 170 (923)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~--~~~i~~~~Lv~GDiV~l~~Gd~IPaD 170 (923)
+...+|.++++|++++++++.++++||+|+++++++|+++.+++++|+|||+ .++|+++||||||+|.|++||+||||
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD 163 (995)
T 3ar4_A 84 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPAD 163 (995)
T ss_dssp GGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred cchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCccccc
Confidence 1123788999999999999999999999999999999999999999999987 69999999999999999999999999
Q ss_pred eEEEe--cCCeEEEeccccCCCcceecCCC-------------CcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc
Q 002430 171 ARLLE--GDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (923)
Q Consensus 171 ~~ll~--g~~~~Vdes~LTGEs~pv~K~~~-------------~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~ 235 (923)
|+|++ ++.|+||||+|||||+||.|+++ |.+|+||.+.+|.+.++|++||.+|.+||++++++.+
T Consensus 164 ~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 243 (995)
T 3ar4_A 164 IRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAAT 243 (995)
T ss_dssp EEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTC
T ss_pred EEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcC
Confidence 99964 45789999999999999999987 6899999999999999999999999999999999876
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----ccchH----HHHHHHHHHHHhhccCchhHHHHHHHHHH
Q 002430 236 -NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQ-----HRKYR----DGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305 (923)
Q Consensus 236 -~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~----~~~~~~~~lli~~iP~~L~~~~~~~~~~~ 305 (923)
.+++|+|+.+++++.++..++++..++.+++.+..+ +.+|. ..+..++++++++|||+||++++++++.+
T Consensus 244 ~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~ 323 (995)
T 3ar4_A 244 EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALG 323 (995)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 588999999999998876554443333332222111 11232 34567888999999999999999999999
Q ss_pred HhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeec--------------ccCCC------------
Q 002430 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF--------------AKGVE------------ 359 (923)
Q Consensus 306 ~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~--------------~~~~~------------ 359 (923)
+.+|+++|+++|+++++|+||++++||||||||||+|+|+|.++..... ...+.
T Consensus 324 ~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 403 (995)
T 3ar4_A 324 TRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPI 403 (995)
T ss_dssp HHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEEC
T ss_pred HHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccc
Confidence 9999999999999999999999999999999999999999998865310 00000
Q ss_pred ----hH---HHHHHHHHHccc------------cCcchHHHHHHHhcCC-----h--h-------------hhhcCceeE
Q 002430 360 ----KE---HVILLAARASRT------------ENQDAIDAAIVGMLAD-----P--K-------------EARAGVREV 400 (923)
Q Consensus 360 ----~~---~~l~~a~~~~~~------------~~~~~~~~ai~~~~~~-----~--~-------------~~~~~~~~l 400 (923)
.+ .++..++.|+.. ..+||.|.|++.++.+ . . ..+..++++
T Consensus 404 ~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 483 (995)
T 3ar4_A 404 RSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 483 (995)
T ss_dssp CGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEE
T ss_pred cccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceE
Confidence 01 222333333221 1158999998765421 0 0 124568899
Q ss_pred EeecCCCCCcceEEEEEecCC-----cEEEEEcCcHHHHHHhccC----------ChhHHHHHHHHHHHH--HHcCCeEE
Q 002430 401 HFLPFNPVDKRTALTYIDSDG-----NWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKF--AERGLRSL 463 (923)
Q Consensus 401 ~~~~F~s~~k~~sv~~~~~~g-----~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~--a~~GlR~l 463 (923)
+.+||+|+||||+++++..+| +..+++|||||.|+++|+. +++.++.+.+.++++ +++|+|||
T Consensus 484 ~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvL 563 (995)
T 3ar4_A 484 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 563 (995)
T ss_dssp EEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred EEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEE
Confidence 999999999999999987666 5789999999999999963 245567788899999 99999999
Q ss_pred EEEeeecCCCC----------CCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002430 464 GVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (923)
Q Consensus 464 ~~A~~~~~~~~----------~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 533 (923)
++||++++..+ ++..|++++|+|+++++||+|||++++|+.|+++||+++|+|||+..||.++|+++||.
T Consensus 564 a~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~ 643 (995)
T 3ar4_A 564 ALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF 643 (995)
T ss_dssp EEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred EEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcC
Confidence 99999876432 12347899999999999999999999999999999999999999999999999999996
Q ss_pred CCCC--CCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec
Q 002430 534 TNMY--PSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611 (923)
Q Consensus 534 ~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg 611 (923)
.... ....+.|.+. +.++++++.+++.+..+|||++|+||.++|+.+|++|+.|+|+|||+||+||||+||||||||
T Consensus 644 ~~~~~i~~~~~~g~~~-~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg 722 (995)
T 3ar4_A 644 GENEEVADRAYTGREF-DDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG 722 (995)
T ss_dssp CTTCCCTTTEEEHHHH-HTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET
T ss_pred CCCCcccceEEEchhh-hhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC
Confidence 5321 1223444333 356667788889999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCCcHHHHHHHHHHhcc
Q 002430 612 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIWKFDFSPFMVLIIAILNDG 690 (923)
Q Consensus 612 ~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~-~~~~~~~~~~~il~i~l~~d~ 690 (923)
+|+|+|+++||+++++++|.+++.++++||++|+||++++.|.+++|+..++.++++. +.++.|++|+|++|+|+++|.
T Consensus 723 ~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~ 802 (995)
T 3ar4_A 723 SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDG 802 (995)
T ss_dssp TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTH
T ss_pred CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998766655544 345678999999999999997
Q ss_pred c-ccccccCCCCCC-----CC--CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cc-----ccc-ccCcc-----
Q 002430 691 T-IMTISKDRVKPS-----PQ--PDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKT--DF-----FSD-AFGVR----- 749 (923)
Q Consensus 691 ~-~~~l~~~~~~~~-----~~--p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~-----~~~-~~g~~----- 749 (923)
+ +++++++++++. |+ +++...++.+..+++.|+++++++++.|++.+.. +. ... .++..
T Consensus 803 ~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (995)
T 3ar4_A 803 LPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHP 882 (995)
T ss_dssp HHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCS
T ss_pred HHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhccccccccccc
Confidence 5 789999887543 21 1222233455556677999988887554432210 00 000 00000
Q ss_pred ccC----C--CHHHHHHHHHHHHHHHHHHHhhhhccCCCCcc---cchhHHHHHHHHHHHHHHHHHHHhhc--ccccccc
Q 002430 750 SLR----T--RPDEMMAALYLQVSIISQALIFVTRSRSWSFI---ERPGLLLATAFVIAQLVATFIAVYAN--WSFARIE 818 (923)
Q Consensus 750 ~~~----~--~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~ 818 (923)
... . .....+|++|..+++++.++.|++|+.+.+++ ...++++++++++.+++..++ +|.+ ..++.+.
T Consensus 883 ~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~ 961 (995)
T 3ar4_A 883 HFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI-LYVDPLPMIFKLK 961 (995)
T ss_dssp CCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHH-HHSTHHHHHTTCC
T ss_pred cccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHH-HHHHHHHHhhccC
Confidence 000 0 02357899999999999999999998653221 123456777766665554433 4433 1234567
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002430 819 GCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 849 (923)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~ 849 (923)
+++|..|+.+++++++++++++++|++.|++
T Consensus 962 ~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 962 ALDLTQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 7888888888899999999999999987765
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-86 Score=799.17 Aligned_cols=523 Identities=23% Similarity=0.347 Sum_probs=452.4
Q ss_pred CchhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEe-CCeEEEEeCCCCCCCcEEEEeCCCeeccceEE
Q 002430 96 PDWQDF-VGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARL 173 (923)
Q Consensus 96 ~~~~~~-~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R-dg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~l 173 (923)
..|++. ++|+++++++..++.+.++|+.+++++|+++.+++++++| ||++++|++++|+|||+|.|++||+|||||+|
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEE
Confidence 345554 4677889999999999999999999999999999999888 99999999999999999999999999999999
Q ss_pred EecCCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHH
Q 002430 174 LEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFC 252 (923)
Q Consensus 174 l~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~ 252 (923)
++| .+.||||+|||||.||.|++|+.+|+||.+.+|.+.++|++||.+|.+|||.++++++ .+++++|+.+++++.++
T Consensus 265 l~G-~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~ 343 (736)
T 3rfu_A 265 QEG-RSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWF 343 (736)
T ss_dssp CSS-CEEEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHH
T ss_pred EEC-ceEeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHH
Confidence 999 5799999999999999999999999999999999999999999999999999999877 57899999999999987
Q ss_pred HHHHHHHHHHHHHHHHhccc-cchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEE
Q 002430 253 ICSIAVGIVAEIIIMYPVQH-RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 331 (923)
Q Consensus 253 ~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i 331 (923)
+..++++.++.+++++.... ..+..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+||++|+|
T Consensus 344 v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 344 VPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEE
Confidence 76665544444444333222 24778899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcc
Q 002430 332 CSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKR 411 (923)
Q Consensus 332 ~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~ 411 (923)
|||||||||+|+|+|.++. ..+.+.++++.+++..+...+ ||++.|++.++.+ .++......+|++..++
T Consensus 424 ~fDKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~~s~-hPla~Aiv~~a~~-----~~~~~~~~~~f~~~~g~ 493 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEHQSE-HPLANAIVHAAKE-----KGLSLGSVEAFEAPTGK 493 (736)
T ss_dssp EECCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHHSSC-CHHHHHHHHHHHT-----TCCCCCCCSCCCCCTTT
T ss_pred EEeCCCCCcCCceEEEEEE----ecCCCHHHHHHHHHHHhhcCC-ChHHHHHHHHHHh-----cCCCccCcccccccCCc
Confidence 9999999999999999876 235677888888876665544 9999999987643 12333344578887776
Q ss_pred eEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccC
Q 002430 412 TALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLF 491 (923)
Q Consensus 412 ~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~ 491 (923)
.... ..+|+ .+.+|+++.+.+..... ..+.+..++++.+|+|++++|++. +++|+++++
T Consensus 494 gv~~--~~~g~--~~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i~ 552 (736)
T 3rfu_A 494 GVVG--QVDGH--HVAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLVVE 552 (736)
T ss_dssp EEEE--CSSSS--CEEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEE
T ss_pred eEEE--EECCE--EEEEcCHHHHHHcCCCh----hHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEee
Confidence 5332 33554 35679999887654332 245567788999999999999854 899999999
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
|++|++++++|++|+++|++++|+|||+..+|..+|+++||. +++++++|
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~------------------------------~v~a~~~P 602 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------------------------KVVAEIMP 602 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC------------------------------CEECSCCH
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC------------------------------EEEEecCH
Confidence 999999999999999999999999999999999999999984 26999999
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHH
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 651 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i 651 (923)
+||.++|+.+|++|+.|+|+|||.||+|||++||||||||+|+|+|+++||+|++++++..++.++++||++++||++++
T Consensus 603 ~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl 682 (736)
T 3rfu_A 603 EDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNL 682 (736)
T ss_dssp HHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh-hcCCCcHHH
Q 002430 652 IYAVSITIRIVLGFMLIALI-WKFDFSPFM 680 (923)
Q Consensus 652 ~~~~~~ni~~~~~~~~~~~~-~~~~~~~~~ 680 (923)
.|++.+|+..+....+.++. +++.++|+.
T Consensus 683 ~~a~~yN~~~iplAag~l~p~~G~~l~P~~ 712 (736)
T 3rfu_A 683 FFAFIYNVLGVPLAAGVLYPLTGLLLSPMI 712 (736)
T ss_dssp HHHHHHHHHHHHHHHTSSTTTSSCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhHHH
Confidence 99999998655543322222 344567754
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-84 Score=778.67 Aligned_cols=520 Identities=24% Similarity=0.363 Sum_probs=439.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEec
Q 002430 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (923)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 176 (923)
+|..+++++++++++..++.+.++|+++++++|++..+++++|+|||++++|+++||+|||+|.|++||+|||||+|++|
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 174 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 174 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 34456677778888888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHHH
Q 002430 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 255 (923)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~~ 255 (923)
.+.||||+|||||.|+.|++||.+|+||.+.+|.+.++|++||.+|.+||+.++++++ .+++++|+.++++..+++..
T Consensus 175 -~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 253 (645)
T 3j08_A 175 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 253 (645)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHH
T ss_pred -cEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999999887 47899999999999887666
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecC
Q 002430 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (923)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DK 335 (923)
+++..++.++.++...+.++..++..++++++++|||+|++++++++..+..+++++|+++|+++++|+||++|++||||
T Consensus 254 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 333 (645)
T 3j08_A 254 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 333 (645)
T ss_dssp HHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEG
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcC
Confidence 55544443333333334566778888999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEEE
Q 002430 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (923)
Q Consensus 336 TGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv~ 415 (923)
|||||+|+|+|.++... +.+.++++.+++.++...+ ||++.|++.++.+. +++.....+|++...+....
T Consensus 334 TGTLT~~~~~v~~~~~~----~~~~~~~l~~aa~~e~~s~-hPla~Aiv~~a~~~-----g~~~~~~~~~~~~~g~g~~~ 403 (645)
T 3j08_A 334 TGTLTKGKPEVTDLVPL----NGDERELLRLAAIAERRSE-HPIAEAIVKKALEH-----GIELGEPEKVEVIAGEGVVA 403 (645)
T ss_dssp GGTSSSSCCEEEEEEES----SSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHT-----TCCCCSCCCCEEETTTEEEE
T ss_pred cccccCCCeEEEEEEeC----CCCHHHHHHHHHHHhhcCC-ChhHHHHHHHHHhc-----CCCcCCccceEEecCCceEE
Confidence 99999999999998742 4677888888877766554 99999999876421 11111111222222221100
Q ss_pred EEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCC
Q 002430 416 YIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 495 (923)
Q Consensus 416 ~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr 495 (923)
..+.+|+++.+.+... ..++.+.+..++++.+|+|+++++++. +++|+++++|++|
T Consensus 404 --------~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~l~ 459 (645)
T 3j08_A 404 --------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 459 (645)
T ss_dssp --------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECCCT
T ss_pred --------EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEecCCch
Confidence 2356789887655322 223556777889999999999999854 8999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHH
Q 002430 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (923)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~ 575 (923)
|+++++|++|+++|++++|+|||+..+|..+|+++|+. .+|++++|+||.
T Consensus 460 ~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 509 (645)
T 3j08_A 460 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 509 (645)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC------------------------------EEEEeCCHHhHH
Confidence 99999999999999999999999999999999999984 269999999999
Q ss_pred HHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHH
Q 002430 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 655 (923)
Q Consensus 576 ~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 655 (923)
++|+.+|++ +.|+|+|||.||+|||++||||||||+|+|+++++||+++.++++..++.++++||++|+|+++++.|++
T Consensus 510 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 588 (645)
T 3j08_A 510 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 588 (645)
T ss_dssp HHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHhhcCCCcHHHHH
Q 002430 656 SITIRIVLGFMLI-ALIWKFDFSPFMVL 682 (923)
Q Consensus 656 ~~ni~~~~~~~~~-~~~~~~~~~~~~il 682 (923)
++|+..+...+.. ..++++.++|+.-.
T Consensus 589 ~~N~~~i~la~~~~~~~~g~~l~p~~a~ 616 (645)
T 3j08_A 589 IYNVILIPAAAGLLYPIFGVVFRPEFAG 616 (645)
T ss_dssp HHHHHHHHHHTTTTTTTCCCSCCHHHHH
T ss_pred HHHHHHHHHHHHhHhhhcccccCHHHHH
Confidence 9998654433222 11244567776533
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-84 Score=784.55 Aligned_cols=521 Identities=24% Similarity=0.365 Sum_probs=441.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEec
Q 002430 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (923)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 176 (923)
+|..+++++++++++..++.+.++|+++++++|+++.+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 252 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 252 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 34456667778888888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHHH
Q 002430 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 255 (923)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~~ 255 (923)
.+.||||+|||||.|+.|++||.+|+||.+.+|.+.++|++||.+|.+||+.++++++ .+++++|+.++++..+++..
T Consensus 253 -~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 331 (723)
T 3j09_A 253 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 331 (723)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHH
T ss_pred -CeEEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999999887 48899999999999887666
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecC
Q 002430 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (923)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DK 335 (923)
++++.++.++.++...+.++..++..++++++++|||+|++++++++..+..+++++|+++|+++++|+||++|+|||||
T Consensus 332 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 411 (723)
T 3j09_A 332 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 411 (723)
T ss_dssp HHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEH
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcC
Confidence 55544433333333334567788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEEE
Q 002430 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (923)
Q Consensus 336 TGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv~ 415 (923)
|||||+|+|+|.++... +.+.++++.+++.++...+ ||++.|++.++.+. +++.....+|++...+....
T Consensus 412 TGTLT~g~~~v~~~~~~----~~~~~~~l~~aa~~e~~s~-hP~~~Ai~~~a~~~-----~~~~~~~~~~~~~~g~g~~~ 481 (723)
T 3j09_A 412 TGTLTKGKPEVTDLVPL----NGDERELLRLAAIAERRSE-HPIAEAIVKKALEH-----GIELGEPEKVEVIAGEGVVA 481 (723)
T ss_dssp HHHTSCSCCEEEEEEES----SSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHT-----TCCCCSCCCCEEETTTEEEE
T ss_pred CCccccCceEEEEEEeC----CCCHHHHHHHHHHHhccCC-CchhHHHHHHHHhc-----CCCcCCccceEEecCCceEE
Confidence 99999999999998742 4567888888877766554 99999999876421 11111111222222211100
Q ss_pred EEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCC
Q 002430 416 YIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 495 (923)
Q Consensus 416 ~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr 495 (923)
..+.+|+++.+.+... +.++.+.+..++++.+|+|++++|++. +++|+++++|++|
T Consensus 482 --------~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~i~i~D~~~ 537 (723)
T 3j09_A 482 --------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 537 (723)
T ss_dssp --------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEEECCSC
T ss_pred --------EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEeecCCcc
Confidence 2356799887655322 223566778889999999999999853 8999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHH
Q 002430 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (923)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~ 575 (923)
|+++++|++|+++|++++|+|||+..+|..+|+++|+. .+|+|++|+||.
T Consensus 538 ~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 587 (723)
T 3j09_A 538 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 587 (723)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc------------------------------EEEccCCHHHHH
Confidence 99999999999999999999999999999999999984 269999999999
Q ss_pred HHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHH
Q 002430 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 655 (923)
Q Consensus 576 ~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 655 (923)
++|+.+|++ +.|+|+|||.||+|||++||||||||+|+|+|+++||+++.++++..++.++++||++|+|+++++.|++
T Consensus 588 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 666 (723)
T 3j09_A 588 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 666 (723)
T ss_dssp HHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HhhcCCCcHHHHHH
Q 002430 656 SITIRIVLGFMLIA-LIWKFDFSPFMVLI 683 (923)
Q Consensus 656 ~~ni~~~~~~~~~~-~~~~~~~~~~~il~ 683 (923)
++|+..+...+..+ .++++.++|+.-.+
T Consensus 667 ~~n~~~i~~a~~~~~~~~g~~l~p~~a~~ 695 (723)
T 3j09_A 667 IYNVILIPAAAGLLYPIFGVVFRPEFAGL 695 (723)
T ss_dssp HHHHHHHHHHHHTTSSCCCCSCCHHHHHH
T ss_pred HHHHHHHHHHHHhhhhccccccCHHHHHH
Confidence 99986544333221 12455677765433
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-34 Score=306.75 Aligned_cols=258 Identities=21% Similarity=0.334 Sum_probs=199.2
Q ss_pred HHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHH
Q 002430 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIV 384 (923)
Q Consensus 305 ~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~ 384 (923)
+..+++++|+++|+++++|.|+++++||||||||||+|+|.+.++. +.++++.+++..... +.||+..++.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~~-s~hp~a~ai~ 75 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEAL-SSHPIAKAIV 75 (263)
Confidence 4578999999999999999999999999999999999999998753 345566666555443 3489999887
Q ss_pred HhcCChhhhhcCceeEEeecCCCCCcce-EEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEE
Q 002430 385 GMLADPKEARAGVREVHFLPFNPVDKRT-ALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSL 463 (923)
Q Consensus 385 ~~~~~~~~~~~~~~~l~~~~F~s~~k~~-sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l 463 (923)
.++.+. +++......|.....+. ...+ ++ ..+..|+++ +|.+ +
T Consensus 76 ~~~~~~-----g~~~~~~~~~~~~~G~g~~~~~---~~--~~~~~G~~~-------------------------~~~~-~ 119 (263)
T 2yj3_A 76 KYAKEQ-----GVKILEVKDFKEISGIGVRGKI---SD--KIIEVKKAE-------------------------NNND-I 119 (263)
Confidence 765321 11100000010000000 0000 00 011112111 2333 4
Q ss_pred EEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCccc
Q 002430 464 GVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL 543 (923)
Q Consensus 464 ~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~ 543 (923)
.++++. .+.|.+.+.|+++|++.++|+.|++.|+++.|+|||+..++..+++++|+..
T Consensus 120 ~~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------- 177 (263)
T 2yj3_A 120 AVYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE--------- 177 (263)
Confidence 444443 7899999999999999999999999999999999999999999999999842
Q ss_pred CcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCE
Q 002430 544 GQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 623 (923)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADi 623 (923)
+|+.+.|++|..+++.++..++.|+|+|||.||++|+++|++|++++.+++.+++.||+
T Consensus 178 ---------------------~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~ 236 (263)
T 2yj3_A 178 ---------------------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADI 236 (263)
Confidence 47777799999999999999889999999999999999999999999889999999999
Q ss_pred EecCCCchhHHHHHHHhHHHHHHHHHH
Q 002430 624 VLTEPGLSVIISAVLTSRAIFQRMKNY 650 (923)
Q Consensus 624 vl~~~~~~~i~~~i~~gR~~~~~i~~~ 650 (923)
+++++++..++.++..+|+++++|++|
T Consensus 237 v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 237 ILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 999999999999999999999999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=259.81 Aligned_cols=279 Identities=28% Similarity=0.427 Sum_probs=207.8
Q ss_pred HHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHH
Q 002430 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIV 384 (923)
Q Consensus 305 ~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~ 384 (923)
|+++++++|+++|+++++|+++++++||||||||||.+++.+.++.. . .+ +.++++.+++..+.. ..||++.++.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~--~-~~-~~~~~l~~~~~~e~~-s~hp~~~a~~ 83 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVP--L-NG-DERELLRLAAIAERR-SEHPIAEAIV 83 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEE--S-SS-CHHHHHHHHHHHTTT-CCSHHHHHHH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEe--C-CC-CHHHHHHHHHHHhhc-CCCHHHHHHH
Confidence 67899999999999999999999999999999999999999987654 2 24 677888877766544 4599999988
Q ss_pred HhcCChhhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEE
Q 002430 385 GMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLG 464 (923)
Q Consensus 385 ~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~ 464 (923)
..+..........+....++ .+ .+ .. ..+.+|.++.+.+.... .++.+.+..+.+..+|.++++
T Consensus 84 ~~~~~~g~~~~~~~~~~~~~-----G~-~~--~~-----~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~i~ 147 (287)
T 3a1c_A 84 KKALEHGIELGEPEKVEVIA-----GE-GV--VA-----DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVI 147 (287)
T ss_dssp HHHHHTTCCCCCCSCEEEET-----TT-EE--EE-----TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCCccccccceeec-----CC-Ce--EE-----EEEEECCHHHHHhcCCC---ccHHHHHHHHHHHhCCCeEEE
Confidence 76531100000001111111 00 00 01 12345776654332211 112344556778889999999
Q ss_pred EEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccC
Q 002430 465 VARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 544 (923)
Q Consensus 465 ~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~ 544 (923)
+++.. .+.+.+...++++|++.++++.|++.|+++.++||++...+..+.+.+|+..
T Consensus 148 ~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------- 204 (287)
T 3a1c_A 148 VARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------- 204 (287)
T ss_dssp EEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------
T ss_pred EEECC-------------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce----------
Confidence 99864 7899999999999999999999999999999999999999999999999842
Q ss_pred cccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEE
Q 002430 545 QDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624 (923)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADiv 624 (923)
.|..+.|+.|...++.++.. ..|+|+||+.||++|.+.|++|++++++.+..+..||++
T Consensus 205 --------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v 263 (287)
T 3a1c_A 205 --------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIV 263 (287)
T ss_dssp --------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEE
T ss_pred --------------------eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEE
Confidence 36667799999999999888 889999999999999999999999987766667789999
Q ss_pred ecCCCchhHHHHHHHhHHHHHHHH
Q 002430 625 LTEPGLSVIISAVLTSRAIFQRMK 648 (923)
Q Consensus 625 l~~~~~~~i~~~i~~gR~~~~~i~ 648 (923)
+.++++..+..++..+|+++++|+
T Consensus 264 ~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 264 LIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp ESSSCTHHHHHHHHTTC-------
T ss_pred EeCCCHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999885
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-28 Score=224.54 Aligned_cols=110 Identities=27% Similarity=0.469 Sum_probs=105.7
Q ss_pred HHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCccccc
Q 002430 125 AAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSG 204 (923)
Q Consensus 125 ~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~G 204 (923)
++++|+++.+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|+ +.||||+|||||.|+.|.+||.+|+|
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-~~vdeS~LTGEs~pv~k~~g~~v~aG 80 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKGDEVFGA 80 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTTCEECTT
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-EEEEccccCCCCccEEECCCCEEEeC
Confidence 56788889999999999999999999999999999999999999999999994 89999999999999999999999999
Q ss_pred ceeecCeEEEEEEEecchhhHHhHHhhhhcc
Q 002430 205 STCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (923)
Q Consensus 205 t~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~ 235 (923)
|.+.+|.+.++|++||.+|.+|+|.++++++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999998754
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-27 Score=224.28 Aligned_cols=116 Identities=27% Similarity=0.446 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEeCCe------EEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcc
Q 002430 119 ENNAGNAAAALMANLAPKTKVLRDGR------WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLP 192 (923)
Q Consensus 119 e~~~~~~~~~l~~~~~~~~~V~Rdg~------~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~p 192 (923)
++|+.+++++|+++.+++++|+|+|+ +++|++++|+|||+|.|++||+|||||+|++|+ ..||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~-~~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH-SMVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCC-CEEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEcc-EEEEeccccCCCcc
Confidence 56888999999999999999999764 789999999999999999999999999999995 58999999999999
Q ss_pred eecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc
Q 002430 193 VTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (923)
Q Consensus 193 v~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~ 235 (923)
+.|.+|+.+|+||.+.+|.+.++|++||.+|.+|+|.++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=240.10 Aligned_cols=276 Identities=28% Similarity=0.393 Sum_probs=201.7
Q ss_pred eccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhc
Q 002430 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARA 395 (923)
Q Consensus 316 vk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 395 (923)
+|+++++|++++++.||||||||||.|+++|.++.. .. + +.++++.+++....... ++...++...+........
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~--~~-~-~~~~~~~~~~~~~~~s~-~~~~~a~~~~~~~~g~~~~ 75 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVG--FN-H-SEDELLQIAASLEARSE-HPIAAAIVEEAEKRGFGLT 75 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEE--SS-S-CHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTTCCCC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEe--cC-C-CHHHHHHHHHHhhccCC-CHHHHHHHHHHHhcCCCCC
Confidence 588999999999999999999999999999998763 22 3 67777777766554443 7777777665531110011
Q ss_pred CceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC
Q 002430 396 GVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK 475 (923)
Q Consensus 396 ~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~ 475 (923)
..+.+..++-. ..... .++. .+..|.++.+.+...... ....++..++.+.+.+++..
T Consensus 76 ~~~~~~~~~g~----~~~~~---~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------ 133 (280)
T 3skx_A 76 EVEEFRAIPGK----GVEGI---VNGR--RYMVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG------ 133 (280)
T ss_dssp CCEEEEEETTT----EEEEE---ETTE--EEEEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT------
T ss_pred CccceeecCCC----EEEEE---ECCE--EEEEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC------
Confidence 11222222211 11111 1332 334577777655433211 23445677888988888754
Q ss_pred CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcch
Q 002430 476 ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALP 555 (923)
Q Consensus 476 ~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~ 555 (923)
.++|.+.+.|+++|++.++++.|++.|+++.++||++...+..+.+++|+..
T Consensus 134 -------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------- 185 (280)
T 3skx_A 134 -------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD--------------------- 185 (280)
T ss_dssp -------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------
T ss_pred -------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh---------------------
Confidence 7899999999999999999999999999999999999999999999999842
Q ss_pred HHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHH
Q 002430 556 VDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 556 ~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~ 635 (923)
.|..+.|.+|...++.+.+..+ ++|+||+.||++|++.|++|++|+++++.++++||+++..+++..+..
