Citrus Sinensis ID: 002536

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-

MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTVDSSTLDSETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTVGSSENLKGDNSVHRGEDPTTSGGDGRVGLESNQDSMDSLSVSVQRQGTRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNDRRLLASHCCNLQLSFGEESEIRHFATGLYHVIATEQVLFFLLLSTKMSTHEHVIRTPESLIFSLDFVPV

cccccccEEEcccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccHHHHHHccccccccccccccccccccccccccccEEEEEEEccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccEEccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEcccEEEEcccccEEEEEEccccccccccccccccHHHccccHHHHHHHHHccccccccccccccEEEEcccccccEEccccEEEEEcccccccccHHHHHHHHHccccccccEEcccccccccccccccccccccccccHHHHHHHccccccccccEEEEEEEEEEEccccccEEEEEcccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEEEEccccccccccccccccccccccccccc

cccccEEEEEcccccccccccEEEEcccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccEEEccccccccHHHHHHHcccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcHHHHHHHccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccEEEEcccccccEEEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHccHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccEEEEcccccccccEcccccccccccEEEEHHccccccccccccEEEcccccccccHHHcccccccccHHHcccccccccccccccccccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccEEEEEEEEcccEEEEEcccccEEEEEEcccccEEEEEccccccccccccHHHHcHHHHHHccHHHcccccccccccccccccccccccEEEEEEccccccccHHHHHHHHHHHccccccEEEEEEEEEEEEEEEcHcHHHcccccHcHHHHHHccccccccccEEEEccEEEEEEcccccEEEEEEcccHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHccccccccccccccEEEEEEEEcccccccccccccccccHHHHHHHccccc

mgngtsrvvgcfvpfngksgvdleflepldeglghsfcyvrpsifdspaitpsnserftvdsstldsetlsgsfrhdslddpsglhkpksfpettfktisgasvsanvstartgnqsalfasdvqepaasfestasfaaiplqpvprgsgplngfmsgplergfasgpldrgggfmsgpiergvmsgpldasdksnfsaplargrrrprlhrlmrsvsgpmrntlsrtfskhtmgsgwmerfflhPVTRLAWQVKEAKYRSEAQRncleggpsegeygnscnlqwahgkagedRVHVVLSEEQGWLFIgiydgfsgpdapdfLMSHLYRAIDKELEGLLwdyedksptdhpelghpkcqnagisvegtkvdqpelclnkvsycnlkescnssgmsreqSFTCEIVeesgevtgctrngnitgrgrkSMRLYELLQIEswdgqgstlisdigperkgssdcqacqdtvgssenlkgdnsvhrgedpttsggdgrvglesnqdsmDSLSVSVQRQGTRKSLISSKIRKMYRKQKSLrkklfpwsydwhreepcidermvessgpirkcksgiiDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAIlaqerpndrhpnpsflkddsrhknrsrESLVRMELdriseespmhnqncqvnmmnknrdiSICRLKMRAVQlstdhstsVEEEIIRIkaehpddsqavfNDRVKGQLKVTRAfgagflkkptcNEALLEMFRVdyvgnapyvscipsivhhrlsssdrflvlssdglyqyfsnEEVVAHVTWFmenvpegdpAQYLIAELLFRAAKKNDRRLLASHCCnlqlsfgeeseIRHFATGLYHVIATEQVLFFLLLSTkmsthehvirtpeslifsldfvpv

MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFdspaitpsnserftvdsstldsETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSgpldasdksnfsaplargrrrprlhrlmrsvsgpmrntlsrtfsKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCeiveesgevtgctrngnitgrgrkSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTVgssenlkgdnsvhrgedpttsggdgrVGLESNQDSmdslsvsvqrqgtrkslisskirkmyrkqkslrkklfpwsydwhreepcidermvessgpiRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILaqerpndrhpnpsflkddsrhknrsreSLVRMeldriseespmhnqncqvnMMNKNRDISICRLKMRAVqlstdhstsVEEEIIRIkaehpddsqavFNDRVKGQLKVTrafgagflkkPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNDRRLLASHCCNLQLSFGEESEIRHFATGLYHVIATEQVLFFLLLSTKMSTHehvirtpeslifsldfvpv

MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTVDSSTLDSETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPaasfestasfaaIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSGPLDASDKSNFSAPlargrrrprlhrlmrSVSGPMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTVGSSENLKGDNSVHRGEDPTTSGGDGRVGLESNQDSMDSLSVSVQRQGTRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNDRRLLASHCCNLQLSFGEESEIRHFATGLYHVIATEQVLFFLLLSTKMSTHEHVIRTPESLIFSLDFVPV

******RVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFD*****************************************************************************************************************************************************************************************HTMGSGWMERFFLHPVTRLAWQVKEAKYR****************YGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYE*******************I*VEGTKVDQPELCLNKVSYCNLKE************FTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTL***************************************************************************************LRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAI*********************************************************RDISICRLKMRAVQL***********IIRI*********AVFNDRVKGQLKVTRAFGAGFLKKPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNDRRLLASHCCNLQLSFGEESEIRHFATGLYHVIATEQVLFFLLLSTKMSTHEHVIRTPESLIFSLDF***

***GTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPA*****************************************FPETTFKTISGASVSANVSTARTGNQSALFASDVQ**********SFAAIPLQ*******************************************************************************************************************************************LQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLW*************************************************************************CTRNGNITGRGRKSMRLYELLQ*************************************************************ESNQDS***********************************LFPWSYDWHREEPCI*************************RAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDR*************************LDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFME**********LIAELLFRAAKKNDRRLLASHCCNLQLS************GLYHVIATEQVLFFLLLSTKMSTHEHVI*******F****V**

MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTVDSSTLDSETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKES***********FTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGP***********QDTVGSSENLKGDNSVHRGEDPTTSGGDGRVGLESN******************SLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLK***********SLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQ*********EEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNDRRLLASHCCNLQLSFGEESEIRHFATGLYHVIATEQVLFFLLLSTKMSTHEHVIRTPESLIFSLDFVPV

**NGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPA*******************************************ETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPL*GFMSGPLERGFASGPLDRGGGFMSGPIERGVMS*************************RL*RSVSGPMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQV************************NSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYE*******************************************************SFTCEIVEE****TGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISD*******************************************RV****N*D************GTRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREE***DERMV**************DHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHN**CQVNMMNKNR*ISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNDRRLLASHCCNLQLSFGEESEIRHFATGLYHVIATEQVLFFLLLSTKMST***V*RTPESLIFSLDFVPV

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		911	2.2.26 [Sep-21-2011]
Q8RWN7		856	Protein phosphatase 2C 32	yes	no	0.867	0.922	0.663	0.0
Q9LQN6		662	Probable protein phosphat	no	no	0.301	0.415	0.531	4e-83
O82302		783	Protein phosphatase 2C 29	no	no	0.362	0.421	0.464	4e-82
Q9ZV25		654	Probable protein phosphat	no	no	0.265	0.370	0.550	1e-76
Q84T94		639	Protein phosphatase 2C 35	no	no	0.283	0.403	0.5	1e-76
Q9SR24		650	Probable protein phosphat	no	no	0.257	0.361	0.567	6e-76
Q6ZGY0		596	Probable protein phosphat	no	no	0.270	0.412	0.540	2e-75
Q9LZ86		674	Probable protein phosphat	no	no	0.305	0.412	0.483	2e-75
Q10NB9		631	Probable protein phosphat	no	no	0.279	0.404	0.478	1e-63
A3AZ89		593	Putative protein phosphat	no	no	0.273	0.419	0.487	6e-62

>sp\|Q8RWN7\|P2C32_ARATH Protein phosphatase 2C 32 OS=Arabidopsis thaliana GN=POL PE=1 SV=2	Back alignment and function desciption

 Score = 1109 bits (2869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/857 (66%), Positives = 666/857 (77%), Gaps = 67/857 (7%)

Query: 1   MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTV 60
           MGNGTSRVVGCFVP N K+GVDLEFLEPLDEGLGHSFCYVRPSIF+SP ITPSNSERFT+
Sbjct: 1   MGNGTSRVVGCFVPSNDKNGVDLEFLEPLDEGLGHSFCYVRPSIFESPDITPSNSERFTI 60

Query: 61  DSSTLDSETLSGSFRHDSLDDPSGL--HKPKSFPETTFKTISGASVSANVSTARTGNQSA 118
           DSST+DSETL+GSFR+D +DDPS L  H  K   ETTFK ISGASVSANVSTARTGNQ A
Sbjct: 61  DSSTIDSETLTGSFRNDIVDDPSFLNRHNSKGLAETTFKAISGASVSANVSTARTGNQMA 120

Query: 119 LFASDVQEPAASFESTASFAAIPLQPVPRG-SGPLNGFMSGPLERGFASGPLDRGGGFMS 177
           L +SDV EPAASFEST+SFA+IPLQP+PRG SGPLNGFMSGPLERGFASGPLDR  GFMS
Sbjct: 121 LCSSDVLEPAASFESTSSFASIPLQPLPRGGSGPLNGFMSGPLERGFASGPLDRNNGFMS 180

Query: 178 GPIERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSG 237
           GPIE+GVMSGPLD SD+SNFSAPL+  R++PR  R MRSVSGPM++TL+RTFS+ + G  
Sbjct: 181 GPIEKGVMSGPLDVSDRSNFSAPLSFRRKKPRFQRFMRSVSGPMKSTLARTFSRRSGGLS 240

Query: 238 WMERFFLHPVTRLAWQV-KEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVH 296
           WM RFFLHP TR++W V K+ K   E   +CLE         ++ NLQWAHGKAGEDRVH
Sbjct: 241 WMHRFFLHPETRVSWAVGKDGKLHGEDPESCLE---------SNRNLQWAHGKAGEDRVH 291

Query: 297 VVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKS------PTDH 350
           VVLSEEQGWLFIGIYDGFSGPDAPDF+MSHLY+AIDKELEGLLWDYE+ S      P   
Sbjct: 292 VVLSEEQGWLFIGIYDGFSGPDAPDFVMSHLYKAIDKELEGLLWDYEEPSEDNQLQPDQE 351

Query: 351 PELGHPKCQNAGISVEGTK---VDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEE 407
           P      C    IS + +K    +  E+ ++ +S     ++  + G              
Sbjct: 352 PPTEENMCDPESISEQHSKSVVAESEEVMIDDISSLGNTDTQIADGPP------------ 399

Query: 408 SGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTV 467
                     G+  G G+KSMRLYELLQ+E W+G+      +IG +R G           
Sbjct: 400 ----------GDSAGPGKKSMRLYELLQLEQWEGE------EIGLKRYGG---------- 433

Query: 468 GSSENLKGDNSVHRGEDPTTSGGD-GRVGLESNQDSMDSLSVSVQRQGTRKSLISSKIRK 526
               N+  +N  ++ E+P+TSGG  G     +++ ++D +  S QR GT+KS ISSKIR+
Sbjct: 434 ----NVALNNMTNQVENPSTSGGGAGNDPCTTDRSALDGIPNSGQRHGTKKSQISSKIRR 489

Query: 527 MYRKQKSLRKKLFPWSYDWHREEP-CIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALE 585
           MY+KQKSLRKKLFPWSYDWHREE  C++E++VESSGPIR+  SG +DHDAVLRAMA+ALE
Sbjct: 490 MYQKQKSLRKKLFPWSYDWHREEGICVEEKIVESSGPIRRRWSGTVDHDAVLRAMARALE 549

Query: 586 STEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPN 645
           STEEAYM+MVEK+LD NPELALMGSCVLVMLMKDQDVYVMN+GDSRAILAQER +DRH N
Sbjct: 550 STEEAYMDMVEKSLDINPELALMGSCVLVMLMKDQDVYVMNVGDSRAILAQERLHDRHSN 609

