Citrus Sinensis ID: 002516

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910---

MGSVEEKIKAGGLVIRAQTTLLEEMKLLKEMQDQSGARKAINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDEIYAQMSLQPVNSEKDVFPIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAASNRSQFTIFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIETPESLFIFPSLTSGLKRPFHSGILATETEWGSLIKRPLACPEIAPGVMPYSSISNLCSEQLIKMMLKPQLVNNPGSFAASSLQETSGAKGAHLEEVKTLQSTINQKPRLVPSEMNRIDNQNCSQICLNQADTVNSSLSRINIPEKPHPPSKCEKQAPPGMNTDHLKSEPRQSIEQSSNLTSAADCSMEKPSGPLNPQNLVNQHAFHNQNEGLLQLQSSWPMQSQLESVFQAQQINVPQSDSTAHSGSLPILDTDEWMSHTSCNSLAGTYNRSPGPLPMFGLQEPSTMLPEVINPSLSFPGQEMWDHQLNNLRFLSPVDPLTSFTQQDHCSLNSSGLRDLSDESNNQSGIYSCLNIDVSNGGSTMIDHSVSSAILDEFCTLKDANFQNPPDCLMNTFSSSQDVQSQITSASLADSQAFSRQDFPDNSGGTSSSNVDFDESSLLQNTSWQPVVPPMRTYTKVQKTGSVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPQEVEQMSEEGMKLLNSAAMQGIDCTKPEGGRA

ccccHHHccccccccHHHHHHHHHHHHcccccccccccccccHHHHHHcccccccccccccEEEEcccccHccccccccccEEEEEEcccccccccccccccccccccccccEEEEEEcccccccccccccccccHHHHccccccccccccEEEEEEEccccEEEEEEEECcccccEEEcccccccccccccccccEEEEEEcccccEEEEEEEEccccccccccccccccccHHHHHHHHHHHcccccEEEEEccccccccEEEEHHHHHHHHHccccccccEEEEEEccccccCEEEEEEEEECcccccccccccccccEEEEccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccHHHcccccccHHHHHHHHHHHHccccccccccccccEEEEEEccccEEEcccccHHHHHHHccEEEEEcHHHHHcccHHHHHHHcccccccccccccccccc

**************************************KAINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDEIYAQMSLQ************************FFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQT*******SAD*MHIGVLAAAAHAASNRSQFTIFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIETPESLFIFPSLTSGLKR****************I***************YSSISNLCSEQLIKMMLKPQL*********************************************************************************************************************************************************************************************************************************************************************************************************************LK***********************************************************************PMRTYTKVQKTGSVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPQE******************************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Auxin response factor 5	Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Seems to act as transcriptional activator. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression. Mediates embryo axis formation and vascular tissues differentiation. Functionally redundant with ARF7. May be necessary to counteract AMP1 activity.	probable	P93024

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1WID, chain A
Confidence level:confident
Coverage over the Query: 108-224
View the alignment between query and template
View the model in PyMOL