T Consensus 186 ---------~f~~~~~~~k~~~~k~~~~~~~-~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~ 255 (280)
T 3skx_A 186 ---------YFAEVLPHEKAEKVKEVQQKYV-TAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAA 255 (280)
T ss_dssp ---------EECSCCGGGHHHHHHHHHTTSC-EEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHH
T ss_pred ---------HhHhcCHHHHHHHHHHHHhcCC-EEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHH
Confidence 4777889999999999988764 689999999999999999999999988889999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHH
Q 002430 636 AVLTSRAIFQRMKNYTIYAVS 656 (923)
Q Consensus 636 ~i~~gR~~~~~i~~~i~~~~~ 656 (923)
+++.+|++++++++++.|++.
T Consensus 256 ~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 256 IVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998764
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-24 Score=236.73 Aligned_cols=146 Identities=12% Similarity=0.017 Sum_probs=116.2
Q ss_pred ccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHh--hhcCeE
Q 002430 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELI--EKADGF 566 (923)
Q Consensus 489 ~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~vf 566 (923)
...+++||+++++++.|+++|++++|+|||...++.++++++|+..... .+..... ..++..+.... +..+++
T Consensus 137 ~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~---~i~~n~l--~~~~~~~~~~~~~~~i~~~ 211 (297)
T 4fe3_A 137 DSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV---KVVSNFM--DFDENGVLKGFKGELIHVF 211 (297)
T ss_dssp TSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTE---EEEEECE--EECTTSBEEEECSSCCCTT
T ss_pred hcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccc---eEEeeeE--EEcccceeEeccccccchh
Confidence 3468999999999999999999999999999999999999999864310 0100000 00111000000 123468
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhh---cCCeeeEec-------cchHHHhhccCEEecCCCchhHHHH
Q 002430 567 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK---KADIGIAVA-------DATDAARSASDIVLTEPGLSVIISA 636 (923)
Q Consensus 567 ar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk---~AdVGIamg-------~gtd~A~~aADivl~~~~~~~i~~~ 636 (923)
++..|.+|...+..+++.++.|+|+|||+||+||++ +|||||+|| +++|++++++||||++|++..++.+
T Consensus 212 ~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~ 291 (297)
T 4fe3_A 212 NKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 291 (297)
T ss_dssp CHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred hcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHH
Confidence 888999999999999999999999999999999954 999999999 8999999999999999999999998
Q ss_pred HHH
Q 002430 637 VLT 639 (923)
Q Consensus 637 i~~ 639 (923)
|.+
T Consensus 292 il~ 294 (297)
T 4fe3_A 292 ILQ 294 (297)
T ss_dssp HHH
T ss_pred HHH
Confidence 854
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.5e-19 Score=175.28 Aligned_cols=139 Identities=21% Similarity=0.365 Sum_probs=117.5
Q ss_pred cCCChHHHHHHHHHHc--cccCcchHHHHHHHhcCCh--hhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcH
Q 002430 356 KGVEKEHVILLAARAS--RTENQDAIDAAIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAP 431 (923)
Q Consensus 356 ~~~~~~~~l~~a~~~~--~~~~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~ 431 (923)
.|.+.++++.+|+.++ ....+||+|.|++.++... ...+..|+.++++||+|.+|||++++++.+|+..+++||||
T Consensus 11 ~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGAp 90 (170)
T 3gwi_A 11 SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90 (170)
T ss_dssp TSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCc
Confidence 4778899999999988 4456799999999887532 23457799999999999999999999877788899999999
Q ss_pred HHHHHhccC----------ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCC---CCCCCCCceEEEEeccCCCC
Q 002430 432 EQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT---KESPGAPWQLVGLLPLFDPP 494 (923)
Q Consensus 432 e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~---~~~~e~~l~llG~i~i~D~l 494 (923)
|.|+++|+. +++.++.+.+.+++|+++|+|||++|++.++..+ ....|++|+|+|+++|-|.-
T Consensus 91 E~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~~ 166 (170)
T 3gwi_A 91 QEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHH 166 (170)
T ss_dssp HHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC--
T ss_pred HHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhcccccc
Confidence 999999973 4566788999999999999999999999987543 23469999999999998853
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.38 E-value=3e-13 Score=137.38 Aligned_cols=126 Identities=21% Similarity=0.350 Sum_probs=106.7
Q ss_pred HHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHH
Q 002430 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (923)
Q Consensus 501 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 580 (923)
+|+.|+++|+++.++||++...+..+++++|+.. .|... .+|...++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~------------------------------~f~~~--~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH------------------------------LFQGR--EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE------------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH------------------------------HhcCc--CChHHHHHH
Confidence 9999999999999999999999999999999842 12222 667777776
Q ss_pred HhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCC----chhHHHHHHHhHHHHHHHHHHHH
Q 002430 581 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRMKNYTI 652 (923)
Q Consensus 581 lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~----~~~i~~~i~~gR~~~~~i~~~i~ 652 (923)
+.++ ...|+|+||+.||.+|++.|++|++++++.+.+++.||+++.+++ +..+.+.+..+|..++++++++.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTS
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHh
Confidence 6654 467999999999999999999999999899999999999998763 67788888899999999999999
Q ss_pred HHHHHH
Q 002430 653 YAVSIT 658 (923)
Q Consensus 653 ~~~~~n 658 (923)
|.+.+|
T Consensus 182 ~~~~~~ 187 (189)
T 3mn1_A 182 EGHHHH 187 (189)
T ss_dssp TTC---
T ss_pred cccccc
Confidence 988766
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.25 E-value=5.5e-12 Score=140.05 Aligned_cols=156 Identities=13% Similarity=0.126 Sum_probs=110.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
+++|++.+.++.|+++|+++.|+||+....+..+.+++|+..- ... .+.- .+...++. +.....+++..|+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~-~~~-~l~~--~d~~~tg~-----~~~~~~~~kpk~~ 248 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYA-QSN-TLEI--VSGKLTGQ-----VLGEVVSAQTKAD 248 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEE-EEE-EEEE--ETTEEEEE-----EESCCCCHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeE-Eee-eeEe--eCCeeeee-----ecccccChhhhHH
Confidence 7899999999999999999999999999999999999998421 000 0000 00000000 0000011123344
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 652 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~ 652 (923)
...++.+.++-....|.|+|||.||.+|++.|++|++| ++.+..++.||.++..+++..++.++.......++++.|+.
T Consensus 249 ~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~ 327 (335)
T 3n28_A 249 ILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSK 327 (335)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--
T ss_pred HHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccc
Confidence 44555555554556799999999999999999999999 88899999999999999999999999888887888999998
Q ss_pred HHHHHH
Q 002430 653 YAVSIT 658 (923)
Q Consensus 653 ~~~~~n 658 (923)
+++.+|
T Consensus 328 ~~~~~~ 333 (335)
T 3n28_A 328 EGHHHH 333 (335)
T ss_dssp ------
T ss_pred cccccc
Confidence 888766
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=8.9e-11 Score=118.00 Aligned_cols=132 Identities=20% Similarity=0.226 Sum_probs=104.4
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhH
Q 002430 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (923)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K 574 (923)
.++..++|+.|++.|+++.++||++...+..+.+++|+... |.. ...|
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~------------------------------~~~--~k~k 84 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF------------------------------FLG--KLEK 84 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE------------------------------EES--CSCH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCcee------------------------------ecC--CCCc
Confidence 34677999999999999999999999999999999998521 221 2456
Q ss_pred HHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHH----HHHHHhHHHHHH
Q 002430 575 YEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII----SAVLTSRAIFQR 646 (923)
Q Consensus 575 ~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~----~~i~~gR~~~~~ 646 (923)
...++.+.++ | ..|+|+||+.||++|++.|+++++++++.+..++.||+++.+++...++ +.+...|..|++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~ 164 (180)
T 1k1e_A 85 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 164 (180)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhh
Confidence 6666655433 4 5699999999999999999999999988888999999999887655444 444556777888
Q ss_pred HHHHHHHHHHHH
Q 002430 647 MKNYTIYAVSIT 658 (923)
Q Consensus 647 i~~~i~~~~~~n 658 (923)
++..+-|+.+.+
T Consensus 165 ~~~~~~~~~~~~ 176 (180)
T 1k1e_A 165 FDTAQGFLKSVK 176 (180)
T ss_dssp HHCHHHHHHHGG
T ss_pred hhhccchhhhhc
Confidence 888888776643
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.12 E-value=2e-11 Score=124.38 Aligned_cols=111 Identities=21% Similarity=0.346 Sum_probs=87.2
Q ss_pred HHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHH
Q 002430 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (923)
Q Consensus 500 ~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~ 579 (923)
.+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~------------------------------~~~~~--k~k~~~~~ 106 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL------------------------------IYQGQ--DDKVQAYY 106 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE------------------------------EECSC--SSHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE------------------------------EeeCC--CCcHHHHH
Confidence 35999999999999999999999999999999852 12222 45666655
Q ss_pred HHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchh----HHHHHHHhHH
Q 002430 580 RLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVLTSRA 642 (923)
Q Consensus 580 ~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~----i~~~i~~gR~ 642 (923)
.+.++ ...|+|+||+.||.+|++.|+++++|+++.+.+++.||+++.+++-.. +.+.+...|.
T Consensus 107 ~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~ 177 (195)
T 3n07_A 107 DICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAVREVCDLILQARN 177 (195)
T ss_dssp HHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred HHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcc
Confidence 55442 356899999999999999999999999999999999999998765333 4444444433
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.12 E-value=9.7e-11 Score=119.02 Aligned_cols=124 Identities=18% Similarity=0.246 Sum_probs=100.0
Q ss_pred HHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEec--ChhhHHHHH
Q 002430 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV--FPEHKYEIV 578 (923)
Q Consensus 501 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~--sP~~K~~iV 578 (923)
+|+.|+++|+++.++||+....+..+.+++|+..- |..+ .|+-...+.
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~------------------------------~~~~kpk~~~~~~~~ 103 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHY------------------------------YKGQVDKRSAYQHLK 103 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEE------------------------------ECSCSSCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccc------------------------------eeCCCChHHHHHHHH
Confidence 49999999999999999999999999999998531 2222 345555566
Q ss_pred HHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCC----chhHHHHHHHhHHHHHHHHHHHHHH
Q 002430 579 KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRMKNYTIYA 654 (923)
Q Consensus 579 ~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~----~~~i~~~i~~gR~~~~~i~~~i~~~ 654 (923)
+.++-....|+|+||+.||.+|++.|+++++++++.+..+..||+++.+++ +..+.+.+...|..|+++.++..|+
T Consensus 104 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~~ 183 (191)
T 3n1u_A 104 KTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLKQ 183 (191)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHhc
Confidence 666555567999999999999999999999999888999999999998877 5556666667777888877766653
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.04 E-value=3e-10 Score=117.16 Aligned_cols=97 Identities=23% Similarity=0.328 Sum_probs=83.9
Q ss_pred HHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHH
Q 002430 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (923)
Q Consensus 501 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 580 (923)
+++.|+++|+++.++||++...+..+++++|+.. +|..+ ..|...++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~------------------------------~f~~~--k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH------------------------------LYQGQ--SDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch------------------------------hhccc--CChHHHHHH
Confidence 9999999999999999999999999999999842 23333 567777776
Q ss_pred HhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCC
Q 002430 581 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (923)
Q Consensus 581 lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~ 629 (923)
+.++ ...|+|+||+.||.+|++.|+++++++++.+.+++.||+++.+++
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~ 184 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKG 184 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCT
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCC
Confidence 6654 567999999999999999999999999888899999999998774
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.04 E-value=5.3e-10 Score=116.79 Aligned_cols=148 Identities=21% Similarity=0.127 Sum_probs=105.3
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCC--CCcc---cCccc-c-cc-------------
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSSL---LGQDK-D-AS------------- 550 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~--~~~l---~~~~~-~-~~------------- 550 (923)
..++.+++.++|++|++.|+++.++||+....+..+++++|+...... ...+ .+... . ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 345788999999999999999999999999999999999998531100 0000 01100 0 00
Q ss_pred ----------------------cCcchHHHHhhh--cCe-----EEecCh--hhHHHHHHHHhhC-C---CEEEEEcCCc
Q 002430 551 ----------------------IAALPVDELIEK--ADG-----FAGVFP--EHKYEIVKRLQER-K---HICGMTGDGV 595 (923)
Q Consensus 551 ----------------------~~~~~~~~~~~~--~~v-----far~sP--~~K~~iV~~lq~~-g---~~V~m~GDG~ 595 (923)
.+.+.++++.+. ..+ +-.+.| .+|...++.+.+. | ..|.++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 001112222221 111 234446 6899998888764 2 4589999999
Q ss_pred cChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 596 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 596 NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
||.+|++.|++|++|+++.+..++.||+++.+++-..+..+++
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999999999999999998888888887774
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.03 E-value=4.2e-10 Score=111.63 Aligned_cols=109 Identities=20% Similarity=0.183 Sum_probs=86.4
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHH--HhCCCCCCCCCCcccCcccccccCcchHHHHh
Q 002430 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR--RLGMGTNMYPSSSLLGQDKDASIAALPVDELI 560 (923)
Q Consensus 483 ~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~--~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 560 (923)
+.++.+.++|. .+|+.|++.|+++.++||+ ..+..+++ .+|+. .
T Consensus 32 ~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~--~------------------------ 77 (168)
T 3ewi_A 32 KEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK--T------------------------ 77 (168)
T ss_dssp CCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC--E------------------------
T ss_pred CEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE--E------------------------
Confidence 45666776666 3899999999999999999 56777888 45542 1
Q ss_pred hhcCeEEecChhhHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchh
Q 002430 561 EKADGFAGVFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 632 (923)
Q Consensus 561 ~~~~vfar~sP~~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~ 632 (923)
|. .+++|...++.+.++ ...|+|+||+.||.+|++.|+++++|+++.+.+++.||+|+.+++=..
T Consensus 78 -----~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~v~~~~~~~G 146 (168)
T 3ewi_A 78 -----EV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKCSGGRG 146 (168)
T ss_dssp -----EC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCSEECSSCTTTT
T ss_pred -----EE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCCEEeCCCCCcc
Confidence 11 135688777776654 356899999999999999999999999999999999999998765444
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.02 E-value=8.7e-10 Score=110.36 Aligned_cols=104 Identities=25% Similarity=0.333 Sum_probs=87.0
Q ss_pred HHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHH
Q 002430 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (923)
Q Consensus 501 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 580 (923)
+++.|+++|+++.++||+....+..+++++|+. . |+.. ..|...++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--~-----------------------------~~~~--~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--V-----------------------------LHGI--DRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--E-----------------------------EESC--SCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--e-----------------------------EeCC--CChHHHHHH
Confidence 999999999999999999999999999999984 1 2222 557777666
Q ss_pred HhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHH
Q 002430 581 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 581 lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
+.++ ...|.|+||+.||.+|++.|++|++++++.+.+++.||+++.+++...++..+
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 6543 35689999999999999999999999988899999999999988866655544
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=2.6e-09 Score=103.92 Aligned_cols=140 Identities=19% Similarity=0.267 Sum_probs=95.2
Q ss_pred CCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCCh-hhhhcCce--eEEeecCCCCCcc
Q 002430 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADP-KEARAGVR--EVHFLPFNPVDKR 411 (923)
Q Consensus 335 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~-~~~~~~~~--~l~~~~F~s~~k~ 411 (923)
..||+|-|...+.++.. ..+.+.++++.+|+.++..+. ||++.||+.++... .......+ ..++.+|++..++
T Consensus 13 ~~~tit~gnr~vt~v~~---~~g~~e~elL~lAAs~E~~Se-HPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIP---AQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEEE---CTTSCHHHHHHHHHHTTSSCC-SHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEEe---cCCCCHHHHHHHHHHHhCcCC-CHHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 47999999999998753 246788999999988875554 99999999877422 10000110 2345789988886
Q ss_pred eEEEEEecCCcEEEEEcCcHHHHHHhccCC-hhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEecc
Q 002430 412 TALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPL 490 (923)
Q Consensus 412 ~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i 490 (923)
..+.+ +| ..+.+|+++.|.+++... ....+.+.+.+++++++|.++++||... +++|++++
T Consensus 89 ~Gv~v---~G--~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TT--EEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CC--EEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 66643 67 468899988776665421 1223356778889999999999999754 89999999
Q ss_pred CCCCCc
Q 002430 491 FDPPRH 496 (923)
Q Consensus 491 ~D~lr~ 496 (923)
.|++||
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999997
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=2.1e-09 Score=105.83 Aligned_cols=100 Identities=29% Similarity=0.320 Sum_probs=81.6
Q ss_pred HHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHH
Q 002430 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (923)
Q Consensus 501 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 580 (923)
+++.|++.|+++.++||++...+..+.+++|+... |... ..|...++.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~------------------------------~~~~--kpk~~~~~~ 86 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL------------------------------FQGV--VDKLSAAEE 86 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE------------------------------ECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe------------------------------eccc--CChHHHHHH
Confidence 89999999999999999999999999999998531 1112 334444444
Q ss_pred Hhh----CCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchh
Q 002430 581 LQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 632 (923)
Q Consensus 581 lq~----~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~ 632 (923)
+.+ ....|.|+||+.||.+|++.|+++++++++.+..++.||+++.+++...
T Consensus 87 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g 142 (164)
T 3e8m_A 87 LCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEG 142 (164)
T ss_dssp HHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTT
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCc
Confidence 433 2356999999999999999999999999899999999999999888444
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.86 E-value=3.5e-10 Score=125.32 Aligned_cols=166 Identities=14% Similarity=0.125 Sum_probs=110.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCccc--------------ccccCc---ch
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK--------------DASIAA---LP 555 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~--------------~~~~~~---~~ 555 (923)
++++++.+.++.|++ |+.+.++|||....+..+.+.+|+..... ...+..... +..+.. ++
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELH-GTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEE-EEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhc-ccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 568999999999999 99999999999777777777777632110 000000000 000000 11
Q ss_pred HHHHhhhc------CeEE---e-cChhhHHHHHHHHhhCC--CEEEEEcCCccChHhhhcC----CeeeEeccchHHHhh
Q 002430 556 VDELIEKA------DGFA---G-VFPEHKYEIVKRLQERK--HICGMTGDGVNDAPALKKA----DIGIAVADATDAARS 619 (923)
Q Consensus 556 ~~~~~~~~------~vfa---r-~sP~~K~~iV~~lq~~g--~~V~m~GDG~NDapaLk~A----dVGIamg~gtd~A~~ 619 (923)
+ +.+.+. ..+. - ..+.+|...++.++... +.|+++|||.||++|++.| ++|||| ++.+.+++
T Consensus 181 l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~ 258 (332)
T 1y8a_A 181 F-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALK 258 (332)
T ss_dssp H-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHT
T ss_pred H-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHh
Confidence 1 111100 0011 1 12567988888776543 6699999999999999999 999999 99999999
Q ss_pred ccCEEecCCCchhHHHHH----HHhHHHHHHHHH-------HHHHHHHHHHHHHH
Q 002430 620 ASDIVLTEPGLSVIISAV----LTSRAIFQRMKN-------YTIYAVSITIRIVL 663 (923)
Q Consensus 620 aADivl~~~~~~~i~~~i----~~gR~~~~~i~~-------~i~~~~~~ni~~~~ 663 (923)
+||+|+.+++...+..++ ..||..+ ++-+ ++.+..+.|+..++
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF-EVLSAVSIPETEIYIMENSDFGEVL 312 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGGGCCCTTCEEEEGGGSCHHHHH
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHHhhccCCCceEEecCCCHHHHH
Confidence 999999988887666554 5688777 6555 55555555655443
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.80 E-value=9.2e-09 Score=117.50 Aligned_cols=137 Identities=21% Similarity=0.223 Sum_probs=105.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe----
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG---- 568 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar---- 568 (923)
+++||+.+.++.|++.|+++.++||.....+..+.+++|+.... . ..+.- .+ ..+.++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~-~-~~l~~--~d--------------g~~tg~~~~~ 317 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVA-A-NELEI--VD--------------GTLTGRVVGP 317 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEE-E-ECEEE--ET--------------TEEEEEECSS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCcccee-e-eeEEE--eC--------------CEEEeeEccC
Confidence 68999999999999999999999999999999999999985211 0 00000 00 001111
Q ss_pred -cChhhHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHH
Q 002430 569 -VFPEHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 643 (923)
Q Consensus 569 -~sP~~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~ 643 (923)
..+..|.++++.+.++ | ..|.|+|||.||.+|++.|++|+++ ++.+..++.||+++..+++..++.++..+|.-
T Consensus 318 v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 318 IIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 1256777777766543 3 4689999999999999999999999 67777888999999999999999999888877
Q ss_pred HHHHH
Q 002430 644 FQRMK 648 (923)
Q Consensus 644 ~~~i~ 648 (923)
+.+.-
T Consensus 397 ~~~~~ 401 (415)
T 3p96_A 397 IEAAD 401 (415)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 65543
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.74 E-value=1.6e-08 Score=103.68 Aligned_cols=132 Identities=22% Similarity=0.283 Sum_probs=95.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe--c
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--V 569 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar--~ 569 (923)
-+++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... . ..+. .+.. ...+ .+.. .
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-~-~~~~-~~~~-~~~~-----------~~~~~~~ 138 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF-S-NTLI-VEND-ALNG-----------LVTGHMM 138 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE-E-EEEE-EETT-EEEE-----------EEEESCC
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc-c-ceeE-EeCC-EEEe-----------eeccCCC
Confidence 458899999999999999999999999999999999999985311 0 0000 0000 0000 0011 1
Q ss_pred ChhhHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHH
Q 002430 570 FPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 570 sP~~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~ 639 (923)
.+..|.++++.+.++ ...|.|+||+.||.+|++.|+++++| ++.+..++.||+++.+++|..+..++.+
T Consensus 139 ~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 139 FSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp STTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 245566666655443 34588999999999999999999999 6777888999999999999999888743
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.67 E-value=2.3e-08 Score=109.76 Aligned_cols=131 Identities=16% Similarity=0.149 Sum_probs=94.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE-ecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA-GVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa-r~sP 571 (923)
+++||+.+.++.|++.|+++.++||.....+..+.+++|+.... . ..+... +....+. +.. -..+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f-~-~~l~~~--dg~~tg~----------i~~~~~~~ 244 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAF-S-NTVEIR--DNVLTDN----------ITLPIMNA 244 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEE-E-ECEEEE--TTEEEEE----------ECSSCCCH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEE-E-EEEEee--CCeeeee----------EecccCCC
Confidence 48899999999999999999999999999999999999985311 0 010000 0000000 000 0123
Q ss_pred hhHHHHHHHHhh----CCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 572 EHKYEIVKRLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 572 ~~K~~iV~~lq~----~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
..|.++++.+.+ ....|.|+||+.||.+|++.|++|+++ ++.+..++.||.++..+++..++.+++
T Consensus 245 kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 245 ANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 556666555433 235689999999999999999999999 466777889999999899998877653
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=6.5e-08 Score=97.66 Aligned_cols=105 Identities=26% Similarity=0.345 Sum_probs=82.6
Q ss_pred HHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHH
Q 002430 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (923)
Q Consensus 501 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 580 (923)
+|+.|++.|+++.++||+....+..+.+++|+..- |.. ...|...++.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~------------------------------~~~--~kpk~~~~~~ 108 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL------------------------------YQG--QSNKLIAFSD 108 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE------------------------------ECS--CSCSHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee------------------------------ecC--CCCCHHHHHH
Confidence 89999999999999999999999999999998521 111 1334445544
Q ss_pred HhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHH-HHH
Q 002430 581 LQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII-SAV 637 (923)
Q Consensus 581 lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~-~~i 637 (923)
+.++ | ..|+|+||+.||.++++.|+++++++++.+..++.||+++.+++-..++ .++
T Consensus 109 ~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l 170 (188)
T 2r8e_A 109 LLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 170 (188)
T ss_dssp HHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHH
Confidence 4332 3 5689999999999999999999999877777788999999887655555 444
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.62 E-value=1.1e-07 Score=101.96 Aligned_cols=71 Identities=24% Similarity=0.317 Sum_probs=59.5
Q ss_pred ecChh--hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 568 GVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 568 r~sP~--~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.+.|. .|...++.+.++ | .-|+++||+.||.+|++.|++|+||+++.+..+++||+|..+++=..+..+|+
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIE 266 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHH
Confidence 44554 787777776653 3 35899999999999999999999999999999999999998877778887775
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.60 E-value=2.1e-08 Score=101.12 Aligned_cols=118 Identities=22% Similarity=0.284 Sum_probs=88.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+..- ...+...+. . . .-....|.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~---~~~~~~~~~--~------------~-~~~~~~~~ 139 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM---ANRAIFEDG--K------------F-QGIRLRFR 139 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE---EEEEEEETT--E------------E-EEEECCSS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh---eeeEEeeCC--c------------e-ECCcCCcc
Confidence 7899999999999999999999999998887777 77776321 000000000 0 0 01345678
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
+|...++.+ ....|.|+||+.||.+|++.|++|++|+++.+ .||+++. ++..+...+
T Consensus 140 ~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~~--~~~el~~~l 196 (201)
T 4ap9_A 140 DKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLVK--DLKELVDFI 196 (201)
T ss_dssp CHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEES--SHHHHHHHH
T ss_pred CHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEEc--cHHHHHHHH
Confidence 899999988 44568899999999999999999999987665 8999984 566666655
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=8.5e-08 Score=97.40 Aligned_cols=128 Identities=23% Similarity=0.344 Sum_probs=88.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe-cCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar-~sP 571 (923)
++.|++.++++.|++.|+++.++||+....+..+.+.+|+... ........ +....+ .+... +.+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~----------~~~~~~~~~ 141 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVK---DGKLTG----------DVEGEVLKE 141 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEE---TTEEEE----------EEECSSCST
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEE---CCEEcC----------CcccCccCC
Confidence 4678999999999999999999999998888888888887421 00000000 000000 00001 224
Q ss_pred hhHHHHHHHHhh-CC---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHH
Q 002430 572 EHKYEIVKRLQE-RK---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 572 ~~K~~iV~~lq~-~g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~ 635 (923)
..|...+..+.+ .| ..|.|+||+.||.+|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 577666655543 23 34899999999999999999999998 55666788999998767776653
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.54 E-value=2.2e-07 Score=91.00 Aligned_cols=110 Identities=20% Similarity=0.277 Sum_probs=84.8
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh--h
Q 002430 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP--E 572 (923)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP--~ 572 (923)
.+++.++++.|++.|+++.++||.....+..+.+++|+... |....| +
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~------------------------------~~~~kp~~~ 87 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEI------------------------------YTGSYKKLE 87 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEE------------------------------EECC--CHH
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhh------------------------------ccCCCCCHH
Confidence 46788999999999999999999999999999999997421 111112 2
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 634 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~ 634 (923)
--..+.+.+.-....+.|+||+.||.++.+.|++++++.++.+..++.||+++.+.+-..++
T Consensus 88 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 88 IYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 22233333333345689999999999999999999999877777888999999887766666
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.53 E-value=4.7e-07 Score=97.57 Aligned_cols=68 Identities=15% Similarity=0.143 Sum_probs=57.8
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHH
Q 002430 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 572 ~~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~ 639 (923)
..|...++.+.+. | .-|+++||+.||.+|++.|++|+||+++.+..+++||+|..+++=..+..+++.