Query: 646 PSFLKDDS-RHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQ 704
           P F  D+   HK+RSRESLVR+ELDRISEESP+HNQ   +++ NKNRD++  RLKMRAVQ
Sbjct: 610 PGFGNDEGIGHKSRSRESLVRIELDRISEESPIHNQATPISVSNKNRDVTSYRLKMRAVQ 669

Query: 705 LSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKPTCNEALLEMF 764
           LS+DHSTSVEEEI RI++EHP+D Q++  DRVKGQLKVTRAFGAGFLKKP  NEALLEMF
Sbjct: 670 LSSDHSTSVEEEIWRIRSEHPEDDQSILKDRVKGQLKVTRAFGAGFLKKPNFNEALLEMF 729

Query: 765 RVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGD 824
           +V+Y+G  PY++C P  VHHRL+SSDRF+VLSSDGLY+YFSNEEVVAHVTWF+ENVPEGD
Sbjct: 730 QVEYIGTDPYITCEPCTVHHRLTSSDRFMVLSSDGLYEYFSNEEVVAHVTWFIENVPEGD 789

Query: 825 PAQYLIAELLFRAAKKN 841
           PAQYLIAELL RAA KN
Sbjct: 790 PAQYLIAELLSRAATKN 806

Involved in the regulation of pedicel length and of CLAVATA pathways controlling stem cell identity at shoot and flower meristems.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6

>sp\|Q9LQN6\|P2C04_ARATH Probable protein phosphatase 2C 4 OS=Arabidopsis thaliana GN=PLL5 PE=1 SV=1	Back alignment and function description

>sp\|O82302\|P2C29_ARATH Protein phosphatase 2C 29 OS=Arabidopsis thaliana GN=PLL1 PE=1 SV=2	Back alignment and function description

>sp\|Q9ZV25\|P2C23_ARATH Probable protein phosphatase 2C 23 OS=Arabidopsis thaliana GN=PLL4 PE=2 SV=1	Back alignment and function description

>sp\|Q84T94\|P2C35_ORYSJ Protein phosphatase 2C 35 OS=Oryza sativa subsp. japonica GN=XB15 PE=1 SV=1	Back alignment and function description

>sp\|Q9SR24\|P2C36_ARATH Probable protein phosphatase 2C 36 OS=Arabidopsis thaliana GN=PLL3 PE=2 SV=1	Back alignment and function description

>sp\|Q6ZGY0\|P2C26_ORYSJ Probable protein phosphatase 2C 26 OS=Oryza sativa subsp. japonica GN=Os02g0690500 PE=2 SV=1	Back alignment and function description

>sp\|Q9LZ86\|P2C66_ARATH Probable protein phosphatase 2C 66 OS=Arabidopsis thaliana GN=PLL2 PE=2 SV=1	Back alignment and function description

>sp\|Q10NB9\|P2C31_ORYSJ Probable protein phosphatase 2C 31 OS=Oryza sativa subsp. japonica GN=Os03g0275100 PE=2 SV=1	Back alignment and function description

>sp\|A3AZ89\|P2C46_ORYSJ Putative protein phosphatase 2C 46 OS=Oryza sativa subsp. japonica GN=Os05g0111800 PE=3 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		911
225437734		910	PREDICTED: protein phosphatase 2C 32-lik	0.920	0.921	0.763	0.0
255548189		907	protein phosphatase 2c, putative [Ricinu	0.917	0.921	0.764	0.0
224068295		882	predicted protein [Populus trichocarpa]	0.906	0.936	0.772	0.0
147855258		871	hypothetical protein VITISV_031357 [Viti	0.892	0.933	0.752	0.0
224130784		854	predicted protein [Populus trichocarpa]	0.892	0.951	0.771	0.0
356572864		887	PREDICTED: protein phosphatase 2C 32-lik	0.902	0.926	0.720	0.0
356505703		849	PREDICTED: protein phosphatase 2C 32-lik	0.883	0.948	0.733	0.0
3522957		814	unknown protein [Arabidopsis thaliana] g	0.867	0.970	0.663	0.0
30690550		856	membrane associated protein phosphatase	0.867	0.922	0.663	0.0
20260146		856	unknown protein [Arabidopsis thaliana]	0.867	0.922	0.662	0.0

>gi\|225437734\|ref\|XP_002280642.1\| PREDICTED: protein phosphatase 2C 32-like [Vitis vinifera]	Back alignment and taxonomy information

 Score = 1349 bits (3491), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 667/874 (76%), Positives = 734/874 (83%), Gaps = 35/874 (4%)

Query: 1   MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTV 60
           MGN TSRVVGCFVPFNGK GVDL+ LEPLDEGLGHSFCYVRP I DSPAITPSNSERFTV
Sbjct: 1   MGNSTSRVVGCFVPFNGKGGVDLDLLEPLDEGLGHSFCYVRPMILDSPAITPSNSERFTV 60

Query: 61  DSSTLDSETLSGSFRHDSLDDPSGLHKP-KSFPETTFKTISGASVSANVSTARTGNQSAL 119
           DSSTLDSETLSGSFRH+++DDPS +H+P K FPETTFK ISGASVSANVSTARTGN +AL
Sbjct: 61  DSSTLDSETLSGSFRHENIDDPSAVHRPNKCFPETTFKAISGASVSANVSTARTGNSNAL 120

Query: 120 FASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGP 179
           F SD QEPAASFEST+SFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPL+RGGGFMSGP
Sbjct: 121 FTSDAQEPAASFESTSSFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLERGGGFMSGP 180

Query: 180 IERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSGWM 239
           IE+GVMSGPLDA+DKSNFSAPLA GRRRP L RLMRSVSGPM++TLSRTFS+H++GS WM
Sbjct: 181 IEKGVMSGPLDATDKSNFSAPLAHGRRRPGLQRLMRSVSGPMKSTLSRTFSRHSIGSSWM 240

Query: 240 ERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVL 299
           +RFFLHPVT+ AW  +E K+R EA RNCL+ GPSEGEY  + NLQWAHGKAGEDRVHVVL
Sbjct: 241 QRFFLHPVTQFAWHPREPKFRPEAPRNCLDVGPSEGEYRKTHNLQWAHGKAGEDRVHVVL 300

