Citrus Sinensis ID: 002536

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-
MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTVDSSTLDSETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTVGSSENLKGDNSVHRGEDPTTSGGDGRVGLESNQDSMDSLSVSVQRQGTRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNDRRLLASHCCNLQLSFGEESEIRHFATGLYHVIATEQVLFFLLLSTKMSTHEHVIRTPESLIFSLDFVPV
cccccccEEEcccccccccccccccccccccccccCEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccHHHHHHccccccccccccccccccccccccccccEEEEEEEccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccEEccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEcccEEEEcccccEEEEEEcccccccccccccccccHcccccHHHHHHHHHccccccccccccccCEECcccccccEEccccEEEEEcccccccccHHHHHHHHHccccccccEEcccccccccccccccccccccccccHHHHHHHccccccccccEEEEEEEEEEEccccccEEEEEcccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEEEEccccccccccccccccccccccccccc
***GTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPA*****************************************FPETTFKTISGASVSANVSTARTGNQSALFASDVQ**********SFAAIPLQ****************************************************************************************HTMGSGWMERFFLHPVTRLAWQV************************NSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYE********************************************************FTCEIVEE****TGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTL**************************************************ESN*D********************************LRKKLFPWSYDWHREEPCIDERMV**************DHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDR*************************LDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNDRRLLASHCCNLQLSFGEESEIRHFATGLYHVIATEQVLFFLLLSTKMSTHEHVIRTPESLIFSLDFV**
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MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTVDSSTLDSETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTVGSSENLKGDNSVHRGEDPTTSGGDGRVGLESNQDSMDSLSVSVQRQGTRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNDRRLLASHCCNLQLSFGEESEIRHFATGLYHVIATEQVLFFLLLSTKMSTHEHVIRTPESLIFSLDFVPV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein phosphatase 2C 32 Involved in the regulation of pedicel length and of CLAVATA pathways controlling stem cell identity at shoot and flower meristems.probableQ8RWN7

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.1.-.-Acting on ester bonds.probable
3.1.3.-Phosphoric monoester hydrolases.probable
3.1.3.16Phosphoprotein phosphatase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2PNQ, chain A
Confidence level:confident
Coverage over the Query: 699-754,766-824
View the alignment between query and template
View the model in PyMOL
Template: 2I0O, chain A
Confidence level:confident
Coverage over the Query: 695-755,767-839
View the alignment between query and template
View the model in PyMOL
Template: 2I44, chain A
Confidence level:probable
Coverage over the Query: 548-697,724-755,775-844
View the alignment between query and template
View the model in PyMOL
Template: 2PNQ, chain A
Confidence level:probable
Coverage over the Query: 699-754,766-824
View the alignment between query and template
View the model in PyMOL