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 4588777777654 3 358999999999999999999999999999999999999988777788888753
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.46 E-value=2.5e-07 Score=99.10 Aligned_cols=66 Identities=23% Similarity=0.259 Sum_probs=46.7
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.|..-++.+.+. | .-|.++||+.||.+|++.|++|+||++|.+..|++||+|..+++=..+..+|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 488877776654 3 35899999999999999999999999999999999999988777777777764
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.43 E-value=1e-06 Score=89.52 Aligned_cols=128 Identities=15% Similarity=0.131 Sum_probs=94.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++. +++.++|+.....+..+.+++|+.... ......+.+.. ....-.-.|+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f-~~~~~~~~~~~--------------~~~~~~p~p~ 132 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLL-CHKLEIDDSDR--------------VVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEE-EEEEEECTTSC--------------EEEEECCSSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCccee-cceeEEcCCce--------------EEeeecCCCc
Confidence 5789999999999999 999999999999999999999985311 00011110000 0001124688
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
.|...++.+......|.|+||+.||.+|.+.|++++++....+....+++++. -+++..+...+
T Consensus 133 ~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l 196 (206)
T 1rku_A 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA-VHTYEDLKREF 196 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCE-ECSHHHHHHHH
T ss_pred hHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhcc-ccchHHHHHHH
Confidence 99999999988888999999999999999999999998654444444556542 25677777665
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.41 E-value=7.1e-07 Score=94.52 Aligned_cols=66 Identities=24% Similarity=0.289 Sum_probs=55.1
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.|..-++.+.+. ..-|.++||+.||.+|++.|++|+||+++.+..|+.||+|..+++-..+..+++
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 465556665542 245899999999999999999999999999999999999998877778888775
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.41 E-value=3.3e-07 Score=93.29 Aligned_cols=130 Identities=14% Similarity=0.093 Sum_probs=88.4
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCC-CCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN-MYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++|++.+.++.|++.|+++.++|+.....+..+.+.+|+... .+........+.. +. ........|.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~ 150 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS-------FK-----ELDNSNGACD 150 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB-------EE-----EEECTTSTTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc-------ee-----ccCCCCCCcc
Confidence 789999999999999999999999999999999999998531 1110010000000 00 0001233566
Q ss_pred hHHHHHHHH-hhCCCEEEEEcCCccChHhhhc--CCeeeEe--ccchHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRL-QERKHICGMTGDGVNDAPALKK--ADIGIAV--ADATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~l-q~~g~~V~m~GDG~NDapaLk~--AdVGIam--g~gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
.|.+.+..+ .-....+.|+||+.||.+|++. +.+|+++ +++.+..+..||+++ +++..+...+
T Consensus 151 ~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~--~~~~el~~~l 218 (219)
T 3kd3_A 151 SKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVA--RNVAELASLI 218 (219)
T ss_dssp CHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEE--SSHHHHHHHH
T ss_pred cHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceee--CCHHHHHHhh
Confidence 777777655 4456789999999999999975 3345554 466677788899998 4566665543
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.41 E-value=6e-07 Score=93.63 Aligned_cols=146 Identities=22% Similarity=0.243 Sum_probs=99.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCC--cc-c-Ccc------------------cc--
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS--SL-L-GQD------------------KD-- 548 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~--~l-~-~~~------------------~~-- 548 (923)
.+.+.+.++++++++.|+++.++||.....+..+.+.+|+........ .+ . +.. ..
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~~ 99 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 99 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCCC
Confidence 467889999999999999999999999999999999999753110000 00 0 000 00
Q ss_pred cc------------------cCcchHHHHhhh----cCeE-----EecCh--hhHHHHHHHHhhC-C---CEEEEEcCCc
Q 002430 549 AS------------------IAALPVDELIEK----ADGF-----AGVFP--EHKYEIVKRLQER-K---HICGMTGDGV 595 (923)
Q Consensus 549 ~~------------------~~~~~~~~~~~~----~~vf-----ar~sP--~~K~~iV~~lq~~-g---~~V~m~GDG~ 595 (923)
.. .+.+.+.+++++ .++. ..+.| ..|...++.+.++ | ..|.|+||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~ 179 (231)
T 1wr8_A 100 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 179 (231)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 00 011222333322 1222 23334 3688888777653 2 4588999999
Q ss_pred cChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 596 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 596 NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
||.+|++.|++|++|+++.+..++.||+++.+++-..+..+++
T Consensus 180 nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 180 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 9999999999999999888888889999987766666766664
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.40 E-value=5.5e-07 Score=96.97 Aligned_cols=66 Identities=23% Similarity=0.246 Sum_probs=57.4
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.|..-++.+.+. | .-|+++||+.||.+|++.|++||||++|.+..|++||+|..+++=..+..+++
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 588888877654 3 34899999999999999999999999999999999999998887778887774
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.37 E-value=6.1e-07 Score=95.62 Aligned_cols=67 Identities=25% Similarity=0.301 Sum_probs=57.1
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHH
Q 002430 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 573 ~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~ 639 (923)
.|..-++.+.+. ..-|.++||+.||.+|++.|++|+||+++.+..+++||+|..+++=..+..++++
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 587777766543 3458999999999999999999999999999999999999988887788887753
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.1e-06 Score=94.78 Aligned_cols=67 Identities=21% Similarity=0.207 Sum_probs=55.1
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCE--EecCCCchhHHHHHH
Q 002430 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 638 (923)
Q Consensus 572 ~~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADi--vl~~~~~~~i~~~i~ 638 (923)
..|..-++.+.+. | .-|+++||+.||.+|++.|++||||++|.+..|++||+ +..+++=..+..+++
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 4588888877653 3 35899999999999999999999999999999999984 666666667777764
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.35 E-value=5.9e-07 Score=93.17 Aligned_cols=128 Identities=19% Similarity=0.242 Sum_probs=90.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+... ....-.|+
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 164 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL--TVIAGDDSV-----------------ERGKPHPD 164 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC--SEEECTTTS-----------------SSCTTSSH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe--eeEEeCCCC-----------------CCCCCCHH
Confidence 46799999999999999999999999999999999999975321 111111000 00111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe---eeEeccch-HHHhh-ccCEEecCCCchhHHHHHHHhH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI---GIAVADAT-DAARS-ASDIVLTEPGLSVIISAVLTSR 641 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV---GIamg~gt-d~A~~-aADivl~~~~~~~i~~~i~~gR 641 (923)
--..+.+.+.-....|.|+||+.||..|++.|++ +|++|.+. +..+. .||+++ +++..+...++.++
T Consensus 165 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 165 MALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHccC
Confidence 3344555555445568999999999999999999 88888433 44443 799998 67888888887654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=2.1e-07 Score=94.64 Aligned_cols=129 Identities=14% Similarity=0.148 Sum_probs=91.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... +...+.+.+.. ...-.|+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-~~~~i~~~~~~-----------------~~kp~~~ 131 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCF-AEADVLGRDEA-----------------PPKPHPG 131 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGS-CGGGEECTTTS-----------------CCTTSSH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhc-CcceEEeCCCC-----------------CCCCCHH
Confidence 35689999999999999999999999999999999999974311 10111111100 1111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEeccchHHHhhccCEEecCCCchhHHHHHHHhH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 641 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR 641 (923)
--..+.+.+.-....|.|+||+.||..|.+.|++ +|+|+++.+..++.||+++ +++..++..+...|
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~~ 199 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAEG 199 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhcc
Confidence 2233444443334568999999999999999999 9999877666677899998 57888888876443
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.26 E-value=6.1e-07 Score=92.60 Aligned_cols=127 Identities=18% Similarity=0.190 Sum_probs=85.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC-CCCCCCcccCcccccccCcchHHHHhhhcCeEEe---
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar--- 568 (923)
++.|++.++++.|++.|+++.++|+.....+..+.+++|+.. +.+... +.- .. ...+.+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~-~~~-~~--------------~~~~~~~~~~ 149 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANR-LKF-YF--------------NGEYAGFDET 149 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEEC-EEE-CT--------------TSCEEEECTT
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeee-EEE-cC--------------CCcEecCCCC
Confidence 688999999999999999999999999999999999999853 111100 000 00 0000111
Q ss_pred ---cChhhHHHHHHHHhhC-C-CEEEEEcCCccChHhhhcCCeeeEeccc--hHHHhhccCEEecCCCchhHHHHH
Q 002430 569 ---VFPEHKYEIVKRLQER-K-HICGMTGDGVNDAPALKKADIGIAVADA--TDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 569 ---~sP~~K~~iV~~lq~~-g-~~V~m~GDG~NDapaLk~AdVGIamg~g--td~A~~aADivl~~~~~~~i~~~i 637 (923)
+.+..|-.+++.+.++ | ..+.|+||+.||.+|.++|+++|+++.+ .+.....+|+++ +++..++..+
T Consensus 150 ~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (225)
T 1nnl_A 150 QPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVELLGEL 223 (225)
T ss_dssp SGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGGCC--
T ss_pred CcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeee--cCHHHHHHHH
Confidence 1123566666655443 4 5689999999999999999998888632 233445689998 4566555433
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.6e-06 Score=94.32 Aligned_cols=67 Identities=25% Similarity=0.242 Sum_probs=57.4
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 572 ~~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
..|..-++.+.++ | .-|+++||+.||.+|++.|++|+||+++.+..|++||+|..+++=..+..+++
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4688777777653 3 34899999999999999999999999999999999999998777777887775
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.21 E-value=4.3e-06 Score=89.94 Aligned_cols=71 Identities=21% Similarity=0.218 Sum_probs=58.7
Q ss_pred ecChh--hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 568 GVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 568 r~sP~--~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.+.|. .|...++.+.+. | ..|.++||+.||.+|++.|++|++|+++.+..++.||+++.+++-..+..+++
T Consensus 191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 34444 788888887653 2 45899999999999999999999999888888889999998877777777774
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.20 E-value=4e-07 Score=102.14 Aligned_cols=108 Identities=13% Similarity=0.142 Sum_probs=75.2
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe---
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar--- 568 (923)
..++|++.+.|+.||++|++|+++||.....++.+|+++|+..++ +.+.+.|......-++ ..-.+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~i-p~~~Vig~~l~~~~dG----------~~tg~~~~ 288 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKM-KEEKVLGLRLMKDDEG----------KILPKFDK 288 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCC-CGGGEEEECEEECTTC----------CEEEEECT
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCC-CcceEEEeEEEEecCC----------ceeeeecC
Confidence 357899999999999999999999999999999999999875432 2222323221100000 01111
Q ss_pred ----cChhhHHHHHHHHhhC--C-CEEEEEcCCccChHhhhc-CCeeeEe
Q 002430 569 ----VFPEHKYEIVKRLQER--K-HICGMTGDGVNDAPALKK-ADIGIAV 610 (923)
Q Consensus 569 ----~sP~~K~~iV~~lq~~--g-~~V~m~GDG~NDapaLk~-AdVGIam 610 (923)
+..+.|...++.+-+. | ..+.++|||.||.|||++ +|.|+++
T Consensus 289 ~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 289 DFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp TSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred ccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 2457899999876432 2 347788999999999986 6666665
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.20 E-value=4.4e-06 Score=86.41 Aligned_cols=110 Identities=17% Similarity=0.157 Sum_probs=76.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeE-EecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF-AGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf-ar~sP 571 (923)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. ......... +....+. .. ....+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~-~~~~~~~~~---~~~~~g~----------~~~~~~~~ 157 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH-LIATDPEYR---DGRYTGR----------IEGTPSFR 157 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE-EEECEEEEE---TTEEEEE----------EESSCSST
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-EEEcceEEE---CCEEeee----------ecCCCCcc
Confidence 479999999999999999999999999999999999999852 110000000 0000000 00 01224
Q ss_pred hhHHHHHHHHh-hCC------CEEEEEcCCccChHhhhcCCeeeEeccchHH
Q 002430 572 EHKYEIVKRLQ-ERK------HICGMTGDGVNDAPALKKADIGIAVADATDA 616 (923)
Q Consensus 572 ~~K~~iV~~lq-~~g------~~V~m~GDG~NDapaLk~AdVGIamg~gtd~ 616 (923)
..|...++.+. +.| ..|.|+||+.||.+|++.|++++++......
T Consensus 158 ~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~l 209 (232)
T 3fvv_A 158 EGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGL 209 (232)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHHH
T ss_pred hHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHHH
Confidence 67777665543 345 5799999999999999999999999644333
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.12 E-value=3e-06 Score=86.98 Aligned_cols=127 Identities=10% Similarity=0.125 Sum_probs=87.1
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+ +.+... ...-.|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~-~~~~~~----------------~~kp~~ 145 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF--DAIV-GSSLDG----------------KLSTKE 145 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEE-EECTTS----------------SSCSHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe--eeee-ccCCCC----------------CCCCCH
Confidence 357899999999999999999999999999899999999975311 0011 000000 000012
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe---eeEeccchH--HHhhccCEEecCCCchhHHHHHHH
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI---GIAVADATD--AARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV---GIamg~gtd--~A~~aADivl~~~~~~~i~~~i~~ 639 (923)
+--..+.+.+.-....|.|+||+.||..|.+.|++ ++++|.+.. ..+..||+++ +++..+...+..
T Consensus 146 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~ 216 (226)
T 3mc1_A 146 DVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHT
T ss_pred HHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHH
Confidence 22233334443334568999999999999999999 888874433 3357899998 568888877753
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.08 E-value=5.8e-06 Score=87.43 Aligned_cols=126 Identities=13% Similarity=0.129 Sum_probs=85.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.+++.+.++.|++.|+++.++|++.......+.+.+|+..... ...+ +.+.. ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~-~~~~-~~~~~----------------~~~kp~~~ 164 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP-DFLV-TPDDV----------------PAGRPYPW 164 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC-SCCB-CGGGS----------------SCCTTSSH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccCh-Hhee-cCCcc----------------CCCCCCHH
Confidence 467999999999999999999999999888888888887643211 1111 11100 00111234
Q ss_pred hHHHHHHHHhhCC-CEEEEEcCCccChHhhhcCC---eeeEeccc------------------------hHHHhhc-cCE
Q 002430 573 HKYEIVKRLQERK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAARSA-SDI 623 (923)
Q Consensus 573 ~K~~iV~~lq~~g-~~V~m~GDG~NDapaLk~Ad---VGIamg~g------------------------td~A~~a-ADi 623 (923)
--..+.+.+.-.. ..|.|+||+.||..|++.|+ ++++++.+ .+..+.+ ||+
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 4445555555444 56899999999999999999 66666644 2333334 999
Q ss_pred EecCCCchhHHHHHH
Q 002430 624 VLTEPGLSVIISAVL 638 (923)
Q Consensus 624 vl~~~~~~~i~~~i~ 638 (923)
++ +++..+...+.
T Consensus 245 v~--~~~~el~~~l~ 257 (267)
T 1swv_A 245 TI--ETMQELESVME 257 (267)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred ec--cCHHHHHHHHH
Confidence 98 56777777664
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.05 E-value=4.6e-06 Score=85.15 Aligned_cols=122 Identities=15% Similarity=0.175 Sum_probs=82.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.+++.+.++.+++.|+++.++|+........+.+.+|+.... ...+...... ...-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~-----------------~~kp~~~ 154 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKLP-----------------YSKPHPQ 154 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTSS-----------------CCTTSTH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC--cEEEeccccC-----------------CCCCChH
Confidence 45789999999999999999999999988888888888874211 1111100000 0011133
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe----ccchHHHhhccCEEecCCCchhHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam----g~gtd~A~~aADivl~~~~~~~i~~ 635 (923)
--..+.+.+.-....|.++||+.||.+|++.|++++++ +++.+..+..||+++. ++..+..
T Consensus 155 ~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~--~~~el~~ 219 (226)
T 1te2_A 155 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTELTA 219 (226)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGGCCH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEEC--CHHHHhH
Confidence 33444455544445689999999999999999999998 3344445778999984 4555443
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.01 E-value=5.8e-06 Score=85.06 Aligned_cols=127 Identities=12% Similarity=0.087 Sum_probs=85.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.... ...-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 151 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK--INIVTRDDVS-----------------YGKPDPD 151 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS--SCEECGGGSS-----------------CCTTSTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh--heeeccccCC-----------------CCCCChH
Confidence 46789999999999999999999999999899999999985421 1111111000 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe---eeEec-cchHHHhhc-cCEEecCCCchhHHHHHHHh
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI---GIAVA-DATDAARSA-SDIVLTEPGLSVIISAVLTS 640 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV---GIamg-~gtd~A~~a-ADivl~~~~~~~i~~~i~~g 640 (923)
--..+.+.+.-...-|.|+||+.||..|.+.|++ +|++| +..+..+.. ||+++ +++..+...++..
T Consensus 152 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~~ 222 (233)
T 3s6j_A 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDEI 222 (233)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGGT
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHHH
Confidence 2223333333233558999999999999999999 66555 444444444 99998 5788888777543
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.96 E-value=5.9e-06 Score=84.21 Aligned_cols=114 Identities=5% Similarity=-0.035 Sum_probs=76.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.+++.|+++.++|++ ..+..+.+.+|+.... ...+.+.... ...-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 149 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF--DAIADPAEVA-----------------ASKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC--SEECCTTTSS-----------------SCTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc--ceEeccccCC-----------------CCCCChH
Confidence 46799999999999999999999998 3445667778874311 1111110000 0011122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCC
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 628 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~ 628 (923)
--..+.+.+.-....|.++||+.||.+|++.|+++++|.++.+..+ .||+++.+.
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~ 204 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDT 204 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSG
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCH
Confidence 2233444444334568999999999999999999999987777677 899998544
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.96 E-value=4.2e-06 Score=87.62 Aligned_cols=123 Identities=17% Similarity=0.140 Sum_probs=83.4
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
.++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.... ...+.+.... ...-.|
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~ 173 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLP-----------------EIKPHP 173 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSS-----------------SCTTSS
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE--EEEEecccCC-----------------CCCcCH
Confidence 357799999999999999999999999999999999999985311 1111110000 001123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE-ecc----chHHHhhccCEEecCCCchhHHH
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VAD----ATDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa-mg~----gtd~A~~aADivl~~~~~~~i~~ 635 (923)
+--..+.+.+.-....|.|+||+.||.+|.+.|+++.. +.. +.+..+..+|+++. ++..+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~~ 240 (243)
T 2hsz_A 174 APFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILK 240 (243)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGG
T ss_pred HHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHHH
Confidence 34444555555445568999999999999999998844 432 23445678999984 4555543
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.8e-05 Score=81.64 Aligned_cols=114 Identities=11% Similarity=0.088 Sum_probs=73.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.++|+... +..+.+++|+.... ...+.+. .. ....-.|+
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f--~~i~~~~---------~~--------~~~Kp~~~ 150 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF--HAIVDPT---------TL--------AKGKPDPD 150 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC--SEECCC--------------------------CC
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc--CEEeeHh---------hC--------CCCCCChH
Confidence 3689999999999999999999999755 67778888875321 1111110 00 01111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCC
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 628 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~ 628 (923)
-=..+.+.+.-...-|.|+||+.||..|.+.|++++++.++.+..+ .||+++.+.
T Consensus 151 ~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~ 205 (233)
T 3nas_A 151 IFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQT 205 (233)
T ss_dssp HHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSSG
T ss_pred HHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCCh
Confidence 3344555555444668999999999999999999999986555555 899998543
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.95 E-value=5.6e-06 Score=87.94 Aligned_cols=68 Identities=28% Similarity=0.337 Sum_probs=58.8
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHH
Q 002430 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 572 ~~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~ 639 (923)
..|..-++.+.+. | .-|.++||+.||.+|++.|++|+||+++.+.+|++||+|..+++=..+..++++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 4788888777654 3 358999999999999999999999999999999999999998888888888753
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.95 E-value=7.1e-06 Score=85.50 Aligned_cols=138 Identities=14% Similarity=0.044 Sum_probs=89.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhh--hcCeEEecC
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE--KADGFAGVF 570 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~vfar~s 570 (923)
+++|++.++++.|+++|+++.++|+.....+..+.+ |+.. + ..+.+.+.... +..+..... +...+-+-.
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~--~--~~v~~~~~~~~--~~~~~~~~~kp~p~~~~~~~ 148 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVE--K--DRIYCNHASFD--NDYIHIDWPHSCKGTCSNQC 148 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSC--G--GGEEEEEEECS--SSBCEEECTTCCCTTCCSCC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCC--C--CeEEeeeeEEc--CCceEEecCCCCcccccccc
Confidence 578999999999999999999999999888887777 6632 1 11211111000 000000000 000011112
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhc--cCEEecCCCchhHHHHHHHh
Q 002430 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA--SDIVLTEPGLSVIISAVLTS 640 (923)
Q Consensus 571 P~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~a--ADivl~~~~~~~i~~~i~~g 640 (923)
..+|..+++.+......+.|+||+.||.+|.++|++.++..+..+..+.. +|+++ +++..+...+...
T Consensus 149 ~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~~ 218 (236)
T 2fea_A 149 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIENV 218 (236)
T ss_dssp SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHTS
T ss_pred CCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHHh
Confidence 56788999998877788999999999999999999988753222223333 77776 5788888777543
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=1.9e-05 Score=83.52 Aligned_cols=64 Identities=23% Similarity=0.291 Sum_probs=52.6
Q ss_pred hhHHHHHHHHhhC-C-----CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 572 EHKYEIVKRLQER-K-----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 572 ~~K~~iV~~lq~~-g-----~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.+|...++.+.++ | ..|+++||+.||.+|++.|++|++|+++.+ . +++++..+++-..+..+++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888887665 3 569999999999999999999999998888 3 7888887776666666664
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.92 E-value=6.1e-06 Score=84.15 Aligned_cols=123 Identities=16% Similarity=0.095 Sum_probs=77.3
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhh
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 573 (923)
+.+++.+.++.+++.|+++.++|++.........+.+|+.... ...+...... ...-.|+-
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----------------~~k~~~~~ 150 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF--DIIIGGEDVT-----------------HHKPDPEG 150 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC--SEEECGGGCS-----------------SCTTSTHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe--eeeeehhhcC-----------------CCCCChHH
Confidence 4689999999999999999999999988888888888875321 1111100000 00001122
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe-c---cchHHHhhc-cCEEecCCCchhHHHHH
Q 002430 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A---DATDAARSA-SDIVLTEPGLSVIISAV 637 (923)
Q Consensus 574 K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam-g---~gtd~A~~a-ADivl~~~~~~~i~~~i 637 (923)
-..+.+.+.-....|.++||+.||.+|++.|++++++ + ++.+..+.. ||+++. ++..+...+
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 217 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIS--TLGQLISVP 217 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEES--SGGGGC---
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEEC--CHHHHHHhh
Confidence 2233344333334588999999999999999998887 3 333333434 899984 455555444
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.90 E-value=8.8e-06 Score=84.54 Aligned_cols=125 Identities=13% Similarity=0.066 Sum_probs=83.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
.++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.... ...+.+.... ...-.|
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 169 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF--KYIAGSNLDG-----------------TRVNKN 169 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTTS-----------------CCCCHH
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE--EEEEeccccC-----------------CCCCCH
Confidence 347899999999999999999999999999999999999985311 0011000000 000011
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCccChHhhhcCCe---eeEeccch--HHHhhccCEEecCCCchhHHHHH
Q 002430 572 EHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADI---GIAVADAT--DAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 572 ~~K~~iV~~lq~~-g~~V~m~GDG~NDapaLk~AdV---GIamg~gt--d~A~~aADivl~~~~~~~i~~~i 637 (923)
+--..+.+.+.-. ...|.++||+.||..|.+.|++ ++++|.+. +..+..+|+++. ++..++..+
T Consensus 170 ~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 170 EVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred HHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 1112333444334 4568999999999999999999 66666443 333578999984 566666554
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.88 E-value=7.6e-06 Score=88.11 Aligned_cols=131 Identities=17% Similarity=0.176 Sum_probs=87.8
Q ss_pred CCCccHHHHHHHHHhC-CCEEEEEccC---------------------ChHHHHHHHHHhCCCCCCCCCCcccCcccccc
Q 002430 493 PPRHDSAETIRRALNL-GVNVKMITGD---------------------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDAS 550 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~a-GI~v~mlTGD---------------------~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~ 550 (923)
.+++++.+.++.+++. |+++...|.. ....+..+.++.|+...........+..
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 4678999999999998 9998888876 2333344444455421100000000000
Q ss_pred cCcchHHHHhhhcCeEEecCh--hhHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEE
Q 002430 551 IAALPVDELIEKADGFAGVFP--EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624 (923)
Q Consensus 551 ~~~~~~~~~~~~~~vfar~sP--~~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADiv 624 (923)
....+....| ..|...++.+.++ | ..|+|+||+.||.+|++.|++|++|+++.+..++.||++
T Consensus 198 -----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v 266 (289)
T 3gyg_A 198 -----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI 266 (289)
T ss_dssp -----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCB
T ss_pred -----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEE
Confidence 0012334444 3577777666543 3 458999999999999999999999999988899999999
Q ss_pred ecCCCchhHHHHHH
Q 002430 625 LTEPGLSVIISAVL 638 (923)
Q Consensus 625 l~~~~~~~i~~~i~ 638 (923)
+.+++-..+..+++
T Consensus 267 ~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 267 TDSEYSKGITNTLK 280 (289)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHH
Confidence 98777777777774
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.88 E-value=9.7e-06 Score=83.51 Aligned_cols=125 Identities=15% Similarity=0.103 Sum_probs=85.4
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
-++.|++.++++.|++.|+++.++|+.....+..+.+++|+.... ...+.+.+. ....-.|
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~ 142 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF--DLIVGGDTF-----------------GEKKPSP 142 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTSS-----------------CTTCCTT
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh--eEEEecCcC-----------------CCCCCCh
Confidence 356899999999999999999999999988888999999974311 111111100 0011124
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee-eEeccc--hHHHhhccCEEecCCCchhHHHHHH
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG-Iamg~g--td~A~~aADivl~~~~~~~i~~~i~ 638 (923)
+--..+.+.+.-....|.|+||+.||.+|.+.|++. |++..| .... ..+|+++ +++..+...+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~ 209 (222)
T 2nyv_A 143 TPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHH
Confidence 444555555554455689999999999999999988 666432 2111 5789888 46777776664
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.87 E-value=7.4e-06 Score=84.44 Aligned_cols=126 Identities=10% Similarity=0.029 Sum_probs=88.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+ +.+.. ....-.|+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~-~~~~~----------------~~~kp~~~ 159 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF--DHVL-SVDAV----------------RLYKTAPA 159 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC--SEEE-EGGGT----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc--CEEE-Eeccc----------------CCCCcCHH
Confidence 46789999999999999999999999998888888889885321 1111 11000 00111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe----ccchHHHhhccCEEecCCCchhHHHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam----g~gtd~A~~aADivl~~~~~~~i~~~i~~ 639 (923)
--..+.+.+.-....|.|+||+.||..|.+.|++++++ +++.+..+..+|+++ +++..+...+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 160 AYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp HHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 33344455543445689999999999999999999999 444444456799998 578888887753
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=8.1e-06 Score=81.82 Aligned_cols=119 Identities=15% Similarity=0.095 Sum_probs=80.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
.+.|++.+.++.|++.|+++.++|++...... ..+.+|+.... ..+...+.. ....-.|+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f---~~~~~~~~~----------------~~~Kp~~~ 144 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF---TEILTSQSG----------------FVRKPSPE 144 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE---EEEECGGGC----------------CCCTTSSH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe---eeEEecCcC----------------CCCCCCcH
Confidence 46799999999999999999999999988877 77888874210 001000000 00011123
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee-eEeccchHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG-Iamg~gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
--..+.+.++-....|.++||+.||.+|++.|+++ |+|++|.+ .||+++ +++..+...+
T Consensus 145 ~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~~----~a~~v~--~~~~el~~~l 204 (207)
T 2go7_A 145 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY----EGNHRI--QALADISRIF 204 (207)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSC----TTEEEC--SSTTHHHHHT
T ss_pred HHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCCC----CCCEEe--CCHHHHHHHH
Confidence 33345555544445689999999999999999997 88886652 689887 4566665543
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.83 E-value=1.1e-05 Score=82.99 Aligned_cols=125 Identities=11% Similarity=0.070 Sum_probs=84.6
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
-++.|++.+.++.|++.|+++.++|+........+.+++|+.... ...+.+... ....-.|
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~ 155 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF--DHLISVDEV-----------------RLFKPHQ 155 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEGGGT-----------------TCCTTCH
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc--ceeEehhhc-----------------ccCCCCh
Confidence 357899999999999999999999999998888888999975321 011110000 0001112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe----ccchHHHhhccCEEecCCCchhHHHHH
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam----g~gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
+--..+.+.+.-....|.++||+.||..|.+.|++++++ +++.+..+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVV--SDVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEE--SSHHHHHHTC
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEe--CCHHHHHHHH
Confidence 222344444443345689999999999999999999999 333333456889998 4566666544
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.82 E-value=3.6e-05 Score=79.17 Aligned_cols=124 Identities=17% Similarity=0.136 Sum_probs=85.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++. +++.++|+..........+.+|+.... ...+ +.+. . ....-.|+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~~~-~~~~-----------~-----~~~kp~~~ 159 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF--DSIT-TSEE-----------A-----GFFKPHPR 159 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEE-EHHH-----------H-----TBCTTSHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc--ceeE-eccc-----------c-----CCCCcCHH
Confidence 5679999999999999 999999999998888888899874311 0011 0000 0 00111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-cChHhhhcCC---eeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKAD---IGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~-NDapaLk~Ad---VGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
--..+.+.+.-...-|.|+||+. ||..|.+.|+ ++++++++.+..+..+|+++ +++..+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred HHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee--CCHHHHHHHHH
Confidence 23344444443445689999997 9999999999 67777766666666899998 56777777664
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.82 E-value=4.6e-05 Score=78.32 Aligned_cols=121 Identities=13% Similarity=0.109 Sum_probs=77.1
Q ss_pred CCCccHHHHHHHHHhC-CCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~a-GI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
++.|++.+.++.|++. |+++.++|+.....+....+.+|+.... + ..+.+.+. . ..|
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~------------------~--~~~ 150 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDA------------------L--DRN 150 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTC------------------S--SGG
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc-C-cceecCCC------------------c--Ccc
Confidence 3679999999999999 9999999999998888888888885421 1 11111100 0 001
Q ss_pred hhHH----HHHHHHh--hCCCEEEEEcCCccChHhhhcCCe---eeEeccchHH-Hhh-ccCEEecCCCchhHHHHH
Q 002430 572 EHKY----EIVKRLQ--ERKHICGMTGDGVNDAPALKKADI---GIAVADATDA-ARS-ASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 572 ~~K~----~iV~~lq--~~g~~V~m~GDG~NDapaLk~AdV---GIamg~gtd~-A~~-aADivl~~~~~~~i~~~i 637 (923)
.-+. .+.+.+. -....|.|+||+.||.+|.+.|++ +++.+.+... .+. .+|+++. ++..+...+
T Consensus 151 k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~--~~~el~~~l 225 (234)
T 2hcf_A 151 ELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVL 225 (234)
T ss_dssp GHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHH
T ss_pred chHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeC--CHHhHHHHH
Confidence 1122 2233333 223468999999999999999994 4444533332 222 3899984 344555444
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.81 E-value=2.5e-05 Score=80.42 Aligned_cols=122 Identities=10% Similarity=0.053 Sum_probs=81.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.+. ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~ 163 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF--DSIIGSGDT-----------------GTIKPSPE 163 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEETSS-----------------SCCTTSSH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe--eeEEccccc-----------------CCCCCChH
Confidence 46899999999999999999999999999999999999985311 011100000 00111222
Q ss_pred hHHHHHHHHhhCCC-EEEEEcCCccChHhhhcCCe-eeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQERKH-ICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~g~-~V~m~GDG~NDapaLk~AdV-GIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
--..+.+.+.-... .|.|+||+.||..|.++|++ +|.++++.+ ..+|+++ +++..+...+.