Query: 300 SEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQ 359
           SEEQGWLFIGIYDGFSGPDAPDFLMSHLY+AIDKELEGLLWDYE+KS  D   L  P  +
Sbjct: 301 SEEQGWLFIGIYDGFSGPDAPDFLMSHLYKAIDKELEGLLWDYEEKSVNDLLNLELPMNR 360

Query: 360 NAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEESGEVTG------ 413
           +A +  E  K + P   LN+V    L+ESCN  G  R+    CEIVEE   V G      
Sbjct: 361 DATVDSECGKDNHPISQLNEVISGTLEESCNP-GTIRDHCSNCEIVEEKDGVRGVLELQS 419

Query: 414 -CTRNG------------NITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDC 460
            C + G            N+TG+GRKS RLYELLQ+ESWDG+ S  +S+ G +R+GS D 
Sbjct: 420 SCGKPGVLGVESIAAPTANLTGQGRKSKRLYELLQMESWDGESSLSVSEGGNQRRGSWDW 479

Query: 461 QACQDTVGSSENL-------------KGDNSVHRGEDPTTSGGDGRVGLESNQDSMDSLS 507
           Q   D + S   L             KGD+S    EDPTTSG +G + +ESN   +  LS
Sbjct: 480 QPSSDVLHSRGILQEEQLRSCSVTSTKGDSSSQYCEDPTTSGENGGIRMESNS-VLAPLS 538

Query: 508 VSVQRQGTRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCK 567
           VS QRQG RKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREE C+D+RM E+SGP+R+CK
Sbjct: 539 VSEQRQGMRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREETCVDDRMAETSGPVRRCK 598

Query: 568 SGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNL 627
           SG+IDHDAVLRAMA+ALE+TEEAYMEMVEKALD NPELALMGSCVLVMLMKDQDVYVMNL
Sbjct: 599 SGVIDHDAVLRAMARALETTEEAYMEMVEKALDKNPELALMGSCVLVMLMKDQDVYVMNL 658

Query: 628 GDSRAILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMM 687
           GDSR ILAQERPNDRHPNP+  KDD RH+NRSRESLVRMELDRISEESPMHNQNCQVN  
Sbjct: 659 GDSRVILAQERPNDRHPNPNLAKDDVRHRNRSRESLVRMELDRISEESPMHNQNCQVNKA 718

Query: 688 NKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFG 747
           NKNR+IS CRLKMRAVQLSTDHSTS+EEE++RIKAEH DD+QA+ NDRVKGQLKVTRAFG
Sbjct: 719 NKNREISFCRLKMRAVQLSTDHSTSIEEEVLRIKAEHVDDNQAILNDRVKGQLKVTRAFG 778

Query: 748 AGFLKKPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNE 807
           AGFLK+P CNEALLEMF++DYVG  PYVSCIPS++HHRLSSSDRFLVLSSDGLYQYFSNE
Sbjct: 779 AGFLKEPKCNEALLEMFQIDYVGTTPYVSCIPSVLHHRLSSSDRFLVLSSDGLYQYFSNE 838

Query: 808 EVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKN 841
           EVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKN
Sbjct: 839 EVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKN 872

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255548189\|ref\|XP_002515151.1\| protein phosphatase 2c, putative [Ricinus communis] gi\|223545631\|gb\|EEF47135.1\| protein phosphatase 2c, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224068295\|ref\|XP_002302697.1\| predicted protein [Populus trichocarpa] gi\|222844423\|gb\|EEE81970.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|147855258\|emb\|CAN83867.1\| hypothetical protein VITISV_031357 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224130784\|ref\|XP_002320925.1\| predicted protein [Populus trichocarpa] gi\|222861698\|gb\|EEE99240.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356572864\|ref\|XP_003554585.1\| PREDICTED: protein phosphatase 2C 32-like [Glycine max]	Back alignment and taxonomy information

>gi\|356505703\|ref\|XP_003521629.1\| PREDICTED: protein phosphatase 2C 32-like [Glycine max]	Back alignment and taxonomy information

>gi\|3522957\|gb\|AAC34239.1\| unknown protein [Arabidopsis thaliana] gi\|227202644\|dbj\|BAH56795.1\| AT2G46920 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi|30690550|ref|NP_850463.1| membrane associated protein phosphatase 2C [Arabidopsis thaliana] gi|30690552|ref|NP_850464.1| membrane associated protein phosphatase 2C [Arabidopsis thaliana] gi|332278134|sp|Q8RWN7.2|P2C32_ARATH RecName: Full=Protein phosphatase 2C 32; Short=AtPP2C32; AltName: Full=Protein POLTERGEIST; AltName: Full=Protein phosphatase 2C POL; Short=PP2C POL gi|330255678|gb|AEC10772.1| membrane associated protein phosphatase 2C [Arabidopsis thaliana] gi|330255679|gb|AEC10773.1| membrane associated protein phosphatase 2C [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|20260146\|gb\|AAM12971.1\| unknown protein [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		911
TAIR\|locus:2041444		856	POL "poltergeist" [Arabidopsis	0.406	0.432	0.726	3.5e-277
TAIR\|locus:2026605		662	PLL5 "pol-like 5" [Arabidopsis	0.186	0.256	0.589	2.4e-125
TAIR\|locus:2053265		654	PLL4 "poltergeist like 4" [Ara	0.187	0.261	0.576	2.6e-118
TAIR\|locus:2083539		650	PLL3 "pol-like 3" [Arabidopsis	0.196	0.275	0.575	3.6e-112
TAIR\|locus:2062481		783	PLL1 "poltergeist like 1" [Ara	0.374	0.435	0.468	1e-107
TAIR\|locus:2180152		674	PLL2 "pol-like 2" [Arabidopsis	0.182	0.246	0.563	1.9e-88
TAIR\|locus:2089293		493	AT3G16560 [Arabidopsis thalian	0.155	0.288	0.443	3.4e-40
TAIR\|locus:2081770		379	AT3G51370 [Arabidopsis thalian	0.152	0.366	0.358	5e-25
TAIR\|locus:2151256		370	AT5G02760 [Arabidopsis thalian	0.154	0.381	0.373	1.3e-24
TAIR\|locus:2118899		380	AT4G33920 [Arabidopsis thalian	0.152	0.365	0.351	2.6e-23

TAIR\|locus:2041444 POL "poltergeist" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1397 (496.8 bits), Expect = 3.5e-277, Sum P(2) = 3.5e-277
 Identities = 271/373 (72%), Positives = 321/373 (86%)

Query:   472 NLKGDNSVHRGEDPTTSGGD-GRVGLESNQDSMDSLSVSVQRQGTRKSLISSKIRKMYRK 530
             N+  +N  ++ E+P+TSGG  G     +++ ++D +  S QR GT+KS ISSKIR+MY+K
Sbjct:   434 NVALNNMTNQVENPSTSGGGAGNDPCTTDRSALDGIPNSGQRHGTKKSQISSKIRRMYQK 493

Query:   531 QKSLRKKLFPWSYDWHREEP-CIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEE 589
             QKSLRKKLFPWSYDWHREE  C++E++VESSGPIR+  SG +DHDAVLRAMA+ALESTEE
Sbjct:   494 QKSLRKKLFPWSYDWHREEGICVEEKIVESSGPIRRRWSGTVDHDAVLRAMARALESTEE 553

Query:   590 AYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFL 649
             AYM+MVEK+LD NPELALMGSCVLVMLMKDQDVYVMN+GDSRAILAQER +DRH NP F 
Sbjct:   554 AYMDMVEKSLDINPELALMGSCVLVMLMKDQDVYVMNVGDSRAILAQERLHDRHSNPGFG 613

Query:   650 KDDS-RHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTD 708
              D+   HK+RSRESLVR+ELDRISEESP+HNQ   +++ NKNRD++  RLKMRAVQLS+D
Sbjct:   614 NDEGIGHKSRSRESLVRIELDRISEESPIHNQATPISVSNKNRDVTSYRLKMRAVQLSSD 673

Query:   709 HSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKPTCNEALLEMFRVDY 768
             HSTSVEEEI RI++EHP+D Q++  DRVKGQLKVTRAFGAGFLKKP  NEALLEMF+V+Y
Sbjct:   674 HSTSVEEEIWRIRSEHPEDDQSILKDRVKGQLKVTRAFGAGFLKKPNFNEALLEMFQVEY 733

Query:   769 VGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQY 828
             +G  PY++C P  VHHRL+SSDRF+VLSSDGLY+YFSNEEVVAHVTWF+ENVPEGDPAQY
Sbjct:   734 IGTDPYITCEPCTVHHRLTSSDRFMVLSSDGLYEYFSNEEVVAHVTWFIENVPEGDPAQY 793

Query:   829 LIAELLFRAAKKN 841
             LIAELL RAA KN
Sbjct:   794 LIAELLSRAATKN 806

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS;IDA

GO:0005634 "nucleus" evidence=ISM;NAS

GO:0009934 "regulation of meristem structural organization" evidence=IGI

GO:0005886 "plasma membrane" evidence=IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IGI;RCA

GO:0010074 "maintenance of meristem identity" evidence=IGI;RCA

GO:0005543 "phospholipid binding" evidence=IDA

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006406 "mRNA export from nucleus" evidence=RCA

GO:0007155 "cell adhesion" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0043687 "post-translational protein modification" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR\|locus:2026605 PLL5 "pol-like 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2053265 PLL4 "poltergeist like 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2083539 PLL3 "pol-like 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2062481 PLL1 "poltergeist like 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2180152 PLL2 "pol-like 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2089293 AT3G16560 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2081770 AT3G51370 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2151256 AT5G02760 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2118899 AT4G33920 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8RWN7	P2C32_ARATH	3, ., 1, ., 3, ., 1, 6	0.6639	0.8671	0.9228	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3.16	0.991
3rd Layer	3.1.3	0.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pm.C_LG_II0836	hypothetical protein (882 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		911
cd00143		254	cd00143, PP2Cc, Serine/threonine phosphatases, fam	8e-30
smart00332		252	smart00332, PP2Cc, Serine/threonine phosphatases,	2e-24
pfam00481		252	pfam00481, PP2C, Protein phosphatase 2C	8e-19
PTZ00224		381	PTZ00224, PTZ00224, protein phosphatase 2C; Provis	2e-07
smart00332		252	smart00332, PP2Cc, Serine/threonine phosphatases,	1e-05
cd00143		254	cd00143, PP2Cc, Serine/threonine phosphatases, fam	8e-05
COG0631		262	COG0631, PTC1, Serine/threonine protein phosphatas	3e-04

>gnl\|CDD\|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity	Back alignment and domain information

 Score =  118 bits (298), Expect = 8e-30
 Identities = 63/270 (23%), Positives = 92/270 (34%), Gaps = 94/270 (34%)

Query: 572 DHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSR 631
             + +  A+ +A    +E  +E         P+ A  G+  +V L++   +YV N+G   
Sbjct: 67  SEEDIEEALRKAFLRADEEILEE----AQDEPDDARSGTTAVVALIRGNKLYVANVG--- 119

Query: 632 AILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNR 691
                               DSR                                     
Sbjct: 120 --------------------DSR------------------------------------- 122

Query: 692 DISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFL 751
              +CR    AVQL+ DH    EEE  RI+         V N RV G L VTRA G   L
Sbjct: 123 -AVLCR-NGEAVQLTKDHKPVNEEERERIEKAG----GRVSNGRVPGVLAVTRALGDFDL 176

Query: 752 KKPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNEEVVA 811
           K                    P VS  P +   +L+  D FL+L+SDGL+   SN+E V 
Sbjct: 177 K--------------------PGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVD 216