T Consensus 164 ~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 164 PVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 23445555544444 68899999999999999997 667776554 3677777 56777776653
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.81 E-value=2.2e-05 Score=81.72 Aligned_cols=126 Identities=14% Similarity=0.081 Sum_probs=80.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.++|+.....+...-+. |+.........+.+.+.. ...-.|+
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~-----------------~~kp~~~ 170 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK-----------------YGKPNPE 170 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS-----------------SCTTSSH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC-----------------CCCCChH
Confidence 5679999999999999999999999887777666666 775321001111111000 0111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee-eEeccch----HHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT----DAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG-Iamg~gt----d~A~~aADivl~~~~~~~i~~~i~ 638 (923)
--..+.+.+.-...-|.|+||+.||..|.+.|+++ |.+..|. +..+..||+++ +++..+...++
T Consensus 171 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 171 PYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 22334444433345689999999999999999984 4454332 22334699998 56777776663
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.80 E-value=2.7e-05 Score=80.87 Aligned_cols=127 Identities=11% Similarity=0.021 Sum_probs=79.0
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
.++.|++.+.++.|++.|+++.++|+..........+. |+.....+...+.+.... ...-.|
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~-----------------~~kp~~ 168 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK-----------------YGKPNP 168 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS-----------------SCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC-----------------CCCCCC
Confidence 35789999999999999999999999887766666666 775321001111111000 011123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee-eEeccc--h--HHHhhccCEEecCCCchhHHHHHH
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA--T--DAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG-Iamg~g--t--d~A~~aADivl~~~~~~~i~~~i~ 638 (923)
+--..+.+.+.-...-|.|+||+.||..|.+.|+++ |++..| . +..+..||+++ +++..+...+.
T Consensus 169 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 238 (247)
T 3dv9_A 169 EPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF--HSMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 333344555544445689999999999999999975 444432 2 22334799998 56777776664
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.80 E-value=3.2e-05 Score=81.85 Aligned_cols=126 Identities=11% Similarity=0.080 Sum_probs=84.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..+.+.+... ...-.|+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~----------------~~kp~~~ 172 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP--ASTVFATDVV----------------RGRPFPD 172 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC--SEEECGGGSS----------------SCTTSSH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC--ceEecHHhcC----------------CCCCCHH
Confidence 567899999999999999999999999988888888888643211 1111111000 0011122
Q ss_pred hHHHHHHHHhhCC-CEEEEEcCCccChHhhhcCC---eeeEeccc------------------------hHHH-hhccCE
Q 002430 573 HKYEIVKRLQERK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAA-RSASDI 623 (923)
Q Consensus 573 ~K~~iV~~lq~~g-~~V~m~GDG~NDapaLk~Ad---VGIamg~g------------------------td~A-~~aADi 623 (923)
-=..+.+.+.-.. ..|.|+||+.||..|.+.|+ |+|++|.+ .+.. ...+|+
T Consensus 173 ~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~ 252 (277)
T 3iru_A 173 MALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHY 252 (277)
T ss_dssp HHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCE
Confidence 2234455554445 67899999999999999999 55666622 2233 334999
Q ss_pred EecCCCchhHHHHHH
Q 002430 624 VLTEPGLSVIISAVL 638 (923)
Q Consensus 624 vl~~~~~~~i~~~i~ 638 (923)
++ +++..+...+.
T Consensus 253 v~--~~~~el~~~l~ 265 (277)
T 3iru_A 253 VI--DSVADLETVIT 265 (277)
T ss_dssp EE--SSGGGTHHHHH
T ss_pred Ee--cCHHHHHHHHH
Confidence 98 56777777764
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=6.7e-05 Score=75.01 Aligned_cols=136 Identities=11% Similarity=0.159 Sum_probs=82.8
Q ss_pred CccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhh--hcCceeEEeecCCCCCcceEE
Q 002430 337 GTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEA--RAGVREVHFLPFNPVDKRTAL 414 (923)
Q Consensus 337 GTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~--~~~~~~l~~~~F~s~~k~~sv 414 (923)
||||+|++.|.++.......+.+.++++.+++.++..++ ||+..||+.++...... ....+..+..|- +-...
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~G----~Gv~~ 75 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSE-HPLGTAITKYCKQELDTETLGTCIDFQVVPG----CGISC 75 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSS-CHHHHHHHHHHHHHHTCSCCCCCBCCEEETT----TEEEE
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCC-CHHHHHHHHHHHhhcCCCCCCCccceEEecc----ceEEE
Confidence 899999999998753111124577888888887776665 99999999876421000 001111222221 11222
Q ss_pred EEEecC-----------------------------------------------CcEEEEEcCcHHHHHHhccCChhHHHH
Q 002430 415 TYIDSD-----------------------------------------------GNWHRASKGAPEQILALCNCREDVRKK 447 (923)
Q Consensus 415 ~~~~~~-----------------------------------------------g~~~~~~KGa~e~il~~~~~~~~~~~~ 447 (923)
.+...+ .+.+.+..|+++.+.+..- .+.+.
T Consensus 76 ~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~i~~~ 152 (185)
T 2kmv_A 76 KVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGL---VINND 152 (185)
T ss_dssp EECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTC---CCCHH
T ss_pred EECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCC---CCCHH
Confidence 221100 0115677899998765321 11223
Q ss_pred HHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCC
Q 002430 448 VHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (923)
Q Consensus 448 ~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~ 493 (923)
+...+.++..+|..++.+|... +++|++++.|+
T Consensus 153 ~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 153 VNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 4455677788999999999865 89999999995
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.76 E-value=2.7e-05 Score=79.96 Aligned_cols=123 Identities=10% Similarity=0.085 Sum_probs=79.9
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCC---hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecC
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQ---LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~---~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~s 570 (923)
+.|++.+.++.|++.|+++.++|+.. ........+.+|+.... ...+.+. +. . ...-.
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f--~~~~~~~------------~~-~----~~kp~ 160 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFAD------------EV-L----SYKPR 160 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC--SEEEEHH------------HH-T----CCTTC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh--hhheecc------------cc-C----CCCCC
Confidence 47999999999999999999999998 88888888888874311 0011000 00 0 00011
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCc-cChHhhhcCCeeeEe---ccchHHHhhccCEEecCCCchhHHHHH
Q 002430 571 PEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 571 P~~K~~iV~~lq~~g~~V~m~GDG~-NDapaLk~AdVGIam---g~gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
|+--..+.+.+.-....|.++||+. ||..|.+.|++++++ +++.+..+..+|+++ +++..+...+
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 229 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVI 229 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHH
Confidence 2222233333332335689999999 999999999999998 322222234578877 5677777665
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.75 E-value=3.1e-05 Score=81.41 Aligned_cols=128 Identities=16% Similarity=0.049 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... +...+.+.+.. ....-.|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-~~~i~~~~~~~----------------~~~Kp~~~ 172 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA-GEHIYDPSWVG----------------GRGKPHPD 172 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH-CSCEECGGGGT----------------TCCTTSSH
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc-cceEEeHhhcC----------------cCCCCChH
Confidence 45789999999999999999999999998899999999874210 00011110000 00111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee-eEeccc-------h-HHHhhccCEEecCCCchhHHHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA-------T-DAARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG-Iamg~g-------t-d~A~~aADivl~~~~~~~i~~~i~~ 639 (923)
-=..+.+.+.-....|.|+||+.||..|.+.|+++ |.+..| . +..+..+|+++ +++..+...+..
T Consensus 173 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 173 LYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 22333444433345689999999999999999998 555433 2 33344599998 678888887754
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.75 E-value=1.1e-05 Score=81.28 Aligned_cols=121 Identities=15% Similarity=0.075 Sum_probs=82.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.... ...+.+.+. ....-.|+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 149 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF--DIVLSGEEF-----------------KESKPNPE 149 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGC-----------------SSCTTSSH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe--eeEeecccc-----------------cCCCCChH
Confidence 46899999999999999999999999999999999999985311 011111000 00111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-c-chHHHhhccCEEecCCCchhHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-D-ATDAARSASDIVLTEPGLSVII 634 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~-gtd~A~~aADivl~~~~~~~i~ 634 (923)
--..+.+.+.-....|.++||+.||..|.+.|+++..+. . +....+..+|+++. ++..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~ 211 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVL 211 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHH
Confidence 334455555444456899999999999999999988884 2 23334467899984 455443
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.70 E-value=4.7e-05 Score=75.45 Aligned_cols=126 Identities=14% Similarity=0.107 Sum_probs=79.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCCh---------------HHHHHHHHHhC--CCCCCCCCCcccCcccccccCcch
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLG--MGTNMYPSSSLLGQDKDASIAALP 555 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~---------------~tA~~ia~~~G--i~~~~~~~~~l~~~~~~~~~~~~~ 555 (923)
++.|++.++++.|++.|+++.++|+... ..+..+.+++| +..- +. ....+.+..
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~-~~~~~~~~~------- 97 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAI-FM-CPHGPDDGC------- 97 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEE-EE-ECCCTTSCC-------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEE-EE-cCCCCCCCC-------
Confidence 5789999999999999999999999875 45566666777 3210 00 000000000
Q ss_pred HHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe---eeEeccchHHHh----hccCEEecCC
Q 002430 556 VDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI---GIAVADATDAAR----SASDIVLTEP 628 (923)
Q Consensus 556 ~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV---GIamg~gtd~A~----~aADivl~~~ 628 (923)
.+..-.|+-=..+.+.+.-....+.|+||+.||..|.++|++ +|+.|.+..... ..+|+++ +
T Consensus 98 ---------~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~--~ 166 (179)
T 3l8h_A 98 ---------ACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC--E 166 (179)
T ss_dssp ---------SSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--S
T ss_pred ---------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--c
Confidence 000111222233444444344568999999999999999995 666665544443 4579998 5
Q ss_pred CchhHHHHHH
Q 002430 629 GLSVIISAVL 638 (923)
Q Consensus 629 ~~~~i~~~i~ 638 (923)
++..++..+.
T Consensus 167 ~l~el~~~l~ 176 (179)
T 3l8h_A 167 DLAAVAEQLL 176 (179)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6777777663
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=3.5e-05 Score=80.02 Aligned_cols=124 Identities=14% Similarity=0.066 Sum_probs=81.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.... ...+.+.+.. ...-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 165 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL--DSCLSADDLK-----------------IYKPDPR 165 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc--CEEEEccccC-----------------CCCCCHH
Confidence 47799999999999999999999999998888889999975311 1111110000 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe---ccchHHHhhcc-CEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSAS-DIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam---g~gtd~A~~aA-Divl~~~~~~~i~~~i 637 (923)
--..+.+.+.-....|.|+||+.||..|.+.|++.... +.+.+..+..+ |+++ +++..+...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 166 IYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceee--CCHHHHHHHH
Confidence 33344455543445688999999999999999965443 33222223456 9988 4677776655
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.68 E-value=9.7e-05 Score=78.95 Aligned_cols=66 Identities=18% Similarity=0.116 Sum_probs=33.9
Q ss_pred hHHHHHHHHhhC-C----CE--EEEEcCCccChHhhhcCCeeeEeccch---HHHhhc--cC-EEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER-K----HI--CGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--SD-IVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~-g----~~--V~m~GDG~NDapaLk~AdVGIamg~gt---d~A~~a--AD-ivl~~~~~~~i~~~i~ 638 (923)
.|...++.+.+. | .. |.++||+.||.+|++.|++||+|+++. +..++. || ++..+++-..+..+++
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 576666665432 3 24 899999999999999999999999876 455543 78 8887766666766664
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=1.9e-05 Score=84.40 Aligned_cols=129 Identities=10% Similarity=0.010 Sum_probs=83.3
Q ss_pred CCCCccHHHHHHHHHhCCC--EEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEec
Q 002430 492 DPPRHDSAETIRRALNLGV--NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI--~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 569 (923)
-++.|++.+.++.|++.|+ ++.++|+.....+....+.+|+.... ...+.+...... ...+.-
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~v~~~~~~~~~-------------~~~~Kp 205 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF--DGLTYCDYSRTD-------------TLVCKP 205 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC--SEEECCCCSSCS-------------SCCCTT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc--ceEEEeccCCCc-------------ccCCCc
Confidence 3578999999999999999 99999999999999999999985421 111111000000 000111
Q ss_pred ChhhHHHHHHHHhhCC-CEEEEEcCCccChHhhhcCCeeeEeccchHHH------hhccCEEecCCCchhHHHHH
Q 002430 570 FPEHKYEIVKRLQERK-HICGMTGDGVNDAPALKKADIGIAVADATDAA------RSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 570 sP~~K~~iV~~lq~~g-~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A------~~aADivl~~~~~~~i~~~i 637 (923)
.|+-=..+.+.+.-.. ..|.|+||+.||..|.++|++|.+|+.+.+.. ...||+++ +++..+..++
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi--~sl~el~~~l 278 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI--SDILELPHVV 278 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEE--SSGGGGGGTS
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEe--CCHHHHHHHh
Confidence 1222223334443344 67899999999999999999998886322211 33788988 4566655443
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00018 Score=74.55 Aligned_cols=124 Identities=14% Similarity=0.160 Sum_probs=80.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.... ...-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 154 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF--EHVIISDFEG-----------------VKKPHPK 154 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTCHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc--cEEEEeCCCC-----------------CCCCCHH
Confidence 46799999999999999999999999888888888899875311 1111110000 0011122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-cChHhhhcCCeeeEe---ccchHHHhh---ccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARS---ASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~-NDapaLk~AdVGIam---g~gtd~A~~---aADivl~~~~~~~i~~~i 637 (923)
-=..+.+.+.-....+.|+||+. ||..|.+.|+++... |.+...... .+|+++ +++..+...+
T Consensus 155 ~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l 224 (241)
T 2hoq_A 155 IFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVL 224 (241)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHH
Confidence 22233444433345689999998 999999999998655 333333332 689988 4577776655
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.64 E-value=2.3e-05 Score=80.76 Aligned_cols=124 Identities=8% Similarity=0.039 Sum_probs=83.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.+.. ...-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 155 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPVQ-----------------VYKPDNR 155 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGGT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh--heEEEecccC-----------------CCCCCHH
Confidence 47799999999999999999999999988888888899874311 1111110000 1111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-cc---hHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DA---TDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~g---td~A~~aADivl~~~~~~~i~~~i 637 (923)
--..+.+.+.-....|.|+||+.||..|.+.|+++.++- .+ .+..+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 222 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 334445555434456889999999999999999998882 22 222345689888 4566665544
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.53 E-value=4.8e-05 Score=79.61 Aligned_cols=68 Identities=12% Similarity=0.237 Sum_probs=54.2
Q ss_pred EEecChh--hHHHHHHHHhhCCCEEEEEcCCccChHhhhcC--CeeeEeccchHHHhhccCEEecC-CCchhHHHHHH
Q 002430 566 FAGVFPE--HKYEIVKRLQERKHICGMTGDGVNDAPALKKA--DIGIAVADATDAARSASDIVLTE-PGLSVIISAVL 638 (923)
Q Consensus 566 far~sP~--~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~A--dVGIamg~gtd~A~~aADivl~~-~~~~~i~~~i~ 638 (923)
+-.+.|. +|..-++.|.+.-. |+++||+.||.+||+.| +.||||+++ ++.||+++.+ ++-..+..+++
T Consensus 151 ~lei~~~~~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 151 IIELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp EEEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred EEEEEcCCCCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 3345554 79999999987633 88999999999999999 999999987 6789999876 55555666553
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00021 Score=73.00 Aligned_cols=135 Identities=16% Similarity=0.123 Sum_probs=80.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCC---------------hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHH
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~---------------~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 557 (923)
++.|++.+++++|++.|+++.++|+.. ...+..+.+++|+.- .. .+............
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---~~-~~~~~~~~~~~~~~--- 122 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL---DG-IYYCPHHPQGSVEE--- 122 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC---SE-EEEECCBTTCSSGG---
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce---EE-EEECCcCCCCcccc---
Confidence 678999999999999999999999998 366777788888741 11 11000000000000
Q ss_pred HHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee--eEeccc---hHHHhhccCEEecCCCchh
Q 002430 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAVADA---TDAARSASDIVLTEPGLSV 632 (923)
Q Consensus 558 ~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG--Iamg~g---td~A~~aADivl~~~~~~~ 632 (923)
......+..-.|+-=..+.+.+.-....+.|+||+.||..+.++|++. |.+..| .+.....+|+++ +++..
T Consensus 123 --~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~e 198 (211)
T 2gmw_A 123 --FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLAD 198 (211)
T ss_dssp --GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGG
T ss_pred --cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHH
Confidence 000000111123323334444443345588999999999999999964 444322 233334689988 56778
Q ss_pred HHHHHH
Q 002430 633 IISAVL 638 (923)
Q Consensus 633 i~~~i~ 638 (923)
+...+.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777663
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.49 E-value=6.2e-05 Score=80.17 Aligned_cols=67 Identities=22% Similarity=0.259 Sum_probs=56.4
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 572 ~~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
..|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-..+..+++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 4788888877654 3 45899999999999999999999999988888999999998777677777774
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00014 Score=74.90 Aligned_cols=123 Identities=13% Similarity=0.085 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|+ .|+++.++|+.........-+.+|+.... ...+.+.+.. ...-.|+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 166 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF--KKIILSEDLG-----------------VLKPRPE 166 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc--eeEEEeccCC-----------------CCCCCHH
Confidence 46789999999999 99999999999888888888888875321 1111110000 0001112
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-cChHhhhcCCeeeEeccchH--HHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAVADATD--AARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~-NDapaLk~AdVGIamg~gtd--~A~~aADivl~~~~~~~i~~~i 637 (923)
--..+.+.+.-....|.++||+. ||..|.+.|++++++.+... ..+..+|+++ +++..+..+.
T Consensus 167 ~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi--~sl~e~~~~~ 232 (240)
T 3qnm_A 167 IFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHI--HSLKELMNLL 232 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEE--SSTHHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEE--CCHHHHHHHH
Confidence 12223333332335689999996 99999999999999963222 3456799998 5676666554
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00011 Score=75.19 Aligned_cols=115 Identities=12% Similarity=-0.015 Sum_probs=78.3
Q ss_pred CCCccHHHHHHHHHhCC-CEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aG-I~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
++.|++.+.++.|++.| +++.++|+........+.+.+|+.... . .+++.-.|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f--~------------------------~~~~~~kp 158 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF--D------------------------HIEVMSDK 158 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC--S------------------------EEEEESCC
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh--h------------------------eeeecCCC
Confidence 46789999999999999 999999998888888888888874311 0 01222223
Q ss_pred hhHHHHHHHHhh----CCCEEEEEcCCc-cChHhhhcCCeeeEec-------cchHHHhhc-cCEEecCCCchhHHHHH
Q 002430 572 EHKYEIVKRLQE----RKHICGMTGDGV-NDAPALKKADIGIAVA-------DATDAARSA-SDIVLTEPGLSVIISAV 637 (923)
Q Consensus 572 ~~K~~iV~~lq~----~g~~V~m~GDG~-NDapaLk~AdVGIamg-------~gtd~A~~a-ADivl~~~~~~~i~~~i 637 (923)
|...++.+.+ ...-|.|+||+. ||..|.+.|+++.++- .+....+.. +|+++ +++..++..+
T Consensus 159 --k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 159 --TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp --SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred --CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 3344433322 335589999996 9999999999988872 222222333 48887 5677776543
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.46 E-value=8.4e-05 Score=80.63 Aligned_cols=71 Identities=27% Similarity=0.273 Sum_probs=59.0
Q ss_pred ecChh--hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEec-CCCchhHHHHHH
Q 002430 568 GVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT-EPGLSVIISAVL 638 (923)
Q Consensus 568 r~sP~--~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~-~~~~~~i~~~i~ 638 (923)
.+.|. .|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++. +++-..+..+++
T Consensus 217 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 217 EVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred EecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 34444 788888887653 3 35889999999999999999999999888888999999998 777778877774
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00016 Score=77.09 Aligned_cols=114 Identities=14% Similarity=-0.018 Sum_probs=76.1
Q ss_pred CCccHHHHHHHHHhC-CCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 494 PRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 494 lr~~~~~~I~~l~~a-GI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.. + ...+.+.+.. ...-.|+
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~-----------------~~kp~~~ 174 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVK-----------------QGKPHPE 174 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCS-----------------SCTTSSH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCC-----------------CCCCChH
Confidence 579999999999999 99999999999988888888888752 1 1111111100 0001122
Q ss_pred hHHHHHHHHhh-------CCCEEEEEcCCccChHhhhcCCeeeEe---ccc-hHHHhhccCEEecC
Q 002430 573 HKYEIVKRLQE-------RKHICGMTGDGVNDAPALKKADIGIAV---ADA-TDAARSASDIVLTE 627 (923)
Q Consensus 573 ~K~~iV~~lq~-------~g~~V~m~GDG~NDapaLk~AdVGIam---g~g-td~A~~aADivl~~ 627 (923)
--..+.+.+.- ....|.++||+.||..|++.|++++++ +.+ .+..+..||+++.+
T Consensus 175 ~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 175 PYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 22344444443 334589999999999999999977666 433 33333358998843
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00013 Score=76.45 Aligned_cols=123 Identities=13% Similarity=0.118 Sum_probs=82.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+.... ...+.+.+.. ...-.|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~~ 151 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAKR-----------------VFKPHPD 151 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc--cEEEEccccC-----------------CCCCCHH
Confidence 57899999999999 9999999999998888888999874311 1111110000 1111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccc---------------------------hHHHhhccCEEe
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA---------------------------TDAARSASDIVL 625 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~g---------------------------td~A~~aADivl 625 (923)
--..+.+.+.-....+.|+||+.||..|.+.|+++.++.+. .+..+..+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 33344444443345688999999999999999999888533 112234689988
Q ss_pred cCCCchhHHHHHH
Q 002430 626 TEPGLSVIISAVL 638 (923)
Q Consensus 626 ~~~~~~~i~~~i~ 638 (923)
+++..+...+.
T Consensus 232 --~~~~el~~~l~ 242 (253)
T 1qq5_A 232 --PALGDLPRLVR 242 (253)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 56777776663
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.44 E-value=1.9e-05 Score=80.12 Aligned_cols=119 Identities=9% Similarity=0.046 Sum_probs=77.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++. +++.++|+.....+..+.+++|+.... ...+.+. .. ....-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~-~~----------------~~~KP~~~ 142 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM--AVTISAD-DT----------------PKRKPDPL 142 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGG-GS----------------SCCTTSSH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc--cEEEecC-cC----------------CCCCCCcH
Confidence 4689999999999999 999999999988888888888764210 0011000 00 00011122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEecc----chHHHhhccCEEecCCCchhHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD----ATDAARSASDIVLTEPGLSVII 634 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~----gtd~A~~aADivl~~~~~~~i~ 634 (923)
--..+.+.+.-....|.|+||+.||.+|.+.|++++++.+ ..+..+. +|+++. ++..+.
T Consensus 143 ~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~ 205 (209)
T 2hdo_A 143 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDIL 205 (209)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGG
T ss_pred HHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHH
Confidence 2234444444334568999999999999999999999732 2333344 999884 454443
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.44 E-value=2.5e-05 Score=81.73 Aligned_cols=121 Identities=16% Similarity=0.145 Sum_probs=73.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH-HHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia-~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
++.|++.+.++.|++.|+++.++|+.........- +..|+... ++ ..+.+.+.+ .....|
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~-f~-~~~~~~~~~-----------------~~~~Kp 172 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL-FS-HIVLGDDPE-----------------VQHGKP 172 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT-SS-CEECTTCTT-----------------CCSCTT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh-ee-eEEecchhh-----------------ccCCCC
Confidence 57899999999999999999999999865544322 22333211 00 111110000 001111
Q ss_pred --hhHHHHHHHHhhCC--CEEEEEcCCccChHhhhcCC---eeeEeccchHHHhhccCEEecCCCchhHH
Q 002430 572 --EHKYEIVKRLQERK--HICGMTGDGVNDAPALKKAD---IGIAVADATDAARSASDIVLTEPGLSVII 634 (923)
Q Consensus 572 --~~K~~iV~~lq~~g--~~V~m~GDG~NDapaLk~Ad---VGIamg~gtd~A~~aADivl~~~~~~~i~ 634 (923)
+-=..+.+.+.-.. .-|.|+||+.||..|.+.|+ ++++++++.+..+..||+++. ++..+.
T Consensus 173 ~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~--sl~el~ 240 (250)
T 3l5k_A 173 DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLN--SLQDFQ 240 (250)
T ss_dssp STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECS--CGGGCC
T ss_pred ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeec--CHHHhh
Confidence 11122222222222 66899999999999999999 566667655567789999984 455543
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00019 Score=73.68 Aligned_cols=124 Identities=10% Similarity=0.072 Sum_probs=81.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++. +++.++|+.....+...-+.+|+.... ...+.+.+.. ...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 162 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF--KDIFVSEDTG-----------------FQKPMKE 162 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGTT-----------------SCTTCHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh--heEEEecccC-----------------CCCCChH
Confidence 5679999999999999 999999999988888888888875321 0111100000 0001111
Q ss_pred hHHHHHHHHh-hCCCEEEEEcCCc-cChHhhhcCCeee-Eeccc--hHHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQ-ERKHICGMTGDGV-NDAPALKKADIGI-AVADA--TDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq-~~g~~V~m~GDG~-NDapaLk~AdVGI-amg~g--td~A~~aADivl~~~~~~~i~~~i~ 638 (923)
--..+.+.+. -...-|.|+||+. ||..|.+.|+++. .+..| .+..+..+|+++ +++..+...+.