Query: 812 HVTWFMENVPEGDPAQYLIAELLFRAAKKN 841
                + +    +  Q    EL+  A ++ 
Sbjct: 217 ----IVRSELAKEDLQEAAQELVDLALRRG 242

Length = 254

>gnl\|CDD\|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain	Back alignment and domain information

>gnl\|CDD\|215938 pfam00481, PP2C, Protein phosphatase 2C	Back alignment and domain information

>gnl\|CDD\|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional	Back alignment and domain information

>gnl\|CDD\|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain	Back alignment and domain information

>gnl\|CDD\|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity	Back alignment and domain information

>gnl\|CDD\|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		911
KOG0700		390	consensus Protein phosphatase 2C/pyruvate dehydrog	100.0
KOG0698		330	consensus Serine/threonine protein phosphatase [Si	100.0
PLN03145		365	Protein phosphatase 2c; Provisional	100.0
PF00481		254	PP2C: Protein phosphatase 2C; InterPro: IPR001932	100.0
KOG0697		379	consensus Protein phosphatase 1B (formerly 2C) [Si	100.0
PTZ00224		381	protein phosphatase 2C; Provisional	100.0
KOG0699		542	consensus Serine/threonine protein phosphatase [Si	100.0
COG0631		262	PTC1 Serine/threonine protein phosphatase [Signal	99.97
smart00332		255	PP2Cc Serine/threonine phosphatases, family 2C, ca	99.96
KOG1323		493	consensus Serine/threonine phosphatase [Signal tra	99.96
cd00143		254	PP2Cc Serine/threonine phosphatases, family 2C, ca	99.96
PRK14559		645	putative protein serine/threonine phosphatase; Pro	99.94
KOG0618		1081	consensus Serine/threonine phosphatase 2C containi	99.63
KOG1379		330	consensus Serine/threonine protein phosphatase [Si	99.61
PF13672		212	PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A	99.31
smart00331		193	PP2C_SIG Sigma factor PP2C-like phosphatases.	99.24
PF07228		193	SpoIIE: Stage II sporulation protein E (SpoIIE); I	98.84
TIGR02865		764	spore_II_E stage II sporulation protein E. Stage I	98.73
COG2208		367	RsbU Serine phosphatase RsbU, regulator of sigma s	95.68
KOG0698		330	consensus Serine/threonine protein phosphatase [Si	95.23
PLN03145		365	Protein phosphatase 2c; Provisional	90.53
PTZ00224		381	protein phosphatase 2C; Provisional	89.58
PF00481		254	PP2C: Protein phosphatase 2C; InterPro: IPR001932	89.48
KOG0700		390	consensus Protein phosphatase 2C/pyruvate dehydrog	86.08

>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]	Back alignment and domain information

Probab=100.00  E-value=1.1e-78  Score=663.99  Aligned_cols=215  Identities=54%  Similarity=0.877  Sum_probs=206.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCceEEEEEEECCeEEEEEcccccEEEEEeCCCCCCCCCCCcccc
Q 002536          573 HDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDD  652 (911)
Q Consensus       573 ~~~Vl~AL~rAf~~teeafle~~dk~l~enpela~~GSTalVvLI~~~~LYVANVGDSRAVL~r~~~~~~~~~~~~~~~~  652 (911)
                      +..+++||.+||++||++|++++++++..+|+++.|||||+|++|++++|||||+|||||||++..+++           
T Consensus       166 ~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~-----------  234 (390)
T KOG0700|consen  166 HGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNG-----------  234 (390)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCC-----------
Confidence            456999999999999999999999999999999999999999999999999999999999998887321           


Q ss_pred             ccccccchhhhhhhhhhhccccCCcccccccccccccccchhhccccceEEEccccCCCChHHHHHHHHhcCCCCCceee
Q 002536          653 SRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVF  732 (911)
Q Consensus       653 ~~~~~~s~~~~~~~e~~rl~eesp~~~~~~~~~~~~~~~~~~~~~~~l~a~qLT~DHsps~eeE~~RI~~egpdd~~~i~  732 (911)
                                                                   ..|.++|||+||++++++|++||+.+||++..++.
T Consensus       235 ---------------------------------------------~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv  269 (390)
T KOG0700|consen  235 ---------------------------------------------SWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVV  269 (390)
T ss_pred             ---------------------------------------------CeEEEEecChhhccccHHHHHHHHHhCCCCcceEe
Confidence                                                         12699999999999999999999999999999998


Q ss_pred             cc--cccCccccccccCCCCcCCCcch-HHHHHhhhhccCCCCCceeecccceEEEecCCCeEEEEEcCccCCCCCHHHH
Q 002536          733 ND--RVKGQLKVTRAFGAGFLKKPTCN-EALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSNEEV  809 (911)
Q Consensus       733 n~--RV~G~L~VTRAFGD~~LKqpk~N-~~Lle~fri~y~gt~PyIS~ePdV~~~~L~~~D~FLVLASDGLwD~LSnEEV  809 (911)
                      +.  ||+|.|+|||||||++||++++| ++|++||+++|++++|||+|+|+|++|+|+++|+|||||||||||+||||||
T Consensus       270 ~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeea  349 (390)
T KOG0700|consen  270 NKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEA  349 (390)
T ss_pred             eccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHH
Confidence            87  99999999999999999999999 9999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhc-CCCCChHHHHHHHHHHHHHHHcCC
Q 002536          810 VAHVTWFMEN-VPEGDPAQYLIAELLFRAAKKNDR  843 (911)
Q Consensus       810 v~iV~~~~~~-~p~gdpaq~LiaelL~raAkk~G~  843 (911)
                      |.+|..|+.. .|.+++|++||.++|.++|+|++|
T Consensus       350 V~lV~~~i~~~~pd~~~A~hLIr~aL~~aakk~~~  384 (390)
T KOG0700|consen  350 VSLVHEFISGKFPDGNPATHLIRHALGRAAKKRGM  384 (390)
T ss_pred             HHHHHHhhccCCCCCCHHHHHHHHHHhhhhhhccc
Confidence            9999999987 899999999999999999999999

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]	Back alignment and domain information

>PLN03145 Protein phosphatase 2c; Provisional	Back alignment and domain information

>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg	Back alignment and domain information

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]	Back alignment and domain information

>PTZ00224 protein phosphatase 2C; Provisional	Back alignment and domain information

>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]	Back alignment and domain information

>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]	Back alignment and domain information

>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain	Back alignment and domain information

>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]	Back alignment and domain information

>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity	Back alignment and domain information

>PRK14559 putative protein serine/threonine phosphatase; Provisional	Back alignment and domain information

>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]	Back alignment and domain information

>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]	Back alignment and domain information

>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B	Back alignment and domain information

>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases	Back alignment and domain information

>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg	Back alignment and domain information

>TIGR02865 spore_II_E stage II sporulation protein E	Back alignment and domain information

>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]	Back alignment and domain information

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]	Back alignment and domain information

>PLN03145 Protein phosphatase 2c; Provisional	Back alignment and domain information

>PTZ00224 protein phosphatase 2C; Provisional	Back alignment and domain information

>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg	Back alignment and domain information

>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		911
2pnq_A		467	Crystal Structure Of Pyruvate Dehydrogenase Phospha		6e-10
3mq3_A		467	Crystal Structure Of Native Bovine Pdp1c Length = 4		6e-10

>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467

Back alignment and structure

Iteration: 1

Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 15/139 (10%) Query: 702 AVQLSTDHSTSVEEEIIRIKAEHPDD--SQAVFNDRVKGQLKVTRAFGAGFLK------- 752 AV LS DH+ E E+ R+K EHP + V DR+ G L RAFG K Sbjct: 236 AVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQK 295 Query: 753 ------KPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQYFSN 806 N+ F PY++ P + +HRL D+FLVL++DGL++ Sbjct: 296 RVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHR 355 Query: 807 EEVVAHVTWFMENVPEGDP 825 ++VV V ++ + P Sbjct: 356 QDVVRIVGEYLTGMHHQQP 374

PyMOL of 2pnq

>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		911
2pnq_A		467	[pyruvate dehydrogenase [lipoamide]]-phosphatase 1	7e-32
2pnq_A		467	[pyruvate dehydrogenase [lipoamide]]-phosphatase 1	5e-07
2j4o_A		401	Mitogen-activated protein kinase kinase kinase 7-i	1e-22
2j4o_A		401	Mitogen-activated protein kinase kinase kinase 7-i	2e-04
2p8e_A		307	PPM1B beta isoform variant 6; structural genomics,	2e-19
2p8e_A		307	PPM1B beta isoform variant 6; structural genomics,	3e-04
2i0o_A		304	Ser/Thr phosphatase; beta sandwich, structural gen	3e-19
2i0o_A		304	Ser/Thr phosphatase; beta sandwich, structural gen	2e-04
2i44_A		324	Serine-threonine phosphatase 2C; PSI-2, 8817Z, str	4e-19
3kdj_B		316	Protein phosphatase 2C 56; ABA, PYL1, abscisic aci	1e-17
1a6q_A		382	Phosphatase 2C; catalytic mechanism, metalloenzyme	3e-17
1a6q_A		382	Phosphatase 2C; catalytic mechanism, metalloenzyme	2e-04
3qn1_B		337	Protein phosphatase 2C 16; start domain, BET V dom	1e-16
3d8k_A		377	PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR	2e-15
2iq1_A		274	Protein phosphatase 2C kappa, PPM1K; structural ge	4e-15
2iq1_A		274	Protein phosphatase 2C kappa, PPM1K; structural ge	4e-04
4da1_A		389	Protein phosphatase 1K, mitochondrial; metal-ION-a	4e-14
4da1_A		389	Protein phosphatase 1K, mitochondrial; metal-ION-a	7e-04
2irm_A		358	Mitogen-activated protein kinase kinase kinase 7 i	5e-14
2isn_A		364	NYSGXRC-8828Z, phosphatase; pathogenic strain, pra	4e-12
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-07
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-06

>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467	Back alignment and structure

 Score =  129 bits (325), Expect = 7e-32
 Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 15/143 (10%)

Query: 699 KMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVF--NDRVKGQLKVTRAFGAGFLKKP-- 754
              AV LS DH+   E E+ R+K EHP +        DR+ G L   RAFG    K    
Sbjct: 233 SWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSID 292

Query: 755 -----------TCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLSSDGLYQY 803
                        N+     F        PY++  P + +HRL   D+FLVL++DGL++ 
Sbjct: 293 LQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWET 352

Query: 804 FSNEEVVAHVTWFMENVPEGDPA 826
              ++VV  V  ++  +    P 
Sbjct: 353 MHRQDVVRIVGEYLTGMHHQQPI 375

PyMOL of 2pnq

>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467	Back alignment and structure

>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401	Back alignment and structure

>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401	Back alignment and structure

>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307	Back alignment and structure

>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307	Back alignment and structure

>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304	Back alignment and structure

>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304	Back alignment and structure

>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324	Back alignment and structure

>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316	Back alignment and structure

>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382	Back alignment and structure

>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382	Back alignment and structure

>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337	Back alignment and structure

>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377	Back alignment and structure

>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274	Back alignment and structure

>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274	Back alignment and structure

>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389	Back alignment and structure

>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389	Back alignment and structure

>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358	Back alignment and structure

>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		911
d1a6qa2		295	d.219.1.1 (A:2-296) Protein serine/threonine phosp	1e-07

>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (123), Expect = 1e-07
 Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 15/166 (9%)

Query: 677 MHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRV 736
           +         +N      +     +    + DH  S   E  RI+        +V   RV
Sbjct: 131 VLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG----SVMIQRV 186

Query: 737 KGQLKVTRAFGAGFLKKPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLSSSDRFLVLS 796
            G L V+RA G    K                V   P V  I      R    D+F++L+
Sbjct: 187 NGSLAVSRALGDFDYKCVHGK-----GPTEQLVSPEPEVHDI-----ERSEEDDQFIILA 236