T Consensus 163 ~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~ 231 (238)
T 3ed5_A 163 YFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEI--RKLEELYHILN 231 (238)
T ss_dssp HHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred HHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence 1122223332 2224689999998 9999999999954 44433 445566899998 56778877664
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0002 Score=74.45 Aligned_cols=122 Identities=13% Similarity=0.138 Sum_probs=77.6
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhh
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 573 (923)
+.|++.+.++.|++.|+++.++|+.....+..+-+++|+. . +. ..+.+.... ...-.|+-
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~-f~-~~~~~~~~~-----------------~~Kp~p~~ 170 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S-FD-FALGEKSGI-----------------RRKPAPDM 170 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T-CS-EEEEECTTS-----------------CCTTSSHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c-ee-EEEecCCCC-----------------CCCCCHHH
Confidence 5689999999999999999999999888888888888874 2 11 111111000 00001111
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee---eEeccc--hHHHhhccCEEecCCCchhHHHHH
Q 002430 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIG---IAVADA--TDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 574 K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG---Iamg~g--td~A~~aADivl~~~~~~~i~~~i 637 (923)
=..+.+.+.-...-|.|+||+.||..|.+.|++. ++++.+ .+.....+|+++ +++..+...+
T Consensus 171 ~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 171 TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 1223333333345689999999999999999994 334432 233334689888 4566665544
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.43 E-value=8.3e-05 Score=79.96 Aligned_cols=66 Identities=24% Similarity=0.326 Sum_probs=56.1
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
+|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-..+..+++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 688877777653 3 35899999999999999999999999888888999999998777777877774
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00016 Score=73.97 Aligned_cols=122 Identities=9% Similarity=0.065 Sum_probs=77.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE--ecC
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA--GVF 570 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa--r~s 570 (923)
++.+++.+.++.++. ++.++|+........+.+++|+... .+.....+. .. . .. .-.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~-~~~~~~~~~------------~~-~----~~~~kpk 145 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPY-FAPHIYSAK------------DL-G----ADRVKPK 145 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGG-TTTCEEEHH------------HH-C----TTCCTTS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHh-ccceEEecc------------cc-c----cCCCCcC
Confidence 456788888888774 9999999998888888888887421 101111000 00 0 00 011
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee-eEeccchH-------HHhhc-cCEEecCCCchhHHHHH
Q 002430 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADATD-------AARSA-SDIVLTEPGLSVIISAV 637 (923)
Q Consensus 571 P~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG-Iamg~gtd-------~A~~a-ADivl~~~~~~~i~~~i 637 (923)
|+--..+.+.+.-....|.++||+.||.+|++.|+++ |+++.+.+ ..++. ||+++ +++..+...+
T Consensus 146 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l 219 (229)
T 2fdr_A 146 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVI 219 (229)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHH
T ss_pred HHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceee--cCHHHHHHHH
Confidence 2222334444443345688999999999999999998 77765433 24555 99998 4566766655
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00026 Score=70.80 Aligned_cols=87 Identities=11% Similarity=0.085 Sum_probs=64.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCC-hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe--c
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--V 569 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~-~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar--~ 569 (923)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+... |.. .
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~------------------------------f~~~~~ 117 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRY------------------------------FVHREI 117 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTT------------------------------EEEEEE
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhh------------------------------cceeEE
Confidence 578999999999999999999999998 6889999999998531 111 1
Q ss_pred ChhhHHHHH----HHHhhCCCEEEEEcCCccChHhhhcCCeeeE
Q 002430 570 FPEHKYEIV----KRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (923)
Q Consensus 570 sP~~K~~iV----~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa 609 (923)
.+..|.... +.+.-....+.|+||+.||+.+.++|++...
T Consensus 118 ~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 118 YPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp SSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred EeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 222333332 3332233458899999999999999987543
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00017 Score=71.60 Aligned_cols=105 Identities=12% Similarity=0.018 Sum_probs=67.6
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEec--Ch
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV--FP 571 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~--sP 571 (923)
+.|++.+.++.|++.|+++.++|++.. .+....+++|+.... ...+.+.+ +.+. .|
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f--~~~~~~~~-------------------~~~~kp~~ 140 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF--TEVVTSSS-------------------GFKRKPNP 140 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE--EEEECGGG-------------------CCCCTTSC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe--eeeeeccc-------------------cCCCCCCH
Confidence 679999999999999999999998865 466777778874211 00010000 0111 12
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccC
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 622 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aAD 622 (923)
+--..+.+.+.-. .|.++||+.||.+|++.|++++++.+.....++..+
T Consensus 141 ~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 141 ESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 2223333333322 588999999999999999999888644444444443
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00013 Score=73.34 Aligned_cols=120 Identities=9% Similarity=0.082 Sum_probs=79.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+ ++.|++. +++.++|+.....+..+.+++|+.... ...+.+.+.. ...-.|+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 132 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF--KGIFSAESVK-----------------EYKPSPK 132 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTCHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC--cEEEehhhcC-----------------CCCCCHH
Confidence 46789999 9999999 999999999988888888899974321 1111110000 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe-cc---chHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-AD---ATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam-g~---gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
--..+.+.+. ...+.|+||+.||..|.++|+++..+ .. +.+.....+|+++ +++..+...+
T Consensus 133 ~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 197 (201)
T 2w43_A 133 VYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIV--NDFKELYEWI 197 (201)
T ss_dssp HHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 3344555555 45688999999999999999999776 22 2222234689887 4576666555
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.40 E-value=7e-05 Score=79.67 Aligned_cols=72 Identities=26% Similarity=0.305 Sum_probs=59.0
Q ss_pred EecChh--hHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 567 AGVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 567 ar~sP~--~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
..+.|. .|...++.+.+. ...|.++||+.||.+|++.|++|++|+++.+..++.||+++.+++-..+..+++
T Consensus 182 ~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 344454 788888877653 245899999999999999999999999888888889999998877777877764
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00021 Score=74.12 Aligned_cols=121 Identities=11% Similarity=0.083 Sum_probs=82.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++. +++.++|+........+.+.+|+.-+ .+.+.+. +....|.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~-----~~~~~~~------------------~~~~kp~ 171 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD-----VIIGSDI------------------NRKYKPD 171 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS-----CCCCHHH------------------HTCCTTS
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee-----EEEEcCc------------------CCCCCCC
Confidence 5679999999999997 99999999999989899999998411 1111100 0011121
Q ss_pred --hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchH---------H-HhhccCEEecCCCchhHHHHHHH
Q 002430 573 --HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATD---------A-ARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 573 --~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd---------~-A~~aADivl~~~~~~~i~~~i~~ 639 (923)
-=..+.+.+.-...-|.|+||+.||..|.+.|+++++|.+... . .+..+|+++ +++..+...+..
T Consensus 172 ~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 172 PQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 1112222222223568999999999999999999999963111 1 256789998 678888877753
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00016 Score=75.40 Aligned_cols=121 Identities=13% Similarity=0.079 Sum_probs=82.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++. +++.++|+........+.+.+|+.- ..+...+. .. ...-.|+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f-----~~~~~~~~------------~~----~~kp~~~ 177 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW-----DMLLCADL------------FG----HYKPDPQ 177 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC-----SEECCHHH------------HT----CCTTSHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc-----ceEEeecc------------cc----cCCCCHH
Confidence 4678999999999985 9999999999888888889999741 11111100 00 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEecc-----chH---H--HhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD-----ATD---A--ARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~-----gtd---~--A~~aADivl~~~~~~~i~~~i 637 (923)
-=..+.+.+.-...-|.|+||+.||..|.+.|+++++|.+ |.. . .+..+|+++ +++..++..+
T Consensus 178 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l 250 (254)
T 3umc_A 178 VYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQL 250 (254)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHh
Confidence 2233444443334568999999999999999999999964 221 1 256789998 5687877766
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00011 Score=77.00 Aligned_cols=66 Identities=18% Similarity=0.166 Sum_probs=54.3
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhc-------cCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSA-------SDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~a-------ADivl~~~~~~~i~~~i~ 638 (923)
.|...++.+.+. | ..|.++||+.||.+|++.|++|++|+++.+..++. ||++..+++-..+..+++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 687777777653 2 35899999999999999999999999888888875 889988777777777764
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00021 Score=71.67 Aligned_cols=137 Identities=15% Similarity=0.094 Sum_probs=89.4
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCCh---HHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQL---AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~---~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
-++.||+.++++.|++.|+++.++|+-.. ..+..+-+.+|+.... ..++...+... ...+..
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~-------------~~~~~K 97 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF--DFIYASNSELQ-------------PGKMEK 97 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE--EEEEECCTTSS-------------TTCCCT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe--EEEEEcccccc-------------ccCCCC
Confidence 36889999999999999999999998775 7888888999985311 01111000000 000111
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCC-ccChHhhhcCCeeeEe-ccchHH------HhhccCEEecCCCchhHHHHHHHh
Q 002430 569 VFPEHKYEIVKRLQERKHICGMTGDG-VNDAPALKKADIGIAV-ADATDA------ARSASDIVLTEPGLSVIISAVLTS 640 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g~~V~m~GDG-~NDapaLk~AdVGIam-g~gtd~------A~~aADivl~~~~~~~i~~~i~~g 640 (923)
-.|+--..+.+.+.-....+.|+||. .+|..+-++|++.... ..+... ....+|.++...++..+..+++..
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 22333344555554444568999999 7999999999987544 332211 112789999766899999888765
Q ss_pred HHH
Q 002430 641 RAI 643 (923)
Q Consensus 641 R~~ 643 (923)
+.-
T Consensus 178 ~~~ 180 (189)
T 3ib6_A 178 KKI 180 (189)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00019 Score=73.69 Aligned_cols=122 Identities=13% Similarity=0.117 Sum_probs=79.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++ |+++.++|+..........+.++- .+ ...+. .+ +. ....-.|+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~---~f-d~i~~-~~-----------~~-----~~~KP~~~ 156 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV---EF-DHIIT-AQ-----------DV-----GSYKPNPN 156 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS---CC-SEEEE-HH-----------HH-----TSCTTSHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC---cc-CEEEE-cc-----------cc-----CCCCCCHH
Confidence 678999999999999 899999999887766666554331 11 11111 00 00 01122344
Q ss_pred hHHHHHHHHhhC---CCEEEEEcCCc-cChHhhhcCCeeeEeccch-----------HHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADIGIAVADAT-----------DAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~---g~~V~m~GDG~-NDapaLk~AdVGIamg~gt-----------d~A~~aADivl~~~~~~~i~~~i 637 (923)
-....++.+++. ...|.|+||+. ||..|.++|++++++.+.. +..+..+|+++ +++..++..+
T Consensus 157 ~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l 234 (240)
T 3smv_A 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAH 234 (240)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHH
Confidence 334453334433 35689999996 9999999999999994211 23346899998 5677777766
Q ss_pred H
Q 002430 638 L 638 (923)
Q Consensus 638 ~ 638 (923)
.
T Consensus 235 ~ 235 (240)
T 3smv_A 235 K 235 (240)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00024 Score=72.16 Aligned_cols=115 Identities=10% Similarity=0.092 Sum_probs=77.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++ |+++.++|+.....+..+-+++|+.... . .+ +.+.-.+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f--~-~i----------------------~~~~~~~K 137 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF--D-GI----------------------YGSSPEAP 137 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC--S-EE----------------------EEECSSCC
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe--e-ee----------------------ecCCCCCC
Confidence 467999999999999 9999999998888888888888885311 0 01 11110112
Q ss_pred hHHHHHH-HHhhCC---CEEEEEcCCccChHhhhcCCe---eeEeccc-hHHHh-hccCEEecCCCchhHHH
Q 002430 573 HKYEIVK-RLQERK---HICGMTGDGVNDAPALKKADI---GIAVADA-TDAAR-SASDIVLTEPGLSVIIS 635 (923)
Q Consensus 573 ~K~~iV~-~lq~~g---~~V~m~GDG~NDapaLk~AdV---GIamg~g-td~A~-~aADivl~~~~~~~i~~ 635 (923)
-|-++.+ .+++.| .-+.|+||+.||+.|.++|++ |++++.+ .+..+ ..+|+++. ++..+..
T Consensus 138 p~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~--~~~el~~ 207 (210)
T 2ah5_A 138 HKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLA 207 (210)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHH
T ss_pred CChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHH
Confidence 2333333 333333 458999999999999999998 6666644 32333 36899984 4555543
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00017 Score=76.17 Aligned_cols=124 Identities=15% Similarity=0.194 Sum_probs=82.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.++++.|++.|+++.++|+.... ...+-+.+|+.... ...+. .+.. ....-.|+
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f--~~~~~-~~~~----------------~~~Kp~~~ 165 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF--DFVLT-SEAA----------------GWPKPDPR 165 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC--SCEEE-HHHH----------------SSCTTSHH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh--hEEEe-eccc----------------CCCCCCHH
Confidence 36799999999999999999999987664 57777888874321 01110 0000 01112233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-cChHhhhcCCeeeEec-cch--HH---HhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAVA-DAT--DA---ARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~-NDapaLk~AdVGIamg-~gt--d~---A~~aADivl~~~~~~~i~~~i~ 638 (923)
--..+.+.+.-....|.|+||+. ||..|.++|+++.++. .+. .. ....+|+++ +++..++..+.
T Consensus 166 ~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~ 236 (263)
T 3k1z_A 166 IFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHH
Confidence 34445555544456689999997 9999999999999985 221 11 223689998 56777777664
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00079 Score=70.16 Aligned_cols=117 Identities=15% Similarity=0.055 Sum_probs=79.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecC--
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF-- 570 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~s-- 570 (923)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+.... . .+++.-.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-------------------------~i~~~~kp~ 164 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF-P-------------------------RIEVVSEKD 164 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC-C-------------------------CEEEESCCS
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC-c-------------------------eeeeeCCCC
Confidence 46799999999999 99999999999988888888888874311 0 0122222
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCc-cChHhhhcCCeeeEe-ccchH--------HHhhccCE-EecCCCchhHHHHHH
Q 002430 571 PEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAV-ADATD--------AARSASDI-VLTEPGLSVIISAVL 638 (923)
Q Consensus 571 P~~K~~iV~~lq~~g~~V~m~GDG~-NDapaLk~AdVGIam-g~gtd--------~A~~aADi-vl~~~~~~~i~~~i~ 638 (923)
|+--..+.+.+.-....|.++||+. ||..|.+.|++++++ ..|.. .....+|+ ++ +++..+...+.
T Consensus 165 ~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 165 PQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 2222334444443445689999999 999999999999876 33321 11345787 66 56777776653
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00027 Score=74.64 Aligned_cols=67 Identities=25% Similarity=0.298 Sum_probs=53.2
Q ss_pred hhHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 572 EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 572 ~~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
..|...++.+.++ ...|.++||+.||.+|++.|++|++|+++.+..+..||+++.+.+-..+..+++
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 3677766666543 245889999999999999999999999888888899999986655455777664
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00077 Score=67.43 Aligned_cols=102 Identities=16% Similarity=0.137 Sum_probs=69.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.| ++.++|+........+.+.+|+.... ...+.+.+ . ....-.|+
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f--~~~~~~~~------------~-----~~~Kp~~~ 145 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL--LAFFTSSA------------L-----GVMKPNPA 145 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC--SCEEEHHH------------H-----SCCTTCHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc--ceEEeecc------------c-----CCCCCCHH
Confidence 36799999999999999 99999999998888888888874321 01111000 0 01111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-cch
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DAT 614 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~gt 614 (923)
--..+.+.+.-....|.|+||+.||..|.+.|++...+- .+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 188 (200)
T 3cnh_A 146 MYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAA 188 (200)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCHH
T ss_pred HHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCch
Confidence 333444555434456899999999999999999988774 443
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00019 Score=75.44 Aligned_cols=55 Identities=24% Similarity=0.207 Sum_probs=44.5
Q ss_pred hhHHHHHHHHhhC-----CCEEEEEcCCccChHhhhcCCeeeEeccch-HHHhhccCEEec
Q 002430 572 EHKYEIVKRLQER-----KHICGMTGDGVNDAPALKKADIGIAVADAT-DAARSASDIVLT 626 (923)
Q Consensus 572 ~~K~~iV~~lq~~-----g~~V~m~GDG~NDapaLk~AdVGIamg~gt-d~A~~aADivl~ 626 (923)
-.|..-++.+.+. ..-|+++||+.||.+||+.|++||+|+++. +..++.||+++.
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~ 238 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDV 238 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEec
Confidence 4687777766543 357999999999999999999999999887 656777887753
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.00028 Score=71.35 Aligned_cols=100 Identities=6% Similarity=-0.005 Sum_probs=65.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH------hCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeE
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR------LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF 566 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~------~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 566 (923)
++.|++.+.++.|++ |+++.++|+........+.+. .|+.... ...+.+. +. ..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f--~~~~~~~------------~~-----~~ 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF--DKVYASC------------QM-----GK 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS--SEEEEHH------------HH-----TC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc--CeEEeec------------cc-----CC
Confidence 467899999999999 999999999887776666555 4542110 0000000 00 01
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEecc
Q 002430 567 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (923)
Q Consensus 567 ar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~ 612 (923)
..-.|+--..+.+.+.-....|.|+||+.||..|.+.|+++..+.+
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~ 194 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPD 194 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCC
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEEC
Confidence 1112323334444444344568999999999999999999998864
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0029 Score=66.71 Aligned_cols=123 Identities=11% Similarity=0.124 Sum_probs=80.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.++++.|++ |+++.++|+.....+..+.+.+|+.... ...+.+.+.. ...-.|+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~KP~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQK-----------------EEKPAPS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGSS-----------------SCTTCHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh--heEEecCCCC-----------------CCCCCHH
Confidence 577999999999998 6999999999988888888999985321 1111111000 0111232
Q ss_pred hHHHHHHHHhhCCCEEEEEcC-CccChHhhhcCCe--eeEeccchH---HHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGD-GVNDAPALKKADI--GIAVADATD---AARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GD-G~NDapaLk~AdV--GIamg~gtd---~A~~aADivl~~~~~~~i~~~i 637 (923)
--..+.+.+.-....+.|+|| ..||..+-++|++ .|.+..+.. .....+|+++ +++..+...+
T Consensus 181 ~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~l 249 (260)
T 2gfh_A 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALL 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEE--CCHHHHHHHH
Confidence 223344444433456899999 5999999999999 677753321 1234588887 4577776655
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0044 Score=62.67 Aligned_cols=124 Identities=17% Similarity=0.151 Sum_probs=77.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.++++.|++.|+++.++|+.....+...-+.+|+.... + ..+...+.. ...-.|+
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f-d-~~~~~~~~~-----------------~~KP~p~ 144 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF-D-VMVFGDQVK-----------------NGKPDPE 144 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-S-EEECGGGSS-----------------SCTTSTH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc-c-ccccccccC-----------------CCcccHH
Confidence 35789999999999999999999999999999999999985321 1 111110000 1111232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeee--Ee--c-cchHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI--AV--A-DATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGI--am--g-~gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
-=..+.+.+.-...-|.|+||..+|..+-++|++.- ++ | +..+.-+++.+.++.+ ...++..+
T Consensus 145 ~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~--~~eli~~l 212 (216)
T 3kbb_A 145 IYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVK--PEEILNVL 212 (216)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEEC--GGGHHHHH
T ss_pred HHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECC--HHHHHHHH
Confidence 223344444434456899999999999999999752 23 3 2233333443334433 34555554
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=96.54 E-value=0.019 Score=56.09 Aligned_cols=133 Identities=12% Similarity=0.059 Sum_probs=79.3
Q ss_pred cccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhh--hcCceeEEeecCCCCCcceEEEE
Q 002430 339 LTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEA--RAGVREVHFLPFNPVDKRTALTY 416 (923)
Q Consensus 339 LT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~--~~~~~~l~~~~F~s~~k~~sv~~ 416 (923)
||+|++.|.++.......+.+.++++.+++..+..++ ||+..||++++...... ....+..+.+|- +-+...+
T Consensus 1 LT~G~p~V~~v~~~~~~~~~~~~~lL~laaslE~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~G----~Gv~a~v 75 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSE-HPLGVAVTKYCKEELGTETLGYCTDFQAVPG----CGIGCKV 75 (165)
T ss_dssp CCCCCCCEEEEEECCCTTTSCHHHHHHHHHHHHTTSC-STTHHHHHHHHHHHHTCCCCCCEEEEEEETT----TEEEEEE
T ss_pred CCCceeEEEEEEeeCCcCCCCHHHHHHHHHHHHccCC-ChHHHHHHHHHHHhcCCCCCCCcCceEEecC----ccEEEEE
Confidence 8999999988653110012467788888888776665 99999999876321000 011222333321 1222222
Q ss_pred Eec------------------------------CCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEE
Q 002430 417 IDS------------------------------DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVA 466 (923)
Q Consensus 417 ~~~------------------------------~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A 466 (923)
... ..+.+.+.-|+++.+-+..- ...+.+...+..+..+|..++.+|
T Consensus 76 ~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~~~~~~~~~~~~~~~~G~T~v~va 152 (165)
T 2arf_A 76 SNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGL---TISSDVSDAMTDHEMKGQTAILVA 152 (165)
T ss_dssp ECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHC---SSCHHHHHHHHHHHTTTSEEEEEE
T ss_pred cCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCC---CCCHHHHHHHHHHHhCCCeEEEEE
Confidence 211 01224667799998754211 111234445566778899999999
Q ss_pred eeecCCCCCCCCCCCceEEEEeccCC
Q 002430 467 RQEIPEKTKESPGAPWQLVGLLPLFD 492 (923)
Q Consensus 467 ~~~~~~~~~~~~e~~l~llG~i~i~D 492 (923)
... +++|++++.|
T Consensus 153 ~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 153 IDG-------------VLCGMIAIAD 165 (165)
T ss_dssp ETT-------------EEEEEEEECC
T ss_pred ECC-------------EEEEEEEEEC
Confidence 865 7999999987
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0052 Score=61.89 Aligned_cols=119 Identities=10% Similarity=0.029 Sum_probs=72.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.++++.|++.|+++.++||.....+..+.. . +...++.+.+.. ...-.|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~----~~d~v~~~~~~~-----------------~~KP~p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---P----VNDWMIAAPRPT-----------------AGWPQPD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---T----TTTTCEECCCCS-----------------SCTTSTH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---c----cCCEEEECCcCC-----------------CCCCChH
Confidence 577999999999999999999999988776644332 1 111111111000 0111122
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCccChHhhhcCCe-eeEeccch---------------------------HHHhhccCE
Q 002430 573 HKYEIVKRLQER-KHICGMTGDGVNDAPALKKADI-GIAVADAT---------------------------DAARSASDI 623 (923)
Q Consensus 573 ~K~~iV~~lq~~-g~~V~m~GDG~NDapaLk~AdV-GIamg~gt---------------------------d~A~~aADi 623 (923)
-=....+.+.-. ...+.|+||..+|+.+-++|++ .|++..|. +.....+|+
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~ 171 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHS 171 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCE
Confidence 212233333322 2458899999999999999997 45554221 111235899
Q ss_pred EecCCCchhHHHHH
Q 002430 624 VLTEPGLSVIISAV 637 (923)
Q Consensus 624 vl~~~~~~~i~~~i 637 (923)
++ +++..+...+
T Consensus 172 vi--~~~~eL~~~l 183 (196)
T 2oda_A 172 VI--DHLGELESCL 183 (196)
T ss_dssp EE--SSGGGHHHHH
T ss_pred Ee--CCHHHHHHHH
Confidence 98 5677877666
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0014 Score=61.12 Aligned_cols=96 Identities=15% Similarity=0.154 Sum_probs=63.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.++++.|++.|+++.++|+.....+..+.+++|+.... ...+...+ . ....-.|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~------------~-----~~~Kp~~~ 78 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV--DKVLLSGE------------L-----GVEKPEEA 78 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS--SEEEEHHH------------H-----SCCTTSHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc--cEEEEecc------------C-----CCCCCCHH
Confidence 46789999999999999999999999888877777888874321 01110000 0 01111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
--..+.+.+.-....+.|+||+.+|..+.++|++-
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLV 113 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCE
Confidence 22333344433334588999999999999999874
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0034 Score=63.93 Aligned_cols=117 Identities=20% Similarity=0.206 Sum_probs=72.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.++++.|++. +++.++|+.... -+.+|+.... . .+.+.+ .. ....-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f--~-~~~~~~-----------~~-----~~~kp~~~ 159 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF--A-FALCAE-----------DL-----GIGKPDPA 159 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC--S-EEEEHH-----------HH-----TCCTTSHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe--e-eeEEcc-----------cc-----CCCCcCHH
Confidence 4678999999999998 999999987654 2334442110 0 000000 00 00111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-cChHhhhcCCeeeEe-cc---chHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAV-AD---ATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~-NDapaLk~AdVGIam-g~---gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
--..+.+.+.-....|.|+||+. ||..|.+.|+++.++ .. ..+. ...+|+++ +++..+...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l 226 (230)
T 3vay_A 160 PFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVL 226 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHH
Confidence 22344444443445689999998 999999999998887 22 1122 56789998 5678877766
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.26 E-value=0.00026 Score=71.13 Aligned_cols=93 Identities=5% Similarity=-0.022 Sum_probs=59.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH-hCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE----
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA---- 567 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~-~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa---- 567 (923)
++.|++.+.++.|++.|+++.++|+........+.+. +|+ ..... .+++
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l------------------------~~~f~--~~~~~~~~ 144 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEI------------------------RDAAD--HIYLSQDL 144 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHH------------------------HHHCS--EEEEHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccCh------------------------hhhee--eEEEeccc
Confidence 4679999999999999999999998654332211111 121 11110 0111
Q ss_pred ---ecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec
Q 002430 568 ---GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611 (923)
Q Consensus 568 ---r~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg 611 (923)
.-.|+--..+.+.+.-....+.|+||+.||..|.+.|++...+.
T Consensus 145 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 191 (206)
T 2b0c_A 145 GMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 191 (206)
T ss_dssp TCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEC
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEe
Confidence 11233334455555444456899999999999999999988775
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0016 Score=68.85 Aligned_cols=57 Identities=19% Similarity=0.284 Sum_probs=47.5
Q ss_pred hhHHHHHHHHh-hCCCEEEEEcC----CccChHhhhcCC-eeeEeccchHHHhhccCEEecCC
Q 002430 572 EHKYEIVKRLQ-ERKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVLTEP 628 (923)
Q Consensus 572 ~~K~~iV~~lq-~~g~~V~m~GD----G~NDapaLk~Ad-VGIamg~gtd~A~~aADivl~~~ 628 (923)
-.|..-++.|. -...-|.++|| |.||.+||+.|+ +|+||+++.+..++.||+|...+
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPET 258 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCC
Confidence 36888888881 11357999999 999999999999 69999999999999999987544
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0024 Score=71.26 Aligned_cols=133 Identities=14% Similarity=0.125 Sum_probs=80.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCC-CcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-SSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
++.||+.++++.|+++|+++.++|+-....+..+-+.+|+... +.. .++.+.+... ..+......- +..|
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~-Fd~~~Ivs~ddv~~------~~~~~~~~kp--~~KP 285 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY-FEADFIATASDVLE------AENMYPQARP--LGKP 285 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGG-SCGGGEECHHHHHH------HHHHSTTSCC--CCTT
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHh-cCCCEEEecccccc------cccccccccC--CCCC
Confidence 6789999999999999999999999999888888889998532 110 1221111000 0000000000 0112
Q ss_pred hhHHHHHHHHhhC-----------------CCEEEEEcCCccChHhhhcCCee-eEeccch-------HHHhhccCEEec
Q 002430 572 EHKYEIVKRLQER-----------------KHICGMTGDGVNDAPALKKADIG-IAVADAT-------DAARSASDIVLT 626 (923)
Q Consensus 572 ~~K~~iV~~lq~~-----------------g~~V~m~GDG~NDapaLk~AdVG-Iamg~gt-------d~A~~aADivl~ 626 (923)
.-. -+..++++. ...|.|+||+.+|..|-++|++. |++..|. +.....||+++
T Consensus 286 ~P~-~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi- 363 (384)
T 1qyi_A 286 NPF-SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI- 363 (384)
T ss_dssp STH-HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE-
T ss_pred CHH-HHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE-
Confidence 111 112222222 25689999999999999999976 4444321 22234689998
Q ss_pred CCCchhHHHHH
Q 002430 627 EPGLSVIISAV 637 (923)
Q Consensus 627 ~~~~~~i~~~i 637 (923)
+++..+...+
T Consensus 364 -~sl~eL~~~l 373 (384)
T 1qyi_A 364 -NHLGELRGVL 373 (384)
T ss_dssp -SSGGGHHHHH
T ss_pred -CCHHHHHHHH
Confidence 5677777665
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.19 E-value=0.00074 Score=69.18 Aligned_cols=106 Identities=20% Similarity=0.064 Sum_probs=62.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCCh---------------HHHHHHHHHhCCCCCCCCCCcccCcccccccCcchH
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV 556 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~---------------~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~ 556 (923)
.++.|++.+++++|++.|+++.++|+... .....+.+++|+.-+. ........+..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~---~~~~~~~~~g~~~---- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDM---VLACAYHEAGVGP---- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSE---EEEECCCTTCCST----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceee---EEEeecCCCCcee----
Confidence 46789999999999999999999999887 5677778888873110 0000000000000
Q ss_pred HHHhhhcCeEEecChh--hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeee
Q 002430 557 DELIEKADGFAGVFPE--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (923)
Q Consensus 557 ~~~~~~~~vfar~sP~--~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGI 608 (923)
+..+....-.|. -=..+.+.+.-....++|+||+.||..+.+.|++..
T Consensus 128 ----~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 ----LAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp ----TCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred ----ecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 000000000111 111223333323345889999999999999999764
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.0081 Score=62.94 Aligned_cols=84 Identities=15% Similarity=0.074 Sum_probs=63.8
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCCh----HHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~----~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
.++.|++.+.++.|++.|+++.++||-.. ..+..--+++||.... .. .++-
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~--~~-----------------------~Lil 154 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVN--DK-----------------------TLLL 154 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCS--TT-----------------------TEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccc--cc-----------------------eeEe
Confidence 56789999999999999999999999754 4666677788985310 00 1233
Q ss_pred ecChhhHHHHHHHHhhC-CCEEEEEcCCccChHh
Q 002430 568 GVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPA 600 (923)
Q Consensus 568 r~sP~~K~~iV~~lq~~-g~~V~m~GDG~NDapa 600 (923)
|-...+|....+.+++. -.+|+++||-.+|.++
T Consensus 155 r~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 155 KKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 33346788888888884 4678999999999987
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.99 E-value=0.0018 Score=67.59 Aligned_cols=52 Identities=19% Similarity=0.262 Sum_probs=42.0
Q ss_pred hHHHHHHHH-hhCCCEEEEEcC----CccChHhhhcCCe-eeEeccchHHHhhccCEE
Q 002430 573 HKYEIVKRL-QERKHICGMTGD----GVNDAPALKKADI-GIAVADATDAARSASDIV 624 (923)
Q Consensus 573 ~K~~iV~~l-q~~g~~V~m~GD----G~NDapaLk~AdV-GIamg~gtd~A~~aADiv 624 (923)
+|..-++.| .-...-|.++|| |.||.+||+.|+. |++|+++.+..|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 677777776 112457999999 9999999999987 999999999999999986
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0027 Score=65.13 Aligned_cols=101 Identities=9% Similarity=-0.025 Sum_probs=65.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH------hCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeE
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR------LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF 566 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~------~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 566 (923)
++.|++.++++.|++. +++.++|+........+.+. .|+.... ...+ +. . +. ..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f--d~i~-~~--------~---~~-----~~ 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF--EKTY-LS--------Y---EM-----KM 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC--SEEE-EH--------H---HH-----TC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhC--CEEE-ee--------c---cc-----CC
Confidence 4669999999999999 99999999988877766533 3331100 0000 00 0 00 01
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccc
Q 002430 567 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA 613 (923)
Q Consensus 567 ar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~g 613 (923)
..-.|+-=..+.+.+.-....|.|+||+.||..|.++|+++..+.++
T Consensus 172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~ 218 (229)
T 4dcc_A 172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKA 218 (229)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECC
Confidence 11223333445555544445689999999999999999999888643
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.65 E-value=0.01 Score=62.29 Aligned_cols=84 Identities=14% Similarity=0.059 Sum_probs=62.4
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCCh----HHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~----~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
+++.|++.+.++.|++.|+++.++||-.. ..+..--+++||..- ..+ .++-
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~--~~~-----------------------~Lil 154 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGV--EES-----------------------AFYL 154 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCC--SGG-----------------------GEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcc--ccc-----------------------ceec
Confidence 56789999999999999999999998754 466666778898531 000 1233
Q ss_pred ecChhhHHHHHHHHhhCC-CEEEEEcCCccChHh
Q 002430 568 GVFPEHKYEIVKRLQERK-HICGMTGDGVNDAPA 600 (923)
Q Consensus 568 r~sP~~K~~iV~~lq~~g-~~V~m~GDG~NDapa 600 (923)
|-.-..|....+.+++.| .+|+++||-.+|.++
T Consensus 155 r~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 155 KKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp ESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 323356777888887774 578999999999886
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.015 Score=60.67 Aligned_cols=116 Identities=10% Similarity=0.097 Sum_probs=74.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.+.|+-. .+..+-+.+|+.... ..++.+.+.. ...-.|+
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F--d~i~~~~~~~-----------------~~KP~p~ 174 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF--DFIADAGKCK-----------------NNKPHPE 174 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC--SEECCGGGCC-----------------SCTTSSH
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc--ceeecccccC-----------------CCCCcHH
Confidence 567999999999999999998877654 355667888985421 1111111100 1111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEeccchHHHhhccCEEecCCCchhH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVI 633 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~gtd~A~~aADivl~~~~~~~i 633 (923)
-=..+.+.+.-...-|.|+||..+|..|-++|++ .|++++..+. ..||+++- ++..+
T Consensus 175 ~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~--~~ad~vi~--~l~eL 232 (250)
T 4gib_A 175 IFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENL--KKANLVVD--STNQL 232 (250)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTT--TTSSEEES--SGGGC
T ss_pred HHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHh--ccCCEEEC--ChHhC
Confidence 3334455554444568999999999999999997 5666544333 35899984 45554
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.57 E-value=0.0088 Score=62.91 Aligned_cols=43 Identities=19% Similarity=0.283 Sum_probs=34.2
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEcc---CChHHHHHHHHHhCCC
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 533 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTG---D~~~tA~~ia~~~Gi~ 533 (923)
.+.+-|++.++|++++++|+++.++|| ..........+++|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 455567899999999999999999999 4555555566777774
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.45 E-value=0.031 Score=58.63 Aligned_cols=42 Identities=12% Similarity=0.090 Sum_probs=33.2
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcc---CChHHHHHHHHHhCCC
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 533 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTG---D~~~tA~~ia~~~Gi~ 533 (923)
+.+-+++.++|++++++|++++++|| ..........+++|+.
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 33447899999999999999999999 5555566666778874
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.24 E-value=0.032 Score=57.10 Aligned_cols=113 Identities=11% Similarity=0.102 Sum_probs=71.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.++++.|++.| ++.++|+-....+..+.+++|+.... . . .+... .
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f-~-----------------------~-~~~~~---~ 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEV-E-----------------------G-RVLIY---I 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHT-T-----------------------T-CEEEE---S
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhc-C-----------------------e-eEEec---C
Confidence 57899999999999999 99999999888888888888874210 0 0 01111 1
Q ss_pred hHHHHHHHHhh--CCCEEEEEcCCcc---ChHhhhcCCee-eEeccc----h-HHHhhc--cCEEecCCCchhHHHH
Q 002430 573 HKYEIVKRLQE--RKHICGMTGDGVN---DAPALKKADIG-IAVADA----T-DAARSA--SDIVLTEPGLSVIISA 636 (923)
Q Consensus 573 ~K~~iV~~lq~--~g~~V~m~GDG~N---DapaLk~AdVG-Iamg~g----t-d~A~~a--ADivl~~~~~~~i~~~ 636 (923)
.|..+.+.+.+ ....+.|+||+.| |..+-++|++- |.+..| . +..++. +|+++ +++..+...
T Consensus 147 ~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i--~~~~el~~~ 221 (231)
T 2p11_A 147 HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTV--ERIGDLVEM 221 (231)
T ss_dssp SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEE--SSGGGGGGC
T ss_pred ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceee--cCHHHHHHH
Confidence 23223333332 3457999999999 55555667653 333332 1 222333 89988 445555443
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.11 E-value=0.069 Score=57.21 Aligned_cols=97 Identities=10% Similarity=-0.018 Sum_probs=66.7
Q ss_pred ccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHH---HHHHHH--------hCCCCCCCCCCcccCcccccccCcchHH
Q 002430 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIG---KETGRR--------LGMGTNMYPSSSLLGQDKDASIAALPVD 557 (923)
Q Consensus 489 ~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA---~~ia~~--------~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 557 (923)
..++++.|++.++++.|++.|+++.++||-....+ ...-+. .|+.. ..+.+.+..
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~--------- 249 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-----VMQCQREQG--------- 249 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-----SEEEECCTT---------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCc-----hheeeccCC---------
Confidence 34678999999999999999999999999875432 222333 67721 111111110
Q ss_pred HHhhhcCeEEecChhhHHHHHHHHhhCC-CEEEEEcCCccChHhhhcCCee
Q 002430 558 ELIEKADGFAGVFPEHKYEIVKRLQERK-HICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 558 ~~~~~~~vfar~sP~~K~~iV~~lq~~g-~~V~m~GDG~NDapaLk~AdVG 607 (923)
-.+-.|+-|..+.+.+.... ..++|+||..+|+.|-++|++-
T Consensus 250 --------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 250 --------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp --------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred --------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCe
Confidence 01223777888888875444 3568999999999999999875
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.07 E-value=0.022 Score=57.81 Aligned_cols=95 Identities=11% Similarity=0.034 Sum_probs=60.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.++++.|++.|+++.++|+.... +..+.+++|+.... ...+.+.+ . ....-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~~~f--~~~~~~~~---------~--------~~~Kp~~~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLKKYF--DALALSYE---------I--------KAVKPNPK 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCGGGC--SEEC----------------------------CC
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcHhHe--eEEEeccc---------c--------CCCCCCHH
Confidence 46799999999999999999999998664 67788888875311 11111000 0 01112232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcc-ChHhhhcCCeeeEe
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVN-DAPALKKADIGIAV 610 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~N-DapaLk~AdVGIam 610 (923)
--..+.+.+.-. . .|+||+.+ |..+-++|++....
T Consensus 155 ~~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 155 IFGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEE
Confidence 223334444322 2 89999999 99999999987554
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.48 E-value=0.25 Score=51.13 Aligned_cols=40 Identities=23% Similarity=0.182 Sum_probs=34.5
Q ss_pred CCccHHHHHHHHHhCCCEEEEEc---cCChHHHHHHHHHhCCC
Q 002430 494 PRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 533 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlT---GD~~~tA~~ia~~~Gi~ 533 (923)
+-+++.++++.+++.|+++..+| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 56889999999999999999999 88887777777777774
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=94.36 E-value=0.12 Score=54.12 Aligned_cols=42 Identities=14% Similarity=0.000 Sum_probs=35.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEc---cCChHHHHHHHHHhCCC
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 533 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlT---GD~~~tA~~ia~~~Gi~ 533 (923)
+++-+++.++|++|++.|+++.++| |..........+++|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5567899999999999999999999 87777777777788874
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.00 E-value=0.0087 Score=59.00 Aligned_cols=103 Identities=12% Similarity=0.040 Sum_probs=61.1
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccC---------------ChHHHHHHHHHhCCCCCCCCCCcccCc-ccccccCcch
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQ-DKDASIAALP 555 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD---------------~~~tA~~ia~~~Gi~~~~~~~~~l~~~-~~~~~~~~~~ 555 (923)
-++.|++.++++.|++.|+++.++|+- ....+..+.+++|+.- . .++.+. ...+.
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~v~~s~~~~~~~----- 111 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF---D-EVLICPHLPADE----- 111 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE---E-EEEEECCCGGGC-----
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe---e-EEEEcCCCCccc-----
Confidence 357899999999999999999999997 4566777888888741 1 111100 00000
Q ss_pred HHHHhhhcCeEEecChhhH--HHHHHHHhhCCCEEEEEcCCccChHhhhcCCee-eEeccc
Q 002430 556 VDELIEKADGFAGVFPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA 613 (923)
Q Consensus 556 ~~~~~~~~~vfar~sP~~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG-Iamg~g 613 (923)
.....|.-. ..+.+.+.-....+.|+||..+|..+-++|++- |.+..+
T Consensus 112 ----------~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 112 ----------CDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp ----------CSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred ----------ccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 000011100 011122222223478999999999999999885 444433
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=93.59 E-value=0.068 Score=56.14 Aligned_cols=42 Identities=14% Similarity=0.173 Sum_probs=33.4
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCCh---HHHHHHHHHhCCC
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQL---AIGKETGRRLGMG 533 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~---~tA~~ia~~~Gi~ 533 (923)
.++-|++.++|+.|++.|+++.++||-.. ......-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 35679999999999999999999999873 3344444677875
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=93.24 E-value=0.013 Score=59.93 Aligned_cols=42 Identities=14% Similarity=0.096 Sum_probs=30.7
Q ss_pred CCEEEEEcCC-ccChHhhhcCCeeeEe---ccch-HHHh---hccCEEec
Q 002430 585 KHICGMTGDG-VNDAPALKKADIGIAV---ADAT-DAAR---SASDIVLT 626 (923)
Q Consensus 585 g~~V~m~GDG-~NDapaLk~AdVGIam---g~gt-d~A~---~aADivl~ 626 (923)
...|.|+||+ .||..|++.|++++++ |.+. +..+ ..+|+++.
T Consensus 193 ~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 193 SEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp GGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred cceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 3568999999 7999999999999654 3332 2222 36899884
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=93.00 E-value=0.024 Score=59.18 Aligned_cols=50 Identities=20% Similarity=0.202 Sum_probs=41.9
Q ss_pred hHHHHHHHHhhCCCEEEEEcC----CccChHhhhcCC-eeeEeccchHHHhhccC
Q 002430 573 HKYEIVKRLQERKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASD 622 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GD----G~NDapaLk~Ad-VGIamg~gtd~A~~aAD 622 (923)
+|..-++.|.+...-|.++|| |.||.+||+.|. +|++|+++.|..+..++
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~ 241 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEK 241 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHH
Confidence 788888777766668999999 799999999995 89999998888775443
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=92.22 E-value=0.068 Score=56.14 Aligned_cols=114 Identities=13% Similarity=0.034 Sum_probs=69.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHh---CCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL---GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~---Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
-++.|++.++++.|+++|+++.++|.-+...+..+-+.+ |+... + ..++ +.+ +...
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~-f-d~i~-~~~------------------~~~K 187 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL-V-DGHF-DTK------------------IGHK 187 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG-C-SEEE-CGG------------------GCCT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh-c-cEEE-ecC------------------CCCC
Confidence 368899999999999999999999998887777665543 34321 0 0011 100 0011
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee-eEec-cch---HHHhhccCEEec
Q 002430 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVA-DAT---DAARSASDIVLT 626 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG-Iamg-~gt---d~A~~aADivl~ 626 (923)
-.|+-=..+.+.+.-...-|.|+||..+|+.+-++|++- |.+. .+. +.....+|.++.
T Consensus 188 P~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~ 250 (261)
T 1yns_A 188 VESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 250 (261)
T ss_dssp TCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred CCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEEC
Confidence 112222334444443445689999999999999999974 3443 221 112235677763
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=92.14 E-value=0.1 Score=56.82 Aligned_cols=119 Identities=14% Similarity=0.130 Sum_probs=71.0
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCccccccc---Cc-ch-HHHHhh----
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASI---AA-LP-VDELIE---- 561 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~---~~-~~-~~~~~~---- 561 (923)
...+.|+..+.++.++++|++|+++||-.....+.+|..++..-++ +.+.+.|....... .. .. ..+...
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygI-p~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~ 219 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNA-KPENVIGVTTLLKNRKTGELTTARKQIAEGKYD 219 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCC-CGGGEEEECEEEECTTTCCEECHHHHHHTTCCC
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCC-CHHHeEeeeeeeecccccccccccccccccccc
Confidence 3456899999999999999999999999999999999986332221 22233332111000 00 00 000000
Q ss_pred -----hcCeEEe-----cChhhHHHHHHHHhhC-CCEEEEEcCCc-cChHhhhc--CCeeeEe
Q 002430 562 -----KADGFAG-----VFPEHKYEIVKRLQER-KHICGMTGDGV-NDAPALKK--ADIGIAV 610 (923)
Q Consensus 562 -----~~~vfar-----~sP~~K~~iV~~lq~~-g~~V~m~GDG~-NDapaLk~--AdVGIam 610 (923)
+...-.+ +--+-|..-|+..-+. ...+++.||+. .|.+||.. ++.|+++
T Consensus 220 ~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 220 PKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp GGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred ccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 0001111 1135677777765433 45789999994 79999965 5555554
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=90.93 E-value=0.22 Score=51.28 Aligned_cols=109 Identities=8% Similarity=0.024 Sum_probs=67.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.++|.... +..+-+.+|+.... . .+.+.+... ...-.|+
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~f--d-~i~~~~~~~----------------~~KP~p~ 153 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFF--T-FCADASQLK----------------NSKPDPE 153 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGC--S-EECCGGGCS----------------SCTTSTH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccc--c-ccccccccc----------------CCCCcHH
Confidence 4679999999999999999999997654 45566778875321 1 111111100 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEeccchHHHhhccCEEec
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLT 626 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~gtd~A~~aADivl~ 626 (923)
-=....+.+.-...-|.|+||..+|+.|-++|++ .|++..|. ..+|.++.
T Consensus 154 ~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~~ 204 (243)
T 4g9b_A 154 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL----TGAQLLLP 204 (243)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC----CSCSEEES
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhcC
Confidence 2223344444344568999999999999999987 34555442 35677663
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=90.31 E-value=0.11 Score=52.81 Aligned_cols=90 Identities=18% Similarity=0.180 Sum_probs=55.3
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHH----HHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE--
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKE----TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA-- 567 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~----ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa-- 567 (923)
+.+++.+.++.|++.|+++.++|+-....+.. +....+... .+... ..+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~----------------~~~~~~ 144 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNP----------------VIFAGD 144 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCC----------------CEECCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccch----------------hhhcCC
Confidence 56799999999999999999999986432222 222222210 00000 0011
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee-eEec
Q 002430 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVA 611 (923)
Q Consensus 568 r~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG-Iamg 611 (923)
.-.|+-..+ .+++.|. +.|+||..+|..+-++|++- |.+.
T Consensus 145 KP~p~~~~~---~~~~~g~-~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 145 KPGQNTKSQ---WLQDKNI-RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp CTTCCCSHH---HHHHTTE-EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHHH---HHHHCCC-EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 112333333 3444454 99999999999999999875 4443
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=90.24 E-value=0.22 Score=51.94 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=33.1
Q ss_pred ccHHHHHHHHHhCCCEEEEEc---cCChHHHHHHHHHhCCC
Q 002430 496 HDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 533 (923)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~mlT---GD~~~tA~~ia~~~Gi~ 533 (923)
|++.++|++++++|++++++| |..........+++|+.
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 899999999999999999999 67777777777788874
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=87.21 E-value=3.9 Score=41.65 Aligned_cols=43 Identities=19% Similarity=0.175 Sum_probs=29.6
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEcc---CChHHHHHHHHHhCCC
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 533 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTG---D~~~tA~~ia~~~Gi~ 533 (923)
.+++-+++.++++.+++.|+++..+|| -........-+++|+.
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 455557899999999999999999994 4444444444456664
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=85.87 E-value=42 Score=41.90 Aligned_cols=33 Identities=12% Similarity=0.254 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHHhhccCchhHHHHHHHHHHHh
Q 002430 275 YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307 (923)
Q Consensus 275 ~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~ 307 (923)
+..++..+++.+-.+.|.++++++.++....++
T Consensus 297 ~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~ma~ 329 (995)
T 3ar4_A 297 FKIAVALAVAAIPEGLPAVITTCLALGTRRMAK 329 (995)
T ss_dssp HHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcchHHHHHHHHHHHHHHhcc
Confidence 444555666777788888888888887665443
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=85.70 E-value=0.064 Score=53.30 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=33.9
Q ss_pred CCCCccHHHHHHHHHhC-CCEEEEEccCChHHHHHHHHHhCC
Q 002430 492 DPPRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGM 532 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~a-GI~v~mlTGD~~~tA~~ia~~~Gi 532 (923)
-++.|++.++++.|++. |+++.++|+-....+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 35789999999999999 999999999877666666666654
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=85.05 E-value=1.9 Score=45.86 Aligned_cols=43 Identities=16% Similarity=0.128 Sum_probs=33.5
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEcc---CChHHHHHHHHHhCCC
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 533 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTG---D~~~tA~~ia~~~Gi~ 533 (923)
.+++-+++.+++++|++.|++++++|| .........-+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 456668999999999999999999994 5555555555667764
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=83.54 E-value=0.65 Score=53.25 Aligned_cols=99 Identities=6% Similarity=-0.026 Sum_probs=57.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccC---ChHHHHHHHHH-hCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGD---QLAIGKETGRR-LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD---~~~tA~~ia~~-~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
++.||+.++++.|++.|+++.++|+- .......+... .|+... + ..++.+.+.. ...
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~-f-d~i~~~~~~~-----------------~~K 160 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH-F-DFLIESCQVG-----------------MVK 160 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT-S-SEEEEHHHHT-----------------CCT
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhh-e-eEEEeccccC-----------------CCC
Confidence 57899999999999999999999985 11111111111 133211 0 1111110000 111
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
-.|+-=..+.+.+.-....+.|+||..||..+-++|++....
T Consensus 161 P~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 161 PEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEE
Confidence 123333344444444445688999999999999999887655
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 923 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 3e-29 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-28 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-28 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-04 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 3e-20 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 5e-19 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-13 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 3e-10 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 4e-10 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-07 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 1e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 4e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 8e-06 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 2e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 2e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 3e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 3e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.001 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 112 bits (280), Expect = 3e-29
Identities = 59/156 (37%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM-GTNMYPSSS 541
DPPR + +I+ + G+ V MITGD RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 542 LLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601
+ + E +A FA V P HK +IV+ LQ I MTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 602 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637
KKA+IGIA+ T A++AS++VL + S I++AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 116 bits (291), Expect = 1e-28
Identities = 30/346 (8%), Positives = 80/346 (23%), Gaps = 37/346 (10%)
Query: 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV---DRNLIEVFAKG---------VEKEH 362
+ + + + + + + + ++ I K +
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 363 VILLAARASRTENQD--AIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
I L + + + A + + + + L + + +
Sbjct: 86 SIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN 145
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
+ + A + + + + + A+ + + + + K+
Sbjct: 146 NIYAALEEFATTE----LHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIART 201
Query: 481 PWQLVGLLPLFDP--PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 538
++ G + P + + G + + TG LG+
Sbjct: 202 TFKT-GYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA 260
Query: 539 SSSLLGQD--------KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590
D A P A Y + K +
Sbjct: 261 DFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320
Query: 591 TGDGVNDAPALKKADI-GIAVA-------DATDAARSASDIVLTEP 628
GD + D + +K I A + +D V+
Sbjct: 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 117 bits (295), Expect = 2e-28
Identities = 52/327 (15%), Positives = 100/327 (30%), Gaps = 93/327 (28%)
Query: 22 IPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVME 79
EE S GLT D+ L +G N+L E+ +S + + L ++
Sbjct: 7 KSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 66
Query: 80 AAAIMAIAL---ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPK 136
AA ++ L G + + I+++L+ N+ + +E NA NA AL
Sbjct: 67 LAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA 126
Query: 137 TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196
T+ D P +L E GE L
Sbjct: 127 TE-------------------------QDKTPLQQKLDE-----------FGEQL----- 145
Query: 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSI 256
++ +++ G V + + I
Sbjct: 146 -------------SKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFK---------I 183
Query: 257 AVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316
AV L + IP +P V++ +A+G+ R++++ AI
Sbjct: 184 AVA-------------------------LAVAAIPEGLPAVITTCLALGTRRMAKKNAIV 218
Query: 317 KRMTAIEEMAGMDVLCSDKTGTLTLNK 343
+ + ++E + + ++
Sbjct: 219 RSLPSVETLGRAIYNNMKQFIRYLISS 245
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 42.4 bits (99), Expect = 2e-04
Identities = 46/258 (17%), Positives = 78/258 (30%), Gaps = 40/258 (15%)
Query: 631 SVIISAVLTSRAIFQRMKNYTIYAVSITI-RIVLGFMLIALIWKFDFSPFMVLIIAILND 689
+ S RAI+ MK + Y +S + +V F+ AL P +L + ++ D
Sbjct: 219 RSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTD 278
Query: 690 GT-------------IMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFF--- 733
G IM R P W A G +G+ +F
Sbjct: 279 GLPATALGFNPPDLDIMDR-PPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYA 337
Query: 734 ------------WLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRS 781
M+ T+ G+ E M + I + S +
Sbjct: 338 EDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSEN 397
Query: 782 WSFIER-----PGLLLATAFVIA-QLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVT 835
S + LL + ++ + ++ +++ ++ SL
Sbjct: 398 QSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLP--MIFKLKALDLTQWLMVLKISLP- 454
Query: 836 YFPLD-ILKFGIRYILSG 852
LD ILKF R L G
Sbjct: 455 VIGLDEILKFIARNYLEG 472
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 85.5 bits (211), Expect = 3e-20
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 31/155 (20%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
D + + ++ +G+ V MITGD + R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
P K E VK+LQ K + GDG+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQ-AKEVVAFVGDGINDAPALA 99
Query: 603 KADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637
+AD+GIAV +D A + DIVL L +++A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 81.3 bits (200), Expect = 5e-19
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 17/112 (15%)
Query: 138 KVLRDGRWSEQ--DASILVPGDVISIKLGDIVPADARLLEGDP--LKIDQSALTGESLPV 193
KV R R S Q A +VPGD++ + +GD VPAD R+L L++DQS LTGES+ V
Sbjct: 4 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 63
Query: 194 TKNP-------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232
K+ + +FSG+ G+ +V TGV T GK +
Sbjct: 64 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 67.6 bits (164), Expect = 3e-13
Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 27/148 (18%)
Query: 377 DAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKR--TALTYIDSDGNWHRASKGA 430
DA ++A++ + ++ R +V + FN +K + D+ + KGA
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 431 PEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT------ 474
PE+IL C+ ++++ + G R LG + +P
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 475 -----KESPGAPWQLVGLLPLFDPPRHD 497
P VGL+ + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 59.1 bits (142), Expect = 3e-10
Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 25/190 (13%)
Query: 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVI 364
G + + + + + E+A + LC+D + K G E +
Sbjct: 33 GEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETK-------GVYEKVGEATETAL 85
Query: 365 L-LAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNW 423
L + + + + + A R +++ L F+ K ++ + +
Sbjct: 86 TTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSR 145
Query: 424 HR-----ASKGAPEQILALCNCR----------EDVRKKVHAVIDKF--AERGLRSLGVA 466
KGAPE ++ CN V++K+ +VI ++ LR L +A
Sbjct: 146 AAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALA 205
Query: 467 RQEIPEKTKE 476
++ P K +E
Sbjct: 206 TRDTPPKREE 215
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 58.8 bits (141), Expect = 4e-10
Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 6/157 (3%)
Query: 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIA 552
R E + + +I+G + +Y + + D
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDY----- 129
Query: 553 ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612
+ +D + K ++ L E M GD V D A K +D+ A
Sbjct: 130 -IHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 188
Query: 613 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 649
+ R + L I + + + + ++N
Sbjct: 189 LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (121), Expect = 1e-07
Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 13/151 (8%)
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
+ E + R V V +I+G +I + +L + ++
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN 129
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHI--CGMTGDGVNDA 598
L E + K +++K L+E+ H M GDG D
Sbjct: 130 RLKFYFNG---------EYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180
Query: 599 PALKKADIGIAVA--DATDAARSASDIVLTE 627
A AD I + + +T+
Sbjct: 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 50.1 bits (119), Expect = 1e-07
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629
++++K+ GD D PA AVADA ++A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 48.1 bits (113), Expect = 1e-06
Identities = 15/68 (22%), Positives = 23/68 (33%)
Query: 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629
+ + L + GDG ND A K +AVA A + +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 630 LSVIISAV 637
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.4 bits (109), Expect = 4e-06
Identities = 11/58 (18%), Positives = 17/58 (29%)
Query: 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
+ K + V + + GD ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 45.7 bits (107), Expect = 8e-06
Identities = 33/193 (17%), Positives = 56/193 (29%), Gaps = 55/193 (28%)
Query: 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL 559
E+IR A G+ V +++G+ + + LG+ ++ + + D D SI +E
Sbjct: 27 ESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEG 86
Query: 560 IEK---------------------ADGFAGVFPEHKYEIVKRLQERKHI----------- 587
K A + PE + K + R +
Sbjct: 87 TNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLM 146
Query: 588 -----------------------CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ GD ND P + A+ATD ++ SD V
Sbjct: 147 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFV 206
Query: 625 LTEPGLSVIISAV 637
I
Sbjct: 207 SDYSYGEEIGQIF 219
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 45.2 bits (105), Expect = 1e-05
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 625
E +I K GDG ND KKA + IA A + +DI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 626 TEPGLSVIISAV 637
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 45.0 bits (105), Expect = 2e-05
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629
++K + GD ND L AVA+ATD+A+S + VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSH 267
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 42.3 bits (98), Expect = 2e-04
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ L + GD ND ++ A +G+AV +A + + ++ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 41.8 bits (97), Expect = 2e-04
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 573 HKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
K + + + I GDG ND L+ A IG+A+ A + ++A+D V
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.5 bits (96), Expect = 3e-04
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 592 GDGVNDAPALKKADIGIAVADATDAARSASDIV 624
GD +ND L+ A G+A+ +A + +S +D V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 41.5 bits (96), Expect = 3e-04
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 592 GDGVNDAPALKKADIGIAVADATDAARSASDIVLT---EPGLSVIISAVLTSRAIF 644
GD NDA LK A A+ +A + + + G +I AVL + F
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPF 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 39.6 bits (91), Expect = 0.001
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ + +R+ +K + GD ND ++A + +A+ +A + + ASDIV
Sbjct: 193 KALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIV 245
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 923 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.94 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.92 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.82 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.56 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.12 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.06 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.0 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.98 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.95 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.76 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.7 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.69 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.68 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.66 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.52 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.48 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.42 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.24 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.16 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.05 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 97.99 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.53 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.53 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.32 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.32 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.23 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.13 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.57 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 96.32 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.13 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.09 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.88 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.72 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.44 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.4 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 94.95 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 94.84 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.29 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.24 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.16 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.14 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 92.56 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 91.35 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 90.55 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 90.09 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 90.08 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 89.56 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 88.36 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 88.09 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 86.45 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 84.03 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 82.79 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 81.5 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=5.6e-39 Score=371.10 Aligned_cols=231 Identities=21% Similarity=0.242 Sum_probs=182.7
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHhcC---C
Q 002430 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG---G 92 (923)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~---~ 92 (923)
|||+.+.||+++.|+++ ++|||++||++|+++||+|++++++ .++|+.|+++|++|+.++|+++++++++++.. .
T Consensus 3 ~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 82 (472)
T d1wpga4 3 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 82 (472)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred ChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhccc
Confidence 68999999999999999 6799999999999999999998866 78899999999999999999999999998742 2
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceE
Q 002430 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (923)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ 172 (923)
....+|.++++|++++++|+.++++||+|+++++++++++.++. ..||++|+|.+
T Consensus 83 ~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~d~~ 137 (472)
T d1wpga4 83 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPLQQK 137 (472)
T ss_dssp STTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHHHHH
T ss_pred ccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------ccccCchHHHH
Confidence 23458999999999999999999999999999999999877664 35788999987
Q ss_pred EEecCCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccCCCCcHHHHHHHHHHHH
Q 002430 173 LLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFC 252 (923)
Q Consensus 173 ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~~~~~~~~~~~~i~~~~ 252 (923)
+.+ +||+.+. +.++|..+|..|.+|++...+....
T Consensus 138 l~~-----------~g~~i~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 172 (472)
T d1wpga4 138 LDE-----------FGEQLSK------------------VISLICVAVWLINIGHFNDPVHGGS---------------- 172 (472)
T ss_dssp HHH-----------HHHHHHH------------------HHHHHHHHHHHHCCTTSSSCCSSSC----------------
T ss_pred HHH-----------HHHHHHH------------------HHHHHHHHHHHHHHHHHHHHHhhhh----------------
Confidence 643 2222210 0011112222222222221111110
Q ss_pred HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEE
Q 002430 253 ICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 332 (923)
Q Consensus 253 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~ 332 (923)
....+.+.+..+++++++++|+|||+++++++++|++||+|+|++||+++++|++|+..+.|
T Consensus 173 ------------------~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~ 234 (472)
T d1wpga4 173 ------------------WIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNN 234 (472)
T ss_dssp ------------------SSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHH
T ss_pred ------------------hHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHH
Confidence 11344566778889999999999999999999999999999999999999999999998888
Q ss_pred ecCC
Q 002430 333 SDKT 336 (923)
Q Consensus 333 ~DKT 336 (923)
+|||
T Consensus 235 ~~k~ 238 (472)
T d1wpga4 235 MKQF 238 (472)
T ss_dssp HHHH
T ss_pred hHHh
Confidence 8887
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=2.1e-35 Score=290.96 Aligned_cols=148 Identities=39% Similarity=0.555 Sum_probs=134.1
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCC--CCcccCcccccccCcchHHHHhhhcCeEEec
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 569 (923)
||||+|++++|+.||++||+|||+|||+..||+++|+++||..+... ...+.+.+. ..++..++.+..++..+|||+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREF-DDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHH-HHSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCcccccccccccccc-chhhHHHHhhhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999754321 112333333 356677888899999999999
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHh
Q 002430 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (923)
Q Consensus 570 sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~g 640 (923)
+|+||..+|+.||++|++|+|+|||+||+|||++|||||+|++|+++|+++||++|++++|+.++.+|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=1.1e-30 Score=246.78 Aligned_cols=125 Identities=34% Similarity=0.495 Sum_probs=109.6
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhh
Q 002430 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (923)
Q Consensus 483 ~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 562 (923)
+..+.++++|++|+|++++|+.|+++||+++|+|||+..+|.++|++|||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 345678999999999999999999999999999999999999999999983
Q ss_pred cCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 563 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 563 ~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.+|++++|++|..+|+.+|+. ++|+|+|||.||+|||++|||||+|++++++++++||++|++++|+.|+.+|+
T Consensus 62 -~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred -hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 269999999999999999875 58999999999999999999999999999999999999999999999999873
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.94 E-value=1.1e-30 Score=292.97 Aligned_cols=313 Identities=10% Similarity=-0.025 Sum_probs=212.7
Q ss_pred cCchhhhccCceEEEecCCCccccCcceeeeeeee-----ecccCCChH-HHHHHHHHH----ccccCcchHHHHHHHhc
Q 002430 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE-----VFAKGVEKE-HVILLAARA----SRTENQDAIDAAIVGML 387 (923)
Q Consensus 318 ~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~-----~~~~~~~~~-~~l~~a~~~----~~~~~~~~~~~ai~~~~ 387 (923)
-+.+.|.||..+++|+|||||+|.|+|++..+... ....++..+ +++...+.+ .....+++...+++...
T Consensus 29 ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (380)
T d1qyia_ 29 LLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQD 108 (380)
T ss_dssp HHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCS
T ss_pred HhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 34567999999999999999999999988553211 001122222 222211111 11123355566665544
Q ss_pred CCh----hhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEE
Q 002430 388 ADP----KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSL 463 (923)
Q Consensus 388 ~~~----~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l 463 (923)
... .+.+..+.....+||++.+|+|++.....++.+..+.||+++.+. ..+.....+...+.+++.+|+|++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~~~~~~~~~~~a~~~~r~l 184 (380)
T d1qyia_ 109 EPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----VSDATLFSLKGALWTLAQEVYQEW 184 (380)
T ss_dssp SCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----CSCCGGGSTTCHHHHHHHHHHHHH
T ss_pred hhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----CcHHHHHHHHhHHHHHHHHHHHHH
Confidence 322 223456677778999999999987654434444455667766542 223334456677889999999999
Q ss_pred EEEeeecCCCCCCCCCCCceEEEEeccCCCCCc--cHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCc
Q 002430 464 GVARQEIPEKTKESPGAPWQLVGLLPLFDPPRH--DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSS 541 (923)
Q Consensus 464 ~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~--~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~ 541 (923)
++|++..+..+.+ ....+...|++..+|++|| |++++++.||++||+++|+|||+..+|..+++++||.........
T Consensus 185 ~~~~~~~~~~~~~-~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i 263 (380)
T d1qyia_ 185 YLGSKLYEDVEKK-IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFI 263 (380)
T ss_dssp HHHHHHHHHHHCS-CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGE
T ss_pred HHhhhcccccccc-cchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceE
Confidence 9998865432211 1223455799999999555 999999999999999999999999999999999999643211112
Q ss_pred ccCcccc--------cccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCC---eeeEe
Q 002430 542 LLGQDKD--------ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAV 610 (923)
Q Consensus 542 l~~~~~~--------~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~Ad---VGIam 610 (923)
+.+.+.. ......+-.+.+..+..++|++|+||..+|+.++..++.|+|||||+||+||+|+|| |||+|
T Consensus 264 ~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~ 343 (380)
T d1qyia_ 264 ATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLT 343 (380)
T ss_dssp ECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred EecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEec
Confidence 2221100 000011111233344568999999999999999999999999999999999999999 99999
Q ss_pred c-cchHHHhh----ccCEEecCCCchhHHHHH
Q 002430 611 A-DATDAARS----ASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 611 g-~gtd~A~~----aADivl~~~~~~~i~~~i 637 (923)
| .|++++++ .||+++ +++..+...+
T Consensus 344 G~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 344 GLKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp BTTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 8 77766554 899999 6677776554
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.92 E-value=1.4e-25 Score=204.35 Aligned_cols=97 Identities=40% Similarity=0.606 Sum_probs=89.0
Q ss_pred cEEEEeCCeE--EEEeCCCCCCCcEEEEeCCCeeccceEEEe--cCCeEEEeccccCCCcceecCCC-------------
Q 002430 136 KTKVLRDGRW--SEQDASILVPGDVISIKLGDIVPADARLLE--GDPLKIDQSALTGESLPVTKNPY------------- 198 (923)
Q Consensus 136 ~~~V~Rdg~~--~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~--g~~~~Vdes~LTGEs~pv~K~~~------------- 198 (923)
.++|+|+|++ ++|+++||||||||.|++||+|||||+|++ +.++.||||+|||||.|+.|.++
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5899999985 789999999999999999999999999986 44589999999999999999753
Q ss_pred CcccccceeecCeEEEEEEEecchhhHHhHHhhh
Q 002430 199 DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232 (923)
Q Consensus 199 ~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~ 232 (923)
+.+|+||.|.+|++.++|++||.+|.+|||++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 5699999999999999999999999999998764
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.82 E-value=6e-20 Score=188.17 Aligned_cols=122 Identities=22% Similarity=0.350 Sum_probs=100.3
Q ss_pred cchHHHHHHHhc----CChhhhhcCceeEEeecCCCCCcceEEEEEec--CCcEEEEEcCcHHHHHHhccC---------
Q 002430 376 QDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDS--DGNWHRASKGAPEQILALCNC--------- 440 (923)
Q Consensus 376 ~~~~~~ai~~~~----~~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~--~g~~~~~~KGa~e~il~~~~~--------- 440 (923)
+||+|.|++.++ .+....+..++++..+||+|.+|+|+++++.+ ++++++|+|||||.|+++|+.
T Consensus 65 GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~ 144 (214)
T d1q3ia_ 65 GDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIP 144 (214)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEE
T ss_pred cChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceee
Confidence 599999998765 46667788999999999999999999999864 456889999999999999973
Q ss_pred -ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCC-----------CCCCCCCceEEEEeccCCCCCcc
Q 002430 441 -REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT-----------KESPGAPWQLVGLLPLFDPPRHD 497 (923)
Q Consensus 441 -~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~-----------~~~~e~~l~llG~i~i~D~lr~~ 497 (923)
+++.++.+.+.+++|+.+|+||||+||++++.++ .+..|++|+|+|+++|+||||++
T Consensus 145 l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 145 LDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred chHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 5677889999999999999999999999987543 23457899999999999999985
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.56 E-value=1.1e-15 Score=158.72 Aligned_cols=97 Identities=24% Similarity=0.379 Sum_probs=81.3
Q ss_pred hcCceeEEeecCCCCCcceEEEEEecCC-----cEEEEEcCcHHHHHHhccC----------ChhHHHHHHHHHHHH--H
Q 002430 394 RAGVREVHFLPFNPVDKRTALTYIDSDG-----NWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKF--A 456 (923)
Q Consensus 394 ~~~~~~l~~~~F~s~~k~~sv~~~~~~g-----~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~--a 456 (923)
+..++++..+||+|.||||+++++.+++ .+.+|+|||||.|+++|+. +++.++.+.+.++++ +
T Consensus 116 ~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 195 (239)
T d1wpga3 116 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG 195 (239)
T ss_dssp HHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTS
T ss_pred hhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHh
Confidence 4678899999999999999999987654 3689999999999999973 456678888888876 6
Q ss_pred HcCCeEEEEEeeecCCCCC----------CCCCCCceEEEEecc
Q 002430 457 ERGLRSLGVARQEIPEKTK----------ESPGAPWQLVGLLPL 490 (923)
Q Consensus 457 ~~GlR~l~~A~~~~~~~~~----------~~~e~~l~llG~i~i 490 (923)
++|+|||++|||+++..+. +.+|++|+|+|+++|
T Consensus 196 ~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 196 RDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp SCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred hCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 7999999999999875432 235789999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.12 E-value=8.5e-11 Score=119.52 Aligned_cols=147 Identities=20% Similarity=0.210 Sum_probs=104.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCC--Ccc-c-------------------------C
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS--SSL-L-------------------------G 544 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~--~~l-~-------------------------~ 544 (923)
.+.+.+.++|++|+++|++++++||.....+...++.+++....... ..+ . +
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 46788999999999999999999999999999999999885421100 000 0 0
Q ss_pred cc----cc----------cccCcchHHHHhhhcC---------eEEe--cChhhHHHHHHHHhhC----CCEEEEEcCCc
Q 002430 545 QD----KD----------ASIAALPVDELIEKAD---------GFAG--VFPEHKYEIVKRLQER----KHICGMTGDGV 595 (923)
Q Consensus 545 ~~----~~----------~~~~~~~~~~~~~~~~---------vfar--~sP~~K~~iV~~lq~~----g~~V~m~GDG~ 595 (923)
.. .. .....+.+.+++.+.. .+.. .....|...++.+.++ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 00 00 0001112333333221 1122 2345788888776553 35689999999
Q ss_pred cChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHH
Q 002430 596 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 596 NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~ 639 (923)
||.||++.|++||||+++++.++++||+|+..++...++.++++
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~ 222 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYH 222 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999999999999998888888888765
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.06 E-value=4.4e-10 Score=114.44 Aligned_cols=149 Identities=20% Similarity=0.152 Sum_probs=104.5
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCC--CcccCc--cccc-----------------
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS--SSLLGQ--DKDA----------------- 549 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~--~~l~~~--~~~~----------------- 549 (923)
+.++.+++.+++++|++.|++++++||.+...+..++..+|+....... ..+... ....
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 3456789999999999999999999999999999999999985432110 000000 0000
Q ss_pred ------------------ccCcchHHHHhh---h--cCe-----EEecCh--hhHHHHHHHHhhC----CCEEEEEcCCc
Q 002430 550 ------------------SIAALPVDELIE---K--ADG-----FAGVFP--EHKYEIVKRLQER----KHICGMTGDGV 595 (923)
Q Consensus 550 ------------------~~~~~~~~~~~~---~--~~v-----far~sP--~~K~~iV~~lq~~----g~~V~m~GDG~ 595 (923)
....+..+.+.. . ..+ +....| .+|...++.+.+. ..-|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 011111222211 1 111 223334 4898888877553 23488899999
Q ss_pred cChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHH
Q 002430 596 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 596 NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~ 639 (923)
||.+|++.|++||||+++.+.+++.||+|...++...|..++++
T Consensus 178 nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999998888888754
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.00 E-value=4.5e-10 Score=109.72 Aligned_cols=98 Identities=24% Similarity=0.255 Sum_probs=81.6
Q ss_pred HHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHH
Q 002430 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (923)
Q Consensus 500 ~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~ 579 (923)
.+|+.|+..|+.+.++||++...+...++++++.. ++. ...+|...++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------~~~--~~~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFL--GKLEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEE--SCSCHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------------ccc--ccccHHHHHH
Confidence 47999999999999999999999999999998742 122 2345555555
Q ss_pred HHhh-C---CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCC
Q 002430 580 RLQE-R---KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (923)
Q Consensus 580 ~lq~-~---g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~ 629 (923)
.+.+ . ...|+++|||.||.|||+.|++|+||+++.+.+++.||+|+..++
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~G 140 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCT
T ss_pred HHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCC
Confidence 4443 2 367999999999999999999999999999999999999998775
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=2.2e-10 Score=116.34 Aligned_cols=126 Identities=19% Similarity=0.158 Sum_probs=89.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
+++|++.+.|+.||+.|++++++||.....+..+++.+|+.....-...+... .+....+.. ....-..+.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~-~~G~~~g~~--------~~~p~~~~~ 152 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFY-FNGEYAGFD--------ETQPTAESG 152 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEEC-TTSCEEEEC--------TTSGGGSTT
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeee-ehhccccce--------eeeeeeccc
Confidence 36899999999999999999999999999999999999996321000000000 000000000 000013467
Q ss_pred hHHHHHHHHhhC--CCEEEEEcCCccChHhhhcCCeeeEec--cchHHHhhccCEEecC
Q 002430 573 HKYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA--DATDAARSASDIVLTE 627 (923)
Q Consensus 573 ~K~~iV~~lq~~--g~~V~m~GDG~NDapaLk~AdVGIamg--~gtd~A~~aADivl~~ 627 (923)
.|.++++.++++ -..|.|+|||.||.+|++.|+++||++ ......++.||+++.+
T Consensus 153 ~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 153 GKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred hHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence 899999999864 245899999999999999999999996 3445666789999853
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.95 E-value=2.2e-10 Score=116.61 Aligned_cols=149 Identities=13% Similarity=0.056 Sum_probs=107.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+....+........+.. ....-......+++..|+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~------~~~~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYI------HIDWPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBC------EEECTTCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcc------eeccccccccccccCCHH
Confidence 46899999999999999999999999999999999999875432211111100000 000000011235677899
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHH-hhccCEEecCCCchhHHHHHHHhHHHHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAA-RSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A-~~aADivl~~~~~~~i~~~i~~gR~~~~~i~ 648 (923)
.|..+++.++..++.|.|+||+.||.+|+++||+++|++...+.+ ++..+++- -++|+.|...+++-..+.+.++
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~~~~ 224 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQEWLQ 224 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHHHHT
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999998554444 44455443 4689999988877666555443
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.76 E-value=1.1e-08 Score=106.57 Aligned_cols=71 Identities=21% Similarity=0.221 Sum_probs=59.1
Q ss_pred ecChh--hHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 568 GVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 568 r~sP~--~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
..+|. +|...|+.+.+. ..-++++|||.||.+||+.|+.|+||+++.+..+..||++...++=..+..+++
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 35565 699999988764 234889999999999999999999999999999999999988766566776664
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.70 E-value=3e-08 Score=98.18 Aligned_cols=129 Identities=17% Similarity=0.173 Sum_probs=94.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
+..++....++.+ +.+.++..+|+.............++..... ..+..... ..........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~-------------~~~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLC--HKLEIDDS-------------DRVVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEE--EEEEECTT-------------SCEEEEECCSSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhc--ceeeeecc-------------cccccccccchh
Confidence 4556777777665 5789999999999999999999888753210 00000000 001123445667
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.+...++.++....-|.++|||.||.|||+.|++||||+...++.++++|++.. .++..++.++.
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~ 197 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHH
Confidence 777888888888899999999999999999999999997777888889999875 56778887664
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.69 E-value=1.4e-08 Score=106.49 Aligned_cols=71 Identities=23% Similarity=0.298 Sum_probs=60.1
Q ss_pred ecChh--hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 568 GVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 568 r~sP~--~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.++|. .|..-++.+.+. | ..|+++|||.||.+||+.|+.||||++|++.+++.||++...++-..+..+++
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 34554 799988888764 2 35899999999999999999999999999999999999998777777777764
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.68 E-value=6.9e-09 Score=108.17 Aligned_cols=72 Identities=21% Similarity=0.250 Sum_probs=60.8
Q ss_pred EecChh--hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 567 AGVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 567 ar~sP~--~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
-.++|. .|..-++.|.++ | .-|.++|||.||.|||+.|+.|+||++|.+..|+.||+|+..++-..+..+++
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 456665 599999888764 3 34889999999999999999999999999999999999998777777777764
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.66 E-value=1.6e-08 Score=100.41 Aligned_cols=130 Identities=24% Similarity=0.277 Sum_probs=91.2
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe--c
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--V 569 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar--~ 569 (923)
.++.+++.+.++.++..|..+.++||.....+....++.++..... ..+...... ....... .
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------------~~~~~~~~~~ 138 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA--NRLIVKDGK-------------LTGDVEGEVL 138 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE--EEEEEETTE-------------EEEEEECSSC
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhh--hhhcccccc-------------cccccccccc
Confidence 4678899999999999999999999999999999999888743110 000000000 0000000 0
Q ss_pred ChhhHH----HHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHH
Q 002430 570 FPEHKY----EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 570 sP~~K~----~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
.+..|. .+.+.++-..+-|.++|||.||.||++.|++|||| ++.+..++.||+|+-.+++..++.+|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp STTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred ccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 112233 33333333345688999999999999999999999 77888899999999888888887654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.52 E-value=3.9e-08 Score=101.96 Aligned_cols=73 Identities=26% Similarity=0.284 Sum_probs=60.5
Q ss_pred EecChh--hHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHH
Q 002430 567 AGVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 567 ar~sP~--~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~ 639 (923)
..+.|. .|..-++.|.++ ...++++|||.||.+||+.|+.||||++|++.+|+.||+|...++=..+..++++
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 344554 698888888653 3458889999999999999999999999999999999999877777788888754
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.48 E-value=6.7e-08 Score=100.87 Aligned_cols=65 Identities=28% Similarity=0.321 Sum_probs=51.7
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCch-hHHHHH
Q 002430 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS-VIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~-~i~~~i 637 (923)
.|..-++.+.+. ...|+++|||.||.+||+.|+.|+||++|.+.+|+.||+|+..++-. .+..++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l 276 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLL 276 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHH
Confidence 576666666543 34699999999999999999999999999999999999999755433 344444
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.42 E-value=1.3e-07 Score=98.27 Aligned_cols=71 Identities=25% Similarity=0.304 Sum_probs=60.0
Q ss_pred ecChh--hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 568 GVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 568 r~sP~--~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.++|. .|...|+.+.+. | .-|+++|||.||.|||+.|++||||++|++.+|+.||+++..++-..+..+|+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 45664 699888887653 2 34788999999999999999999999999999999999998888778877764
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.24 E-value=1.4e-06 Score=88.17 Aligned_cols=44 Identities=11% Similarity=0.071 Sum_probs=39.4
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~ 534 (923)
.+.-.+.+.++|++|+++|+++++.||.+...+..+.+++|+..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 44556789999999999999999999999999999999999854
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.16 E-value=1.9e-06 Score=87.78 Aligned_cols=69 Identities=19% Similarity=0.166 Sum_probs=55.1
Q ss_pred hhhHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccC-------EEecCCCchhHHHHHHH
Q 002430 571 PEHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVLT 639 (923)
Q Consensus 571 P~~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aAD-------ivl~~~~~~~i~~~i~~ 639 (923)
..+|...++.+.+. | ..|.++|||.||.|||+.|+.|++|+++.+..++.|| ++-..++-..+.+++++
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 45799999988765 2 3478899999999999999999999999998898888 45444556667777654
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.05 E-value=5e-06 Score=76.78 Aligned_cols=122 Identities=20% Similarity=0.283 Sum_probs=88.6
Q ss_pred ccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhh---hhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcH
Q 002430 355 AKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKE---ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAP 431 (923)
Q Consensus 355 ~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~---~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~ 431 (923)
..|++.++++.+|+.++..++ ||+..||+.++.+... ...........||....+...+. .+| ..+.+|++
T Consensus 10 ~~G~~~~ell~~AA~aE~~Se-HPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~g--~~v~~G~~ 83 (136)
T d2a29a1 10 AQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN---IDN--RMIRKGSV 83 (136)
T ss_dssp CTTCCHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE---ETT--EEEEEECH
T ss_pred CCCCCHHHHHHHHHHHhCCCC-chHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE---ECC--EEEEecHH
Confidence 468999999999999987666 9999999998742211 11223344556777666544432 256 46778999
Q ss_pred HHHHHhccC-ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCC
Q 002430 432 EQILALCNC-REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 495 (923)
Q Consensus 432 e~il~~~~~-~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr 495 (923)
..+.+.+.. .......+.+.+++++.+|..++.+|... +++|++++.|++|
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 84 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 887665432 12345677788899999999999999865 8999999999986
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=97.99 E-value=2.1e-05 Score=78.33 Aligned_cols=41 Identities=17% Similarity=0.071 Sum_probs=38.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 533 (923)
.+.+.+.++|++|+++|+.++..||.+...+..+.+++|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 36688999999999999999999999999999999999985
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.53 E-value=0.0001 Score=73.51 Aligned_cols=125 Identities=15% Similarity=0.192 Sum_probs=81.6
Q ss_pred CCCccHHHHHHHHHhCC-CEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aG-I~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
++-||+.++++.|++.| +++.++||.....+..+-++.|+..-. + ..+.+.+.. .. .-.|
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f-d-~i~~~~~~~---~~--------------k~~p 151 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDAL---DR--------------NELP 151 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTCS---SG--------------GGHH
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc-c-ccccccccc---cc--------------cchh
Confidence 34689999999999987 899999999999999999999986421 1 111111000 00 0012
Q ss_pred hhHHHHHHHHhhC---CCEEEEEcCCccChHhhhcCCe---eeEec--cchHHHhhccCEEecCCCchhHHHHHH
Q 002430 572 EHKYEIVKRLQER---KHICGMTGDGVNDAPALKKADI---GIAVA--DATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 572 ~~K~~iV~~lq~~---g~~V~m~GDG~NDapaLk~AdV---GIamg--~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
+--...++.+... .+.+.|+||+.+|..|-+.|++ ||+-| ...+..+..+|+++ ++++.+...+.
T Consensus 152 ~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 152 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 2222333344322 3568999999999999999994 44444 22334555689998 67777777663
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.53 E-value=0.00027 Score=73.23 Aligned_cols=134 Identities=13% Similarity=0.133 Sum_probs=81.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe--cC
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--VF 570 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar--~s 570 (923)
++|+|+++.++.|++.|+.+.++||--......+.+++|+..+.. .+. ....+ .++..+ ...|-. ..
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni--~I~-sN~l~--f~~~~~------~~~~~~~~i~ 203 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV--KVV-SNFMD--FDENGV------LKGFKGELIH 203 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTE--EEE-EECEE--ECTTSB------EEEECSSCCC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCc--eEE-eeEEE--EeCCee------EeeccCCccc
Confidence 589999999999999999999999999999999999999864310 000 00000 000000 000000 11
Q ss_pred hhhHHHHH----HHHh--hCCCEEEEEcCCccChHhhhc---CCeeeEec--c-c----hHHHhhccCEEecCCCchhHH
Q 002430 571 PEHKYEIV----KRLQ--ERKHICGMTGDGVNDAPALKK---ADIGIAVA--D-A----TDAARSASDIVLTEPGLSVII 634 (923)
Q Consensus 571 P~~K~~iV----~~lq--~~g~~V~m~GDG~NDapaLk~---AdVGIamg--~-g----td~A~~aADivl~~~~~~~i~ 634 (923)
...|...+ ..++ .....|.++|||+||.+|.+. ++.++++| . - -+.=.++-||||.+|.--.++
T Consensus 204 ~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~ 283 (291)
T d2bdua1 204 VFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVV 283 (291)
T ss_dssp TTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHH
T ss_pred cccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhHH
Confidence 22333222 1122 234568899999999999874 45555554 1 1 122347889999988766666
Q ss_pred HHH
Q 002430 635 SAV 637 (923)
Q Consensus 635 ~~i 637 (923)
..+
T Consensus 284 ~~i 286 (291)
T d2bdua1 284 NSI 286 (291)
T ss_dssp HHH
T ss_pred HHH
Confidence 555
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.32 E-value=5.5e-05 Score=74.90 Aligned_cols=124 Identities=17% Similarity=0.125 Sum_probs=85.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|+++++++.|++.|+++.++||.....+..+.+++||.... ...+...+.. ...-.|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLP-----------------EIKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSS-----------------SCTTSSH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhc--cccccccccc-----------------cccccch
Confidence 46799999999999999999999999999999999999985321 1111111000 1112244
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEecc----chHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~----gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
--..+.+.++-....++|+||..+|..+-++|++ .|.+.. ..+....-+|+++ ++++.++.+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred hhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence 4445555666566779999999999999999987 444432 2233455689998 5676665543
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.32 E-value=0.00026 Score=71.83 Aligned_cols=126 Identities=14% Similarity=0.130 Sum_probs=85.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++.|+++.++||.+...+..+-++.|+..-. ....+.+.+.. ...-.|+
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f-~d~~~~~d~~~-----------------~~KP~p~ 160 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDVP-----------------AGRPYPW 160 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGSS-----------------CCTTSSH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc-ccccccccccc-----------------ccccChH
Confidence 57899999999999999999999999999999999999985421 11112111100 1122344
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCccChHhhhcCCee-eEeccchH---------------------------HHhhccCE
Q 002430 573 HKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIG-IAVADATD---------------------------AARSASDI 623 (923)
Q Consensus 573 ~K~~iV~~lq~~-g~~V~m~GDG~NDapaLk~AdVG-Iamg~gtd---------------------------~A~~aADi 623 (923)
.=....+.+.-. .+.|+|+||..+|..+=+.|++- |++..|.. ..+.-||+
T Consensus 161 ~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~ 240 (257)
T d1swva_ 161 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 240 (257)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCE
Confidence 445555555532 45699999999999999999973 44433310 11223899
Q ss_pred EecCCCchhHHHHHH
Q 002430 624 VLTEPGLSVIISAVL 638 (923)
Q Consensus 624 vl~~~~~~~i~~~i~ 638 (923)
++ +++..+...|.
T Consensus 241 vi--~~l~eL~~ii~ 253 (257)
T d1swva_ 241 TI--ETMQELESVME 253 (257)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred EE--CCHHHHHHHHH
Confidence 99 67778877764
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.23 E-value=0.00016 Score=71.54 Aligned_cols=58 Identities=10% Similarity=0.220 Sum_probs=44.1
Q ss_pred EecChh--hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecC
Q 002430 567 AGVFPE--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627 (923)
Q Consensus 567 ar~sP~--~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~ 627 (923)
-.+.|. .|..-++.|.++.. +.++||+.||.+|++.|+-|+||+.|. ++.+|++.+.+
T Consensus 151 idi~p~g~~Kg~al~~l~~~~~-~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~~ 210 (229)
T d1u02a_ 151 IELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVAD 210 (229)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEESS
T ss_pred EEEecCCCCHHHHHHHHhcccc-ceeecCCCChHHHHhccCCeEEEEeCC--CCccCeEEcCC
Confidence 344553 79999999988765 567899999999999997777665332 25688999854
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.13 E-value=0.0002 Score=70.66 Aligned_cols=119 Identities=16% Similarity=0.185 Sum_probs=79.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..- + ...+.+.+. ..+.-.|+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~-F-~~i~~~~~~-----------------~~~Kp~~~ 148 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS-F-DALASAEKL-----------------PYSKPHPQ 148 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-C-SEEEECTTS-----------------SCCTTSTH
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccc-c-ccccccccc-----------------ccchhhHH
Confidence 3569999999999999999999999999999999999999532 1 111111110 01122233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeee-Eecc--c-hHHHhhccCEEecCCCchh
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVAD--A-TDAARSASDIVLTEPGLSV 632 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGI-amg~--g-td~A~~aADivl~~~~~~~ 632 (923)
-=..+++.+.-....++|+||..+|..|-+.|++.. ++.. . .+.-...||+++ ++|..
T Consensus 149 ~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~e 210 (218)
T d1te2a_ 149 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTE 210 (218)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGG
T ss_pred HHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEE--CChhh
Confidence 334555566555567999999999999999998743 3322 1 222234688887 44543
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.57 E-value=0.0006 Score=66.56 Aligned_cols=120 Identities=10% Similarity=0.061 Sum_probs=80.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.+++.+.++.++..| ++.++|+.....+..+.+++|+.... ..++ +.+. .....|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d~v~-~~~~------------------~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--DGIY-GSSP------------------EAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--SEEE-EECS------------------SCCSHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc--cccc-cccc------------------ccccccc
Confidence 46799999999998775 89999999999999999999985421 1111 1000 1122344
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEe--c--cchHHHhhccCEEecCCCchhHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV--A--DATDAARSASDIVLTEPGLSVIISA 636 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIam--g--~gtd~A~~aADivl~~~~~~~i~~~ 636 (923)
.-..+.+.++-...-+.|+||+.||..|-++|++ .|++ | ...+.....+|+++ +++..++..
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~ 208 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAY 208 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHH
T ss_pred ccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHH
Confidence 4344444444445568899999999999999997 5555 3 22344445589997 456666553
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.32 E-value=0.0006 Score=67.55 Aligned_cols=53 Identities=19% Similarity=0.301 Sum_probs=45.5
Q ss_pred hHHHHHHHHhhC-CCEEEEEcC----CccChHhhhcCC-eeeEeccchHHHhhccCEEe
Q 002430 573 HKYEIVKRLQER-KHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVL 625 (923)
Q Consensus 573 ~K~~iV~~lq~~-g~~V~m~GD----G~NDapaLk~Ad-VGIamg~gtd~A~~aADivl 625 (923)
.|..-++.|.+. ..-|.++|| |.||.+||+.|. .|+||+++.|..+..+|++|
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 677778877654 557899999 569999999997 79999999999999999876
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.13 E-value=0.011 Score=56.38 Aligned_cols=134 Identities=17% Similarity=0.137 Sum_probs=75.4
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHH---------------HHHHHHHhCCCCCCCCCCcccCcccccccCcchHHH
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAI---------------GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDE 558 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~t---------------A~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~ 558 (923)
+-|++.++++.|+++|+++.++|.-.... ........|+.... ........+ .....
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~cp~~p~-----~~~~~ 99 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDG---IYYCPHHPQ-----GSVEE 99 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSE---EEEECCBTT-----CSSGG
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccc---eeecccccc-----ccccc
Confidence 44899999999999999999999865210 01111122221100 000000000 00000
Q ss_pred HhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee--eEeccc---hHHHhhccCEEecCCCchhH
Q 002430 559 LIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAVADA---TDAARSASDIVLTEPGLSVI 633 (923)
Q Consensus 559 ~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG--Iamg~g---td~A~~aADivl~~~~~~~i 633 (923)
..+...+..-.|.-=..+.+.+.-.-..+.||||..+|..|=+.|+++ +.+..| .+.....||+++ +++..+
T Consensus 100 -~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 100 -FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp -GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred -ccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHH
Confidence 000001122234444455555554445689999999999999999985 444322 345566799998 678888
Q ss_pred HHHHH
Q 002430 634 ISAVL 638 (923)
Q Consensus 634 ~~~i~ 638 (923)
+..|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88774
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.09 E-value=0.0052 Score=60.60 Aligned_cols=124 Identities=17% Similarity=0.136 Sum_probs=78.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
+|.||+.++++.|+ .|+++.++|+........+.+.+|+.... + .++ +.+.. ....-.|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f-d-~i~-~s~~~----------------~~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF-D-SIT-TSEEA----------------GFFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC-S-EEE-EHHHH----------------TBCTTSHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccc-c-ccc-ccccc----------------cccchhhH
Confidence 46899999999997 58999999998888889999999985321 1 111 00000 00111111
Q ss_pred hHHHHHHHHhhCCCEEEEEcCC-ccChHhhhcCCeeeE-ec--cchHHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDG-VNDAPALKKADIGIA-VA--DATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG-~NDapaLk~AdVGIa-mg--~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
-=..+.+.+.-....++|+||. .||..+-++|++-.. +. .........+|+++ ++++.++..++
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHH
Confidence 1123334443334569999997 699999888887532 22 22223445789988 56788887774
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.88 E-value=0.0017 Score=62.85 Aligned_cols=118 Identities=15% Similarity=0.100 Sum_probs=75.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++.|+++.++|+... .+..+-++.|+.... ..+.+.+.. ....-.|+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f---~~i~~s~~~----------------~~~Kp~~~ 141 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF---TEILTSQSG----------------FVRKPSPE 141 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE---EEEECGGGC----------------CCCTTSSH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc---ccccccccc----------------cccchhHH
Confidence 3579999999999999999999998554 456778889985321 111111110 01112344
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee-eEeccchHHHhhccCEEecCCCchhHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLTEPGLSVIISA 636 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG-Iamg~gtd~A~~aADivl~~~~~~~i~~~ 636 (923)
-=..+.+.+.-....|+||||+.+|..+-++|++- |++..++ ..+|..+ +++..+...
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~----~~~~~~~--~~~~dl~~l 200 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST----YEGNHRI--QALADISRI 200 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS----CTTEEEC--SSTTHHHHH
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCC----CCcCeec--CCHHHHHHH
Confidence 44455555554456799999999999999999984 3444443 2355554 344444443
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.72 E-value=0.0011 Score=64.63 Aligned_cols=120 Identities=10% Similarity=0.063 Sum_probs=78.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++ ++++.++|+-....+..+.++.|+.... ..+.+.+.. ....-.|+
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f---~~i~~~~~~----------------~~~KP~p~ 141 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM---AVTISADDT----------------PKRKPDPL 141 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE---EEEECGGGS----------------SCCTTSSH
T ss_pred ccccchhhhhhhhcc-cccccccccccccccccccccccccccc---ccccccccc----------------ccchhhhh
Confidence 356899999999975 7999999999999999999998875321 111111100 01111234
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe---ccchHHHhhccCEEecCCCchhHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVII 634 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam---g~gtd~A~~aADivl~~~~~~~i~ 634 (923)
--..+++.++-....|.|+||..+|..+-++|++.... |..+....+.+|.++ +++..++
T Consensus 142 ~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll 204 (207)
T d2hdoa1 142 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDIL 204 (207)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGG
T ss_pred hhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHHH
Confidence 33455555543345689999999999999999887654 323333455788887 4555544
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.44 E-value=0.0097 Score=58.61 Aligned_cols=117 Identities=15% Similarity=0.046 Sum_probs=74.6
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
-.+.||+.+++++|++.|+++.++|+..........+.+|+..-. +...... +.. ....-.|
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~-~~~~~~~-d~~----------------~~~KP~p 187 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHF-DTK----------------IGHKVES 187 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEE-CGG----------------GCCTTCH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhh-hhcceee-ccc----------------cccCCCc
Confidence 457899999999999999999999999999988888888874311 1000000 000 0011122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe----cc-chHHHhhccCEEec
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----AD-ATDAARSASDIVLT 626 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam----g~-gtd~A~~aADivl~ 626 (923)
+-=....+.+.-....|+|+||..+|+.+-++|++-... |+ ...-....++.++.
T Consensus 188 ~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 188 ESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred HHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 222334444444456799999999999999999985444 21 12123335677663
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.40 E-value=0.0091 Score=55.73 Aligned_cols=88 Identities=10% Similarity=0.015 Sum_probs=61.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCC-hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~-~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
++.|++.++++.|++.|+++.++|+-+ ...+...-+..++.... . .+++.-.|
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~--~------------------------~~~~~~kp 99 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYF--I------------------------QREIYPGS 99 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGC--S------------------------EEEESSSC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccc--e------------------------eeecccCC
Confidence 478999999999999999999999654 45666666666653210 0 01222223
Q ss_pred --hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe
Q 002430 572 --EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606 (923)
Q Consensus 572 --~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV 606 (923)
+.-..+.+.+.-..+.+.|+||..+|..+-++|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~ 136 (164)
T d1u7pa_ 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGV 136 (164)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred ChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 33334455554455679999999999999999977
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.95 E-value=0.017 Score=54.84 Aligned_cols=109 Identities=13% Similarity=0.044 Sum_probs=67.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+++.++.|++.|+++.++|+-+..+. ++-+.+|+.... ...+ +.+... ...-.|+
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~f--d~i~-~~~~~~----------------~~KP~p~ 138 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYF--TEVV-TSSSGF----------------KRKPNPE 138 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGE--EEEE-CGGGCC----------------CCTTSCH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccc--cccc-cccccc----------------ccCCCHH
Confidence 4679999999999999999999998766554 567788875321 1111 111100 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCE
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 623 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADi 623 (923)
--..+.+.+.- ..+.|+||..+|..|-++|++=...-++..-.++.-||
T Consensus 139 ~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 139 SMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 33333444432 34899999999999999998764433445555655553
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.84 E-value=0.034 Score=48.34 Aligned_cols=103 Identities=17% Similarity=0.208 Sum_probs=68.0
Q ss_pred CChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHh
Q 002430 358 VEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILAL 437 (923)
Q Consensus 358 ~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~ 437 (923)
.++++++.+++..+..++ ||+..|++.++.+..-.....+..+..|-.. + .|+ .+.-|+++.+.+.
T Consensus 10 ~~e~elL~~aaslE~~S~-HPlA~AIv~~a~~~~~~~~~~~~~~~~~G~G------i-----~g~--~v~vG~~~~~~~~ 75 (113)
T d2b8ea2 10 GDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIAGEG------V-----VAD--GILVGNKRLMEDF 75 (113)
T ss_dssp SCHHHHHHHHHHHTTTCC-SHHHHHHHHHHHTTTCCCCCCSCEEEETTTE------E-----EET--TEEEECHHHHHHT
T ss_pred CCHHHHHHHHHHHHCcCC-CchHHHHHHHHHHhcCCCCccccceeeccce------E-----EeE--EEEECcHHHHHhc
Confidence 478899999888776666 9999999998754321111222222222111 1 011 1445999987653
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEecc
Q 002430 438 CNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPL 490 (923)
Q Consensus 438 ~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i 490 (923)
. -...+.+++.++.+..+|..++.++... +++|++++
T Consensus 76 ~---~~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 76 G---VAVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp T---CCCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred C---CCCCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 2 1234567788899999999999999876 88999876
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.29 E-value=0.0088 Score=54.57 Aligned_cols=95 Identities=12% Similarity=-0.004 Sum_probs=59.6
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChH----HHHHHHH------H-hCCCCCCCCCCcccCcccccccCcchHHHH
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLA----IGKETGR------R-LGMGTNMYPSSSLLGQDKDASIAALPVDEL 559 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~----tA~~ia~------~-~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~ 559 (923)
+|+|.|++.+.++.|++.|+++.++||-+.. |...+.. . .+... ..+....
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~-----~~~~~~~------------- 95 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-----VMQCQRE------------- 95 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-----SEEEECC-------------
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcE-----EEeeccc-------------
Confidence 5789999999999999999999999997532 1111111 0 01000 0000000
Q ss_pred hhhcCeEEecChhhHHHHHHHHhhC-CCEEEEEcCCccChHhhhcCCee
Q 002430 560 IEKADGFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 560 ~~~~~vfar~sP~~K~~iV~~lq~~-g~~V~m~GDG~NDapaLk~AdVG 607 (923)
.--.|-.++-|..+.+.+... ..+++|+||-..|+.|.+++++=
T Consensus 96 ----~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 96 ----QGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp ----TTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ----ccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 000122245677777777655 45678899999999999998763
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.24 E-value=0.032 Score=55.08 Aligned_cols=124 Identities=11% Similarity=0.122 Sum_probs=78.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++ |+++.++|+.........-+++|+... + ..++...+.. .+.-.|+
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~-f-d~i~~s~~~~-----------------~~KP~p~ 168 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY-F-DAIVIGGEQK-----------------EEKPAPS 168 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG-C-SEEEEGGGSS-----------------SCTTCHH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccc-c-cccccccccc-----------------cchhhhh
Confidence 367999999999985 899999999999989999999998532 1 1111111000 0011111
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-cChHhhhcCCee-eEec--cc--hHHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG-IAVA--DA--TDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~-NDapaLk~AdVG-Iamg--~g--td~A~~aADivl~~~~~~~i~~~i~ 638 (923)
-=..+.+.+.-...-+.|+||.. +|..+-+.|++. +..- .+ .......+|+++ +++..+...++
T Consensus 169 ~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~ 238 (247)
T d2gfha1 169 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHH
T ss_pred hHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEE--CCHHHHHHHHH
Confidence 11233333333334588999996 899999999995 5432 11 112233578888 46777777764
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.16 E-value=0.025 Score=54.81 Aligned_cols=141 Identities=15% Similarity=0.176 Sum_probs=90.8
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCc-ccCcc----cc----------cccCcchH---
Q 002430 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSS-LLGQD----KD----------ASIAALPV--- 556 (923)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~-l~~~~----~~----------~~~~~~~~--- 556 (923)
=||+.++++.++++ ....++|---..-..++|+.+|+.-+.+.... +...+ ++ .+.+.+++
T Consensus 83 vpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e~ 161 (308)
T d1y8aa1 83 VPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFRK 161 (308)
T ss_dssp CTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred cCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHHH
Confidence 48999999999887 67778877778889999999999633111110 00000 00 00111111
Q ss_pred ----------HHHhhhcCeEEecChhhHHHHHHHHhhC-C-CEEEEEcCCccChHhhhcCCe--eeEec-cchHHHhhcc
Q 002430 557 ----------DELIEKADGFAGVFPEHKYEIVKRLQER-K-HICGMTGDGVNDAPALKKADI--GIAVA-DATDAARSAS 621 (923)
Q Consensus 557 ----------~~~~~~~~vfar~sP~~K~~iV~~lq~~-g-~~V~m~GDG~NDapaLk~AdV--GIamg-~gtd~A~~aA 621 (923)
.++++++... --..|..+++..-.. + ..-+.+||.+.|..+|+.|.= |+|++ +|.+=|...|
T Consensus 162 ~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA 238 (308)
T d1y8aa1 162 LDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHA 238 (308)
T ss_dssp HHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTC
T ss_pred HHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCcccccccc
Confidence 1222222211 125566666544332 2 223789999999999998854 99998 9999999999
Q ss_pred CEEecCCCchhHHHHHHH
Q 002430 622 DIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 622 Divl~~~~~~~i~~~i~~ 639 (923)
|+++..++...+...+..
T Consensus 239 ~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 239 DVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp SEEEECSSTHHHHHHHHH
T ss_pred ceEEeccchhHHHHHHHH
Confidence 999999988777766643
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.14 E-value=0.028 Score=54.19 Aligned_cols=91 Identities=19% Similarity=0.253 Sum_probs=63.3
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCC----hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEec
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~----~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 569 (923)
+-|++.+.++.+++.|++|.-|||.. ..|+++.-+.+|+.........+.+.+ -
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~----------------------~ 144 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK----------------------P 144 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC----------------------T
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC----------------------C
Confidence 45799999999999999999999964 467788888899864321111111110 0
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEe
Q 002430 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 610 (923)
Q Consensus 570 sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIam 610 (923)
..+.|...|+. -.+++++||..+|..+-++|++ +|-+
T Consensus 145 ~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 145 GQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp TCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 12345555543 3589999999999999998885 4444
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=92.56 E-value=0.045 Score=52.90 Aligned_cols=112 Identities=7% Similarity=0.006 Sum_probs=69.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
.++-||+.+.++.|++.|+++.++|+... +...-+..|+.... + ..+.+.+. ....-.|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f-~-~i~~~~~~-----------------~~~KP~~ 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF-D-AIADPAEV-----------------AASKPAP 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC-S-EECCTTTS-----------------SSCTTST
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccc-c-cccccccc-----------------cccccCh
Confidence 45678999999999999999999999765 46677788875321 1 11111100 0111112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEeccchHHHhhccCEEec
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLT 626 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~gtd~A~~aADivl~ 626 (923)
+-=....+.++-..+-|+|+||..+|..|-+.|++ .|+++.+. ....++.++.
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~--~~~~~~~~~~ 202 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPE--DLGDDIVIVP 202 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHH--HHCSSSEEES
T ss_pred HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChh--hcccccEEcC
Confidence 21122333333334568999999999999999986 45555433 2335666663
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.35 E-value=0.13 Score=49.41 Aligned_cols=122 Identities=9% Similarity=0.053 Sum_probs=75.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
.+.|++.+.+++|+ .+..++|+-....+..+-+++|+.... +.....+.+.. ..+..|+
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~-----------------~~~~KP~ 143 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSAKDLG-----------------ADRVKPK 143 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEHHHHC-----------------TTCCTTS
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhccccccccc-ceeeccccccc-----------------ccccccC
Confidence 46788888887765 455789999999999999999986421 11111000000 0012232
Q ss_pred --hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee-eEeccch--------HHHhhccCEEecCCCchhHHHHH
Q 002430 573 --HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT--------DAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 --~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG-Iamg~gt--------d~A~~aADivl~~~~~~~i~~~i 637 (923)
.=....+.+.-....+.|+||..+|..+=+.|++- |++..|. +....-||+++ +++..+..++
T Consensus 144 ~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll 217 (222)
T d2fdra1 144 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVI 217 (222)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHH
T ss_pred HHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 22334444444456799999999999999999973 4553321 12333499999 5677776655
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=90.55 E-value=0.044 Score=54.59 Aligned_cols=36 Identities=11% Similarity=0.133 Sum_probs=29.9
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHh
Q 002430 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (923)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~ 530 (923)
=|++.++|++|+++|++++.+|+....+...+++++
T Consensus 20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 378999999999999999999987766666666554
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.09 E-value=0.12 Score=49.62 Aligned_cols=106 Identities=9% Similarity=0.042 Sum_probs=66.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccC----ChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD----~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
.++|++.+.++.|++.|+++.++|+- ............|+..-. +.+.+.+.. ....
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f---d~i~~s~~~----------------~~~K 157 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF---DFLIESCQV----------------GMIK 157 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC---SEEEEHHHH----------------SCCT
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh---ceeeehhhc----------------cCCC
Confidence 46799999999999999999999962 333444455555653210 011110000 0112
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEeccchHHH
Q 002430 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAA 617 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~gtd~A 617 (923)
-.|+--....+.++-...-+.|+||..+|..+-++|++ +|.+..+.+..
T Consensus 158 P~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~ 207 (222)
T d1cr6a1 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASAL 207 (222)
T ss_dssp TCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHH
T ss_pred CChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHH
Confidence 23444455666666555668999999999999999997 55555554443
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=90.08 E-value=0.28 Score=48.48 Aligned_cols=61 Identities=30% Similarity=0.351 Sum_probs=40.5
Q ss_pred HHHHHHHhhCCCEEEEEcCCc-cChHhhhcCCe-eeEeccc----hHHHh--hccCEEecCCCchhHHHHH
Q 002430 575 YEIVKRLQERKHICGMTGDGV-NDAPALKKADI-GIAVADA----TDAAR--SASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 575 ~~iV~~lq~~g~~V~m~GDG~-NDapaLk~AdV-GIamg~g----td~A~--~aADivl~~~~~~~i~~~i 637 (923)
....+.+.-....++||||.. ||..+-++|++ +|.+..| .+.-. ..+|+++ +++..+..+|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHh
Confidence 344444443456789999996 69999999997 6666322 22211 1249998 5788887776
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=89.56 E-value=0.12 Score=49.50 Aligned_cols=122 Identities=8% Similarity=0.059 Sum_probs=77.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
.+.+++.++++.+++.|+++.++|+-........-+..|+.... ..++...+.. ...-.|+
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~~~-----------------~~KP~p~ 153 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPVQ-----------------VYKPDNR 153 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGGT-----------------CCTTSHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc--cceeeeeeee-----------------ccccHHH
Confidence 45689999999999999999999999999888888888775311 1111111000 1111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE-ec-c--chHHHhhccCEEecCCCchhHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VA-D--ATDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa-mg-~--gtd~A~~aADivl~~~~~~~i~~ 635 (923)
-=..+.+.+.-.-..|+|+||..+|+-+=++|++--. +. . ..+-....+|+++ +++..+++
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHh
Confidence 2233444444344569999999999999999987644 32 1 1111234579988 56766654
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.36 E-value=0.075 Score=51.54 Aligned_cols=46 Identities=22% Similarity=0.328 Sum_probs=32.5
Q ss_pred hHHHHHHHHhh-CCCEEEEEcC----CccChHhhhcCC-eeeEeccchHHHh
Q 002430 573 HKYEIVKRLQE-RKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAAR 618 (923)
Q Consensus 573 ~K~~iV~~lq~-~g~~V~m~GD----G~NDapaLk~Ad-VGIamg~gtd~A~ 618 (923)
+|..-++.|.+ ...-|.++|| |.||.+||+.|+ .|+++++..++-+
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~ 236 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRR 236 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHHH
Confidence 45555555543 3467899999 889999999997 7888887666544
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=88.09 E-value=0.32 Score=46.73 Aligned_cols=24 Identities=25% Similarity=0.272 Sum_probs=22.6
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcc
Q 002430 494 PRHDSAETIRRALNLGVNVKMITG 517 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTG 517 (923)
+-|++.++|++|+++|+++.++|.
T Consensus 49 l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 49 LRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp BCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred ecccHHHHHHHHHhhCCeEEEecc
Confidence 569999999999999999999995
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=86.45 E-value=0.81 Score=43.99 Aligned_cols=124 Identities=15% Similarity=0.120 Sum_probs=75.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
.++-+++.+++++|+ |+++.++|..+...+...-+..|+.... ..++.+.+.. .+.-.|
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f--d~v~~s~~~~-----------------~~KP~p 150 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAKR-----------------VFKPHP 150 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTSH
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc--cccccccccc-----------------ccCccH
Confidence 356789999999886 7889999999998888888888875321 1111111100 111112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee-eEec-cchHH-H------------------------hhccCEE
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVA-DATDA-A------------------------RSASDIV 624 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG-Iamg-~gtd~-A------------------------~~aADiv 624 (923)
+-=..+++.+.-+-+-|.||||..+|.-+=++|++- |.+. .+... . ....|++
T Consensus 151 ~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~ 230 (245)
T d1qq5a_ 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFV 230 (245)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEE
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEE
Confidence 211233444433334589999999999999998853 2232 11110 0 1247999
Q ss_pred ecCCCchhHHHHHH
Q 002430 625 LTEPGLSVIISAVL 638 (923)
Q Consensus 625 l~~~~~~~i~~~i~ 638 (923)
+ +++..++.+|+
T Consensus 231 i--~~l~el~~lv~ 242 (245)
T d1qq5a_ 231 V--PALGDLPRLVR 242 (245)
T ss_dssp E--SSGGGHHHHHH
T ss_pred E--CCHHHHHHHHH
Confidence 8 67888888774
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.03 E-value=0.25 Score=46.83 Aligned_cols=104 Identities=10% Similarity=0.008 Sum_probs=59.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHH----HHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIG----KETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA----~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
++.+++.+.++.|++.|+++.++|+...... .......++... . ..++. .+.. ....
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~-f-d~i~~-s~~~----------------~~~K 159 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH-F-DFLIE-SCQV----------------GMVK 159 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT-S-SEEEE-HHHH----------------TCCT
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh-c-cEEEe-cccc----------------ccch
Confidence 3578999999999999999999997543222 222222232110 0 00010 0000 0001
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEeccchH
Q 002430 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATD 615 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~gtd 615 (923)
-.|+-=..+.+.+.-...-+.|+||...|+.+-++|++ +|.+.++.+
T Consensus 160 P~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~ 207 (225)
T d1zd3a1 160 PEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT 207 (225)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHH
T ss_pred hHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcch
Confidence 11222234444444333558899999999999999999 666654443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=82.79 E-value=0.34 Score=47.61 Aligned_cols=47 Identities=15% Similarity=0.179 Sum_probs=32.0
Q ss_pred EeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHH---HHHhCCC
Q 002430 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET---GRRLGMG 533 (923)
Q Consensus 487 ~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~i---a~~~Gi~ 533 (923)
.+.-.+.+=|++.++|+.|+++|++++.+|+....+...+ =+++|+.
T Consensus 13 TL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 13 VLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred eeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 3333444447899999999999999999996553333333 3456764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=81.50 E-value=0.93 Score=44.37 Aligned_cols=41 Identities=29% Similarity=0.282 Sum_probs=30.4
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcc-ChHhhhcCCe-eeEec
Q 002430 571 PEHKYEIVKRLQERKHICGMTGDGVN-DAPALKKADI-GIAVA 611 (923)
Q Consensus 571 P~~K~~iV~~lq~~g~~V~m~GDG~N-DapaLk~AdV-GIamg 611 (923)
|+--..+.+.++-....|+||||..+ |..+-++|++ +|.+.
T Consensus 183 p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~ 225 (253)
T d1wvia_ 183 AVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT 225 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred cccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEEC
Confidence 44444555566545567999999976 9999999999 77773
|