Query: 797 SDGLYQYFSNEEVVAHVTWFMENVPE-GDPAQYLIAELLFRAAKKN 841
            DG++    NEE+   V   +E   +       ++   L++ ++ N
Sbjct: 237 CDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDN 282

PyMOL of d1a6qa2

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		911
d1a6qa2		295	Protein serine/threonine phosphatase 2C, catalytic	100.0
d1txoa_		235	putative serine/threonine phosphatase pstp/ppp {My	100.0
d1a6qa2		295	Protein serine/threonine phosphatase 2C, catalytic	96.47

>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=329.33  Aligned_cols=259  Identities=22%  Similarity=0.230  Sum_probs=205.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCHHHH-------CCCCCCHHHHHHHHHHHH
Q ss_conf             3665303334556666763117888279999964777237999999961510021-------179999789999999999
Q 002536          512 RQGTRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKC-------KSGIIDHDAVLRAMAQAL  584 (911)
Q Consensus       512 ~~~~r~~~~~~~~~~~~~k~k~~~~~~ffgVfDGHGG~~~~~s~~v~e~L~~~l~-------~sg~~d~e~Vl~AL~rAl  584 (911)
                      .||.|+.+++..+.... .........||+|||||||.  .++.++.+.++..+.       .......+.+.++|.++|
T Consensus        28 ~~G~R~~~ED~~~~~~~-~~~~~~~~~lf~V~DGhGG~--~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~al~~a~  104 (295)
T d1a6qa2          28 MQGWRVEMEDAHTAVIG-LPSGLESWSFFAVYDGHAGS--QVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGF  104 (295)
T ss_dssp             EEETSSSCCEEEEEEEE-ETTTEEEEEEEEEEEEESCS--HHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEECC-CCCCCCCEEEEEEEECCCCH--HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf             72188744370499705-68898760799999599981--8999999999999997554213456515899999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             99999999999997504986457994499999979959999845661999972799999999876554222342113566
Q 002536          585 ESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDDSRHKNRSRESLV  664 (911)
Q Consensus       585 ~~teealle~~~k~l~~npela~sGSTalVvLI~g~~LYVANVGDSRAIL~r~~~~~~~~~~~~~~~~~~~~~r~~~~~~  664 (911)
                      ..+++.+..+.+    ..+....||||++++++.++++|++||||||||+++.+                          
T Consensus       105 ~~~~~~~~~~~~----~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~--------------------------  154 (295)
T d1a6qa2         105 LEIDEHMRVMSE----KKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR--------------------------  154 (295)
T ss_dssp             HHHHHHHHHHHH----HTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT--------------------------
T ss_pred             HHHHHHHHHHHH----HCCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEECC--------------------------
T ss_conf             999988766554----04576779975999994288999995578769986034--------------------------


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC
Q ss_conf             66431001358765321000135566410110244249992546998839999999840999974021462048400123
Q 002536          665 RMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTR  744 (911)
Q Consensus       665 ~~~l~ri~eE~p~~~~~~~~~~~~~~~~~~~~~~~l~a~qLT~DHS~s~eeE~~RI~~egpdd~~~I~ndRVkG~L~VTR  744 (911)
                                                          .+.+||.||++.++.|++||...|    ..+...|++|.|.+||
T Consensus       155 ------------------------------------~~~~lT~dH~~~~~~E~~Ri~~~g----g~v~~~r~~g~l~~tR  194 (295)
T d1a6qa2         155 ------------------------------------KVHFFTQDHKPSNPLEKERIQNAG----GSVMIQRVNGSLAVSR  194 (295)
T ss_dssp             ------------------------------------EEEEECCCCCTTSHHHHHHHHHTT----CCEETTEETTTBSCSB
T ss_pred             ------------------------------------CCEEECCCCCCCCHHHHHHHHHCC----CCCCCCCCCCCEEEEE
T ss_conf             ------------------------------------401101456753187875676447----7410244388420113


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCEEEEEC-CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf             3478876797604778775451357999941216521499822-799499998674589789899999999855319999
Q 002536          745 AFGAGFLKKPTCNEALLEMFRVDYVGNAPYVSCIPSIVHHRLS-SSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEG  823 (911)
Q Consensus       745 AfGD~~LKqpk~N~~Lle~fri~yigt~PyIsaePdI~~~kL~-~~D~FLILASDGLwD~LSneEVv~iV~~~i~~~~~g  823 (911)
                      ||||..+|....           .....++|+++|+|..+.+. ++|+|||||||||||+|+++|++++|...+..  ..
T Consensus       195 a~Gd~~~k~~~~-----------~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~--~~  261 (295)
T d1a6qa2         195 ALGDFDYKCVHG-----------KGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEV--TD  261 (295)
T ss_dssp             CEECGGGSCCTT-----------CCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTT--CC
T ss_pred             CCCCHHHHHCCC-----------CCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC--CC
T ss_conf             167677640355-----------67543332444540488850140036766457543468999999999998646--89


Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCC
Q ss_conf             918999999999999981993001001454333452012101578876685688889846677
Q 002536          824 DPAQYLIAELLFRAAKKNDRRLLASHCCNLQLSFGEESEIRHFATGLYHVIATEQVLFFLLLS  886 (911)
Q Consensus       824 dpaq~LiaelL~raAkk~G~~~~~~~~~~~~~d~~eLl~ip~g~RRky~DDITVIVI~L~~~~  886 (911)
                      ++..  +++.|+..|..+|.                            +||||||||.|...+
T Consensus       262 ~~~~--~a~~Lv~~A~~~gs----------------------------~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         262 DLEK--VCNEVVDTCLYKGS----------------------------RDNMSVILICFPNAP  294 (295)
T ss_dssp             CHHH--HHHHHHHHHHHTTC----------------------------CSCEEEEEEECTTSC
T ss_pred             CHHH--HHHHHHHHHHHCCC----------------------------CCCEEEEEEECCCCC
T ss_conf             8999--99999999986499----------------------------888699999636889

PyMOL of d1a6qa2

>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure